BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048358
(541 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/544 (70%), Positives = 463/544 (85%), Gaps = 3/544 (0%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
MA RIGAL I+ELE+ FVPILQ+C+N++ELK IH ++KY LSQS+FLVTKM+DVC+
Sbjct: 1 MATRIGALKIRELENFFVPILQNCKNIVELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTE 60
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR--DPRTGSLILPDKF 118
DL YASLLFKQVKEPN +LYNAMIRA+T+N +Y LAI YK+MLR DP + + I PD+F
Sbjct: 61 DLGYASLLFKQVKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRF 120
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
T PFVIKSC+GL+C +LGKQ+HAH+CKFG KS+ ENAL+D+Y KC L++AHKVF+ M
Sbjct: 121 TFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGM 180
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+RD ++WN++ISG+ +GQM+KA LFD MPY TIVSWTAMISGYT +GSYA+AL VFR
Sbjct: 181 VERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFR 240
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
QMQ+VG+EPDEISI+SVLPACAQLG+LE+G+WIHMYCD+N LLR+T ICNAL+EMY KCG
Sbjct: 241 QMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCG 300
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
CI QA QLFDQM + DV+SWST+IGGLANHGKA +AI LF M++ K+ PN ITF+GLLS
Sbjct: 301 CIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLS 360
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
ACAH GFWNEGL YFDSM +D+HIE ++EHYGCLVD+LGRAGRL QAL++IE+MPMKPD+
Sbjct: 361 ACAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDS 420
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
KIWGSLLSSCRT+SNL+IA+IAMEHL LEP+DTGNYVLLSNIYA +W+ VSRMRKLI
Sbjct: 421 KIWGSLLSSCRTHSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLI 480
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKD-VIDIMYE 537
+SKSMKKTPG SLI++NN VQEFVS DD+KPF +DIFWLLELL HQD +I+IM E
Sbjct: 481 KSKSMKKTPGSSLIDINNVVQEFVSWDDSKPFSRDIFWLLELLTSHQDTTDPHLIEIMLE 540
Query: 538 DIGE 541
D E
Sbjct: 541 DGSE 544
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/540 (67%), Positives = 445/540 (82%), Gaps = 1/540 (0%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
MA ++ AL I+E+ED FVPIL++C N++ELKKIH I+K+ LSQS+FLVTKM+DVCN
Sbjct: 1 MARKLRALKIREMEDIFVPILKNCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHHA 60
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+ YA+LLFK+V +PN FLYNAMIRAY +N +Y LAI +YKQML + I PDKFT
Sbjct: 61 ETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTF 120
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PFV+KSCAGL+C LGKQ+H HV KFG KS+++ EN+L+++Y KCD L +AHKVFEEMT+
Sbjct: 121 PFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTE 180
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD V+WN LISG+ RLGQM++AR +F++M TI SWTA++SGY IG YA+AL+ FR+M
Sbjct: 181 RDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRM 240
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
QMVGIEPDEIS+VSVLPACAQLG+LELG+WIH Y DK LR +CNALIEMY KCG I
Sbjct: 241 QMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSI 300
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
++ +LFDQM ERDV+SWST+I GLANHG+AH+AI LF EMQ+ K+ PN ITF+GLLSAC
Sbjct: 301 DEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSAC 360
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
AH G NEGL YF+SMKRD++IE +EHYGCLV+LLG +GRLDQAL +I++MPMKPD+ I
Sbjct: 361 AHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAI 420
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
WGSLLSSCR++SNLEIAVIAMEHLL LEP DTGNYVLLSN+YA G+W+ VSRMRKL+RS
Sbjct: 421 WGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRS 480
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA-KDVIDIMYEDI 539
KSMKKTPGCS IEV+N VQEF SGDD+KPF K I+ +L+LL +HQ R D+I+IM DI
Sbjct: 481 KSMKKTPGCSSIEVDNMVQEFASGDDSKPFSKAIYRVLKLLVMHQRRMDDDIIEIMVHDI 540
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/516 (69%), Positives = 429/516 (83%), Gaps = 4/516 (0%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+ ELKK H ++KY LSQSNFLVTKMIDVC+ D+ YAS LFK+V +PN +LYNAMIRA
Sbjct: 1 MAELKKNHALVIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRA 60
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGS----LILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
T+N +Y L I+ YKQMLR+ R LILPD+FT PFV+K+CA L +LGKQ+HA
Sbjct: 61 CTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQ 120
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
KFG KSH ITENAL+D+Y KCD L++AH +F+EM +R ++WN +ISG+ RLGQM++A
Sbjct: 121 FFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRA 180
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R LFD+MP TIVSWTA+ISGYT IGSY +ALDVFR+MQ+ GIEPDE SI+SVLPACA+L
Sbjct: 181 RALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKL 240
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
G+LE G+WIHM+C +N LLRRT ICNALIEMY KCGCI+QA QLFDQM RDV+SWST+I
Sbjct: 241 GALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMI 300
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
GGLANHGK +AI +F M++ + PN ITF+GLLSACAH GFW EGLMYFD+MK+D HI
Sbjct: 301 GGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHI 360
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
E +IEHYG LVDLLGRAGRL QAL+I+E+MPMKPD+KIWGSLLSSCRT+ N+E+AVIAME
Sbjct: 361 EPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAME 420
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
HL LEP+DTGNYVLLSNIYA G+W+DVSRMRKL+RSK MKKTPGCSLIEVNN QEFV
Sbjct: 421 HLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQEFV 480
Query: 503 SGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYED 538
SGDD+KP+ K+IFWLLELLA HQD K +++I+ E+
Sbjct: 481 SGDDSKPYSKEIFWLLELLAFHQDMDKHILEIIPEN 516
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/539 (65%), Positives = 441/539 (81%), Gaps = 3/539 (0%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
MA ++ AL I+E+ED FVPIL+ C N++ELKKIH I+K+ LSQS+FLVTKM+DVCN G
Sbjct: 1 MARKLRALKIREMEDMFVPILKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYG 60
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+ YA+LLFK V +PN FLYNAMIRAY +N +Y LAI +YKQML +P + I PDKFT
Sbjct: 61 ETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTF 120
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PFV+KSCAGL+C LGKQ+H HV KFG KS+++ EN+L+++Y KCD L +AH+VFEEMT+
Sbjct: 121 PFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTE 180
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD V+WN LISG+ RLGQM++AR +F++M TI SWTA++SGY IG YA+AL+ FR+M
Sbjct: 181 RDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRM 240
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
QMVGIEPDEIS+VSVLP CAQLG+LELG+WIH+Y DK LR +CNALIEMY KCG I
Sbjct: 241 QMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSI 300
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+Q +LFDQM ERDV+SWST+I GLANHG+A +AI LF EMQ+ K+ P+ ITF+GLL+AC
Sbjct: 301 DQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTAC 360
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
AH G NEGL YF+SMKRD++IE +EHYGCLV+LLG +GRLDQAL ++++MP KPD+ I
Sbjct: 361 AHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPI 420
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
WGSLLSSCR++ NL+IAVIAMEHLL LEP DTGNYVLLSN+YA G+W+ VSRMRKL+RS
Sbjct: 421 WGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRS 480
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539
KSMKKTPGCS IEV+N VQEF SGDD+KPF K I +L+LL +HQ + +I+IM DI
Sbjct: 481 KSMKKTPGCSSIEVDNMVQEFASGDDSKPFSKAICRVLKLLVMHQSK---IIEIMVHDI 536
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/534 (62%), Positives = 436/534 (81%), Gaps = 5/534 (0%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
+ ++ELE+RFV L++C + ELKKIH I+K LSQSNFLVTKM+D+C++ + YA++
Sbjct: 1 MGVRELENRFVTTLRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATM 60
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F+Q++ PNVF YNA+IR YT+NH + LAI ++ QML T PDKFT PFVIKSC
Sbjct: 61 IFQQLENPNVFSYNAIIRTYTHNHKHPLAITVFNQML----TTKSASPDKFTFPFVIKSC 116
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
AGLLC LG+Q+HAHVCKFG K+H+ITENAL+D+Y KC ++ A++V+EEMT+RD V+WN
Sbjct: 117 AGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWN 176
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+LISG+ RLGQMK AR +FD+MP TIVSWT MI+GY G YA+AL +FR+MQ+VGIEP
Sbjct: 177 SLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEP 236
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
DEIS++SVLPACAQLG+LE+G+WIH Y +K+ L+ + NAL+EMY KCGCI++A LF
Sbjct: 237 DEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLF 296
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
+QM+E+DV+SWST+IGGLANHGK + AI +F +MQ+ V PN +TF+G+LSACAH G WN
Sbjct: 297 NQMIEKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWN 356
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EGL YFD M+ D+H+E +IEHYGCLVDLLGR+G+++QAL+ I +MPM+PD++ W SLLSS
Sbjct: 357 EGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSS 416
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR + NLEIAV+AME LL LEPE++GNYVLL+NIYAK +WE VS +RKLIRSK +KKTP
Sbjct: 417 CRIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTP 476
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDIGE 541
GCSLIEVNN VQEFVSGDD+KPF +++FW+L+ L LHQ R KD I+ + ED G+
Sbjct: 477 GCSLIEVNNLVQEFVSGDDSKPFSQEVFWILKGLTLHQIRTKDFIEFV-EDAGQ 529
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/534 (61%), Positives = 428/534 (80%), Gaps = 2/534 (0%)
Query: 5 IGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
+ + I+ELE+R++ L++C + +LKKIH ++K LSQSNFLVTKM+D C++ G ++Y
Sbjct: 1 MATIFIRELENRYITSLKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSY 60
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A+LLFKQ+ PN+F YNA+IR Y +N + AI+++ QML + + + PDKFT PFVI
Sbjct: 61 ATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQML--THSTNSVFPDKFTFPFVI 118
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
KSC G+LC LG Q+H V KFG H ITENAL+D+Y K +L A KVFEEM+ RD++
Sbjct: 119 KSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVI 178
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+WN+LI GY +LGQM AR LFD MP TIVSWT MI+GY +G Y +ALDVFR+MQMVG
Sbjct: 179 SWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVG 238
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
IEPDEISI++VLPACAQLG+LE+G+WIHMY DKN LR+T ICNALIEMY KCGCI++A
Sbjct: 239 IEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAW 298
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
LFDQ+VE+DV+SWST+IGGLANHGK ++AI LF EM +++V PN+ITF+G+L AC+HTG
Sbjct: 299 NLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTG 358
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
W+EGL YFD M +HIE +IEHYGCL+DLLGR+G L QAL+ I +MP+KPD++IW SL
Sbjct: 359 LWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSL 418
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LSSCR + NL+IAVIA++ L+ LEPE++GNYVLL+N+YA+HG+WEDVS +RKLIR+K +K
Sbjct: 419 LSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIK 478
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYED 538
KTPG S IEVNN VQEFVS DD+KPF +++FW+LE LAL+Q R D+++ + ED
Sbjct: 479 KTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWILEGLALNQTRTNDLMEPVEED 532
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/524 (62%), Positives = 417/524 (79%), Gaps = 6/524 (1%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
I+E+E+ F+P LQ ++ E KKI+ I+ + LSQS+F+VTKM+D C+ D+ YA+ L
Sbjct: 5 GIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRL 64
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F QV PNVFLYN++IRAYT+N LY I +YKQ+LR S LPD+FT PF+ KSCA
Sbjct: 65 FNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRK----SFELPDRFTFPFMFKSCA 120
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
L LGKQ+H H+CKFG + H +TENAL+D+Y K D+L++AHKVF+EM +RD+++WN+
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L+SGYARLGQMKKA+ LF M TIVSWTAMISGYT IG Y EA+D FR+MQ+ GIEPD
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
EIS++SVLP+CAQLGSLELG+WIH+Y ++ L++T +CNALIEMY KCG I+QA QLF
Sbjct: 241 EISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG 300
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
QM +DV+SWST+I G A HG AH AI F+EMQR KV PN ITF+GLLSAC+H G W E
Sbjct: 301 QMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQE 360
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
GL YFD M++D+ IE KIEHYGCL+D+L RAG+L++A+ I + MPMKPD+KIWGSLLSSC
Sbjct: 361 GLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSC 420
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
RT NL++A++AM+HL+ LEPED GNYVLL+NIYA G+WEDVSR+RK+IR+++MKKTPG
Sbjct: 421 RTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG 480
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVI 532
SLIEVNN VQEFVSGD++KPF +I +L+L HQD +DVI
Sbjct: 481 GSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQD--QDVI 522
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/538 (62%), Positives = 415/538 (77%), Gaps = 36/538 (6%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA 63
++ AL I+E+ED FVPIL+ C N++ELKKIH I+K+ LSQS+FLVTKM+DVCN G+
Sbjct: 49 KLRALKIREMEDMFVPILKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETE 108
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
YA+LLFK V +PN FLYNAMIRAY +N +Y LAI +YKQML +P + I PDKFT PFV
Sbjct: 109 YANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFV 168
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD- 182
+KSCAGL+C LGKQ+H HV KFG KS+++ EN+L+++Y KCD L +AH+VFEEMT+RD
Sbjct: 169 VKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDA 228
Query: 183 -IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
I +W ++SGYAR IG YA+AL+ FR+MQ
Sbjct: 229 TIFSWTAIVSGYAR-------------------------------IGCYADALEFFRRMQ 257
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
MVGIEPDEIS+VSVLP CAQLG+LELG+WIH+Y DK LR +CNALIEMY KCG I+
Sbjct: 258 MVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSID 317
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
Q +LFDQM ERDV+SWST+I GLANHG+A +AI LF EMQ+ K+ P+ ITF+GLL+ACA
Sbjct: 318 QGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACA 377
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G NEGL YF+SMKRD++IE +EHYGCLV+LLG +GRLDQAL ++++MP KPD+ IW
Sbjct: 378 HAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIW 437
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
GSLLSSCR++ NL+IAVIAMEHLL LEP DTGNYVLLSN+YA G+W+ VSRMRKL+RSK
Sbjct: 438 GSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSK 497
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539
SMKKTPGCS IEV+N VQEF SGDD+KPF K I +L+LL +HQ + +I+IM DI
Sbjct: 498 SMKKTPGCSSIEVDNMVQEFASGDDSKPFSKAICRVLKLLVMHQSK---IIEIMVHDI 552
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/523 (61%), Positives = 418/523 (79%), Gaps = 6/523 (1%)
Query: 10 IKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLF 69
I+E+E+ F+P LQ ++ E KKIH I+ + LSQS+F+VTKM+D+C+ GD+ YA+ LF
Sbjct: 6 IREVENYFIPFLQRVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLF 65
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
QV PNVFLYN++IRAYT+N LY I +YKQ+LR ++ PD+FT PF+ KSCA
Sbjct: 66 NQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRK----TIEFPDRFTFPFMFKSCAS 121
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L LGKQ+H H+ KFG + H +TENAL+D+Y K D+L++AHKVF+EM++RD+++WN+L
Sbjct: 122 LGSCYLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSL 181
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+SGYARLGQMKKA+ LF M TIVSWTAMISGYT IG Y EA+D FR+MQ+ GIEPDE
Sbjct: 182 LSGYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDE 241
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
IS++SVLP+CA LGSLELG+WIHMY ++ LL++T +CNALIEMY KCG ++QA QLF+Q
Sbjct: 242 ISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQ 301
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
+DV+SWST+I G A HG AH+A F EMQR KV PN ITF+GLLSAC+H G W +G
Sbjct: 302 TKGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQG 361
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
L YFD M++D+ IE KIEHYGCL+D+L RAG+L++A+ I + MP+KPD+KIWGSLLSSCR
Sbjct: 362 LKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCR 421
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
T NL++A++AM+HL+ +EP+D GNYVLL+NIYA G+WEDVSR+RK+IR ++MKKTPGC
Sbjct: 422 TKGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGC 481
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVI 532
SLIEVNN VQEFV+GD++KPF +I +L+L HQD +DVI
Sbjct: 482 SLIEVNNIVQEFVAGDNSKPFWTEISLVLQLFTSHQD--QDVI 522
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/514 (62%), Positives = 408/514 (79%), Gaps = 1/514 (0%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
++ELKKIH ++K+ LS S+FLVTKM+D+CN G+ YA+LLFK+V +PN FLYNAMIRA
Sbjct: 1 MVELKKIHAHVVKFSLSXSSFLVTKMVDMCNHHGETEYANLLFKRVADPNAFLYNAMIRA 60
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
Y +N +Y LAI ++KQML + PDKFT PFV+K CAGL+C +LGKQ+H H KF
Sbjct: 61 YKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAFKF 120
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
G KS+++ EN+L+++Y KCD L +AH+VFEEMT+RD V+WN LISG+ RLGQM++AR +F
Sbjct: 121 GPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIF 180
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
+++ TI SWTA++SGY IG +A AL+ FR+MQMV IE DEIS+VSVLPACAQLG+LE
Sbjct: 181 EELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGALE 240
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
LG+WIH+Y DK LR +CNALIE+Y K G +++ +LF +M ERDV+SWST+I GLA
Sbjct: 241 LGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVGLA 300
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
NHG+A +AI LF EMQ+ KV PN ITF+GLLSACAH G NEGL YF+SM+RD +IE +
Sbjct: 301 NHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDNIEPGV 360
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
EHYGCLV+LLG +GRLDQAL +I++MPMKPD+ IWG L SSCR++ NLEI IAMEHLL
Sbjct: 361 EHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIAMEHLLE 420
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
LEP+DTGNY+ LSN+YA G+W+ VSRMRKL+ SK M KTPGCS IEV+N VQE+ SGDD
Sbjct: 421 LEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIEVDNMVQEYASGDD 480
Query: 507 TKPFLKDIFWLLELLALHQDRA-KDVIDIMYEDI 539
+KPF K I+ +L+LL +HQ + D+I+IM DI
Sbjct: 481 SKPFSKAIYRVLKLLVMHQSKMDDDIIEIMVHDI 514
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 278/534 (52%), Positives = 394/534 (73%), Gaps = 5/534 (0%)
Query: 5 IGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
+ A S+ +LED + L++C +L + H ++ LSQS+++ T+++ VCN G A+
Sbjct: 1 MAAPSLWQLEDAAIARLRACATFRDLLRAHGLAVRLCLSQSSYVATQIVHVCNGHGRAAH 60
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR---DPRT-GSLILPDKFTL 120
A+ +F V PN+ L+NAMI+AY NHL+ A+ +Y +MLR DP + G + D+FT
Sbjct: 61 AARVFAHVPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTY 120
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PF++K+C GL LG+Q+HAHV + G +SH+I +N+L+++Y +C +L A KVF+ M +
Sbjct: 121 PFLLKACGGLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMRE 180
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
+D V+WN LIS +AR+GQM+KAR LF MP T+VSWTA++SGYT +G +A A++VFRQM
Sbjct: 181 KDAVSWNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQM 240
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
QM G EPD++SIV+VLPACAQLG+LELG WI+ YC+K+ +L + ICNAL+EMY KCGCI
Sbjct: 241 QMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCI 300
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSA 359
+A QLF M E+DV+SWST IGGLA HG+A +A+ LF M R +V PN ITF+GLLSA
Sbjct: 301 EEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSA 360
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H G +EGL YFD MK ++ +E +EHYGC+VDLLGR+GR+ +AL+ I MP+ PD K
Sbjct: 361 CSHAGLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGK 420
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IWGSLLS+CR++S+++ AV+A E L+ LEPED GN V+L+N+YA GRW +V+ RK IR
Sbjct: 421 IWGSLLSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIR 480
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
S+S +KTPGCS+IEV+N V+EFV+G+D P L I ++++LA ++++D
Sbjct: 481 SRSTRKTPGCSMIEVDNVVREFVAGEDLGPELGGIAAIIDILASQLADDEELVD 534
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 266/517 (51%), Positives = 390/517 (75%), Gaps = 3/517 (0%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
+ +++ED + L++C + +L ++H ++ LSQS++L T+++ +CN+ G +A+A+ +
Sbjct: 8 ATRQVEDAVMASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRV 67
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTG--SLILPDKFTLPFVIKS 126
F QV+EPN+ L+NAMI+AY NH + AI +Y +MLR S D+FT PF++K+
Sbjct: 68 FSQVREPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKA 127
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
C GL+ LGKQ+H HV + G +S++I +N+L+++Y + +L+ A KVF+ M +RD+V+W
Sbjct: 128 CGGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSW 187
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
N +IS +ARLGQM+KAR +F+ MP T+VSWTA++SGYT G ++ A++ FR MQM G E
Sbjct: 188 NTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFE 247
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD++SIV+VLPACAQLG+LELG WI+ YC+++ +LR T +CNAL+EMY KCGCI+QA QL
Sbjct: 248 PDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQL 307
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGF 365
F+ M E+DV+SWST++GGLA HG+A +A+ LF EM+R V PN ITF+GLLSAC+H G
Sbjct: 308 FNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGL 367
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+EGL YFD M + IE +EHYGC+VDLL R+G++ + L++I +MP+ DAKIWGS+L
Sbjct: 368 LDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVL 427
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
++CR++ +++ AV+A E L+ LEPED GN V+L+N+YA RW +V+ RK IRS+SM+K
Sbjct: 428 NACRSHGDVDTAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRK 487
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
TPGCSLIEV+N VQEFV+G+D KP + +L++LA
Sbjct: 488 TPGCSLIEVDNVVQEFVAGEDLKPEFGGLSGVLDILA 524
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 272/537 (50%), Positives = 387/537 (72%), Gaps = 8/537 (1%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
MAAR S+ +LED + L++C +L + H ++ LSQS+++ T+++ +CN+ G
Sbjct: 1 MAAR----SLWQLEDAIIARLRTCATFRDLLRAHGLAVRLCLSQSSYVATQIVHICNAHG 56
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR---DPRTGSLILPDK 117
A+A+ +F Q+ PN+ L+NAMI+AY NHL+ A+ +Y +MLR P T + D+
Sbjct: 57 RAAHAARVFAQIPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDR 116
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
FT PF++K+C L LG+Q+HAHV + G +SH++ +N+L+++Y +C +L A K F+
Sbjct: 117 FTYPFLLKACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDG 176
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M ++D+V+WN LIS +AR+GQM++AR LF MP T+VSWTA++SGYT +G + A++VF
Sbjct: 177 MREKDVVSWNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVF 236
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
R MQM G EPD++SIV+VLPACAQLG+LELG WI+ YC K+ +L + ICNAL+EMY KC
Sbjct: 237 RLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKC 296
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGL 356
GCI +A QLF M E+DV+SWST IGGLA HG+A +A+ LF M R +V PN ITF+GL
Sbjct: 297 GCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGL 356
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
LSAC+H G +EGL Y D MK D+ +E +EHYGC+VDLLGR+GR+ +AL+ I MP+ P
Sbjct: 357 LSACSHAGLVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPP 416
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
D KIWGSLLS+CR++ ++E AV+A E L+ LEP D GN V+L+N+Y GRW +V+ RK
Sbjct: 417 DGKIWGSLLSACRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRK 476
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
IRS+S +KTPGCS+IEV+N V+EFV+G D P L I +L++LA ++++D
Sbjct: 477 EIRSRSTRKTPGCSMIEVDNVVREFVAGQDLGPELGGIATVLDILASKLADDEELVD 533
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/531 (51%), Positives = 389/531 (73%), Gaps = 5/531 (0%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
++LED + L++C +L ++H +++ +SQS++L T+++ +CN+ + +A+ +F
Sbjct: 11 RQLEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFA 70
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT--GSLILPDKFTLPFVIKSCA 128
QV++PN+ L+NAMI+AY NH + A+ +Y +MLR P + D+FT PF++K+C
Sbjct: 71 QVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG 130
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
G LGKQ+H HV + G S +I +N+L+++Y + +L AHKVF+EM +RD+V+WN
Sbjct: 131 GTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNM 190
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
LIS +ARLGQM+KA LF+ MP TIV+WTAM+SGYT +G Y A+D FR MQ G EPD
Sbjct: 191 LISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPD 250
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++SIV+VLPACAQLG+LELG WI+ YC ++ +L T ICNAL+EMY KCGCI+QA QLFD
Sbjct: 251 DVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFD 310
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGFWN 367
M ++DV+SWSTVIGGLA HG+AH+A+ LF EM++ KV PN ITF+GLLSAC++ G +
Sbjct: 311 GMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVD 370
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EGL +FD M + +E +EHYGC+VDLLGR+G++ +AL+++ +MP+ DAK+WGSLLS+
Sbjct: 371 EGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSA 430
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR++ +++ AV+A E L+ LEP+D GN V+L+N+YA RW DV+ RK IRS+SM+KTP
Sbjct: 431 CRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTP 490
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYED 538
GCSLIEV N V+EFV+G+ L + +L++LA H A D DI + D
Sbjct: 491 GCSLIEVGNVVREFVAGEGLSSELGGLAGVLDILASHL--ADDEEDIDFAD 539
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/530 (51%), Positives = 388/530 (73%), Gaps = 5/530 (0%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
+LED + L++C +L ++H +++ +SQS++L T+++ +CN+ + +A+ +F Q
Sbjct: 12 QLEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQ 71
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT--GSLILPDKFTLPFVIKSCAG 129
V++PN+ L+NAMI+AY NH + A+ +Y +MLR P + D+FT PF++K+C G
Sbjct: 72 VRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGG 131
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
LGKQ+H HV + G S +I +N+L+++Y + +L AHKVF+EM +RD+V+WN L
Sbjct: 132 TAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNML 191
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
IS +ARLGQM+KA LF+ MP TIV+WTAM+SGYT +G Y A+D FR MQ G EPD+
Sbjct: 192 ISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDD 251
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+SIV+VLPACAQLG+LELG WI+ YC ++ +L T ICNAL+EMY KCGCI+QA QLFD
Sbjct: 252 VSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDG 311
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGFWNE 368
M ++DV+SWSTVIGGLA HG+AH+A+ LF EM++ KV PN ITF+GLLSAC++ G +E
Sbjct: 312 MADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDE 371
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
GL +FD M + +E +EHYGC+VDLLGR+G++ +AL+++ +MP+ DAK+WGSLLS+C
Sbjct: 372 GLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSAC 431
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R++ +++ AV+A E L+ LEP+D GN V+L+N+YA RW DV+ RK IRS+SM+KTPG
Sbjct: 432 RSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYED 538
CSLIEV N V+EFV+G+ L + +L++LA H A D DI + D
Sbjct: 492 CSLIEVGNVVREFVAGEGLSSELGGLAGVLDILASHL--ADDEEDIDFAD 539
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/530 (51%), Positives = 388/530 (73%), Gaps = 5/530 (0%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
+LED + L++C +L ++H +++ +SQS++L T+++ +CN+ + +A+ +F Q
Sbjct: 12 QLEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQ 71
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT--GSLILPDKFTLPFVIKSCAG 129
V++PN+ L+NAMI+AY NH + A+ +Y +MLR P + D+FT PF++K+C G
Sbjct: 72 VRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGG 131
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
LGKQ+H HV + G S +I +N+L+++Y + +L AHKVF+EM +RD+V+WN L
Sbjct: 132 TAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNML 191
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
IS +ARLGQM+KA LF+ MP TIV+WTAM+SGYT +G Y A+D FR MQ G EPD+
Sbjct: 192 ISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDD 251
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+SIV+VLPACAQLG+LELG WI+ YC ++ +L T ICNAL+EMY KCGCI+QA QLFD
Sbjct: 252 VSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDG 311
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGFWNE 368
M ++DV+SWSTVIGGLA HG+AH+A+ LF EM++ KV PN ITF+GLLSAC++ G +E
Sbjct: 312 MADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDE 371
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
GL +FD M + +E +EHYGC+VDLLGR+G++ +AL+++ +MP+ DAK+WGSLLS+C
Sbjct: 372 GLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSAC 431
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R++ +++ AV+A E L+ LEP+D GN V+L+N+YA RW DV+ RK IRS+SM+KTPG
Sbjct: 432 RSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYED 538
CSLIEV N V+EFV+G+ L + +L++LA H A D DI + D
Sbjct: 492 CSLIEVGNVVREFVAGEGLSSELGGLAGVLDILASHL--ADDEEDIDFAD 539
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/518 (42%), Positives = 324/518 (62%), Gaps = 13/518 (2%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL---AYASL 67
K LE R + IL C ++K++H I++ LSQ ++++TK+I + D+ +Y L
Sbjct: 39 KLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLL 97
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F QV PN FL+ AMIR Y L + N Y +M RD + P FT + K+C
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDG-----VGPVSFTFSALFKAC 152
Query: 128 AGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
L LGKQ+HA G S N+++DLY KC L A KVF+EM++RD+V+W
Sbjct: 153 GAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSW 212
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
LI YA+ G M+ A LFD +P +V+WTAM++GY G EAL+ F++MQ VG+E
Sbjct: 213 TELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGME 272
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL--LRRTVICNALIEMYIKCGCINQAS 304
DE+++ V+ ACAQLG+++ WI +++ V+ +ALI+MY KCG ++A
Sbjct: 273 TDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAY 332
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++F+ M ER+V S+S++I G A HG+AH A+ LFH+M + ++ PN +TFIG+LSAC+H G
Sbjct: 333 KVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAG 392
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+G F M++ + +HY C+VDLLGRAG L++AL++++ MPM+P+ +WG+L
Sbjct: 393 LVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGAL 452
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L +CR + N +IA IA L LEP GNY+LLSNIYA GRWE+VS++RK+IR K K
Sbjct: 453 LGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFK 512
Query: 485 KTPGCSLIE-VNNEVQEFVSGDDTKPFLKDIFWLLELL 521
K PGCS E N E+ +F +GD T P +I L+ L
Sbjct: 513 KNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQL 550
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/518 (42%), Positives = 324/518 (62%), Gaps = 13/518 (2%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL---AYASL 67
K LE R + IL C ++K++H I++ LSQ ++++TK+I + D+ +Y L
Sbjct: 39 KLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLL 97
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F QV PN FL+ AMIR Y L + N Y +M RD + P FT + K+C
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDG-----VGPVSFTFSALFKAC 152
Query: 128 AGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
L LGKQ+HA G S N+++DLY KC L A KVF+EM++RD+V+W
Sbjct: 153 GAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSW 212
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
LI YA+ G M+ A LFD +P +V+WTAM++GY G EAL+ F++MQ VG+E
Sbjct: 213 TELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGME 272
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL--LRRTVICNALIEMYIKCGCINQAS 304
DE+++ V+ ACAQLG+++ WI +++ V+ +ALI+MY KCG ++A
Sbjct: 273 TDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAY 332
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++F+ M ER+V S+S++I G A HG+AH A+ LFH+M + ++ PN +TFIG+LSAC+H G
Sbjct: 333 KVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAG 392
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+G F M++ + +HY C+VDLLGRAG L++AL++++ MPM+P+ +WG+L
Sbjct: 393 LVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGAL 452
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L +CR + N +IA IA L LEP GNY+LLSNIYA GRWE+VS++RK+IR K K
Sbjct: 453 LGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFK 512
Query: 485 KTPGCSLIE-VNNEVQEFVSGDDTKPFLKDIFWLLELL 521
K PGCS E N E+ +F +GD T P +I L+ L
Sbjct: 513 KNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQL 550
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/502 (41%), Positives = 319/502 (63%), Gaps = 5/502 (0%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ +L+ C NL L + H +L L Q N L+++ I+ C+S G Y+ +F P+
Sbjct: 44 LLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPD 103
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++LYN +I+A +N L AI LY ++L S + D ++LPFV+K+ LL +G
Sbjct: 104 IYLYNTIIKALSNPELATEAILLYNRIL-----ASDLRFDTYSLPFVLKAVVRLLAIHVG 158
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+QIH GL S AL+ +Y C + EA ++F+ + RD+ WN +++GYA++
Sbjct: 159 RQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKV 218
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + AR LF++MP ++SWTA+I+GY + EA+ +FR+MQ+ +EPDEI++++ L
Sbjct: 219 GDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAAL 278
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA LG+LELGEWIH Y DK+ L + + NALI+MY KCG I +A ++F M + V+
Sbjct: 279 SACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVI 338
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+++I GLA HG +A+ +F M+R ++ PN+ITF+ +LSAC H G G YF M
Sbjct: 339 TWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCM 398
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ I+ KI+HYGC++DLLGRAG L +A ++ MP + +A IWGSLL++ R + + E+
Sbjct: 399 GTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAEL 458
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A++HL+ +EP ++GNY LLSNIYA +W + +RK++R +KK PG S IEVNN
Sbjct: 459 GKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNN 518
Query: 497 EVQEFVSGDDTKPFLKDIFWLL 518
V EFV+GD P + IF +L
Sbjct: 519 RVHEFVAGDKLHPQSERIFEVL 540
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/521 (41%), Positives = 322/521 (61%), Gaps = 24/521 (4%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQ 71
E+ + + ++C+++ LK+IH++ +K + + + K++ C S GD+ YA LF
Sbjct: 14 ENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDT 73
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ EP+VF +N M + Y+ L ++LY +ML + PD +T PF+ K +
Sbjct: 74 IPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERN-----VKPDCYTYPFLFKGFTRSV 128
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
LG+++H HV K+GL S+ NAL+++Y C + A +F+ D+V WN +IS
Sbjct: 129 ALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMIS 188
Query: 192 GYARL-----------------GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
GY R+ GQ+ AR F KMP VSWTAMI GY + Y EAL
Sbjct: 189 GYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEAL 248
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+FR+MQ I+PDE ++VSVL ACAQLG+LELGEWI Y DKN + T + NALI+MY
Sbjct: 249 MLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMY 308
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
KCG + A +F+ + +RD +W+ ++ GLA +G +A+++F +M + V P+++T++
Sbjct: 309 FKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYV 368
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM 414
G+LSAC HTG +EG +F SM H IE I HYGC+VDLLG+AG L +A II+ MPM
Sbjct: 369 GVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPM 428
Query: 415 KPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRM 474
KP++ +WG+LL +CR + + E+A A+E +L LEP + YVL NIYA +W+ + +
Sbjct: 429 KPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLREL 488
Query: 475 RKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
R+++ + +KKTPGCSLIE+N V EFV+GD + P K+I+
Sbjct: 489 RQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIY 529
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/502 (41%), Positives = 319/502 (63%), Gaps = 5/502 (0%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ +L+ C NL L + H +L L Q N L+++ I+ C+S G Y+ +F P+
Sbjct: 44 LLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPD 103
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++LYN +I+A +N L AI LY ++L S + D ++LPFV+K+ LL +G
Sbjct: 104 IYLYNTIIKALSNPELATEAILLYNRIL-----ASDLRFDTYSLPFVLKAVVRLLAIHVG 158
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+QIH GL S AL+ +Y C + EA ++F+ + RD+ WN +++GYA++
Sbjct: 159 RQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKV 218
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + AR LF++MP ++SWTA+I+GY + EA+ +FR+MQ+ +EPDEI++++ L
Sbjct: 219 GDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAAL 278
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA LG+LELGEWIH Y DK+ L + + NALI+MY KCG I +A ++F M + V+
Sbjct: 279 SACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVI 338
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+++I GLA HG +A+ +F M+R ++ PN+ITF+ +LSAC H G G YF M
Sbjct: 339 TWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCM 398
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ I+ KI+HYGC++DLLGRAG L +A ++ MP + +A IWGSLL++ R + + E+
Sbjct: 399 GTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAEL 458
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A++HL+ +EP ++GNY LLSNIYA +W + +RK++R +KK PG S IEVNN
Sbjct: 459 GKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNN 518
Query: 497 EVQEFVSGDDTKPFLKDIFWLL 518
V EFV+GD P + IF +L
Sbjct: 519 RVHEFVAGDKLHPQSERIFEVL 540
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/520 (40%), Positives = 326/520 (62%), Gaps = 8/520 (1%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NS 58
M A +G+ +K R + +L C + +K+I + + F ++I C ++
Sbjct: 1 MLASVGSKYLKS-SRRVLSLLDQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSA 59
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
GD+++A LLF + F++N M+RA+T+ ++LYK ML TG LP+ +
Sbjct: 60 QGDISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLS---TG--FLPNNY 114
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
T F++++CA L S G +HA + G +++ +N LL LY C+ + A ++F+
Sbjct: 115 TFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGS 174
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+RD+V W +I+GYA+ GQ+ AR LFD+MP VSW+AMI+GY IG + EAL++F
Sbjct: 175 VNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFN 234
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
MQ+ G P+ +IV L ACA LG+L+ G WIH Y D+N ++ ++ ALI+MY KCG
Sbjct: 235 DMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCG 294
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
C+ A ++FD+M++RDV +++++I GLANHG + AI +F MQ V PN++TFI LLS
Sbjct: 295 CVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLS 354
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+ G EGL F SM + IE ++HYGCLVDLLGRAG L+ A ++ EMP++PD+
Sbjct: 355 ACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDS 414
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
+ G+LL++CR + ++E+ +E L + G +VLLSN+YA +WEDV+++RK +
Sbjct: 415 YVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGM 474
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
K +KK PGCSLIEV+ V EFV+GD + F+ +I LL
Sbjct: 475 EEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLL 514
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/503 (40%), Positives = 322/503 (64%), Gaps = 5/503 (0%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
+F +L +C + + L +IH +L L Q N +++ ID C S G +YA +F P
Sbjct: 26 QFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHP 85
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
++ LYN I+A + AI LY ++ D + PD +++P V+K+ L +
Sbjct: 86 DLRLYNTAIKALSKTSSPINAIWLYTRIRIDG-----LRPDSYSIPSVLKAVVKLSAVEV 140
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+QIH L +L+ +Y C + +A K+F+ + +D+ WN +++GY +
Sbjct: 141 GRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVK 200
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
+G++K AR +F++MP ++SWT +I+GY EA+++FR+MQ+ +EPDEI++++V
Sbjct: 201 VGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAV 260
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L ACA LG+LELGEWIH Y +K+ L R + NALI+MY K G I +A ++F+ M ++ V
Sbjct: 261 LSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSV 320
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
++WSTVI LA HG +AI +F M++ KV PN++TF+ +LSAC+H G + G YFD
Sbjct: 321 ITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQ 380
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+ + IE KIEHYGC++DLL RAG L +A ++ +MP + +A IWGSLL++ T+ + E
Sbjct: 381 MQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAE 440
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A +A++HL LEP ++GNYVLLSN YA G+W + +RKL+R+ +KK PG S+IE+N
Sbjct: 441 LAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSVIEIN 500
Query: 496 NEVQEFVSGDDTKPFLKDIFWLL 518
N V EF++GD + + +I+ +L
Sbjct: 501 NIVYEFLAGDMSDSQVHEIYHVL 523
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/518 (41%), Positives = 320/518 (61%), Gaps = 13/518 (2%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA---YASL 67
K LE R V +L C ++ ++K++H I + L Q F++ K++ D+ Y L
Sbjct: 36 KILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKL-DVPMDPYPRL 94
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F+QV+ PN FL+ A+IR Y + ++ LY M R I P FT ++K+C
Sbjct: 95 VFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQG-----IGPVSFTFTALLKAC 149
Query: 128 AGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
+ L +LG+Q+H G S N L+D+Y KC L H+VF+EM DRD+++W
Sbjct: 150 SAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISW 209
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
+LI YA++G M+ A LFD +P +V+WTAM++GY EAL+VF +MQ G++
Sbjct: 210 TSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVK 269
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL--LRRTVICNALIEMYIKCGCINQAS 304
DE+++V V+ ACAQLG+ + W+ +++ V+ +ALI+MY KCG + A
Sbjct: 270 TDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAY 329
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++F++M ER+V S+S++I G A HG A A+ LF EM + ++ PN +TFIG+L+AC+H G
Sbjct: 330 KVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAG 389
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+G F M+ H + +HY C+VDLLGRAGRL++ALN+++ MPM P +WG+L
Sbjct: 390 MVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGAL 449
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L +CR + N ++A IA HL LEP GNY+LLSNIYA GRW+DVS++RKL+R+K +K
Sbjct: 450 LGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLK 509
Query: 485 KTPGCSLIEVNNE-VQEFVSGDDTKPFLKDIFWLLELL 521
K PGCS +E + EF +GD + P ++I LE L
Sbjct: 510 KNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDL 547
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/503 (40%), Positives = 318/503 (63%), Gaps = 4/503 (0%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS-GGDLAYASLLFKQVKEPNVFLY 80
++C ++ +L+KIH Q++K L++ ++++ C S GD+ YA L+F Q++ PN+F++
Sbjct: 4 KNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVW 63
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N +IR ++ + AI+L+ M+ T P + T P V K+ A L G Q+H
Sbjct: 64 NTIIRGFSQSSTPHNAISLFIDMMF---TSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLH 120
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
V K GL++ +N +L++Y C L EA ++F+ T D+V WN +I G A+ G++
Sbjct: 121 GRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEID 180
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
K+R LFDKM VSW +MISGY G + EA+++F +MQ GI+P E ++VS+L ACA
Sbjct: 181 KSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACA 240
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
LG+L GEWIH Y KN+ +++ A+I+MY KCG I++A Q+F ++ + W++
Sbjct: 241 CLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNS 300
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
+I GLA G+ ++A+ LF +++ + P+ ++FIG+L+AC H G + YF M +
Sbjct: 301 LILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETY 360
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
IE I+HY C+VD+LGRAG L++A +I+ MP+ PDA IWGSLLSSCR Y N+E+A A
Sbjct: 361 KIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQA 420
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQE 500
+ + L+P ++ +++LLSN+YA H +E+ R ++ K M K PGCSLIEVN EV E
Sbjct: 421 AKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEVHE 480
Query: 501 FVSGDDTKPFLKDIFWLLELLAL 523
FV+G P KDI+ L+ L L
Sbjct: 481 FVAGGRLHPRSKDIYHALDDLGL 503
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/502 (42%), Positives = 315/502 (62%), Gaps = 5/502 (0%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L + + ELK++H +LK S+ ++++ VC +YA L+F+ + V
Sbjct: 21 LLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTH 80
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +R++ AI+L+ + LR+ I PD +T FV+K+C+ LL GK +
Sbjct: 81 WNTCLRSFAEGDSPADAISLFYR-LREFD----ISPDHYTCSFVLKACSRLLDVRNGKIV 135
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H +V K GL+S+ +N ++ LY C E+ A KVF++M RD++ WN +I+ ++G
Sbjct: 136 HGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDA 195
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
+ A LF +MP + SWT+MI GY G EA+D+F +M+ G+ P+E+++V+VL AC
Sbjct: 196 EGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVAC 255
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A +G+L LG IH + +++ + +CN LI+MY+KCGC+ A ++FD M ER VVSWS
Sbjct: 256 ADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWS 315
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I GLA HG+A A+ LF++M V PN +TFIG+L AC+H G +G YF SM RD
Sbjct: 316 AMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRD 375
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
+ I +IEHYGC+VDL RAG L +A I MP+ P+ +WG+LL C+ + N+++A
Sbjct: 376 YGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEE 435
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A HL L+P + G YV+LSNIYA+ GRWEDV+R+RKL+R + +KKTPG S I V V
Sbjct: 436 ATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVY 495
Query: 500 EFVSGDDTKPFLKDIFWLLELL 521
FV+GDDT P ++IF E L
Sbjct: 496 NFVAGDDTHPQTEEIFQTWEKL 517
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/474 (43%), Positives = 307/474 (64%), Gaps = 7/474 (1%)
Query: 47 FLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML 104
F ++I C ++ GD+++A LLF + F++N M+RA+T+ ++LYK ML
Sbjct: 21 FAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYML 80
Query: 105 RDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK 164
TG LP+ +T F++++CA L S G +HA + G +++ +N LL LY
Sbjct: 81 S---TG--FLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYAS 135
Query: 165 CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGY 224
C+ + A ++F+ +RD+V W +I+GYA+ GQ+ AR LFD+MP VSW+AMI+GY
Sbjct: 136 CNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGY 195
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT 284
IG + EAL++F MQ+ G P+ +IV L ACA LG+L+ G WIH Y D+N ++
Sbjct: 196 AQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDR 255
Query: 285 VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
++ ALI+MY KCGC+ A ++FD+M++RDV +++++I GLANHG + AI +F MQ
Sbjct: 256 ILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNE 315
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
V PN++TFI LLSAC+ G EGL F SM + IE ++HYGCLVDLLGRAG L+
Sbjct: 316 GVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLED 375
Query: 405 ALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAK 464
A ++ EMP++PD+ + G+LL++CR + ++E+ +E L + G +VLLSN+YA
Sbjct: 376 AKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYAS 435
Query: 465 HGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+WEDV+++RK + K +KK PGCSLIEV+ V EFV+GD + F+ +I LL
Sbjct: 436 ANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMSHVFMDEIVLLL 489
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
Query: 18 VPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V L +C L L + IH + + + L T +ID+ G + A +F ++ +
Sbjct: 224 VGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLD 283
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+VF + ++I N+ AI ++ +M + + P++ T ++ +C+ +
Sbjct: 284 RDVFAFTSLISGLANHGHSATAIEMFTRMQNEG-----VCPNEVTFICLLSACSRVGLVE 338
Query: 135 LGKQIHAHVCK-FGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
G +I + +G++ L+DL G+ L +A +V EM
Sbjct: 339 EGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM 383
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/506 (41%), Positives = 324/506 (64%), Gaps = 7/506 (1%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV--KEP 75
+ +L++ + EL+++H QI+K S +T++ VC YA +FK V ++P
Sbjct: 32 IDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKP 91
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
F++N+ ++A AI L+ ++ + + PD FT V+++C LL S
Sbjct: 92 ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYD-----VCPDTFTCSSVLRACLNLLDLSN 146
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+ +H V K G +S+ +N ++ LY C E+ EA +FE+M RD+V WN +I+ +
Sbjct: 147 GRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIK 206
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + A LF +MP + SWT+MI+GY G EA+ +F +M+ G++ +E+++V+V
Sbjct: 207 QGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAV 266
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L ACA LG+L+LG IH Y +++ R I N LI+MY+KCGC+ +A ++F++M ER V
Sbjct: 267 LAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTV 326
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSWS +IGGLA HG+A +A+ LF +M ++ + PN +TFIGLL AC+H G +EG +F S
Sbjct: 327 VSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFAS 386
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M RD+ I +IEHYGC+VDLL RAG L +A I MPMKP+ +WG+LL +CR + N+E
Sbjct: 387 MTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVE 446
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A A++HLL L+P + G YV+LSNIYA+ GRWED +R+RK ++ + +KKTPG S I V+
Sbjct: 447 MAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVD 506
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELL 521
V EFV+G+++ P + IF E L
Sbjct: 507 GVVHEFVAGEESHPDTEQIFQRWEEL 532
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/513 (39%), Positives = 320/513 (62%), Gaps = 7/513 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+++H I+K S + F+ +I + + G+++ A +F + + +V +N MI Y +
Sbjct: 139 RELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRS 198
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ ++ L+ +M R +LP TL V+ +C+ L ++GK++H +V ++
Sbjct: 199 KQFDESMKLFDEMER-----MRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEP 253
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+ ENAL+D+Y C ++ A +F+ M RD+++W +++G+ LGQ+ AR FDKMP
Sbjct: 254 VRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMP 313
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
VSWTAMI GY + + E L +FR+MQ I+PDE ++VS+L ACA LG+LELGEW
Sbjct: 314 ERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEW 373
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
I Y DKN + + + NALI+MY CG + +A ++F+ M RD +SW+ VI GLA +G
Sbjct: 374 IKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGY 433
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+A+ +F +M + + P+++T IG+L AC H+G ++G +F M H IE + HYG
Sbjct: 434 GEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYG 493
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C+VDLLGRAG L +A +I+ MP+KP++ +WGSLL +CR + + E+A +A + +L LEPE
Sbjct: 494 CMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPE 553
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
+ YVLL NIYA RWE + +RKL+ + +KKTPGCSLIE+N V EFV+GD P
Sbjct: 554 NGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQ 613
Query: 511 LKDIFWLLELLALHQDRAKDVIDI--MYEDIGE 541
K+I+ L+ +++ A D ++ DIGE
Sbjct: 614 SKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGE 646
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 215/441 (48%), Gaps = 75/441 (17%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
++++C+++ +LK+IH+Q + L + + ++I C + GD+ YA ++F + PN
Sbjct: 25 LIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNH 84
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F++N MI+ Y+ A+++Y +ML ++PD++T PF++K G+
Sbjct: 85 FVWNNMIKGYSRVGCPNSAVSMYCEMLERG-----VMPDEYTYPFLLKRFTRDTAVKCGR 139
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
++H H+ K G S+ +NAL+ LY E+ A VF+ + D+V WN +ISGY R
Sbjct: 140 ELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSK 199
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
Q FD E++ +F +M+ + + P I++VSVL
Sbjct: 200 Q-------FD------------------------ESMKLFDEMERMRVLPSSITLVSVLS 228
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
AC++L L +G+ +H Y + V+ NALI+MY CG ++ A +FD M RDV+S
Sbjct: 229 ACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVIS 288
Query: 318 WSTVIGGLANHGKA-------------------------------HKAIHLFHEMQRLKV 346
W+ ++ G N G+ + + LF EMQ +
Sbjct: 289 WTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANI 348
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY--GCLVDLLGRAGRLDQ 404
P++ T + +L+ACAH G G + ++ E KI+ + L+D+ G +++
Sbjct: 349 KPDEFTMVSILTACAHLGALELGEWIKAYIDKN---EIKIDSFVGNALIDMYFNCGNVEK 405
Query: 405 ALNIIEEMPMKPDAKIWGSLL 425
A+ I MP + D W +++
Sbjct: 406 AIRIFNAMPHR-DKISWTAVI 425
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 5/289 (1%)
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
LG M+ ARM+FD MP W MI GY+ +G A+ ++ +M G+ PDE + +
Sbjct: 66 LGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFL 125
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L + +++ G +H + K + NALI +Y G ++ A +FD+ + DV
Sbjct: 126 LKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDV 185
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
V+W+ +I G + +++ LF EM+R++V P+ IT + +LSAC+ N G
Sbjct: 186 VTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRY 245
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
+K D IE L+D+ G +D AL I + M + D W ++++ ++NL
Sbjct: 246 VK-DLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSR-DVISWTAIVTG---FTNLG 300
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+A + + D ++ + + Y + R+++V + + +++ ++K
Sbjct: 301 QVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/500 (39%), Positives = 320/500 (64%), Gaps = 14/500 (2%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---------LAYASLL 68
+ +LQSC + +LK IH +L+ L F+ ++++ + D L YA +
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGI 75
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F Q++ PN+F++N +IR ++ A Y QML+ S I PD T PF+IK+
Sbjct: 76 FSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLK-----SRIWPDNITFPFLIKAST 130
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
+ C +G+Q H+ + +FG ++ EN+L+ +Y C + A ++F +M RD+V+W +
Sbjct: 131 EMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTS 190
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+++GY + G ++ AR +FD+MP+ + +W+ MI+GY + +A+D+F M+ G+ +
Sbjct: 191 MVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVAN 250
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
E +VSV+ +CA LG+LE GE H Y K+H+ ++ AL++MY +CG I +A ++F+
Sbjct: 251 ETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFE 310
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
++ ++D +SWS++I GLA HG AHKAIH F +M RL P DIT +LSAC+H G ++
Sbjct: 311 ELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDK 370
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
GL +++MKRD+ IE ++EHYGC+VD+LGRAG+L +A N I +MP+KP+A I G+LL +C
Sbjct: 371 GLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGAC 430
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
+ Y N E+A L+ ++PE +G YVLLSNIYA G+WE + +R +++ K +KK PG
Sbjct: 431 KIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPG 490
Query: 489 CSLIEVNNEVQEFVSGDDTK 508
SLIE++ ++ +F GDD K
Sbjct: 491 WSLIEIDGKINKFSMGDDQK 510
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/549 (37%), Positives = 327/549 (59%), Gaps = 48/549 (8%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLV--TKMIDVCNSGG--DLAYASLLFKQV 72
F+ LQ+C+++ LK+IH I+K + S L T++ +C D YA L Q+
Sbjct: 40 FLSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQL 99
Query: 73 KEPNVFLYNAMIRAYT---NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ PN+ LYNA+IR N+ + GL + YKQML I+PD +T+PFV+K+CA
Sbjct: 100 RTPNLPLYNAIIRGLATSNNDSIEGLVV--YKQMLSKG-----IVPDNYTIPFVLKACAE 152
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
G+++H K GL S N L+ +Y CD + A KVF+ RD+V+W +
Sbjct: 153 SRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTM 212
Query: 190 ISGYARLGQMKK----------------------------------ARMLFDKMPYTTIV 215
I GY ++G ++ AR +F +MP +V
Sbjct: 213 IQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVV 272
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
SW +MISG G + E+L +FR+MQ +G++PD++++V+VL +CA LG LELG+W+H Y
Sbjct: 273 SWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYL 332
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
D+N + I NAL++MY KCG I+QA +F M +DV S++ +I GLA HG+ KA+
Sbjct: 333 DRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKAL 392
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
LF EM ++ + P+++TF+G+L+AC+H G EG YF+ M +++ ++EHYGC+VDL
Sbjct: 393 DLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDL 452
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGRAG +++A I MP++PDA + G+LL +C+ + +E+ M+ + +EP G Y
Sbjct: 453 LGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAY 512
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
VL+SNIY+ RW D ++RK ++ ++++KTPGCS IE++ + EF GD + P +K+I+
Sbjct: 513 VLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIY 572
Query: 516 WLLELLALH 524
LL+ + H
Sbjct: 573 KLLDEIMSH 581
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/506 (41%), Positives = 324/506 (64%), Gaps = 7/506 (1%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV--KEP 75
+ +L++ + EL+++H QI+K S +T++ VC YA +F+ V ++P
Sbjct: 32 IDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQKP 91
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
F++N+ ++A AI L+ ++ + + PD FT V+++C LL S
Sbjct: 92 ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYD-----VCPDTFTCSSVLRACLNLLDLSN 146
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+ +H V K G +S+ +N ++ LY C E+ EA +FE+M RD+V WN +I+ +
Sbjct: 147 GRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIK 206
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + A LF +MP + SWT+MI+GY G EA+ +F +M+ G++ +E+++V+V
Sbjct: 207 QGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAV 266
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L ACA LG+L+LG IH Y +++ R I N LI+MY+KCGC+ +A ++F++M ER V
Sbjct: 267 LAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTV 326
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSWS +IGGLA HG+A +A+ LF +M ++ + PN +TFIGLL AC+H G +EG +F S
Sbjct: 327 VSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFAS 386
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M RD+ I +IEHYGC+VDLL RAG L +A I MPMKP+ +WG+LL +CR + N+E
Sbjct: 387 MTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVE 446
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A A++HLL L+P + G YV+LSNIYA+ GRWED +R+RK ++ + +KKTPG S I V+
Sbjct: 447 MAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVD 506
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELL 521
V EFV+G+++ P + IF E L
Sbjct: 507 GVVHEFVAGEESHPDTEQIFQRWEEL 532
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/498 (39%), Positives = 311/498 (62%), Gaps = 9/498 (1%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLA-YASLLFKQVKEPN 76
L++C +L LK IH +++ + F +++I C +SG L YAS +F Q++ PN
Sbjct: 24 LETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPN 83
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+F++NAMIR ++ + A + Y Q R +LPD T PF++KSC L C S+G
Sbjct: 84 LFIFNAMIRGHSGSKNPDQAFHFYVQSQRQG-----LLPDNLTFPFLVKSCTKLHCISMG 138
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
Q H H+ K G + +N+L+ +Y + A +F+ M D+V+W ++I G+ +
Sbjct: 139 SQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKC 198
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G ++ AR LFD+MP +V+W+ MISGY + +A+++F+ +Q G+ +E +VSV+
Sbjct: 199 GDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVI 258
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
+CA LG+LELGE H Y KN + ++ AL++MY +CG I++A +F+ + ERD +
Sbjct: 259 SSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTL 318
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+ +I GLA HG + +++ F M + P DITF +LSAC+H G G F+SM
Sbjct: 319 SWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESM 378
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
KRDH +E ++EHYGC+VDLLGRAG+L++A + +MP+KP+A +WG+LL +CR + N EI
Sbjct: 379 KRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEI 438
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ L+ L P+ +G YVLLSNIYA WE V+ MR+++++K +KK PG SLIE++
Sbjct: 439 GERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDG 498
Query: 497 EVQEFVSGDDTKPFLKDI 514
V +F GD + P + I
Sbjct: 499 RVHKFTIGDSSHPEMDKI 516
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/520 (38%), Positives = 334/520 (64%), Gaps = 15/520 (2%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG-GDLAYASLLFKQ 71
L + + +L+ C +L LK++ ++ +Q++F K++ C +L+YA +F
Sbjct: 54 LNNSVLALLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLALSNLSYARFIFDH 113
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
V+ PNV+LY AMI AY ++ + A+ LY+ M+R R P+ F P V+KSC ++
Sbjct: 114 VESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRP----WPNHFIYPHVLKSCTQVV 169
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV-FEEMTDRDIVAWNNLI 190
P + +H V + G + + + + ALLD Y + +E+ ++ F+EMT+R++V+W +I
Sbjct: 170 GPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMI 229
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV------- 243
SGY RLGQ+ A +LF++MP + SW A+I+GYT G + EAL +FR+M V
Sbjct: 230 SGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQ 289
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G P++++ V L AC G L LG+WIH Y +N L + + NAL++MY KCGC+ +A
Sbjct: 290 GNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEA 349
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK--VPPNDITFIGLLSACA 361
++FD+ +ER + SW+++I LA HG++ AI +F EM V P+++TFIGLL+AC
Sbjct: 350 RRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACT 409
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G +G +YF+ M +++ IE +IEHYGCLVDLLGRAG+ ++A+ ++ M ++PD IW
Sbjct: 410 HGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIW 469
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
GSLL+ C+ + + ++A +++ L+ ++P + G ++L+NIY + G+W++V ++RK+++ +
Sbjct: 470 GSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQ 529
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+ KTPGCS IE++N+V +F S D T P ++I+ LE L
Sbjct: 530 NAHKTPGCSWIEIDNQVHQFYSVDKTHPRTEEIYNTLESL 569
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/502 (40%), Positives = 315/502 (62%), Gaps = 7/502 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS--GGDLAYASLLFKQVKEPNV 77
+LQ C N+ EL++IH Q+LK L +K++ C S G LAYA +F ++ PN
Sbjct: 24 LLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNT 83
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F++N MIR Y+N+ A+ LY ML + + +T PF++K+C+ + +
Sbjct: 84 FMWNTMIRGYSNSKEPEEALLLYHHMLYHS-----VPHNAYTFPFLLKACSSMSASEETQ 138
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIHAH+ K G S T N+LL++Y K ++ A +F+++ RD V+WN++I GY + G
Sbjct: 139 QIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCG 198
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+++ A +F+ MP I+SWT+MISG G EAL++F +MQ GI+ D +++VS L
Sbjct: 199 EIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQ 258
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACA LG L+ G+WIH Y K+ + ++ LI+MY KCG + +A ++F +M E+ V
Sbjct: 259 ACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSV 318
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G A HG+ +A+ F +MQ V PN +TF G+L+AC+H G +E + F+SM+
Sbjct: 319 WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESME 378
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
R H + IEHYGC+VDLLGRAG L +A +IE MP+KP+A IWG+LL++C + NLE+
Sbjct: 379 RIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELG 438
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
+ L+ ++P G Y+ L++I+A G W +R+R+ ++ + + K PGCS+I VN
Sbjct: 439 KQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGT 498
Query: 498 VQEFVSGDDTKPFLKDIFWLLE 519
EF++GD++ P +K+I +LE
Sbjct: 499 AHEFLAGDESHPQIKEIDHMLE 520
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/534 (40%), Positives = 317/534 (59%), Gaps = 14/534 (2%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ P+ Q L LK ++H +L L + + +KM+ S GD+ + +F +
Sbjct: 73 YAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIG 132
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
EP+ L+N+MIRAY + Y M TG D FT PFV+KS LL
Sbjct: 133 EPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTG-----DYFTFPFVLKSSVELLSV 187
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+GK +H + + GL+ +L+ LYGKC E+ +A KVF+ MT RD+ +WN L++GY
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 247
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM--QMVGIEPDEIS 251
+ G + A +F++MP+ IVSWT MISGY+ G +AL +F +M + G+ P+ ++
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
I+SVLPACAQL +LE G IH + L + AL MY KCG + A FD++
Sbjct: 308 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 367
Query: 312 --ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
E+++++W+T+I A++G +A+ F EM + + P+DITF GLLS C+H+G + G
Sbjct: 368 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 427
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
L YF+ M + I ++EHY C+ DLLGRAGRL +A ++ EMPM IWGSLL++CR
Sbjct: 428 LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACR 487
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ NLE+A A L VLEPE+TGNYVLLSN+YA+ GRW++V ++R +++S+ KK+PGC
Sbjct: 488 KHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGC 547
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY--EDIGE 541
S IE+N + F+ GD + P K+I+ LE L A D Y DI E
Sbjct: 548 SWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISE 601
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/485 (43%), Positives = 309/485 (63%), Gaps = 7/485 (1%)
Query: 29 ELKKIHTQILKYLLSQ--SNFLVTKMIDVCNSGGDLAYASLLFKQ-VKEPNVFLYNAMIR 85
+L +I QI+ + N + K I V +S G+L ++ L+F + PN+F YNA+++
Sbjct: 39 QLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLK 98
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
A++ ++ + I+ + L P + PD++T V+K+CAGL G+++H V K
Sbjct: 99 AFSQHNAWHTTISYFNNQLVLPNAPN---PDEYTFTSVLKACAGLAQVLEGQKVHCFVTK 155
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
+G +S+ N+L+DLY K A K+F+EM RD+V+WN LISGY G + KARM+
Sbjct: 156 YGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMV 215
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGS 264
FD M +VSW+ MISGY YA+A+++FRQMQ G + P+++++VSVL ACA LG+
Sbjct: 216 FDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGA 275
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
L+LG+WIH + +N + + NAL +MY KCGC+ +A +F +M ERDV+SWS +I G
Sbjct: 276 LDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMG 335
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA +G A++A + F EM + PNDI+F+GLL+AC H G ++GL YFD M + + I
Sbjct: 336 LAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITP 395
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
KIEHYGC+VDLL RAGRLDQA ++I MPM+P+ +WG+LL CR Y + E + +
Sbjct: 396 KIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRI 455
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
L L+ +G+ V L+N+YA GR +D + R +R KTPGCS IE+NN V EF G
Sbjct: 456 LELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMG 515
Query: 505 DDTKP 509
D + P
Sbjct: 516 DSSHP 520
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/516 (39%), Positives = 325/516 (62%), Gaps = 21/516 (4%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSGGDLAYASLLFKQVKEPNVFLYN 81
C+ + +LK++H Q++K + +++ + DL YA +F+ + PN F YN
Sbjct: 21 CKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYN 80
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
+IRA + ++ A+ ++ +M+ D + P+ FT P V K+C G+Q+H
Sbjct: 81 TLIRALSESNDPCDALLVFIEMVED----CSVEPNCFTFPSVFKACGRAERLREGRQVHG 136
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVF---------------EEMTDRDIVAW 186
KFGL S + ++ +Y C + +AH++F + D D+V W
Sbjct: 137 LAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLW 196
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
N +I GY R+G+++ AR LFD+MP ++VSW MI+GY G + EA++VFR+MQM +
Sbjct: 197 NVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVP 256
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
P+ +++VSVLPA ++LG+LELG+W+H+Y +N++ V+ +ALI+MY KCG I +A Q+
Sbjct: 257 PNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQV 316
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F+ + +R+VV+WST+I GLA HG+A + F +M+R V P+D+T+IGLLSAC+H G
Sbjct: 317 FEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLV 376
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
NEG +FD M R +E +IEHYGC+VDLLGRAG L+++ +I MP+KPD IW +LL
Sbjct: 377 NEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLG 436
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+C+ + N+E+ EHL+ L P D+G+YV LSNIYA G WE V+++R +++ ++K
Sbjct: 437 ACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKD 496
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
PGCS IE++ + EF+ DD+ P K I +L+ ++
Sbjct: 497 PGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMS 532
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/502 (40%), Positives = 315/502 (62%), Gaps = 7/502 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS--GGDLAYASLLFKQVKEPNV 77
+LQ C N+ EL++IH Q+LK L +K++ C S G LAYA +F ++ PN
Sbjct: 24 LLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNT 83
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F++N MIR Y+N+ A+ LY ML + + +T PF++K+C+ + +
Sbjct: 84 FMWNTMIRGYSNSKEPEEALLLYHHMLYHS-----VPHNAYTFPFLLKACSSMSALEETQ 138
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIHAH+ K G S T N+LL++Y K ++ A +F+++ RD V+WN++I GY + G
Sbjct: 139 QIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCG 198
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+++ A +F+ MP I+SWT+MISG G EAL++F +MQ GI+ D +++VS L
Sbjct: 199 EIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQ 258
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACA LG L+ G+WIH Y K+ + ++ LI+MY KCG + +A ++F +M E+ V
Sbjct: 259 ACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSV 318
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G A HG+ +A+ F +MQ V PN +TF G+L+AC+H G +E + F+SM+
Sbjct: 319 WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESME 378
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
R H + IEHYGC+VDLLGRAG L +A +IE MP+KP+A IWG+LL++C + NLE+
Sbjct: 379 RIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELG 438
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
+ L+ ++P G Y+ L++I+A G W +R+R+ ++ + + K PGCS+I VN
Sbjct: 439 KQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGT 498
Query: 498 VQEFVSGDDTKPFLKDIFWLLE 519
EF++GD++ P +K+I +LE
Sbjct: 499 AHEFLAGDESHPQIKEIDHMLE 520
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/501 (40%), Positives = 311/501 (62%), Gaps = 7/501 (1%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVF 78
L SC + ELK+ H+QI++ LS N + ++I C + GDL YA +F ++ P+ +
Sbjct: 27 LDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAY 86
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+YN + R Y L I +Y +ML + P+KFT P +I++C GKQ
Sbjct: 87 IYNTIFRGYLRWQLARNCIFMYSRMLHKS-----VSPNKFTYPPLIRACCIDYAIEEGKQ 141
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
IHAHV KFG + + N L+ +Y L +A +VF+ M RD+V+W +LI+GY++ G
Sbjct: 142 IHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGF 201
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ KAR +F+ MP VSW AMI+ Y EA +F +M++ + D+ S+L A
Sbjct: 202 VDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSA 261
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
C LG+LE G+WIH Y +K+ + + + +I+MY KCGC+ +AS++F+++ ++ + SW
Sbjct: 262 CTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSW 321
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ +IGGLA HGK AI LF EM+R V P+ ITF+ +LSACAH+G EG YF M
Sbjct: 322 NCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTE 381
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
++ +EH+GC+VDLLGRAG L++A +I EMP+ PDA + G+L+ +CR + N E+
Sbjct: 382 VLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGE 441
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
+ ++ LEP ++G YVLL+N+YA GRWEDV+++RKL+ + +KK PG S+IE + V
Sbjct: 442 QIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGV 501
Query: 499 QEFVSGDDTKPFLKDIFWLLE 519
EF++G P K+I+ L+
Sbjct: 502 DEFIAGGRAHPQAKEIYAKLD 522
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/484 (41%), Positives = 302/484 (62%), Gaps = 5/484 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+++H +LK+ L + F+ T ++ + G L A +F + +V +N +I AY
Sbjct: 138 RQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 197
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ + L+ M +LP TL V+ +C+ L GK++H++V ++S
Sbjct: 198 GKFEESRRLFLVM-----EDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVES 252
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+ + ENA++D+Y C E+ A +F M +RDI++W ++SG+ LG++ AR FDKMP
Sbjct: 253 NLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMP 312
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
VSWTAMI GY + EAL++FR MQ ++PDE ++VSVL ACA LG+LELGEW
Sbjct: 313 EKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEW 372
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
I Y D+N + + NALI+MY KCG +++A +F +M +RD +W+ +I GLA +G
Sbjct: 373 IRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGH 432
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
KA+ +F M + + P++IT+IG+LSAC HTG ++G YF M H IE I HYG
Sbjct: 433 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 492
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
CLVDLL RAGRL +A +IE MP+K ++ +WG+LL+ CR Y ++A + ++ +L LEP+
Sbjct: 493 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD 552
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
+ YVLL NIYA RW D+ +R+++ K +KKTPGCSLIE+N V EFV+GD + P
Sbjct: 553 NGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQ 612
Query: 511 LKDI 514
K+I
Sbjct: 613 TKNI 616
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 213/445 (47%), Gaps = 77/445 (17%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKE 74
+ +L++CE++ +L+++H Q +K L+ + L +++ C + GD YA LF ++ E
Sbjct: 21 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
PN+F++N MIR Y+ L ++LY +MLR + PD++T PF+ K +
Sbjct: 81 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRG-----VKPDRYTFPFLFKGFTRDIALE 135
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+Q+H HV K GL+ + AL+ +Y C +L A VF+ D++ WN +IS Y
Sbjct: 136 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYN 195
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
++G+ +++R LF M ++ P +++V
Sbjct: 196 KVGKFEESRRLFLVMEDKQVL-------------------------------PTTVTLVL 224
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
VL AC++L L G+ +H Y + V+ NA+I+MY CG ++ A +F M RD
Sbjct: 225 VLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRD 284
Query: 315 VVSWSTVIGGLANHG-------------------------------KAHKAIHLFHEMQR 343
++SW+T++ G N G + +A+ LF MQ
Sbjct: 285 IISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 344
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEG---LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
V P++ T + +L+ACAH G G Y D K I++ + L+D+ + G
Sbjct: 345 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNK----IKNDLFVRNALIDMYFKCG 400
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLL 425
+D+A +I EM + D W +++
Sbjct: 401 DVDKAESIFREMSQR-DKFTWTAMI 424
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 163/344 (47%), Gaps = 11/344 (3%)
Query: 147 GLKSHSITENALLDLYGKC---DELIEAH-KVFEEMTDRDIVAWNNLISGYA--RLGQMK 200
LKS S + L+ L C D+L + H + ++ + + V N +++ G +
Sbjct: 10 ALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 69
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
AR LFD++P + W MI GY+ + + ++ +M G++PD + +
Sbjct: 70 YARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT 129
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
+ +LE G +H + K+ L + AL++MY+ CG ++ A +FD + DV++W+
Sbjct: 130 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 189
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
+I GK ++ LF M+ +V P +T + +LSAC+ G S ++
Sbjct: 190 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG-KKVHSYVKNC 248
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
+E + ++D+ G +D AL I M + D W +++S ++NL +A
Sbjct: 249 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSG---FTNLGEIDVA 304
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+ + +D ++ + + Y + R+++ + + +++ ++K
Sbjct: 305 RNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 348
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/530 (40%), Positives = 325/530 (61%), Gaps = 11/530 (2%)
Query: 1 MAARIGALSIKELEDRFVPILQ-SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG 59
M RI ALS+ + FV L+ NL LK+ H ++ L++ N V K I+ C++
Sbjct: 1 MIQRINALSLSSGLNWFVTSLKIHGTNLKTLKQSHCFMIITGLNRDNLNVAKFIEACSNA 60
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYT---NNHLYGLAINLYKQMLRDPRTGSLILPD 116
G L YA +F PN +L+N MIRA + + + +AI +Y++ PD
Sbjct: 61 GHLRYAYSVFTHQPFPNTYLHNTMIRALSLVDERNAHSIAITVYRKFW-----AFCAKPD 115
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
FT PFV+K + G+Q+H FG S L+ +Y C L +A KVF+
Sbjct: 116 TFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFD 175
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP--YTTIVSWTAMISGYTHIGSYAEAL 234
EM RD+ WN L++GY ++G+M +AR L + MP VSWT +ISGY G +EA+
Sbjct: 176 EMRVRDVNVWNALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAI 235
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+VF++M M ++PDE+++++VL ACA LGSLELGE I Y D + R + NA+I+MY
Sbjct: 236 EVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMY 295
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
K G I +A ++F+ + ER+VV+W+T+I GLA HG +A+ +F M + V PND+TFI
Sbjct: 296 AKSGNITKALEVFESVNERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFI 355
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM 414
+LSAC+H G+ + G +F+SM+ + I IEHYGC++DLLGRAG+L +A +I+ MP
Sbjct: 356 AILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPF 415
Query: 415 KPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRM 474
+ +A IWGSLL++ + ++++ A+ L+ LEP ++GNY+LL+N+Y+ GRW++ M
Sbjct: 416 ESNAAIWGSLLAASNVHHDIDVGERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMM 475
Query: 475 RKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
RK+++ +KK G S IEV N V +F+SGD + P ++ I LL+ + L
Sbjct: 476 RKMMKGIGVKKLAGESSIEVENRVYKFISGDLSHPQVEKIHELLQEMDLQ 525
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/484 (41%), Positives = 301/484 (62%), Gaps = 5/484 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+++H +LK+ L + F+ T ++ + G L A +F + +V +N +I AY
Sbjct: 159 RQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 218
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ + L+ M +LP TL V+ +C+ L GK++H++V ++S
Sbjct: 219 GKFEESRRLFLVM-----EDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVES 273
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+ + ENA++D+Y C E+ A +F M +RDI++W ++SG+ LG++ AR FDKMP
Sbjct: 274 NLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMP 333
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
VSWTAMI GY + EAL++FR MQ ++PDE ++VSVL ACA LG+LELGEW
Sbjct: 334 EKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEW 393
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
I Y D+N + + NALI+MY KCG +++A +F +M +RD +W+ +I GLA +G
Sbjct: 394 IRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGH 453
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
KA+ +F M + + P++IT+IG+LSAC HTG ++G YF M H IE I HYG
Sbjct: 454 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 513
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
CLVDLL RAGRL +A +IE MP+K ++ +WG+LL+ CR Y ++A + ++ +L LEP+
Sbjct: 514 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD 573
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
+ YVLL NIYA RW D+ +R+++ K +KK PGCSLIE+N V EFV+GD + P
Sbjct: 574 NGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQ 633
Query: 511 LKDI 514
K+I
Sbjct: 634 TKNI 637
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 213/445 (47%), Gaps = 77/445 (17%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKE 74
+ +L++CE++ +L+++H Q +K L+ + L +++ C + GD YA LF ++ E
Sbjct: 42 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 101
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
PN+F++N MIR Y+ L ++LY +MLR + PD++T PF+ K +
Sbjct: 102 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRG-----VKPDRYTFPFLFKGFTRDIALE 156
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+Q+H HV K GL+ + AL+ +Y C +L A VF+ D++ WN +IS Y
Sbjct: 157 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYN 216
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
++G+ +++R LF M ++ P +++V
Sbjct: 217 KVGKFEESRRLFLVMEDKQVL-------------------------------PTTVTLVL 245
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
VL AC++L L G+ +H Y + V+ NA+I+MY CG ++ A +F M RD
Sbjct: 246 VLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRD 305
Query: 315 VVSWSTVIGGLANHG-------------------------------KAHKAIHLFHEMQR 343
++SW+T++ G N G + +A+ LF MQ
Sbjct: 306 IISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 365
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEG---LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
V P++ T + +L+ACAH G G Y D K I++ + L+D+ + G
Sbjct: 366 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNK----IKNDLFVRNALIDMYFKCG 421
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLL 425
+D+A +I EM + D W +++
Sbjct: 422 DVDKAESIFREMSQR-DKFTWTAMI 445
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 163/344 (47%), Gaps = 11/344 (3%)
Query: 147 GLKSHSITENALLDLYGKC---DELIEAH-KVFEEMTDRDIVAWNNLISGYA--RLGQMK 200
LKS S + L+ L C D+L + H + ++ + + V N +++ G +
Sbjct: 31 ALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 90
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
AR LFD++P + W MI GY+ + + ++ +M G++PD + +
Sbjct: 91 YARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT 150
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
+ +LE G +H + K+ L + AL++MY+ CG ++ A +FD + DV++W+
Sbjct: 151 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 210
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
+I GK ++ LF M+ +V P +T + +LSAC+ G S ++
Sbjct: 211 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG-KKVHSYVKNC 269
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
+E + ++D+ G +D AL I M + D W +++S ++NL +A
Sbjct: 270 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSG---FTNLGEIDVA 325
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+ + +D ++ + + Y + R+++ + + +++ ++K
Sbjct: 326 RNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 369
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 306/494 (61%), Gaps = 12/494 (2%)
Query: 19 PILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---LAYASLLFKQV 72
PIL E ++ EL + H ILK L S F +++I ++ + YA +F ++
Sbjct: 9 PILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRI 68
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
PN +++N +IRAY N+ A+ ++ QML + +LPDK+T F +KSC
Sbjct: 69 PNPNSYMWNTIIRAYANSPTPEAALTIFHQMLH-----ASVLPDKYTFTFALKSCGSFSG 123
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
G+QIH HV K GL +N L+ LY C + +A + + M +RD+V+WN L+S
Sbjct: 124 VEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSA 183
Query: 193 YARLGQMKKA-RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
YA G M+ A R +F + P +VSW AMI+GY+H G ++E L +F MQ G++PD +
Sbjct: 184 YAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCT 243
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VSVL ACA +G+L GEW+H Y DKN + + AL++MY KCG I +A ++F+ +
Sbjct: 244 LVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCL 303
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+D+ +W+++I GL+ HG A+ +F EM PN++TF+ +LSAC+ G +EG
Sbjct: 304 RKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGRE 363
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
F+ M H I+ IEHYGC+VDLLGR G L++A ++++MP K + +W SLL +CR +
Sbjct: 364 MFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNH 423
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+E+A + LL L P+++ ++V LSN+YA GRW+DV +R+ +R++ ++K PGCS+
Sbjct: 424 GNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSM 483
Query: 492 IEVNNEVQEFVSGD 505
IEV+ V EF++G+
Sbjct: 484 IEVDGTVYEFLAGE 497
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/534 (40%), Positives = 329/534 (61%), Gaps = 11/534 (2%)
Query: 17 FVPILQ--SCENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ PI Q + N I+L ++ H QI+ + L + FL KM+ + S GDL A ++F ++
Sbjct: 80 YAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRID 139
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
P+ LYN++IRAYT + + R G +L D FTLPFV+KSCA L
Sbjct: 140 NPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLG--LLGDNFTLPFVLKSCADLSRV 197
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+G+ +H + GL+ +L+D+Y KC + +A K+F++M RD+ +WN LI+GY
Sbjct: 198 CMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGY 257
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE--PDEIS 251
+ G++ A LF++M + IVSWTAMISGYT G +AL +F +M G E P+ ++
Sbjct: 258 MKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVT 317
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
IVSVLPACAQ +LE G IH + + L + + AL MY KC + +A FD +
Sbjct: 318 IVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIA 377
Query: 312 E--RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
+ +++++W+T+I A+HG +A+ +F M R V P+ +TF+GLLS C+H+G + G
Sbjct: 378 QNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG 437
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
L +F+ M H +E ++EHY C+VDLLGRAGRL +A +I +MPM+ +WG+LL++CR
Sbjct: 438 LNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACR 497
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
++ NLEIA +A L VLEP+++GNYVLLSN+YA+ G WE+V ++R L++ + MKK+PGC
Sbjct: 498 SHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGC 557
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY--EDIGE 541
S IE+N + F+ D + P K+I+ LE L A + D + DI E
Sbjct: 558 SWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISE 611
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 310/491 (63%), Gaps = 18/491 (3%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
+LK+IH L+ L + FL+ K++ + DL YA LF Q+ +P+V+LYN I+ ++
Sbjct: 3 QLKQIHAYSLRNGLDHTKFLIEKLLQL----PDLPYACTLFDQIPKPSVYLYNKFIQTFS 58
Query: 89 N-NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG 147
+ H + + LY QM + P++++ F+ +CA L G+ +H+H CK G
Sbjct: 59 SIGHPHRCWL-LYCQMCSQGCS-----PNQYSFTFLFPACASLFNVYPGQMLHSHFCKSG 112
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
S ALLD+Y K L A ++F+EM RDI WN+LI+GYAR G M+ A LF+
Sbjct: 113 FASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFN 172
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEISIVSVLPACAQLGSLE 266
KMP ++SWTA+ISGY G YA+AL++F ++ G +P+E+SI SVLPAC+QLG+L+
Sbjct: 173 KMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALD 232
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGL 325
+G+ I Y N + + NA++E++ +CG I +A Q+FD++ +R++ SW+T+I GL
Sbjct: 233 IGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGL 292
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A HG+ A+ L+ +M K+ P+D+TF+GLL AC H G EG F+SM+ + K
Sbjct: 293 AVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPK 352
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+EHYGCLVDLLGRAG L +A N+I+ MPM PD+ IWG+LL +C + N+E+ +A E L
Sbjct: 353 LEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLF 412
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
LEP + GNYV+LSNIYA G W V+R+RK+++ + K G S IEV + + EF+ D
Sbjct: 413 KLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVED 472
Query: 506 D-----TKPFL 511
+PFL
Sbjct: 473 RITSRCVQPFL 483
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 316/498 (63%), Gaps = 12/498 (2%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD-------LAYASLLFK 70
+ +LQSC + +LK IH +L+ L F+ ++++ +C L YA +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
Q++ PN+F++N +IR ++ A Y QML+ S I PD T PF+IK+ + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK-----SRIWPDNITFPFLIKASSEM 130
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
C +G+Q H+ + +FG ++ EN+L+ +Y C + A ++F +M RD+V+W +++
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+GY + G ++ AR +FD+MP+ + +W+ MI+GY + +A+D+F M+ G+ +E
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+VSV+ +CA LG+LE GE + Y K+H+ ++ AL++M+ +CG I +A +F+ +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
E D +SWS++I GLA HG AHKA+H F +M L P D+TF +LSAC+H G +GL
Sbjct: 311 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+++MK+DH IE ++EHYGC+VD+LGRAG+L +A N I +M +KP+A I G+LL +C+
Sbjct: 371 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKI 430
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
Y N E+A L+ ++PE +G YVLLSNIYA G+W+ + +R +++ K +KK PG S
Sbjct: 431 YKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
Query: 491 LIEVNNEVQEFVSGDDTK 508
LIE++ ++ +F GDD K
Sbjct: 491 LIEIDGKINKFTMGDDQK 508
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 313/503 (62%), Gaps = 5/503 (0%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
EL++ + L+SC L LK IH +++ F + +I + + L YA+ +F Q
Sbjct: 13 ELKNPKLSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQ 72
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ PN+F+YN+ IR ++ + + + Y Q R+ ++PD T PF++K+C
Sbjct: 73 IQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNG-----LVPDNLTYPFLVKACTQKG 127
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
+G Q H + + G S +N+L+ +Y ++ A VF ++ D+V+W ++++
Sbjct: 128 SLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVA 187
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GY + G + AR LFDKMP +V+W+ MISGY + +A++++ +Q G+ +E
Sbjct: 188 GYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETV 247
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VSV+ +CA LG+LELGE H Y +N + ++ AL++MY +CG I++A +FDQ+
Sbjct: 248 MVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLP 307
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
RD +SW+T+I G A HG A KA+ F M++ + P +ITF +LSAC+H G GL
Sbjct: 308 GRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLE 367
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
F+SMKRD+ IE ++EHYGC+VDLLGRAG+L +A + EMPMKP+A IWG+LL +CR +
Sbjct: 368 LFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIH 427
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N EIA A + L+ L+PE +G YVLLSNIYA+ +WE+V +R++++ + + K PG +L
Sbjct: 428 KNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTL 487
Query: 492 IEVNNEVQEFVSGDDTKPFLKDI 514
E++ +V +F GD T P ++ I
Sbjct: 488 FEMDGKVHKFTIGDKTHPEIQQI 510
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/504 (41%), Positives = 318/504 (63%), Gaps = 17/504 (3%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
+LK+IH L+ L + FL+ K++ + DL YA LF Q+ +P+V+LYN I+ ++
Sbjct: 3 QLKQIHAYSLRNGLDHTKFLIEKLLQL----PDLPYACTLFDQIPKPSVYLYNKFIQTFS 58
Query: 89 N-NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG 147
+ H + + LY QM + P++++ F+ +CA L G+ +H+H CK G
Sbjct: 59 SIGHPHRCWL-LYCQMCSQGCS-----PNQYSFTFLFPACASLFNVYPGQMLHSHFCKSG 112
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
S ALLD+Y K L A ++F+EM RDI WN+LI+GYAR G M+ A LF+
Sbjct: 113 FASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFN 172
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEISIVSVLPACAQLGSLE 266
KMP ++SWTA+ISGY G YA+AL++F ++ G +P+E+SI SVLPAC+QLG+L+
Sbjct: 173 KMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALD 232
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGL 325
+G+ I Y N + + NA++E++ +CG I +A Q+FD++ +R++ SW+T+I GL
Sbjct: 233 IGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGL 292
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A HG+ A+ L+ +M K+ P+D+TF+GLL AC H G EG F+SM+ + K
Sbjct: 293 AVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPK 352
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+EHYGCLVDLLGRAG L +A N+I+ MPM PD+ IWG+LL +C + N+E+ +A E L
Sbjct: 353 LEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLF 412
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
LEP + GNYV+LSNIYA G W V+R+RK+++ + K G S IEV + + EF+ D
Sbjct: 413 KLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVED 472
Query: 506 DTKPFLKDIFWLL----ELLALHQ 525
+ +I+ LL +++ LH+
Sbjct: 473 RSHLKSGEIYALLHKIYDIIKLHK 496
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/530 (40%), Positives = 325/530 (61%), Gaps = 11/530 (2%)
Query: 1 MAARIGALSIKELEDRFVPILQ-SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG 59
M RI ALS+ + FV L+ NL LK+ H ++ L++ N V K I+ C++
Sbjct: 1 MIQRINALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNA 60
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYT---NNHLYGLAINLYKQMLRDPRTGSLILPD 116
G L YA +F PN +L+N MIRA + + + +AI +Y+++ PD
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLW-----ALCAKPD 115
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
FT PFV+K + G+QIH V FG S L+ +Y C L +A K+F+
Sbjct: 116 TFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFD 175
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP--YTTIVSWTAMISGYTHIGSYAEAL 234
EM +D+ WN L++GY ++G+M +AR L + MP VSWT +ISGY G +EA+
Sbjct: 176 EMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAI 235
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+VF++M M +EPDE+++++VL ACA LGSLELGE I Y D + R + NA+I+MY
Sbjct: 236 EVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMY 295
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
K G I +A +F+ + ER+VV+W+T+I GLA HG +A+ +F+ M + V PND+TFI
Sbjct: 296 AKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFI 355
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM 414
+LSAC+H G+ + G F+SM+ + I IEHYGC++DLLGRAG+L +A +I+ MP
Sbjct: 356 AILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPF 415
Query: 415 KPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRM 474
K +A IWGSLL++ + +LE+ A+ L+ LEP ++GNY+LL+N+Y+ GRW++ M
Sbjct: 416 KANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMM 475
Query: 475 RKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
R +++ +KK G S IEV N V +F+SGD T P ++ I +L+ + L
Sbjct: 476 RNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQ 525
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/486 (41%), Positives = 306/486 (62%), Gaps = 11/486 (2%)
Query: 37 ILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYG 94
+L+ L F +K++ C + G L YA L+F Q+ P F N++IR YTN +L
Sbjct: 1 MLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 60
Query: 95 LAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSIT 154
AI Y+ M+ + PD+FT P + KSC G+LC GKQ+H H K G S +
Sbjct: 61 QAILFYQLMMLQG-----LDPDRFTFPSLFKSC-GVLCE--GKQLHCHSTKLGFASDAYI 112
Query: 155 ENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT- 213
+N L+++Y C L+ A KVF++M ++ +V+W +I YA+ +A LF +M +
Sbjct: 113 QNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASN 172
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
+ W MI+G+ Y EAL +F +MQ+ G++ D++++ S+L AC LG+LELG+W+H+
Sbjct: 173 LFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHV 232
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
Y +K + + AL++MY KCG I A ++F +M E+DV++W+ +I GLA G+ K
Sbjct: 233 YIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLK 292
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
A+ LFHEMQ +V P+ ITF+G+L+AC+H G NEG+ YF+SM + I+ IEHYGC+V
Sbjct: 293 ALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMV 352
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
D+LGRAGR+ +A ++I+ MPM PD + LLS+CR + NL +A A + L+ L+P++ G
Sbjct: 353 DMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGG 412
Query: 454 NYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKD 513
YVLLSNIY+ WE +MR+L+ +++KK PGCS IEV V EFV GD + P +
Sbjct: 413 TYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSE 472
Query: 514 IFWLLE 519
I+ L+
Sbjct: 473 IYETLD 478
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/516 (40%), Positives = 313/516 (60%), Gaps = 38/516 (7%)
Query: 29 ELKKIHTQILKYLLSQ--SNFLVTKMIDVCNSGGDLAYASLLFKQ-VKEPNVFLYNAMIR 85
+L +I QI+ + N + K I V +S G+L ++ L+F + PN+F YNA+++
Sbjct: 39 QLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLK 98
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
A++ ++ + I+ + L P + PD++T V+K+CAGL G+++H V K
Sbjct: 99 AFSQHNAWHTTISYFNNQLVLPNAPN---PDEYTFTSVLKACAGLAQVLEGQKVHCFVTK 155
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY------------ 193
+G +S+ N+L+DLY K A K+F+EM RD+V+WN LISGY
Sbjct: 156 YGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMV 215
Query: 194 -------------------ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
AR+G +++AR LF+ MP +VSW AMI+GY YA+A+
Sbjct: 216 FDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAI 275
Query: 235 DVFRQMQMVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
++FRQMQ G + P+++++VSVL ACA LG+L+LG+WIH + +N + + NAL +M
Sbjct: 276 ELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADM 335
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
Y KCGC+ +A +F +M ERDV+SWS +I GLA +G A++A + F EM + PNDI+F
Sbjct: 336 YAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISF 395
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
+GLL+AC H G ++GL YFD M + + I KIEHYGC+VDLL RAGRLDQA ++I MP
Sbjct: 396 MGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMP 455
Query: 414 MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSR 473
M+P+ +WG+LL CR Y + E + +L L+ +G+ V L+N+YA GR +D +
Sbjct: 456 MQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAAS 515
Query: 474 MRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
R +R KTPGCS IE+NN V EF GD + P
Sbjct: 516 CRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHP 551
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 320/540 (59%), Gaps = 43/540 (7%)
Query: 20 ILQSCENLIELKKIHTQI-LKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVF 78
IL ++ LKK+H++I + + L + L K++ G+ +F ++ + NV
Sbjct: 1033 ILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVV 1092
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+N MIR+Y NNHLY A+ ++K M G I PD +T P V+K+ +G +G Q
Sbjct: 1093 FFNVMIRSYVNNHLYSDALLVFKNM-----AGHGIDPDHYTYPCVLKASSGSEDLWVGMQ 1147
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
IHA V + GL + N L+ +YGKC L+EA +V +ZM RD+V+WN+L++G AR GQ
Sbjct: 1148 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQ 1207
Query: 199 MKKA-------------------------------------RMLFDKMPYTTIVSWTAMI 221
A + +F K+ ++VSW MI
Sbjct: 1208 FDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMI 1267
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
+ Y + AEA+D+F QM+ ++PD ISI SVLPAC L +L LG IH Y + L
Sbjct: 1268 AVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQ 1327
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
++ NALI+MY KCGC+ A ++FDQM RDVVSW+++I +GK A+ LF M
Sbjct: 1328 PNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRM 1387
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
Q L + P+ I F+ +LSAC+H G +EG YF M + I +IEH+ C+VDLLGRAG+
Sbjct: 1388 QDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQ 1447
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
+D+A I++MPM+P+ ++WG+LLS+CR YSN+ I ++A + L L PE +G YVLLSNI
Sbjct: 1448 VDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNI 1507
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
YAK GRWEDV+ +R ++++K +KK PG S E++N V F++GD + P K I+ L++L
Sbjct: 1508 YAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVL 1567
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 190/412 (46%), Gaps = 37/412 (8%)
Query: 98 NLYKQMLRDPRTGSLI-LPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC-----KFGLKSH 151
++ K + +D RT S I L D P + S + PS KQ+ V KF +
Sbjct: 967 SVSKALFQDDRTPSRIKLCDNLIDPVDLISASP---PSAVKQLQTLVLSIQKPKFTQQXV 1023
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNL----ISGYARLGQMKKARMLF 206
+TEN + K ++ K+ ++ D D+ + +L + YA G+ R +F
Sbjct: 1024 VLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIF 1083
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
D++P +V + MI Y + Y++AL VF+ M GI+PD + VL A + L
Sbjct: 1084 DEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLW 1143
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
+G IH + L + N LI MY KCGC+ +A ++ DZM RDVVSW++++ G A
Sbjct: 1144 VGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCA 1203
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+G+ A+ + EM+ L + P+ T LL A +T N + MK +
Sbjct: 1204 RNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKL---ANKSL 1260
Query: 387 EHYGCLVDLLGRAGRLDQALNI---IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+ ++ + +A++I +E+ + PDA S+L +C S L + E+
Sbjct: 1261 VSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEY 1320
Query: 444 LL--VLEPEDTGNYVLLSN----IYAKHGRWE------DVSRMRKLIRSKSM 483
++ L+P +LL N +YAK G E D + R ++ SM
Sbjct: 1321 VVRKRLQPN-----LLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSM 1367
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/497 (39%), Positives = 308/497 (61%), Gaps = 7/497 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
+L+ C N +LK IH +L+ L F +++I C ++ L YA + Q++ PN+
Sbjct: 23 LLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNL 82
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F+YNA+IR + + + + Y + LR +LPD T PF++K+CA L +G
Sbjct: 83 FIYNALIRGCSTSENPENSFHYYIKALRFG-----LLPDNITHPFLVKACAQLENAPMGM 137
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
Q H K G + +N+L+ +Y ++ A VF+ M D+V+W +I+GY R G
Sbjct: 138 QTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCG 197
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
K AR LFD+MP +V+W+ MISGY + +A++ F +Q G+ +E +V V+
Sbjct: 198 DAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVIS 257
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
+CA LG+L +GE H Y +N L ++ A+++MY +CG + +A +F+Q+ E+DV+
Sbjct: 258 SCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLC 317
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I GLA HG A KA+ F EM + P DITF +L+AC+H G GL F+SMK
Sbjct: 318 WTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMK 377
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
RDH +E ++EHYGC+VDLLGRAG+L +A + +MP+KP+A IW +LL +CR + N+E+
Sbjct: 378 RDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVG 437
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
+ LL ++PE +G+YVLLSNIYA+ +W+DV+ MR++++ K ++K PG SLIE++ +
Sbjct: 438 ERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGK 497
Query: 498 VQEFVSGDDTKPFLKDI 514
V EF GD T P ++ I
Sbjct: 498 VHEFTIGDKTHPEIEKI 514
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 309/505 (61%), Gaps = 12/505 (2%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+ + Q +L LK +H +L+ L + ++L+ K++ + G+ Y+ +F Q KEPN+
Sbjct: 14 IRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNI 73
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
FL+N MI N + +I +Y M ++ + PD FT PF++K+CA LL LG
Sbjct: 74 FLFNTMIHGLVLNDSFQESIEIYHSMRKEGLS-----PDSFTFPFLLKACARLLDSKLGI 128
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
++H V K G +S + +L+ LYGKC + A KVF+++ ++++ AW +ISGY +G
Sbjct: 129 KLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVG 188
Query: 198 Q-------MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+ ++A +FD M IVSW++MI GY G EALD+F +M G PD
Sbjct: 189 KCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCY 248
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++V VL ACA+LG+LELG W D+N L V+ ALI+MY KCG ++ A ++F M
Sbjct: 249 AMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGM 308
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
++D+V W+ I GLA G A LF +M++ + P+ TF+GLL AC H G +EG
Sbjct: 309 RKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGR 368
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
YF+SM+R + +IEHYGC+VDLLGRAG LD+A +++ MPM+ +A +WG+LL CR
Sbjct: 369 QYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRL 428
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ + ++ ++ L+ LEP ++GNYVLLSNIY+ +WED +++R ++ + +KK PG S
Sbjct: 429 HRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYS 488
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIF 515
IEV+ V EF+ GD + P + I+
Sbjct: 489 WIEVDGVVHEFLVGDTSHPLSEKIY 513
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/556 (39%), Positives = 327/556 (58%), Gaps = 50/556 (8%)
Query: 12 ELEDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
E+++ ++ +L++C ++L E KKIH LK + + ++ K+ + S + A L
Sbjct: 6 EVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRL 65
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F ++ P+V L+N +IRAY N + AI+LY ML + P+K+T PFV+K+C+
Sbjct: 66 FDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLG-----VRPNKYTYPFVLKACS 120
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
GLL G +IH+H FGL+S AL+D Y KC L+EA ++F M+ RD+VAWN
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 189 LISGYARLG----------QMKK----------------------ARMLFDKMPYTTIVS 216
+I+G + G QM++ AR +FD M VS
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVS 240
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W+AMI GY EALD+FR MQ+ GI+PD +++ VLPAC+ L +L+ H +C
Sbjct: 241 WSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQ-----HGFCS 295
Query: 277 KNHLLRR-----TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
+L+ R T+ICNALI+MY KCG I+ A ++F++M D+VSW+ +I G HG
Sbjct: 296 HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLG 355
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
+A+ LFH++ L + P+DITFI LLS+C+H+G EG ++FD+M RD I ++EH C
Sbjct: 356 MEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCIC 415
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VD+LGRAG +D+A + I MP +PD +IW +LLS+CR + N+E+ + + L PE
Sbjct: 416 MVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPES 475
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFL 511
TGN+VLLSNIY+ GRW+D + +R + +KK PGCS IE+N V FV GD + L
Sbjct: 476 TGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQL 535
Query: 512 KDIFWLLELLALHQDR 527
I LE L + R
Sbjct: 536 SQINRKLEELLVEMKR 551
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/508 (39%), Positives = 320/508 (62%), Gaps = 7/508 (1%)
Query: 9 SIKELEDR-FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
S+K L+ + + +LQ +++ ++ IH Q+++ SQ F+V +++ C+ + YAS
Sbjct: 43 SLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASR 102
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F+ PNV+LY A+I + ++ Y AI LY +ML D ILPD + + ++K+C
Sbjct: 103 IFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDS-----ILPDNYLMASILKAC 157
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
L G+++H+ K GL S+ + +++LYGKC EL +A +VFEEM + D+VA
Sbjct: 158 GSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVAST 216
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+IS Y+ G +++A +F ++ V WTAMI G+ AL+ FR MQ + P
Sbjct: 217 VMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRP 276
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+E +IV VL AC+QLG+LE+G W+H Y K + + NALI MY +CG I++A +F
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D+M +RDV++++T+I GL+ +GK+ +AI LF M ++ P ++TF+G+L+AC+H G +
Sbjct: 337 DEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVD 396
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
G F SM RD+ +E +IEHYGC+VDLLGR GRL++A ++I M M PD + G+LLS+
Sbjct: 397 FGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSA 456
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
C+ + NLE+ + L D+G YVLLS++YA G+W++ +++R ++ M+K P
Sbjct: 457 CKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEP 516
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
GCS IEVNNE+ EF+ GD P + I+
Sbjct: 517 GCSSIEVNNEIHEFLLGDLRHPRKERIY 544
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 309/494 (62%), Gaps = 6/494 (1%)
Query: 18 VPILQSCENLIELKKIHTQ-ILKYLLSQSNFLVTKMIDVC-NSGGDLAYASLLFKQVKEP 75
+ ++ S L ELK+IHTQ ++ LL+ L + + + +L Y++ + Q +P
Sbjct: 13 IALIDSFITLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKP 72
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+F N+MIRAY+ + + Y ++L+ + ++ PD +T F++++CA C +
Sbjct: 73 TLFALNSMIRAYSKSLTPHKSFQFYNKILQ---SNDVMSPDNYTFNFLVRTCAQSACEA- 128
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G +H + K G + E+ L+ +Y + L H+VFE + D+V ++S A+
Sbjct: 129 GPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAK 188
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + AR LFD MP VSW AMI+GY G EAL++F+ MQM G++ +E+S++SV
Sbjct: 189 CGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISV 248
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ AC LG+L+ G+W H Y +KN + + AL++MY KCG +++A ++F +M E++V
Sbjct: 249 VTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNV 308
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
+WST IGGLA +G K + LF M+ + PN+ITFI +L C+ GF +EG +FDS
Sbjct: 309 YTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDS 368
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
MKRDH IE ++EHYGC+VDL GRAGRL++ALN I MP+KP A WG+LL++CR Y N+E
Sbjct: 369 MKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNME 428
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ A L+ +E ++ G YV LSNIYA G W+ VS +R+ ++++ + K PGCS++EVN
Sbjct: 429 LGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVN 488
Query: 496 NEVQEFVSGDDTKP 509
EV EF SGD + P
Sbjct: 489 GEVHEFFSGDKSHP 502
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/539 (39%), Positives = 319/539 (59%), Gaps = 43/539 (7%)
Query: 20 ILQSCENLIELKKIHTQI-LKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVF 78
IL ++ LKK+H++I + + L + L K++ G+ +F ++ + NV
Sbjct: 44 ILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVV 103
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+N MIR+Y NNHLY A+ ++K M G I PD +T P V+K+ +G +G Q
Sbjct: 104 FFNVMIRSYVNNHLYSDALLVFKNM-----AGHGIDPDHYTYPCVLKASSGSEDLWVGMQ 158
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
IHA V + GL + N L+ +YGKC L+EA +V ++M RD+V+WN+L++G AR GQ
Sbjct: 159 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQ 218
Query: 199 MKKA-------------------------------------RMLFDKMPYTTIVSWTAMI 221
A + +F K+ ++VSW MI
Sbjct: 219 FDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMI 278
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
+ Y + AEA+D+F QM+ ++PD ISI SVLPAC L +L LG IH Y + L
Sbjct: 279 AVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQ 338
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
++ NALI+MY KCGC+ A ++FDQM RDVVSW+++I +GK A+ LF M
Sbjct: 339 PNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRM 398
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
Q L + P+ I F+ +LSAC+H G +EG YF M + I +IEH+ C+VDLLGRAG+
Sbjct: 399 QDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQ 458
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
+D+A I++MPM+P+ ++WG+LLS+CR YSN+ I ++A + L L PE +G YVLLSNI
Sbjct: 459 VDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNI 518
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLEL 520
YAK GRWEDV+ +R ++++K +KK PG S E++N V F++GD + P K I+ L++
Sbjct: 519 YAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDV 577
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 312/524 (59%), Gaps = 42/524 (8%)
Query: 19 PILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---LAYASLLFKQV 72
PIL E ++ EL + H ILK L S F +++I ++ + YA +F ++
Sbjct: 9 PILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRI 68
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
PN +++N +IRAY N+ A+ ++ QML + +LPDK+T F +KSC
Sbjct: 69 PNPNSYMWNTIIRAYANSPTPEAALTIFHQMLH-----ASVLPDKYTFTFALKSCGSFSG 123
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKC----------DELIE------------ 170
G+QIH HV K GL +N L+ LY C D ++E
Sbjct: 124 VEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSA 183
Query: 171 ---------AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
A +F+EMT+R++ +WN +ISGY +G +++AR +F + P +VSW AMI
Sbjct: 184 YAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMI 243
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
+GY+H G ++E L +F MQ G++PD ++VSVL ACA +G+L GEW+H Y DKN +
Sbjct: 244 TGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGIS 303
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
+ AL++MY KCG I +A ++F+ + +D+ +W+++I GL+ HG A+ +F EM
Sbjct: 304 IDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEM 363
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
PN++TF+ +LSAC+ G +EG F+ M H I+ IEHYGC+VDLLGR G
Sbjct: 364 LVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGL 423
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
L++A ++++MP K + +W SLL +CR + N+E+A + LL L P+++ ++V LSN+
Sbjct: 424 LEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNM 483
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
YA GRW+DV +R+ +R++ ++K PGCS+IEV+ V EF++G+
Sbjct: 484 YASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAGE 527
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/523 (39%), Positives = 319/523 (60%), Gaps = 24/523 (4%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SGGDLAYASLLFKQVKEPNVFL 79
SC+ +LK++H +K Q ++I C S D+ YA +F+Q+ EPN F
Sbjct: 26 FTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFC 85
Query: 80 YNAMIR--AYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+N ++R A TN+ HL A+ L+ ML D R + P++FT P V+K+CA G
Sbjct: 86 WNTILRVLAETNDEHLQSEALMLFSAMLCDGR----VKPNRFTFPSVLKACARASRLREG 141
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF----------------EEMTD 180
KQIH + KFG + L+ +Y C + +A+ +F + D
Sbjct: 142 KQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQD 201
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
++V WN +I G RLG +K A+ LFD+MP ++VSW MISGY G + EA+++F++M
Sbjct: 202 GNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEM 261
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
Q I+P+ +++VSVLPA A++G+LELG+WIH+Y KN + V+ +AL++MY KCG I
Sbjct: 262 QSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSI 321
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
++A Q+F+ + +R+ ++WS +IG A HG+A AI FH M + V PND+ +IG+LSAC
Sbjct: 322 DEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSAC 381
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
+H G EG +F M + ++ +IEHYGC+VDLLGRAG L++A +I MP++PD I
Sbjct: 382 SHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVI 441
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
W +LL +C+ + NL++ E L+ L P D+G+YV LSN+YA G WE V+R+R ++
Sbjct: 442 WKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKG 501
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
++K PGCS IE++ + EF+ DD+ K+I +L +++
Sbjct: 502 MDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSM 544
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/508 (39%), Positives = 318/508 (62%), Gaps = 7/508 (1%)
Query: 9 SIKELEDR-FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
S+K L+ + + +LQ ++ ++ IH Q+++ SQ F+V +++ C+ + YAS
Sbjct: 43 SLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASR 102
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F+ PNV+LY A+I + ++ Y AI LY +ML + ILPD + + ++K+C
Sbjct: 103 IFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHES-----ILPDNYLMASILKAC 157
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
L G+++H+ K G S+ + +++LYGKC EL +A +VFEEM + D+VA
Sbjct: 158 GSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVAST 216
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+IS Y+ G +++A +F ++ V WTAMI G+ AL+ FR MQ + P
Sbjct: 217 VMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRP 276
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+E +IV VL AC+QLG+LE+G W+H Y K + + NALI MY +CG I++A +F
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D+M +RDV++++T+I GL+ +GK+ +AI LF M ++ P ++TF+G+L+AC+H G +
Sbjct: 337 DEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVD 396
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
G F SM RD+ +E +IEHYGC+VDLLGR GRL++A ++I M M PD + G+LLS+
Sbjct: 397 FGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSA 456
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
C+ + NLE+ + L D+G YVLLS++YA G+W++ +++R ++ M+K P
Sbjct: 457 CKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEP 516
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
GCS IEVNNE+ EF+ GD P + I+
Sbjct: 517 GCSSIEVNNEIHEFLLGDLRHPQKERIY 544
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/508 (40%), Positives = 312/508 (61%), Gaps = 16/508 (3%)
Query: 17 FVPILQSCENLIEL----KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLF--- 69
F P+L++ E +H ++K+ + + + + ++ + + GD A A L
Sbjct: 21 FPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMYAARGDGAVARTLLDAW 80
Query: 70 --KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+ P V +NA+I + + + L+ + M+R TG ++P T V+ +C
Sbjct: 81 PARGGDTPVV--WNALISGHRRSRQFRLSCCSFVDMVR---TG--VVPTPVTYITVLSAC 133
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
LG Q+H V G+ NAL+D+Y +C E+ A ++FE M R+ V+W
Sbjct: 134 GKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWT 193
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
++ISG+ RLGQ+ +AR LFD MP VSWTAMI GY G + EAL++FR+MQ +
Sbjct: 194 SVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRA 253
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
DE ++VSV+ ACAQLG+LE GEW +Y ++ + T + NAL++MY KCG I QA +F
Sbjct: 254 DEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVF 313
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
+M RD +W+ VI GLA +G +AI++F+ M R+ P+++TFIG+L+AC H G +
Sbjct: 314 KEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVD 373
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+G +F SM + I + H+GCL+DLLGRAG+L +AL I MPM+P++ IWG+LL++
Sbjct: 374 KGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAA 433
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR + N EI +A EHLL L+ E+ Y+LLSN+YAK RWEDV R+R++I K +KK P
Sbjct: 434 CRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEP 493
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
GCSLIE+N + EF++GD + P K+I+
Sbjct: 494 GCSLIEMNGTIHEFIAGDRSHPMSKEIY 521
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 169/355 (47%), Gaps = 23/355 (6%)
Query: 115 PDKFTLPFVIKS-CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHK 173
PD +T P ++K+ A ++G +HAHV KFG++ ++ ++L+ +Y + A
Sbjct: 16 PDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMYAARGDGAVART 75
Query: 174 VFEEMTDRD---IVAWNNLISGYARLGQMKKARMLFDKMPYT----TIVSWTAMISGYTH 226
+ + R V WN LISG+ R Q + + F M T T V++ ++S
Sbjct: 76 LLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGK 135
Query: 227 IGSYAEALDVFRQMQMVGIEPD---EISIVSVLPACAQL-GSLELGEWIHMYCDKNHLLR 282
+ V + + G+ PD +++ + C+++ + EL E + +R
Sbjct: 136 DKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGME--------VR 187
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
TV ++I +++ G ++QA LFD M ERD VSW+ +I G G+ +A+ +F EMQ
Sbjct: 188 NTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQ 247
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
KV ++ T + +++ACA G G M R H I+ LVD+ + G +
Sbjct: 248 FSKVRADEFTMVSVVTACAQLGALETGEWARIYMSR-HGIKMDTFVGNALVDMYSKCGSI 306
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL-VLEPEDTGNYV 456
QAL + +EM ++ D W +++ + E A+ +L V E D ++
Sbjct: 307 QQALGVFKEMYIR-DKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFI 360
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/502 (41%), Positives = 311/502 (61%), Gaps = 6/502 (1%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYN 81
C + +L+KIH +LK L++ V+ ++ C + GGD+ YA L+F Q+ PN+F +N
Sbjct: 34 CTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNLFSWN 93
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
+IR ++ + AI+L+ ML S + P + T P V K+ A L G Q+H
Sbjct: 94 TIIRGFSQSSTPHHAISLFIDML----IVSSVQPHRLTYPSVFKAYAQLGLAHYGAQLHG 149
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
V K GL+ N ++ +Y C L E K F E D DIVAWN++I G A+ G++ +
Sbjct: 150 RVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGEVDE 209
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
+R LFD+MP VSW +MISGY G EALD+F QMQ I+P E ++VS+L A A+
Sbjct: 210 SRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASAR 269
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
LG+L+ GEWIH Y KN+ ++ ++I+MY KCG I +A Q+F+ + + SW+T+
Sbjct: 270 LGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTM 329
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I GLA +G ++AI LF ++ + P+D+TF+G+L+AC ++G ++ YF M + +
Sbjct: 330 ILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKTYK 389
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
IE I+HY C+VD LGRAG L++A +I MP+ PDA IW SLLS+CR + N+E+A A
Sbjct: 390 IEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNVELAKRAA 449
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
+H++ L+ D+ YVLLSNIYA ++E+ R ++ K ++K PGCSLIEVN E+ EF
Sbjct: 450 KHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIEVNGEIHEF 509
Query: 502 VSGDDTKPFLKDIFWLLELLAL 523
V+G P ++++ LL L +
Sbjct: 510 VAGGRLHPQAQEVYSLLNELGM 531
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/523 (39%), Positives = 319/523 (60%), Gaps = 24/523 (4%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SGGDLAYASLLFKQVKEPNVFL 79
SC+ +LK++H +K Q ++I C S D+ YA +F+Q+ EPN F
Sbjct: 26 FTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFC 85
Query: 80 YNAMIR--AYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+N ++R A TN+ HL A+ L+ ML D R + P++FT P V+K+CA G
Sbjct: 86 WNTILRILAETNDEHLQSEALMLFSAMLCDGR----VKPNRFTFPSVLKACARASRLREG 141
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF----------------EEMTD 180
KQIH + KFG + L+ +Y C + +A+ +F + D
Sbjct: 142 KQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQD 201
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
++V WN +I G RLG +K A+ LFD+MP ++VSW MISGY G + EA+++F++M
Sbjct: 202 GNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEM 261
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
Q I+P+ +++VSVLPA A++G+LELG+WIH+Y KN + V+ +AL++MY KCG I
Sbjct: 262 QSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSI 321
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
++A Q+F+ + +R+ ++WS +IG A HG+A AI FH M + V PND+ +IG+LSAC
Sbjct: 322 DKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSAC 381
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
+H G EG +F M + ++ +IEHYGC+VDLLGRAG L++A +I MP++PD I
Sbjct: 382 SHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVI 441
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
W +LL +C+ + NL++ E L+ L P D+G+YV LSN+YA G WE V+R+R ++
Sbjct: 442 WKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKG 501
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
++K PGCS IE++ + EF+ DD+ K+I +L +++
Sbjct: 502 MDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSM 544
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/537 (38%), Positives = 323/537 (60%), Gaps = 38/537 (7%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID---VCNSGGDLAYASLLFKQV 72
+ + +LQ+ L ++ +IH I+K L +NF++ K++ C+S DL YA +F ++
Sbjct: 5 KVMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEI 64
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
P+ F++N MIRAY N+ +++L+ QM R I D ++L VI++C L
Sbjct: 65 PSPDTFIWNTMIRAYLNSQNPQESMSLFFQM----RHQECIPIDSYSLSLVIQACGRLKD 120
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
P G+++H V K GL S E AL+++Y K ++ A + +EM D+V +N L++
Sbjct: 121 PGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAE 180
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG------------------------ 228
Y R+G++ A LFD+MP +VSW MI G+ +G
Sbjct: 181 YVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMI 240
Query: 229 -SYA------EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
+YA EAL +F +MQ+ + PD++++VSVL AC +G+L +G+ IH ++N +
Sbjct: 241 AAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIE 300
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
+ +L++MY KCG I+ + ++F+ M RDV +WS +I GLANHG A+ F +M
Sbjct: 301 IDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKM 360
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+ PND+TFIG+LSAC+H G +EG YF SM + + + KIEHYGC+VD+LGRAGR
Sbjct: 361 ISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGR 420
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
L +A+ +I+ MP PDA +W +LL +CR Y N+EIA A +LL LEP GNYVLLSNI
Sbjct: 421 LQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNI 480
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
Y++ W+ V +R+++++ +++K PG S IEV+N V EFV+GD + P K I +L
Sbjct: 481 YSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRML 537
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/499 (40%), Positives = 311/499 (62%), Gaps = 9/499 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP-NVF 78
+L C NL L + H +L L N L++ I +S G YA LF + P N+F
Sbjct: 17 LLNHCSNLKHLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLTHPPNIF 76
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
LYN +IRA + + L+I L+ ++ + + PD ++ PF +K+ L G Q
Sbjct: 77 LYNTIIRALSLSPQPSLSIFLFNRI-----QSARLRPDSYSFPFALKAVIRLSATKTGLQ 131
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE--EMTDRDIVAWNNLISGYARL 196
H+ +FGL SH +L+ +Y + +A K+F+ +T R++ WN +++ YA++
Sbjct: 132 FHSQAIRFGLHSHLHVLVSLIRMYSS-SHISDARKLFDGIPLTARNVALWNAMLTSYAKI 190
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
M A+ LFD MP ++SWTA+ISGY HI +A+ +FR MQ+ + PDEI++++VL
Sbjct: 191 CDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLAVL 250
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACAQLG+LELGEWI Y D + L R + NALI+MY K G I +A +F+ M + +V
Sbjct: 251 SACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIV 310
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+T+I GLA HG +A+ +F M+R +V PN+ITFI +LSAC+H G +F +M
Sbjct: 311 TWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNM 370
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ + I+ KIEHYGC++DLLGRAG L +A ++++MP +P+A IWGSLL++ T+ + +
Sbjct: 371 RSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAML 430
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
++HL+ LEP ++GNY LLSNIYA GRW+ +RK++R + +KK PG S IEVNN
Sbjct: 431 GERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFIEVNN 490
Query: 497 EVQEFVSGDDTKPFLKDIF 515
V EF++G+ + P +I+
Sbjct: 491 RVNEFIAGETSHPQFDEIY 509
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/580 (36%), Positives = 333/580 (57%), Gaps = 74/580 (12%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID-VCNSGGDLAYASLLFK 70
+L++ + +LQ + ++ +IH Q++ L F ++++D V + ++ YA L+F
Sbjct: 9 QLKNPLLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFA 68
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
Q+ +PN F+ N M++ YT + A+ Y +M R +L D +T PFV+K+C G
Sbjct: 69 QIHQPNSFICNTMVKCYTESSTPERALRFYAEMRRKG-----LLGDNYTYPFVLKAC-GA 122
Query: 131 LCPSL-GKQIHAHVCKFGLKSHSITENALLDLYGK------------------------- 164
+C L G + K G N L+ +Y +
Sbjct: 123 MCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSM 182
Query: 165 ------CDELIEAHKVFEEMTDRDIVAWNNLISGYAR-LGQMKKARMLFDKMPYTTIVSW 217
C E+ A +F+EM +RD+V+W+ +I GY + +G++ +AR+ FD MP +VSW
Sbjct: 183 LGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSW 242
Query: 218 TAMISGYTHIG-------------------------SYA------EALDVFRQMQMVGIE 246
+MI GY +G YA EAL++FRQM GI+
Sbjct: 243 NSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIK 302
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD +S+V + AC+QLG+L+ G WIH+Y +N +L V+ AL++MY+KCG ++A ++
Sbjct: 303 PDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRI 362
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F+ M ER+VVSW+ +I GL +G +A+ F +M+ ++P +D+ F+G+L AC+H
Sbjct: 363 FNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLV 422
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
EGL F+ MK + +E K+EHYGCLVDLLGRAG+LDQ NII+ MPMKP+A +WGSLL
Sbjct: 423 TEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLL 482
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+CR + N+ +A I +E L L+ +D+G YVL+SNIYA G WE + R+RKL++ + MKK
Sbjct: 483 ACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKD 542
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDI---FWLLELLAL 523
G S+IEV+ V+EFVSG+ + ++I W L +A+
Sbjct: 543 IGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAKMAM 582
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/519 (38%), Positives = 318/519 (61%), Gaps = 9/519 (1%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ +L+SC+N+ + IH +I++ Q F+V ++I VC++ + YA +F V PN
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V+LY AMI + ++ ++LY +M+ + +LPD + + V+K+C +C
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNS-----VLPDNYVITSVLKACDLKVC---- 142
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
++IHA V K G S ++++YGK EL+ A K+F+EM DRD VA +I+ Y+
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G +K+A LF + V WTAMI G +AL++FR+MQM + +E + V VL
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+ LG+LELG W+H + + + + NALI MY +CG IN+A ++F M ++DV+
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 322
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
S++T+I GLA HG + +AI+ F +M PN +T + LL+AC+H G + GL F+SM
Sbjct: 323 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
KR ++E +IEHYGC+VDLLGR GRL++A IE +P++PD + G+LLS+C+ + N+E+
Sbjct: 383 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMEL 442
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ L E D+G YVLLSN+YA G+W++ + +R+ +R ++K PGCS IEV+N
Sbjct: 443 GEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDN 502
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIM 535
++ EF+ GD P + I+ L+ L ++ IDI+
Sbjct: 503 QIHEFLVGDIAHPHKEAIYQRLQELNRILRFKENQIDII 541
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 144/324 (44%), Gaps = 13/324 (4%)
Query: 105 RDPRTGSLILPDKFTLPFVIKSCAGLL-CPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
RDP + +L L + TL V++SC + PS IHA + + + L+ +
Sbjct: 17 RDPDSNTLRLSRRKTLISVLRSCKNIAHVPS----IHAKIIRTFHDQDAFVVFELIRVCS 72
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
D + A+ VF +++ ++ + +I G+ G+ L+ +M + +++ +I+
Sbjct: 73 TLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITS 132
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL-ELGEWIHMYCDKNHLLR 282
++ Q+ +G + ++ + G L + D++H
Sbjct: 133 VLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDH--- 189
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
V +I Y +CG I +A +LF + +D V W+ +I GL + + +KA+ LF EMQ
Sbjct: 190 --VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQ 247
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
V N+ T + +LSAC+ G G + S + +E L+++ R G +
Sbjct: 248 MENVSANEFTAVCVLSACSDLGALELG-RWVHSFVENQRMELSNFVGNALINMYSRCGDI 306
Query: 403 DQALNIIEEMPMKPDAKIWGSLLS 426
++A + M K D + +++S
Sbjct: 307 NEARRVFRVMRDK-DVISYNTMIS 329
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 313/539 (58%), Gaps = 42/539 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L ++ LK +H+++ ++ L K++ + G+ A +F + E NV
Sbjct: 41 VLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIF 100
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
YN MIR+Y NNHLY A+ +++ M+ +G PD +T P V+K+C+ +G Q+
Sbjct: 101 YNVMIRSYMNNHLYDDALLVFRDMV----SGGFS-PDHYTYPCVLKACSCSDNLRIGLQL 155
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H V K GL + N L+ LYGKC L EA V +EM +D+V+WN++++GYA+ Q
Sbjct: 156 HGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQF 215
Query: 200 KKA-------------------------------------RMLFDKMPYTTIVSWTAMIS 222
A +F + ++VSW MIS
Sbjct: 216 DDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMIS 275
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
Y +++D++ QM +EPD I+ SVL AC L +L LG IH Y ++ L
Sbjct: 276 VYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCP 335
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
++ N+LI+MY +CGC+ A ++FD+M RDV SW+++I G+ + A+ LF EMQ
Sbjct: 336 NMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQ 395
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
P+ I F+ +LSAC+H+G NEG YF M D+ I IEH+ CLVDLLGR+GR+
Sbjct: 396 NSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRV 455
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIY 462
D+A NII++MPMKP+ ++WG+LLSSCR YSN++I ++A + LL L PE++G YVLLSNIY
Sbjct: 456 DEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIY 515
Query: 463 AKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
AK GRW +V+ +R L++ + ++K PG S +E+NN+V F++GD P K+I+ L +L
Sbjct: 516 AKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVL 574
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/580 (36%), Positives = 332/580 (57%), Gaps = 74/580 (12%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID-VCNSGGDLAYASLLFK 70
+L++ + +LQ + ++ +IH Q++ L F ++++D V + ++ YA L+F
Sbjct: 9 QLKNPLLSLLQXSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFA 68
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
Q+ +PN F+ N M++ YT + A+ Y +M + +L D +T PFV+K+C G
Sbjct: 69 QIHQPNSFICNTMVKCYTESSTPERALRFYAEMRKKG-----LLGDNYTYPFVLKAC-GA 122
Query: 131 LCPSL-GKQIHAHVCKFGLKSHSITENALLDLYGK------------------------- 164
+C L G + K G N L+ +Y +
Sbjct: 123 MCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSM 182
Query: 165 ------CDELIEAHKVFEEMTDRDIVAWNNLISGYAR-LGQMKKARMLFDKMPYTTIVSW 217
C E+ A +F+EM +RD+V+W+ +I GY + +G++ +AR+ FD MP +VSW
Sbjct: 183 LGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSW 242
Query: 218 TAMISGYTHIG-------------------------SYA------EALDVFRQMQMVGIE 246
+MI GY +G YA EAL++FRQM GI+
Sbjct: 243 NSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIK 302
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD +S+V + AC+QLG+L+ G WIH+Y +N +L V+ AL++MY+KCG ++A +
Sbjct: 303 PDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXI 362
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F+ M ER+VVSW+ +I GL +G +A+ F +M+ ++P +D+ F+G+L AC+H
Sbjct: 363 FNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLV 422
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
EGL F+ MK + +E K+EHYGCLVDLLGRAG+LDQ NII+ MPMKP+A +WGSLL
Sbjct: 423 TEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLL 482
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+CR + N+ +A I +E L L+ +D+G YVL+SNIYA G WE + R+RKL++ + MKK
Sbjct: 483 ACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKD 542
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDI---FWLLELLAL 523
G S+IEV+ V+EFVSG+ + ++I W L +A+
Sbjct: 543 IGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAKMAM 582
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/486 (38%), Positives = 309/486 (63%), Gaps = 5/486 (1%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
S++++E + + +L + + L +IH L++ L SN +++ + VC S + YA+ +
Sbjct: 4 SLQKIESKILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTI 63
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F PN+ L+N++I+A+++ + + + + M + ILPD FT P ++K+ +
Sbjct: 64 FNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLM----KMTHNILPDNFTFPPLLKATS 119
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
L LG+ +HAHV G HS E LL++Y C ++ +A+KVF+EM R++V WN
Sbjct: 120 YLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNI 179
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+I+G+ ++G ++ LF +M ++VSW MIS EA +FR+M G EPD
Sbjct: 180 MINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPD 239
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLF 307
+ ++V+VLP CA+LG ++ GEWIH Y D LLR+ + + N+L++ Y KCG + A ++F
Sbjct: 240 DATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVF 299
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
++M +++VVSW+ +I GL +GK + LF +M R V P+D TF+G+L+ CAH GF +
Sbjct: 300 NEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVD 359
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+G FDSM + K+EHYGC+VDLLGR G + +A ++I MP+ P+A +WG+LLS+
Sbjct: 360 KGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSA 419
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CRT+ + E+A IA + L+ LEP ++GNYVLLSN+YA+ +W +V ++R L++ +KK P
Sbjct: 420 CRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNP 479
Query: 488 GCSLIE 493
G S ++
Sbjct: 480 GQSALQ 485
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/509 (39%), Positives = 311/509 (61%), Gaps = 15/509 (2%)
Query: 20 ILQSCENLIELKKIHTQILKY-----LLSQSNFLVT-KMIDVCNSGGDLAYASLLFKQVK 73
+L+ C N+ EL +IH Q+LK L+ S LV+ I++ N LAY ++F +
Sbjct: 16 LLERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVN----LAYTRVVFDSIS 71
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
PN ++N M+RAY+N++ A+ LY QML + + + +T PF++K+C+ L
Sbjct: 72 SPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNS-----VPHNSYTFPFLLKACSALSAF 126
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+QIHAH+ K G N+LL +Y + AH +F ++ RDIV+WN +I GY
Sbjct: 127 EETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGY 186
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G + A +F MP ++SWT MI G+ IG + EAL + +QM + GI+PD I++
Sbjct: 187 IKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLS 246
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
L ACA LG+LE G+WIH Y +KN + V+ L +MY+KCG + +A +F ++ ++
Sbjct: 247 CSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKK 306
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
V +W+ +IGGLA HGK +A+ F +MQ+ + PN ITF +L+AC+H G EG F
Sbjct: 307 CVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLF 366
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM ++I+ +EHYGC+VDL+GRAG L +A IE MP+KP+A IWG+LL++C+ + +
Sbjct: 367 ESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKH 426
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
E+ + L+ L+P+ +G Y+ L++IYA G W V R+R I+ + + PGCS I
Sbjct: 427 FELGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSIT 486
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+N V EF +GD + P +++I+ + LLA
Sbjct: 487 LNGVVHEFFAGDGSHPHIQEIYGMPNLLA 515
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/510 (38%), Positives = 314/510 (61%), Gaps = 8/510 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
KK+H ++K+ L + ++ ++ + + G + A +F + + +VF +N MI Y
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
Y +I L +M R+ L+ P TL V+ +C+ + L K++H +V + +
Sbjct: 215 KEYEESIELLVEMERN-----LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
ENAL++ Y C E+ A ++F M RD+++W +++ GY G +K AR FD+MP
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+SWT MI GY G + E+L++FR+MQ G+ PDE ++VSVL ACA LGSLE+GEW
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
I Y DKN + V+ NALI+MY KCGC +A ++F M +RD +W+ ++ GLAN+G+
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+AI +F +MQ + + P+DIT++G+LSAC H+G ++ +F M+ DH IE + HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C+VD+LGRAG + +A I+ +MPM P++ +WG+LL + R +++ +A +A + +L LEP+
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
+ Y LL NIYA RW+D+ +R+ I ++KKTPG SLIEVN EFV+GD +
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQ 629
Query: 511 LKDIFWLLELLALHQDRAK---DVIDIMYE 537
++I+ LE LA A D ++++E
Sbjct: 630 SEEIYMKLEELAQESTFAAYLPDTSELLFE 659
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 208/457 (45%), Gaps = 84/457 (18%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQ-ILKYLLSQSNFLVTKMIDVCNS-GGDLAYAS 66
SI RF+ IL C+ + K++H+Q I + + F + C+ GG ++YA
Sbjct: 29 SISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAY 88
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI-- 124
LF ++ EP+V ++N MI+ ++ G + LY ML++ T PD T PF++
Sbjct: 89 KLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVT-----PDSHTFPFLLNG 143
Query: 125 --KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
+ L C GK++H HV KFGL S+ +NAL+ +Y C + A VF+ D
Sbjct: 144 LKRDGGALAC---GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+ +WN +ISGY R+ + Y E++++ +M+
Sbjct: 201 VFSWNLMISGYNRMKE-------------------------------YEESIELLVEMER 229
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
+ P ++++ VL AC+++ +L + +H Y + + NAL+ Y CG ++
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDI 289
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKA------------------------------- 331
A ++F M RDV+SW++++ G G
Sbjct: 290 AVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCF 349
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG---LMYFDSMKRDHHIEHKIEH 388
++++ +F EMQ + P++ T + +L+ACAH G G Y D K I++ +
Sbjct: 350 NESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK----IKNDVVV 405
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
L+D+ + G ++A + +M + D W +++
Sbjct: 406 GNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMV 441
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 18/294 (6%)
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A LF K+P +V W MI G++ + E + ++ M G+ PD + +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 257 PACAQ-LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ G+L G+ +H + K L + NAL++MY CG ++ A +FD+ + DV
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
SW+ +I G + ++I L EM+R V P +T + +LSAC+ + D
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK-------VKDKDL 254
Query: 376 MKRDHH------IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
KR H E + LV+ G +D A+ I M + D W S++
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYV 313
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
NL++A + + V D ++ ++ + Y + G + + + + ++S M
Sbjct: 314 ERGNLKLARTYFDQMPV---RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/510 (38%), Positives = 314/510 (61%), Gaps = 8/510 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
KK+H ++K+ L + ++ ++ + + G + A +F + + +VF +N MI Y
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
Y +I L +M R+ L+ P TL V+ +C+ + L K++H +V + +
Sbjct: 215 KEYEESIELLVEMERN-----LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
ENAL++ Y C E+ A ++F M RD+++W +++ GY G +K AR FD+MP
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+SWT MI GY G + E+L++FR+MQ G+ PDE ++VSVL ACA LGSLE+GEW
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
I Y DKN + V+ NALI+MY KCGC +A ++F M +RD +W+ ++ GLAN+G+
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+AI +F +MQ + + P+DIT++G+LSAC H+G ++ +F M+ DH IE + HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C+VD+LGRAG + +A I+ +MPM P++ +WG+LL + R +++ +A +A + +L LEP+
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
+ Y LL NIYA RW+D+ +R+ I ++KKTPG SLIEVN EFV+GD +
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQ 629
Query: 511 LKDIFWLLELLALHQDRAK---DVIDIMYE 537
++I+ LE LA A D ++++E
Sbjct: 630 SEEIYMKLEELAQESTFAAYLPDTSELLFE 659
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 208/457 (45%), Gaps = 84/457 (18%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQ-ILKYLLSQSNFLVTKMIDVCNS-GGDLAYAS 66
SI RF+ IL C+ + K++H+Q I + + F + C+ GG ++YA
Sbjct: 29 SISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAY 88
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI-- 124
LF ++ EP+V ++N MI+ ++ G + LY ML++ T PD T PF++
Sbjct: 89 KLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVT-----PDSHTFPFLLNG 143
Query: 125 --KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
+ L C GK++H HV KFGL S+ +NAL+ +Y C + A VF+ D
Sbjct: 144 LKRDGGALAC---GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+ +WN +ISGY R+ + Y E++++ +M+
Sbjct: 201 VFSWNLMISGYNRMKE-------------------------------YEESIELLVEMER 229
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
+ P ++++ VL AC+++ +L + +H Y + + NAL+ Y CG ++
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDI 289
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKA------------------------------- 331
A ++F M RDV+SW++++ G G
Sbjct: 290 AVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCF 349
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG---LMYFDSMKRDHHIEHKIEH 388
++++ +F EMQ + P++ T + +L+ACAH G G Y D K I++ +
Sbjct: 350 NESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK----IKNDVVV 405
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
L+D+ + G ++A + +M + D W +++
Sbjct: 406 GNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMV 441
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 18/294 (6%)
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A LF K+P +V W MI G++ + E + ++ M G+ PD + +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 257 PACAQ-LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ G+L G+ +H + K L + NAL++MY CG ++ A +FD+ + DV
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
SW+ +I G + ++I L EM+R V P +T + +LSAC+ + D
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK-------VKDKDL 254
Query: 376 MKRDHH------IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
KR H E + LV+ G +D A+ I M + D W S++
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYV 313
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
NL++A + + V D ++ ++ + Y + G + + + + ++S M
Sbjct: 314 ERGNLKLARTYFDQMPV---RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/491 (39%), Positives = 304/491 (61%), Gaps = 6/491 (1%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H +K +++ ++ + GDL+ A LFK + +V +N+MI A+ +
Sbjct: 148 VHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNC 207
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
A+ L+ +M R+ ++P+ T+ V+ +CA L G+ + +++ + G+K
Sbjct: 208 PEDALELFLKMEREN-----VMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDL 262
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
NA+LD+Y KC + +A K+F+EM +RD+ +W ++ GYA++G AR++F+ MP
Sbjct: 263 TLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVK 322
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI-EPDEISIVSVLPACAQLGSLELGEWI 271
I +W +IS Y G EAL +F ++Q+ I +PDE+++VS L ACAQLG+++LG WI
Sbjct: 323 EIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWI 382
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H+Y + ++ + ++L++MY KCG + +A ++F + ERDV WS +I GL HG+
Sbjct: 383 HVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRG 442
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
AI LF EMQ KV PN +TF +L AC+H G +EG ++F M+ + + +++HY C
Sbjct: 443 KAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYAC 502
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VD+LGRAG L++A+ +I EM P A +WG+LL +C + N+E+ +A + LL LEP +
Sbjct: 503 MVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRN 562
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFL 511
G VLLSNIYAK GRWE VS +RKL+R +KK PGCS IE N V EF+ GD+T P
Sbjct: 563 HGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLS 622
Query: 512 KDIFWLLELLA 522
+I+ LE +A
Sbjct: 623 SNIYSKLEEIA 633
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 216/446 (48%), Gaps = 73/446 (16%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVK 73
+ + + C + +LK++H ++L+ L F +K+ +S L YA LF Q+
Sbjct: 27 QILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIP 86
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+PN++ +N +IRAY ++ + ++ +L LP+KFT PFVIK+ + L
Sbjct: 87 QPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCED----LPNKFTFPFVIKAASELKAS 142
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+G +H K N+L+ YG C +L A ++F+ ++ +D+V+WN++IS +
Sbjct: 143 RVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAF 202
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE-ALDVFRQMQMVGIEPDEISI 252
A+ G+ E AL++F +M+ + P+ +++
Sbjct: 203 AQ--------------------------------GNCPEDALELFLKMERENVMPNSVTM 230
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V VL ACA+ LE G W+ Y ++ + +CNA+++MY KCG ++ A +LFD+M E
Sbjct: 231 VGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPE 290
Query: 313 RDVVSWSTVIGGLA-------------------------------NHGKAHKAIHLFHEM 341
RDV SW+ ++ G A +GK +A+ +F+E+
Sbjct: 291 RDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNEL 350
Query: 342 QRLKVP-PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
Q K+ P+++T + LSACA G + G +KR+ I LVD+ + G
Sbjct: 351 QLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKRE-GIVLNCHLISSLVDMYAKCG 409
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLS 426
L++AL + + + D +W ++++
Sbjct: 410 SLEKALEVFYSVEER-DVYVWSAMIA 434
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 322/573 (56%), Gaps = 70/573 (12%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
LE+ F+ +L+SC+ + L+K+ QI+ + + ++ ++ +A+A LF
Sbjct: 24 LEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHF 83
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR-DPRTGSLILPDKFTLPFVIKSCAGLL 131
+P V L+NA+ R Y +N Y + L+ +M D R P+ FT P V+KSCA +
Sbjct: 84 PDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVR------PNCFTFPLVLKSCAKIG 137
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGK--------------------------- 164
G++IH V K GL+ + L+D+Y
Sbjct: 138 AFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMIS 197
Query: 165 ----CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT-------- 212
C+ + A ++F+ +RD+V WN ++SGY +G MK AR LFD MPY
Sbjct: 198 GYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTM 257
Query: 213 -----------------------TIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPD 248
+ SW +I GY H G + E L F++M + G + P+
Sbjct: 258 LNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPN 317
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+ ++V+VL ACA+LG+L+LG+W+H+Y + NALI+MY KCG I A ++F+
Sbjct: 318 DATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFE 377
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M +D+++W+++I GLA HG A+ LFH+M+ P+ ITFIG+L +C H G E
Sbjct: 378 SMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEE 437
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G YF+SM ++ I +IEHYGC+VDL GRAG LD+A+ ++ MPM+ DA IW +LL +C
Sbjct: 438 GTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGAC 497
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R Y N+++A +A++ L+VLEP++ NYVLLSNIY GRW+DV+R++ L+R KK PG
Sbjct: 498 RIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPG 557
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
CSLIEVN+ V EF S D+ K+I+ +L+ L
Sbjct: 558 CSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGL 590
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/520 (37%), Positives = 322/520 (61%), Gaps = 17/520 (3%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SGGDLAYASLLFKQ 71
L FV L+ C NL LK++ ++ + SQ+ F K++ CN + DL YA +F
Sbjct: 42 LNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDN 101
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ PNVFLY AMI AY + A LY+ M+R I P+ F P V++SC +L
Sbjct: 102 LTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRR----GAIRPNNFIYPHVLRSCPDVL 157
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGK-CDELIEAHKVFEEMTDRDIVAWNNLI 190
+ K +H V K G + + + A++D Y + ++ A ++F+EM +R +V+W +I
Sbjct: 158 GSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMI 217
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE---- 246
SGYARLG A LF+ MP + +W A+I+G G + EA+ +F++M ++ +E
Sbjct: 218 SGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNN 277
Query: 247 -----PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
P++ ++ S L AC G L LG+WIH Y K + + + I NAL++MY KCG +
Sbjct: 278 DRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLK 337
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK--VPPNDITFIGLLSA 359
A ++FD + +++ SW+++I LA HG + AI LF E+ V PN++TF+G+L+A
Sbjct: 338 VARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNA 397
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C H G +G YF+ M+RD+ IE +IEH+GCL+DLLGRAGR ++A+ ++ M ++PD
Sbjct: 398 CTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEV 457
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
+WGSLL++C+ + ++A +++ L+ ++P++ G ++L+NIYA+ G+W++V ++R+L++
Sbjct: 458 VWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLK 517
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
K+ KTPGCS IEV+N+V +F S D + P +++I+ LE
Sbjct: 518 EKNAYKTPGCSWIEVDNQVYQFYSFDMSHPSVEEIYKTLE 557
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/471 (41%), Positives = 301/471 (63%), Gaps = 12/471 (2%)
Query: 42 LSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE-PNVFLYNAMIRAYTNNHLYGLA-INL 99
L N L+++ I C+S G +YA LF + P+++LYN +I+A +++ + A I L
Sbjct: 6 LDTDNLLLSRFIHACSSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPKASIFL 65
Query: 100 YKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALL 159
Y + + + PD ++ PF +K+ G+Q+H+ +FGL S A +
Sbjct: 66 YNNIQL-----AGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFV 120
Query: 160 DLYGKCDE--LIEAHKVFE--EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
+Y + +A K+F+ M+ D+ WN +++GYA+ G + AR LF++MP ++
Sbjct: 121 QMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVI 180
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
SWTA+I+GY +A+ +FR+MQ+ +EPDEI+++ L ACA+LG+LELGEWI Y
Sbjct: 181 SWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYI 240
Query: 276 DKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
D+ LL + + NALI+MY K G I A Q+F+ M + +++W+T+I GLA HG +A
Sbjct: 241 DRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEA 300
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVD 394
+ +F M+R +V PNDITFI +LSAC+H G G YF+ M + IE KIEHYGC++D
Sbjct: 301 LEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMID 360
Query: 395 LLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGN 454
LLGRAG L +A ++ +MP +P+A IWGSLL++C T+ + E+ +A++HLL LEP+++GN
Sbjct: 361 LLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGN 420
Query: 455 YVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
Y LLSNIYA GRW + +RK++ +KK PG SLIEVNN V EF++G+
Sbjct: 421 YALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGE 471
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 41 LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLY 100
LL+ + L +ID+ GD+ A +F+ + + + MI + L A+ ++
Sbjct: 245 LLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMF 304
Query: 101 KQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK-QIHAHVCKFGLKSHSITENALL 159
+M R + + P+ T ++ +C+ + G+ + + ++G++ ++
Sbjct: 305 SRMER-----ARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMI 359
Query: 160 DLYGKCDELIEAHKVFEEMT-DRDIVAWNNLISG 192
DL G+ L EA + +M + + V W +L++
Sbjct: 360 DLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAA 393
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 326/524 (62%), Gaps = 28/524 (5%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG--DLAYASLLFKQVKEP 75
VP +++C+++ ELK++H ++K + N + T+++ + + D+ YA +F Q+ E
Sbjct: 19 VPQIKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPER 78
Query: 76 NVFLYNAMIRAYT---NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
N F +N +IRA + HL L + + QML + + + P++FT P V+K+CA +
Sbjct: 79 NCFAWNTVIRALAETQDRHLDALLV--FCQMLSE----ATVEPNQFTFPSVLKACAVMAR 132
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF----------------E 176
+ GKQ+H + KFGL LL +Y C + +A+ +F E
Sbjct: 133 LAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDE 192
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
+ ++V N ++ GYAR+G +K AR LFD+M ++VSW MISGY G Y EA+++
Sbjct: 193 RGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEI 252
Query: 237 F-RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
F R MQM + P+ +++VSVLPA ++LG LELG+W+H+Y +KN + V+ +AL++MY
Sbjct: 253 FHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYA 312
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
KCG I +A Q+F+++ + +V++W+ VIGGLA HGKA+ + M++ + P+D+T+I
Sbjct: 313 KCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIA 372
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+LSAC+H G +EG +F+ M ++ KIEHYGC+VDLLGRAG L++A +I MPMK
Sbjct: 373 ILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMK 432
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
PD IW +LL + + + N++I + A E L+ + P D+G YV LSN+YA G W+ V+ +R
Sbjct: 433 PDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVR 492
Query: 476 KLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
+++ ++K PGCS IE++ + EF+ DD+ KDI +LE
Sbjct: 493 LMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLE 536
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 322/573 (56%), Gaps = 70/573 (12%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
LE+ F+ +L+SC+ + L+K+ QI+ + + ++ ++ +A+A LF
Sbjct: 66 LEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHF 125
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR-DPRTGSLILPDKFTLPFVIKSCAGLL 131
+P V L+NA+ R Y +N Y + L+ +M D R P+ FT P V+KSCA +
Sbjct: 126 PDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVR------PNCFTFPLVLKSCAKIG 179
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGK--------------------------- 164
G++IH V K GL+ + L+D+Y
Sbjct: 180 AFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMIS 239
Query: 165 ----CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT-------- 212
C+ + A ++F+ +RD+V WN ++SGY +G MK AR LFD MPY
Sbjct: 240 GYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTM 299
Query: 213 -----------------------TIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPD 248
+ SW +I GY H G + E L F++M + G + P+
Sbjct: 300 LNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPN 359
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+ ++V+VL ACA+LG+L+LG+W+H+Y + NALI+MY KCG I A ++F+
Sbjct: 360 DATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFE 419
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M +D+++W+++I GLA HG A+ LFH+M+ P+ ITFIG+L +C H G E
Sbjct: 420 SMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEE 479
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G YF+SM ++ I +IEHYGC+VDL GRAG LD+A+ ++ MPM+ DA IW +LL +C
Sbjct: 480 GTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGAC 539
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R Y N+++A +A++ L+VLEP++ NYVLLSNIY GRW+DV+R++ L+R KK PG
Sbjct: 540 RIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPG 599
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
CSLIEVN+ V EF S D+ K+I+ +L+ L
Sbjct: 600 CSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGL 632
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/493 (40%), Positives = 303/493 (61%), Gaps = 8/493 (1%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDV---CNSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
+LK+I + + + + K+I + N+ L YA LF ++ + F++N M++
Sbjct: 26 QLKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSSLFYAERLFLCLQNKSTFIWNTMMQ 85
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
A+ + A +LYK ML S LP+ FT FVI++C + +G H V K
Sbjct: 86 AFVEKNEAVRAFSLYKHMLE-----SNYLPNNFTFSFVIRACIDVFNLQMGLCFHGQVVK 140
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
FG +S+ +N L+ LY C + A +F+ RD+V W LISGY GQ+ AR L
Sbjct: 141 FGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQVLIAREL 200
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
FD+MP VSW A+I+GY IG + EAL+VF MQ+ G + SIV L ACA LG+L
Sbjct: 201 FDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAFLGAL 260
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+ G WIH Y ++H+ ++ ALI+MY KCGCI A +FD+M +RDV +++ +I GL
Sbjct: 261 DQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYAFTCLISGL 320
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
ANH K+ AI LF+ MQ V PN++TF+ +L+AC+ G +EGL F+SM + IE +
Sbjct: 321 ANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQ 380
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
I+HYGCLVDLLGRAG++++A ++ EMP++PD+ G+LL +CR + ++++ ++ L+
Sbjct: 381 IQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDSLV 440
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
+ G +VLLSN+YA +WED S++RK + K+++K PGCS IEVN V EFV+GD
Sbjct: 441 QRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSSIEVNGTVCEFVTGD 500
Query: 506 DTKPFLKDIFWLL 518
+ +DI +LL
Sbjct: 501 RSYALEEDIMFLL 513
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/511 (39%), Positives = 314/511 (61%), Gaps = 12/511 (2%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL---AYASL 67
+ LE V IL+ C +L + K++H QI L QS++++TK++ + + + +Y L
Sbjct: 5 RVLEWEVVRILERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRL 64
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
LF Q+ PN F + A+IRAY A++ Y M R R + P FT + +C
Sbjct: 65 LFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSM-RKRR----VSPISFTFSALFSAC 119
Query: 128 AGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
A + +LG Q+HA G S NA++D+Y KC L A VF+EM +RD+++W
Sbjct: 120 AAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISW 179
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
LI Y R+G M+ AR LFD +P +V+WTAM++GY +AL+VFR+++ G+E
Sbjct: 180 TGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVE 239
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNH--LLRRTVICNALIEMYIKCGCINQAS 304
DE+++V V+ ACAQLG+ + WI + + + ++ +ALI+MY KCG + +A
Sbjct: 240 IDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAY 299
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+F M ER+V S+S++I G A HG+A AI LF++M V PN +TF+G+L+AC+H G
Sbjct: 300 DVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAG 359
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
++G F SM++ + + E Y C+ DLL RAG L++AL ++E MPM+ D +WG+L
Sbjct: 360 LVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGAL 419
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L + + N ++A IA + L LEP++ GNY+LLSN YA GRW+DVS++RKL+R K++K
Sbjct: 420 LGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLK 479
Query: 485 KTPGCSLIEVNNE-VQEFVSGDDTKPFLKDI 514
K PG S +E N + +FV+GD + P + +I
Sbjct: 480 KNPGWSWVEAKNGMIHKFVAGDVSHPKINEI 510
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/497 (38%), Positives = 306/497 (61%), Gaps = 6/497 (1%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVF 78
L SC+ L +L +IH Q + + NF+ ++++ + G + YA LF ++++P++F
Sbjct: 42 LSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIF 101
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+ N +IRAY + A+ Y +M S++ PD T P ++K+C+ + LG+
Sbjct: 102 IANTLIRAYAFSPNPIDAVVFYSEMTES----SVVFPDVHTFPLLLKACSEIPSLRLGEA 157
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
IH+HV K G S N L+ +Y C + A VF+ + D +WN +I GY + G
Sbjct: 158 IHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGV 217
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
K AR +F+ MP +VSW+ MI+GY + E L +F+ M IEP+E +V+ L A
Sbjct: 218 FKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSA 277
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA LG++E G+WI Y ++ ++ + ALI+MY KCG + +A ++F +M E++V++W
Sbjct: 278 CAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAW 337
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
S +I GLA +G+ A++LF +M+ V PN++TFIG+L+AC+H+ +EG +F SM
Sbjct: 338 SAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTS 397
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+ ++ H+ C+VDL GRAG LDQA +I+ MP KP++ IWG+LL++CR + + E+
Sbjct: 398 IYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGE 457
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
+ LL L+P G YVLLSNIYA GRW+ V+ +R+++R + + KTPGCS I++ + +
Sbjct: 458 QVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTI 517
Query: 499 QEFVSGDDTKPFLKDIF 515
EFV+GD + P L+ I+
Sbjct: 518 HEFVAGDSSHPQLEMIY 534
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/502 (41%), Positives = 308/502 (61%), Gaps = 14/502 (2%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L C NL L++ +L L Q + L+ + I S G +YA +F P++F
Sbjct: 36 LLCHCTNLSHLQQTQGFMLTRGLDQDDILLARFIYTSASLGLSSYAYSVFISNHRPSIFF 95
Query: 80 YNAMIRAYTNNHLYGLAINLYK--QMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
YN +I A ++++ AI+L+ ++L P PD ++ PFV+K+ L +GK
Sbjct: 96 YNNVIWALSSSN-PTRAISLFNAIRLLGMP-------PDSYSFPFVLKAVVCLSAVHVGK 147
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIH GL SH +L+ +Y C L A K+F+ T + WN +++GYA++G
Sbjct: 148 QIHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKVG 207
Query: 198 QMKKARMLFDKMPYTT--IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
M AR LF+ MP +VSWT +ISGYT S EA+ +FR M + ++PDEI+I++V
Sbjct: 208 NMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAV 267
Query: 256 LPACAQLGSLELGEWIHMYCDK-NHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVER 313
L ACA LG+L+LGEWIH Y +K N+ LR+TV +CN+LI+MY K G I++A QLF M +
Sbjct: 268 LSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHK 327
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+++W+TVI GLA HG +A+ +F M++ +V PN++T I +LSAC+H G G F
Sbjct: 328 TIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIF 387
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM+ + IE KIEHYGC++DLLGRAG L +A+ ++ MP + +A +WGSLLS+ Y +
Sbjct: 388 TSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGD 447
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+A A+ HL VLEP + GNY LLSN YA G W++ + +RK++R +K PG S +E
Sbjct: 448 AALAAEALRHLSVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSFVE 507
Query: 494 VNNEVQEFVSGDDTKPFLKDIF 515
+NN V EF++GD D+
Sbjct: 508 LNNRVYEFIAGDKLNICFLDVL 529
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/507 (39%), Positives = 309/507 (60%), Gaps = 9/507 (1%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F P+L++ + ++ +H ++K+ + ++ + T ++ +GGD A A L + +
Sbjct: 46 FPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERE 105
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA-GLLC 132
++NA+I + +G A + M R + P T V+ +C G
Sbjct: 106 RDTPVVWNALISGHNRCRRFGEACCSFVDMAR-----AGAAPTPVTYVSVLSACGKGTGD 160
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
LG Q+H V G+ ENAL+D+Y +C ++ A K+F+ M R +V+W +L+SG
Sbjct: 161 VLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSG 220
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
RLG++ +AR LF +MP VSWTAMI GY + EAL++FR+MQ + DE ++
Sbjct: 221 LTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTM 280
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
VSV+ ACAQLG+LE+GEW+ +Y + + + NALI+MY KCG I +A +F M
Sbjct: 281 VSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHH 340
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
RD +W+ +I GLA +G +AI +FH M + P+++TFIG+L+AC H G ++G +
Sbjct: 341 RDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREF 400
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F SM+ ++I + HYGC++DL GRAG++ +AL+ I++MPM P++ IWG+LL++CR +
Sbjct: 401 FLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHG 460
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N EI + E LL ++PE++ Y LLSNIYAK RWEDV R+R I K +KK PGCSLI
Sbjct: 461 NSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLI 520
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLE 519
E+N + EFV+GD + P K+I+ LE
Sbjct: 521 EMNGIIHEFVAGDQSHPMSKEIYCKLE 547
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 146/349 (41%), Gaps = 75/349 (21%)
Query: 114 LPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHK 173
+PD +T P ++K+ A + + +HAHV KFG+ ++ +L+ Y + A
Sbjct: 40 MPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARA 99
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
+ E V WN LISG+ R + + EA
Sbjct: 100 LLSERERDTPVVWNALISGHNRCRR-------------------------------FGEA 128
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQ-LGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
F M G P ++ VSVL AC + G + LG +H + +L + NAL++
Sbjct: 129 CCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVD 188
Query: 293 MYIKC-------------------------------GCINQASQLFDQMVERDVVSWSTV 321
MY +C G +++A LF +M ERD VSW+ +
Sbjct: 189 MYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAM 248
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF-----WNEGLMYFDSM 376
I G + +A+ +F EMQ V ++ T + +++ACA G W M +
Sbjct: 249 IDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGI 308
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
K D + + L+D+ + G +++AL++ ++M + D W +++
Sbjct: 309 KMDAFVGNA------LIDMYSKCGSIERALDVFKDMHHR-DKFTWTAII 350
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 110/281 (39%), Gaps = 32/281 (11%)
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
AR L + +P +V+ + +A+ + +M G PD + +L A A+
Sbjct: 8 ARRLLEGIPRRCLVA------------AREDAVAGYARMLARGAMPDAYTFPPLLKAVAR 55
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV-VSWST 320
S +H + K + R + +L+ Y G A L + ERD V W+
Sbjct: 56 GSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSER-ERDTPVVWNA 114
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT------GFWNEGLMYFD 374
+I G + +A F +M R P +T++ +LSAC G G +
Sbjct: 115 LISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGS 174
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+ D +E+ LVD+ ++ A + + M ++ W SLLS +
Sbjct: 175 GVLPDLRVENA------LVDMYAECADMESAWKLFDGMQVRSVVS-WTSLLSGLTRLGRV 227
Query: 435 EIAVIAMEHLLVLEPE-DTGNYVLLSNIYAKHGRWEDVSRM 474
+ A L PE DT ++ + + Y + R+ + M
Sbjct: 228 DEA----RDLFGRMPERDTVSWTAMIDGYVQAARFREALEM 264
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/490 (41%), Positives = 304/490 (62%), Gaps = 8/490 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+ +H +++ + ++ + + ++ +GGD A A L + P +NA+I +
Sbjct: 43 RAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALVGECDTP--VAWNALISGHNRG 100
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA-GLLCPSLGKQIHAHVCKFGLK 149
+G + + M R G+ P T V+ +C G LG Q+H V G+
Sbjct: 101 GRFGESCGSFVDM---ARAGAA--PTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVL 155
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
ENAL+D+Y +C ++ A KVF+ M R +V+W +L+SG ARLGQ+ +AR LFD+M
Sbjct: 156 PDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRM 215
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P VSWTAMI GY + EAL++FR+MQ + DE ++VSV+ ACAQLG+LE+GE
Sbjct: 216 PERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGE 275
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
W+ +Y + + + NALI+MY KCG I +A +F M RD +W+ +I GLA +G
Sbjct: 276 WVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNG 335
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+AI +FH M R+ P+++TFIG+L+AC H G ++G +F SM ++I + HY
Sbjct: 336 YEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHY 395
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
GC++DLLGRAG++ +AL+ I++MPM P++ IWG+LL++CR + N EI + E LL L+P
Sbjct: 396 GCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDP 455
Query: 450 EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
E++ Y+LLSNIYAK RWEDV R+R I K +KK PGCSLIE++ + EFV+GD + P
Sbjct: 456 ENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHP 515
Query: 510 FLKDIFWLLE 519
K+I+ LE
Sbjct: 516 MSKEIYSKLE 525
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 157/385 (40%), Gaps = 114/385 (29%)
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA----GLLCPSLGKQIHAHVCKFGLKSH 151
A+ Y +ML R G PD +T P ++K+ A G + + +HAHV + G+ +
Sbjct: 3 AVAGYARML--ARGGR---PDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRN 57
Query: 152 SITENALL-------------DLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+ ++L+ L G+CD VAWN LISG+ R G+
Sbjct: 58 AHVASSLVAAYTAGGDGAAARALVGECDT---------------PVAWNALISGHNRGGR 102
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ E+ F M G P ++ VSVL A
Sbjct: 103 -------------------------------FGESCGSFVDMARAGAAPTPVTYVSVLSA 131
Query: 259 CAQLGSLE--LGEWIHMYCDKNHLLRRTVICNALIEMYIKC------------------- 297
C + G+ + LG +H + +L + NAL++MY +C
Sbjct: 132 CGK-GTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVV 190
Query: 298 ------------GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
G +++A LFD+M ERD VSW+ +I G + +A+ +F EMQ
Sbjct: 191 SWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSN 250
Query: 346 VPPNDITFIGLLSACAHTGF-----WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
V ++ T + +++ACA G W M +K D + + L+D+ + G
Sbjct: 251 VSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGN------ALIDMYSKCG 304
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLL 425
+++AL++ + M + D W +++
Sbjct: 305 SIERALDVFKGMHHR-DKFTWTAII 328
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/535 (39%), Positives = 321/535 (60%), Gaps = 44/535 (8%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVKEPNVFL 79
+SC + LK+IH ++ + + + ++I + G +AYA LF + EP+ F+
Sbjct: 21 RSCTTIGTLKQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFM 80
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N MIR + AI+LY QM + PDKFT PFV+K+C L +G +
Sbjct: 81 WNTMIRGSAQSPSPLNAISLYSQM-----ENGCVRPDKFTFPFVLKACTRLCWVKMGFGV 135
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCD-------------------------------EL 168
H V + G +S++ N L+ + C EL
Sbjct: 136 HGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGEL 195
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A ++F+EM +D+V+WN +I+GYA+ G+M+ AR LFD++P +V+W AMI+GY G
Sbjct: 196 GVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCG 255
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR--RTVI 286
S +AL++F +M+ VG PDE++++S+L AC LG L+ G+ IH C R ++
Sbjct: 256 SNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHC-CISEMGFRDLSVLL 314
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
NALI+MY KCG I +A ++F M E+DV +W++V+GGLA HG A K+IHLF EM++LK+
Sbjct: 315 GNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKI 374
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
P++ITF+G+L AC+H G EG YFD M+ +++IE I HYGC+VDLLGRAG L++A
Sbjct: 375 RPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAF 434
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
+ I+ M ++P+A +W +LL +CR + N+E+ A LL + +++G+YVLLSNIYA G
Sbjct: 435 DFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRG 494
Query: 467 RWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE-VQEFVSGDDTKPFLKDIFWLLEL 520
W+ V ++RKL+ ++K GCSLIE +N+ + F+ D+KP L LEL
Sbjct: 495 EWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFLF--DSKPKLNSRKPFLEL 547
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/518 (40%), Positives = 309/518 (59%), Gaps = 17/518 (3%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLF 69
LE + V L C+NL ++K++H +IL L QS +++ K+I N D Y +F
Sbjct: 45 LESQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVD-PYPLSIF 103
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
QV PN FLYNA+IR Y + Y M ++ ++P FT + K+C
Sbjct: 104 NQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEG-----VVPVSFTFTALFKACGA 158
Query: 130 LLCPSLGKQIHAH---VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
+ LG+QIH V FG H N+++D+Y KC L KVF+EM +RD+++W
Sbjct: 159 KMDVGLGRQIHGQTILVGGFGEDLH--VGNSMIDMYIKCGFLECGRKVFDEMPNRDVISW 216
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
LIS Y + G M+ A LFD +P +V+WT M+SG+ EA+ F +MQ G+E
Sbjct: 217 TELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVE 276
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR--TVICNALIEMYIKCGCINQAS 304
DEI+++ V+ ACAQLG+ + +WI +K+ + V+ +ALI+MY KCG + A
Sbjct: 277 TDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAY 336
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++F M ER+V S+S++I G A HG+ H A+ LF EM + ++ PN +TFIG+L+AC+H G
Sbjct: 337 RVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAG 396
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+G F+ M++ + I+ +HY C+VDLLGRAGRL +A +++ MP++P +WG+L
Sbjct: 397 MVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGAL 456
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L +CR + + +IA IA HL LEP GNY+LL+NIYA GRW DVS +RKL+R++ ++
Sbjct: 457 LGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLR 516
Query: 485 KTPGCSLIEVNNE-VQEFVSGDDTKPFLKDIFWLLELL 521
K P S IE V EF SGD T P +I LE L
Sbjct: 517 KNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDL 554
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/529 (38%), Positives = 308/529 (58%), Gaps = 42/529 (7%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
LKK+HT I Q+ L K++ + G+ +F ++ + NV YN MIR+Y N
Sbjct: 37 LKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVN 96
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
NH Y + ++++M+ PD +T P V+K+C+ G IH V K GL
Sbjct: 97 NHRYDDGLLVFREMVNGG-----FRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLD 151
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR-------------- 195
+ N L+ +YGKC L EA +VF+EM +D+V+WN++++GYA
Sbjct: 152 FNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREM 211
Query: 196 --LGQMKKARMLFDKMPYTT---------------------IVSWTAMISGYTHIGSYAE 232
GQ + MP ++SW MI Y +
Sbjct: 212 EDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQ 271
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
A+D++ QM+ +EPD I+ SVLPAC L +L LG IH Y +K L ++ N+LI+
Sbjct: 272 AVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLID 331
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
MY +CGC++ A ++FD+M RDV SW+++I G+ A+ LF EM P+ I
Sbjct: 332 MYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIA 391
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
F+ +LSAC+H+G +EG +YF M D+ I +IEHY CLVDLLGRAGR+D+A NII++M
Sbjct: 392 FVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQM 451
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVS 472
P++P+ ++W +LLSSCR ++N++I ++A ++LL L PE +G YVLLSNIYAK GRW++V+
Sbjct: 452 PIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVT 511
Query: 473 RMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+R +++ K ++KTPG S +E+NN+V F++GD + P K+I+ L +L
Sbjct: 512 EIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVL 560
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/527 (38%), Positives = 318/527 (60%), Gaps = 40/527 (7%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
E F+P++ + L +L +IH QI + L ++ +VT++I S L YA +F+
Sbjct: 40 ETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFD 99
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
PN+F++NA+IR N + +++ + MLR I PD+ TLPFV+KS A L+
Sbjct: 100 HPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLS-----IRPDRLTLPFVLKSVAALVDV 154
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL------------------------- 168
LG+ +H V K GL+ S +L+D+Y K EL
Sbjct: 155 GLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVL 214
Query: 169 ----------IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWT 218
+A +FE M +R+ +WN+LI+G+ R G + +AR LF +MP +VSWT
Sbjct: 215 INGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWT 274
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
MI+G++ G + +AL +F +M G+ P+++++VS L AC ++G+L++GE IH Y N
Sbjct: 275 TMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSN 334
Query: 279 HLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLF 338
I AL++MY KCG I AS++F + +D+++WS +I G A HG +A+ F
Sbjct: 335 GFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCF 394
Query: 339 HEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
+M+ + P+++ F+ +L+AC+H+G ++GL +F+SM+ D+ IE ++HY +VDLLGR
Sbjct: 395 VKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGR 454
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLL 458
AGRLD+AL+ I+ MP+ PD IWG+L +CR + N+E+A + E LL LEP+ G+YV L
Sbjct: 455 AGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFL 514
Query: 459 SNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
SN+YA GRWEDV R+R L++++ ++K PG S IEV +V FV+GD
Sbjct: 515 SNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGD 561
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/521 (37%), Positives = 319/521 (61%), Gaps = 8/521 (1%)
Query: 5 IGALSIKELE-DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS--GGD 61
+G L + +L ++ + +L+ C N+ ELK+IH Q+LK + V++++ S +
Sbjct: 1 MGTLQLLQLNVEQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSN 60
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
L YA ++F ++ PN ++N MIRAY+N++ A+ LY QML I + +T P
Sbjct: 61 LTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHS-----IPHNAYTFP 115
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
F++K+C+ L + QIH + K G S N+LL +Y + AH +F+ + R
Sbjct: 116 FLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSR 175
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
DIV+WN +I GY + G ++ A +F MP ++SWT+MI G+ G + EAL + +QM
Sbjct: 176 DIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQML 235
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
+ GI+PD+I++ L ACA LG+LE G+WIH Y KN + V+ ALI+MY+KCG +
Sbjct: 236 VAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMK 295
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+A +F ++ ++ V +W+ +IGG A HGK +A+ F +MQ+ + P TF +L+AC+
Sbjct: 296 KALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACS 355
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
HTG EG F+SM ++++ +EHYGC+VDLLGRAG L +A +E MP+KP+A IW
Sbjct: 356 HTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIW 415
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
GSLL++C + +LE+ + L+ L+PE G Y+ L++I+A G W++ S++R I++K
Sbjct: 416 GSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNK 475
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+ PGCS I +N EF +G + P +++++ + L+A
Sbjct: 476 GLLNLPGCSTITLNGVAHEFFAGAEPHPHVREMYDMSNLIA 516
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/572 (36%), Positives = 321/572 (56%), Gaps = 68/572 (11%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
LE+RF+ +LQSC+ ++ +I QI+ + ++ K++ +C + + YA LF Q+
Sbjct: 37 LEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQI 96
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL------------ 120
+PN+ L+N+M R Y + Y + L+ QM G I P+ FT
Sbjct: 97 PDPNIALWNSMFRGYAQSESYREVVFLFFQM-----KGMDIRPNCFTFPVVLKSCGKINA 151
Query: 121 -------------------PFV------IKSCAG-------LLCPSLGKQIHA---HVCK 145
PFV + S G + C + + A +
Sbjct: 152 LIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMING 211
Query: 146 FGLKSHSITENALLDL---------------YGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
+ L + ++ L DL Y + +++EA K+F EM +RD++ WN ++
Sbjct: 212 YILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVL 271
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDE 249
GYA G ++ LF++MP I SW A+I GY H G + E L F++M + P++
Sbjct: 272 KGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPND 331
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++V+VL ACA+LG+L+LG+W+H+Y + + L + NAL++MY KCG I A +F
Sbjct: 332 ATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRG 391
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M +D++SW+T+IGGLA H + A++LF +M+ P+ ITFIG+L AC H G +G
Sbjct: 392 MDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDG 451
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF SM D+ I +IEHYGC+VD+L RAGRL+QA+ + +MP++ D IW LL +CR
Sbjct: 452 FAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACR 511
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
Y N+E+A +A++ L+ LEP++ NYV+LSNIY GRWEDV+R++ +R KK PGC
Sbjct: 512 IYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGC 571
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
SLIEVN+ V EF S D+ P +++I+ +L L
Sbjct: 572 SLIEVNDAVVEFYSLDERHPQIEEIYGVLRGL 603
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/606 (34%), Positives = 330/606 (54%), Gaps = 88/606 (14%)
Query: 1 MAARIGALSIKE--------LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKM 52
M +IG L++ + +ED+F+ +L++C + L +I QI+ + L ++++
Sbjct: 1 MQTKIGKLAVNQTSKPLHRVVEDKFISLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSF 60
Query: 53 IDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL 112
I C G + A +F + +PN +NAM R Y + + + L+ +M R +
Sbjct: 61 ITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGAS--- 117
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG--------- 163
P+ FT P V+KSCA G+++H V K G KS++ AL+ +Y
Sbjct: 118 --PNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVAD 175
Query: 164 ------------------------KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
C +++ A ++F+ RD+V WN ++SGY LG M
Sbjct: 176 AYKVFAEMRDKNVFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDM 235
Query: 200 KKARMLFDKMP-------------YTT------------------IVSWTAMISGYTHIG 228
AR LFD+MP Y T + SW +I GY G
Sbjct: 236 VAARELFDRMPDRDVMSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNG 295
Query: 229 SYAEALDVFRQMQMV----GIE-------PDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
+ EAL+ F++M ++ G E P++ ++V+VL AC++LG LE+G+W+H+Y +
Sbjct: 296 LFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAES 355
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ NALI+MY KCG I +A +FD + +D+++W+T+I GLA HG A+ L
Sbjct: 356 IGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALSL 415
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F M+R P+ +TF+G+LSAC H G GL++F SM D+ I +IEHYGC+VDLLG
Sbjct: 416 FERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLG 475
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
RAG +D+A++I+ +MPM+PDA IW +LL +CR Y N+E+A +A++ L+ LEP + GN+V+
Sbjct: 476 RAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVEMAELALQRLIELEPNNPGNFVM 535
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWL 517
+SNIY GR +DV+R++ +R +K PGCS+I N+ + EF S D+ P I+
Sbjct: 536 VSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSMVEFYSLDERHPETDSIYRA 595
Query: 518 LELLAL 523
L+ L +
Sbjct: 596 LQGLTI 601
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 314/505 (62%), Gaps = 9/505 (1%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDV--CNSGGDLAYASLLFKQVK 73
R + +L+ C + ++K++H+ ++ F K+I + +S D+++A LF +
Sbjct: 12 RCLSLLEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLP 71
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
F++N +IR + + A++LYK ML+ TG LP+ +T FV+++C
Sbjct: 72 HRTTFIWNTIIRIFVEKNENATALSLYKNMLQ---TG--FLPNNYTFSFVLRACTD--NS 124
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+G HA V K G +S+ N L+ LY + A K+F+ T RD++ W LI+GY
Sbjct: 125 PVGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGY 184
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G ++ AR LFD+MP VSW+AMI+GY H+G + EAL++F +Q+ G+ P+ IV
Sbjct: 185 VKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIV 244
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
L AC+ LGSL+ G WIH Y D+N V+ AL++MY KCGCI A +F++M ++
Sbjct: 245 GALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDK 304
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +++++I GLANHG++ AI LF MQ KV PN++TFI +LSAC+ G +EGL F
Sbjct: 305 DAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIF 364
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ M + IE ++HYGC+VDLLGRAG L++A ++ EMPM+PD+ + G+LL+SCR + +
Sbjct: 365 NCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGD 424
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+ +E L+ + G +VLLSN+YA +W+ V ++RK + +K +KK PGCS IE
Sbjct: 425 VELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPGCSSIE 484
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLL 518
++ V EF++GD + ++D+ +L
Sbjct: 485 IDGSVSEFIAGDMSYLRVEDVMLVL 509
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 321/522 (61%), Gaps = 17/522 (3%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
++ L+ F +LQ+C+ + +LK+IHTQI+ SQ NFL+ K++ + G+L A +
Sbjct: 13 GLRALQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKV 72
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F++++ P+ ++N MIR ++ + + LY +M+ P++FT F+I CA
Sbjct: 73 FERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAE-----PNEFTYSFLIGGCA 127
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY---GKCDELIEAHKVFEEMTDRDIVA 185
G+Q+H V G ++ +L++LY G D + +A +VF+E+ DR+IV+
Sbjct: 128 RSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVS 187
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
WN+L++GY R G + AR +FD+MP +VSWT MI+G IG +AL +F +M+ G+
Sbjct: 188 WNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGV 247
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKN-HLLRRTVIC---NALIEMYIKCGCIN 301
+ D++++V+ L ACA+LG L+LG WIH Y D+ H + ++ N+LI MY CG I+
Sbjct: 248 KLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVID 307
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP---PNDITFIGLLS 358
+A ++F M +R +SW+++I G A G A +A+ +F MQRL P+ ITFIG+L
Sbjct: 308 KAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLC 367
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H GF ++G +F+ M + I +IEHYGC+VDLL RAG LD+A +IE MPMKP+
Sbjct: 368 ACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPND 427
Query: 419 KIWGSLLSSCRTYSNLEIAV-IAMEHLLVLEPEDTGNY-VLLSNIYAKHGRWEDVSRMRK 476
+WG+LL CR + N E+A +A + L L+P+ Y VLLSN+YA RW+DV+ +R+
Sbjct: 428 AVWGALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQ 487
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+ ++K G S +++N V +FV+GD T ++ +L
Sbjct: 488 KMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEML 529
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/443 (41%), Positives = 288/443 (65%), Gaps = 5/443 (1%)
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +N M+ Y + + L+ +M + + P+ TL ++ +C+ L G
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRG-----VSPNSVTLVLMLSACSKLKDLEGG 227
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K I+ ++ ++ + I EN L+D++ C E+ EA VF+ M +RD+++W ++++G+A +
Sbjct: 228 KHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANI 287
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
GQ+ AR FD++P VSWTAMI GY + + EAL +FR+MQM ++PDE ++VS+L
Sbjct: 288 GQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSIL 347
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA LG+LELGEW+ Y DKN + T + NALI+MY KCG + +A ++F +M +D
Sbjct: 348 TACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKF 407
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+ +I GLA +G +A+ +F M + P++IT+IG+L AC H G +G +F SM
Sbjct: 408 TWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISM 467
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
H I+ + HYGC+VDLLGRAGRL++A +I MP+KP++ +WGSLL +CR + N+++
Sbjct: 468 TMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQL 527
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A +A + +L LEPE+ YVLL NIYA RWE++ ++RKL+ + +KKTPGCSL+E+N
Sbjct: 528 AEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNG 587
Query: 497 EVQEFVSGDDTKPFLKDIFWLLE 519
V EFV+GD + P K+I+ LE
Sbjct: 588 NVYEFVAGDQSHPQSKEIYAKLE 610
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 216/446 (48%), Gaps = 81/446 (18%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +L+ C+++ +LK+IH+ +K LS ++I C + G + YA +F + +P
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQP 70
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+F++N MI+ Y+ + +++Y ML S I PD+FT PF++K +
Sbjct: 71 TLFIWNTMIKGYSRINHPQNGVSMYLLML-----ASNIKPDRFTFPFLLKGFTRNMALQY 125
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
GK + H K G S+ + A + ++ C + A KVF+ ++V WN ++SGY R
Sbjct: 126 GKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNR 185
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
+ Q KK++MLF +M+ G+ P+ +++V +
Sbjct: 186 VKQFKKSKMLFI-------------------------------EMEKRGVSPNSVTLVLM 214
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L AC++L LE G+ I+ Y + + R ++ N LI+M+ CG +++A +FD M RDV
Sbjct: 215 LSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDV 274
Query: 316 VSWSTVIGGLANHGK---AHK----------------------------AIHLFHEMQRL 344
+SW++++ G AN G+ A K A+ LF EMQ
Sbjct: 275 ISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMS 334
Query: 345 KVPPNDITFIGLLSACAHTGF-----WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
V P++ T + +L+ACAH G W + + +S+K D + + L+D+ +
Sbjct: 335 NVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGN------ALIDMYFKC 388
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLL 425
G + +A + +EM K D W +++
Sbjct: 389 GNVGKAKKVFKEMHHK-DKFTWTAMI 413
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 130/301 (43%), Gaps = 31/301 (10%)
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
KQIH+H K GL S + + ++ AH+
Sbjct: 24 KQIHSHTIKMGLSSDPLFQKRVI-------AFCCAHES---------------------- 54
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G+M AR +FD +P T+ W MI GY+ I + ++ M I+PD + +L
Sbjct: 55 GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLL 114
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
+ +L+ G+ + + K+ + A I M+ C ++ A ++FD +VV
Sbjct: 115 KGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVV 174
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+ ++ G + K+ LF EM++ V PN +T + +LSAC+ EG +
Sbjct: 175 TWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDL-EGGKHIYKY 233
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+E + L+D+ G +D+A ++ + M + D W S+++ +++
Sbjct: 234 INGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNR-DVISWTSIVTGFANIGQIDL 292
Query: 437 A 437
A
Sbjct: 293 A 293
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 9 SIKELEDRFVPILQSCENL--IELKK-IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
++K E V IL +C +L +EL + + T I K + F+ +ID+ G++ A
Sbjct: 335 NVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKA 394
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+FK++ + F + AMI N A+ ++ M+ + I PD+ T V+
Sbjct: 395 KKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIE-----ASITPDEITYIGVLC 449
Query: 126 SCAGLLCPSLGKQIH-AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR-DI 183
+C G+ + + G+K + ++DL G+ L EAH+V M + +
Sbjct: 450 ACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNS 509
Query: 184 VAWNNLISG 192
+ W +L+
Sbjct: 510 IVWGSLLGA 518
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/574 (36%), Positives = 321/574 (55%), Gaps = 68/574 (11%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
+E++F+ +L+SC+N L +I QI+ + L ++F+ I C+ + +A LF ++
Sbjct: 11 VEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKI 70
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+PN +NAM R Y N + + L+ ++ R +P+ FT P +IKSC L
Sbjct: 71 PQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAG-----MPNCFTFPMIIKSCGKLEG 125
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-------------- 178
G+++H K G KS+S +L+D+Y K + +A+KVF EM
Sbjct: 126 VREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIING 185
Query: 179 -----------------TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM- 220
+RD+V W+ LISGY M AR LFDKMP +SW AM
Sbjct: 186 YILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAML 245
Query: 221 ------------------------------ISGYTHIGSYAEALDVFRQMQMVG-IEPDE 249
I GY G ++E L+ F++M + G + P++
Sbjct: 246 NGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPND 305
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++V+VL AC++LG+L++G+W+H+Y + + N LI+MY KCG I A +F+
Sbjct: 306 FTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNC 365
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
+ +D++SW+T+I GLA HG A A+ +F M+ P+ +TF+G+LSAC H G +G
Sbjct: 366 LDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDG 425
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
+YF SM + I +IEHYGC+VDLLGRAG LDQALN I +MP++PDA IW +LL +CR
Sbjct: 426 FLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACR 485
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
Y N+EIA +A++ L+ LEP + N+V++SNIY GR EDV+R++ +R +K PGC
Sbjct: 486 LYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGC 545
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
S+IE N+ V EF S D+ + I+ +L+ L +
Sbjct: 546 SVIECNDSVVEFYSLDERHSETESIYRVLKGLTM 579
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/517 (38%), Positives = 326/517 (63%), Gaps = 16/517 (3%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+K+ I+K + N++ +ID+ ++ A LF ++ + +N MI Y
Sbjct: 217 EKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRC 276
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK-FGLK 149
+ AIN +++M ++ PD+ T+ + +C L LG +IH +V K G
Sbjct: 277 RRFEDAINTFREMQQEGNEK----PDEATVVSTLSACTALKNLELGDEIHNYVRKELGFT 332
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+ +NALLD+Y KC L A +F+EM+ ++++ W ++ISGY G +++AR LFDK
Sbjct: 333 TR--IDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKS 390
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P +V WTAMI+GY + +A+ +FR+MQ+ I+PD+ ++V++L CAQLG+LE G+
Sbjct: 391 PVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGK 450
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
WIH Y D+N + V+ ALIEMY KCGC++++ ++F ++ ++D SW+++I GLA +G
Sbjct: 451 WIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNG 510
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
K +A+ LF EM+R+ P+DITFIG+LSAC+H G EG +F+SMK+ H IE K+EHY
Sbjct: 511 KTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHY 570
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKP---DAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
GC++DLLGRAG LD+A +I+E+P++ ++G+LLS+CR ++N+++ + L
Sbjct: 571 GCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLEN 630
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
+E D+ + LL+NIYA RWED ++R+ ++ +KK PGCSLIEV+ V EF+ GD
Sbjct: 631 IESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDP 690
Query: 507 TKPFLKDIFWLL-----ELLALHQDRAKDVIDIMYED 538
+ P + +I +L +LL L + + + V+ +Y+D
Sbjct: 691 SHPEMIEICSMLNRVTGQLLGLKESQVESVMP-LYKD 726
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 219/442 (49%), Gaps = 73/442 (16%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ L++C+++ +LK+I +QI + L + K++ C +S G+L YA +F V++P
Sbjct: 101 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 160
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
++F+YN M++ Y + + L++Q+ D + PD FT PFV+K+ L
Sbjct: 161 SLFVYNVMVKIYAKRGILRKVLLLFQQLREDG-----LWPDGFTYPFVLKAIGCLRDVRQ 215
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+++ + K G+ + N+L+D+Y + + A K+F+EMT RD V+WN +ISGY R
Sbjct: 216 GEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVR 275
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVS 254
+ + +A++ FR+MQ G E PDE ++VS
Sbjct: 276 CRR-------------------------------FEDAINTFREMQQEGNEKPDEATVVS 304
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
L AC L +LELG+ IH Y K L T I NAL++MY KCGC+N A +FD+M ++
Sbjct: 305 TLSACTALKNLELGDEIHNYVRK-ELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKN 363
Query: 315 VVSWSTVIGGLANHGKAHK-------------------------------AIHLFHEMQR 343
V+ W+++I G N G + A+ LF EMQ
Sbjct: 364 VICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQI 423
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
K+ P+ T + LL+ CA G +G + ++ I + L+++ + G +D
Sbjct: 424 QKIKPDKFTVVTLLTGCAQLGALEQG-KWIHGYLDENRITMDVVVGTALIEMYSKCGCVD 482
Query: 404 QALNIIEEMPMKPDAKIWGSLL 425
++L I E+ K D W S++
Sbjct: 483 KSLEIFYELEDK-DTASWTSII 503
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
DRD + + LG ++ A +F+ + ++ + M+ Y G + L +F+Q
Sbjct: 128 DRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQ 187
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
++ G+ PD + VL A L + GE + + K + + N+LI+MY +
Sbjct: 188 LREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSN 247
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLS 358
+ A +LFD+M RD VSW+ +I G + AI+ F EMQ+ P++ T + LS
Sbjct: 248 VENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLS 307
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC G + ++++ +I++ L+D+ + G L+ A NI +EM MK +
Sbjct: 308 ACTALKNLELGDEIHNYVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NV 364
Query: 419 KIWGSLLS 426
W S++S
Sbjct: 365 ICWTSMIS 372
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/517 (38%), Positives = 326/517 (63%), Gaps = 16/517 (3%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+K+ I+K + N++ +ID+ ++ A LF ++ + +N MI Y
Sbjct: 263 EKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRC 322
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK-FGLK 149
+ AIN +++M ++ PD+ T+ + +C L LG +IH +V K G
Sbjct: 323 RRFEDAINTFREMQQEGNEK----PDEATVVSTLSACTALKNLELGDEIHNYVRKELGFT 378
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+ +NALLD+Y KC L A +F+EM+ ++++ W ++ISGY G +++AR LFDK
Sbjct: 379 TR--IDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKS 436
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P +V WTAMI+GY + +A+ +FR+MQ+ ++PD+ ++V++L CAQLG+LE G+
Sbjct: 437 PVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGK 496
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
WIH Y D+N + V+ ALIEMY KCGC++++ ++F ++ ++D SW+++I GLA +G
Sbjct: 497 WIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNG 556
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
K +A+ LF EM+R+ P+DITFIG+LSAC+H G EG +F+SMK+ H IE K+EHY
Sbjct: 557 KTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHY 616
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKP---DAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
GC++DLLGRAG LD+A +I+E+P++ ++G+LLS+CR ++N+++ + L
Sbjct: 617 GCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLEN 676
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
+E D+ + LL+NIYA RWED ++R+ ++ +KK PGCSLIEV+ V EF+ GD
Sbjct: 677 IESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDP 736
Query: 507 TKPFLKDIFWLL-----ELLALHQDRAKDVIDIMYED 538
+ P + +I +L +LL L + + + V+ +Y+D
Sbjct: 737 SHPEMMEICSMLNRVTGQLLGLKESQVESVMP-LYKD 772
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 224/456 (49%), Gaps = 77/456 (16%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGD 61
RI L+ K + L++C+++ +LK+I +QI + L + K++ C +S G+
Sbjct: 137 RISKLTKKSC----IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGN 192
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
L YA +F V++P++F+YN M++ Y + + L++Q+ D + PD FT P
Sbjct: 193 LRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDG-----LWPDGFTYP 247
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
FV+K+ L G+++ + K G+ + N+L+D+Y + + A K+F+EMT R
Sbjct: 248 FVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTR 307
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
D V+WN +ISGY R + + +A++ FR+MQ
Sbjct: 308 DSVSWNVMISGYVRCRR-------------------------------FEDAINTFREMQ 336
Query: 242 MVGIE-PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
G E PDE ++VS L AC L +LELG+ IH Y K L T I NAL++MY KCGC+
Sbjct: 337 QEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-ELGFTTRIDNALLDMYAKCGCL 395
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHK--------------------------- 333
N A +FD+M ++V+ W+++I G N G +
Sbjct: 396 NIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFH 455
Query: 334 ----AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
A+ LF EMQ +V P+ T + LL+ CA G +G + ++ I +
Sbjct: 456 HFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQG-KWIHGYLDENRITMDVVVG 514
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
L+++ + G +D++L I E+ K D W S++
Sbjct: 515 TALIEMYSKCGCVDKSLEIFYELEDK-DTASWTSII 549
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 10/292 (3%)
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM------TDRDIVAWNNLISGYAR 195
H+ L+ +T+ + ++ C + + ++ ++ DRD + +
Sbjct: 130 HLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSS 189
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
LG ++ A +F+ + ++ + M+ Y G + L +F+Q++ G+ PD + V
Sbjct: 190 LGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFV 249
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L A L + GE + + K + + N+LI+MY + + A +LFD+M RD
Sbjct: 250 LKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDS 309
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VSW+ +I G + AI+ F EMQ+ P++ T + LSAC G +
Sbjct: 310 VSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHN 369
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
++++ +I++ L+D+ + G L+ A NI +EM MK + W S++S
Sbjct: 370 YVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMIS 418
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/506 (39%), Positives = 308/506 (60%), Gaps = 11/506 (2%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
LK+I L+ + + L+ ++ + + + YA LF + +P VFLYN +I+AY++
Sbjct: 4 LKQIQAYTLRNGIEHTKQLIVSLLQIPS----IPYAHKLFDFIPKPTVFLYNKLIQAYSS 59
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
+ + +LY QM + P++ + F+ +CA L G+ +H H K G
Sbjct: 60 HGPHHQCFSLYTQMCLQGCS-----PNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFG 114
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
AL+D+Y K L A K F+EMT RD+ WN++I+GYAR G ++ A LF M
Sbjct: 115 CDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLM 174
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEISIVSVLPACAQLGSLELG 268
P + SWTAMISGY G YA+AL +F M+ + P+E+++ SVLPACA LG+LE+G
Sbjct: 175 PARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVG 234
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLAN 327
E I +Y N + + NAL+EMY +CG I++A +F+++ R++ SW+++I GLA
Sbjct: 235 ERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAV 294
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
HG+ +AI LF++M R P+D+TF+G+L AC H G EG +F+SM+RD I K+E
Sbjct: 295 HGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLE 354
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
HYGC+VDLLGRAG L +A ++I MPM+PD+ +WG+LL +C + ++E+A A L L
Sbjct: 355 HYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFEL 414
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
EP + GNYV+LSNIYA GRW+ V+R+RKL++ + K G S IE + +F+ D +
Sbjct: 415 EPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRS 474
Query: 508 KPFLKDIFWLLELLALHQDRAKDVID 533
+I+ LL+ +++ +V D
Sbjct: 475 HSRSDEIYALLDEVSMKMKLHGNVND 500
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/486 (40%), Positives = 313/486 (64%), Gaps = 12/486 (2%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+E E R + L + +L +IH IL++ L QSN +++ I VC + + YA+L+F
Sbjct: 6 REAERRILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFH 65
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAIN---LYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
Q + PN+ L+N+MI+ Y+ L G + N L+ QM I PD+FT ++KSC
Sbjct: 66 QTQNPNLLLFNSMIKGYS---LCGPSENSLLLFSQM-----KNRGIWPDEFTFAPLLKSC 117
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+G+ +GK +H V G + S ++DLY C + +A KVF+EM DRD++ WN
Sbjct: 118 SGICDNRIGKGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWN 177
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+I G+ ++G ++ LF +M ++VSW +MI+G G EAL++FR+M G EP
Sbjct: 178 MMIRGFCKVGDIEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEP 237
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQL 306
D+ ++V++LP CA+LG++++GEWIH Y + + LLR + + N+L++ Y KCG + A ++
Sbjct: 238 DDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRV 297
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F++M +++VVSW+ +I GL +GK LF EM V PND TF+G+LS CAH G
Sbjct: 298 FNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLV 357
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
G F SM DH +E K+EH+GC+VDLL R G +++A +++ MPM+P+A +WGSLLS
Sbjct: 358 ERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLS 417
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+ RT +++ A A++ L+ LEP ++GNYVLLSN+YA+ G+W++V ++R L++ K+++K
Sbjct: 418 AYRTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKN 477
Query: 487 PGCSLI 492
PG S++
Sbjct: 478 PGQSMV 483
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/480 (40%), Positives = 314/480 (65%), Gaps = 6/480 (1%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
E+E R + +L ++ L +IH L++ L QSN ++ I VC S +AYA LF Q
Sbjct: 7 EIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQ 66
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
PN+FL+N++I+A++ + + ++ L+ M ++ R I+PD++T ++KSCA L
Sbjct: 67 SHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSM-KNHR----IVPDQYTFAPLLKSCANLC 121
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
SLG+ + + V + G +++LY C+++ +A K+F+EM+ RD+V WN +I
Sbjct: 122 EYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIR 181
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G+ + G + LF +M ++VSW +IS EAL++F+QM+ G +PDE++
Sbjct: 182 GFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVT 241
Query: 252 IVSVLPACAQLGSLELGEWIHMYCD-KNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+V++LP C++LG+LE+G+ IH Y K +L+ T + N+LI+ Y KCG I +A +F +M
Sbjct: 242 VVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKM 301
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+ VVSW+T+I G A +GK AI LF EM++ + PND TF+ +L+AC H+G +G
Sbjct: 302 TCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGR 361
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
F SM D+ I+ K+EH+GC+VDLLGR G +++A +I+ MPM+P+A +WG++L +CRT
Sbjct: 362 ELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRT 421
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ NL++A +A++ L+ LEP ++GNYVLLSN+ A+ GRWE+V +R+ +R KS+KK PG S
Sbjct: 422 HGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 481
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/495 (40%), Positives = 299/495 (60%), Gaps = 49/495 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G +AYA LF + EP+ F++N MIR + AI+LY QM + PDKFT
Sbjct: 26 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQM-----ENGCVRPDKFT 80
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD------------- 166
PFV+K+C L +G +H V + G +S++ N L+ + C
Sbjct: 81 FPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSA 140
Query: 167 ------------------ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
EL A ++F+EM +D+V+WN +I+GYA+ G+M+ AR LFD+
Sbjct: 141 KRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDE 200
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+P +V+W AMI+GY GS +AL++F +M+ VG PDE++++S+L AC LG L+ G
Sbjct: 201 VPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAG 260
Query: 269 EWIHMYCDKNHLLR--RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
+ IH C R ++ NALI+MY KCG I +A ++F M E+DV +W++V+GGLA
Sbjct: 261 QRIHC-CISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLA 319
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
HG A K+IHLF EM++LK+ P++ITF+G+L AC+H G EG YFD M+ +++IE I
Sbjct: 320 FHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNI 379
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
HYGC+VDLLGRAG L++A + I+ M ++P+A +W +LL +CR + N+E+ A LL
Sbjct: 380 RHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLK 439
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV-------- 498
+ +++G+YVLLSNIYA G W+ V ++RKL+ ++K GCSLIE +N+
Sbjct: 440 MRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFLFDS 499
Query: 499 --QEFVSGDDTKPFL 511
F+ G+D F+
Sbjct: 500 KPNLFIEGNDDTSFV 514
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 108/250 (43%), Gaps = 16/250 (6%)
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
S A G M A LF + W MI G S A+ ++ QM+ + PD+
Sbjct: 20 SSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKF 79
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ VL AC +L +++G +H + T + N LI + CG + A LFD
Sbjct: 80 TFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGS 139
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND-ITFIGLLSACAHTGFWNEG 369
+RDVV+WS + G A G+ A LF EM P D +++ +++ A G
Sbjct: 140 AKRDVVAWSALTAGYARRGELGVARQLFDEM-----PVKDLVSWNVMITGYAKRGEMESA 194
Query: 370 LMYFDSM-KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK---PDAKIWGSLL 425
FD + KRD + + ++ G QAL + EEM PD SLL
Sbjct: 195 RKLFDEVPKRD------VVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLL 248
Query: 426 SSCRTYSNLE 435
S+C +L+
Sbjct: 249 SACTDLGDLD 258
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/495 (39%), Positives = 313/495 (63%), Gaps = 8/495 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+K+ + K L ++ +ID+ +LF ++ + +V +N MI Y
Sbjct: 157 EKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKC 216
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ AIN++ +M + S ++PD+ T+ + +C L LGK+IH H + +K
Sbjct: 217 RRFEDAINVFCRMQEE----SGLMPDEATVVSTLSACTALKRLELGKKIH-HYVRDNVKF 271
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
I NALLD+Y KC L A VFEEM ++++ W ++SGYA G++++AR LF+ P
Sbjct: 272 TPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSP 331
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+V WTAMI+GY + EA+ +FR+MQ+ ++PD+ +VS+L CAQ G++E G+W
Sbjct: 332 IRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKW 391
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
IH + D+N + V+ ALIEMY KCG I +A ++F + +D SW+++I GLA +GK
Sbjct: 392 IHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGK 451
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
KA+ LF +M++ V P+DITFIG+LSAC+H G EG +F+SM+ ++ I+ K+EHYG
Sbjct: 452 TSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYG 511
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDA---KIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
CLVDLLGRAG L++A +I+++P + A ++GSLLS+CR Y N+E+ + L+
Sbjct: 512 CLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKF 571
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
E D+ + LL+NIYA RWEDV+++R+ ++ +KKTPGCS IEV++ + EF SG +
Sbjct: 572 ESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPS 631
Query: 508 KPFLKDIFWLLELLA 522
P +++I+++L ++A
Sbjct: 632 HPEMREIYYMLNIMA 646
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 215/442 (48%), Gaps = 73/442 (16%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS--GGDLAYASLLFKQVKEP 75
+ L+SC+++ LK+IH QI + L Q + K++ C G+L YA +FK ++ P
Sbjct: 41 ISYLKSCKSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYP 100
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+ +YN +I+A+ Y + L+ ++ D + PD FT PFV K+ L S
Sbjct: 101 CLLIYNLIIKAFAKKGNYKRTLVLFSKLREDG-----LWPDNFTYPFVFKAIGYLGEVSK 155
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
+++ V K GL+ + N+L+D+Y + +F+EM DRD+++WN +ISGY +
Sbjct: 156 AEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVK 215
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEPDEISIVS 254
+ + +A++VF +MQ G+ PDE ++VS
Sbjct: 216 CRR-------------------------------FEDAINVFCRMQEESGLMPDEATVVS 244
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
L AC L LELG+ IH Y ++++ +I NAL++MY KCGC++ A +F++M ++
Sbjct: 245 TLSACTALKRLELGKKIHHYV-RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKN 303
Query: 315 VVSWSTVIGGLANHG-------------------------------KAHKAIHLFHEMQR 343
V+ W+T++ G AN G + +A+ LF EMQ
Sbjct: 304 VICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQI 363
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
KV P+ + LL+ CA TG +G + ++ I L+++ + G ++
Sbjct: 364 RKVKPDKFIVVSLLTGCAQTGAIEQG-KWIHEFIDENRIPIDAVVGTALIEMYAKCGFIE 422
Query: 404 QALNIIEEMPMKPDAKIWGSLL 425
+AL I + +K D W S++
Sbjct: 423 KALEIFYGLRVK-DTASWTSII 443
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 21/321 (6%)
Query: 173 KVFEEMTDRDIVAWNNLISGYARL--GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
++F +DIV+ N L++ G + A +F + Y ++ + +I + G+Y
Sbjct: 59 QIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNY 118
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
L +F +++ G+ PD + V A LG + E + K L T + N+L
Sbjct: 119 KRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSL 178
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPN 349
I+MY + + LFD+M +RDV+SW+ +I G + AI++F MQ + P+
Sbjct: 179 IDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPD 238
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY-----GCLVDLLGRAGRLDQ 404
+ T + LSAC L + K+ HH + L+D+ + G L
Sbjct: 239 EATVVSTLSACT-------ALKRLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCLSI 291
Query: 405 ALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP-EDTGNYVLLSNIYA 463
A + EEMP K + W +++S LE A L P D + + N Y
Sbjct: 292 ARAVFEEMPSK-NVICWTTMVSGYANCGELEEA----RELFEGSPIRDVVIWTAMINGYV 346
Query: 464 KHGRWEDVSRMRKLIRSKSMK 484
+ R+++ + + ++ + +K
Sbjct: 347 QFNRFDEAVALFREMQIRKVK 367
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 328/564 (58%), Gaps = 41/564 (7%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI---DVCNSGGDLAYASLLFKQ 71
D + +LQ+C+N +L ++HT ++K L + + +++ ++ G L YA LF
Sbjct: 32 DHAISLLQNCKNPKDLIQLHTLLIKTSLIKEKYAFGRLLLSFASFDNLGSLNYAQKLFDT 91
Query: 72 VKEP-NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
V P N F+Y MI+AY N A Y +ML D R + P+ FT +V +C+
Sbjct: 92 VDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQR---YVYPNDFTFTYVFSACSKF 148
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE----------------------- 167
GKQ HA + KF + + N+LLD YGK E
Sbjct: 149 NGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCL 208
Query: 168 ---------LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWT 218
L EA ++F+EM +RD+V+W ++ GYA G + +A LFD+MP +VSW+
Sbjct: 209 INGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWS 268
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
A+I GY IG Y++AL++F++MQ+ ++ DE+ + ++L ACA+LG+L+ G W+HMY DK+
Sbjct: 269 ALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKH 328
Query: 279 HLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLF 338
+ + ALI+MY KCG I+ A ++F + ++ V WS++IGGLA H KAI LF
Sbjct: 329 GIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELF 388
Query: 339 HEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
+M + P++IT+I +L+AC H+G + GL F+ M + + +++HYGC+VDLLGR
Sbjct: 389 AKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGR 448
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLL 458
AG L A ++E MP+K D IW +LLS+C+ + N+E+ L+ +EP++ NYVL
Sbjct: 449 AGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQNDMNYVLF 508
Query: 459 SNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
SN+YA RW+ ++R+ ++ + M+K PGCS IE+N V EFVS D + P + I+ LL
Sbjct: 509 SNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELNGAVHEFVSRDHSHPQSQVIYELL 568
Query: 519 ELLALH--QDRAKDVIDIMYEDIG 540
+L H Q+ + ++ IM E+ G
Sbjct: 569 HILTNHMVQEDHEPMMTIMAENQG 592
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/520 (39%), Positives = 309/520 (59%), Gaps = 24/520 (4%)
Query: 19 PILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG----DLAYASLLFKQVKE 74
P + +C + +L +IH +K + +++ C + DL YA +F Q+ +
Sbjct: 28 PQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 87
Query: 75 PNVFLYNAMIRAYTNNHLYG--LAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
N F +N +IR ++ + +AI L+ +M+ D + P++FT P V+K+CA
Sbjct: 88 RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSD----EFVEPNRFTFPSVLKACAKTGK 143
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE---------MTDR-- 181
GKQIH K+G + L+ +Y C + +A +F + MTDR
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203
Query: 182 ---DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+IV WN +I GY RLG K ARMLFDKM ++VSW MISGY+ G + +A++VFR
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+M+ I P+ +++VSVLPA ++LGSLELGEW+H+Y + + + V+ +ALI+MY KCG
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I +A +F+++ +V++WS +I G A HG+A AI F +M++ V P+D+ +I LL+
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H G EG YF M +E +IEHYGC+VDLLGR+G LD+A I MP+KPD
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
IW +LL +CR N+E+ L+ + P D+G YV LSN+YA G W +VS MR +
Sbjct: 444 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 503
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+ K ++K PGCSLI+++ + EFV DD+ P K+I +L
Sbjct: 504 KEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 317/546 (58%), Gaps = 44/546 (8%)
Query: 14 EDRFVPILQSCENLIELKKIHTQIL-KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
ED IL + LKK+H++IL L + L K++ + G+ Y +F ++
Sbjct: 38 EDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEI 97
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ NV +N MIR+Y NN LY A+ ++K M PD +T P V+K+C+
Sbjct: 98 TDKNVVFFNVMIRSYVNNGLYQDALLVFKTM-----ANQGFYPDNYTYPCVLKACSVSGN 152
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+G QIH V K GL + N L+ +YGKC L A +V +EM RD+V+WN++++G
Sbjct: 153 LWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAG 212
Query: 193 YARLGQMKKA-------------------------------------RMLFDKMPYTTIV 215
YA+ G+ A + +F K+ +++
Sbjct: 213 YAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLI 272
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
SW MI+ Y + EA+D++ QMQ+ G+EPD +SI SVLPAC L + LG IH Y
Sbjct: 273 SWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYV 332
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
++ L ++ NALI+MY KCGC+ +A +FDQM+ RDVVSW+++I G+ A+
Sbjct: 333 ERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAV 392
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
LF +M+ P+ I F+ +L+AC+H G +EG F+ M ++ I IEHY C+VDL
Sbjct: 393 ALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDL 451
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGRAG++D+A ++ +MPM+P+ ++WGSLLS+CR YS++ IA++A +HL L PE +G Y
Sbjct: 452 LGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYY 511
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
VLLSNIYAK GRW+DV +R ++ SK +KK PG S +E+N+ V F++GD + K+I+
Sbjct: 512 VLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIY 571
Query: 516 WLLELL 521
L +L
Sbjct: 572 KALGVL 577
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/481 (39%), Positives = 296/481 (61%), Gaps = 6/481 (1%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+E+E + + +L + L +IH L++ L QSN ++ + VC S + YA+ LF
Sbjct: 5 REIERKILRLLHGGKTRSHLTEIHGHFLRHGLQQSNQILAHFVSVCASLRRVPYATRLFA 64
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
PN+ L+NA+I+A++ + + + + + M I PD++TL + KS + L
Sbjct: 65 HTHNPNILLFNAIIKAHSLHPPFHASFSFFSLM-----KTRAISPDEYTLAPLFKSASNL 119
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
LG +HAHV + G H+ A L++Y C+ + +A KVF+EM D D+V WN +I
Sbjct: 120 RYYVLGGCVHAHVVRLGFTRHASVRVAALEVYASCERMGDASKVFDEMRDPDVVVWNLMI 179
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
G+ ++G ++ +F +M T+VSW M+S +AL++F +M G EPD+
Sbjct: 180 RGFCKMGDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDA 239
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQ 309
S+V+VLP CA+LG++++GEWIH Y + L+ T+ + N+L++ Y KCG + A +F+
Sbjct: 240 SLVTVLPVCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFND 299
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M ++VVSW+ +I GLA +G+ ++LF EM PND TF+G+L+ CAH G + G
Sbjct: 300 MASKNVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRG 359
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
F SM + K+EHYGC+VDLLGR G + +A ++I MP+KP A +WG+LLS+CR
Sbjct: 360 RDLFASMSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACR 419
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
TY + EIA A + L+ LEP ++GNYVLLSN+YA+ GRW++V ++R L+R +KK PG
Sbjct: 420 TYGDREIAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVKKVPGQ 479
Query: 490 S 490
S
Sbjct: 480 S 480
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/525 (39%), Positives = 319/525 (60%), Gaps = 21/525 (4%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSN---FLVTKMIDVCNSG--GDLAYASL 67
L + +++ C+NL ELKK HTQILK + +L+T+++ VC+ G +YA+
Sbjct: 17 LRNTLSRLIEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYATN 76
Query: 68 LFKQVKEPNVFLYNAMIRAYT-----NNHLYGLAINLYKQML-RDPRTGSLILPDKFTLP 121
+F +K P++ YN MIRAY ++ + A+ LYKQM +D I+P+ T P
Sbjct: 77 VFHMIKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKD------IVPNCLTFP 130
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
F++K C L + G+ IH V KFG N+L+ LY L A KVF+EM
Sbjct: 131 FLLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVT 190
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
D+V WN+++ G R G + A LF KM I++W ++I+G GS E+L++F +MQ
Sbjct: 191 DVVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQ 250
Query: 242 MVG---IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
++ ++PD+I+I SVL ACAQLG+++ G+W+H Y +N + VI AL+ MY KCG
Sbjct: 251 ILSDDMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCG 310
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ +A ++F++M E+D +W+ +I A HG KA + F EM++ V PN +TF+GLLS
Sbjct: 311 DVQKAFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLS 370
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
ACAH+G +G FD MKR + IE ++ HY C+VD+L RA D++ +I MPMKPD
Sbjct: 371 ACAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDV 430
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
+WG+LL C+ + N+E+ + HL+ LEP + YV +IYAK G ++ R+R ++
Sbjct: 431 YVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIM 490
Query: 479 RSKSM-KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+ K + KK PGCS+IE+N EVQEF +G ++ +K++ +L L+
Sbjct: 491 KEKRIEKKIPGCSMIEINGEVQEFSAGGSSELPMKELVLVLNGLS 535
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/499 (38%), Positives = 301/499 (60%), Gaps = 5/499 (1%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQVKEP 75
+ +++ C L ELK+IHTQ+L L LV + + N+ +L Y++ + + P
Sbjct: 13 ISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNP 72
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+F +N+MIRA++ + + + Y ++L + + PD +T F++++ A LL
Sbjct: 73 TLFTFNSMIRAHSKSSTPHRSFHFYSRILH---SAGYLAPDNYTFTFLVRTSAQLLAHGT 129
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G +H K+G + ++ L+ +Y + L H+VF + + D+V ++S A+
Sbjct: 130 GSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAK 189
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
+G + AR LFDKM + ++W AMISGY G EAL +F MQ G++ +E+S+VSV
Sbjct: 190 MGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSV 249
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L AC+ LG+L+ G W H Y ++N L + ALI+MY KCG +N+A ++F M E++V
Sbjct: 250 LSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNV 309
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
+WS+ IGGLA +G K + LF M++ V PN+ITF+ +L C+ G EG +F+S
Sbjct: 310 YTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFES 369
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M + + IE ++EHYGC+VDL GRAG LD+ALN I MP++P WG+LL++C+ Y N+E
Sbjct: 370 MSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNME 429
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ +A ++ LE ++ G YVLLSNIYA W+ VS +R+ + K ++K PGCS+IEV
Sbjct: 430 MGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVG 489
Query: 496 NEVQEFVSGDDTKPFLKDI 514
EV EF GD + P +I
Sbjct: 490 GEVHEFFVGDKSHPRYAEI 508
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/494 (40%), Positives = 314/494 (63%), Gaps = 8/494 (1%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SG--GDLAYASLLFKQVKE 74
V +L C++L EL++IH Q++K L F V+++I C+ SG G L YAS +F +++
Sbjct: 10 VSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQH 69
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
PN F++ A+I+ +++ ++ LY +ML S + +F++P V+K+C LL
Sbjct: 70 PNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGV---EFSIPSVLKACGKLLAFD 126
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+Q+H V K L N+++ +Y E+ A +VF+ M +RD+V+WN++I+GY
Sbjct: 127 EGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+ G+++ A+ +F+ M +V+WT+MIS Y +ALD+FR+M +G+ PD +IVS
Sbjct: 187 KAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVS 246
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHL-LRRTVICNALIEMYIKCGCINQASQLFDQMV-E 312
VL A A LG +E G+W+H Y N + L I +ALI+MY KCG I A +F +
Sbjct: 247 VLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHR 306
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
R++ W+++I GLA HG A +A+ +F EM+R+ + PN+ITF+GLLS C+H G EG Y
Sbjct: 307 RNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFY 366
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F+SM + I +I+HYGC++DL GRAGRL+ AL +I+ MP + D W ++LS+ +
Sbjct: 367 FESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG 426
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
++EI A + L P+D+ +YVLLSNIYAK GRW+DV+++R ++R + +KK GCS +
Sbjct: 427 HIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSM 486
Query: 493 EVNNEVQEFVSGDD 506
VN +V EF+ G +
Sbjct: 487 LVNGKVHEFLLGKE 500
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 305/522 (58%), Gaps = 44/522 (8%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLF 69
E R + + QSC N+ + K IH + L +N+ ++K+I C ++ G L+YASL+F
Sbjct: 2 EAWKRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIF 61
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
Q++ PN+F YN +IRAY+ + LA++ ++ ML D G PD+ T PF+I +C
Sbjct: 62 SQIQNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVG----PDQHTFPFIISACTN 117
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
L LGKQIH V K G+ S + AL+ Y +C + +A K+F+E+ + D+V WN
Sbjct: 118 SLWMLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNV 177
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L++GY R G EAL+ FR M + G+EPD
Sbjct: 178 LLNGYVRRGLAP-------------------------------EALNAFRNMLVSGVEPD 206
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLF 307
E + + L CAQLG+L+ G+WIH Y K L V I AL++MY KCGCI+++ ++F
Sbjct: 207 EFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVF 266
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ-RLKVPPNDITFIGLLSACAHTGFW 366
+ M +R+V SWS +IGG A HG KA+ MQ + P+ + +G++ ACAH G
Sbjct: 267 EGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQ 326
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
EG ++M+ + I K EHY C+VDLL RAG+LD+AL +I MPMKP A +WG+LLS
Sbjct: 327 EEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLS 386
Query: 427 SCRTYSNLEIAVIAMEHLLVL----EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
CRT++N+++A +A LL++ E+ G YV LSNIY + ED R+R++I K
Sbjct: 387 GCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKR 446
Query: 483 MKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
+K PGCSLIEV EV +FVSGD + P L I +L+L++L
Sbjct: 447 IKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLVSLQ 488
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/537 (38%), Positives = 320/537 (59%), Gaps = 47/537 (8%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL-----LFKQVKEPN 76
Q +L LK+ H IL+ Q +++ ++ + Y S +F V++PN
Sbjct: 42 QCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 101
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
VFL+N MI+ N+ AI LY +M+ + P+K+T P V+K+C+ + G
Sbjct: 102 VFLWNCMIKVCIENNEPFKAILLYYEMMV-----AHFRPNKYTYPAVLKACSDAGVVAEG 156
Query: 137 KQIHAHVCKFGLKSH--------------------------------SITENALLDLYGK 164
Q+HAH+ K GL ++ NA++D Y +
Sbjct: 157 VQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLR 216
Query: 165 CDELIEAHKVFEEMTDRDIVA-WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
E+ A ++FE M DR +++ WN +ISG++R G ++ AR FD+M +SW+AMI G
Sbjct: 217 FGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDG 276
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
Y G + EAL++F QMQ I P + + SVL ACA LG+L+ G WIH Y +N +
Sbjct: 277 YIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD 336
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
V+ +L++MY KCG I+ A ++F++M ++V SW+ +IGGLA HG+A AI LF +M
Sbjct: 337 GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD- 395
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+ PN+ITF+G+L+ACAH G +GL F+SM++++ +E +IEHYGC+VDLLGRAG L
Sbjct: 396 --INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLT 453
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A ++ +P +P +WG+LL +CR + N+E+ + LL LEP+++G Y LLSNIYA
Sbjct: 454 EAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYA 513
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN-NEVQEFVSGDDTKPFLKDIFWLLE 519
K GRWE+V +RKL++ + +K TPG S+I++ EV +F+ GD + P +KDI+ +L+
Sbjct: 514 KAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLD 570
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 22/238 (9%)
Query: 20 ILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L +C NL L + IHT + + L T ++D+ G + A +F+++
Sbjct: 308 VLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKE 367
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--GLLCPS 134
V +NAMI + AI+L+ +M I P++ T V+ +CA GL+
Sbjct: 368 VSSWNAMIGGLAMHGRAEDAIDLFSKM--------DINPNEITFVGVLNACAHGGLVQKG 419
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLIS-- 191
L ++ ++G++ ++DL G+ L EA KV + T+ W L+
Sbjct: 420 L-TIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGAC 478
Query: 192 ---GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
G LG+ + ++L + P + +T + + Y G + E +V + M+ GI+
Sbjct: 479 RKHGNVELGE-RVGKILLELEPQNS-GRYTLLSNIYAKAGRWEEVGEVRKLMKERGIK 534
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/518 (40%), Positives = 304/518 (58%), Gaps = 44/518 (8%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVK 73
R + + QSC N+ + K IH + L +N+ ++K+I C ++ G L+YASL+F Q++
Sbjct: 6 RCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQ 65
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
PN+F YN +IRAY+ + LA++ ++ ML D G PD+ T PF+I +C L
Sbjct: 66 NPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVG----PDQHTFPFIISACTNSLWM 121
Query: 134 SLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
LGKQIH V K G+ S + AL+ Y +C + +A K+F+E+ + D+V WN L++G
Sbjct: 122 LLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNG 181
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y R G EAL+ FR M + G+EPDE +
Sbjct: 182 YVRRGLA-------------------------------PEALNAFRNMLVSGVEPDEFCL 210
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMV 311
+ L CAQLG+L+ G+WIH Y K L V I AL++MY KCGCI+++ ++F+ M
Sbjct: 211 TTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMT 270
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ-RLKVPPNDITFIGLLSACAHTGFWNEGL 370
+R+V SWS +IGG A HG KA+ MQ + P+ + +G++ ACAH G EG
Sbjct: 271 KRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQ 330
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
++M+ + I K EHY C+VDLL RAG+LD+AL +I MPMKP A +WG+LLS CRT
Sbjct: 331 FLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCRT 390
Query: 431 YSNLEIAVIAMEHLLVL----EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
++N+++A +A LL++ E+ G YV LSNIY + ED R+R++I K +K
Sbjct: 391 HNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTK 450
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
PGCSLIEV EV +FVSGD + P L I +L+L++L
Sbjct: 451 PGCSLIEVEGEVNQFVSGDISHPCLAQIHEMLDLVSLQ 488
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/486 (39%), Positives = 302/486 (62%), Gaps = 7/486 (1%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
+ +E+E + +L E +L++IH L++ L+Q N +++ + +C S +AYA+ +
Sbjct: 4 ACREIERNILRLLHGRETRTQLREIHAHFLRHGLNQLNQILSHFVSICGSLNKMAYANRI 63
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
FKQ + P + L+NAMI+ Y+ N + + L+ M I PD++TL ++K+C+
Sbjct: 64 FKQTQNPTIILFNAMIKGYSLNGPFEESFRLFSSM-----KNRGIWPDEYTLAPLLKACS 118
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
L LGK +H V G + S +++LY C + +A KVF+EM RD++ WN
Sbjct: 119 SLGVLQLGKCMHKEVLVVGFEGFSAIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNL 178
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+I G+ + G + LF +M ++VSW MIS +EAL +F M G +PD
Sbjct: 179 MIHGFCKRGDVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPD 238
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLF 307
E ++V+VLP CA+LGS+++G+WIH Y + L R V + NAL++ Y K G A ++F
Sbjct: 239 EATVVTVLPICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVF 298
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D+M ++V+SW+T+I GLA +G + L EM V PND TF+G+LS CAH G +
Sbjct: 299 DEMPRKNVISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFE 358
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP-MKPDAKIWGSLLS 426
G SM H IE K+EHYGC+VDLLGR+G + +A ++I MP P+A +WGSLLS
Sbjct: 359 RGRELLASMVEHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLS 418
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+CRT+ ++E+A +A++ L+ LEP ++GNYVLLSN+YA+ RW+ V+ +R ++R K++KKT
Sbjct: 419 ACRTHGDVELAHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNVKKT 478
Query: 487 PGCSLI 492
PG S+I
Sbjct: 479 PGQSVI 484
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/533 (36%), Positives = 320/533 (60%), Gaps = 40/533 (7%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG---GDLAYASLLFKQVKEPNVF 78
+S +L L ++H +L+ Q +++ ++ C + + +A +F + PNVF
Sbjct: 41 KSITSLQYLTQLHALVLRSGHFQDHYVSGALLK-CYANPHFSNFDFALKVFSSIPNPNVF 99
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
++N +I+ N+ AI Y +M+ D R P+KFT P + K+C+ G+Q
Sbjct: 100 IWNIVIKGCLENNKLFKAIYFYGRMVIDAR------PNKFTYPTLFKACSVAQAVQEGRQ 153
Query: 139 IHAHVCKFGL------------------------------KSHSITENALLDLYGKCDEL 168
IH HV K G+ +S + N ++D Y KC L
Sbjct: 154 IHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVL 213
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A +F +M ++I +WN +I+G A+ G + AR LFD+M +SW++M+ GY G
Sbjct: 214 EAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAG 273
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
Y EAL++F+QMQ P + SVL AC+ +G+++ G W+H Y +N + V+
Sbjct: 274 RYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGT 333
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY KCG ++ ++F++M ER++ +W+ +IGGLA HG+A A+ LF ++Q ++ P
Sbjct: 334 ALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKP 393
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N IT +G+L+ACAH GF ++GL F +M+ + ++ ++EHYGC+VDLLGR+G +A ++
Sbjct: 394 NGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDL 453
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I MPMKP+A +WG+LL +CR + N ++A + LL LEP+++G YVLLSNIYAK GR+
Sbjct: 454 INSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRF 513
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+DVS++RKL++++ +K PG S++++N V EF GD + P +K+I+ L+++
Sbjct: 514 DDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKII 566
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/496 (38%), Positives = 307/496 (61%), Gaps = 8/496 (1%)
Query: 26 NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
+L+ + IH ++K F+ +I +S GDL A L+F ++ E ++ +N+MI
Sbjct: 146 SLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMIS 205
Query: 86 AYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
+ A+ L+K+M + + R P++ T+ V+ +CA + G+ ++
Sbjct: 206 GFVQGGSPEEALQLFKRMKMENAR------PNRVTMVGVLSACAKRIDLEFGRWACDYIE 259
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
+ G+ + I NA+LD+Y KC L +A ++F++M ++DIV+W +I GYA++G AR
Sbjct: 260 RNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARR 319
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEISIVSVLPACAQLG 263
+FD MP I +W A+IS Y G EAL +FR++Q+ +P+E+++ S L ACAQLG
Sbjct: 320 VFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLG 379
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
+++LG WIH+Y K + I +LI+MY KCG + +A ++F + RDV WS +I
Sbjct: 380 AMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIA 439
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
GLA HG AI LF +MQ KV PN +TF LL AC+H+G +EG ++F+ M+ + +
Sbjct: 440 GLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVV 499
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+HY C+VD+LGRAG L++A+ +IE+MP+ P A +WG+LL +CR Y N+E+A +A
Sbjct: 500 PGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSR 559
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVS 503
LL + + G YVLLSNIYAK G+W+ VSR+R+ ++ ++K PGCS IEVN + EF+
Sbjct: 560 LLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLV 619
Query: 504 GDDTKPFLKDIFWLLE 519
GD++ P +I+ L+
Sbjct: 620 GDNSHPLSTEIYSKLD 635
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 213/449 (47%), Gaps = 82/449 (18%)
Query: 18 VPIL-QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKE 74
VPIL C N LK++H +L+ L TK+ C +S L YA +F Q+
Sbjct: 33 VPILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPR 92
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
PN++ +N +IRA+ ++ + ++ QML + + P+ +T PFVIK+ +
Sbjct: 93 PNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQR----FPNSYTFPFVIKAATEVSSLL 148
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+ IH V K S N+L+ Y +L A+ VF ++ ++DIV+WN++ISG+
Sbjct: 149 AGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFV 208
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+ G S EAL +F++M+M P+ +++V
Sbjct: 209 QGG-------------------------------SPEEALQLFKRMKMENARPNRVTMVG 237
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
VL ACA+ LE G W Y ++N + ++ NA+++MY+KCG + A +LFD+M E+D
Sbjct: 238 VLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKD 297
Query: 315 VVSWSTVIGGLA-------------------------------NHGKAHKAIHLFHEMQR 343
+VSW+T+I G A +GK +A+ +F E+Q
Sbjct: 298 IVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQL 357
Query: 344 LK-VPPNDITFIGLLSACAHTGF-----WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
K PN++T L+ACA G W + +K + HI L+D+
Sbjct: 358 NKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTS------LIDMYS 411
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ G L++AL + + + D +W ++++
Sbjct: 412 KCGHLEKALEVFYSVERR-DVFVWSAMIA 439
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 134/282 (47%), Gaps = 7/282 (2%)
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLG 263
+FD++P + +W +I + + L VF QM P+ + V+ A ++
Sbjct: 86 VFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVS 145
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
SL G+ IH K I N+LI Y G ++ A +F ++VE+D+VSW+++I
Sbjct: 146 SLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMIS 205
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
G G +A+ LF M+ PN +T +G+LSACA G D ++R+ I+
Sbjct: 206 GFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERN-GID 264
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+ ++D+ + G L+ A + ++M K D W +++ + + A +
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKMEEK-DIVSWTTMIDGYAKVGDYDAARRVFD- 322
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGR-WEDVSRMRKLIRSKSMK 484
V+ ED + L + Y ++G+ E ++ R+L +K+ K
Sbjct: 323 --VMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTK 362
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/547 (37%), Positives = 319/547 (58%), Gaps = 46/547 (8%)
Query: 14 EDRFVPILQSCENLIELKKIHTQIL--KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
ED IL ++ LKK+H ++L +YL + + K++ V + G+ A +F +
Sbjct: 21 EDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGI-KLMRVYAACGEPGLARHIFDE 79
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ + NV +N MIR+Y NNHLY A+ +YK M +PD +T P V+K+ +
Sbjct: 80 ITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQG-----FVPDMYTYPCVLKASSRSD 134
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
+G QIH V K GL + N L+ +YGKC L EA +V +E+ RD+V+WN+++S
Sbjct: 135 SLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVS 194
Query: 192 GYARLGQMKKA-------------------------------------RMLFDKMPYTTI 214
YA+ G+ A + +F K+ ++
Sbjct: 195 VYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSV 254
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
+SW MI+ Y + EA+ ++ QM+ G+EPD +SIVSVLPA L +L LG +H +
Sbjct: 255 ISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKF 314
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
++ LL ++ NALI+MY KCGC+ A +F+QM RDVVSW+++I G+ A
Sbjct: 315 AERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDA 374
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVD 394
+ +F EM+ + P+ I F+ +L+AC+H G ++G YF+ M + I K+EH+ C+VD
Sbjct: 375 VAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVD 433
Query: 395 LLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGN 454
LLGRAG++D+A I +MP++PD ++WG LLS+CR YSN+ I ++A + LL+L PE +G
Sbjct: 434 LLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGY 493
Query: 455 YVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
YVLLSNIYAK GRW DV+ +R ++ K +KK PG S +E+N+ V F++GD + P K I
Sbjct: 494 YVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKI 553
Query: 515 FWLLELL 521
+ L++L
Sbjct: 554 YEELDVL 560
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/507 (39%), Positives = 314/507 (61%), Gaps = 5/507 (0%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS-GGDLAYASLLFKQVKEPNVFLY 80
++C + +LKKIH+Q++K L++ ++++ C S GD+ YA L+F Q++ PN+F +
Sbjct: 30 KNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCASPAGDINYAYLVFVQIQNPNIFAW 89
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N +IR ++ + + +I+LY ML S + P + T P V K+ A L S G Q+H
Sbjct: 90 NTIIRGFSRSSVPQNSISLYIDML----LTSPVQPQRLTYPSVFKAFAQLDLASEGAQLH 145
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
+ K GL++ S N +L +Y C EA KVF+ D DIVAWN +I G A+ G +
Sbjct: 146 GKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGLVD 205
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
++R LFDKM VSW +MISGY G + +AL++F++MQ+ IEP E ++VS+L ACA
Sbjct: 206 ESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACA 265
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
LG++ GEWIH Y K ++ A+I+MY KCG I++A Q+F R + W++
Sbjct: 266 CLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNS 325
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
+I GLA +G+ ++A+ LF +Q + P+D++FI +L+AC HTG ++ YF M+ +
Sbjct: 326 MILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKY 385
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
I+ I+H+ C+VD+LGRAG L++A +I M + PDA IWGSLL SC Y N+++A A
Sbjct: 386 KIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKYGNIKMAKRA 445
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQE 500
HL+ L P ++ ++VL++N YA +E+ + R ++ + K PGCS IEV EV E
Sbjct: 446 ANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCIEVGGEVHE 505
Query: 501 FVSGDDTKPFLKDIFWLLELLALHQDR 527
FV+G P +K+I+ +L++L L R
Sbjct: 506 FVAGGRAHPEIKEIYRVLDVLTLTNKR 532
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/415 (45%), Positives = 270/415 (65%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
+LPD FT FV+K+C L GK IH K G S+ +N +L+LYG C E+ +A
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
+FE+M RD V WN +I+ A+ G + A F +MP + SWT+MISG+ G E
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
A+D+F +++ + P+E+++VSVL ACA LG L+LG +H Y K+ R +CN LI+
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLID 185
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
MY+KCGC+ A ++F +M ER VVSWS +I GLA HG+A +A+ LF EM +L V PN +T
Sbjct: 186 MYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVT 245
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
FIGLL AC+H G +EG +F SM D+ + +IEHYGC+VDL RAG L++A I M
Sbjct: 246 FIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSM 305
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVS 472
P+KP+ +WG+LL C+ + N+++A A++HL L+P + G YV++SNIYA+ RWED +
Sbjct: 306 PIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAA 365
Query: 473 RMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
R+RKL++ + +KKT G S I VN V EFV+GD T P +DI + + L + R
Sbjct: 366 RVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKR 420
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 43/250 (17%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M++ + PD + VL AC +L + G+ IH K + N ++ +Y CG
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANH------------------------------- 328
+ A LF++M +RD V+W+ VI LA
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD-----SMKRDHHIE 383
GK ++AI LF +++ V PN++T + +L+ACA G + G + + KR+ H+
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+ L+D+ + G L+ A + EM + W ++++ + E A+
Sbjct: 181 NT------LIDMYVKCGCLENARRVFYEMEERTVVS-WSAMIAGLAMHGQAEEALCLFSE 233
Query: 444 LLVLEPEDTG 453
++ L + G
Sbjct: 234 MIKLGVKPNG 243
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/539 (36%), Positives = 305/539 (56%), Gaps = 42/539 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L + +L L+ +H++I+ L ++ L K++ S D+A A +F ++ E NV +
Sbjct: 49 VLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVII 108
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
N MIR+Y NN Y I ++ M + PD +T P V+K+C+ +GK+I
Sbjct: 109 INVMIRSYVNNGFYREGIQVFGTMC-----SCHVKPDHYTFPCVLKACSCSGNIVIGKKI 163
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H K GL S N L+ +YGKC L EA V +EM+ RD+V+WN+L++GYA+ +
Sbjct: 164 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRF 223
Query: 200 KKA-------------------------------------RMLFDKMPYTTIVSWTAMIS 222
A + +F KM ++VSW MI
Sbjct: 224 DDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 283
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
Y EA++++ M+ G EPD +SI SVLPAC +L LG+ IH Y ++ L+
Sbjct: 284 VYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 343
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
++ NALI+MY KCGC+++A +F+ M RDVVSW+ +I G+ A+ LF +MQ
Sbjct: 344 NLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQ 403
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+ P+ I F+ L+AC+H G EG F M + I ++EH C+VDLLGRAG++
Sbjct: 404 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 463
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIY 462
+A I+EMPM+P+ ++WG+LL +CR +SN +I ++A + L L PE +G YVLLSNIY
Sbjct: 464 KEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIY 523
Query: 463 AKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
AK GRWE+V+ +R +++SK +KK PG S +EVN + F+ GD + P +I+ L++L
Sbjct: 524 AKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVL 582
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 169/390 (43%), Gaps = 40/390 (10%)
Query: 17 FVPILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C N++ KKIH K LS + F+ ++ + G L+ A L+ ++
Sbjct: 144 FPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 203
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQM-----LRDPRTGSLILP------------- 115
+V +N+++ Y N + A+ + ++M D T + +LP
Sbjct: 204 RRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYV 263
Query: 116 -DKF---------TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
D F + +I P ++++ + G + +++ ++L G
Sbjct: 264 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDT 323
Query: 166 DELIEAHKVFEEMTDRDIVA----WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
L K+ + + ++ N LI YA+ G + +AR +F+ M +VSWTAMI
Sbjct: 324 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMI 383
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW-IHMYCDKNHL 280
S Y G +A+ +F +MQ G+ PD I+ V+ L AC+ G LE G + D +
Sbjct: 384 SAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 443
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFH 339
R ++++ + G + +A + +M +E + W ++G H ++ I L
Sbjct: 444 TPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVH--SNTDIGLLA 501
Query: 340 EMQRLKVPPNDITFIGLLSAC-AHTGFWNE 368
+ ++ P + LLS A G W E
Sbjct: 502 ADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 531
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/497 (38%), Positives = 299/497 (60%), Gaps = 8/497 (1%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPNV 77
LQ C ELK+IH ++LK L Q ++ +TK + C S L YA ++F P+
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
FL+N MIR ++ + ++ LY++ML S + +T P ++K+C+ L
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRML-----CSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIHA + K G ++ N+L++ Y AH +F+ + + D V+WN++I GY + G
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+M A LF KM +SWT MISGY EAL +F +MQ +EPD +S+ + L
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 255
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACAQLG+LE G+WIH Y +K + +V+ LI+MY KCG + +A ++F + ++ V +
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 315
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G A HG +AI F EMQ++ + PN ITF +L+AC++TG EG + F SM+
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
RD++++ IEHYGC+VDLLGRAG LD+A I+EMP+KP+A IWG+LL +CR + N+E+
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
E L+ ++P G YV +NI+A +W+ + R+L++ + + K PGCS I +
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 495
Query: 498 VQEFVSGDDTKPFLKDI 514
EF++GD + P ++ I
Sbjct: 496 THEFLAGDRSHPEIEKI 512
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/494 (39%), Positives = 303/494 (61%), Gaps = 12/494 (2%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
++K+IH L+ + Q+ L+ K++++ N L YA + +P +FLYN +I+AY+
Sbjct: 3 QVKQIHGYTLRNGIDQTKILIEKLLEIPN----LHYAHKVLHHSPKPTLFLYNKLIQAYS 58
Query: 89 NNHLYG-LAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG 147
++ + +LY QML LP++ T F+ +C L PSLG+ +H H K G
Sbjct: 59 SHPQHQHQCFSLYSQMLLHS-----FLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSG 113
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
+ ALLD+Y K L A K+F++M R + WN +++G+AR G M A LF
Sbjct: 114 FEPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFR 173
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLE 266
MP +VSWT MISGY+ Y EAL +F +M Q G+ P+ +++ S+ PA A LG+LE
Sbjct: 174 LMPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALE 233
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE-RDVVSWSTVIGGL 325
+G+ + Y KN + + NA++EMY KCG I+ A ++F+++ R++ SW+++I GL
Sbjct: 234 IGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGL 293
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A HG+ K + L+ +M P+D+TF+GLL AC H G +G F SM +I K
Sbjct: 294 AVHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPK 353
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+EHYGC+VDLLGRAG+L +A +I+ MPMKPD+ IWG+LL +C + N+E+A IA E L
Sbjct: 354 LEHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLF 413
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
LEP + GNYV+LSNIYA G+W+ V+++RK+++ + K+ G S IE ++ +F+ D
Sbjct: 414 ALEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVED 473
Query: 506 DTKPFLKDIFWLLE 519
+ P +IF LL+
Sbjct: 474 RSHPESNEIFALLD 487
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/533 (36%), Positives = 319/533 (59%), Gaps = 40/533 (7%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG---GDLAYASLLFKQVKEPNVF 78
+S +L L ++H +L+ Q +++ ++ C + + +A +F + PNVF
Sbjct: 41 KSITSLQYLTQLHGLVLRSGHFQDHYVSGALLK-CYANPHFSNFDFALKVFSSIPNPNVF 99
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
++N +I+ N+ AI Y +M+ D R P+KFT P + K+C+ G+Q
Sbjct: 100 IWNIVIKGCLENNKLFKAIYFYGRMVIDAR------PNKFTYPTLFKACSVAQAVQEGRQ 153
Query: 139 IHAHVCKFGL------------------------------KSHSITENALLDLYGKCDEL 168
IH HV K G+ +S + N ++D Y KC L
Sbjct: 154 IHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVL 213
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A +F +M ++I +WN +I+G A+ G + AR LFD+M +SW++M+ GY G
Sbjct: 214 EAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAG 273
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
Y EAL++F+QMQ P + SVL AC+ +G+++ G W+H Y +N + V+
Sbjct: 274 RYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGT 333
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY KCG ++ ++F++M ER++ +W+ +IGGLA HG+A A+ LF ++Q ++ P
Sbjct: 334 ALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKP 393
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N IT +G+L+ACAH GF ++GL F +M+ + ++ ++EHYGC+VDLLGR+G +A ++
Sbjct: 394 NGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDL 453
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I MPMKP+A +WG+LL +CR + N ++A + LL LEP+++G YVLLSNIYAK GR+
Sbjct: 454 INSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRF 513
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+DVS++RKL++ + +K PG S++++N V EF GD + P +K+I+ L+++
Sbjct: 514 DDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKII 566
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 115/268 (42%), Gaps = 19/268 (7%)
Query: 16 RFV--PILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
RF+ +L +C N+ + + +H + + + L T ++D+ G L +F+
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++KE +F +NAMI + A+ L+ + L++ R + P+ TL V+ +CA
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSK-LQEGR----MKPNGITLVGVLTACAHA 408
Query: 131 LCPSLGKQIHAHVCKF-GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNN 188
G +I + +F G+ ++DL G+ EA + M + + W
Sbjct: 409 GFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGA 468
Query: 189 LISGYARLGQM----KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
L+ G + ++L + P + + + + Y +G + + + + M+ G
Sbjct: 469 LLGACRIHGNFDLAERVGKILLELEPQNS-GRYVLLSNIYAKVGRFDDVSKIRKLMKDRG 527
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIH 272
I+ + VS++ + ++G+ H
Sbjct: 528 IK--TVPGVSIVDLNGTVHEFKMGDGSH 553
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/537 (38%), Positives = 320/537 (59%), Gaps = 47/537 (8%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL-----LFKQVKEPN 76
Q +L LK+ H IL+ Q +++ ++ + Y S +F V++PN
Sbjct: 43 QCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 102
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
VFL+N MI+ N+ AI LY +M+ + P+K+T P V+K+C+ + G
Sbjct: 103 VFLWNCMIKVCIENNEPFKAILLYYEMVV-----AHSRPNKYTYPAVLKACSDSGVVAEG 157
Query: 137 KQIHAHVCKFGLKSH--------------------------------SITENALLDLYGK 164
Q+HAH+ K GL ++ NA++D Y +
Sbjct: 158 VQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLR 217
Query: 165 CDELIEAHKVFEEMTDRDIVA-WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
E+ A ++FE M DR +++ WN +ISG++R G ++ AR FD+M +SW+AMI G
Sbjct: 218 FGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDG 277
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
Y G + EAL++F QMQ I P + + SVL ACA LG+L+ G WIH Y +N +
Sbjct: 278 YIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD 337
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
V+ +L++MY KCG I+ A ++F++M ++V SW+ +IGGLA HG+A AI LF +M
Sbjct: 338 GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD- 396
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+ PN+ITF+G+L+ACAH G +GL F+SM++++ +E +IEHYGC+VDLLGRAG L
Sbjct: 397 --IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLT 454
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A ++ +P +P +WG+LL +CR + N+E+ + LL LEP+++G Y LLSNIYA
Sbjct: 455 EAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYA 514
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN-NEVQEFVSGDDTKPFLKDIFWLLE 519
K GRWE+V +RKL++ + +K TPG S+I++ EV +F+ GD + P +KDI+ +L+
Sbjct: 515 KAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLD 571
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 22/238 (9%)
Query: 20 ILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L +C NL L + IHT + + L T ++D+ G + A +F+++
Sbjct: 309 VLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKE 368
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--GLLCPS 134
V +NAMI + AI+L+ +M I P++ T V+ +CA GL+
Sbjct: 369 VSSWNAMIGGLAMHGRAEDAIDLFSKM--------DIYPNEITFVGVLNACAHGGLVQKG 420
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLIS-- 191
L ++ ++G++ ++DL G+ L EA KV + T+ W L+
Sbjct: 421 L-TIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGAC 479
Query: 192 ---GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
G LG+ + ++L + P + +T + + Y G + E +V + M+ GI+
Sbjct: 480 RKHGNVELGE-RVGKILLELEPQNS-GRYTLLSNIYAKAGRWEEVGEVRKLMKERGIK 535
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/575 (36%), Positives = 323/575 (56%), Gaps = 83/575 (14%)
Query: 20 ILQSCENLIELKKIHTQILKYLL-----SQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
IL+ C+ + +L +IH ++K L N L + I + S + YA +F+Q+ E
Sbjct: 30 ILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTS---MDYAVSIFRQIDE 86
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P+ YN MIR +T AI L+K+M + + PD+FT P ++K C+ L S
Sbjct: 87 PDSPAYNIMIRGFTLKQSPHEAILLFKEMHENS-----VQPDEFTFPCILKVCSRLQALS 141
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKC----------DELIEAH------------ 172
G+QIHA + K G SH +N L+ +Y C DE+ E +
Sbjct: 142 EGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYT 201
Query: 173 ---------KVFEEMTDRDIV----------------------AWNN------------- 188
K+F EM + DI W N
Sbjct: 202 KSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPT 261
Query: 189 ----LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
L+ YA+ GQ+ AR LFD+M +V+W+AMISGY+ EALD+F +MQ
Sbjct: 262 LITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKAN 321
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
I+P+EI++VS+L +CA LG+LE G+W+H + K + + AL++ Y KCG + +
Sbjct: 322 IDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSI 381
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++F +M ++V+SW+ +I GLA++G+ KA+ F+ M V PND+TFIG+LSAC+H G
Sbjct: 382 EVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAG 441
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+EG F SM RD IE +IEHYGC+VD+LGRAG +++A I+ MP++P+A IW +L
Sbjct: 442 LVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTL 501
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L+SC+ + N+EI +++ L++LEP +G+Y+LLSNIYA GRWED ++R ++ K +K
Sbjct: 502 LASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIK 561
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
KTPGCSLIE++ + EF + D+ ++I+ +E
Sbjct: 562 KTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIE 596
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 170/378 (44%), Gaps = 48/378 (12%)
Query: 8 LSIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
L I+ E V +L +C L +L+ I+ + + L + L+T ++D+ G +
Sbjct: 219 LDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDT 278
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A LF Q+ +V ++AMI Y+ A++L+ +M + + I P++ T+ ++
Sbjct: 279 ARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQK-----ANIDPNEITMVSIL 333
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
SCA L GK +H + K +K AL+D Y KC + + +VF +M ++++
Sbjct: 334 SSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVL 393
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+W LI G A GQ KK AL+ F M
Sbjct: 394 SWTVLIQGLASNGQGKK-------------------------------ALEYFYLMLEKN 422
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVICNALIEMYIKCGCINQA 303
+EP++++ + VL AC+ G ++ G + + ++ + R ++++ + G I +A
Sbjct: 423 VEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEA 482
Query: 304 SQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHE-MQRLKV--PPNDITFIGLLSA 359
Q M ++ + V W T++ K HK + + E +++L + P + +I L +
Sbjct: 483 FQFIKNMPIQPNAVIWRTLLASC----KVHKNVEIGEESLKQLIILEPTHSGDYILLSNI 538
Query: 360 CAHTGFWNEGLMYFDSMK 377
A G W + L MK
Sbjct: 539 YASVGRWEDALKVRGEMK 556
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/462 (41%), Positives = 291/462 (62%), Gaps = 5/462 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L + + ELK++H +LK S+ ++++ VC +YA L+F+ + V
Sbjct: 21 LLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTH 80
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +R++ AI+L+ + LR+ I PD +T FV+K+C+ LL GK +
Sbjct: 81 WNTCLRSFAEGDSPADAISLFYR-LREFD----ISPDHYTCSFVLKACSRLLDVRNGKIV 135
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H +V K GL+S+ +N ++ LY C E+ A KVF++M RD++ WN +I+ ++G
Sbjct: 136 HGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDA 195
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
+ A LF +MP + SWT+MI GY G EA+D+F +M+ G+ P+E+++V+VL AC
Sbjct: 196 EGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVAC 255
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A +G+L LG IH + +++ + +CN LI+MY+KCGC+ A ++FD M ER VVSWS
Sbjct: 256 ADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWS 315
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I GLA HG+A A+ LF++M V PN +TFIG+L AC+H G +G YF SM RD
Sbjct: 316 AMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRD 375
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
+ I +IEHYGC+VDL RAG L +A I MP+ P+ +WG+LL C+ + N+++A
Sbjct: 376 YGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEE 435
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
A HL L+P + G YV+LSNIYA+ GRWEDV+R+RKL+R +
Sbjct: 436 ATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDR 477
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/496 (39%), Positives = 302/496 (60%), Gaps = 6/496 (1%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC-NSGGDLAYASLLFKQVKEPNVFLYNA 82
C N+ +L+KIH I+K L+ ++++ C +S GD+ YA LLF + PN++ +N
Sbjct: 35 CTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSSGDINYAYLLFTTIPSPNLYCWNT 94
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+IR ++ + LAI+L+ ML S +LP + T P V K+ A L G Q+H
Sbjct: 95 IIRGFSRSSTPHLAISLFVDML-----CSSVLPQRLTYPSVFKAYAQLGAGYDGAQLHGR 149
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V K GL+ +N ++ +Y L EA +VF+E+ D D+VA N++I G A+ G++ K+
Sbjct: 150 VVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCGEVDKS 209
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R LFD MP T V+W +MISGY EAL++FR+MQ +EP E ++VS+L ACA L
Sbjct: 210 RRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSACAHL 269
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
G+L+ GEW+H Y + H ++ A+I+MY KCG I +A ++F+ R + W+++I
Sbjct: 270 GALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNSII 329
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
GLA +G KAI F +++ + P+ ++FIG+L+AC + G + YF M + I
Sbjct: 330 IGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNKYEI 389
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
E I+HY C+V++LG+A L++A +I+ MP+K D IWGSLLSSCR + N+EIA A +
Sbjct: 390 EPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNVEIAKRAAQ 449
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
+ L P D Y+L+SN+ A ++E+ R L+R + +K PGCS IE+ EV EF+
Sbjct: 450 RVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIELYGEVHEFL 509
Query: 503 SGDDTKPFLKDIFWLL 518
+G P ++I++LL
Sbjct: 510 AGGRLHPKAREIYYLL 525
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/487 (37%), Positives = 301/487 (61%), Gaps = 19/487 (3%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L++C L+++H +I++ L Q +F++++ + +CNS + +Y + +F V P+ L
Sbjct: 79 LLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVL 138
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N I+ Y+ N+ L ++L+ +M R S +PDKFT P +IK+C+ + G
Sbjct: 139 WNTYIKGYSENYSVSLTVSLFIRMKR-----SDAVPDKFTYPSLIKACSKVCGVKEGVAF 193
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H + G+ +L+DLYGKC E++ A KVF+EM +R++V+W +I+GYA +
Sbjct: 194 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDL 253
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ-------------MVGIE 246
+AR LFD+MP VSW A+ISGY G A +F +M ++
Sbjct: 254 VEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVK 313
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL-LRRTVICNALIEMYIKCGCINQASQ 305
PDE +VS++ AC+Q+GSLEL +W+ Y K+ + + R + ALI+M KCG +++A++
Sbjct: 314 PDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATK 373
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
LF++M +RD++S+ +++ GL+ HG +A+ LF M + P+D+ F +L+AC+ G
Sbjct: 374 LFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGL 433
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+EG YF+SMK D+ I +HY C+VDLLGRAGRL +A +++ MP++P A WG+LL
Sbjct: 434 VDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALL 493
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+C+ + ++E+ + + L LEP++ GNYVLLSNIYA +W DVS +R +R + ++K
Sbjct: 494 GACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRK 553
Query: 486 TPGCSLI 492
PGCS I
Sbjct: 554 IPGCSWI 560
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/441 (41%), Positives = 281/441 (63%), Gaps = 5/441 (1%)
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
++NA+I + + + L+ + M+R + + T V+ +C LG Q
Sbjct: 128 MWNALISGHNRSGRFELSCCSFVDMVRASAMATAV-----TYVSVLSACGKGKDLLLGMQ 182
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+H V + G+ ENAL+D+Y +C ++ A +FE M R + +W ++ISG R GQ
Sbjct: 183 VHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQ 242
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ +AR LFD MP ++WTAMI GY +G + +AL+ FR MQ+ + DE ++VSV+ A
Sbjct: 243 VDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTA 302
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CAQLG+LE GEW +Y + + + NALI+MY KCG I +A +F M RD +W
Sbjct: 303 CAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTW 362
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ +I GLA +G+ +AI +F+ M R P+++TF+G+L+AC H G ++G +F SM
Sbjct: 363 TAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTE 422
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
++I + HYGCL+D+LGRAG+L +AL+ I++MPMKP++ IWG+LL+SCR Y N EI
Sbjct: 423 AYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGE 482
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
+A E LL L+P+++ Y+LLSN+YAK RW+DV R+R++I K +KK PGCS+IE+N +
Sbjct: 483 LAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGII 542
Query: 499 QEFVSGDDTKPFLKDIFWLLE 519
EFV+ D + P K+I+ LE
Sbjct: 543 HEFVAADRSHPMNKEIYSKLE 563
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 155/329 (47%), Gaps = 29/329 (8%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQ-----IHAHVCKFGLKSHSITENALLDLYGKCDELI 169
PD +T P ++K+ A ++ IHAHV KFG++S++ ++L+ +Y +
Sbjct: 49 PDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGA 108
Query: 170 EAHKVFE----EMTDRDIVAWNNLISGYARLGQMKKARMLFDKM----PYTTIVSWTAMI 221
A V E V WN LISG+ R G+ + + F M T V++ +++
Sbjct: 109 AARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVL 168
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
S + V +++ G+ PD+ +++ A+ G ++ W+ + +
Sbjct: 169 SACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMD-AAWVLF---EGMQM 224
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
R ++I ++ G +++A LFD M ERD ++W+ +I G G+ A+ F M
Sbjct: 225 RSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYM 284
Query: 342 QRLKVPPNDITFIGLLSACAH-----TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
Q KV ++ T + +++ACA TG W M +K D + + L+D+
Sbjct: 285 QICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGN------ALIDMY 338
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ G +++AL++ ++M + D W +++
Sbjct: 339 SKCGSIERALDVFKDMHNR-DKFTWTAII 366
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/504 (38%), Positives = 308/504 (61%), Gaps = 20/504 (3%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPNV 77
+ C+++ +L++ H+QI++ LS N L+ +I+ C ++ L YA LF + +P+
Sbjct: 29 FEKCQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDA 88
Query: 78 FLYNAMIRAYTNNHLYGLAIN----LYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
FLYN +I+ + ++ L L N LY ML++ +LP+ FT P ++ +C +
Sbjct: 89 FLYNTIIKGFLHSQL--LPTNSILLLYSHMLQNS-----VLPNNFTFPSLLIACRKI--- 138
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G QIHAH+ KFG +HS+ N+L+ +Y L EA +VF + D V+W +LISGY
Sbjct: 139 QHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGY 198
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP-DEISI 252
++ G + +A +F MP SW AM++ Y + EA +F +M+ D+
Sbjct: 199 SKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVA 258
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
++L AC LG+L+ G+WIH Y +N + + + A+++MY KCGC+ +A Q+F +
Sbjct: 259 TTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPL 318
Query: 313 --RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
R + SW+ +IGGLA HG AI LF EM+R +V P+DITF+ LL+ACAH+G EG
Sbjct: 319 PCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGR 378
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
YF M R + IE ++EH+GC+VDLLGRAG + +A +I+EMP+ PD + G+LL +C+
Sbjct: 379 NYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKK 438
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ N+E+ ++ LEP ++G YVLL+N+YA G+WED +++RKL+ + +KK PG S
Sbjct: 439 HRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFS 498
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDI 514
+IE+ V EF++G+ P K++
Sbjct: 499 MIELQGTVHEFIAGERNHPQAKEL 522
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/540 (36%), Positives = 316/540 (58%), Gaps = 43/540 (7%)
Query: 20 ILQSCENLIELKKIHTQI-LKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVF 78
IL + L K+H++I + L L K++ ++ G+ + A +F + E NV
Sbjct: 44 ILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVV 103
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+N MIR+Y NN+LY A+++++ ML PD +T P V+K+C+GL +G Q
Sbjct: 104 FFNVMIRSYVNNNLYVEALSIFQVML-----SCAFNPDHYTFPCVLKACSGLDNLRVGLQ 158
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+H + K GL ++ NAL+ +YGKC L EA KV ++M RD+V+WN++++GYA+ GQ
Sbjct: 159 VHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQ 218
Query: 199 MKKA-------------------------------------RMLFDKMPYTTIVSWTAMI 221
A +F++M ++SW MI
Sbjct: 219 FDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMI 278
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
+ Y + EA+ +F QM+ G++PD ++I S+LPAC L +L LG +H Y +K +L
Sbjct: 279 AIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQ 338
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
++ NAL++MY KCGC+ +A +FD+M RDVVSW++++ G+ + A+ LF +M
Sbjct: 339 PNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKM 398
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
P+ I F+ +LSAC+HTG ++G YF M + I +IEH+ C+VDL GRAG
Sbjct: 399 LDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGE 458
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
+++A + I++MPM+P+ ++WG+LLS+CR +S ++I ++A + L L P+ +G YVLLSNI
Sbjct: 459 VEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNI 518
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
YAK G W+DV +R ++ +KK PG S +E+N +V F++GD P K+I+ L++L
Sbjct: 519 YAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVL 578
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/540 (36%), Positives = 316/540 (58%), Gaps = 43/540 (7%)
Query: 20 ILQSCENLIELKKIHTQI-LKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVF 78
IL + L K+H++I + L L K++ ++ G+ + A +F + E NV
Sbjct: 44 ILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVV 103
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+N MIR+Y NN+LY A+++++ ML PD +T P V+K+C+GL +G Q
Sbjct: 104 FFNVMIRSYVNNNLYVEALSIFQVML-----SCAFNPDHYTFPCVLKACSGLDNLRVGLQ 158
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+H + K GL ++ NAL+ +YGKC L EA KV ++M RD+V+WN++++GYA+ GQ
Sbjct: 159 VHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQ 218
Query: 199 MKKA-------------------------------------RMLFDKMPYTTIVSWTAMI 221
A +F++M ++SW MI
Sbjct: 219 FDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMI 278
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
+ Y + EA+ +F QM+ G++PD ++I S+LPAC L +L LG +H Y +K +L
Sbjct: 279 AIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLR 338
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
++ NAL++MY KCGC+ +A +FD+M RDVVSW++++ G+ + A+ LF +M
Sbjct: 339 PNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKM 398
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
P+ I F+ +LSAC+HTG ++G YF M + I +IEH+ C+VDL GRAG
Sbjct: 399 LDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGE 458
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
+++A + I++MPM+P+ ++WG+LLS+CR +S ++I ++A + L L P+ +G YVLLSNI
Sbjct: 459 VEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNI 518
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
YAK G W+DV +R ++ +KK PG S +E+N +V F++GD P K+I+ L++L
Sbjct: 519 YAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVL 578
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/500 (38%), Positives = 316/500 (63%), Gaps = 14/500 (2%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
E +K++ ++K L ++ ++D+ G + +F+++ + +V +N +I Y
Sbjct: 150 EGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYV 209
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK--- 145
Y A++++++M + S + P++ T+ + +C L LGK+IH +V +
Sbjct: 210 KCRRYEDAVDVFRRMQQQ----SSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLG 265
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
F +K NAL+D+Y KC L A ++F +M + ++ W +++SGY GQ+ +AR L
Sbjct: 266 FTIK----IGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEAREL 321
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
F++ P +V WTAMI+GY + +A+ +FR+MQ+ + PD ++V++L CAQLG+L
Sbjct: 322 FERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTL 381
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
E G+WIH Y D+N ++ V+ ALIEMY KCG I ++ ++F+ + E+D SW+++I GL
Sbjct: 382 EQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGL 441
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A +GK KA+ LF EM + V P+DITFIG+LSAC+H G EG +F SM + IE K
Sbjct: 442 AMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPK 501
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI---WGSLLSSCRTYSNLEIAVIAME 442
+EHYGCL+DLLGRAG+LD+A +IE+ P + I +G+LLS+CRT+ N+E+ +
Sbjct: 502 LEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAK 561
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
L+ +E D+ + LL+NIYA RWEDV+++R+ ++ +KK PGCS +EVN V EF+
Sbjct: 562 RLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFL 621
Query: 503 SGDDTKPFLKDIFWLLELLA 522
GD + P +++I+ +L+ +A
Sbjct: 622 VGDASHPEMREIYSMLDSIA 641
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 215/439 (48%), Gaps = 71/439 (16%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN--SGGDLAYASLLFKQVKEPNV 77
+L++C+++ LK+I TQIL+ QS + K + C S G+L YA +F + P +
Sbjct: 38 LLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGL 97
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F+YN +I+A+T N + A+ L++Q+ + + PD FT PFV K+ L G+
Sbjct: 98 FIYNLVIKAFTKNGSFRKAVLLFRQLREEGLS-----PDNFTYPFVFKAIGCLGEVREGE 152
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+++ V K GL+ + N+L+D+Y + + +VFEEM RD+V+WN LISGY +
Sbjct: 153 KVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCR 212
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIVSVL 256
+ Y +A+DVFR+M Q + P+E ++VS L
Sbjct: 213 R-------------------------------YEDAVDVFRRMQQQSSLRPNEATVVSTL 241
Query: 257 PACAQLGSLELGEWIH-------------------MYCDKNHLL----------RRTVIC 287
AC L LELG+ IH MYC HL +TVIC
Sbjct: 242 SACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVIC 301
Query: 288 -NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
+++ Y+ CG +++A +LF++ RDVV W+ +I G + A+ LF EMQ +V
Sbjct: 302 WTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRV 361
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
P+ T + LL+ CA G +G + ++ I L+++ + G ++++L
Sbjct: 362 SPDRFTLVALLTGCAQLGTLEQG-KWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSL 420
Query: 407 NIIEEMPMKPDAKIWGSLL 425
I + K D W S++
Sbjct: 421 EIFNGLKEK-DTASWTSII 438
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 7/276 (2%)
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
+G + A +F+ + + + +I +T GS+ +A+ +FRQ++ G+ PD + V
Sbjct: 79 IGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFV 138
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
A LG + GE ++ + K+ L T +CN+L++MY + G + Q+F++M +RDV
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDV 198
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VSW+ +I G + A+ +F MQ+ + PN+ T + LSAC G
Sbjct: 199 VSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHR 258
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
++ KI + LVD+ + G L A I +MP+K W S++S L
Sbjct: 259 YVREQLGFTIKIGN--ALVDMYCKCGHLSIAREIFNDMPIKT-VICWTSMVSGYVNCGQL 315
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
+ A E V D + + N Y + R++D
Sbjct: 316 DEARELFERSPV---RDVVLWTAMINGYVQFNRFDD 348
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 141/339 (41%), Gaps = 78/339 (23%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLV---TKMIDVCNSGGDLAYA 65
S++ E V L +C L ++ ++ +I +Y+ Q F + ++D+ G L+ A
Sbjct: 229 SLRPNEATVVSTLSACIAL-KMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIA 287
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNH------------------LYGLAINLYKQMLRDP 107
+F + V + +M+ Y N L+ IN Y Q R
Sbjct: 288 REIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFD 347
Query: 108 RTGSL--------ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALL 159
+L + PD+FTL ++ CA L GK IH ++ + + ++ AL+
Sbjct: 348 DAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALI 407
Query: 160 DLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA 219
++Y KC + ++ ++F + ++D +W ++I G A G+ KA
Sbjct: 408 EMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKA----------------- 450
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
L++F +M G++PD+I+ + VL AC+ G +E G + H
Sbjct: 451 --------------LELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEG--------RKH 488
Query: 280 LLRRTVICN---------ALIEMYIKCGCINQASQLFDQ 309
T + LI++ + G +++A +L ++
Sbjct: 489 FRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEK 527
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/489 (39%), Positives = 293/489 (59%), Gaps = 8/489 (1%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD--LAYASLLFKQVKEPNVFLYNAMIRA 86
E K++H ++ L Q + K+I + S L +A LLF + P+ +LYN M R
Sbjct: 3 EAKRLHAHLITSGLHQQENHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTMFRV 62
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
Y + A+ L++ MLR PD +T PF++K+C+ L G+++H KF
Sbjct: 63 YAASPTPLHALLLHRHMLRHGPP-----PDTYTFPFLLKACSALAHLPKGQELHCQALKF 117
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
GL H EN+L+ LYG + A +VF+ M RDI +W L++ YA +K AR +F
Sbjct: 118 GLGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAARKVF 177
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
D+MP +++S++AMI+ Y + EALD+FR++ V IEP + ++SVL ACA LG+L+
Sbjct: 178 DEMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGALD 237
Query: 267 LGEWIHMY-CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+G W++ Y C + I ALI+M+ KCG I A +F+ E+ V W+ ++ GL
Sbjct: 238 VGRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGL 297
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A HG + I F +M V PN +TF+ LLS C+H+G NEGL YFD M+ D +E
Sbjct: 298 AMHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPT 357
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+EH+GC+VDLLGRAG +DQA+ +I EMP +P+A IWGSLL++CR Y N+EI +A + L+
Sbjct: 358 VEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGELAAQWLI 417
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
EP + Y+ L ++Y + GRW++V +++ ++ +K PGCSLIEV EFV GD
Sbjct: 418 KDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGD 477
Query: 506 DTKPFLKDI 514
+ P +I
Sbjct: 478 KSHPCAVEI 486
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/530 (37%), Positives = 309/530 (58%), Gaps = 40/530 (7%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
LE F+ ++ + + +L++IH Q+ + + S+ +VT+ I C+S + YA +F++
Sbjct: 41 LETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRF 100
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ N +L+NA+IR N + +I+ + ML+ I PD+ T PFV+KS A L
Sbjct: 101 ELKNSYLFNALIRGLAENSRFESSISFFVLMLKWK-----ISPDRLTFPFVLKSAAALSN 155
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE--------------- 177
+G+ +H + KFGL+ S +L+D+Y K +EL A KVF+E
Sbjct: 156 GGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNV 215
Query: 178 --------------------MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
M +D +WN+LI+G+ ++G M +A+ LF KMP +VSW
Sbjct: 216 LIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSW 275
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
T M++G++ G +AL+ F M G P++ +IVS L ACA++G+L+ G IH Y
Sbjct: 276 TTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSG 335
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
N VI AL++MY KCG I A ++F + E+ ++ WS +I G A HG KA+
Sbjct: 336 NGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQY 395
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F M+ P+ + F+ +L+AC+H+G NEGL +FD+M+R + IE ++HY +VD+LG
Sbjct: 396 FEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLG 455
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
RAGRLD+AL I MP+ PD +WG+L +CRT+ N+E+A +A + LL LEP+ G+YV
Sbjct: 456 RAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVF 515
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
LSN YA GRW+D R+R +R K PG S IEV++++ FV+GD+T
Sbjct: 516 LSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNT 565
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/584 (35%), Positives = 322/584 (55%), Gaps = 69/584 (11%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
+S + L ++ + L C +L ++K+IH Q+LK L + +F+ K+I + + A
Sbjct: 11 VSKRRLLEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVN 70
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F Q+++P+V LYN +IRA+ N LA +++ +M S + D FT PF++K+C
Sbjct: 71 VFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEM-----QDSGVCADNFTYPFLLKAC 125
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD--------------------- 166
+G + + + IHA V K G N+L+D Y KC
Sbjct: 126 SGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVS 185
Query: 167 ------------ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA------------ 202
EL EA ++F+EM +RD V+WN ++ GY + G+M A
Sbjct: 186 WNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNV 245
Query: 203 -------------------RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
R+LFDKMP +V WT MISGY G +A++++ QM+
Sbjct: 246 VSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEA 305
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G++ D+ +++S+L ACA G L LG+ +H ++ T + NALI+MY KCG + A
Sbjct: 306 GLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENA 365
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+F MV +DVVSW+ +I GLA HG KA+ LF M+ P+ +TF+G+L AC H
Sbjct: 366 LSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHA 425
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
GF +EGL YF +M+RD+ + ++EHYGC+VDLLGR GRL +A ++ MP++P+A IWG+
Sbjct: 426 GFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGT 485
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL +CR +S +A + L+ E D+GN +LSNIYA G W++ + +R ++S S+
Sbjct: 486 LLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSI 545
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
+K G S IEV++EV EF D + P I+ ++ L H ++
Sbjct: 546 QKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGLGQHINK 589
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/499 (39%), Positives = 308/499 (61%), Gaps = 23/499 (4%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMI--DVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+LK++H Q++K + +++ + DL YA +F+ + PN F YN +IRA
Sbjct: 3 DLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRA 62
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
+ ++ A+ ++ +M+ D + P+ FT P V K+C G+Q+H KF
Sbjct: 63 LSESNDPCDALLVFIEMVED----CSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKF 118
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVF---------------EEMTDRDIVAWNNLIS 191
GL S + ++ +Y C + +AH++F + D D+V WN +I
Sbjct: 119 GLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMID 178
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GY R+G+++ AR LFD+MP ++VSW MI+GY G + EA++VFR+MQM + P+ ++
Sbjct: 179 GYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVT 238
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VSVLPA ++LG+LELG+W+H+Y +N++ V+ +ALI+MY KCG I +A Q+F+ +
Sbjct: 239 LVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLP 298
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+R+VV+WST+I GLA HG+A + F +M+R V P+D+T+IGLLSAC+H G NEG
Sbjct: 299 KRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRW 358
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
+FD M R +E +IEHYGC+VDLLGRAG L+++ +I MP+KPD IW +LL +C+ +
Sbjct: 359 FFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMH 418
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK--SMKKTPGC 489
N+E+ EHL+ L P D+G+YV LSNIYA G WE V+++R +++ S + P
Sbjct: 419 GNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVSARWHPED 478
Query: 490 SLIEVNNEVQEFVSGDDTK 508
+ ++ E EF +T+
Sbjct: 479 ACXDMLEEAPEFHQTKETR 497
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/501 (39%), Positives = 304/501 (60%), Gaps = 7/501 (1%)
Query: 45 SNFLVTK-MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM 103
SN V K I + + G + YA +F V +N ++ Y Y + L+ +M
Sbjct: 169 SNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEM 228
Query: 104 LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL-KSHSITENALLDLY 162
+ + P+ TL ++ +C+ L GK I+ K G+ + + I ENAL+D++
Sbjct: 229 ---EKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMF 285
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
C E+ A VF+EM RD+++W ++++G+A ++ AR FD+MP VSWTAMI
Sbjct: 286 ASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMID 345
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
GY + + E L +FR MQM ++PDE ++VS+L ACA LG+LELGEW Y DKN +
Sbjct: 346 GYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKN 405
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
T I NALI+MY KCG + +A ++F++M ++D +W+ +I GLAN+G +A+ +F M
Sbjct: 406 DTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYML 465
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
V P++IT+IG++ AC H G +G +F +M H I+ + HYGC+VDLLGRAG L
Sbjct: 466 EASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHL 525
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIY 462
+AL +I MP+KP++ +WGSLL +CR + N+++A +A +L LEPE+ YVLL NIY
Sbjct: 526 KEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIY 585
Query: 463 AKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
A +W+++ +RK++ + +KK PGCSL+E+N V EFV+GD + P K+I+ LE +
Sbjct: 586 AACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMK 645
Query: 523 LHQDRAKDVIDI--MYEDIGE 541
A D ++ D+GE
Sbjct: 646 QDLSNAGYSPDTSEVFLDVGE 666
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 219/468 (46%), Gaps = 81/468 (17%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +L++C + E+ +IH+Q +K LS ++ +TK+I C GD+ YA +F ++ +P
Sbjct: 39 ISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQP 98
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+VF++N MI+ Y+ + ++LYK ML I PD FT PF++K +
Sbjct: 99 SVFIWNTMIKGYSRINCSESGVSLYKLMLVHN-----IKPDGFTFPFLLKGFTKDMALKY 153
Query: 136 GKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK + H G L S+ + + L+ C + A K+F+ ++V WN ++SGY
Sbjct: 154 GKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYN 213
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
R + ++++ LF +M + + + P+ +++V
Sbjct: 214 RFKRYEESKRLFIEM-----------------------------EKKCECVSPNSVTLVL 244
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALIEMYIKCGCINQASQLFDQMVER 313
+L AC++L L G+ I+ K ++ +I NALI+M+ CG ++ A +FD+M R
Sbjct: 245 MLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTR 304
Query: 314 DVVSWSTVIGGLANH-------------------------------GKAHKAIHLFHEMQ 342
DV+SW++++ G AN + + + LF +MQ
Sbjct: 305 DVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQ 364
Query: 343 RLKVPPNDITFIGLLSACAHTGF-----WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
V P++ T + +L+ACAH G W + + + +K D I + L+D+
Sbjct: 365 MSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGN------ALIDMYF 418
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+ G +++A I EM K D W +++ + E A+ ++L
Sbjct: 419 KCGNVEKAKKIFNEM-QKKDKFTWTAMIVGLANNGHGEEALTMFSYML 465
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/537 (37%), Positives = 319/537 (59%), Gaps = 18/537 (3%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+D ++ + ++ L +IH +L+ L L K+ S G L ++ LF +
Sbjct: 23 KDNLALLIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTP 82
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
PNVFL+ +I A+ + L+ A++ Y QML P I P+ FTL ++K+C L P
Sbjct: 83 NPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHP-----IQPNAFTLSSLLKACT--LHP 135
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ + +H+H KFGL SH L+D Y + ++ A K+F+ M +R +V++ +++ Y
Sbjct: 136 A--RAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCY 193
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-------IE 246
A+ G + +AR+LF+ M +V W MI GY G EAL FR+M M+ +
Sbjct: 194 AKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVR 253
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
P+EI++V+VL +C Q+G+LE G+W+H Y + N + + AL++MY KCG + A ++
Sbjct: 254 PNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKV 313
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
FD M +DVV+W+++I G HG + +A+ LFHEM + V P+DITF+ +L+ACAH G
Sbjct: 314 FDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLV 373
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
++G FDSMK + +E K+EHYGC+V+LLGRAGR+ +A +++ M ++PD +WG+LL
Sbjct: 374 SKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLW 433
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+CR +SN+ + E L+ +G YVLLSN+YA W V+++R +++ ++K
Sbjct: 434 ACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKE 493
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA--LHQDRAKDVIDIMYEDIGE 541
PGCS IEV N V EFV+GD P KDI+ +LE + L + D + DIGE
Sbjct: 494 PGCSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGE 550
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 313/530 (59%), Gaps = 13/530 (2%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
+R ++ + + L +IH + ++ L L K+ S G L Y+ LF + +
Sbjct: 31 NRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQN 90
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP- 133
P+VF + A+I + L+ A+N Y QML + P+ FT ++K LCP
Sbjct: 91 PSVFFWTAIIHGHALRGLHEQALNFYAQMLTQG-----VEPNAFTFSSILK-----LCPI 140
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK +H+ K G S LLD+Y + +++ A ++F+ M ++ +V+ +++ Y
Sbjct: 141 EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCY 200
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G++ AR+LFD M V W MI GYT G EAL +FR+M +P+E++++
Sbjct: 201 AKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVL 260
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL AC QLG+LE G W+H Y + N + + AL++MY KCG + A +FD++ ++
Sbjct: 261 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 320
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DVV+W+++I G A HG + +A+ LF M R+ + P +ITFIG+LSAC H+G+ EG F
Sbjct: 321 DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIF 380
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ MK ++ IE KIEHYGC+V+LLGRAG ++QA +++ M ++PD +WG+LL +CR +
Sbjct: 381 NKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK 440
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+ + +E L+ ++G Y+LLSNIYA G W+ V+R+R +++ +KK PGCS IE
Sbjct: 441 IALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIE 500
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLA--LHQDRAKDVIDIMYEDIGE 541
VNN+V EF++G P K+I+ +LE + L DI+ DIGE
Sbjct: 501 VNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGE 550
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/508 (38%), Positives = 313/508 (61%), Gaps = 17/508 (3%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
+C+ + +LK+IHTQI+ SQ NFL+ K++ + G+L A +F++++ P+ ++N
Sbjct: 43 TCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQ 102
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
MIR ++ + + LY +M+ P++FT F+I CA G+Q+H
Sbjct: 103 MIRGHSQSETPHKLVELYNRMVEAEAE-----PNEFTYSFLIGGCARSXLLREGEQVHGR 157
Query: 143 VCKFGLKSHSITENALLDLY---GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
V G ++ +L++LY G D + +A +VF+E+ DR+IV+WN+L++GY R G +
Sbjct: 158 VVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDV 217
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
AR +FD+MP +VSWT MI+G IG +AL +F +M+ G++ D++++V+ L AC
Sbjct: 218 DGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSAC 277
Query: 260 AQLGSLELGEWIHMYCDKN-HLLRRTVIC---NALIEMYIKCGCINQASQLFDQMVERDV 315
A+LG L+LG WIH Y D+ H + ++ N+LI MY CG I++A ++F M +R
Sbjct: 278 AELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRST 337
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP---PNDITFIGLLSACAHTGFWNEGLMY 372
+SW+++I G A G A +A+ +F MQRL P+ ITFIG+L AC+H GF ++G +
Sbjct: 338 ISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHF 397
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F+ M + I +IEHYGC+VDLL RAG LD+A + E MPMKP+ +WG+LL CR +
Sbjct: 398 FECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHK 457
Query: 433 NLEIAV-IAMEHLLVLEPEDTGNY-VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
N E+A +A + +L L+P+ Y VLLSN+YA RW+DV+ +R+ + ++K G S
Sbjct: 458 NAELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRS 517
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+++N V +FV+GD T ++ +L
Sbjct: 518 WVQINGVVHDFVAGDWTHKHASSVYEML 545
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/502 (38%), Positives = 308/502 (61%), Gaps = 8/502 (1%)
Query: 17 FVPILQS---CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F P+L++ ++L+E +IH K F+ T ++ + + G +A A L+F ++
Sbjct: 125 FPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMF 184
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V ++ MI Y + L+ A+ L+++M + PD+ L V+ +C
Sbjct: 185 HRDVVTWSIMIDGYCQSGLFNDALLLFEEM-----KNYNVEPDEMMLSTVLSACGRAGNL 239
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S GK IH + + + ++AL+ +Y C + A +FE+MT +++VA +++GY
Sbjct: 240 SYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGY 299
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
++LGQ++ AR +F++M +V W+AMISGY S EAL++F +MQ +GI+PD+++++
Sbjct: 300 SKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTML 359
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV+ ACA LG+L+ +WIH++ DKN I NALIEMY KCG + +A ++FD+M +
Sbjct: 360 SVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRK 419
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+V+SW+ +I A HG A A+ FH+M+ + PN ITF+G+L AC+H G EG F
Sbjct: 420 NVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIF 479
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM +H+I K HYGC+VDL GRA L +AL ++E MP+ P+ IWGSL+++CR +
Sbjct: 480 YSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGE 539
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+ A + LL L+P+ G +V LSNIYAK RWEDV ++RKL++ K + K GCS E
Sbjct: 540 IELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFE 599
Query: 494 VNNEVQEFVSGDDTKPFLKDIF 515
+NNE+ EF+ D + +I+
Sbjct: 600 LNNEIHEFLVADRSHKHADEIY 621
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 207/445 (46%), Gaps = 82/445 (18%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKM-IDVCNSGGDLAYASLLFKQVKEPNVFL 79
L S +L LK++H QIL+ L +S L+ K+ I C L YA +F + +P L
Sbjct: 30 LSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHL 89
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
N +R + + + +Y++M RT L + D+F+ P ++K+ + + G +I
Sbjct: 90 CNRFLRELSRSEEPEKTLLVYERM----RTQGLAV-DRFSFPPLLKALSRVKSLVEGLEI 144
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H K G S + L+ +Y C + EA +F++M RD+V W+ +I GY + G
Sbjct: 145 HGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSG-- 202
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
LF+ +AL +F +M+ +EPDE+ + +VL AC
Sbjct: 203 -----LFN------------------------DALLLFEEMKNYNVEPDEMMLSTVLSAC 233
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC-------------------- 299
+ G+L G+ IH + +N+++ + +AL+ MY CG
Sbjct: 234 GRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVAST 293
Query: 300 -----------INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
I A +F+QMV++D+V WS +I G A +A++LF+EMQ L + P
Sbjct: 294 AMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKP 353
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG------CLVDLLGRAGRL 402
+ +T + +++ACAH G D K H K G L+++ + G L
Sbjct: 354 DQVTMLSVITACAHLG-------ALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSL 406
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSS 427
++A I ++MP K + W ++S+
Sbjct: 407 ERARRIFDKMPRK-NVISWTCMISA 430
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/533 (38%), Positives = 315/533 (59%), Gaps = 42/533 (7%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG---GDLAYASLLFKQVKEPNVF 78
+S +L LK++H L+ Q +++ ++ C + +L +A +F+ V PNVF
Sbjct: 38 KSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVK-CYANPHFSNLNFALKVFEYVPNPNVF 96
Query: 79 LYNAMIRAYTNNHLYGLAIN-LYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++N +I+ N+ AI YK M+ R P+KFT P + K+C G
Sbjct: 97 VFNIIIKGCLQNNEPCKAICCYYKMMIAHAR------PNKFTYPTLFKACTAAEAAEEGV 150
Query: 138 QIHAHVCKFGL-------------------------------KSHSITENALLDLYGKCD 166
Q+HAHV K GL S I NA++D Y KC
Sbjct: 151 QVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCG 210
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
E+ A ++F M D+++ +WN ++SG A+ G +++AR LF++M +SW+AMI GY
Sbjct: 211 EVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIK 270
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
G Y EAL+VF MQ I P + + SVL ACA LG+L+ G WIH Y + N V+
Sbjct: 271 GGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVL 330
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
AL++MY KCG ++ A +F++M +++V +W+ +I GL HG+A AI LF +MQ+ K
Sbjct: 331 GTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKF 390
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
PN IT +G+LSACAH+G +EGL F+SM+ + IE +EHYGC+VDLLGRAG L +A
Sbjct: 391 RPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAE 450
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
++ MPM+P A +WG+LL +CR + ++E+ + LL LEP+++G Y LLSNIYA+ G
Sbjct: 451 EVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAG 510
Query: 467 RWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
RW+DV+ +RKL++ + +K + G S+I+ + V EF GD + P +K+I+ +L+
Sbjct: 511 RWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLK 563
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/520 (37%), Positives = 294/520 (56%), Gaps = 68/520 (13%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A +F Q+ EPN ++NAM R Y+ N + I L++QM G ++P+ FT P ++
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQM-----KGLDVMPNCFTFPVIL 58
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK-------------------- 164
KSC + G+++H V K G +++ L+D+Y
Sbjct: 59 KSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVI 118
Query: 165 -----------CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP--- 210
C +L+ A ++F+ +RDIV WN +ISGY + +AR LFDKMP
Sbjct: 119 AWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKD 178
Query: 211 ----------YTT------------------IVSWTAMISGYTHIGSYAEALDVFRQMQM 242
Y + + SW A+I GYT G ++E L F++M +
Sbjct: 179 VMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLV 238
Query: 243 VG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
G + P++ ++V+VL ACA+LG+L+LG+W+H+Y + + + NAL++MY KCG +
Sbjct: 239 DGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVE 298
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
A +F M +D++SW+T+IGGLA HG A++LF M+ P+ ITFIG+L AC
Sbjct: 299 TALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACT 358
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G +G YF SM D+ I +IEHYGC+VDLLGRAG L A++ I +MP++ DA IW
Sbjct: 359 HMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIW 418
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
+LL +CR Y N+E+A +A+E L+ EP++ NYV+LSNIY GRW+DV+R++ +R
Sbjct: 419 AALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDT 478
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
KK PGCSLIEVN+ + EF S D+ P + I+ L L
Sbjct: 479 GFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTL 518
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 143/313 (45%), Gaps = 38/313 (12%)
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
S GD+ LF+++ E NVF +NA+I YT N + ++ +K+ML D ++P+
Sbjct: 191 SNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVD----GTVVPND 246
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
TL V+ +CA L LGK +H + G K + NAL+D+Y KC + A VF+
Sbjct: 247 ATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKS 306
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M ++D+++WN +I G A H G A+AL++F
Sbjct: 307 MDNKDLISWNTIIGGLA------------------------------VH-GHGADALNLF 335
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIK 296
M++ G PD I+ + +L AC +G +E G + D ++ R ++++ +
Sbjct: 336 SHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGR 395
Query: 297 CGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
G + A +M +E D V W+ ++G + A ++ + P N ++
Sbjct: 396 AGLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVELAELALEKLIEFE-PKNPANYVM 454
Query: 356 LLSACAHTGFWNE 368
L + G W +
Sbjct: 455 LSNIYGDFGRWKD 467
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 73/126 (57%)
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
M+ A +FD++P W AM GY+ S+ + + +FRQM+ + + P+ + +L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
C ++ +L+ GE +H + K+ + LI+MY G I+ A ++F +M+ER+V++W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 319 STVIGG 324
+ +I G
Sbjct: 121 TAMING 126
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 87/213 (40%), Gaps = 23/213 (10%)
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ A ++FDQ+ E + W+ + G + + I LF +M+ L V PN TF +L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 360 CAHTGFWNEG-----LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM 414
C EG + + + + L+D+ G + A + EM +
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATT------LIDMYASGGAIHAAYRVFGEM-I 113
Query: 415 KPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRM 474
+ + W ++++ T +L + L L PE + VL + + + + +DV R
Sbjct: 114 ERNVIAWTAMINGYITCCDL----VTARRLFDLAPER--DIVLWNTMISGYIEAKDVIRA 167
Query: 475 RKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
R+L K P ++ N + + S D
Sbjct: 168 REL-----FDKMPNKDVMSWNTVLNGYASNGDV 195
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/432 (43%), Positives = 273/432 (63%), Gaps = 6/432 (1%)
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
D FT PFV+KS LL +GK +H + + GL+ +L+ LYGKC E+ +A KVF
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
+ MT RD+ +WN L++GY + G + A +F++MP+ IVSWT MISGY+ G +AL
Sbjct: 193 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 252
Query: 236 VFRQM--QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
+F +M + G+ P+ ++I+SVLPACAQL +LE G IH + L + AL M
Sbjct: 253 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 312
Query: 294 YIKCGCINQASQLFDQMV--ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
Y KCG + A FD++ E+++++W+T+I A++G +A+ F EM + + P+DI
Sbjct: 313 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 372
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
TF GLLS C+H+G + GL YF+ M + I ++EHY C+ DLLGRAGRL +A ++ E
Sbjct: 373 TFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGE 432
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MPM IWGSLL++CR + NLE+A A L VLEPE+TGNYVLLSN+YA+ GRW++V
Sbjct: 433 MPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEV 492
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
++R +++S+ KK+PGCS IE+N + F+ GD + P K+I+ LE L A
Sbjct: 493 DKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYF 552
Query: 532 IDIMY--EDIGE 541
D Y DI E
Sbjct: 553 PDTSYVLHDISE 564
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 55/321 (17%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G + A +F+++ N+ + MI Y+ + L A++L+ +M+++ S + P+ T
Sbjct: 214 GCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKE---DSGVRPNWVT 270
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM- 178
+ V+ +CA L G+QIH C+ GL S++ AL +Y KC L++A F+++
Sbjct: 271 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 330
Query: 179 -TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
+++++AWN +I+ YA G +A F
Sbjct: 331 RNEKNLIAWNTMITAYASYGHGLQAVSTF------------------------------- 359
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI-- 295
R+M GI+PD+I+ +L C+ G +++G + + NH + T N +E Y
Sbjct: 360 REMIQAGIQPDDITFTGLLSGCSHSGLVDVG--LKYF---NH-MSTTYSINPRVEHYACV 413
Query: 296 -----KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR---LKVP 347
+ G + +AS+L +M + + ++ G L + H+ + + R + P
Sbjct: 414 ADLLGRAGRLAEASKLVGEM---PMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEP 470
Query: 348 PNDITFIGLLSACAHTGFWNE 368
N ++ L + A G W E
Sbjct: 471 ENTGNYVLLSNMYAEAGRWQE 491
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/571 (36%), Positives = 313/571 (54%), Gaps = 80/571 (14%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVF 78
L+ C + +LK+IH Q+L+ L F +K++ C + G L YA L+F Q+ P F
Sbjct: 47 LEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTF 106
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
N++IR YTN +L AI Y+ M+ + PD+FT P + KSC G+LC GKQ
Sbjct: 107 TCNSIIRGYTNKNLPRQAILFYQLMMLQG-----LDPDRFTFPSLFKSC-GVLCE--GKQ 158
Query: 139 IHAHVCKFGLKSHSITENA-------------------------------LLDLYGKCDE 167
+H H K G S + +N ++ Y + D
Sbjct: 159 LHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDL 218
Query: 168 LIEAHKVFEEMT--------------------DRDI-------------------VAWNN 188
EA K+F M RD+ V +
Sbjct: 219 PHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSA 278
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L+ Y + G AR LF+KMP + W MI+G+ Y EAL +F +MQ+ G++ D
Sbjct: 279 LMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGD 338
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++++ S+L AC LG+LELG+W+H+Y +K + + AL++MY KCG I A ++F
Sbjct: 339 KVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQ 398
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M E+DV++W+ +I GLA G+ KA+ LFHEMQ +V P+ ITF+G+L+AC+H G NE
Sbjct: 399 EMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNE 458
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G+ YF+SM + I+ IEHYGC+VD+LGRAGR+ +A ++I+ MPM PD + LLS+C
Sbjct: 459 GIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSAC 518
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R + NL +A A + L+ L+P++ G YVLLSNIY+ WE +MR+L+ +++KK PG
Sbjct: 519 RIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPG 578
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
CS IEV V EFV GD + P +I+ L+
Sbjct: 579 CSAIEVGGVVHEFVKGDVSHPQSSEIYETLD 609
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 152/365 (41%), Gaps = 82/365 (22%)
Query: 4 RIGALSIKELEDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
R+ S+K E V +L +C +L K++H I + + L + ++DV G
Sbjct: 228 RMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCG 287
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
A LF ++ E N+F +N MI + + Y A++L+ +M G DK T+
Sbjct: 288 CYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKG-----DKVTM 342
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
++ +C L LGK +H ++ K ++ AL+D+Y KC + A +VF+EM +
Sbjct: 343 ASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE 402
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
+D++ W LI G A GQ K AL++F +M
Sbjct: 403 KDVMTWTALIVGLAMCGQGLK-------------------------------ALELFHEM 431
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
QM ++PD I+ V VL AC+ G +
Sbjct: 432 QMSEVKPDAITFVGVLAACSH-----------------------------------AGLV 456
Query: 301 NQASQLFDQM-----VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
N+ F+ M ++ + + ++ L G+ +A L +Q + + P+ +G
Sbjct: 457 NEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDL---IQNMPMAPDYFVLVG 513
Query: 356 LLSAC 360
LLSAC
Sbjct: 514 LLSAC 518
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/504 (37%), Positives = 306/504 (60%), Gaps = 8/504 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS-GGDLAYASLLFKQVKEPNVF 78
+L SC++ ++K++H +++ L K++ +S ++YA ++F +P++F
Sbjct: 7 LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLF 66
Query: 79 LYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
LYN +I+ + + ++ ++R+ R ++P++++ F K C + G+
Sbjct: 67 LYNTIIKVLAFSTTSSADSFTKFRSLIREER----LVPNQYSFAFAFKGCGSGVGVLEGE 122
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
Q+ H K GL+++ NAL+ +Y D +++A KVF+ +RD+ +WN ++SGYARLG
Sbjct: 123 QVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLG 182
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+M +AR LFD+MP +VSWT MISG +G + EALD+F M G+ P+E ++ S L
Sbjct: 183 KMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLA 242
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ--MVERDV 315
ACA L +L+ G W+H+Y KN++ + LI+MY KCG + AS+LF+ ++R V
Sbjct: 243 ACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKV 302
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
W+ +IGG A HGK+ +AI +F +M+ KV PN +TF+ LL+AC+H EG YF+S
Sbjct: 303 WPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFES 362
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M + ++ ++EHYGCLVDLLGRAGRL +A II M + PD IWG+LLS+C+ + + E
Sbjct: 363 MASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAE 422
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ + + L+P G +VLL+NIY+ G W + +R+ I KKTPGCS IE+N
Sbjct: 423 MGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELN 482
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLE 519
+F+ GD + P K ++ L+
Sbjct: 483 GMFHQFLVGDRSHPQTKQLYLFLD 506
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/505 (38%), Positives = 311/505 (61%), Gaps = 18/505 (3%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F+ +LQ+C++ ++ I+ +I++ Q F+V +++ VC++ + YAS +F + PN
Sbjct: 35 FISLLQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPN 94
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V+LY A+I + Y I+LY QM+ S ++PD + + V+K+C L G
Sbjct: 95 VYLYTALIDGLVLSCYYTDGIHLYYQMI-----NSSLVPDSYAVTSVLKACGCHLALKEG 149
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+++H+ V K GL S+ L++LYGKC +A +VF+EM +RD+VA +I+ Y
Sbjct: 150 REVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYY--- 206
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
FD T V WTAMI G G AL+VFR MQ + P+E++IV VL
Sbjct: 207 ---------FDHGIKDT-VCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVL 256
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC++LG+L+LG W+ Y DK+ + + ALI MY +CG I++A ++F+QM E++V+
Sbjct: 257 SACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVI 316
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+++++I G A HGK+ +A+ LF + + P+ +TF+G+L+AC+H G G F SM
Sbjct: 317 TYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSM 376
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+D+ IE +IEHYGC+VDLLGR GRL++A + I M + PD + G+LLS+C+ + NLE+
Sbjct: 377 AKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLEL 436
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A + L+ + D+G Y+LLSN Y+ G+W++ + +R +R + ++K PGCS IEVNN
Sbjct: 437 AERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNN 496
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELL 521
E+ EF+ GD P + I+ LE L
Sbjct: 497 EIHEFLLGDLRHPQKEKIYKKLEEL 521
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/500 (39%), Positives = 303/500 (60%), Gaps = 10/500 (2%)
Query: 20 ILQSCENLIELKKIHTQILKYLL----SQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
+ ++C L L ++ ++IL ++L F+ +I + S GDL A +F +
Sbjct: 113 LFKACARL-SLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVR 171
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
++ +N+MI Y A+N Y++M + I PD+ T+ V+ SCA L L
Sbjct: 172 DLVSWNSMINGYVRRGWAYEALNFYREMKVEG-----IKPDEVTMIGVVSSCAQLEDLDL 226
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G++ H ++ + GLK NAL+D+Y KC L A K+F+ MT++ +V+W ++ GYA+
Sbjct: 227 GRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQ 286
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + A LFD+MP +V W AMI GY H EAL +F +MQ + I PDE+++VS
Sbjct: 287 SGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSC 346
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L AC+QLG+L++G WIH Y +K+ L + ALI+MY KCG I +A Q+F ++ R+
Sbjct: 347 LSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNS 406
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
++W+ +I GLA HG AH AI F EM V P+++TF+GLLSAC H G EG YF
Sbjct: 407 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 466
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M ++ K++HY C+VDLLGRAG L++A +I+ MP++ DA +WG+L +CR + N+
Sbjct: 467 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 526
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ A LL ++P D+G YVLL+N+Y + W++ + RKL+R + ++KTPGCS IEVN
Sbjct: 527 MGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVN 586
Query: 496 NEVQEFVSGDDTKPFLKDIF 515
V EF+ D + P + I+
Sbjct: 587 GIVYEFIVRDKSHPQSEQIY 606
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 236/467 (50%), Gaps = 70/467 (14%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLF 69
+L + F+ +L+ C+++ +LK+I +Q++ L + F +++I C + DL Y + +
Sbjct: 4 QLINPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNIL 63
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ PN F +N IR + ++ A+ LYK++L+ T PD +T P + K+CA
Sbjct: 64 FNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTK----PDNYTYPLLFKACAR 119
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L +G +I HV G S NA++ L C +L A K+F++ RD+V+WN++
Sbjct: 120 LSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSM 179
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
I+GY R G W EAL+ +R+M++ GI+PDE
Sbjct: 180 INGYVRRG-------------------WA------------YEALNFYREMKVEGIKPDE 208
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++++ V+ +CAQL L+LG H Y ++N L + NAL++MY+KCG + A +LFD
Sbjct: 209 VTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDS 268
Query: 310 MV-------------------------------ERDVVSWSTVIGGLANHGKAHKAIHLF 338
M ++DVV W+ +IGG + + +A+ LF
Sbjct: 269 MTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALF 328
Query: 339 HEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
+EMQ + + P+++T + LSAC+ G + G+ +++ H + + L+D+ +
Sbjct: 329 NEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTALIDMYAK 387
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
G++ +A+ + +E+P + ++ W +++S + N A+ ++
Sbjct: 388 CGKITKAIQVFQELPGR-NSLTWTAIISGLALHGNAHGAIAYFSEMI 433
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/496 (38%), Positives = 296/496 (59%), Gaps = 12/496 (2%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPNVFLY 80
C ELK+IH ++LK L Q ++ +TK + C S L YA ++F P+ FL+
Sbjct: 53 CSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLW 112
Query: 81 NAMIRAYTNNHLYGLAINLYKQML--RDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
N MIR ++ + ++ LY++ML P + +T P ++K+C+ L Q
Sbjct: 113 NLMIRGFSCSDEPERSLLLYQRMLCCSAPH-------NAYTFPSLLKACSNLSALEETTQ 165
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
IHA + K G ++ N+L++ Y AH +F+ + D V+WN++I GYA+ G+
Sbjct: 166 IHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGK 225
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
M A LF KM +SWT MISGY G + EAL +F +MQ +EPD +S+ + L A
Sbjct: 226 MDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSA 285
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CAQLG+LE G+WIH Y K + +V+ LI+MY KCG + +A ++F + + V +W
Sbjct: 286 CAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAW 345
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ +I G A HG +AI F EMQ++ + PN ITF +L+AC++TG EG + F +M+R
Sbjct: 346 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMER 405
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
D++++ IEHYGC+VDLL RAG LD+A I+EMP+KP+A IWG+LL +CR + N+E+
Sbjct: 406 DYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 465
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
E L+ ++P G YV +NI+A +W+ + R+L++ + + K PGCS I +
Sbjct: 466 EIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTT 525
Query: 499 QEFVSGDDTKPFLKDI 514
EF++GD + P ++ I
Sbjct: 526 HEFLAGDRSHPEIEKI 541
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/497 (39%), Positives = 302/497 (60%), Gaps = 9/497 (1%)
Query: 26 NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
N+ E K ++ ++ + + SN MI + G++ A LF ++K+ ++ ++A+I
Sbjct: 207 NVEEAKDVYDRMPERNVIASN----SMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALIS 262
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
Y N +Y A+ L+K+M + I+ D+ + V+ +C+ LL GK +H V K
Sbjct: 263 CYEQNEMYEEALILFKEM-----NANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVK 317
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
G++++ +NAL+ +Y C+E++ A K+F E D ++WN++ISGY + G+++KAR L
Sbjct: 318 VGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARAL 377
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
FD MP VSW+AMISGY + E L +F++MQ+ G +PDE +VSV+ AC L +L
Sbjct: 378 FDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAAL 437
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+ G+WIH Y KN L ++ LI MY+K GC+ A ++F + E+ V +W+ +I GL
Sbjct: 438 DQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGL 497
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A +G K++ F EM+ V PN+ITF+ +L AC H G +EG +F+SM ++H I
Sbjct: 498 AMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPN 557
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
I+HYGC+VDLLGRAG L +A +IE MPM PD WG+LL +C+ Y + E L+
Sbjct: 558 IKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLV 617
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
L P+ G VLLSNIYA G W DV +R ++R + KTPGCS+IE + V EF++GD
Sbjct: 618 ELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGD 677
Query: 506 DTKPFLKDIFWLLELLA 522
T P + I +L+ +A
Sbjct: 678 KTHPQNEHIEHMLDEMA 694
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 226/472 (47%), Gaps = 77/472 (16%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL-----LFKQVKEP 75
LQ C+N+ + +I +Q++ + +F ++++ +L + ++ +F ++ P
Sbjct: 33 LQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFST---ELPFININQSYQIFSHIENP 89
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
N F+ N M++ Y + AI +YK ML S + D +T P + +SC+ L
Sbjct: 90 NGFICNTMMKGYMQRNSPCKAIWVYKFMLE-----SNVAADNYTYPILFQSCSIRLAEFD 144
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
GK I HV K G S +N L+++Y C L +A KVF+ + D+V+WN++++GY
Sbjct: 145 GKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVL 204
Query: 196 LGQMKKARMLFDKMPYTTI-------------------------------VSWTAMISGY 224
+G +++A+ ++D+MP + VSW+A+IS Y
Sbjct: 205 VGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCY 264
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH---------MYC 275
Y EAL +F++M GI DE+ ++SVL AC++L + G+ +H Y
Sbjct: 265 EQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYV 324
Query: 276 D-KNHLLRRTVIC---------------------NALIEMYIKCGCINQASQLFDQMVER 313
+ +N L+ C N++I Y+KCG I +A LFD M ++
Sbjct: 325 NLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDK 384
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D VSWS +I G A + + + LF EMQ P++ + ++SAC H ++G +
Sbjct: 385 DNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQG-KWI 443
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ R + ++ I L+++ + G ++ AL + + + K W +L+
Sbjct: 444 HAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEK-GVSTWNALI 494
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 178/401 (44%), Gaps = 48/401 (11%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
+ ++G + L++ + + SCE ++ +K+ ++ L Q ++ MI G
Sbjct: 314 LVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSE--SCCLDQISW--NSMISGYVKCG 369
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
++ A LF + + + ++AMI Y + + L+++M + PD+ L
Sbjct: 370 EIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTK-----PDETIL 424
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
VI +C L GK IHA++ K GLK + I L+++Y K + +A +VF+ + +
Sbjct: 425 VSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEE 484
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
+ + WN LI G A G L DK +L F +M
Sbjct: 485 KGVSTWNALILGLAMNG-------LVDK------------------------SLKTFSEM 513
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGC 299
+ G+ P+EI+ V+VL AC +G ++ G + H + + ++++ + G
Sbjct: 514 KEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGM 573
Query: 300 INQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ +A +L + M + DV +W ++G +G + ++ L P +D + L +
Sbjct: 574 LKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELH-PDHDGFNVLLSN 632
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC-LVDLLGR 398
A G W + ++ M R H + ++ GC +++ GR
Sbjct: 633 IYASKGNWVD-VLEVRGMMRQHGV---VKTPGCSMIEAHGR 669
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/539 (35%), Positives = 305/539 (56%), Gaps = 42/539 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L + ++ L+ +H++I+ L ++ L K++ S D+A A +F ++ E NV +
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
N MIR+Y NN YG + ++ M G + PD +T P V+K+C+ +G++I
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMC-----GCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H K GL S N L+ +YGKC L EA V +EM+ RD+V+WN+L+ GYA+ +
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222
Query: 200 KKA-------------------------------------RMLFDKMPYTTIVSWTAMIS 222
A + +F KM ++VSW MI
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 282
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
Y EA++++ +M+ G EPD +SI SVLPAC +L LG+ IH Y ++ L+
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
++ NALI+MY KCGC+ +A +F+ M RDVVSW+ +I G+ A+ LF ++Q
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+ P+ I F+ L+AC+H G EG F M + I ++EH C+VDLLGRAG++
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIY 462
+A I++M M+P+ ++WG+LL +CR +S+ +I ++A + L L PE +G YVLLSNIY
Sbjct: 463 KEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIY 522
Query: 463 AKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
AK GRWE+V+ +R +++SK +KK PG S +EVN + F+ GD + P +I+ L++L
Sbjct: 523 AKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVL 581
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/519 (37%), Positives = 310/519 (59%), Gaps = 15/519 (2%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS--GGDLAYASLLFKQVK 73
R + +L+ C+N+ LK+ H Q+ L + F +++++ C+ G L YA +F+++
Sbjct: 7 RCLVLLEKCKNVNHLKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGSLTYACRVFERIH 66
Query: 74 EPNVFLYNAMIRAY-TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
P + + N +I+ + N + YG +++ +ML + + PD +T+P+V+K+CA L
Sbjct: 67 HPTLCICNTIIKTFLVNGNFYG-TFHVFTKMLHNG-----LGPDNYTIPYVLKACAALRD 120
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
SLGK +H + K GL N+L+ +Y C ++I A VF+EM V+W+ +ISG
Sbjct: 121 CSLGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISG 180
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA++G + AR+ FD+ P W AMISGY + E L +FR +Q+ + PDE
Sbjct: 181 YAKVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIF 240
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
VS+L ACA LG+L++G WIH Y ++ + + +L++MY KCG + A +LFD M E
Sbjct: 241 VSILSACAHLGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPE 300
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
RD+V W+ +I GLA HG A+ +F EM++ + P+DITFI + +AC+++G +EGL
Sbjct: 301 RDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGLQL 360
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP-----DAKIWGSLLSS 427
D M + IE K EHYGCLVDLL RAG +A+ +I + + W + LS+
Sbjct: 361 LDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFLSA 420
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
C + ++A A + LL LE +G YVLLSN+YA G+ D R+R ++R+K + K P
Sbjct: 421 CCNHGQAQLAERAAKRLLRLE-NHSGVYVLLSNLYAASGKHSDARRVRNMMRNKGVDKAP 479
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQD 526
GCS +E++ V EF++G++T P +++I +LE+L + D
Sbjct: 480 GCSSVEIDGVVSEFIAGEETHPQMEEIHSVLEILHMQLD 518
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/501 (38%), Positives = 298/501 (59%), Gaps = 6/501 (1%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD-LAYASLLFKQVKE 74
+ + + C+ L LK++H QI+ + S + + LAYA +F ++
Sbjct: 69 QILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQN 128
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P LYN++IRA +++ A+ LY ML+ S + PD T PFVIK+C
Sbjct: 129 PPPSLYNSLIRALSSSKTPLEALPLYHTMLQ-----SGLKPDHMTYPFVIKACNESSVTW 183
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G +H HV K G + S ++L+ LY +L A ++F + RD+V+WN +I GY
Sbjct: 184 FGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYV 243
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+ +M ARM+FD+M ++SW MI+GY G EAL +F QM+ VG++P E ++VS
Sbjct: 244 KHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVS 303
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
+L ACA LG+L+ G +H Y + N + +++ AL++MY KCG I+ A+Q+F+ M +D
Sbjct: 304 LLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKD 363
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V++W+T+I G+A HG +A LF EM+ V PNDITF+ +LSAC+H G +EG D
Sbjct: 364 VLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLD 423
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
M + IE K+EHYGC++DLL RAG L++A+ +I MPM+P+ G+LL CR + N
Sbjct: 424 CMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNF 483
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E+ + + L+ L+P +G Y+LLSNIYA +W+D ++R L++ + K PG S+IE+
Sbjct: 484 ELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIEL 543
Query: 495 NNEVQEFVSGDDTKPFLKDIF 515
V FV+GD + P I+
Sbjct: 544 KGMVHRFVAGDWSHPESNKIY 564
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/512 (38%), Positives = 313/512 (61%), Gaps = 11/512 (2%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SGGDLAYASLLFKQVKEP 75
FV +L C L LK++H + + + S +++ + L YA LF P
Sbjct: 12 FVAVLSRCATLAHLKQLHGRSVVTARAASQSTTFQLLRFASLRLSCLPYARRLFDSTPHP 71
Query: 76 NVFLYNAMIRAYTNNHLYGL----AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
NVFLY+AM+ AY A+ L+ +MLR R P++F P V+++ A +
Sbjct: 72 NVFLYSAMLSAYAAASPAQAYGHDALALFLRMLRRGRPA----PNQFVYPLVLRA-ACAI 126
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
L + IH+H CK G ++ + +LLD Y + +++A K+F+ +T+R++++W L+S
Sbjct: 127 GVQLVRSIHSHACKSGFHAYDVIRTSLLDGYSRYGMMLDARKLFDGLTERNVISWTALVS 186
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GYAR G++ A +LFD+MP + +W AMI+G T G + EA+ + +M G + + +
Sbjct: 187 GYARAGKIGDAIVLFDRMPERDVAAWNAMITGCTQNGLFVEAVGICSRMVDEGFQLNGTT 246
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+ VL AC LG L++G+ +H Y ++ + + + N LI+MY KCG + +A +FD+
Sbjct: 247 VSCVLSACGHLGMLKIGKVVHGYAWRSCVGFGSSVVNGLIDMYGKCGNLKEARWMFDEFS 306
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+R + +W+++I LA HG + AI +F EM+ + P+ +TF+GLL+AC H GF +EGL
Sbjct: 307 DRSLTTWNSLINCLALHGHSKSAIAVFDEMRDEGIEPDVVTFVGLLNACTHGGFVDEGLT 366
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
YF M + IE +IEHYGC+VDLLGRAGR + A+N+I +M ++PD IWGSLL++CRT+
Sbjct: 367 YFKLMCDELRIEPEIEHYGCIVDLLGRAGRFEDAMNVINDMKVQPDEVIWGSLLNACRTH 426
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM-KKTPGCS 490
LE+A ++ LL L P + V+L+N+Y++ G WE+V+++RKL++ M KK PGCS
Sbjct: 427 RQLELAEFSVRKLLQLNPNNANYVVMLANLYSEGGSWEEVTKIRKLMKEDIMGKKLPGCS 486
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
IEV+ + F SGDD P +DI+ L+ LA
Sbjct: 487 WIEVDRKTHRFYSGDDAHPESEDIYDTLDELA 518
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/539 (35%), Positives = 305/539 (56%), Gaps = 42/539 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L + ++ L+ +H++I+ L ++ L K++ S D+A A +F ++ E NV +
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
N MIR+Y NN YG + ++ M G + PD +T P V+K+C+ +G++I
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTM-----CGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H K GL S N L+ +YGKC L EA V +EM+ RD+V+WN+L+ GYA+ +
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222
Query: 200 KKA-------------------------------------RMLFDKMPYTTIVSWTAMIS 222
A + +F KM ++VSW MI
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 282
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
Y EA++++ +M+ G EPD +SI SVLPAC +L LG+ IH Y ++ L+
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
++ NALI+MY KCGC+ +A +F+ M RDVVSW+ +I G+ A+ LF ++Q
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+ P+ I F+ L+AC+H G EG F M + I ++EH C+VDLLGRAG++
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIY 462
+A I++M M+P+ ++WG+LL +CR +S+ +I ++A + L L PE +G YVLLSNIY
Sbjct: 463 KEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIY 522
Query: 463 AKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
AK GRWE+V+ +R +++SK +KK PG S +EVN + F+ GD + P +I+ L++L
Sbjct: 523 AKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVL 581
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/496 (38%), Positives = 297/496 (59%), Gaps = 6/496 (1%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMI 84
E L K H ++K LL F++ +I G+L +F + +V +N+MI
Sbjct: 150 EELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMI 209
Query: 85 RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
A+ A+ L+++M + P+ T+ V+ +CA G+ +H+++
Sbjct: 210 TAFVQGGCPEEALELFQEM-----ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIE 264
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
+ + NA+LD+Y KC + +A ++F++M ++DIV+W ++ GYA++G+ A+
Sbjct: 265 RNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQG 324
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI-EPDEISIVSVLPACAQLG 263
+FD MP I +W A+IS Y G EAL++F ++Q+ +PDE+++VS L ACAQLG
Sbjct: 325 IFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLG 384
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
+++LG WIH+Y K + + +LI+MY KCG + +A +F + +DV WS +I
Sbjct: 385 AMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIA 444
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
GLA HG AI LF +MQ KV PN +TF +L AC+H G EG +F+ M+ + +
Sbjct: 445 GLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVL 504
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
++HY C+VD+LGRAG L++A+ +IE+MPM P A +WG+LL +C + N+ +A A
Sbjct: 505 PGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQ 564
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVS 503
L+ LEP + G YVLLSNIYAK G+W+ VS +RKL+R +KK PGCS IEV+ V EF+
Sbjct: 565 LIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLV 624
Query: 504 GDDTKPFLKDIFWLLE 519
GD++ P K I+ L+
Sbjct: 625 GDNSHPSAKKIYAKLD 640
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 227/481 (47%), Gaps = 83/481 (17%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
++ C +LK+IH Q+L+ L F +++I + L YA +F Q+ PN+
Sbjct: 41 LIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNL 100
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+ +N +IRAY ++ ++ ++ +ML S PDKFT PF+IK+ + L GK
Sbjct: 101 YTWNTLIRAYASSSNPHQSLLIFLRMLHQ----SPDFPDKFTFPFLIKAASELEELFTGK 156
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
H V K L S N+L+ Y KC EL ++VF + RD+V+WN++I
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMI------- 209
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
TA + G G EAL++F++M+ ++P+ I++V VL
Sbjct: 210 --------------------TAFVQG----GCPEEALELFQEMETQNVKPNGITMVGVLS 245
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACA+ E G W+H Y ++N + + NA+++MY KCG + A +LFD+M E+D+VS
Sbjct: 246 ACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVS 305
Query: 318 WSTVIGGLA-------------------------------NHGKAHKAIHLFHEMQRLKV 346
W+T++ G A GK +A+ LFHE+Q K
Sbjct: 306 WTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKT 365
Query: 347 P-PNDITFIGLLSACAHTGF-----WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
P+++T + LSACA G W + MK + H+ L+D+ + G
Sbjct: 366 AKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTS------LIDMYCKCG 419
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSN 460
L +AL + + K D +W ++++ + + + A+ + E + N V +N
Sbjct: 420 DLQKALMVFHSVERK-DVFVWSAMIAGLAMHGHGKDAIALFSKM--QEDKVKPNAVTFTN 476
Query: 461 I 461
I
Sbjct: 477 I 477
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 131/274 (47%), Gaps = 9/274 (3%)
Query: 159 LDLYGKCDELIEAHKVFEEMTDR----DIVAWNNLISGYA--RLGQMKKARMLFDKMPYT 212
L L +C E + ++ +M D + + LI+ A + A+ +FD++P+
Sbjct: 39 LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98
Query: 213 TIVSWTAMISGYTHIGSYAEALDVF-RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI 271
+ +W +I Y + ++L +F R + PD+ + ++ A ++L L G+
Sbjct: 99 NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H K L I N+LI Y KCG + ++F + RDVVSW+++I G
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
+A+ LF EM+ V PN IT +G+LSACA + G ++R+ I +
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERN-RIGESLTLSNA 277
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
++D+ + G ++ A + ++MP K D W ++L
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKMPEK-DIVSWTTML 310
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/511 (38%), Positives = 309/511 (60%), Gaps = 14/511 (2%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG--DLAYASLLFKQVKEPNVF 78
L +C NL + +I +Q++ F ++++ L Y+ +F +++ N F
Sbjct: 36 LHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGF 95
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
++N M+RAY ++ A+ LYK M+++ + PD +T P V+++CA L GK+
Sbjct: 96 MWNTMMRAYIQSNSAEKALLLYKLMVKNN-----VGPDNYTYPLVVQACAVRLLEFGGKE 150
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR--- 195
IH HV K G S +N L+++Y C + +A K+F+E D V+WN++++GY +
Sbjct: 151 IHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGD 210
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
+GQ+ +A LF++M +VSW+A+ISGY G Y EAL +F +M G+ DE+ +VSV
Sbjct: 211 MGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSV 270
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI----EMYIKCGCINQASQLFDQMV 311
L ACA L ++ G+ IH + + + NALI +MY+KCGC+ A ++F+ M
Sbjct: 271 LSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGME 330
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E+ V SW+ +I GLA +G +++ +F EM+ V PN+ITF+G+L AC H G +EG
Sbjct: 331 EKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRC 390
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
+F SM H IE ++HYGC+VDLLGRAG L++A +IE MPM PD WG+LL +C+ +
Sbjct: 391 HFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKH 450
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
+ E+ L+ L+P+ G +VLLSNI+A G WEDV +R +++ + + KTPGCSL
Sbjct: 451 GDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSL 510
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
IE N V EF++GD T P++ + +L +A
Sbjct: 511 IEANGVVHEFLAGDKTHPWINKVEGMLNEMA 541
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 300/507 (59%), Gaps = 4/507 (0%)
Query: 18 VPILQSCENLIELKKIHTQ-ILKYLLSQSNFLVTKMIDVC-NSGGDLAYASLLFKQVKEP 75
+ +L SC L E+K+IH Q ++K +L+ +F + + ++ +L YA+ L P
Sbjct: 13 ISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNP 72
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+F N+MIRAY+ + + + Y +L + PD +T F++++CA L
Sbjct: 73 TLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNN--LSPDNYTFTFLVRTCAQLQAHVT 130
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G +H V K G + + L+ +Y + L H VF+ + D+V +++ A+
Sbjct: 131 GLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAK 190
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + AR +FD+MP V+W AMI+GY G EALDVF MQM G++ +E+S+V V
Sbjct: 191 CGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLV 250
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L AC L L+ G W+H Y ++ + + AL++MY KCG +++A Q+F M ER+V
Sbjct: 251 LSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNV 310
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
+WS+ IGGLA +G +++ LF++M+R V PN ITFI +L C+ G EG +FDS
Sbjct: 311 YTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDS 370
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+ + I ++EHYG +VD+ GRAGRL +ALN I MPM+P W +LL +CR Y N E
Sbjct: 371 MRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKE 430
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ IA ++ LE ++ G YVLLSNIYA + WE VS +R+ +++K +KK PGCS+IEV+
Sbjct: 431 LGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVD 490
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELLA 522
EV EF+ GD + P +I LE ++
Sbjct: 491 GEVHEFIVGDKSHPRYDEIEMKLEEIS 517
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/499 (38%), Positives = 307/499 (61%), Gaps = 4/499 (0%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC-NSGGDLAYASLLFKQVKEPNVFLYNA 82
C + ELK+IH ++K L ++++ C S D+ YA L+F ++ N F++N
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+IR ++ + +AI+++ ML + + P + T P V K+ L G+Q+H
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPS---VKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V K GL+ S N +L +Y C LIEA ++F M D+VAWN++I G+A+ G + +A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
+ LFD+MP VSW +MISG+ G + +ALD+FR+MQ ++PD ++VS+L ACA L
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
G+ E G WIH Y +N +++ ALI+MY KCGCI + +F+ ++ + W+++I
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
GLAN+G +A+ LF E++R + P+ ++FIG+L+ACAH+G + +F MK + I
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
E I+HY +V++LG AG L++A +I+ MP++ D IW SLLS+CR N+E+A A +
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
L L+P++T YVLLSN YA +G +E+ R L++ + M+K GCS IEV+ EV EF+
Sbjct: 452 CLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFI 511
Query: 503 SGDDTKPFLKDIFWLLELL 521
S T P +I+ LL++L
Sbjct: 512 SCGGTHPKSAEIYSLLDIL 530
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/473 (40%), Positives = 291/473 (61%), Gaps = 7/473 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
++ H++IL LSQ++ L TK+I ++ L+F ++ NVFL+N++I Y N
Sbjct: 43 RQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKN 102
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
LY A L+ QM S +LPD FTL + K + L GK IH + G S
Sbjct: 103 RLYNEAFQLFNQM-----CSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVS 157
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
++ N+++ +Y KC E+ KVF+EMT R+ +WN LI+GYA G + R +FD+M
Sbjct: 158 DTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRMK 217
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV-GIEPDEISIVSVLPACAQLGSLELGE 269
+ SWTAMI+GY G EAL +FR MQ++ GIEP+ +S+VSVLPAC+ L G
Sbjct: 218 CRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGR 277
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF-DQMVERDVVSWSTVIGGLANH 328
IH + + L +CNALI+MY KCG ++ A ++F D + +D +SWS++I G H
Sbjct: 278 QIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLH 337
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
GK +AI L+ +M + + P+ IT +G+LSAC+ +G NEGL + S+ D+ IE +E
Sbjct: 338 GKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEI 397
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
+ C+VD+LGRAG+LD AL+ I+ MP++P +WG+L+S + +LE+ +A L+ LE
Sbjct: 398 FACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLE 457
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
PE+ NYV +SN+YA RW+ V+ +R++++ K ++K PGCS I +NN+ F
Sbjct: 458 PENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCF 510
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 156/344 (45%), Gaps = 66/344 (19%)
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
L +Q H+ + GL +S+ L+ Y C + VF+ + +++ WN+LI+GYA
Sbjct: 41 LTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYA 100
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
K R+ Y EA +F QM + PD+ ++ +
Sbjct: 101 ------KNRL-------------------------YNEAFQLFNQMCSSDVLPDDFTLST 129
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE-- 312
+ ++LG+L G+ IH + + TV+ N+++ MY KCG ++ ++FD+M
Sbjct: 130 LSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRN 189
Query: 313 -----------------------------RDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
R+V SW+ +I G +G + +A+ LF +MQ
Sbjct: 190 SGSWNVLIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQV 249
Query: 344 LK-VPPNDITFIGLLSACAH-TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+ + PN ++ + +L AC+ +G + ++ +++++ + +++ L+D+ + G
Sbjct: 250 IDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKE--LNNEVSLCNALIDMYSKCGS 307
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
LD A + E+ + DA W S++S + + A++ + +L
Sbjct: 308 LDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKML 351
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
SL+L H L + +++ LI Y C + +FD + ++V W+++I
Sbjct: 38 SLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
G A + ++A LF++M V P+D T L + G G R +
Sbjct: 98 GYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVS 157
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ ++ + + G +++ + +EM ++ ++ W L++ NL +
Sbjct: 158 DTVVA-NSIMSMYCKCGNFEESRKVFDEMTIR-NSGSWNVLIAGYAVSGNLVVG 209
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/517 (39%), Positives = 314/517 (60%), Gaps = 9/517 (1%)
Query: 17 FVPILQSCENLIELKKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
F+ +LQ+ + + E+K+IH L + LLS+ +L +I G A LF ++ +
Sbjct: 133 FLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDR 192
Query: 76 NVFLYNAMIRAYTN-NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
NV YN MI + ++ G+ ++ D R+ L PD FT+ ++ C L
Sbjct: 193 NVVSYNTMILGFAKVGNILGIL-----ELFHDMRSHGL-EPDDFTMLGLLLLCGQLGETK 246
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
LGK +HA + K S+ I NALLD+Y KC+EL A KVF+ ++D V+WN +I+GYA
Sbjct: 247 LGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYA 306
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
++G+++ A LF+++P IVSW ++ISGY G Y +F +M ++PD+++IV+
Sbjct: 307 KVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVN 366
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
++ A A++G+L+ G WIH K +ALI+MY KCG I +A +F+Q+ E+D
Sbjct: 367 LISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKD 426
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V +W+T+I G A HG +KA+ LF MQ + PND+TF+ +L+AC+H+G +EGL F
Sbjct: 427 VTTWTTMITGFAFHGFGNKALELFSVMQA-ETKPNDVTFVSVLAACSHSGLVDEGLKIFS 485
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
SMK+ + IE +EHYGCLVDLL R+GRL A+ +IE+MPM+P IWG++LS+CR + N+
Sbjct: 486 SMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNM 545
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E+A A+ LL LEPE G Y+LLSN+YA GRW +R+++ S+ +KK GCS + V
Sbjct: 546 ELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAV 605
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
+ V +F + + P DI +L L DV
Sbjct: 606 DGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADV 642
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 314/547 (57%), Gaps = 54/547 (9%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +L+ C+++ +LK+IH+ +K LS ++I C + G++ YA +F + P
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHP 70
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
++F++N MI+ Y+ +++Y ML S I PD+FT PF +K +
Sbjct: 71 SMFIWNTMIKGYSKISHPENGVSMYLLMLT-----SNIKPDRFTFPFSLKGFTRDMALQH 125
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
GK++ H K G S+ + A + ++ C + AHKVF+ ++V WN ++SGY R
Sbjct: 126 GKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNR 185
Query: 196 LGQMKKARML-------------------------------------------FDKMPYT 212
+ Q K ++ML FD M
Sbjct: 186 VKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTR 245
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
+VSWTAMI GY + + AL +FR+MQM ++PDE ++VS+L ACA LG+LELGEW+
Sbjct: 246 DVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVK 305
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
DKN + + NAL++MY KCG + +A ++F +M ++D +W+T+I GLA +G
Sbjct: 306 TCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGE 365
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+A+ +F M V P++IT+IG+L AC ++G +F +M H I+ + HYGC+
Sbjct: 366 EALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCM 421
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VDLLG G L++AL +I MP+KP++ +WGS L +CR + N+++A +A + +L LEPE+
Sbjct: 422 VDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPENG 481
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLK 512
YVLL NIYA +WE++ ++RKL+ + +KKTPGCSL+E+N V EFV+GD + P K
Sbjct: 482 AVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSK 541
Query: 513 DIFWLLE 519
+I+ LE
Sbjct: 542 EIYAKLE 548
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/517 (39%), Positives = 314/517 (60%), Gaps = 9/517 (1%)
Query: 17 FVPILQSCENLIELKKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
F+ +LQ+ + + E+K+IH L + LLS+ +L +I G A LF ++ +
Sbjct: 68 FLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDR 127
Query: 76 NVFLYNAMIRAYTN-NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
NV YN MI + ++ G+ ++ D R+ L PD FT+ ++ C L
Sbjct: 128 NVVSYNTMILGFAKVGNILGIL-----ELFHDMRSHGL-EPDDFTMLGLLLLCGQLGETK 181
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
LGK +HA + K S+ I NALLD+Y KC+EL A KVF+ ++D V+WN +I+GYA
Sbjct: 182 LGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYA 241
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
++G+++ A LF+++P IVSW ++ISGY G Y +F +M ++PD+++IV+
Sbjct: 242 KVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVN 301
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
++ A A++G+L+ G WIH K +ALI+MY KCG I +A +F+Q+ E+D
Sbjct: 302 LISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKD 361
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V +W+T+I G A HG +KA+ LF MQ + PND+TF+ +L+AC+H+G +EGL F
Sbjct: 362 VTTWTTMITGFAFHGFGNKALELFSVMQA-ETKPNDVTFVSVLAACSHSGLVDEGLKIFS 420
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
SMK+ + IE +EHYGCLVDLL R+GRL A+ +IE+MPM+P IWG++LS+CR + N+
Sbjct: 421 SMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNM 480
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E+A A+ LL LEPE G Y+LLSN+YA GRW +R+++ S+ +KK GCS + V
Sbjct: 481 ELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAV 540
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
+ V +F + + P DI +L L DV
Sbjct: 541 DGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADV 577
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/525 (38%), Positives = 315/525 (60%), Gaps = 39/525 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SG--GDLAYASLLFKQVKE 74
V +L C++L EL++IH Q++K L F V+++I C+ SG G L YAS +F +++
Sbjct: 10 VSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQH 69
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
PN F++ A+I+ +++ ++ LY +ML S + +F++P V+K+C LL
Sbjct: 70 PNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGV---EFSIPSVLKACGKLLAFD 126
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+Q+H V K L N+++ +Y E+ A +VF+ M +RD+V+WN++I+GY
Sbjct: 127 EGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 195 RLGQMKKARMLFDKMPYTTIVS-------------------------------WTAMISG 223
+ G+++ A LFD+MP +VS WT+MIS
Sbjct: 187 KAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISA 246
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL-LR 282
Y +ALD+FR+M +G+ PD +IVSVL A A LG +E G+W+H Y N + L
Sbjct: 247 YVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELS 306
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMV-ERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
I +ALI+MY KCG I A +F + R++ W+++I GLA HG A +A+ +F EM
Sbjct: 307 SGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEM 366
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+R+ + PN+ITF+GLLS C+H G EG YF+SM + I +I+HYGC++DL GRAGR
Sbjct: 367 ERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGR 426
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
L+ AL +I+ MP + D W ++LS+ + ++EI A + L P+D+ +YVLLSNI
Sbjct: 427 LEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNI 486
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
YAK GRW+DV+++R ++R + +KK GCS + VB +V EF+ G +
Sbjct: 487 YAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVBGKVHEFLXGKE 531
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 62/335 (18%)
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS---GYARL----GQMKKARM 204
+I+ N ++ + KC L E ++ +M +++ +S + L G + A
Sbjct: 3 AISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASS 62
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-----QMVGIEPDEISIVSVLPAC 259
+F ++ + + A+I G++ + E+L ++ +M G+E SI SVL AC
Sbjct: 63 VFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVE---FSIPSVLKAC 119
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
+L + + G +H K HL + N+++ MYI G I A ++FD+M RDVVSW+
Sbjct: 120 GKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWN 179
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++I G G+ A LF EM P D L +C
Sbjct: 180 SMIAGYLKAGEIELASELFDEM-----PERD------LVSC------------------- 209
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS-CRTYSNLEIAV 438
++D G+ GR + A + E M K D W S++S+ + ++
Sbjct: 210 ----------NAMIDGYGKCGRCELAEKVFETMSDK-DVVTWTSMISAYVQNRCPMKALD 258
Query: 439 IAMEHL-LVLEPEDTGNYVLLSNI----YAKHGRW 468
+ E L L L P+ +LS I + + G+W
Sbjct: 259 LFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKW 293
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/489 (39%), Positives = 300/489 (61%), Gaps = 7/489 (1%)
Query: 29 ELKKIHTQILKY--LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+L +I Q++ L N + K+I C + +L +A L+F Q+ PNVF +NA+I+A
Sbjct: 26 QLLQIQAQLITNPPLSLHPNLIAVKLIGACAANANLYHAQLIFAQLPNPNVFSWNAIIKA 85
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
+ N + A+N + + L P + P+++ +IK+CAGL + G ++HA V K
Sbjct: 86 HINCGAWEHALNCFNRQLSLPSAPN---PNEYIYTSLIKACAGLEAIADGLKVHAVVIKS 142
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
GL ++ +L+D+Y K E A +VF+EM RD+V+WN ++SGY G ++ AR +F
Sbjct: 143 GLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVF 202
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSL 265
D+M ++SW AMI GY G Y++A++VF +MQ VG + PD++++VSVL ACA +G+L
Sbjct: 203 DQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGAL 262
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+ G WI + + NALI+MY KCG + +A ++FD M ERDV+SWST+I G
Sbjct: 263 DFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGS 322
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
HG A +A + +M V PN++TF+GLLSAC+H G ++G+ F M +++ I K
Sbjct: 323 GTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPK 382
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+ HYGC++DLL RAGRLD+A ++I MP++P+ +WG+LL CR + + +HLL
Sbjct: 383 VGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLL 442
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
L+ E TG+YV ++ A GR +D + ++ K + K PGCS IEV+N V EF D
Sbjct: 443 ELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQHKGIIKDPGCSKIEVHNTVHEFKECD 502
Query: 506 DTKPFLKDI 514
+T KDI
Sbjct: 503 NTSSG-KDI 510
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 303/490 (61%), Gaps = 8/490 (1%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK--EPNVFLYNAMIRAYTNNHLY 93
++ + + ++ MI + G + A +F V+ E ++ ++AM+ Y N +
Sbjct: 192 RVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMG 251
Query: 94 GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI 153
A+ L+ +M GS + D+ + + +C+ +L +G+ +H K G++ +
Sbjct: 252 EEALVLFVEM-----KGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVS 306
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
+NAL+ LY C E+++A ++F++ + D+++WN++ISGY R G ++ A MLF MP
Sbjct: 307 LKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEK 366
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
+VSW+AMISGY ++EAL +F++MQ+ G+ PDE ++VS + AC L +L+LG+WIH
Sbjct: 367 DVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIH 426
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
Y +N L ++ LI+MY+KCGC+ A ++F M E+ V +W+ VI GLA +G
Sbjct: 427 AYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVE 486
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+++++F +M++ PN+ITF+G+L AC H G N+G YF+SM +H IE I+HYGC+
Sbjct: 487 QSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCM 546
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VDLLGRAG L +A +I+ MPM PD WG+LL +CR + + E+ L+ L+P+
Sbjct: 547 VDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHD 606
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLK 512
G +VLLSNIYA G W +V +R ++ + KTPGCS+IE N V EF++GD T P +
Sbjct: 607 GFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQIN 666
Query: 513 DIFWLLELLA 522
DI +L+++A
Sbjct: 667 DIEHMLDVVA 676
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 216/479 (45%), Gaps = 84/479 (17%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA---YASLLFKQVKEPN 76
+LQSC+ K++ +Q + L + +++I+ + L Y+ +F ++ PN
Sbjct: 9 LLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPN 68
Query: 77 VFLYNAMIRAYTNNHLY-----GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
F +N ++RA HLY A+ YK L S PD +T P +++ CA +
Sbjct: 69 TFTWNTIMRA----HLYLQNSPHQALLHYKLFL-----ASHAKPDSYTYPILLQCCAARV 119
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
G+Q+HAH G N L++LY C + A +VFEE D+V+WN L++
Sbjct: 120 SEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLA 179
Query: 192 GYARLGQMKKARMLFDKMPYTT---------------------------------IVSWT 218
GY + G++++A +F+ MP +VSW+
Sbjct: 180 GYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWS 239
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH------ 272
AM+S Y EAL +F +M+ G+ DE+ +VS L AC+++ ++E+G W+H
Sbjct: 240 AMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKV 299
Query: 273 ----MYCDKNHLLRRTVIC----------------------NALIEMYIKCGCINQASQL 306
KN L+ C N++I Y++CG I A L
Sbjct: 300 GVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEML 359
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F M E+DVVSWS +I G A H +A+ LF EMQ V P++ + +SAC H
Sbjct: 360 FYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATL 419
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ G + R+ ++ + L+D+ + G ++ AL + M K W +++
Sbjct: 420 DLGKWIHAYISRN-KLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEK-GVSTWNAVI 476
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 161/373 (43%), Gaps = 44/373 (11%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYL-LSQSNFLVTKMIDVCNSG 59
+A ++G L++ + + SC +++ ++I + L L N +++ +
Sbjct: 295 LAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRC---- 350
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G + A +LF + E +V ++AMI Y + + A+ L+++M + PD+
Sbjct: 351 GSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHG-----VRPDETA 405
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L I +C L LGK IHA++ + L+ + I L+D+Y KC + A +VF M
Sbjct: 406 LVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME 465
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
++ + WN +I G A GS ++L++F
Sbjct: 466 EKGVSTWNAVILGLAM-------------------------------NGSVEQSLNMFAD 494
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCG 298
M+ G P+EI+ + VL AC +G + G H + + ++++ + G
Sbjct: 495 MKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAG 554
Query: 299 CINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
+ +A +L D M + DV +W ++G H L ++ +L+ P +D + L
Sbjct: 555 LLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQ-PDHDGFHVLLS 613
Query: 358 SACAHTGFWNEGL 370
+ A G W L
Sbjct: 614 NIYASKGNWGNVL 626
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 95/237 (40%), Gaps = 37/237 (15%)
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH---KVF 175
TL +++SC CP KQ+ + GL + + L++ L+ H ++F
Sbjct: 5 TLDSLLQSCK---CPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIF 61
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
+ + + WN ++ +A + P+ ++ + ++ +
Sbjct: 62 NHLRNPNTFTWNTIM----------RAHLYLQNSPHQALLHYKLFLASHA---------- 101
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
+PD + +L CA S G +H + + + N L+ +Y
Sbjct: 102 ----------KPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYA 151
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDI 351
CG + A ++F++ D+VSW+T++ G G+ +A +F M +R + N +
Sbjct: 152 VCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSM 208
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/444 (43%), Positives = 275/444 (61%), Gaps = 14/444 (3%)
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS---- 134
L+NA+IRA + LA+ LY +LR P TLP ++KS A L P+
Sbjct: 173 LHNALIRALAGSARPHLALPLYAHLLRAGHH-----PTPHTLPSLLKSLA--LSPAVPGA 225
Query: 135 --LGKQIHAHVCKFGLKSHSITENALLDLY-GKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
L +HAH K GL + NAL+ ++ G L +A + D +N LI+
Sbjct: 226 RGLALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLIT 285
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
YAR G++ AR LFD+MP VSW+AM++GY G EAL +F +MQ G+ PD+
Sbjct: 286 AYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTV 345
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V VL ACAQLG LE G+W+H Y N++ + AL++MY KCG + A ++F M
Sbjct: 346 LVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMK 405
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E++V++W+T+I GLA HG+ +A+ LF +M+RL V P+DI FIG L AC HTG ++G
Sbjct: 406 EKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRE 465
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
FDSM R + I+ KIEHYGC+VDLL R G L++A ++E+MPMKPDA IWG+L++ CR +
Sbjct: 466 LFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFH 525
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+E+A ++H + LEP+ +G YVLL NIYA GR +R L+R K + KTPGCS
Sbjct: 526 KNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCST 585
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIF 515
+E+ + +F+ GD + PF+++I
Sbjct: 586 VEIKGVIHQFIVGDLSHPFIEEIL 609
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 3 ARIGALSIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSG 59
AR+ A ++ + V +L +C L L++ +H + + + FL T ++D+
Sbjct: 332 ARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKC 391
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G++ A +FK +KE NV + MI+ + A+ L+ QM R G + PD
Sbjct: 392 GEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQM---ERLG--VKPDDIA 446
Query: 120 LPFVIKSCAGLLCPSLGKQI-HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+ +C G+++ + V K+G+K ++DL + L EA ++ E+M
Sbjct: 447 FIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKM 506
Query: 179 TDR-DIVAWNNLISG 192
+ D + W L++G
Sbjct: 507 PMKPDALIWGALMAG 521
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/520 (37%), Positives = 308/520 (59%), Gaps = 26/520 (5%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
+S + L ++ + L C +L ++K+IH Q+LK L + +F+ K+I + + A
Sbjct: 11 VSKRRLLEQKISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVN 70
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F Q+++P+V LYN +IRA+ N LA +++ +M S + D FT PF++K+C
Sbjct: 71 VFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEM-----QDSGVCADNFTYPFLLKAC 125
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+G + + + IHA V K G N+L+D Y K EL EA ++F+EM +RD V+WN
Sbjct: 126 SGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWN 185
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
++ GY + G+M A LF+KMP +VSW+ M EA G++
Sbjct: 186 TILDGYVKAGEMNAAFELFEKMPARNVVSWSTM-----------EA----------GLKF 224
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D+ +++S+L ACA G L LG+ +H ++ T + NALI+MY KCG + A +F
Sbjct: 225 DDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIF 284
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
MV +DVVSW+ +I GLA HG KA+ LF M+ P+ +TF+G+L AC H GF +
Sbjct: 285 HGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVD 344
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EGL YF +M+RD+ + ++EHYGC+VDLLGR GRL +A ++ MP++P+A IWG+LL +
Sbjct: 345 EGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGA 404
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR +S +A + L+ E D+GN +LSNIYA G W++ + +R ++S S++K
Sbjct: 405 CRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPS 464
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
G S IEV++EV EF D + P I+ ++ L H ++
Sbjct: 465 GGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGLGQHINK 504
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/528 (37%), Positives = 302/528 (57%), Gaps = 41/528 (7%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
E F+ ++ + +++L +IH QI+ + LS S+ + T++I + + ++ +F K
Sbjct: 81 EAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHK 140
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
N+F +NA+IR T N + AI ++ MLR S I PD+ T PFV+KS AGL
Sbjct: 141 PKNLFTFNALIRGLTTNSHFFNAIFHFRLMLR-----SGIKPDRLTYPFVLKSMAGLFST 195
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE---------------- 177
LG IH + + G++ S +L+D+Y K ++L A KVF+E
Sbjct: 196 ELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNV 255
Query: 178 --------------------MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
M ++ V+W+ LI G+A+ G M +A LFD+MP +VSW
Sbjct: 256 LIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSW 315
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
T M+ G++ G +AL +F +M G+ P+ +IVS L ACA++G LE G IH Y
Sbjct: 316 TTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKD 375
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
N L + AL++MY KCG I AS++F + ++ + +W+ +I G A HG + +AI
Sbjct: 376 NGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIAC 435
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F +M + P+++ F+ LL+AC H+G + GL +FDSM+ D+ IE ++HY +VD+LG
Sbjct: 436 FKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLG 495
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
R+G+L +AL IE MPM PD IWG+L +CR + ++A A+ LL LEP TGNY+
Sbjct: 496 RSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIF 555
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
LSN YA G+WED R+R L++++ + K G S IEV +V FVSGD
Sbjct: 556 LSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGD 603
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 156/349 (44%), Gaps = 32/349 (9%)
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN----NLISGYARLGQMKKARMLFDKM 209
TE + L +++ H++ ++ ++ + + LIS + + + +F+
Sbjct: 80 TEAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHH 139
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
+ ++ A+I G T + A+ FR M GI+PD ++ VL + A L S ELG
Sbjct: 140 KPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGM 199
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER-----DVVSWSTVIGG 324
IH + + + + +L++MY+K + A ++FD+ ER + W+ +I G
Sbjct: 200 AIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKG 259
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
G KA+ LF M + ++++ L+ A G + + FD M E
Sbjct: 260 CCKAGSMKKAVKLFKAMPK----KENVSWSTLIDGFAKNGDMDRAMELFDQMP-----EK 310
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
+ + +VD R G ++AL++ +M ++P+A S LS+C LE +
Sbjct: 311 NVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIH 370
Query: 442 EHLLVLEPEDTGNYVL------LSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+++ +D G ++ L ++YAK G E S + KS++
Sbjct: 371 KYI-----KDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIR 414
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 169/381 (44%), Positives = 263/381 (69%), Gaps = 1/381 (0%)
Query: 135 LGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG Q+H+ + + G + S + +L+ LY C + +A VF EM RD+VAWN +I+GY
Sbjct: 96 LGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGY 155
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G + AR LFD MP +VSWT +I GY + EA++VFR+MQ+ GIEPD ++++
Sbjct: 156 VKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALL 215
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL AC LG+++LGEW+H + + L + + N++I+MY+KCGCI +A ++F+ M E+
Sbjct: 216 SVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEK 275
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
VV+W+T+I G A HG +A+ +F M+R + PND+TF+ +LSAC+H G + G YF
Sbjct: 276 SVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYF 335
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ M + I+ ++EHYGC+VDLLGRAG L +A +++++MP+K +A IWG+LL++ RT+ +
Sbjct: 336 NIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGD 395
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
++ A+ HL+ LEP ++GNY+LLSNI+A+ RW+DVS++RK ++ + ++ PG S IE
Sbjct: 396 ADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGASSIE 455
Query: 494 VNNEVQEFVSGDDTKPFLKDI 514
V+ V EF S D + PFL I
Sbjct: 456 VDGMVHEFTSRDGSHPFLHKI 476
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 144/325 (44%), Gaps = 47/325 (14%)
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
GDLA+A LF + E NV + +I Y A+ ++++M + I PD
Sbjct: 158 AGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEG-----IEPDGV 212
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
L V+ +C L LG+ +H V + GL+ N+++D+Y KC + +A +VFE M
Sbjct: 213 ALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGM 272
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
++ +V W LI+G+A G +A +F R
Sbjct: 273 EEKSVVTWTTLIAGFALHGLGLQAVEMF-------------------------------R 301
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEW-IHMYCDKNHLLRRTVICNALIEMYIKC 297
+M+ + P++++ +++L AC+ +G +LG W ++ + + + ++++ +
Sbjct: 302 RMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRA 361
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKA----HKAIHLFHEMQRLKVPPNDIT 352
GC+ +A L M ++ + W ++ HG A +HL E++ P N
Sbjct: 362 GCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLGEEALVHLI-ELE----PSNSGN 416
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMK 377
+I L + A W++ +MK
Sbjct: 417 YILLSNIFAEQERWDDVSKLRKAMK 441
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/511 (39%), Positives = 309/511 (60%), Gaps = 24/511 (4%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSN---FLVTKMIDVCN--SGGDLAYASL 67
L++ +++ C+NL E+K IHT ILK + + +L T+++ C+ + YA+
Sbjct: 18 LKNTLSTLIEQCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYANN 77
Query: 68 LFKQVKEPNVFLYNAMIRAY-------TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+F +K P + +YN MIR+Y +N Y A+ LYKQML I+P+ T
Sbjct: 78 VFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYK-ALMLYKQMLNKG-----IVPNNLTF 131
Query: 121 PFVIKSCAGL-LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
PF++K C+ L ++G+ IHAHV KFG + N+L+ L+ A KVF+EM
Sbjct: 132 PFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMF 191
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
RD+V+WN+++ GY R G+++ A LF KM I++W ++I+G G E+L++F +
Sbjct: 192 VRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHE 251
Query: 240 MQMVG----IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
MQ + ++PD+I+I SVL ACA LGS++ G+W+H Y KN + VI AL+ MY
Sbjct: 252 MQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYG 311
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
KCG + QA ++F+ M E+D +W+ +I A HG KA F EM++ V PN +TF+G
Sbjct: 312 KCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVG 371
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
LLSAC+H+G +G FD MKR + IE +I HY C+VD+L RA D+AL +I MPMK
Sbjct: 372 LLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMK 431
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
PD +WG+LL C+ + N+++ +L+ LEP + Y+ L +IY K G+++ R+R
Sbjct: 432 PDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIR 491
Query: 476 KLIRSKSMK-KTPGCSLIEVNNEVQEFVSGD 505
++ + ++ K PGCS+IE+N VQEF G+
Sbjct: 492 NSMKERGIETKIPGCSIIEINGVVQEFSVGE 522
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/444 (43%), Positives = 275/444 (61%), Gaps = 14/444 (3%)
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS---- 134
L+NA+IRA + LA+ LY +LR P TLP ++KS A L P+
Sbjct: 173 LHNALIRALAGSARPHLALPLYAHLLRAGHH-----PTPHTLPSLLKSLA--LSPAVPGA 225
Query: 135 --LGKQIHAHVCKFGLKSHSITENALLDLY-GKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
L +HAH K GL + NAL+ ++ G L +A + D +N LI+
Sbjct: 226 RGLALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLIT 285
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
YAR G++ AR LFD+MP VSW+AM++GY G EAL +F +MQ G+ PD+
Sbjct: 286 AYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTV 345
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V VL ACAQLG LE G+W+H Y N++ + AL++MY KCG + A ++F M
Sbjct: 346 LVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMK 405
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E++V++W+T+I GLA HG+ +A+ LF +M+RL V P+DI FIG L AC HTG ++G
Sbjct: 406 EKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRE 465
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
FDSM R + I+ KIEHYGC+VDLL R G L++A ++E+MPMKPDA IWG+L++ CR +
Sbjct: 466 LFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFH 525
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+E+A ++H + LEP+ +G YVLL NIYA GR +R L+R K + KTPGCS
Sbjct: 526 KNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCST 585
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIF 515
+E+ + +F+ GD + PF+++I
Sbjct: 586 VEIKGVIHQFIVGDLSHPFIEEIL 609
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 3 ARIGALSIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSG 59
AR+ A ++ + V +L +C L L++ +H + + + FL T ++D+
Sbjct: 332 ARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKC 391
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G++ A +FK +KE NV + MI+ + A+ L+ QM R G + PD
Sbjct: 392 GEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQM---ERLG--VKPDDIA 446
Query: 120 LPFVIKSCAGLLCPSLGKQIH-AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+ +C G+++ + V K+G+K ++DL + L EA ++ E+M
Sbjct: 447 FIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKM 506
Query: 179 TDR-DIVAWNNLISG 192
+ D + W L++G
Sbjct: 507 PMKPDALIWGALMAG 521
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/526 (36%), Positives = 304/526 (57%), Gaps = 43/526 (8%)
Query: 18 VPILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---LAYASLLFKQ 71
VPIL E +L+E+++ H +LK L F +K++ + + ++YA + +
Sbjct: 10 VPILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNR 69
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ PN F +N++IRAY N+ +A+ ++++ML P + PDK++ FV+K+CA
Sbjct: 70 IESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGP-----VFPDKYSFTFVLKACAAFC 124
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC---------------------DELI- 169
G+QIH K L + EN L+++YG+ + L+
Sbjct: 125 GFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 184
Query: 170 ---------EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
EA +F+EM +R++ +WN +ISGYA G +K+AR +FD MP +VSW AM
Sbjct: 185 AYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAM 244
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
++ Y H+G Y E L+VF M E PD ++V+VL ACA LGSL GEW+H+Y DK+
Sbjct: 245 VTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHG 304
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
+ + AL++MY KCG I++A ++F +RDV +W+++I GL+ HG A+ +F
Sbjct: 305 IEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFS 364
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
EM PN ITFIG+LSAC H G ++ F+ M + IE IEHYGC+VDLLGR
Sbjct: 365 EMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRM 424
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLS 459
G+ ++A ++ E+P + + SLL +C+ + LE A LL P ++ YV +S
Sbjct: 425 GKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMS 484
Query: 460 NIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
N+YA HGRW++ +R +R++ +KK PGCS+IEV+ V EF++G+
Sbjct: 485 NLYASHGRWDEAMEVRGKMRAERVKKNPGCSMIEVDGVVHEFLAGE 530
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/527 (38%), Positives = 309/527 (58%), Gaps = 50/527 (9%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN--SGGDLAYASLLFKQVKEPNVFL 79
Q C N LK++H ++ L+ + ++ ++I V G + YA LF Q+ +P++F+
Sbjct: 21 QKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQPDIFM 80
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N MIR A++LY QM + PDKFT FV+K+C L LG I
Sbjct: 81 WNTMIRGSAQTLKPATAVSLYTQM-----ENRGVRPDKFTFSFVLKACTKLSWVKLGFGI 135
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAH--------------------------- 172
H V K G +S++ N L+ + C +L A
Sbjct: 136 HGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKL 195
Query: 173 ----KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
++F+EM +D+V+WN +I+ YA+ G+M+KAR LFD++P +V+W AMI+GY
Sbjct: 196 DVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSR 255
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH-----MYCDKNHLLRR 283
EAL++F M+ +G PD+++++S+L A A LG LE+G+ IH M C +L
Sbjct: 256 LNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVL-- 313
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+ NALI+MY KCG I A ++F M ++D SW+++IGGLA HG A ++I+LF EM R
Sbjct: 314 --LSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLR 371
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
LK+ PN+ITF+ +L AC+H G EG MYF+ MK IE I+HYGC+VD+LGRAG L
Sbjct: 372 LKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLI 431
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A + I+ M ++P+A IW +LL +CR + ++E+ A E LL + +++G+YVLLSNIYA
Sbjct: 432 EAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYA 491
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE-VQEFVSGDDTKP 509
G W+ V ++RKL+ +KK G SLI+ +N + F+ D+KP
Sbjct: 492 SQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDNSFLMHFLF--DSKP 536
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/518 (37%), Positives = 308/518 (59%), Gaps = 37/518 (7%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
++ ++K +Q +L+ + I ++ + YA L + Q++ PNVF+YNAMI+ + ++
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
A+ LY QMLR + + P +T P +IK+C + + +H HV + G SH
Sbjct: 61 PVQALELYVQMLR-----ANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHV 115
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW-------------------------- 186
+ +L+D Y + E+ +VF+EM +RD+ AW
Sbjct: 116 FVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDR 175
Query: 187 -----NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
N LI GYARL ++ A +LF++MP I+SWT MI+ Y+ + EAL VF +M
Sbjct: 176 NLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMA 235
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
GI PDE+++ +V+ ACA LG+L+LG+ IH Y ++ I +ALI+MY KCG ++
Sbjct: 236 KHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLD 295
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
++ +F ++ E+++ W++VI GLA HG A +A+ +F +M+R K+ PN +TF+ +LSAC
Sbjct: 296 RSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACN 355
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G EG F SM RDH I +EHYGC+VDLL +AG L++AL +I M ++P+A IW
Sbjct: 356 HAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIW 415
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
G+LLS C+ + NLEIA +A L+VLEP ++G Y LL N+ A+ RW + +++R ++ +
Sbjct: 416 GALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQ 475
Query: 482 SM-KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+ K+ PG S IE+ ++V +F + D + +I+ LL
Sbjct: 476 GVEKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLL 513
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 126/277 (45%), Gaps = 39/277 (14%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
++ +C +L L K+IH I+++ + ++ + +ID+ G L + L+F +++E N
Sbjct: 249 VISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKN 308
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLLCPS 134
+F +N++I + A+ ++ +M R+ I P+ T V+ +C AGL+
Sbjct: 309 LFCWNSVIEGLAVHGYAEEALAMFDKMEREK-----IKPNGVTFVSVLSACNHAGLI--E 361
Query: 135 LGKQIHAHVCKFGLKSHSITENA-----LLDLYGKCDELIEAHKVFEEMT-DRDIVAWNN 188
G++ A + + HSI ++DL K L EA ++ M + + V W
Sbjct: 362 EGRKRFASMT----RDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGA 417
Query: 189 LISGYARLGQMKKARMLFDKM----PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
L+SG ++ A++ +K+ P + +T +++ + + EA + M+ G
Sbjct: 418 LLSGCKLHRNLEIAQVAANKLMVLEPGNSGY-YTLLVNMNAEVNRWGEAAKIRLTMKEQG 476
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNH 279
+E C +E+ +H + DK+H
Sbjct: 477 VEKR----------CPGSSWIEMESQVHQFAASDKSH 503
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 305/521 (58%), Gaps = 53/521 (10%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L++C L+++H +I++ L Q +FL+++ + +CNS + +Y + +F V P+ L
Sbjct: 31 LLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVFNGVSSPSTVL 90
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N I+ Y+ N+ L ++L+ +M R S +PDKFT P +IK+C+ + G
Sbjct: 91 WNTYIKGYSENYSVSLTVSLFIRMKR-----SDAVPDKFTYPSLIKACSKVCGVKEGVAF 145
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H + G+ +L+DLYGKC E++ A KVF+EM +R++V+W +I+GYA +
Sbjct: 146 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDL 205
Query: 200 KKARMLFDKMPYTTIVSWTAMISGY-------------------------THIGSYAEAL 234
+AR LFD+MP VSW A+ISGY T I YA++
Sbjct: 206 VEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSG 265
Query: 235 D----------------------VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
D +FR ++PDE +VS++ AC+Q+GSLEL +W+
Sbjct: 266 DMASARFVFEEAPERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVD 325
Query: 273 MYCDKNHL-LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
Y K+ + + R + ALI+M KCG +++A++LF++M +RD++S+ +++ GL+ HG
Sbjct: 326 DYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCG 385
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
+A+ LF M + P+D+ F +L+AC+ G +EG YF+SMK D+ I +HY C
Sbjct: 386 PQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYAC 445
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VDLLGRAGRL +A +++ MP++P A WG+LL +C+ + ++E+ + + L LEP++
Sbjct: 446 MVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQN 505
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
GNYVLLSNIYA +W DVS +R +R + ++K PGCS I
Sbjct: 506 AGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/507 (38%), Positives = 309/507 (60%), Gaps = 15/507 (2%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDV--CNSGGDLAYASLLFKQVKEPNVF 78
L+SC+++ ++K+ H ++ L K++ V +S G L+YA LF Q+ +P+VF
Sbjct: 22 LESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVF 81
Query: 79 LYNAMIRAY----TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+YN MI+A+ T++H ++ ++ M+R S LP+++T FV K+C L
Sbjct: 82 IYNTMIKAHAVIPTSSHN---SMRIFLSMVRV----SGFLPNRYTFVFVFKACGNGLGVL 134
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+QI H K GL+S+ NA++ +Y + EA +VF+ D+D+ +WN +I GY
Sbjct: 135 EGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYV 194
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
G++ +A+ +FD+M +VSWT +I+GY +G + EALD+F +M G P+E ++ S
Sbjct: 195 GSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLAS 254
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF--DQMVE 312
L ACA L +L+ G WIH+Y DK+ + + +L++MY KCG I+ A+++F + ++
Sbjct: 255 ALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLK 314
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
V W+ +IGG A HGK+ +AI LF +M+ KV PN +TF+ LL+AC+H EG Y
Sbjct: 315 LKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGY 374
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F SM + IE +IEHYGC+VDLLGR+G L +A + MPM PDA IWG+LL +CR +
Sbjct: 375 FKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHK 434
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
++E + + L+ + G +VLL+N+Y+ G+W++ +R+ I KKTPGCS I
Sbjct: 435 DIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSI 494
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLE 519
E+N +F+ GD + P K ++ L+
Sbjct: 495 ELNGVFHQFLVGDRSHPQTKQLYLFLD 521
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/482 (39%), Positives = 296/482 (61%), Gaps = 6/482 (1%)
Query: 42 LSQSNFLVTK-MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLY 100
+ Q N + + MI + G + A LF ++ E ++ ++A+I Y N +Y A+ ++
Sbjct: 233 MPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMF 292
Query: 101 KQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLD 160
+M + + D+ + V+ +CA L GK IH V + G++S+ +NAL+
Sbjct: 293 IEM-----NANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIH 347
Query: 161 LYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
+Y E+++A K+F + D ++WN++ISG + G ++KAR LFD MP IVSW+A+
Sbjct: 348 MYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAV 407
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
ISGY ++E L +F +MQ+ I PDE +VSV+ AC L +L+ G+W+H Y KN L
Sbjct: 408 ISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGL 467
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
++ L++MY+KCGC+ A ++F+ M E+ V SW+ +I GLA +G +++ +F E
Sbjct: 468 KVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSE 527
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
M+ V PN+ITF+G+L AC H G +EG +F SM H IE ++HYGC+VDLLGRAG
Sbjct: 528 MKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAG 587
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSN 460
L++A +IE MPM PD WG+LL +C+ + + E+ L+ L+P+ G +VLLSN
Sbjct: 588 LLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSN 647
Query: 461 IYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLEL 520
I+A G WEDV +R +++ + + KTPGCSLIE N V EF++GD T P++ + +L
Sbjct: 648 IFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNE 707
Query: 521 LA 522
+A
Sbjct: 708 MA 709
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 231/469 (49%), Gaps = 71/469 (15%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG--DLAYASLLFKQVKEPNVF 78
L +C NL + +I +Q++ F ++++ L Y+ +F +++ N F
Sbjct: 48 LHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGF 107
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
++N M+RAY ++ A+ LYK M+++ + PD +T P V+++CA L GK+
Sbjct: 108 MWNTMMRAYIQSNSAEKALLLYKLMVKNN-----VGPDNYTYPLVVQACAVRLLEFGGKE 162
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
IH HV K G S +N L+++Y C + +A K+F+E D V+WN++++GY + G
Sbjct: 163 IHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGD 222
Query: 199 MKKARMLFDKMPYTTI-------------------------------VSWTAMISGYTHI 227
+++A+++FD+MP I VSW+A+ISGY
Sbjct: 223 VEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQN 282
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
G Y EAL +F +M G+ DE+ +VSVL ACA L ++ G+ IH + + +
Sbjct: 283 GMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQ 342
Query: 288 NALIEMY-------------------------------IKCGCINQASQLFDQMVERDVV 316
NALI MY +KCG + +A LFD M E+D+V
Sbjct: 343 NALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIV 402
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SWS VI G A H + + LFHEMQ ++ P++ + ++SAC H ++G + +
Sbjct: 403 SWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQG-KWVHAY 461
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
R + ++ + L+D+ + G ++ AL + M K + W +L+
Sbjct: 462 IRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSS-WNALI 509
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/552 (38%), Positives = 306/552 (55%), Gaps = 71/552 (12%)
Query: 17 FVPILQSCENL---IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL------ 67
F +L+SC + E K+IH +LK L F+ T +I++ G+L YA L
Sbjct: 135 FPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSS 194
Query: 68 -------------------------LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102
LF+++ + +NAMI Y + + A+ +++
Sbjct: 195 LRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQE 254
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M R + + P++ T+ V+ +CA LG + + + GL S+ NAL+D+Y
Sbjct: 255 MKR-----ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMY 309
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
KC G + KAR LF+ + I+SW MI
Sbjct: 310 SKC-------------------------------GDLDKARDLFEGICEKDIISWNVMIG 338
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL-L 281
GY+H+ SY EAL +FR+MQ +EP++++ VS+LPACA LG+L+LG+WIH Y DK L L
Sbjct: 339 GYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGL 398
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
T + +LI+MY KCG I A Q+F M + + SW+ +I GLA HG A+ A+ LF +M
Sbjct: 399 TNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQM 458
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+ P+DITF+G+LSAC+H G G F SM D+ I K++HYGC++DLLGRAG
Sbjct: 459 RDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGL 518
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
D+A +++ M MKPD IWGSLL +CR + N+E+ A +HL LEPE+ G YVLLSNI
Sbjct: 519 FDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNI 578
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
YA GRW+DV+R+R + K MKK PGCS IEV++ V EF+ GD +DI+ +L+ +
Sbjct: 579 YATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEI 638
Query: 522 ALHQDRAKDVID 533
++A V D
Sbjct: 639 DQLLEKAGHVPD 650
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 255/437 (58%), Gaps = 12/437 (2%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
+L +C++ LK+IH+QI+K L + F ++K+I+ C + G+L+YA LLF+ +++PN
Sbjct: 38 LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQ 97
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F++N MIR + + AI+ Y +ML + P+ +T PF++KSCA + GK
Sbjct: 98 FIWNTMIRGNSLSSSPVGAIDFYVRMLL-----CGVEPNSYTFPFLLKSCAKVGATQEGK 152
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIH HV K GL+S +L+++Y + EL A VF + + RD V++ LI+GY G
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ AR LF+++P VSW AMI+GY G + EAL F++M+ + P+E ++V+VL
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACAQ GSLELG W+ + + + L + NALI+MY KCG +++A LF+ + E+D++S
Sbjct: 273 ACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIIS 332
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +IGG ++ +A+ LF +MQ+ V PND+TF+ +L ACA+ G + G +
Sbjct: 333 WNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID 392
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA-KIWGSLLS--SCRTYSNL 434
+ + L+D+ + G ++ A + MKP + W +++S + ++N+
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVF--AGMKPKSLGSWNAMISGLAMHGHANM 450
Query: 435 EIAVIAMEHLLVLEPED 451
+ + EP+D
Sbjct: 451 ALELFRQMRDEGFEPDD 467
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 49/364 (13%)
Query: 14 EDRFVPILQSC--ENLIELKK-IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E V +L +C +EL + + I + L + LV +ID+ + GDL A LF+
Sbjct: 264 ESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFE 323
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ E ++ +N MI Y++ + Y A+ L+++M + S + P+ T ++ +CA L
Sbjct: 324 GICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQ-----SNVEPNDVTFVSILPACAYL 378
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
LGK IHA++ K F +T+ + W +LI
Sbjct: 379 GALDLGKWIHAYI----------------------------DKKFLGLTNTSL--WTSLI 408
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
YA+ G ++ A+ +F M ++ SW AMISG G AL++FRQM+ G EPD+I
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468
Query: 251 SIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+ V VL AC+ G +ELG + + + + +I++ + G ++A L
Sbjct: 469 TFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKN 528
Query: 310 M-VERDVVSWSTVIGGLANHGKAH----KAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
M ++ D W +++G HG A HLF E++ P N ++ L + A G
Sbjct: 529 MEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLF-ELE----PENPGAYVLLSNIYATAG 583
Query: 365 FWNE 368
W++
Sbjct: 584 RWDD 587
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/530 (36%), Positives = 309/530 (58%), Gaps = 36/530 (6%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
+++C + EL + ++K Q FLV + I + + Y F Q++ PNVF+Y
Sbjct: 143 IKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVY 202
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
NAMI+ + A+ Y ML + S +LP +T ++K+C + LG+ +H
Sbjct: 203 NAMIKGFVYCGYPFRALQCYVHMLEE----SNVLPTSYTFSSLVKACTFMCAVELGQMVH 258
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW-------------- 186
H+ K G +SH + AL+D Y K + L EA KVF+EM +RD AW
Sbjct: 259 CHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMD 318
Query: 187 -----------------NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
N +I GYARLG ++ A +LF++MP I+SWT MI+ Y+
Sbjct: 319 SARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQ 378
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
Y +AL ++ +M++ GI PDE+++ +V ACA +G+LELG+ IH Y L I +A
Sbjct: 379 YQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSA 438
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
L++MY KCG ++ + +F ++ ++++ W+ VI GLA HG A KA+ +F M+R K+ PN
Sbjct: 439 LVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPN 498
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TFI +LSAC H G +EG F SM RD+ I I HYGC+VD+L ++G L++AL +I
Sbjct: 499 GVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELI 558
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
+ M +P++ IWG+LL+ C+ + N EIA A+E L++LEP ++G+Y LL ++YA+ W
Sbjct: 559 KSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWM 618
Query: 470 DVSRMRKLIRSKSM-KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+V+ +R +++ K + KK PG S IE+ + +F + D+ P I+++L
Sbjct: 619 EVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFVL 668
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/574 (37%), Positives = 322/574 (56%), Gaps = 60/574 (10%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
S ++L ++ + L C NL ++K++H QILK L F+V K+I + + A+
Sbjct: 14 FSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATN 73
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPR--------------TGSLI 113
F QV+ PNV LYN MIRA+++N A + M RD TG++
Sbjct: 74 AFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVW 133
Query: 114 LP----------------DKFTLPFVIKS----------CAGLLCPSLGKQ--------I 139
LP D F +I S A L S+G + +
Sbjct: 134 LPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSM 193
Query: 140 HAHVCKFGL------------KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+ + K GL + I+ N +LD Y K ++ +A K+F+EM +R++V+W+
Sbjct: 194 ISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWS 253
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
++ GY + G M+ ARMLFDKMP +VSWT ++SG+ G EA+ +F QM+ ++
Sbjct: 254 TMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKL 313
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D +++S+L ACA+ G L LGE IH N+ T I NAL++MY KCG +N A +F
Sbjct: 314 DNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVF 373
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
+ + +DVVSW+ ++ GLA HG KA+ LF M+ PN +T IG+L AC H G +
Sbjct: 374 NDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLID 433
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+G+ YF +M+RD+ + ++EHYGC+VDLLGR GRL++A+ +I MPM P+A IWG+LL +
Sbjct: 434 DGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGA 493
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR ++ +E+A ++HL+ LEP D+GN+ +LSNIYA G W V+ R +RS KK
Sbjct: 494 CRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPS 553
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
G S IEVNNEV EF D + P +I+ ++ L
Sbjct: 554 GASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGL 587
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/430 (42%), Positives = 282/430 (65%), Gaps = 3/430 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCP--SLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELI 169
I P+ T ++ CA L SLG +HA+ K GL + ++ AL+D+Y KC +
Sbjct: 6 IDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGHVE 65
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+ F+E+ ++ +WN +I G+ R G++++A +FD+MP ++SWT +I+G+ +G
Sbjct: 66 LSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGL 125
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EAL+ FR+MQ+ +EPD ++IV+VL ACA LG+L LG W+H Y K L ICN+
Sbjct: 126 FEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNVKICNS 185
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI++Y +CG I A Q+F++M ER +VSW+++IGGLA +G +A+ F MQ+ PN
Sbjct: 186 LIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQGFKPN 245
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
D++F G L+AC+HTG +EGL YFD M+R H I +IEHYGC+VDL RAGRL+ A++++
Sbjct: 246 DVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVV 305
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
+ MPMKP+ + GSLL++CRT ++E+A M +L+ L+P NYVLLSNIYA GRW+
Sbjct: 306 QNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAAVGRWD 365
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAK 529
+ R +++ ++K PG S IE+ ++ EFV+GD + +DI+ +LELL+ Q
Sbjct: 366 GACKQRMTMKALGIQKKPGFSSIEIGCDIHEFVAGDKSHDKAEDIYSMLELLSFDQALCG 425
Query: 530 DVIDIMYEDI 539
V + M +D+
Sbjct: 426 YVPEAMAKDM 435
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 141/344 (40%), Gaps = 82/344 (23%)
Query: 17 FVPILQSCENLIELKK-----IHTQILKYLLSQSNFLV-TKMIDVCNSGGDLAYASLLFK 70
F+ +L C +L +H K L N +V T ++D+ G + + L F
Sbjct: 13 FITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGHVELSRLCFD 72
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTG-------------------- 110
++K N F +N MI + N AI ++ +M P G
Sbjct: 73 ELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEM---PERGVISWTVLINGFVKMGLFEEA 129
Query: 111 ---------SLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL 161
S + PD+ T+ V+ +CA L LG +H + K GL+ + N+L+DL
Sbjct: 130 LEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNVKICNSLIDL 189
Query: 162 YGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSW 217
Y +C + A +VFE+M +R +V+WN++I G A G ++A FD M VS+
Sbjct: 190 YSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQGFKPNDVSF 249
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMV---------------------------------G 244
T ++ +H G E L F M+ V
Sbjct: 250 TGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVVQNMP 309
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMY-------CDKNHLL 281
++P+E+ + S+L AC G +EL E + Y D N++L
Sbjct: 310 MKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVL 353
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 37/208 (17%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSL--ELGEWIHMYCDKNHL-LRRTVICNALIEMYIK 296
M+++ I+P+ ++ +++L CA L S LG +H Y K L ++ AL++MY K
Sbjct: 1 MRLLEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAK 60
Query: 297 CG-------C------------------------INQASQLFDQMVERDVVSWSTVIGGL 325
CG C I +A ++FD+M ER V+SW+ +I G
Sbjct: 61 CGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGF 120
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL-MYFDSMKRDHHIEH 384
G +A+ F +MQ KV P+ +T + +LSACA+ G GL ++ ++K+ +
Sbjct: 121 VKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKG--LRD 178
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEM 412
++ L+DL R G ++ A + E+M
Sbjct: 179 NVKICNSLIDLYSRCGAIELARQVFEKM 206
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/512 (39%), Positives = 295/512 (57%), Gaps = 15/512 (2%)
Query: 10 IKELEDRFVPILQS-CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL---AYA 65
I+ LE V I++S C L K++H I + L QS++++T ++ + + Y
Sbjct: 6 IRVLEWEAVRIIESHCTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYP 65
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LLF QV PN FLY+A+IRAY N + +I LY ML + + P FT +
Sbjct: 66 HLLFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNN-----VSPVSFTFSALFS 120
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
L PSLG Q+H H FG + N ++ +Y K L A KVF+EM RD+V
Sbjct: 121 L---LKNPSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVT 177
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W LI YAR G M A LF +P +V+WT+M++GY+ +AL FR+M+ G+
Sbjct: 178 WTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGV 237
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR--RTVICNALIEMYIKCGCINQA 303
DEI++V + ACAQLG +WI + + + +ALI+MY KCG + +A
Sbjct: 238 VTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEA 297
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+F M E +V S+S++I G A HG+A AI LF+EM + PN +TF+GL +AC+H
Sbjct: 298 YNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHA 357
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G +G F +MK + + +HY C+ DLLGRAG L++AL +++ MPM+P+ +WG+
Sbjct: 358 GMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGA 417
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL + + N ++A IA L LEP++ GNY+LLS YA +W+DVSR+RKL+R K +
Sbjct: 418 LLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQL 477
Query: 484 KKTPGCSLIEVNNE-VQEFVSGDDTKPFLKDI 514
+K PGCS +E N + EF +GD P + +I
Sbjct: 478 RKNPGCSWVEAKNGIIHEFFAGDVKHPEINEI 509
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/580 (35%), Positives = 318/580 (54%), Gaps = 76/580 (13%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
+ + F +L + L +IH Q++ L +S FLVTK ++ + G++ YA +F +
Sbjct: 69 DFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDE 128
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
EP+VFL+NA+IR Y++++ +G AI +Y +M S + PD FTLP V+K+C+G+
Sbjct: 129 FPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRM-----QASGVNPDGFTLPCVLKACSGVP 183
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL----------------------- 168
+GK++H + + G +S +N L+ LY KC +
Sbjct: 184 VLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMIS 243
Query: 169 --------IEAHKVFEEMTDRDIVA-WNNLIS---------------------------- 191
+EA ++F +M R++ W L+S
Sbjct: 244 GYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEF 303
Query: 192 ----------GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
YA+ GQ+ AR FD+M ++ W AMISGY G EA+ +F++M
Sbjct: 304 EPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMI 363
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
I D I++ S + ACAQ+GSL+L +W+ Y +K + ALI+M+ KCG ++
Sbjct: 364 SKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVD 423
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
A ++FD+ +++DVV WS +I G HG+ AI LF+ M++ V PND+TF+GLL+AC
Sbjct: 424 LAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACN 483
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H+G EG F SMK + IE + +HY C+VDLLGR+G L++A + I MP++P +W
Sbjct: 484 HSGLVEEGWELFHSMKY-YGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVW 542
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
G+LL +C+ Y ++ + A E L L+P +TG+YV LSN+YA W+ V+++R L+R K
Sbjct: 543 GALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREK 602
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+ K G SLIE+N ++Q F GD + P K+IF LE L
Sbjct: 603 GLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESL 642
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/567 (37%), Positives = 307/567 (54%), Gaps = 71/567 (12%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
L C NL + +IH Q+LK L Q F+ K+I + LA A +F V PNV LY
Sbjct: 28 LHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLY 87
Query: 81 NAMIRAYTNNHLY-GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
N++IRA+ +N + L N + QM ++ + PD FT PF++K+C G L + I
Sbjct: 88 NSIIRAHAHNTSHPSLPFNAFFQMQKNG-----LFPDNFTYPFLLKACTGPSSLPLVRMI 142
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCD--------------------------------- 166
HAHV KFG N+L+D Y +C
Sbjct: 143 HAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCG 202
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGY-- 224
EL A K+F+EM +RD+V+WN ++ GYA+ G+M +A LF++MP IVSW+ M+ GY
Sbjct: 203 ELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSK 262
Query: 225 -----------------------THIGSYAE------ALDVFRQMQMVGIEPDEISIVSV 255
T I YAE A +++ +M+ G+ PD+ ++S+
Sbjct: 263 GGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISI 322
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD-QMVERD 314
L ACA+ G L LG+ IH + T + NA I+MY KCGC++ A +F M ++D
Sbjct: 323 LAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKD 382
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VVSW+++I G A HG KA+ LF M P+ TF+GLL AC H G NEG YF
Sbjct: 383 VVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFY 442
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
SM++ + I ++EHYGC++DLLGR G L +A ++ MPM+P+A I G+LL++CR ++++
Sbjct: 443 SMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDV 502
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
+ A E L +EP D GNY LLSNIYA+ G W +V+ +R + + +K G S IEV
Sbjct: 503 DFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEV 562
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLELL 521
EV EF D + P DI+ +++ L
Sbjct: 563 EEEVHEFTVFDQSHPKSDDIYKMIDRL 589
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/531 (37%), Positives = 311/531 (58%), Gaps = 15/531 (2%)
Query: 14 EDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F +L +C L ++ K +H+ I K ++ + ++D+ + G++ A +F
Sbjct: 152 EYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD 211
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + NV +N++I + N A+++++ ML S + PD+ TL VI +CA L
Sbjct: 212 EMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE-----SRVEPDEVTLASVISACASL 266
Query: 131 LCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
+G+++H V K L++ I NA +D+Y KC + EA +F+ M R+++A ++
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
ISGYA K AR++F KM +VSW A+I+GYT G EAL +F ++ + P
Sbjct: 327 ISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT------VICNALIEMYIKCGCINQA 303
S ++L ACA L L LG H++ K+ ++ + N+LI+MY+KCGC+ +
Sbjct: 387 YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+F +M+ERD VSW+ +I G A +G ++A+ LF EM P+ IT IG+LSAC H
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
GF EG YF SM RD + +HY C+VDLLGRAG L++A ++IEEMPM+PD+ IWGS
Sbjct: 507 GFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGS 566
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL++C+ + N+ + E LL +EP ++G YVLLSN+YA+ G+WEDV +RK +R + +
Sbjct: 567 LLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGV 626
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI 534
K PGCS I++ F+ D + P K I LL++L +D +I
Sbjct: 627 TKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEI 677
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 149/279 (53%)
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ +HA V K G + +N L+D Y KC L + +VF++M R+I WN++++G +L
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + +A LF MP +W +M+SG+ EAL F M G +E S SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+ L + G +H K+ L I +AL++MY KCG +N A ++FD+M +R+VV
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+++I +G A +A+ +F M +V P+++T ++SACA G +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
++ + + I VD+ + R+ +A I + MP++
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 212/476 (44%), Gaps = 99/476 (20%)
Query: 17 FVPILQSC----ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
F +L SC + I ++ +H ++K S F+ ++ID + G L +F ++
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLILP---------------- 115
+ N++ +N+++ T A +L++ M RD T + ++
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 116 ---------DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
++++ V+ +C+GL + G Q+H+ + K S +AL+D+Y KC
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ +A +VF+EM DR++V+WN+LI+ + + G
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA--------------------------- 234
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
EALDVF+ M +EPDE+++ SV+ ACA L ++++G+ +H KN LR +I
Sbjct: 235 ----VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII 290
Query: 287 -CNALIEMYIKCGCINQASQLFD-------------------------------QMVERD 314
NA ++MY KC I +A +FD +M ER+
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERN 350
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-----HTGFWNEG 369
VVSW+ +I G +G+ +A+ LF ++R V P +F +L ACA H G
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ K E I L+D+ + G +++ + +M M+ D W +++
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 308/536 (57%), Gaps = 68/536 (12%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L++C L+++H +I++ L Q +F++++ + +CNS + +Y + +F V P+ L
Sbjct: 31 LLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVL 90
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N I+ Y+ N+ L ++L+ +M R S +PDKFT P +IK+C+ + G
Sbjct: 91 WNTYIKGYSENYSVSLTVSLFIRMKR-----SDAVPDKFTYPSLIKACSKVCGVKEGVAF 145
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDE-------------------------------L 168
H + G+ +L+DLYGKC E L
Sbjct: 146 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDL 205
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS------------ 216
+EA K+F+EM +++ V+WN +ISGY + G ++ AR +FD+MP+ +VS
Sbjct: 206 VEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSG 265
Query: 217 -------------------WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
W+A+ISGY G EA+ +F +M ++PDE +VS++
Sbjct: 266 DMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMS 325
Query: 258 ACAQLGSLELGEWIHMYCDKNHL-LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+Q+GSLEL +W+ Y K+ + + R + ALI+M KCG +++A++LF++M +RD++
Sbjct: 326 ACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLI 385
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
S+ +++ GL+ HG +A+ LF M + P+D+ F +L+AC+ G +EG YF+SM
Sbjct: 386 SYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESM 445
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
K D+ I +HY C+VDLLGRAGRL +A +++ MP++P A WG+LL +C+ + ++E+
Sbjct: 446 KTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIEL 505
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
+ + L LEP++ GNYVLLSNIYA +W DVS +R +R + ++K PGCS I
Sbjct: 506 GEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 97/228 (42%), Gaps = 11/228 (4%)
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
SI ++L AC +LE +H + L + I + + + + + +F+ +
Sbjct: 27 SISTLLKACTTTSTLEQ---VHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGV 83
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
V W+T I G + + + LF M+R P+ T+ L+ AC+ EG+
Sbjct: 84 SSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGV 143
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+ S R + + L+DL G+ G + A + +EM + + W ++++ +
Sbjct: 144 AFHGSAVR-CGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGER-NVVSWTAMIAGYAS 201
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
+S+L + L PE N V + I + + + D+ RK+
Sbjct: 202 FSDL----VEARKLFDEMPEK--NAVSWNAIISGYVKCGDLRSARKMF 243
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/521 (36%), Positives = 300/521 (57%), Gaps = 37/521 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVKEP 75
+ + C++L +K+I I K L+ + K++ C L YA LF ++ P
Sbjct: 9 LALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNP 68
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+VF+YN +IR +++ A+ L+ +M R S+ LPD F+ F++K+ A +
Sbjct: 69 DVFMYNTLIRGLSDSDTPSNALQLFVEM----RRKSVALPDSFSFAFLLKAAANCRALTN 124
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS---- 191
G Q+H +GL SH L+ +Y +C L+ A KVF+EM + +IVAWN +++
Sbjct: 125 GLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFR 184
Query: 192 ---------------------------GYARLGQMKKARMLFDKMPYTTIVSWTAMISGY 224
GY + G+++ AR +F KMP VSW+ MI G+
Sbjct: 185 CEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGF 244
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT 284
H G++ +A FR+++ G+ P+E+S+ VL ACAQ G+ E G +H + +K+ L+
Sbjct: 245 AHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQII 304
Query: 285 VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
+ NALI+ Y KCG ++ A +FD M+ R VSW+ +I G+A HG +AI LF+EM+
Sbjct: 305 SVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEES 364
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
+ P+ ITFI +L AC+H G + G YF M + IE IEHYGC+VDL GRAG+L Q
Sbjct: 365 NIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQ 424
Query: 405 ALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAK 464
A + + +MP+ P+ +W +LL +C + NL +A L L+PE++G++VLLSNIYA
Sbjct: 425 AYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAV 484
Query: 465 HGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
G+W+DV+ +R+ + + +KKTPG S+IEVN + FV+G+
Sbjct: 485 AGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGE 525
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/530 (36%), Positives = 308/530 (58%), Gaps = 36/530 (6%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
+++C + EL + ++K Q FLV + I + + Y F Q++ PNVF+Y
Sbjct: 46 IKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVY 105
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
NAMI+ + A+ Y ML + S +LP +T ++K+C + LG+ +H
Sbjct: 106 NAMIKGFVYCGYPFRALQCYVHMLEE----SNVLPTSYTFSSLVKACTFMCAVELGQMVH 161
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW-------------- 186
H+ K G +SH + AL+D Y K + L EA KVF+EM +RD AW
Sbjct: 162 CHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMD 221
Query: 187 -----------------NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
N +I GY RLG ++ A +LF++MP I+SWT MI+ Y+
Sbjct: 222 SARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQ 281
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
Y +AL ++ +M++ GI PDE+++ +V ACA +G+LELG+ IH Y L I +A
Sbjct: 282 YQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSA 341
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
L++MY KCG ++ + +F ++ ++++ W+ VI GLA HG A KA+ +F M+R K+ PN
Sbjct: 342 LVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPN 401
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TFI +LSAC H G +EG F SM RD+ I I HYGC+VD+L ++G L++AL +I
Sbjct: 402 GVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELI 461
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
+ M +P++ IWG+LL+ C+ + N EIA A+E L++LEP ++G+Y LL ++YA+ W
Sbjct: 462 KSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWM 521
Query: 470 DVSRMRKLIRSKSM-KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+V+ +R +++ K + KK PG S IE+ + +F + D+ P I+++L
Sbjct: 522 EVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFIL 571
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 294/488 (60%), Gaps = 7/488 (1%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDV-CNSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
E K++H ++ L Q + K+I + +S L +A LLF V P+ +LYN M R Y
Sbjct: 3 EAKRLHAHLITSGLHQQENHLRKLITLYTSSSSSLHHARLLFDAVYHPSTYLYNTMFRVY 62
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG 147
+ A+ L++ M R PD +T PF++K+C+ L G+++H KFG
Sbjct: 63 AASPTPLHALLLHRHMFRHGPP-----PDTYTFPFLLKACSALAHLLKGQELHCQALKFG 117
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
L H EN+L+ LYG + A +VF+ M RDI +W L++ YA ++ AR +FD
Sbjct: 118 LGGHVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFD 177
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
+MP ++VS++AM++ Y + EAL++FR++ V IEP + ++SVL ACA LG+L++
Sbjct: 178 EMPERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDV 237
Query: 268 GEWIHMY-CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
G W++ + C + I ALI+M+ KCG I A +F+ E+ V W+ ++ GLA
Sbjct: 238 GRWVYSFVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLA 297
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
HG + I F +M + P+++TF+ LLS C+H+G NEGL YFD M+ D +E +
Sbjct: 298 MHGLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTV 357
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
EH+GC+VDLLGRAG +DQA+ +I EMP +P+A IWG+LL++CR Y N+E+ +A + L+
Sbjct: 358 EHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEVGELAAQWLIK 417
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
EP + Y+ L ++Y + GRW++V +++ ++ +K PGCSLIEV EFV GD
Sbjct: 418 DEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDK 477
Query: 507 TKPFLKDI 514
+ P +I
Sbjct: 478 SHPCAVEI 485
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/484 (38%), Positives = 298/484 (61%), Gaps = 9/484 (1%)
Query: 26 NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
N+ E K I+ Q+ + + SN MI + G + A LF ++ E ++ ++A+I
Sbjct: 159 NVEEAKHIYHQMPERSIIASN----SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIA 214
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
+ N +Y AI + M + G ++ D+ + +CA LL ++GK IH+ K
Sbjct: 215 CFQQNEMYEEAIRTFVGM---HKIGVMV--DEVVAVSALSACANLLVVNMGKLIHSLSLK 269
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
G +S+ +NAL+ +Y KC +++ A K+F+E D+++WN++ISGY + + A+ +
Sbjct: 270 IGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAI 329
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
FD MP +VSW++MISGY + E L +F++MQM G +PDE ++VSV+ ACA+L +L
Sbjct: 330 FDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAAL 389
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
E G+W+H Y +N L ++ LI+MY+KCGC+ A ++F M+E+ + +W+ +I GL
Sbjct: 390 EQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGL 449
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A +G ++ +F M++ V PN+ITF+G+L AC H G +EG +F SM DH I+
Sbjct: 450 AMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPN 509
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
++HYGC+VDLLGRAG+L +A ++ MPM PD WG+LL +C+ + + E+ L+
Sbjct: 510 VKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLI 569
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
L+P+ G +VLLSNIYA G+W+DV +R ++ + K PGCS+IE N + EF++GD
Sbjct: 570 ELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGD 629
Query: 506 DTKP 509
T P
Sbjct: 630 KTHP 633
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 197/425 (46%), Gaps = 71/425 (16%)
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
Y +F ++ N F++N MIRAY + A LYK ML + + D +T P +
Sbjct: 30 YTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSN-----YLGADNYTYPLL 84
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
I++C+ KQ+H HV K G S N L++ + C + +A +VF E + D
Sbjct: 85 IQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDS 144
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTI----------------------------- 214
V+WN++++GY +G +++A+ ++ +MP +I
Sbjct: 145 VSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEK 204
Query: 215 --VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
V+W+A+I+ + Y EA+ F M +G+ DE+ VS L ACA L + +G+ IH
Sbjct: 205 DMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIH 264
Query: 273 --------------------MYC------------DKNHLLRRTVICNALIEMYIKCGCI 300
MY D+ +LL + N++I Y+KC +
Sbjct: 265 SLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLL-DLISWNSMISGYLKCNLV 323
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+ A +FD M E+DVVSWS++I G A + + + LF EMQ P++ T + ++SAC
Sbjct: 324 DNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISAC 383
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
A +G +KR+ + + L+D+ + G ++ AL + M ++
Sbjct: 384 ARLAALEQGKWVHAYIKRN-GLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGIST 441
Query: 421 WGSLL 425
W +L+
Sbjct: 442 WNALI 446
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/495 (38%), Positives = 296/495 (59%), Gaps = 8/495 (1%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F+ +LQ+ + L ++ +IH + +L ++ + + A +F+Q+ P+
Sbjct: 133 FLFLLQASKFLSQVMQIHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPD 192
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+N MI Y A+ +M+ G + PD+FT+ ++ C L LG
Sbjct: 193 AVSFNIMIFGYAKKGHNIEALKFLHEMV-----GLGLKPDEFTMLGLLICCGRLGDAQLG 247
Query: 137 KQIHAHVCKFGL--KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
K +HA + + GL S+ I NALLD+Y KC EL A +F + +D ++WN +I+GYA
Sbjct: 248 KSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYA 307
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
++G ++ A F+ MP +VSW ++I+GY G +F M I PD ++I++
Sbjct: 308 KVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIIN 367
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
++ A A++G+L G WIH + + + + +A I+MY KCG I +A +F ++ E+D
Sbjct: 368 LVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVTEKD 427
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V W+T+I G A HG KA+ LF+EMQ V PN +TF+ +L+AC+H+GF ++GL F+
Sbjct: 428 VTVWTTMITGFAFHGYGSKALQLFYEMQEY-VMPNQVTFVAVLTACSHSGFVSQGLRIFN 486
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
SMK + IE +EHYGCLVDLLGR+GR + ++IE MPMKP IWG++LS+CR Y N+
Sbjct: 487 SMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNI 546
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
EIA IA + LL LEPE G YVLLSNIYA GRW+ ++R+++ S+ +KKT GCS + V
Sbjct: 547 EIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCSSVVV 606
Query: 495 NNEVQEFVSGDDTKP 509
+ + EFV+ D P
Sbjct: 607 DGIIHEFVAADKRHP 621
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 202/448 (45%), Gaps = 89/448 (19%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSGGDLAYASLLFKQ-VKEPN 76
+L+ C K+I QI++ L F ++++I +L A LLF+ PN
Sbjct: 37 LLEKCSTRDHFKQILAQIMRINLIGQTFPMSRLILFSAITHPENLDMAVLLFRHHTPHPN 96
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+++YN MI A + + A Y +L S I P++ T F++++ L S
Sbjct: 97 LYIYNTMISALSLSLNQSFA--FYNSLL-----SSCIYPNRSTFLFLLQASKFL---SQV 146
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
QIH H G + +N L+ +Y + +++ A++VF++M D V++N +I GYA+
Sbjct: 147 MQIHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKK 206
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G EAL +M +G++PDE +++ +L
Sbjct: 207 GH-------------------------------NIEALKFLHEMVGLGLKPDEFTMLGLL 235
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRT--VICNALIEMYIKCGCINQASQLFDQMVERD 314
C +LG +LG+ +H + ++ L++ + ++ NAL++MY+KC + A +F+ +V +D
Sbjct: 236 ICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKD 295
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEM------------------------QRL------ 344
+SW+T+I G A G A + F +M QRL
Sbjct: 296 TISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVA 355
Query: 345 -KVPPNDITFIGLLSACA-----HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
+ P+ +T I L+SA A H G W G + MK D + +D+ +
Sbjct: 356 ENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLG------SAFIDMYWK 409
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLS 426
G + +A + E+ K D +W ++++
Sbjct: 410 CGSIKRACMVFREVTEK-DVTVWTTMIT 436
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/484 (38%), Positives = 298/484 (61%), Gaps = 9/484 (1%)
Query: 26 NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
N+ E K I+ Q+ + + SN MI + G + A LF ++ E ++ ++A+I
Sbjct: 294 NVEEAKHIYHQMPERSIIASN----SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIA 349
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
+ N +Y AI + M + G ++ D+ + +CA LL ++GK IH+ K
Sbjct: 350 CFQQNEMYEEAIRTFVGM---HKIGVMV--DEVVAVSALSACANLLVVNMGKLIHSLSLK 404
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
G +S+ +NAL+ +Y KC +++ A K+F+E D+++WN++ISGY + + A+ +
Sbjct: 405 IGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAI 464
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
FD MP +VSW++MISGY + E L +F++MQM G +PDE ++VSV+ ACA+L +L
Sbjct: 465 FDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAAL 524
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
E G+W+H Y +N L ++ LI+MY+KCGC+ A ++F M+E+ + +W+ +I GL
Sbjct: 525 EQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGL 584
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A +G ++ +F M++ V PN+ITF+G+L AC H G +EG +F SM DH I+
Sbjct: 585 AMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPN 644
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
++HYGC+VDLLGRAG+L +A ++ MPM PD WG+LL +C+ + + E+ L+
Sbjct: 645 VKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLI 704
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
L+P+ G +VLLSNIYA G+W+DV +R ++ + K PGCS+IE N + EF++GD
Sbjct: 705 ELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGD 764
Query: 506 DTKP 509
T P
Sbjct: 765 KTHP 768
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 185/404 (45%), Gaps = 71/404 (17%)
Query: 85 RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
RAY + A LYK ML + + D +T P +I++C+ KQ+H HV
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSN-----YLGADNYTYPLLIQACSIRRSEWEAKQVHNHVL 240
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
K G S N L++ + C + +A +VF E + D V+WN++++GY +G +++A+
Sbjct: 241 KLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKH 300
Query: 205 LFDKMPYTTI-------------------------------VSWTAMISGYTHIGSYAEA 233
++ +MP +I V+W+A+I+ + Y EA
Sbjct: 301 IYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEA 360
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH--------------------M 273
+ F M +G+ DE+ VS L ACA L + +G+ IH M
Sbjct: 361 IRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYM 420
Query: 274 YC------------DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
Y D+ +LL + N++I Y+KC ++ A +FD M E+DVVSWS++
Sbjct: 421 YSKCGDIMVARKLFDEAYLL-DLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSM 479
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I G A + + + LF EMQ P++ T + ++SACA +G +KR+
Sbjct: 480 ISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRN-G 538
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ + L+D+ + G ++ AL + M ++ W +L+
Sbjct: 539 LTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 581
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 307/494 (62%), Gaps = 20/494 (4%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SG--GDLAYASLLFKQVKE 74
V +L C++L EL++IH Q++K L F V+++I C+ SG G L YAS +F +++
Sbjct: 10 VSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQH 69
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
PN F++ A+I+ +++ ++ LY +ML S + +F++P V+K+C LL
Sbjct: 70 PNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGV---EFSIPSVLKACGKLLAFD 126
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+Q+H V K L N+++ +Y E+ A +VF+ M +RD+V+WN++I+GY
Sbjct: 127 EGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+ G+++ A LFD+MP +VS AMI GY ++M +G+ PD +IVS
Sbjct: 187 KAGEIELASELFDEMPERDLVSCNAMIDGYG------------KEMLSLGLRPDGPAIVS 234
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHL-LRRTVICNALIEMYIKCGCINQASQLFDQMV-E 312
VL A A LG +E G+W+H Y N + L I +ALI+MY KCG I A +F +
Sbjct: 235 VLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHR 294
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
R++ W+++I GLA HG A +A+ +F EM+R+ + PN+ITF+GLLS C+H G EG Y
Sbjct: 295 RNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFY 354
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F+SM + I +I+HYGC++DL GRAGRL+ AL +I+ MP + D W ++LS+ +
Sbjct: 355 FESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG 414
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
++EI A + L P+D+ +YVLLSNIYAK GRW+DV+++R ++R + +KK GCS +
Sbjct: 415 HIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSM 474
Query: 493 EVNNEVQEFVSGDD 506
VN +V EF+ G +
Sbjct: 475 LVNGKVHEFLLGKE 488
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/567 (37%), Positives = 309/567 (54%), Gaps = 71/567 (12%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
L C NL + +IH Q+LK L Q F+ K+I + LA A +F V PNV LY
Sbjct: 28 LHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLY 87
Query: 81 NAMIRAYTNNHLY-GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
N++IRA+ +N + L N + QM ++ + PD FT PF++K+C+G L + I
Sbjct: 88 NSIIRAHAHNSSHRSLPFNAFFQMQKNG-----LFPDNFTYPFLLKACSGPSSLPLVRMI 142
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCD--------------------------------- 166
HAHV K G N+L+D Y +C
Sbjct: 143 HAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCG 202
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGY-- 224
EL A K+F+EM DRD+V+WN ++ GYA+ G+M A LF++MP+ IVSW+ M+ GY
Sbjct: 203 ELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSK 262
Query: 225 -----------------------THIGSYAE------ALDVFRQMQMVGIEPDEISIVSV 255
T I YAE A +++ +M+ G+ PD+ ++S+
Sbjct: 263 GGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSI 322
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD-QMVERD 314
L ACA+ G L LG+ IH + + NA I+MY KCGC++ A +F M ++D
Sbjct: 323 LAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKD 382
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VVSW+++I G A HG KA+ LF M + P+ TF+GLL AC H G NEG YF
Sbjct: 383 VVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFY 442
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
SM++ + I ++EHYGC++DLLGR G L +A ++ MPM+P+A I G+LL++CR ++++
Sbjct: 443 SMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDV 502
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
++A E L LEP D GNY LLSNIYA+ G W +V+ +R +++ +K G S IEV
Sbjct: 503 DLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEV 562
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLELL 521
EV EF D + P DI+ +++ L
Sbjct: 563 EEEVHEFTVFDQSHPKSDDIYQMIDRL 589
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 319/586 (54%), Gaps = 85/586 (14%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLV--TKMIDVCNSG--GDLAYASLLFKQV 72
F+ LQ+C+++ LK+IH I+K + S L T++ +C D YA L Q+
Sbjct: 25 FLSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQL 84
Query: 73 KEPNVFLYNAMIRAYT---NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ PN+ LYNA+IR N+ + GL + YKQML I+PD +T+PFV+K+CA
Sbjct: 85 RTPNLPLYNAIIRGLATSNNDSIEGLVV--YKQMLSKG-----IVPDNYTIPFVLKACAE 137
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
G+++H K GL S N L+ +Y CD + A KVF+ RD+V+W +
Sbjct: 138 SRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTM 197
Query: 190 ISGYARLGQMKKARMLF----------DKMPYTTIVS----------------------- 216
I GY ++G ++ LF D M ++S
Sbjct: 198 IQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSN 257
Query: 217 -------WTAMISGYTHIGSYAEALDVFRQM----------------------------- 240
A++ Y G A VF++M
Sbjct: 258 VNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFR 317
Query: 241 --QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
Q +G++PD++++V+VL +CA LG LELG+W+H Y D+N + I NAL++MY KCG
Sbjct: 318 KMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCG 377
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I+QA +F M +DV S++ +I GLA HG+ KA+ LF EM ++ + P+++TF+G+L+
Sbjct: 378 SIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLT 437
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H G EG YF+ M +++ ++EHYGC+VDLLGRAG +++A I MP++PDA
Sbjct: 438 ACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDA 497
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
+ G+LL +C+ + +E+ M+ + +EP G YVL+SNIY+ RW D ++RK +
Sbjct: 498 FVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 557
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
+ ++++KTPGCS IE++ + EF GD + P +K+I+ LL+ + H
Sbjct: 558 KERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSH 603
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/503 (38%), Positives = 299/503 (59%), Gaps = 28/503 (5%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA-----YASLLFKQVKEPNVFL 79
EN+ L+ + +Y+ +++ C+ G D A+L+ + + L
Sbjct: 5 ENIPPLRDAMVVVRRYV---------ELLSRCSGGADARPIARIQAALVTSGLLRRSAEL 55
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS----- 134
++A+IRA+ ++ A+ LY ++R + + P TLP ++KS A L P+
Sbjct: 56 HDALIRAHASSGRPQAALPLYAHLIR-----AGLFPTPHTLPSLLKSLA--LSPAVPGAR 108
Query: 135 -LGKQIHAHVCKFGLKSHSITENALLDLY-GKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
L +HAH + GL + NAL+ ++ G L +AH + D +N LI+
Sbjct: 109 RLALAVHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITA 168
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+AR G++ AR LFD+MP VSW+AM++GY G EAL VF QMQ G+ PD+ +
Sbjct: 169 HARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVL 228
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V VL ACAQLG+LE G+W+H Y N++ + AL++MY KCG + ++F+ M +
Sbjct: 229 VGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKD 288
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
++V++W+T+I GLA HG+ ++ LF +M+ V P+DI FIG L AC HTG ++G
Sbjct: 289 KNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGREL 348
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F+SM ++ I+ KIEHYGC+VDLL R G L +A +++E+MPMKPDA IWG+L++ CR +
Sbjct: 349 FNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHK 408
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N+E+A ++H + LEP+ +G YVLL NIY+ GR +R L+R K ++KTPGCS +
Sbjct: 409 NVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNV 468
Query: 493 EVNNEVQEFVSGDDTKPFLKDIF 515
E+ + +F+ GD + P +KDI
Sbjct: 469 EIKGVIHQFIVGDLSHPRIKDIL 491
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 3 ARIGALSIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSG 59
+++ A ++ + V +L +C L L++ +H + + + FL T ++D+
Sbjct: 214 SQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKC 273
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G++ +F+ +K+ NV + MI+ + ++ L+ QM S + PD
Sbjct: 274 GEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQM-----ESSGVKPDDIA 328
Query: 120 LPFVIKSCAGLLCPSLGKQI-HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+ +C G+++ ++ V +G+K ++DL + L EA + E+M
Sbjct: 329 FIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKM 388
Query: 179 TDR-DIVAWNNLISG 192
+ D + W L++G
Sbjct: 389 PMKPDALIWGALMAG 403
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/530 (36%), Positives = 310/530 (58%), Gaps = 12/530 (2%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +L S E+++IH ++ + + LV + + L YA+ + + ++P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+F N+MIRA+ + + + + Y+++L +G+ + PD +T+ F++++C GL
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILS---SGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G Q+H + G + + L+ LY + L HKVF + D V +++ AR
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + AR LF+ MP ++W AMISGY +G EAL+VF MQ+ G++ + ++++SV
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L AC QLG+L+ G W H Y ++N + + L+++Y KCG + +A ++F M E++V
Sbjct: 247 LSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
+WS+ + GLA +G K + LF M++ V PN +TF+ +L C+ GF +EG +FDS
Sbjct: 307 YTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDS 366
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+ + IE ++EHYGCLVDL RAGRL+ A++II++MPMKP A +W SLL + R Y NLE
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLE 426
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ V+A + +L LE + G YVLLSNIYA W++VS +R+ ++SK ++K PGCS++EVN
Sbjct: 427 LGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVN 486
Query: 496 NEVQEFVSGDDTKP-------FLKDIFWLLELLALHQDRAKDVIDIMYED 538
EV EF GD + P KDI L L D + DI E+
Sbjct: 487 GEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEE 536
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/499 (38%), Positives = 305/499 (61%), Gaps = 4/499 (0%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMID-VCNSGGDLAYASLLFKQVKEPNVFLYNA 82
C + ELK+IH ++K L ++++ C S D YA L+F ++ N F++N
Sbjct: 35 CSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASPSDRNYAYLVFTRINHKNPFVWNT 94
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+IR ++ + +AI+++ ML + + P + T P V K+ A L G+Q+H
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPS---VKPQRLTYPSVFKAYASLGLARDGRQLHGR 151
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V K GL+ S N +L +Y C L+EA ++F M D+VAWN++I G A+ G + +A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCGLIDQA 211
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
+ LFD+MP VSW +MISG+ G + +AL++FR+MQ ++PD ++VS+L ACA L
Sbjct: 212 QKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYL 271
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
G+ E G WIH Y +N +++ ALI+MY KCGC + ++F+ + + W+++I
Sbjct: 272 GASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMI 331
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
GLAN+G +A+ LF E++R + P+ ++FIG+L+ACAH+G ++ +F M+ + I
Sbjct: 332 LGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMI 391
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
E I+HY C+V++LG AG LD+A +I++MP++ D IW SLL++CR N+E+A A
Sbjct: 392 EPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEMAKRAAN 451
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
L L+P++T YVL+SN YA +G +E+ R L++ + M+K GCS IEV+ EV EFV
Sbjct: 452 CLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFV 511
Query: 503 SGDDTKPFLKDIFWLLELL 521
S P +I+ LL +L
Sbjct: 512 SCGKKHPKSTEIYSLLGIL 530
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/512 (39%), Positives = 300/512 (58%), Gaps = 42/512 (8%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN--SGGDLAYASLLFKQ 71
E + +LQ+C L +L +IHT ILK L + ++TK + + D A AS LF
Sbjct: 29 EQNCLALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYA-ASFLFSA 87
Query: 72 VKEP---NVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+ + FL+N +IRAY H A+ LY ML D ILP+KFT PFV+K+C
Sbjct: 88 EADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDA-----ILPNKFTYPFVLKAC 142
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
AGL +LG+ +H V KFG +N ++ +Y C
Sbjct: 143 AGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCC---------------------- 180
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
G + AR +FD+MP + V+W+AMI GY +G EA+ +FR+MQM + P
Sbjct: 181 --------AGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCP 232
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
DEI++VS+L AC LG+LELG+WI Y +++ + + + NALI+M+ KCG I++A +LF
Sbjct: 233 DEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLF 292
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
M E+ +VSW++VI G+A HG+ +A LF EM V P+D+ FIGLLSAC+H+G
Sbjct: 293 RAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVE 352
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
G YF SM + + + KIEHYGC+VD+ R G + +AL + MP++P+ I +L+S+
Sbjct: 353 RGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSA 412
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR + ++ + L+ EP NYVLLSNIYAK WE +++R+++ K MKK P
Sbjct: 413 CRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVP 472
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
G ++IE++NE+ EFV+GD + K+I+ +++
Sbjct: 473 GSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVD 504
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 299/522 (57%), Gaps = 39/522 (7%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+ +E + ILQ+C L +L ++HT I+K + ++TK ++ + YA L
Sbjct: 4 RAVEQPCLDILQACNTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVF 63
Query: 71 QVKEPNV---FLYNAMIRAYT-NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
V++ V FL++ +IRAY ++ AI Y ML G I P+K+ PFV+K+
Sbjct: 64 SVEDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLML-----GYGISPNKYAFPFVLKA 118
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
CAGL +LGK +H + KFG +N ++ +Y C
Sbjct: 119 CAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCS-------------------- 158
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
G M+ AR LFD+MP V+WTAMI GY +G A A+ +FR+MQ+ G+
Sbjct: 159 ----------GGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVC 208
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD++++VSVL AC LG+LELG+WI Y +K +L+ + NAL++M+ KCG +++A L
Sbjct: 209 PDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGL 268
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F M +R +VSW++VI GLA HG+ +A+ LF EM+ + P DI FIGLLSAC+H+G
Sbjct: 269 FRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLV 328
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
G YF M R I KIEHYGC+VDLL RAG + +AL +E MP++P+ IW +L+S
Sbjct: 329 ERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLIS 388
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+CR + L++ + L+ EP NYVLLSNIY K WE S++R + K ++K
Sbjct: 389 ACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKV 448
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
PG ++IE++NE+ EF+ GD + +I ++ + RA
Sbjct: 449 PGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRA 490
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/498 (38%), Positives = 294/498 (59%), Gaps = 11/498 (2%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA-SLLFKQVKEPNVFL 79
LQ C +ELK+IH ++LK L Q + +TK + C S +YA + F P+ FL
Sbjct: 18 LQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFL 77
Query: 80 YNAMIRAYTNNHLYGLAINLYKQML--RDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+N MIR + + ++ LY +ML P + +T PF++K+C+ L
Sbjct: 78 WNLMIRGLSCSDQPDRSLLLYHRMLCCSAPH-------NAYTFPFLLKACSNLSAFQETT 130
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIHAH+ KFG N+L++ Y AH +F+ + + D V+WN++I GY + G
Sbjct: 131 QIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAG 190
Query: 198 QMKKARMLFDKMP-YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+M A LF KMP +SWT MISGY G EAL +F +MQ + PD +S+ S L
Sbjct: 191 EMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASAL 250
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+QLG+LE G+WIH Y +K +V+C LI+MY KCG + +A +F M + V
Sbjct: 251 SACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQ 310
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
W+ +I G A HG +AI F EMQ + V PN ITF +L+AC++TG EG F+++
Sbjct: 311 VWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTI 370
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+RD++++ IEHYGC+VDLLGRAG L++A I++MP+KP+A IWGSLL +C+ + N+E+
Sbjct: 371 ERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIEL 430
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
E L+ ++ G YV ++NI+A +W+ + R+L+R + + K PGCS I +
Sbjct: 431 GEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEG 490
Query: 497 EVQEFVSGDDTKPFLKDI 514
EF++GD + +++I
Sbjct: 491 TTHEFLAGDRSHAEIQEI 508
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/530 (38%), Positives = 311/530 (58%), Gaps = 16/530 (3%)
Query: 14 EDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F L +C L++L ++H + K S ++ + +ID+ + G +A A +F
Sbjct: 147 EYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFS 206
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ E N+ +N++I Y N A+ ++ +M+ S + PD+ TL V+ +CA L
Sbjct: 207 GMIERNLVTWNSLITCYEQNGPASEALEVFVRMM-----DSGLEPDEVTLASVVSACASL 261
Query: 131 LCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
G QIHA V K + + NAL+D+Y KC ++ EA +VF+ M+ R++V+ ++
Sbjct: 262 CALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSM 321
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+SGYAR +K AR +F KM +VSW A+I+GYT G EAL +FR ++ I P
Sbjct: 322 VSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTH 381
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT------VICNALIEMYIKCGCINQA 303
+ ++L ACA L L LG H + K ++ + N+LI+MY+KCG I
Sbjct: 382 YTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDG 441
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
S++F++M ERD VSW+ +I G A +G +A+ +F +M P+ +T IG+L AC+H
Sbjct: 442 SRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHA 501
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G EG YF SM+ I K +HY C+VDLLGRAG L++A N+IE MP+ PDA +WGS
Sbjct: 502 GLVEEGRHYFFSMEEHGLIPLK-DHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGS 560
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL++C+ + N+E+ A E LL ++P ++G YVLLSN+YA+ GRW DV R+RKL+R + +
Sbjct: 561 LLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGV 620
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
K PGCS IEV + V F+ D + P K I+ +L++L R + D
Sbjct: 621 TKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 670
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 179/375 (47%), Gaps = 4/375 (1%)
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
L LP+ ++ SC + +HA + +N L+D+YGKCD L +A
Sbjct: 10 LYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDA 69
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
K+F+ M R+ WN+LIS + G + +A LF MP SW +M+SG+ +
Sbjct: 70 RKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFE 129
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
E+L+ F +M +E S S L ACA L L +G +H K+ + +ALI
Sbjct: 130 ESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALI 189
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
+MY KCG + A ++F M+ER++V+W+++I +G A +A+ +F M + P+++
Sbjct: 190 DMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEV 249
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T ++SACA EGL + + + + LVD+ + ++++A + +
Sbjct: 250 TLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDR 309
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
M ++ S S Y+ A + + ++ L Y ++G E+
Sbjct: 310 MSIRNVV----SETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365
Query: 472 SRMRKLIRSKSMKKT 486
R+ +L++ +S+ T
Sbjct: 366 LRLFRLLKRESIWPT 380
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 207/481 (43%), Gaps = 110/481 (22%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L SC + + +H +IL S F+ ++IDV L A LF ++
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR------DPRTGSLILPDKF--TLPFVIK 125
+ N F +N++I T + A L+ M + D+F +L + +K
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 126 ------------------SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
+CAGL+ ++G Q+HA V K + +AL+D+Y KC
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+ A +VF M +R++V WN+L I+ Y
Sbjct: 198 VACAEEVFSGMIERNLVTWNSL-------------------------------ITCYEQN 226
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT-VI 286
G +EAL+VF +M G+EPDE+++ SV+ ACA L +L+ G IH K + R V+
Sbjct: 227 GPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVL 286
Query: 287 CNALIEMYIKCGCINQASQLFD-------------------------------QMVERDV 315
NAL++MY KC +N+A ++FD +M +R+V
Sbjct: 287 GNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV 346
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC-----------AHTG 364
VSW+ +I G +G+ +A+ LF ++R + P TF LLSAC AHT
Sbjct: 347 VSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTH 406
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+G + + D + + L+D+ + G ++ + E+M + D W ++
Sbjct: 407 VLKQGFEFQSGAESDIFVGNS------LIDMYMKCGSIEDGSRVFEKMKER-DCVSWNAI 459
Query: 425 L 425
+
Sbjct: 460 I 460
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/493 (37%), Positives = 295/493 (59%), Gaps = 9/493 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN--VFLYNAMIRAYT 88
K +H +K F++ +I S G L A L+F+ ++ N + +N+M+ +
Sbjct: 260 KAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFV 319
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
A++L+++M + + P+ T+ V+ +CA + +LG+++ ++ + +
Sbjct: 320 QGGYPDKALDLFERMRNEG-----VHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEM 374
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ NA +D++ KC E+ A +F+ M RD+V+W +I GYA++ + AR +FD
Sbjct: 375 MMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDS 434
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV--GIEPDEISIVSVLPACAQLGSLE 266
MP I +W +ISGY G EAL +FR++Q+ G PD+++++S L ACAQLG+++
Sbjct: 435 MPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMD 494
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
+GEWIH Y K + + +LI+MY K G + +A ++F + +DV WS +I GLA
Sbjct: 495 IGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLA 554
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
HG+ AI LF +MQ +V PN +TF LL AC+H+G +EG FD M+R + + K
Sbjct: 555 MHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKT 614
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
+HY C+VD+LGRAG L++AL IE MP+ P A +WG+LL +C + NLE+A A LL
Sbjct: 615 KHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLE 674
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
+EP + G YVLLSN+YAK G WE VS +R+ +R +KK GCS IE++ V EF+ GD+
Sbjct: 675 IEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDN 734
Query: 507 TKPFLKDIFWLLE 519
P +DI+ L+
Sbjct: 735 AHPLSRDIYAKLD 747
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 217/456 (47%), Gaps = 74/456 (16%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
+ Q C + +LK+IH Q+L+ + +++ +S L YA +F Q+ +PN+
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNL 204
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+ +N +IRA + ++ ++ +ML D G P+KFT P +IK+ A C +GK
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRMLHDSPFG----PNKFTFPVLIKAVAERRCFLVGK 260
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE--EMTDRDIVAWNNLISGYAR 195
+H K N+L+ Y C L A+ VFE E ++DIV+WN++++G+ +
Sbjct: 261 AVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQ 320
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G K ALD+F +M+ G+ P+ +++VSV
Sbjct: 321 GGYPDK-------------------------------ALDLFERMRNEGVHPNAVTMVSV 349
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ ACA+ +L LG + Y D+N ++ +CNA I+M++KCG + A LFD M +RDV
Sbjct: 350 MSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDV 409
Query: 316 VSWSTVIGGLA-------------------------------NHGKAHKAIHLFHEMQRL 344
VSW+T+I G A G+ +A+ +F E+Q
Sbjct: 410 VSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLT 469
Query: 345 K--VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
K P+ +T + LSACA G + G +K++ I+ L+D+ ++G +
Sbjct: 470 KSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE-RIQLNRNLATSLIDMYSKSGDV 528
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
++A+ + + K D +W ++++ + E A+
Sbjct: 529 EKAIEVFHSIGNK-DVFVWSAMIAGLAMHGRGEAAI 563
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/413 (43%), Positives = 269/413 (65%)
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
G + P++FTL V+K+CA + GKQ H ++ K G +S + + AL+ +Y +C L
Sbjct: 3 GKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLE 62
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A VF++M++R WN +I+G+A+ MKKA LF +M +VSWTA+I+GY G
Sbjct: 63 DAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGY 122
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
E+L+VF QM+ G++ D + SVL ACA L +LELG H Y ++ V+ +A
Sbjct: 123 GDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSA 182
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
L++MY K G + A Q+FD+M +R+ VSW+++I G A HG+ + A+ LF +M + + PN
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPN 242
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+I+F+G+LSAC+HTG NEG YF+ M +++ I + HY C++DLLGRAG LD+A N I
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
MP++PD +WG+LL +CR + N E+A EHLL +E + G YVLLSNIYA G+W+
Sbjct: 303 NGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWD 362
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
D +++RKL++ + + K PG S IEV + FV+G+ + P LK+I LE L+
Sbjct: 363 DAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLS 415
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/527 (38%), Positives = 308/527 (58%), Gaps = 48/527 (9%)
Query: 14 EDRFVPILQS-CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA-SLLF-- 69
E + +L S C L +L +IH ILK L + ++TK ++ + YA S LF
Sbjct: 17 EQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPP 76
Query: 70 ---KQVKEP--NVFLYNAMIRAYTNNH-LYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
P + FL+N +IRAY+ + Y+ MLR T P+KFT PFV
Sbjct: 77 SHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVT-----PNKFTFPFV 131
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+K CAG+ LGK +H V KFG FEE D+
Sbjct: 132 LKGCAGIGSLRLGKCVHGCVVKFG---------------------------FEE----DV 160
Query: 184 VAWNNLISGYARLGQ--MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
N LI Y LG+ + A +FD P V+W+AMI+G+ +G + A+D+FR+MQ
Sbjct: 161 HVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQ 220
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
++G+ PDEI++VSVL ACA LG+LELG+W+ Y +K ++ + +CNALI+M+ KCG ++
Sbjct: 221 VMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVD 280
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+A +LF QM R +VSW++VI GLA HG+ A+ LF EM + P+D+ FIG+LSAC+
Sbjct: 281 KAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACS 340
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H+G ++G YF SM+R+ I K+EHYGC+VDLL R G + +A +++MP +P+ IW
Sbjct: 341 HSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIW 400
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
+++++C L++ + L+ EP NYVLLSNIYAK +WE +++R+++ +
Sbjct: 401 RTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMR 460
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
MKK PG ++IEVNNE+ EFV+GD + K+I+ +++ + +A
Sbjct: 461 GMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKA 507
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/512 (38%), Positives = 303/512 (59%), Gaps = 12/512 (2%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVK 73
R + +L C N+ +LK+ H Q+LK L SNF+++++++ C + G L++A LF+ ++
Sbjct: 7 RCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQ 66
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
P + ++N MI+A + AI ++ + R+ I PD +TLP+V+K+ A +
Sbjct: 67 HPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNG-----IHPDTYTLPYVLKASARMTNI 121
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+ IHA K G + N+LL +Y D + A +VF+EM + V+W +I GY
Sbjct: 122 HLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGY 181
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A +G + AR LFD W AMISGY + E L +FR MQ+ +EPDE IV
Sbjct: 182 ANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIV 241
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
++L ACA +G+L+ G WIH Y + L + LI+MY KCG ++ A LF++M +R
Sbjct: 242 TILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQR 301
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D V W+ +I G+A G AI LF EM++ + P++ITFI +L+AC+++G +EG+ +
Sbjct: 302 DNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIW 361
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP----DAKIWGSLLSSCR 429
+ M H IE K EHYGC++DLL R GR ++A +I+ +P +A W + LS+C
Sbjct: 362 NRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACC 421
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ + A +A E L LE +G YVLLSN+YA G+ ED R+R +++ K ++K PGC
Sbjct: 422 KHGQTQQAEVAAERLFQLE-RHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGC 480
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
S I+VN V EF++G+ T + +I +LE L
Sbjct: 481 SSIKVNGVVNEFIAGEKTHRHIDNIHLVLEEL 512
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/485 (38%), Positives = 294/485 (60%), Gaps = 13/485 (2%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L Y+ LF + + P+VF + A+I + L+ A+N Y QML + P+ FT
Sbjct: 23 GRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQG-----VEPNAFT 77
Query: 120 LPFVIKSCAGLLCP-SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
++K LCP GK +H+ K G S LLD+Y + +++ A ++F+ M
Sbjct: 78 FSSILK-----LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTM 132
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
++ +V+ +++ YA+ G++ AR+LFD M V W MI GYT G EAL +FR
Sbjct: 133 PEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFR 192
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+M +P+E++++SVL AC QLG+LE G W+H Y + N + + AL++MY KCG
Sbjct: 193 RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ A +FD++ ++DVV+W+++I G A G + +A+ LF M R+ + P +ITFIG+LS
Sbjct: 253 SLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILS 312
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC H+G+ EG F+ MK ++ IE KIEHYGC+V+LLGRAG ++QA +++ M ++PD
Sbjct: 313 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 372
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
+WG+LL +CR + + + +E L+ ++G Y+LLSNIYA G W+ V+R+R ++
Sbjct: 373 VLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMM 432
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA--LHQDRAKDVIDIMY 536
+ +KK PGCS IEVNN+V EF++G P K+I+ +LE + L DI+
Sbjct: 433 KDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVL 492
Query: 537 EDIGE 541
DIGE
Sbjct: 493 HDIGE 497
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 179/407 (43%), Gaps = 86/407 (21%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS---------- 66
F IL+ C + K +H+Q +K ++ T ++DV GGD+ A
Sbjct: 78 FSSILKLCP-IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKS 136
Query: 67 ---------------------LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR 105
+LF ++E + +N MI YT N + A+ L+++ML+
Sbjct: 137 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 196
Query: 106 DPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
P++ T+ V+ +C L G+ +H+++ G++ + AL+D+Y KC
Sbjct: 197 AKAK-----PNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKC 251
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP----YTTIVSWTAMI 221
L +A VF+++ D+D+VAWN++I GYA G ++A LF M + T +++ ++
Sbjct: 252 GSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGIL 311
Query: 222 SGYTHIGSYAEALDVFRQMQ-MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
S H G E D+F +M+ GIEP +E H C
Sbjct: 312 SACGHSGWVTEGWDIFNKMKDEYGIEP----------------KIE-----HYGC----- 345
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGK---AHKAIH 336
++ + + G + QA +L M +E D V W T++G HGK K +
Sbjct: 346 ---------MVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVE 396
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
L + Q L N T+I L + A G W +G+ +M +D ++
Sbjct: 397 LLVD-QNL---ANSGTYILLSNIYAAVGNW-DGVARLRTMMKDSGVK 438
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 37/273 (13%)
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
V + L YA LG++ + LF + ++ WTA+I G+ G + +AL+ + QM
Sbjct: 10 VPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQ 69
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK----NHLLRRT--------------- 284
G+EP+ + S+L C +E G+ +H K + L RT
Sbjct: 70 GVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSA 125
Query: 285 ------------VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
V A++ Y K G ++ A LFD M ERD V W+ +I G +G +
Sbjct: 126 QQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPN 185
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+A+ LF M + K PN++T + +LSAC G G + S ++ I+ + L
Sbjct: 186 EALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG-RWVHSYIENNGIQFNVHVGTAL 244
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
VD+ + G L+ A + +++ K D W S++
Sbjct: 245 VDMYSKCGSLEDARLVFDKIDDK-DVVAWNSMI 276
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/504 (38%), Positives = 305/504 (60%), Gaps = 11/504 (2%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE-P 75
FV +L+ +L ++K+IH Q++ + L+Q+ L+ +I +L++A ++F Q P
Sbjct: 58 FVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLP 117
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
++N MI+AY+ ++ L+ QML R S DK+T FV +C+ P+L
Sbjct: 118 PTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTS---ADKYTFTFVFTACS--RHPTL 172
Query: 136 ---GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
G+ +H V K G +S N+L+++Y +++A +VF+EM RD++ W +++ G
Sbjct: 173 RGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKG 232
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEIS 251
YA G++ +AR LFD MP VSW M++GY Y EAL F M ++P+E
Sbjct: 233 YAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAV 292
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VS+L ACA LG+L+ G+WIH+Y DKN +L + I ALI+MY KCG I+ A ++FD +
Sbjct: 293 LVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLH 352
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+RD+++W+++I GL+ HG + + F EM P+DIT +G+L+ C+H+G EGL
Sbjct: 353 KRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLS 412
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
F M I K+EHYGCL+DLLGRAGRL+ A I+ MPM+PD W +LLS+CR +
Sbjct: 413 IFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIH 472
Query: 432 SNLEIAVIAMEHLLVLEP-EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
++++ + H+ L P G YVLLSN+YA G+WE V+++RK + + + PGCS
Sbjct: 473 GDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCS 532
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDI 514
IE++ V EF++ D P + +I
Sbjct: 533 WIEIDGVVHEFLAADKLHPRISEI 556
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/504 (38%), Positives = 302/504 (59%), Gaps = 38/504 (7%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS-LLFK--QVKEP---NVFLYNAMIR 85
+IH+ ILK L + ++TK + + YAS +LF Q P + FL+N +IR
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199
Query: 86 AYT-NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
A+ H A+ Y M R + P+KFT PFV+K+CAG++ LG +HA +
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHA-----VSPNKFTFPFVLKACAGMMRLELGGAVHASMV 254
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
KFG + N L+ +Y C + + V A+
Sbjct: 255 KFGFEEDPHVRNTLVHMYCCCCQDGSSGPV--------------------------SAKK 288
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+FD+ P V+W+AMI GY G+ A A+ +FR+MQ+ G+ PDEI++VSVL ACA LG+
Sbjct: 289 VFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGA 348
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
LELG+W+ Y ++ +++R +CNALI+M+ KCG +++A ++F +M R +VSW+++I G
Sbjct: 349 LELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVG 408
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA HG+ +A+ +F EM V P+D+ FIG+LSAC+H+G ++G YF++M+ I
Sbjct: 409 LAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVP 468
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
KIEHYGC+VD+L RAGR+++AL + MP++P+ IW S++++C L++ + L
Sbjct: 469 KIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKEL 528
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
+ EP NYVLLSNIYAK RWE +++R+++ K M+K PG ++IE+NNE+ EFV+G
Sbjct: 529 IRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAG 588
Query: 505 DDTKPFLKDIFWLLELLALHQDRA 528
D + K+I+ ++E + RA
Sbjct: 589 DKSHDQYKEIYEMVEEMGREIKRA 612
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 144/324 (44%), Gaps = 46/324 (14%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQS----NFLVTKMIDVCNSGGD-LAYASLL 68
F +L++C ++ L+ +H ++K+ + N LV C G A +
Sbjct: 230 FPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKV 289
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F + + ++AMI Y A+ L+++M TG + PD+ T+ V+ +CA
Sbjct: 290 FDESPVKDSVTWSAMIGGYARAGNSARAVTLFREM---QVTG--VCPDEITMVSVLSACA 344
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
L LGK + +++ + + NAL+D++ KC
Sbjct: 345 DLGALELGKWLESYIERKNIMRSVELCNALIDMFAKC----------------------- 381
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
G + +A +F +M TIVSWT+MI G G EA+ VF +M G++PD
Sbjct: 382 --------GDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPD 433
Query: 249 EISIVSVLPACAQLGSLELGE-WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+++ + VL AC+ G ++ G + + + ++ + +++M + G +N+A +
Sbjct: 434 DVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFV 493
Query: 308 DQM-VERDVVSWSTVIGGLANHGK 330
M VE + V W +++ G+
Sbjct: 494 RAMPVEPNQVIWRSIVTACHARGE 517
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/511 (38%), Positives = 305/511 (59%), Gaps = 19/511 (3%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL--AYASLLFKQVKEPNVF 78
L C NL ++K+IH +L+ L QS +++TK+I G YA + + V+ N F
Sbjct: 56 LDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
L+ A+IR Y + AI +Y M ++ I P FT ++K+C + +LG+Q
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEE-----ITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
HA + N ++D+Y KC+ + A KVF+EM +RD+++W LI+ YAR+G
Sbjct: 171 FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
M+ A LF+ +P +V+WTAM++G+ EAL+ F +M+ GI DE+++ + A
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 290
Query: 259 CAQLGSLELGEWI------HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
CAQLG+ + + Y +H+ VI +ALI+MY KCG + +A +F M
Sbjct: 291 CAQLGASKYADRAVQIAQKSGYSPSDHV----VIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
++V ++S++I GLA HG+A +A+HLFH M + ++ PN +TF+G L AC+H+G ++G
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
FDSM + ++ +HY C+VDLLGR GRL +AL +I+ M ++P +WG+LL +CR +
Sbjct: 407 VFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS- 490
+N EIA IA EHL LEP+ GNY+LLSN+YA G W V R+RKLI+ K +KKTP S
Sbjct: 467 NNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+++ N ++ +F G+ P I LE L
Sbjct: 527 VVDKNGQMHKFFPGNLNHPMSNKIQDKLEEL 557
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/512 (37%), Positives = 303/512 (59%), Gaps = 41/512 (8%)
Query: 9 SIKELEDR-FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
S+K L+ + + +LQ +++ ++ IH Q+++ SQ F+V +++ C+ + YAS
Sbjct: 26 SLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASR 85
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F+ PNV+LY A+I + ++ Y AI LY +ML D ILPD + + ++K+C
Sbjct: 86 IFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDS-----ILPDNYLMASILKAC 140
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
L G+++H+ K GL S+ + +++LYGKC
Sbjct: 141 GSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKC---------------------- 178
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMV 243
G++ AR +F++MP + V WTAMI G+ AL+ FR MQ
Sbjct: 179 ---------GELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGE 229
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
+ P+E +IV VL AC+QLG+LE+G W+H Y K + + NALI MY +CG I++A
Sbjct: 230 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 289
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+FD+M +RDV++++T+I GL+ +GK+ +AI LF M ++ P ++TF+G+L+AC+H
Sbjct: 290 QTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHG 349
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G + G F SM RD+ +E +IEHYGC+VDLLGR GRL++A ++I M M PD + G+
Sbjct: 350 GLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGT 409
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LLS+C+ + NLE+ + L D+G YVLLS++YA G+W++ +++R ++ M
Sbjct: 410 LLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGM 469
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
+K PGCS IEVNNE+ EF+ GD P + I+
Sbjct: 470 QKEPGCSSIEVNNEIHEFLLGDLRHPRKERIY 501
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/544 (38%), Positives = 311/544 (57%), Gaps = 47/544 (8%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
LK +H QI+ + L+ + K+I C + GDL YA +F Q+ +PN F+YN++IR Y
Sbjct: 4 LKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGY 63
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL---GKQIHAHVC 144
+N+ A+ L+++M+ S + P++FTLPFV+K+C C S +H
Sbjct: 64 SNSDDPIDAVLLFRRMI-----CSGLSPNEFTLPFVLKACG---CKSAYWEAVLVHGLAI 115
Query: 145 KFGLKS----------------------------------HSITENALLDLYGKCDELIE 170
K G+ S I NAL+D+Y KC L
Sbjct: 116 KLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHS 175
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
A +F+ ++++V+W ++IS YA+ G ++ AR +FD+MP +VSW +MIS Y G Y
Sbjct: 176 AQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQY 235
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
EALD+F +M+ + PDE ++VS+L AC+QLG L +G+ IH Y N + N+L
Sbjct: 236 REALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSL 295
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND 350
I+MY KCG + A +F +M +++VSW+ +IG LA HG +AI LF EMQ P++
Sbjct: 296 IDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDE 355
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
IT GLLSAC+H+G + GL YFD M + + +IEHY C+VDLLGR G L +A+ +I
Sbjct: 356 ITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIG 415
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
MPMKPD +WG+LL +CR + N+EI ++ LL LEP G YVL+SNIY + RWED
Sbjct: 416 RMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWED 475
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKD 530
V ++RKL+ + +KK S IE++ + EF+ D I+ +L+ L H A
Sbjct: 476 VKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGY 535
Query: 531 VIDI 534
+ +I
Sbjct: 536 LCNI 539
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 14 EDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E V IL +C L +L KKIH IL + L +ID+ G + A +F
Sbjct: 254 EATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFL 313
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
++ N+ +N +I A H GL AI L+++M D LPD+ TL ++ +C+
Sbjct: 314 EMPGKNLVSWNVIIGALA-LHGCGLEAIKLFEEMQADG-----TLPDEITLTGLLSACS 366
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/499 (38%), Positives = 299/499 (59%), Gaps = 41/499 (8%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLL--SQSNFLVTKMIDVC--NSGGDLAYASLLFKQ 71
R +++ C ++ L++IH ++L + + S +F + K+I C + GD+ YA LF Q
Sbjct: 59 RIALLIRKCRSMRVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQ 118
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ PN+F +N+MIR + + + L+++M+R P+ FT+ FV+K+C+ +
Sbjct: 119 IQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPN----PNTFTMAFVLKACSIV 174
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G+Q+HA+V K G S E AL++ Y KC++++ A KVF+E+TDR++VAW+ +I
Sbjct: 175 SALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMI 234
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
SGYAR+G + EAL +FR MQ G+ PDE+
Sbjct: 235 SGYARIGLVN-------------------------------EALGLFRDMQKAGVVPDEV 263
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++VSV+ ACA G+L+ G+W+H Y +K + + AL+ MY KCGCI +A ++FD M
Sbjct: 264 TMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAM 323
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+D +WS++I GLA +G A A+ F M+ KV PN +TFIG+LSACAH+G +EG
Sbjct: 324 PVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGR 383
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
Y+ SM + I +E YGC+VDLL RA ++ A ++E MP+ P+ IW +LL C+
Sbjct: 384 RYWSSM-LEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKK 442
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
NL+ + + + LL LEP + NY+LLSN+YA +WE +S++RK ++ +K PGCS
Sbjct: 443 SKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCS 502
Query: 491 LIEVNNEVQEFVSGDDTKP 509
IEV+ V EFV GD + P
Sbjct: 503 SIEVDGLVHEFVMGDWSHP 521
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/521 (37%), Positives = 307/521 (58%), Gaps = 10/521 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V ++ +C L +L KK+ + I + + S +V ++D+ GD+ A +F +
Sbjct: 234 MVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECA 293
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLILPDKFTLPFVIKSCAGLLC 132
N+ +YN ++ Y ++ + + +ML + PR PDK T+ I +CA L
Sbjct: 294 NKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPR------PDKVTMLSTIAACAQLGD 347
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
S+GK HA+V + GL+ NA++D+Y KC + A KVFE M ++ +V WN+LI+G
Sbjct: 348 LSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAG 407
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
R G M+ A +FD+M +VSW MI + + EA+++FR+MQ GI D +++
Sbjct: 408 LVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTM 467
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V + AC LG+L+L +W+ Y +KN + + AL++M+ +CG + A +F +M +
Sbjct: 468 VGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEK 527
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
RDV +W+ IG +A G AI LF+EM KV P+D+ F+ LL+AC+H G ++G
Sbjct: 528 RDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQL 587
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F SM++ H I I HYGC+VDLLGRAG L++A+++I+ MP++P+ +WGSLL++CR +
Sbjct: 588 FWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHK 647
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N+E+A A E L L PE G +VLLSNIYA G+W DV+R+R ++ K ++K PG S I
Sbjct: 648 NVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSI 707
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
EV + EF SGD++ I +LE + A V D
Sbjct: 708 EVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPD 748
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 212/426 (49%), Gaps = 47/426 (11%)
Query: 20 ILQSCENLIELKKIHTQILKYLL------SQSNFLVTKMIDVCNSGGDLAYASLLF--KQ 71
+L +C+ L ELK++H ++K L S N L+ + + + L YA F
Sbjct: 31 LLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQI-GTLESLDYARNAFGDDD 89
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++F+YN +IR Y + L AI LY QML I+PDK+T PF++ +C+ +L
Sbjct: 90 GNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMG-----IVPDKYTFPFLLSACSKIL 144
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
S G Q+H V K GL+ DI N+LI
Sbjct: 145 ALSEGVQVHGAVLKMGLEG-------------------------------DIFVSNSLIH 173
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
YA G++ R LFD M +VSWT++I+GY+ EA+ +F QM G+EP+ ++
Sbjct: 174 FYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVT 233
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V V+ ACA+L LELG+ + Y + + T++ NAL++MY+KCG I A Q+FD+
Sbjct: 234 MVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECA 293
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+++V ++T++ +H A + + EM + P+ +T + ++ACA G + G
Sbjct: 294 NKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKS 353
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
+ R+ +E ++D+ + G+ + A + E MP K W SL++
Sbjct: 354 SHAYVLRN-GLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKT-VVTWNSLIAGLVRD 411
Query: 432 SNLEIA 437
++E+A
Sbjct: 412 GDMELA 417
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 118/224 (52%), Gaps = 11/224 (4%)
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA------WNNLISGYARLGQMKK- 201
+++ IT N+ L C L E ++ +M + ++ N LI+ ++G ++
Sbjct: 19 EANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESL 78
Query: 202 --ARMLF--DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
AR F D ++ + +I GY G +A+ ++ QM ++GI PD+ + +L
Sbjct: 79 DYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLS 138
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
AC+++ +L G +H K L + N+LI Y +CG ++ +LFD M+ER+VVS
Sbjct: 139 ACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVS 198
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
W+++I G + + +A+ LF +M V PN +T + ++SACA
Sbjct: 199 WTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACA 242
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 322/543 (59%), Gaps = 17/543 (3%)
Query: 7 ALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSGGDLAY 64
A I + + +L C++++ELK++H ++ LSQ + ++K++ ++ GD+ Y
Sbjct: 7 ACKITNISHNLLSLLDKCKSILELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINY 66
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
+ +F Q+ P +F +N +IR Y+N+ +++++ +MLR + PD T PF++
Sbjct: 67 SYRVFSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLG-----VAPDYLTYPFLV 121
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
K+ A LL G +HAH+ K G +S +N+L+ +Y C + A KVF+ + +++V
Sbjct: 122 KASARLLNQETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVV 181
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+WN+++ GYA+ G+M A+ F+ M + SW+++I GY G Y+EA+ +F +MQ G
Sbjct: 182 SWNSMLDGYAKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAG 241
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ +E+++VSV ACA +G+LE G I+ Y N L V+ +L++MY KCG I +A
Sbjct: 242 PKANEVTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
Query: 305 QLFDQM--VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
+F ++ + DV+ W+ VIGGLA HG +++ LF EMQ + + P+++T++ LL+ACAH
Sbjct: 302 LIFRRVSKSQTDVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAH 361
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G E +F+S+ + + EHY C+VD+L RAG+L A I +MP +P A + G
Sbjct: 362 GGLVKEAWFFFESLSK-CGMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLG 420
Query: 423 SLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
+LLS C + NL +A I L+ LEP G Y+ LSN+YA RW+D MR+ + +
Sbjct: 421 ALLSGCINHRNLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRG 480
Query: 483 MKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLEL------LALHQD-RAKDVIDIM 535
+KK+PG S +E++ + F++ D T P ++ +++L L+ H+D + + + D
Sbjct: 481 VKKSPGFSFVEISGVLHRFIAHDKTHPDSEETYFMLNFVVYQMKLSCHEDNQERSLNDTS 540
Query: 536 YED 538
ED
Sbjct: 541 MED 543
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/530 (36%), Positives = 310/530 (58%), Gaps = 12/530 (2%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +L S E+++IH ++ + + LV + + + L YA+ + + +P
Sbjct: 18 ISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILDRSDKP 77
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+F N+MIRA+ + + + + Y ++L +G+ + PD +T+ F++++C GL
Sbjct: 78 TLFALNSMIRAHCKSPVPEKSFDFYSRILS---SGNGLKPDNYTVNFLVQACTGLGMRET 134
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G Q+H + G + + L+ LY + L HKVF ++ D V +++ AR
Sbjct: 135 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACAR 194
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + AR LF+ MP ++W AMISGY +G EAL++F MQ+ G++ + +S++SV
Sbjct: 195 CGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISV 254
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L AC QLG+L+ G W H Y ++N + + L+++Y KCG +++A ++F M E++V
Sbjct: 255 LSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNV 314
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
+WS+ + GLA +G K + LF M++ V PN +TF+ +L C+ GF +EG +FDS
Sbjct: 315 YTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDS 374
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+ + IE +++HYGCLVDL RAGRL+ A++II++MPMK A +W SLL + R Y NLE
Sbjct: 375 MRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLE 434
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ V+A + +L LE + G YVLLSNIYA W++VS +R+ ++SK ++K PGCS++EVN
Sbjct: 435 LGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVN 494
Query: 496 NEVQEFVSGDDTKP-------FLKDIFWLLELLALHQDRAKDVIDIMYED 538
EV EF GD + P KDI L L D + DI E+
Sbjct: 495 GEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKADTTPVMFDIDEEE 544
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 236/468 (50%), Gaps = 49/468 (10%)
Query: 49 VTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLY----GLAINLYKQML 104
+ K + VC GD S++ ++ F ++R H + G ++ +
Sbjct: 573 IVKNLRVC---GDCHQVSMMISKI-----FNREIIVRDRNRFHHFKDGRGYLGKCFEVLS 624
Query: 105 RDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK 164
R R+ P++ T +I +C G IH V K G+ NAL++LYGK
Sbjct: 625 RMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGK 684
Query: 165 CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGY 224
+LI + K LF+ + +VSW MI +
Sbjct: 685 TGDLISSCK-------------------------------LFEDLSVKNLVSWNTMIVIH 713
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH---MYCDKNHLL 281
G E L F + VG++PD+ + ++VL C +G + L + IH M+C N
Sbjct: 714 LQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFN--- 770
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
T I AL+++Y K G + +S +F ++ D ++W+ ++ A HG AI F M
Sbjct: 771 ANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELM 830
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+ P+ +TF LL+AC+H+G EG YF++M + + IE +++HY C+VDL+GR+G
Sbjct: 831 VHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGL 890
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
L A +I+EMPM+P + +WG+LL +CR Y + ++ A + L LEP D NY++LSNI
Sbjct: 891 LQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNI 950
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
Y+ G W+D SR+R L++ K + + G S IE N++ +FV GD + P
Sbjct: 951 YSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHP 998
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 155/375 (41%), Gaps = 52/375 (13%)
Query: 14 EDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F+ ++ +C N E IH ++K + + +V ++++ GDL + LF+
Sbjct: 637 EVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFE 696
Query: 71 QVKEPNVFLYNAMIRAYTNNHLY--GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
+ N+ +N MI + N L GLA Y M R G + PD+ T V++ C
Sbjct: 697 DLSVKNLVSWNTMIVIHLQNGLAEEGLA---YFNMSR--WVG--LKPDQATFLAVLRVCE 749
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
+ L + IH + G +++ ALLDLY K L ++ VF E+T D +AW
Sbjct: 750 DIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAW-- 807
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
TAM++ Y G +A+ F M G+ PD
Sbjct: 808 -----------------------------TAMLAAYATHGYGRDAIKHFELMVHYGLSPD 838
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVICNALIEMYIKCGCINQASQLF 307
++ +L AC+ G +E G + K + + R + ++++ + G + A L
Sbjct: 839 HVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLI 898
Query: 308 DQM-VERDVVSWSTVIGGLANHGKAH---KAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+M +E W ++G + KA E++ P + +I L + + +
Sbjct: 899 KEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELE----PRDGRNYIMLSNIYSAS 954
Query: 364 GFWNEGLMYFDSMKR 378
G W + + MK+
Sbjct: 955 GLWKDASRIRNLMKQ 969
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/502 (37%), Positives = 297/502 (59%), Gaps = 39/502 (7%)
Query: 21 LQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
L+SC + L + + +K L F+++ +I + S GD+A A L+F +E V
Sbjct: 127 LKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGV 186
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++NA++ AY N + + ++K ML G + D+ TL V+ +C + LGK
Sbjct: 187 VMWNAIVAAYLKNGDWMEVVEMFKGMLE---VG--VAFDEVTLVSVVTACGRIGDAKLGK 241
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+ HV + GL + AL+D+Y KC G
Sbjct: 242 WVAGHVDEEGLARNPKLVTALMDMYAKC-------------------------------G 270
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
++ KAR LFD M +V+W+AMISGYT EAL +F +MQ+ +EP+++++VSVL
Sbjct: 271 EIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLS 330
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACA LG+LE G+W+H Y + L T++ AL++ Y KCGCI+ A + F+ M ++ +
Sbjct: 331 ACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWT 390
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G+A +G+ +A+ LF M+ + P D+TFIG+L AC+H+ EG +FDSM
Sbjct: 391 WTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMA 450
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
RD+ I+ ++EHYGC+VDLLGRAG +D+A I MP++P+A IW +LLSSC + N+ I
Sbjct: 451 RDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIG 510
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
A++ ++ L P +G+YVLLSNIYA G+W+D + +RK ++ + ++KTPGCSLIE++
Sbjct: 511 EEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGV 570
Query: 498 VQEFVSGDDTKPFLKDIFWLLE 519
V EF + D P L++I+ +E
Sbjct: 571 VFEFFAEDSDHPELREIYQKVE 592
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 183/371 (49%), Gaps = 38/371 (10%)
Query: 62 LAYASLLFKQVKEP--NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
L YA LF+ P + YN ++RA+ + A++L+ +ML S D+ T
Sbjct: 66 LPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLH---AASACPADQHT 122
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+KSC+ + +G+ + A+ K GL + ++L+ +Y C
Sbjct: 123 AACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASC-------------- 168
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
G + AR++FD + +V W A+++ Y G + E +++F+
Sbjct: 169 -----------------GDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKG 211
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M VG+ DE+++VSV+ AC ++G +LG+W+ + D+ L R + AL++MY KCG
Sbjct: 212 MLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGE 271
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
I +A +LFD M RDVV+WS +I G + +A+ LF EMQ +V PND+T + +LSA
Sbjct: 272 IGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSA 331
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
CA G G + S R + LVD + G +D A+ E MP+K ++
Sbjct: 332 CAVLGALETG-KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK-NSW 389
Query: 420 IWGSLLSSCRT 430
W +L+ T
Sbjct: 390 TWTALIKGMAT 400
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 101/238 (42%), Gaps = 13/238 (5%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V +L +C L L K +H+ + + LS + L T ++D G + A F+ +
Sbjct: 325 MVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMP 384
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
N + + A+I+ N A+ L+ M + I P T V+ +C+
Sbjct: 385 VKNSWTWTALIKGMATNGRGREALELFSSMRE-----AGIEPTDVTFIGVLMACSHSCLV 439
Query: 134 SLGKQIHAHVCK-FGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
G++ + + +G+K ++DL G+ + EA++ M + + V W L+S
Sbjct: 440 EEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLS 499
Query: 192 GYA---RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
A +G ++A + + + + + Y G + +A V ++M+ GIE
Sbjct: 500 SCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIE 557
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 316/521 (60%), Gaps = 15/521 (2%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG----DLAYASLLFKQ 71
R + +L+ C+++ LK+ H Q+ L + F +++++ C+S L YA +F+Q
Sbjct: 7 RCLVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVFEQ 66
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ P V +YN +I+A+ N+ + A+ ++ +ML+ S + PD +T+P+V+K+C
Sbjct: 67 IQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQ-----SELKPDNYTIPYVLKACGTFH 121
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
S GK IH + K GL N+L+ +Y +++ A VF+E+ ++V+W+ +IS
Sbjct: 122 DCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMIS 181
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GYA++G + AR+ FD+ P W AMISGY + E+L +FR MQ+ I PDE
Sbjct: 182 GYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESI 241
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQM 310
VS+L ACA LG+LE+G WIH + ++ L+ +V + +L++MY KCG + A +LFD M
Sbjct: 242 FVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSM 301
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
RDVV W+ +I G+A HG A+ LF++M+++ V P+DITFI + +AC+++G EGL
Sbjct: 302 NMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGL 361
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK----IWGSLLS 426
M D M ++I K EHYGCLVDLL RAG ++A+ +I ++ + W + LS
Sbjct: 362 MLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLS 421
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPE-DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+C + ++A +A E +L L+ +G YVLLSN+YA G+ D R+R +++ K K
Sbjct: 422 ACCNHGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNK 481
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQD 526
PGCS +E++ + EF++G+ T P +++I +L+ + + D
Sbjct: 482 APGCSSVEIDGVISEFIAGEKTHPQMEEIHSVLKKMHMQLD 522
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/528 (37%), Positives = 308/528 (58%), Gaps = 47/528 (8%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSGGDLAYASLLFKQVKEPNVFL 79
++C NL+ LK+IH ++ + + + ++I G + YA +F Q+ EP++F+
Sbjct: 21 KNCNNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYAHQVFAQITEPDIFM 80
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N M+R + + + LY QM + PDKFT F++K C L G +
Sbjct: 81 WNTMMRGSSQSKNPSKVVLLYTQM-----ENRGVKPDKFTFSFLLKGCTRLEWRKTGFCV 135
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELI------------------------------ 169
H V K+G + +S N L+ + C +L+
Sbjct: 136 HGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGEL 195
Query: 170 -EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A ++F+EM +D+V+WN +I+GY + G+M+ AR LFD+ P +V+W MI+GY G
Sbjct: 196 GVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRG 255
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR---RTV 285
+AL++F +M+ VG PDE++++S+L ACA LG L++G +H C + + R +
Sbjct: 256 EQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLH--CSISEMTRGDLSVL 313
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+ NAL++MY KCG I A Q+F +M E+DV +W++VIGGLA HG A ++I LF EMQ LK
Sbjct: 314 LGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALK 373
Query: 346 -VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
+ PN+ITF+G++ AC+H G EG YF M+ + IE + H+GC+VDLLGRAG L +
Sbjct: 374 NIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSE 433
Query: 405 ALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAK 464
A +I +M ++P+A IW +LL +CR + N+E+ +A E LL L +++G+YVLLSNIYA
Sbjct: 434 AFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYAS 493
Query: 465 HGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE-VQEFVSGDDTKPFL 511
G W+ +RKL+ ++K G SLIE ++ V +F+ D KP L
Sbjct: 494 AGEWDGAEEVRKLMDDGGVRKEAGRSLIEADDRAVMQFLF--DPKPKL 539
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/583 (34%), Positives = 315/583 (54%), Gaps = 71/583 (12%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
+S + L + + L C + +K++H QI+K L ++ K+I + + A
Sbjct: 17 VSTRRLFEEKLQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVN 76
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F Q+++PNV LYN +IRA+ N A + M ++ + D FT PF++K+C
Sbjct: 77 VFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNG-----LFADNFTYPFLLKAC 131
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL--IEAHKVFEEMTDRDIVA 185
G + IH HV K+G N+L+D Y KC L A K+F EM ++D+V+
Sbjct: 132 NGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVS 191
Query: 186 WNNLIS-------------------------------GYARLGQMKKARMLFDKMPYTTI 214
WN++I GY + G+M +A LF+KMP +
Sbjct: 192 WNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNV 251
Query: 215 VSWTAMISGYTHIGSY-------------------------------AEALDVFRQMQMV 243
VSW+ M+SGY G EA ++ QM+
Sbjct: 252 VSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAA 311
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G++PD+ +++S+L ACA+ G L LG+ +H K + + NAL++MY KCG +++A
Sbjct: 312 GLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKA 371
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+F++M RD+VSW+ ++ GLA HG KAI LF +MQ+ P+ +T I +L AC H
Sbjct: 372 LSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHA 431
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
GF ++GL YF+SM+RDH I IEHYGC++DLLGR GRL++A +++ MPM+P+ IWG+
Sbjct: 432 GFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGT 491
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL +CR ++ + +A ++ L+ LE D GNY +LSNI+A G W V+ MR ++S +
Sbjct: 492 LLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGV 551
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQD 526
+K G S IE+++EV EF D + P I+ + L+ L QD
Sbjct: 552 QKPSGASSIELDDEVHEFTVFDKSHPETDKIYQI--LVKLGQD 592
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/512 (36%), Positives = 301/512 (58%), Gaps = 41/512 (8%)
Query: 9 SIKELEDR-FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
S+K L+ + + +LQ ++ ++ IH Q+++ SQ F+V +++ C+ + YAS
Sbjct: 33 SLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASR 92
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F+ PNV+LY A+I + ++ Y AI LY +ML + ILPD + + ++K+C
Sbjct: 93 IFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHES-----ILPDNYLMASILKAC 147
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
L G+++H+ K G S+ + +++LYGKC
Sbjct: 148 GSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKC---------------------- 185
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMV 243
G++ AR +F++MP + V WTAMI G+ AL+ FR MQ
Sbjct: 186 ---------GELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGE 236
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
+ P+E +IV VL AC+QLG+LE+G W+H Y K + + NALI MY +CG I++A
Sbjct: 237 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 296
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+FD+M +RDV++++T+I GL+ +GK+ +AI LF M ++ P ++TF+G+L+AC+H
Sbjct: 297 QTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHG 356
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G + G F SM RD+ +E +IEHYGC+VDLLGR GRL++A ++I M M PD + G+
Sbjct: 357 GLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGT 416
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LLS+C+ + NLE+ + L D+G YVLLS++YA G+W++ +++R ++ M
Sbjct: 417 LLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGM 476
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
+K PGCS IEVNNE+ EF+ GD P + I+
Sbjct: 477 QKEPGCSSIEVNNEIHEFLLGDLRHPQKERIY 508
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 303/505 (60%), Gaps = 14/505 (2%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN--SGGDLAYASLLFKQVKE 74
+VP +C ++ E+K+ H+ +L+ LS +N ++++ C+ GD+ YA LF +
Sbjct: 5 WVPPPWACSSMAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPN 64
Query: 75 PNVFLYNAMIRAYTN-NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
P+ FLYN + +A+ + + L++ Y ML+ + P+ FT P +I++C
Sbjct: 65 PDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQ-----HCVTPNAFTFPSLIRACK---LE 116
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
KQ+HAHV KFG + N L+ +Y L +A +VF M+D ++V+W +L+SGY
Sbjct: 117 EEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGY 176
Query: 194 ARLGQMKKARMLFDKMP-YTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEIS 251
++ G + +A +F+ MP VSW AMI+ + + EA +FR+M++ +E D
Sbjct: 177 SQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFV 236
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
++L AC +G+LE G WIH Y +K ++ + + +I+MY KCGC+++A +F +
Sbjct: 237 AATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLK 296
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR-LKVPPNDITFIGLLSACAHTGFWNEGL 370
+ V SW+ +IGG A HGK AI LF EM+ V P+ ITF+ +L+ACAH+G EG
Sbjct: 297 VKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGW 356
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
YF M H I+ EHYGC+VDLL RAGRL++A +I+EMPM PDA + G+LL +CR
Sbjct: 357 YYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRI 416
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ NLE+ ++ L+PE++G YV+L N+YA G+WE V+ +RKL+ + +KK PG S
Sbjct: 417 HGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFS 476
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIF 515
+IE+ V EFV+G P + I+
Sbjct: 477 MIEMEGVVNEFVAGGRDHPLAEAIY 501
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/511 (36%), Positives = 313/511 (61%), Gaps = 10/511 (1%)
Query: 12 ELEDR-FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
E++ R FV L++C E + E + ++ + K + +I G L A
Sbjct: 254 EMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQ 313
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F + + +V + MI Y + A+ +++ ML S + P++ TL V+ +C
Sbjct: 314 VFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLL-----SHVEPNEVTLIAVVSAC 368
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+ + +GK++H V + ++ NALLD+Y KCD L++A ++F+ M +D+ +W
Sbjct: 369 SDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWT 428
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
++++GYA+ G ++ AR FD+ P V W+AMI+GY+ E+L +F +M G+ P
Sbjct: 429 SMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVP 488
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALIEMYIKCGCINQASQL 306
E ++VSVL AC QL L LG+WIH Y ++ +V NA+++MY KCG I+ A+++
Sbjct: 489 IEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEV 548
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F M ER+++SW+T+I G A +G+A +AI++F +M+ + PN+ITF+ LL+AC+H G
Sbjct: 549 FSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLI 608
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+EG YFD+M+R + I+ + HY C+VDLLGR G L++A +I MPM+P WG+LL+
Sbjct: 609 SEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLN 668
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+CR + N+E+A ++ +LL L+PED+G YVLL+N A +W DV R+R L++ K +KK
Sbjct: 669 ACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKI 728
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWL 517
PG SLIE++ EF+ D++ P ++I+ L
Sbjct: 729 PGYSLIEIDGGFVEFLVADESHPQSEEIYKL 759
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 197/431 (45%), Gaps = 73/431 (16%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN--SGGDLAYASLLFKQVKEPNV 77
I++SC + +LK+I ++ + F V+++I C GDL YA +F +V++PN
Sbjct: 163 IMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNT 222
Query: 78 FLYNAMIRAYTNNH--LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
F++N MIR Y N ++ + +Y LR + D + F +K+C
Sbjct: 223 FMWNTMIRGYQNARKPIFAFSFFVYMFQLR-------VEMDSRSFVFALKACQQFETVFE 275
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+ ++ V K G + N L+ Y + L A +VF+E +D+D+V W +I GYA
Sbjct: 276 GESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYA- 334
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
H S EA++VF M + +EP+E+++++V
Sbjct: 335 -----------------------------AHDCS-EEAMEVFELMLLSHVEPNEVTLIAV 364
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ AC+ +G+LE+G+ +H ++ ++ + NAL++MY+KC C+ A +LFD+M +DV
Sbjct: 365 VSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDV 424
Query: 316 VSWSTVIGGLANHG-------------------------------KAHKAIHLFHEMQRL 344
SW++++ G A G K +++ LFHEM
Sbjct: 425 YSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMER 484
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
V P + T + +LSAC N G I + +VD+ + G +D
Sbjct: 485 GVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDA 544
Query: 405 ALNIIEEMPMK 415
A + MP +
Sbjct: 545 ATEVFSTMPER 555
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 8/299 (2%)
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS------GYARLGQ 198
K+ ++ I N L + C + + ++ MT I+ +S A G
Sbjct: 147 KWNSPTNVIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGD 206
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ A +F+++ W MI GY + A F M + +E D S V L A
Sbjct: 207 LHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKA 266
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
C Q ++ GE ++ K ++ N LI Y + G + A Q+FD+ ++DVV+W
Sbjct: 267 CQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTW 326
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+T+I G A H + +A+ +F M V PN++T I ++SAC+ G G + ++
Sbjct: 327 TTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVE- 385
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ ++ + + L+D+ + L A + + M K D W S+++ +LE A
Sbjct: 386 EKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK-DVYSWTSMVNGYAKCGDLESA 443
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 305/507 (60%), Gaps = 8/507 (1%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
R V ++ SC+++ ++K+ H Q++ L K++ + + L+YA LF Q+ +P
Sbjct: 18 RLVSLIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKLA-ACASLSYAHKLFDQIPQP 76
Query: 76 NVFLYNAMIRAYT-NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
++F+YN MI+A++ + H ++ +++ + +D + P++++ F +C L
Sbjct: 77 DLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLG----LFPNRYSFVFAFSACGNGLGVQ 132
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+Q+ H K GL+++ NAL+ +YGK + E+ KVF+ DRD+ +WN LI+ Y
Sbjct: 133 EGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYV 192
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
G M A+ LFD M +VSW+ +I+GY +G + EALD F +M +G +P+E ++VS
Sbjct: 193 GSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVS 252
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL-FDQMVER 313
L AC+ L +L+ G+WIH Y K + + ++I+MY KCG I AS++ F+ V++
Sbjct: 253 ALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQ 312
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
V W+ +IGG A HG ++AI++F +M+ K+ PN +TFI LL+AC+H EG +YF
Sbjct: 313 KVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYF 372
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M D+ I +IEHYGC+VDLL R+G L +A ++I MPM PD IWG+LL++CR Y +
Sbjct: 373 RLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKD 432
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR-SKSMKKTPGCSLI 492
+E + ++P G +VLLSNIY+ GRW + +R+ S+ KK PGCS I
Sbjct: 433 MERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEISRDRKKIPGCSSI 492
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLE 519
E+ +F+ GD + P ++I+ L+
Sbjct: 493 ELKGTFHQFLVGDQSHPQSREIYSFLD 519
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/511 (38%), Positives = 304/511 (59%), Gaps = 19/511 (3%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL--AYASLLFKQVKEPNVF 78
L C NL ++K+IH +L+ L QS +++TK+I G Y + + V+ N F
Sbjct: 57 LDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPF 116
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
L+ A+IR YT + AI +Y M ++ I P FT ++K+C + +LG+Q
Sbjct: 117 LWTAVIRGYTIEGKFDEAIAMYGCMRKEE-----ITPVSFTFSALLKACGSMGDLNLGRQ 171
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
HA + N ++D+Y KC ++ A KVF+EM +RD+++W LI+ YAR+G
Sbjct: 172 FHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGN 231
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
M+ A LF+ +P +V+WTAM++G+ EAL+ F +M+ GI DE+++ + A
Sbjct: 232 MESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 291
Query: 259 CAQLGSLELGEWI------HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
CAQLG+ + + Y +H+ VI +ALI+MY KCG + +A +F M
Sbjct: 292 CAQLGASKYADRAVQIAQKSGYSPSDHV----VIGSALIDMYSKCGNVEEAVNVFVSMNN 347
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
++V S+S++I GLA HG+A +A+ LFH M + + PN +TF+G L+AC+H+G ++G
Sbjct: 348 KNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQ 407
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
F SM + +E +HY C+VDLLGRAGRL +AL +I+ M ++P +WG+LL +CR +
Sbjct: 408 VFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIH 467
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS- 490
+N +IA IA EHL LEP+ GNY+LLSN+Y+ G W V +RKLI+ K +KKTP S
Sbjct: 468 NNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSW 527
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+++ N ++ +F G+ P K I LE L
Sbjct: 528 VVDKNGQMHKFFPGNLNHPMSKKIQDKLEEL 558
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 200/543 (36%), Positives = 312/543 (57%), Gaps = 70/543 (12%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN--SGGDLAYASLLFKQVKEPNV 77
+L++C+++ LK+I TQIL+ QS + K + C S G+L YA +F + P +
Sbjct: 38 LLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGL 97
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F+YN +I+A+T N + A+ L++Q+ + + PD FT PFV K+ L G+
Sbjct: 98 FIYNLVIKAFTKNGSFRKAVLLFRQLREEGLS-----PDNFTYPFVFKAIGCLGEVREGE 152
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL- 196
+++ V K GL+ + N+L+D+Y + + +VFEEM RD+V+WN LISGY +
Sbjct: 153 KVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCR 212
Query: 197 ----------------------------------GQMKKARMLFDKMPYTTIVSWTAMIS 222
GQ+ +AR LF++ P +V WTAMI+
Sbjct: 213 RYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMIN 272
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
GY + +A+ +FR+MQ+ + PD ++V+ LL
Sbjct: 273 GYVQFNRFDDAVALFREMQIKRVSPDRFTLVA-------------------------LLT 307
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
V+ ALIEMY KCG I ++ ++F+ + E+D SW+++I GLA +GK KA+ LF EM
Sbjct: 308 DAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMV 367
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+ V P+DITFIG+LSAC+H G EG +F SM + IE K+EHYGCL+DLLGRAG+L
Sbjct: 368 QTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQL 427
Query: 403 DQALNIIEEMPMKPDAKI---WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLS 459
D+A +IE+ P + I +G+LLS+CRT+ N+E+ + L+ +E D+ + LL+
Sbjct: 428 DEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLA 487
Query: 460 NIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
NIYA RWEDV+++R+ ++ +KK PGCS +EVN V EF+ GD + P +++I+ +L+
Sbjct: 488 NIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLD 547
Query: 520 LLA 522
+A
Sbjct: 548 SIA 550
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 297/501 (59%), Gaps = 5/501 (0%)
Query: 34 HTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLY 93
H Q L + S F+V + + G + A LF + +V +N +I Y + L
Sbjct: 146 HVQKLGF--SADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLP 203
Query: 94 GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI 153
A+ L+ +++ D G + PD+ T+ + CA + LGK++H V G++
Sbjct: 204 REALELFWRLVED---GKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVR 260
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
NA++D+Y KC L A VFE + ++ +V+W +I G+ARLG M+ ARMLFD+MP
Sbjct: 261 LMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERD 320
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
+ W A+++GY EA+ +F +MQ ++P+EI++V++L AC+QLG+LE+G W+H
Sbjct: 321 VFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHH 380
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
Y D++ L + +L++MY KCG I +A +F ++ +++ ++W+ +I GLANHG A +
Sbjct: 381 YIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADE 440
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
AI F M L + P++ITFIG+LSAC H G EG +F M +H+E K++HY C++
Sbjct: 441 AIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMI 500
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
DLLGRAG LD+A ++ MPM PDA +WG+L +CR + N+ + A L+ L+P D+G
Sbjct: 501 DLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSG 560
Query: 454 NYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKD 513
YVLL+N+YA+ + ++R ++R ++K PGCS IE+N V EF+ D +
Sbjct: 561 IYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTIA 620
Query: 514 IFWLLELLALHQDRAKDVIDI 534
I+ L + L ++IDI
Sbjct: 621 IYDCLHGITLQMKHTANLIDI 641
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 188/409 (45%), Gaps = 72/409 (17%)
Query: 80 YNAMIRAYT---NNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
YNA RA + + HL + LY+ +L S PD T PF++K+CA L
Sbjct: 84 YNAAFRALSLCPHRHLVDRHCLPLYRALL----CSSSARPDHLTFPFLLKACARLQYRPY 139
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G + HV K G + NA + + ++ A ++F+E RD+V+WN LI GY R
Sbjct: 140 GAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVR 199
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G ++A LF W + G + PDE++++
Sbjct: 200 SGLPREALELF----------WRLVEDGK-------------------AVRPDEVTMIGA 230
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI--------------- 300
+ CAQ+G LELG+ +H + D + + NA+++MY+KCG +
Sbjct: 231 VSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTV 290
Query: 301 ----------------NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
A LFD+M ERDV W+ ++ G + + +AI LFHEMQ
Sbjct: 291 VSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQES 350
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
KV PN+IT + LLSAC+ G G+ + R H + + LVD+ + G + +
Sbjct: 351 KVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR-HQLYLSVALGTSLVDMYAKCGNIKK 409
Query: 405 ALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL--LVLEPED 451
A+ I +E+P K +A W +++ + + + A+ + + L L+P++
Sbjct: 410 AICIFKEIPDK-NALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDE 457
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 34/281 (12%)
Query: 14 EDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E V +L +C L L+ +H I ++ L S L T ++D+ G++ A +FK
Sbjct: 356 EITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFK 415
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--A 128
++ + N + AMI N+ AI +++M+ G + PD+ T V+ +C A
Sbjct: 416 EIPDKNALTWTAMICGLANHGHADEAIEYFQRMI---DLG--LQPDEITFIGVLSACCHA 470
Query: 129 GLLCPSLGKQIHAHVC-KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAW 186
GL+ G+Q + + K+ L+ + ++DL G+ L EA ++ M D D V W
Sbjct: 471 GLV--KEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVW 528
Query: 187 NNL-----ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
L + G LG+ K A L + P + + + + + Y +A V M+
Sbjct: 529 GALFFACRMHGNITLGE-KAAMKLVELDPSDSGI-YVLLANMYAEANMRKKADKVRVMMR 586
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNHL 280
+G+E +P C+ +EL +H + DK+HL
Sbjct: 587 HLGVEK--------VPGCS---CIELNGVVHEFIVKDKSHL 616
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 314/518 (60%), Gaps = 11/518 (2%)
Query: 8 LSIKELEDR--FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
LS E D+ + +LQ+ + ++K+IH Q + L +L +I V G + A
Sbjct: 58 LSSGECPDKQTLLYLLQAVNFISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLA 117
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F+++ P++ +N MI Y A+ L+ +M+ G + PD+FT+ ++
Sbjct: 118 HQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMV-----GLGLEPDEFTILGLLV 172
Query: 126 SCAGLLCPSLGKQIHAHV--CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
SC L GK +H + K + S+ I NALLD+Y KC ++ A + F + ++DI
Sbjct: 173 SCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDI 232
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
V+WN +++G A++G++++AR+ F +MP IVSW ++++GY G +A ++ M M
Sbjct: 233 VSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVME 292
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
+ PD ++++S++ A + G+L+ G W H + + + + +ALI+MY KCG I +A
Sbjct: 293 KVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERA 352
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
S++F ++ ++DV W+T+I GLA HG KA+ LF EMQ V P+D+TF+ +LSAC+H+
Sbjct: 353 SRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQE-DVSPDDVTFVSVLSACSHS 411
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G ++G+ F SM D+ IE +EHYGCLVDLL R+GRL +A +II++MPMKP IWG+
Sbjct: 412 GLVDQGIKVFSSMT-DYGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGA 470
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
+L++C+ ++E+A IA LL L+PE+ G Y LLSNIYA GRW ++R+ + S+ +
Sbjct: 471 MLNACQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGV 530
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
KKT GCS + V+ V F+S D P DI +L L
Sbjct: 531 KKTAGCSSVVVDGVVHNFISADKCHPGWVDISSILNCL 568
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 184/387 (47%), Gaps = 79/387 (20%)
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
PN+F+YN +I A+++ + LY +L PDK TL +++++ + S
Sbjct: 30 PNLFIYNTLISAFSSLKKIE-SFYLYNVLLSSGEC-----PDKQTLLYLLQAVNFI---S 80
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
KQIH GL S +N L+ +Y + + AH+VFE+M DIV++N +I GYA
Sbjct: 81 QVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYA 140
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+ G G EA+ +F +M +G+EPDE +I+
Sbjct: 141 KKG-----------------------------FG--LEAMRLFHEMVGLGLEPDEFTILG 169
Query: 255 VLPACAQLGSLELGEWIHMYCD--KNHLLRRTVICNALIEMYIKC--------------- 297
+L +C QLG+++ G+ +H + + K + ++ NAL++MY+KC
Sbjct: 170 LLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKE 229
Query: 298 -----------GC-----INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
GC + QA F QM RD+VSW++++ G A G L +M
Sbjct: 230 KDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDM 289
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY--GCLVDLLGRA 399
KV P+ +T I L+SA +G ++G + R ++ K++ + L+D+ +
Sbjct: 290 VMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIR---MQIKLDAFLGSALIDMYCKC 346
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLS 426
G +++A + +E+ K D +W ++++
Sbjct: 347 GSIERASRVFKEIN-KKDVTVWTTMIT 372
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/525 (36%), Positives = 312/525 (59%), Gaps = 22/525 (4%)
Query: 17 FVPILQSCENLIELKKIHTQIL---KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L C L+++H + + F + + S L YA LF
Sbjct: 12 FVAVLSRCSTRAHLEQLHAHAFVAGRAAAQTTTFHLIRFAAFRLSC--LTYARHLFDATP 69
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAIN-----------LYKQMLRDPRTGSLILPDKFTLPF 122
P+VFLY+A++ AY + + L+ +MLR R P++F P
Sbjct: 70 HPSVFLYSAILSAYVSAAATASSYAHAHAHARDALALFLRMLRHGRPA----PNQFVYPL 125
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
V+++ +G+ + K IH+H CK G H I ++LD Y + + +A K+F+ +T+R+
Sbjct: 126 VLRAASGVGV-GIVKSIHSHACKSGFCGHDIIRTSVLDGYSRHGMMADARKLFDGLTERN 184
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+V+W L+SGYAR G++ A +LF++MP + +W A+I+G + G + EA+ +F +M
Sbjct: 185 VVSWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFVEAVGIFGRMVG 244
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
G P+ ++ VL AC LG L++G+ IH Y + + + + N LI+MY KCG +
Sbjct: 245 AGFRPNATTVSCVLSACGHLGMLKIGKLIHCYAWRTCVGFGSSVLNGLIDMYGKCGNLEG 304
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
A +FD++ +R + +W+++I LA HG + AI +F+EM+ V P+ +TF+GLL+AC H
Sbjct: 305 ARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVVTFVGLLNACTH 364
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
GF +EG+ YF+ M+ +H IE +IEHYGC++DLLGRAGR ALN+I +M ++ D +WG
Sbjct: 365 GGFVDEGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNVISDMRIEADEVMWG 424
Query: 423 SLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
SLL++CR + +E A +A+ LL L+P + V+L+N+Y++ G WE+V ++RK ++ ++
Sbjct: 425 SLLNACRVHRQVEFAELAIRKLLELDPNNANYVVMLANVYSEGGLWEEVRKVRKFVKEEN 484
Query: 483 M-KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQD 526
+ KK PGCS IEV+ + F SGDD P ++I+ LE LA D
Sbjct: 485 IGKKLPGCSWIEVDRKTHRFYSGDDAHPESENIYDTLEDLAASMD 529
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/512 (37%), Positives = 301/512 (58%), Gaps = 12/512 (2%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVK 73
R + +L C N+ +LK+ H Q+LK L SNF+++++++ C + G L++A LF+ ++
Sbjct: 7 RCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQ 66
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
P + ++N MI+A + AI ++ + R+ I PD +TLP+V+K+ A +
Sbjct: 67 HPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNG-----IHPDTYTLPYVLKASARMTNI 121
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+ IHA K G + N+LL +Y D + A +VF+EM + V+W +I GY
Sbjct: 122 HLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGY 181
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A +G + AR LFD W AMISGY + E L +FR MQ+ +EPDE IV
Sbjct: 182 ANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIV 241
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
++L ACA +G+L+ G WIH Y + L + LI+MY KCG ++ A LF++M +R
Sbjct: 242 TILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQR 301
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D V W+ +I G+A G AI LF EM++ + P++ITFI + AC+++G +EG+ +
Sbjct: 302 DNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIRIW 361
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP----DAKIWGSLLSSCR 429
+ M H IE K EHYGC++DLL R GR ++A +I+ +P +A W + LS+C
Sbjct: 362 NRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACC 421
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ + A +A E L LE +G YVLLSN+YA G+ ED R+R +++ K ++K PGC
Sbjct: 422 KHGQTQQAEVAAERLFQLE-RHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGC 480
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
S I+VN V EF++G+ T + +I +LE L
Sbjct: 481 SSIKVNGVVNEFIAGEKTHRHIDNIHLVLEEL 512
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/524 (37%), Positives = 313/524 (59%), Gaps = 18/524 (3%)
Query: 19 PILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQVKEPN 76
P + C+ LK+IH +K +++ ++ ++ YA F Q+ PN
Sbjct: 20 PQISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPN 79
Query: 77 VFLYNAMIRAYTNN------HLYGLAINLY-KQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
F +N +IRA ++ H+ L LY ML D L+ P+KFT P V+K+CA
Sbjct: 80 CFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTD----GLVEPNKFTFPCVLKACAK 135
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF-EEMTDRDIVAWNN 188
L GKQ+H V K GL S + L+ +Y C + +AH +F + + ++V WN
Sbjct: 136 LARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNV 195
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+I GY R+G ++ +R LFD MP ++VSW MISG G + EA+++F MQ+ + P+
Sbjct: 196 MIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPN 255
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+++VSVLPA ++LG++ELG+W+H++ +KN + V+ +ALI+MY KCG I++A Q+F+
Sbjct: 256 YVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFE 315
Query: 309 QMV-ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
+ +++ ++WS +IGGLA HG+A A+ F MQ+ V P+D+ +IG+LSAC+H G
Sbjct: 316 GIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVE 375
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EG + M + +IEHYGC+VDLLGRAG L++A +I MP+KPD I +LL +
Sbjct: 376 EGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGA 435
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
C+ + N+E+ + L+ P D+G+YV LSN++A G WE V ++R ++ ++K P
Sbjct: 436 CKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDP 495
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
GCS IE++ + EF+ DD+ P + I +LE ++ DR + V
Sbjct: 496 GCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMS---DRLRSV 536
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/504 (36%), Positives = 299/504 (59%), Gaps = 9/504 (1%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
+RF ++ +++ L +IH +L+ L + L K+ + G L + +F E
Sbjct: 48 ERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDE 107
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
PNVF ++A+I ++ + L+ A Y QML + P+ FT V+KSC+
Sbjct: 108 PNVFSFSAIIHSHVQSRLFDRAFGYYSQML-----SCGVEPNAFTFSSVLKSCS----LE 158
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK +H K GL S L+D+Y + +++ A ++F++M +R +V+ +++ Y+
Sbjct: 159 SGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYS 218
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
++G++ KAR LF+ M +V W MI GY G E+L +FR+M + P+E+++++
Sbjct: 219 KMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLA 278
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
VL AC QLG+LE G WIH Y + + + ALI+MY KCG + A +FD++ ++D
Sbjct: 279 VLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKD 338
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VV+W+++I G A HG + A+ LF EM P DITFIG+LSAC H G EG +F
Sbjct: 339 VVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFR 398
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
M+ + IE KIEHYGC+V+LLGRAG L++A +++ M + D +WG+LL CR + N+
Sbjct: 399 LMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNI 458
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
++ + L+ + ++G YVLLSN+YA G WE V++MR L++ ++K GCS IEV
Sbjct: 459 KLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEV 518
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLL 518
+N+V EFV+G+ P K+I+ +L
Sbjct: 519 DNKVHEFVAGERKHPKSKEIYVML 542
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/485 (40%), Positives = 288/485 (59%), Gaps = 42/485 (8%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S GD A +F ++ E +V +NAMI Y N Y A+ L+K+M+R
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR---- 189
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF----GLKSHSITENALLDLYGKC 165
+ + PD+ TL V+ +CA LG+Q+H+ V G S NAL+DLY KC
Sbjct: 190 -TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKC 248
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
G ++ A LF+ + +VSW +I GYT
Sbjct: 249 -------------------------------GDVETAFGLFEGLSCKDVVSWNTLIGGYT 277
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN--HLLRR 283
H Y EAL +F++M G P++++++SVLPACA LG++++G WIH+Y DK +
Sbjct: 278 HTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNE 337
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
T + +LI+MY KCG I A Q+F+ M+ R + SW+ +I G A HG+A+ A LF M+
Sbjct: 338 TSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRG 397
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+V P+DITF+GLLSAC+H+G + G F SM +D+++ K+EHYGC++DLLG +G
Sbjct: 398 NRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFK 457
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A +I MPM+PD IW SLL +C+ + NLE+A + L+ +EPE++G+YVLLSNIYA
Sbjct: 458 EAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYA 517
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
GRWEDV+R+R ++ K MKK PGCS IEV++ V EF+ GD P ++I+ +LE + +
Sbjct: 518 TAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDV 577
Query: 524 HQDRA 528
+ A
Sbjct: 578 QLEEA 582
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 205/358 (57%), Gaps = 14/358 (3%)
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
L YA +F+ ++EPN+ ++N M+R + ++ A+ +Y +M+ LP+ ++ P
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGH-----LPNSYSFP 68
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
F++KSCA G+QIHA V K G +L+ +Y + L +A KVF+ + R
Sbjct: 69 FLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHR 128
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
D+V+ LI+GYA G + AR +FD++ +VSW AMI+GY G Y EAL++F++M
Sbjct: 129 DVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMM 188
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC---DKNHLLRRTV-ICNALIEMYIKC 297
+ PDE ++VSV+ ACAQ GS+ELG +H + D +H ++ I NALI++Y KC
Sbjct: 189 RTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKC 248
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G + A LF+ + +DVVSW+T+IGG + +A+ LF EM R PND+T + +L
Sbjct: 249 GDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVL 308
Query: 358 SACAHTGFWNEGL---MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
ACAH G + G +Y D K+ + ++ L+D+ + G ++ A + M
Sbjct: 309 PACAHLGAIDIGRWIHVYID--KKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM 364
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 175/371 (47%), Gaps = 48/371 (12%)
Query: 9 SIKELEDRFVPILQSC--ENLIEL-KKIHTQILK----YLLSQSNFLVTKMIDVCNSGGD 61
+++ E V ++ +C IEL +++H+ + + S S +V +ID+ + GD
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
+ A LF+ + +V +N +I YT+ +LY A+ L+++MLR P+ TL
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGEC-----PNDVTLL 305
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKF--GLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
V+ +CA L +G+ IH ++ K G+ + + +L+D+Y KC ++ AH+VF M
Sbjct: 306 SVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSML 365
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
R + +WN +I G+A G+ A D+F +
Sbjct: 366 YRSLSSWNAMIFGFAMHGRANAA-------------------------------FDLFSR 394
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH-LLRRTVICNALIEMYIKCG 298
M+ +EPD+I+ V +L AC+ G L+LG I +++ L + +I++ G
Sbjct: 395 MRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSG 454
Query: 299 CINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
+A ++ M +E D V W +++ HG A ++ +++ P N +++ L
Sbjct: 455 LFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIE-PENSGSYVLLS 513
Query: 358 SACAHTGFWNE 368
+ A G W +
Sbjct: 514 NIYATAGRWED 524
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 158/355 (44%), Gaps = 28/355 (7%)
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM----PYTTIVSWTAMI 221
D L A VFE + + +++ WN ++ G+A A ++ +M S+ ++
Sbjct: 12 DGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLL 71
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
++ E + Q+ +G D S++ A+ G LE + + +H
Sbjct: 72 KSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKV--FDASSH-- 127
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
R V C ALI Y G A ++FD++ ERDVVSW+ +I G +G+ +A+ LF EM
Sbjct: 128 RDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEM 187
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLM---YFDSMKRDHHIEHKIEHYGCLVDLLGR 398
R V P++ T + ++SACA +G G + D DH ++ L+DL +
Sbjct: 188 MRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSK 247
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLL 458
G ++ A + E + K D W +L+ T++NL + + ++ E + LL
Sbjct: 248 CGDVETAFGLFEGLSCK-DVVSWNTLIGG-YTHTNLYKEALLLFQEMLRSGECPNDVTLL 305
Query: 459 SNIYA-KH------GRWEDVSRMRKL--------IRSKSMKKTPGCSLIEVNNEV 498
S + A H GRW V +KL +R+ + C IE ++V
Sbjct: 306 SVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQV 360
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/512 (38%), Positives = 308/512 (60%), Gaps = 12/512 (2%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
++K++H L+ + ++ L+ +++ + N L YA LF + P +FLYN +I++Y+
Sbjct: 3 QIKQLHAHCLRTGVDETKDLLQRLLLIPN----LVYARKLFDLHRNPCIFLYNKLIQSYS 58
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
+H +I LY + D I P+ T F+ + A + +H+ + G
Sbjct: 59 VHHQPHESIVLYNLLSFDG-----IRPNHHTFNFIFAASASFSSARPLRLLHSQFFRSGF 113
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+S S AL+ Y K L A +VF+EM++RD+ WN +I+GY R G MK A LFD
Sbjct: 114 ESDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEISIVSVLPACAQLGSLEL 267
MP + SWT +ISG++ G+Y+EAL +F M+ ++P+ I++VSVLPACA LG LE+
Sbjct: 174 MPNKNVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEI 233
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLA 326
G + Y +N + NA +EMY KCG I+ A +LFD++ +R+++SW+++IG LA
Sbjct: 234 GRRLEGYARENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNSMIGSLA 293
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
HGK +A+ L+ +M + P+ +TF+GLL AC H G +G SM+ H I K+
Sbjct: 294 THGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKL 353
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
EHYGC++DLLGR G+L +A ++I+ MPMKPDA +WG+LL +C + N+EIA IA E L+
Sbjct: 354 EHYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMK 413
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS-LIEVNNEVQEFVSGD 505
LEP + GN V++SNIYA + +W+ V RMRKL++ ++M K G S +E EV +F D
Sbjct: 414 LEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEAGVEVHKFTVED 473
Query: 506 DTKPFLKDIFWLLELLALHQDRAKDVIDIMYE 537
+ P +I+ +L+ ++ K D M +
Sbjct: 474 KSHPRSYEIYQVLDEISRRMKPEKSRFDSMLQ 505
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 183/451 (40%), Positives = 274/451 (60%), Gaps = 14/451 (3%)
Query: 78 FLYNAMIRAYTNNHLYGLA-----INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
FL+N +IRA+ I+++ +M + PD T PF+++S A
Sbjct: 25 FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHG-----VQPDFHTFPFLLQSFASPSL 79
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
LG+ +HA + +FGL + +L+ +Y C L A +VF+E+ D+ +WN++I+
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINA 139
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI---EPDE 249
+ G + AR LF MP ++SW+ MI+GY G Y EAL +FR+MQM+G+ P+E
Sbjct: 140 NFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 199
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++ VL AC +LG+LE G+W H Y DK + V+ ALI+MY KCG + +A+ +F
Sbjct: 200 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 259
Query: 310 M-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ +DV++WS +I GLA HG A + + LF +M V PN +TF+ + AC H G +E
Sbjct: 260 LGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSE 319
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G Y M D+ I I+HYGC+VDL GRAGR+ +A N+++ MPM+PD +WG+LLS
Sbjct: 320 GKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGS 379
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R + ++E +A++ L+ LEP ++G YVLLSN+YAK GRWEDV +R L+ + +KK PG
Sbjct: 380 RMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPG 439
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
CSLIEV + EF GDD+ P + I +LE
Sbjct: 440 CSLIEVGGVLHEFFVGDDSHPETRQIHMMLE 470
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 162/370 (43%), Gaps = 64/370 (17%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+ +H QIL++ L+ F+ T +I + +S G+L +A +F ++ +P++ +N++I A
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQA 143
Query: 91 HLYGLAINL------------------------YKQMLRDPRTGSL-----ILPDKFTLP 121
L +A NL YK+ L R + + P++FT+
Sbjct: 144 GLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMS 203
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TD 180
V+ +C L GK HA++ K G+ + AL+D+Y KC + +A VF + +
Sbjct: 204 GVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPN 263
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
+D++AW+ +ISG A G + E + +F +M
Sbjct: 264 KDVMAWSAMISGLAMHGLAE-------------------------------ECVGLFSKM 292
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
G+ P+ ++ ++V AC G + G +++ + ++ ++++Y + G
Sbjct: 293 INQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGR 352
Query: 300 INQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I +A + M +E DV+ W ++ G HG ++ L+ P N ++ L +
Sbjct: 353 IKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELE-PTNSGAYVLLSN 411
Query: 359 ACAHTGFWNE 368
A G W +
Sbjct: 412 VYAKRGRWED 421
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 211/565 (37%), Positives = 316/565 (55%), Gaps = 60/565 (10%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFL 79
+ C ++ LK +H QI+ + L+ + K+I C + GDL YA +F Q+ +PN F+
Sbjct: 122 EKCSSMRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFM 181
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS----- 134
YN++IR Y+N+ A+ L+++M+ S + P++FTLPFV+K+C C S
Sbjct: 182 YNSLIRGYSNSDDPIDAVLLFRRMI-----CSGLSPNEFTLPFVLKACG---CKSAYWEA 233
Query: 135 -----------LGKQIHAH--------VCKF--------------------------GLK 149
+G + VC G+K
Sbjct: 234 VLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEITGVK 293
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
I NAL D+Y KC L A +F+ ++++V+W ++IS YA+ G ++ AR +FD+M
Sbjct: 294 IDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQM 353
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P +VSW +MIS Y G Y EALD+F +M+ + PDE ++VS+L AC+QLG L +G+
Sbjct: 354 PGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGK 413
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
IH Y N + N+LI+MY KCG + A +F +M +++VSW+ +IG LA HG
Sbjct: 414 KIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHG 473
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+AI LF EMQ P++IT GLLSAC+H+G + GL YFD M + + +IEHY
Sbjct: 474 CGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHY 533
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
C+VDLLGR G L +A+ +I MPMKPD +WG+LL +CR + N+EI ++ LL LEP
Sbjct: 534 ACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEP 593
Query: 450 EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
G YVL+SNIY + RWEDV ++RKL+ + +KK S IE++ + EF+ D
Sbjct: 594 HSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHK 653
Query: 510 FLKDIFWLLELLALHQDRAKDVIDI 534
I+ +L+ L H A + +I
Sbjct: 654 ISSSIYAMLDQLTDHLRSAGYLCNI 678
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 296/493 (60%), Gaps = 12/493 (2%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+K++H L+ + ++ L+ +++ + N L YA LF + FLYN +I+AY
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLLIPN----LVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
+H +I LY + D + P T F+ + A + +H+ + G +
Sbjct: 60 HHQPHESIVLYNLLSFDG-----LRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
S S L+ Y K L A +VF+EM+ RD+ WN +I+GY R G MK A LFD M
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEISIVSVLPACAQLGSLELG 268
P + SWT +ISG++ G+Y+EAL +F M+ ++P+ I++VSVLPACA LG LE+G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLAN 327
+ Y +N +CNA IEMY KCG I+ A +LF+++ +R++ SW+++IG LA
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
HGK +A+ LF +M R P+ +TF+GLL AC H G +G F SM+ H I K+E
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
HYGC++DLLGR G+L +A ++I+ MPMKPDA +WG+LL +C + N+EIA IA E L L
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS-LIEVNNEVQEFVSGDD 506
EP + GN V++SNIYA + +W+ V RMRKL++ ++M K G S +EV +V +F D
Sbjct: 415 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 474
Query: 507 TKPFLKDIFWLLE 519
+ P +I+ +LE
Sbjct: 475 SHPRSYEIYQVLE 487
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 202/567 (35%), Positives = 310/567 (54%), Gaps = 59/567 (10%)
Query: 6 GALSIKEL-EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
GA S + L E + + ++++H Q+LK L + +++ L
Sbjct: 343 GAPSQRRLVEQHLASLPRGLPRAAHVRELHAQVLKQGLHLNPRAAARLVSAYALLRLLPS 402
Query: 65 ASLLFKQVKEP--NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPF 122
+ +F +++P + FL N M+RAY A+ + M R D FT F
Sbjct: 403 SRRVFDAIRDPHADAFLANTMLRAYALGGAPRDALAAFSAMPRR---------DSFTYSF 453
Query: 123 VIKS-CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
+IK+ A + P + +H+HV K G + NAL+D Y K +A KVF+EM +R
Sbjct: 454 LIKALSAAGVAPV--RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPER 511
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM- 240
D+V+WN ++ R G++ AR LFD+MP VSW ++ GYT G A ++F++M
Sbjct: 512 DVVSWNTAMAAMVREGELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMP 571
Query: 241 ----------------------------QMVG--------------IEPDEISIVSVLPA 258
+M G +E D ++VS+L A
Sbjct: 572 ERNVVSWSTMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAA 631
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD-QMVERDVVS 317
CA+ GSL LG+ IH Y K +L R T +CNALI+M+ KCGC+N+A +FD + V++D VS
Sbjct: 632 CAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVS 691
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+++IGG A HG KA+ LF +M++ P+ +T I +LSAC H GF +EG YF +M+
Sbjct: 692 WNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNME 751
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
RD+ I +IEHYGC++DLLGR G + +A+++I+ MP +P+ IWGSLLS+CR + N+E A
Sbjct: 752 RDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYA 811
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
IA+ L L+P + GNY +LSNIYA+ G+W D+++ R ++ +KT G S +E+N
Sbjct: 812 EIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNET 871
Query: 498 VQEFVSGDDTKPFLKDIFWLLELLALH 524
EF GD I +++ L+ H
Sbjct: 872 FHEFTVGDRKHQDSDQISEMVDRLSSH 898
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 289/493 (58%), Gaps = 9/493 (1%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSN-FLVTKMIDVCNSGGDLAYASLLFKQV 72
F P+L++ L L +IH K+ ++ F+ + +I + + G + A LF ++
Sbjct: 118 FPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKM 177
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+V +N MI Y+ N Y + LY++M S PD L V+ +CA
Sbjct: 178 SHRDVVTWNIMIDGYSQNAHYDHVLKLYEEM-----KTSGTEPDAIILCTVLSACAHAGN 232
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
S GK IH + G + S + +L+++Y C + A +V++++ + +V ++SG
Sbjct: 233 LSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSG 292
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA+LG ++ AR +FD+M +V W+AMISGY EAL +F +MQ I PD+I++
Sbjct: 293 YAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITM 352
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+SV+ ACA +G+L +WIH Y DKN R I NALI+MY KCG + +A ++F+ M
Sbjct: 353 LSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPR 412
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
++V+SWS++I A HG A AI LFH M+ + PN +TFIG+L AC+H G EG +
Sbjct: 413 KNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKF 472
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F SM +H I + EHYGC+VDL RA L +A+ +IE MP P+ IWGSL+S+C+ +
Sbjct: 473 FSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHG 532
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
+E+ A LL LEP+ G V+LSNIYAK RW+DV +RKL++ K + K CS I
Sbjct: 533 EIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRI 592
Query: 493 EVNNEVQEFVSGD 505
EVNNEV F+ D
Sbjct: 593 EVNNEVHVFMMAD 605
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 227/495 (45%), Gaps = 84/495 (16%)
Query: 13 LEDRFVP------ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDV-----CNSGGD 61
+ R +P +L SC+ L +K+IH QIL+ + SN L+ K++ S
Sbjct: 5 MSTRLIPSPSEKGLLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSA 64
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP-DKFTL 120
L YA LF + P N ++R ++ ++LY + R+ P D+F+
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNG------FPLDRFSF 118
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
P ++K+ + L +LG +IH KFG + ++AL+ +Y C +++A +F++M+
Sbjct: 119 PPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMS 178
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
RD+V WN +I GY++ Y H+ L ++ +
Sbjct: 179 HRDVVTWNIMIDGYSQNAH-------------------------YDHV------LKLYEE 207
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY----------------------CDK 277
M+ G EPD I + +VL ACA G+L G+ IH + C
Sbjct: 208 MKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGA 267
Query: 278 NHLLRRT---------VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
HL R V+ A++ Y K G + A +FD+MVE+D+V WS +I G A
Sbjct: 268 MHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAES 327
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
+ +A+ LF+EMQR ++ P+ IT + ++SACA+ G + + + + +
Sbjct: 328 YQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQA-KWIHTYADKNGFGRTLPI 386
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
L+D+ + G L +A + E MP K + W S++++ + + + A IA+ H + +
Sbjct: 387 NNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGDADSA-IALFHRMKEQ 444
Query: 449 PEDTGNYVLLSNIYA 463
+ + +YA
Sbjct: 445 NIEPNGVTFIGVLYA 459
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 191/525 (36%), Positives = 299/525 (56%), Gaps = 38/525 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +L SC+NL L +IH +KY + ++ K+I C + L YA L EP
Sbjct: 1 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 60
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+ F++N ++R Y+ + ++ ++ +M+R + PD F+ FVIK+
Sbjct: 61 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRK----GFVFPDSFSFAFVIKAVENFRSLRT 116
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS---- 191
G Q+H K GL+SH L+ +YG C + A KVF+EM ++VAWN +I+
Sbjct: 117 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 176
Query: 192 ---------------------------GYARLGQMKKARMLFDKMPYTTIVSWTAMISGY 224
GY + G+++ A+ +F +MP+ VSW+ MI G
Sbjct: 177 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 236
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT 284
H GS+ E+ FR++Q G+ P+E+S+ VL AC+Q GS E G+ +H + +K
Sbjct: 237 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 296
Query: 285 VICNALIEMYIKCGCINQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+ NALI+MY +CG + A +F+ M E R +VSW+++I GLA HG+ +A+ LF+EM
Sbjct: 297 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 356
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
V P+ I+FI LL AC+H G EG YF MKR +HIE +IEHYGC+VDL GR+G+L
Sbjct: 357 YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ 416
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A + I +MP+ P A +W +LL +C ++ N+E+A + L L+P ++G+ VLLSN YA
Sbjct: 417 KAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYA 476
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
G+W+DV+ +RK + + +KKT SL+EV + +F +G+ K
Sbjct: 477 TAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKK 521
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 186/435 (42%), Positives = 279/435 (64%), Gaps = 6/435 (1%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
+L D FTLPFV+KSCA L +G+ +H + GL+ +L+D+Y KC + +A
Sbjct: 103 LLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDAR 162
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
K+F++M RD+ +WN LI+GY + G++ A LF++M + IVSWTAMISGYT G +
Sbjct: 163 KLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQ 222
Query: 233 ALDVFRQMQMVGIE--PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
AL +F +M G E P+ ++IVSVLPACAQ +LE G IH + + L + + AL
Sbjct: 223 ALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTAL 282
Query: 291 IEMYIKCGCINQASQLFDQMVE--RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
MY KC + +A FD + + +++++W+T+I A+HG +A+ +F M R V P
Sbjct: 283 AGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQP 342
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ +TF+GLLS C+H+G + GL +F+ M H +E ++EHY C+VDLLGRAGRL +A +
Sbjct: 343 DAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKEL 402
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I +MPM+ +WG+LL++CR++ NLEIA +A L VLEP+++GNYVLLSN+YA+ G W
Sbjct: 403 ISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMW 462
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
E+V ++R L++ + MKK+PGCS IE+N + F+ D + P K+I+ LE L A
Sbjct: 463 EEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMA 522
Query: 529 KDVIDIMY--EDIGE 541
+ D + DI E
Sbjct: 523 GYIPDTSFVLHDISE 537
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 149/334 (44%), Gaps = 54/334 (16%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G++ A LF++++ N+ + AMI YT N A+ L+ +ML+D GS + P+ T
Sbjct: 187 GEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQD---GSEMKPNWVT 243
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ V+ +CA G++IH GL +S + AL +Y KC L+EA F+ +
Sbjct: 244 IVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIA 303
Query: 180 D--RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEA 233
++++AWN +I+ YA G +A +F+ M + V++ ++SG +H G
Sbjct: 304 QNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAG 363
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
L+ F M +I SV P H C ++++
Sbjct: 364 LNHFNDMG---------TIHSVEPRVE-----------HYAC--------------VVDL 389
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH-EMQRLKV--PPND 350
+ G + +A +L QM + + +V G L ++H+ + + +RL V P N
Sbjct: 390 LGRAGRLVEAKELISQM---PMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNS 446
Query: 351 ITFIGLLSACAHTGFWNE-----GLMYFDSMKRD 379
++ L + A G W E L+ + MK+
Sbjct: 447 GNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKS 480
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 191/525 (36%), Positives = 299/525 (56%), Gaps = 38/525 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +L SC+NL L +IH +KY + ++ K+I C + L YA L EP
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+ F++N ++R Y+ + ++ ++ +M+R + PD F+ FVIK+
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRK----GFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS---- 191
G Q+H K GL+SH L+ +YG C + A KVF+EM ++VAWN +I+
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 192 ---------------------------GYARLGQMKKARMLFDKMPYTTIVSWTAMISGY 224
GY + G+++ A+ +F +MP+ VSW+ MI G
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT 284
H GS+ E+ FR++Q G+ P+E+S+ VL AC+Q GS E G+ +H + +K
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 285 VICNALIEMYIKCGCINQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+ NALI+MY +CG + A +F+ M E R +VSW+++I GLA HG+ +A+ LF+EM
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
V P+ I+FI LL AC+H G EG YF MKR +HIE +IEHYGC+VDL GR+G+L
Sbjct: 365 YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ 424
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A + I +MP+ P A +W +LL +C ++ N+E+A + L L+P ++G+ VLLSN YA
Sbjct: 425 KAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYA 484
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
G+W+DV+ +RK + + +KKT SL+EV + +F +G+ K
Sbjct: 485 TAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKK 529
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 201/518 (38%), Positives = 308/518 (59%), Gaps = 24/518 (4%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS-------- 66
++ + + ++ E+ +IH IL++ N L+ V N AYAS
Sbjct: 28 EKLAVFIDNSHSVDEVLQIHAAILRH-----NLLIHPRYPVLNLKLHRAYASHGKIRHSL 82
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
LF Q +P++FL+ A I + N L A LY Q+L S I P++FT ++KS
Sbjct: 83 ALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL-----SSQINPNEFTFSSILKS 137
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
C+ GK IH HV KFGL L+D+Y K +++ A KVF+ M +R +V+
Sbjct: 138 CS----TKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSS 193
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-I 245
+I+ YA+ G ++ AR LFD+M IVSW MI GY+ G ++AL +F+++ G
Sbjct: 194 TAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKP 253
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+PDEI++V+ L AC+Q+G+LE G WIH++ + + + +C ALI+MY KCG + +A
Sbjct: 254 KPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVL 313
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTG 364
+F+ +D+V+W+ +I G A HG + A+ LF EMQ + + P DITFIG L ACAH G
Sbjct: 314 VFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAG 373
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
NEG+ F+SM +++ I+ KIEHYGCLV LLGRAG+L +A II+ M M+ D+ +W S+
Sbjct: 374 LVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSV 433
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L SC+ + + E+L+ ++G YVLLSNIYA G +E V+++R L++ K +
Sbjct: 434 LGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIV 493
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
K PG S IE++N+V EF +GD K+I+ +L ++
Sbjct: 494 KEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMS 531
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 189/504 (37%), Positives = 300/504 (59%), Gaps = 12/504 (2%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVKEPNVFL 79
+ C ++ +LK+ H Q+L L +F +++++ C+ G L +A LF+Q++ P + +
Sbjct: 13 EKCRHMKQLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICI 72
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
N MI+A+ I +Y QML + + PD +TLP+V+K+CAGL LG+
Sbjct: 73 CNTMIKAFVLKGKLINTIQIYSQMLENG-----LYPDNYTLPYVLKACAGLQSCHLGESA 127
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H K G N L+ +Y + A +F+EM V+W +ISGYA++G +
Sbjct: 128 HGQSVKLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDV 187
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
+ ARMLFD+ P W ++ISGY + E L +FR MQ G+EPDE +VS+L AC
Sbjct: 188 ETARMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCAC 247
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A LG++E+G W+H Y D+ + LI+MY KCG ++ A +LFD M +RD + W+
Sbjct: 248 AHLGAMEIGVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWN 307
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I G+A +G A+ LF EM++ V P+DITFI + +AC+++G +E + +SM
Sbjct: 308 AMISGMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTV 367
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD----AKIWGSLLSSCRTYSNLE 435
+++E K EHYGC+VDLLGRAG L +A +I +MP A W +LLS+C ++ E
Sbjct: 368 YNMEPKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSHGQTE 427
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A A + L LE +G YVLLSN+YA G+ + V R+RK++ ++ + K PGCS +++N
Sbjct: 428 VAEDAAQRLFHLE-HHSGAYVLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCSSVKIN 486
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLE 519
V EF++G++T ++++ +LE
Sbjct: 487 GVVHEFIAGEETHLQMEEVHRVLE 510
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 204/551 (37%), Positives = 315/551 (57%), Gaps = 54/551 (9%)
Query: 6 GALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQ--SNFLVTKMIDVCNSGGDLA 63
L + LE V +++ C L+ L+ H + + L + + F ++K++ C S A
Sbjct: 10 ATLPREALEAHIVSLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLASCVSAPAPA 69
Query: 64 YASL--------LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR--DPRTGSLI 113
A LF Q+ +P F YN++IRA A+ +Y++MLR PR
Sbjct: 70 AAQAAASSYARNLFDQIPDPTAFCYNSLIRALPAAG-SAPALAVYRRMLRAGSPR----- 123
Query: 114 LPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHK 173
P+ FTL F +K+CA + P G+Q+HA + GL + + + LL+LY KC+
Sbjct: 124 -PNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCE------- 175
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY-TTIVSWTAMISGYTHIGSYAE 232
Q+ AR +FD M +V+W+AM+SGY+ +G E
Sbjct: 176 ------------------------QVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNE 211
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
AL +FR+MQ VG+EPDE+++VSV+ ACA+ G+L+LG+W+H Y D+ + + ALI+
Sbjct: 212 ALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALID 271
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
MY KCG I +A +FD MVE+D +WS +I G A HG A+ LF M LKV PN++T
Sbjct: 272 MYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVT 331
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
FIG+LSACAH+G +G Y+ M+ + I+ +E+YGC+VDLL R+G LD A + + M
Sbjct: 332 FIGVLSACAHSGLVEDGRRYWSIMQ-NLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGM 390
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVS 472
P+ P++ IW +LL +C++ + ++IA A + LL LEP + NYVLLSN+YA + +W+ VS
Sbjct: 391 PVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVS 450
Query: 473 RMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA--KD 530
+R+ ++ K++ G S IE+N + EFV DD+ P +++I +L +A RA K
Sbjct: 451 YLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKP 510
Query: 531 VIDIMYEDIGE 541
+ D+GE
Sbjct: 511 WTAAVLHDVGE 521
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 196/538 (36%), Positives = 310/538 (57%), Gaps = 43/538 (7%)
Query: 10 IKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS 66
IK V ++ C +L+ L K+IH ++ + +V ++++ G++ A
Sbjct: 217 IKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAH 276
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIK 125
LF+++ +V +NA+I Y+ N + A+ + +M +R I P+ T+ V+
Sbjct: 277 KLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG------IKPNSITMVSVLP 330
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA L G+QIH + + G +S+ + NAL+++Y
Sbjct: 331 ACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMY----------------------- 367
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
A+ G + A LF++MP +V+W A+ISGY+ G EAL +F +MQ GI
Sbjct: 368 --------AKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGI 419
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+PD +IVSVLPACA +LE G+ IH Y ++ V+ L+++Y KCG +N A +
Sbjct: 420 KPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQK 479
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
LF++M E+DVVSW+T+I HG A+ LF +MQ + I F +L+AC+H G
Sbjct: 480 LFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGL 539
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
++GL YF MK D+ + K+EHY CLVDLLGRAG LD+A II+ M ++PDA +WG+LL
Sbjct: 540 VDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALL 599
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+CR + N+E+ A +HL L+P++ G YVLLSNIYA+ RWEDV+++RK+++ K +KK
Sbjct: 600 GACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKK 659
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV--IDIMYEDIGE 541
PGCS++ V+ +VQ F+ GD T P + I+ +LE+L +A V ++ +D+ E
Sbjct: 660 QPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEE 717
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 178/351 (50%), Gaps = 38/351 (10%)
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
N ++ I Y N + A+ LY QM RTG I PDK VIK+C
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQM---QRTG--INPDKLVFLSVIKACGSQSDLQA 138
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+++H + G +S I AL +Y KC L A +VF+ M RD+V+WN +I+GY++
Sbjct: 139 GRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQ 198
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
GQ PY EAL +F +MQ+ GI+P+ ++VSV
Sbjct: 199 NGQ-----------PY--------------------EALALFSEMQVNGIKPNSSTLVSV 227
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+P CA L +LE G+ IH Y ++ + ++ N L+ MY KCG +N A +LF++M RDV
Sbjct: 228 MPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDV 287
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
SW+ +IGG + + + H+A+ F+ MQ + PN IT + +L ACAH +G
Sbjct: 288 ASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGY 347
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
R + + LV++ + G ++ A + E MP K + W +++S
Sbjct: 348 AIRSGFESNDVVG-NALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIIS 396
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
C NQ +Q + + V W I G +G +KA+ L+++MQR + P+ + F+ ++
Sbjct: 69 ACANQ-TQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVI 127
Query: 358 SACAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
AC G ++ D + R E + L + + G L+ A + + MP K
Sbjct: 128 KACGSQSDLQAGRKVHEDIIARG--FESDVIVGTALASMYTKCGSLENARQVFDRMP-KR 184
Query: 417 DAKIWGSLLS 426
D W ++++
Sbjct: 185 DVVSWNAIIA 194
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 204/551 (37%), Positives = 315/551 (57%), Gaps = 54/551 (9%)
Query: 6 GALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQ--SNFLVTKMIDVCNSGGDLA 63
L + LE V +++ C L+ L+ H + + L + + F ++K++ C S A
Sbjct: 59 ATLPREALEAHIVSLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLASCVSAPAPA 118
Query: 64 YASL--------LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR--DPRTGSLI 113
A LF Q+ +P F YN++IRA A+ +Y++MLR PR
Sbjct: 119 AAQAAASSYARNLFDQIPDPTAFCYNSLIRALPAAG-SAPALAVYRRMLRAGSPR----- 172
Query: 114 LPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHK 173
P+ FTL F +K+CA + P G+Q+HA + GL + + + LL+LY KC+
Sbjct: 173 -PNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCE------- 224
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY-TTIVSWTAMISGYTHIGSYAE 232
Q+ AR +FD M +V+W+AM+SGY+ +G E
Sbjct: 225 ------------------------QVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNE 260
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
AL +FR+MQ VG+EPDE+++VSV+ ACA+ G+L+LG+W+H Y D+ + + ALI+
Sbjct: 261 ALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALID 320
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
MY KCG I +A +FD MVE+D +WS +I G A HG A+ LF M LKV PN++T
Sbjct: 321 MYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVT 380
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
FIG+LSACAH+G +G Y+ M+ + I+ +E+YGC+VDLL R+G LD A + + M
Sbjct: 381 FIGVLSACAHSGLVEDGRRYWSIMQ-NLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGM 439
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVS 472
P+ P++ IW +LL +C++ + ++IA A + LL LEP + NYVLLSN+YA + +W+ VS
Sbjct: 440 PVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVS 499
Query: 473 RMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA--KD 530
+R+ ++ K++ G S IE+N + EFV DD+ P +++I +L +A RA K
Sbjct: 500 YLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKP 559
Query: 531 VIDIMYEDIGE 541
+ D+GE
Sbjct: 560 WTAAVLHDVGE 570
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 180/461 (39%), Positives = 280/461 (60%), Gaps = 17/461 (3%)
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
+ YA LF Q+ +PN+ L+N+M R Y + Y ++ +M + + + L
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYAQSESYR---EIFCEMFERNVVAWTSMINGYILS 57
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
+ S L + + + + N ++ Y + +++EA K+F EM +R
Sbjct: 58 ADLVSARRLFDLAPERDV-------------VLWNIMVSGYIEGGDMVEARKLFHEMPNR 104
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM- 240
D++ WN ++ GYA G ++ LF++MP I SW A+I GY H G + E L F++M
Sbjct: 105 DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRML 164
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ P++ ++V+VL ACA+LG+L+LG+W+H+Y + + L + NAL++MY KCG I
Sbjct: 165 SESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGII 224
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A +F M +D++SW+T+IGGLA H + A++LF +M+ P+ ITFIG+L AC
Sbjct: 225 ENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCAC 284
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
H G +G YF SM D+ I +IEHYGC+VD+L RAGRL+QA+ + +MP++ D I
Sbjct: 285 THMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVI 344
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
W LL +CR Y N+E+A +A++ L+ LEP++ NYV+LSNIY GRWEDV+R++ +R
Sbjct: 345 WAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRD 404
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
KK PGCSLIEVN+ V EF S D+ P +++I+ +L L
Sbjct: 405 TGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGL 445
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 44/316 (13%)
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
+ G++ LF+++ E N+F +NA+I Y +N L+ + +K+ML + S + P+
Sbjct: 118 TNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSE----SDVPPND 173
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
TL V+ +CA L LGK +H + GLK + NAL+D+Y KC + A VF
Sbjct: 174 ATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRG 233
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M +D+++WN LI G A + A+AL++F
Sbjct: 234 MDTKDLISWNTLIGGLAMHSRG-------------------------------ADALNLF 262
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIK 296
QM+ G +PD I+ + +L AC +G +E G + D ++ + +++M +
Sbjct: 263 FQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLAR 322
Query: 297 CGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFH-EMQRL--KVPPNDIT 352
G + QA +M VE D V W+ ++G + +K + L +QRL P N
Sbjct: 323 AGRLEQAMAFVRKMPVEADGVIWAGLLGAC----RIYKNVELAELALQRLIELEPKNPAN 378
Query: 353 FIGLLSACAHTGFWNE 368
++ L + G W +
Sbjct: 379 YVMLSNIYGDAGRWED 394
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 176/415 (42%), Positives = 265/415 (63%), Gaps = 27/415 (6%)
Query: 114 LPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHK 173
LP+KFT PFV+K+CAG+ +LGK +H V KFG +N L+ +Y C
Sbjct: 7 LPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCC-------- 58
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
G ++ AR +FD+M + VSW+AMI GY +G ++A
Sbjct: 59 -------------------RGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDA 99
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
+++FR+MQ+ G+ PDEI++VSVL AC LG+LELG+W+ Y +K + + + NALI+M
Sbjct: 100 INLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDM 159
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
+ KCG +++A+ LF M ER++VSW++VIGGLA HG+ +A+ +F EM R V P+D+ F
Sbjct: 160 FAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVF 219
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
IGLLSAC+H+G ++G YFDSM++D I KIEHYGC+VD+L RAG + +AL ++EMP
Sbjct: 220 IGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMP 279
Query: 414 MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSR 473
+ P+ +W +L+++CR + L++ L+ EP NYVLLSNIYAK WE +R
Sbjct: 280 IDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTR 339
Query: 474 MRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
+R+ + K MKK PG ++IE++NE+ EFV+GD + K+I+ +++ + RA
Sbjct: 340 IREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRA 394
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 157/335 (46%), Gaps = 49/335 (14%)
Query: 8 LSIKELEDRFV-P-ILQSCENLIEL---KKIHTQILKYLLSQ----SNFLVTKMIDVCNS 58
L K+L ++F P +L++C + L K +H ++K+ N LV M C
Sbjct: 2 LERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLV-HMYCCCRG 60
Query: 59 G-GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
G G + +A +F ++ + + ++AMI Y AINL+++M + PD+
Sbjct: 61 GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKG-----VCPDE 115
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
T+ V+ +C GL LGK + ++V K ++ + NAL+D++ KC ++ +A +F
Sbjct: 116 ITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRS 175
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M +R+IV+W ++I G A G+ EA+ VF
Sbjct: 176 MRERNIVSWTSVIGGLAMHGR-------------------------------GVEAVAVF 204
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN-HLLRRTVICNALIEMYIK 296
+M G+ PD++ + +L AC+ G ++ G+ K+ ++ + +++M +
Sbjct: 205 EEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCR 264
Query: 297 CGCINQASQLFDQM-VERDVVSWSTVIGGLANHGK 330
G + +A + +M ++ + V W T+I HG+
Sbjct: 265 AGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGE 299
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 197/577 (34%), Positives = 315/577 (54%), Gaps = 77/577 (13%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+ ++++C N+ +LK+IH + + LS + F++TK+I+ S L YA+ +F Q +EP+
Sbjct: 10 LALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDG 69
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F+YNAMIRAY+++ +AI++Y +M R IL DK+T PFV K+CA GK
Sbjct: 70 FIYNAMIRAYSSSQTPCVAISIYNKM----RACQNILGDKYTYPFVFKACASQFAVEKGK 125
Query: 138 QIHAHVCKFGLKSHSITE-------------------------------NALLDLYGKCD 166
++H + + G + + NAL+ Y +
Sbjct: 126 EVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQG 185
Query: 167 ELIEAHKVFEEMTDRDIVAWNN-------------------------------------- 188
++++ VF+EM + V N
Sbjct: 186 MVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKL 245
Query: 189 ---LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
LI+ Y + G + AR LFD++P V W ++I GY IGS E +++ R+M + +
Sbjct: 246 EAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNL 305
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+PD ++ VL ACAQ+G+ LG W+H + +K + I ALI+MY KCG I A +
Sbjct: 306 KPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIWD-VFIGTALIDMYAKCGFIGAARK 364
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+FDQM ER+V +W+ ++ G A+HG+A AI LF EM+ P+ ITF+ +L ACAH+G
Sbjct: 365 VFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGL 424
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
G YFD M + + I ++EHYGC+VDLLGRAG L +A +I+ M ++P+ +WG+LL
Sbjct: 425 VENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALL 484
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
S+C + N+EI A H++ L D G+YV+L+N+YA R+ V +R+++ K + K
Sbjct: 485 SACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICK 544
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+ GCS+IE+ + V EFV D P ++I+ +L+ L+
Sbjct: 545 SHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELS 581
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/515 (38%), Positives = 311/515 (60%), Gaps = 16/515 (3%)
Query: 17 FVPILQSCENLIELKKIHTQIL---KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV L C L LK++H + + + F + + + S L YA LF
Sbjct: 13 FVAALHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSC--LPYARRLFDATP 70
Query: 74 EPNVFLYNAMIRAYTNNHLYGL-----AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
PNVFLY+AM+ AY + ++ L+ +MLR R P++F P V+++ A
Sbjct: 71 SPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPA----PNQFVYPLVLRA-A 125
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
+ L + IH H CK G H +LLD Y + + +A K+F+ +TDR++V+W
Sbjct: 126 CAIGVQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDRNVVSWTA 185
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L+SGYAR G++ A +LF++MP + +W A+I+G T G + EA+ +FR+M G P+
Sbjct: 186 LVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGFRPN 245
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++ +L AC LG L++G+ IH Y ++ + + + N LI+MY KCG + +A +FD
Sbjct: 246 GTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFD 305
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+R + +W+++I LA HG + AI +F+ M+ V P+++TF+GLL+AC H GF +E
Sbjct: 306 AFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDE 365
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
GL YF+ M +H IE +IEHYGC+VDLL RAGR A+N I +M ++PD IWGSLL++C
Sbjct: 366 GLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNAC 425
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK-SMKKTP 487
R + +LE+A A+ +LL L P + V+L+N+Y++ G WE+V ++RKL++ + KK P
Sbjct: 426 RIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLP 485
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
GCS IEV+ + + F SGDD P +DI+ L+ LA
Sbjct: 486 GCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKLA 520
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 186/501 (37%), Positives = 300/501 (59%), Gaps = 5/501 (0%)
Query: 34 HTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLY 93
H Q L + S F+V + + G +A+A LF + +V +N +I Y + L
Sbjct: 146 HVQKLGF--SADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLP 203
Query: 94 GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI 153
A+ L+ ++ D G+ + PD+ T+ + CA + LGK++H V G++
Sbjct: 204 REALELFWRLAED---GNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVR 260
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
NA++D+Y KC L A+ VFE +++R V+W +I G+ARLG M+ ARMLFD+MP
Sbjct: 261 LMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERD 320
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
+ W A+++GY EA+ +F +MQ ++P+EI++V++L AC+QLG+LE+G W+H
Sbjct: 321 VFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHH 380
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
Y D++ L + +L++MY KCG I +A +F+++ ++ ++W+++I GLANHG A +
Sbjct: 381 YIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADE 440
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
AI F M L + P++ITFIG+LSAC H G G +F M +H+E K++HY C++
Sbjct: 441 AIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMI 500
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
DLLGRAG LD+A ++ MPM PDA +WG+L +CR + N+ + A L+ L+P D+G
Sbjct: 501 DLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSG 560
Query: 454 NYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKD 513
YVLL+N+YA+ + ++R ++R ++K PGCS IE+N V EF+ D +
Sbjct: 561 IYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTNA 620
Query: 514 IFWLLELLALHQDRAKDVIDI 534
I+ L + L ++IDI
Sbjct: 621 IYDCLHEITLQMRHIANLIDI 641
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 202/430 (46%), Gaps = 76/430 (17%)
Query: 62 LAYASLLFKQVKEP--NVFLYNAMIRAYT---NNHLYGL-AINLYKQMLRDPRTGSLILP 115
L +A + + P + F YNA RA + + HL + LY+ +L +GS P
Sbjct: 64 LLHALAILASLPSPPDSAFPYNAAFRALSLCPHQHLVDRHCLPLYRALLH---SGS-ARP 119
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
D T PF+IK+CA L S G + HV K G + NA + + + A ++F
Sbjct: 120 DHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLF 179
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
+E RD+V+WN LI GY R G ++A LF W G
Sbjct: 180 DESPVRDVVSWNTLIGGYVRSGLPREALELF----------WRLAEDGN----------- 218
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMY 294
+ PDE++++ + CAQ+G LELG+ +H + D N +R TV + NA+++MY
Sbjct: 219 --------AVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVD-NKGVRCTVRLMNAVMDMY 269
Query: 295 IKCGCI-------------------------------NQASQLFDQMVERDVVSWSTVIG 323
+KCG + A LFD+M ERDV W+ ++
Sbjct: 270 VKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMA 329
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
G + + +AI LFHEMQ+ KV PN+IT + LLSAC+ G G+ + R H +
Sbjct: 330 GYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR-HKLH 388
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+ LVD+ + G + +A+ + E+P++ +A W S++ + + + A+ +
Sbjct: 389 LSVALGTSLVDMYAKCGNIKKAICVFNEIPVQ-NALTWTSMICGLANHGHADEAIEYFQR 447
Query: 444 L--LVLEPED 451
+ L L+P++
Sbjct: 448 MIDLGLQPDE 457
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/528 (36%), Positives = 311/528 (58%), Gaps = 11/528 (2%)
Query: 12 ELEDRFVP-ILQSCENL--IEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
E+++ P +L++C + +L K+IH +LK L + F+ ++ + + YA L
Sbjct: 121 EVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARL 180
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F ++ E +V ++ MIR+ + N + +A+ L ++M + P + + ++
Sbjct: 181 VFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM-----NFMQVRPSEVAMVSMVNLF 235
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSH--SITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
A +GK +HA+V + H T ALLD+Y KC L A ++F +T + +V+
Sbjct: 236 ADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 295
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W +I+G R ++++AR LFD ++ WTAM+S Y +A ++F QM+ G+
Sbjct: 296 WTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 355
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
P +++IVS+L CA G+L+LG+W+H Y DK + ++ AL++MY KCG IN A +
Sbjct: 356 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGR 415
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
LF + + RD+ W+ +I G A HG +A+ +F EM+R V PNDITFIGLL AC+H G
Sbjct: 416 LFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGL 475
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
EG F+ M + +IEHYGC+VDLLGRAG LD+A +I+ MP+KP+ +WG+L+
Sbjct: 476 VTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 535
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
++CR + N ++ +A LL +EPE+ G VL+SNIYA RW D + +RK +++ MKK
Sbjct: 536 AACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKK 595
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
PG S+IEVN V EF+ GD + P ++ I +L + + A V D
Sbjct: 596 EPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPD 643
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 174/382 (45%), Gaps = 75/382 (19%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +I +YT + A+N+Y Q+ + D F P V+K+C + LGK+I
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMD-----FEVDNFMAPSVLKACGQVSWTQLGKEI 146
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H V K GL NAL+ +YG+C + A VF++M +RD+V+W+ +I +R +
Sbjct: 147 HGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKE- 205
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
FD AL++ R+M + + P E+++VS++
Sbjct: 206 ------FDM------------------------ALELIREMNFMQVRPSEVAMVSMVNLF 235
Query: 260 AQLGSLELGEWIHMYCDKN----HLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
A ++ +G+ +H Y +N H+ T AL++MY KCG + A QLF+ + ++ V
Sbjct: 236 ADTANMRMGKAMHAYVIRNSNNEHMGVPTT--TALLDMYAKCGHLGLARQLFNGLTQKTV 293
Query: 316 VSWSTVIGG----------------------------LANHGKAH---KAIHLFHEMQRL 344
VSW+ +I G L+ + +A+ +A +LF +M+
Sbjct: 294 VSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 353
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
V P +T + LLS CA G + G + S +E LVD+ + G ++
Sbjct: 354 GVRPTKVTIVSLLSLCAVAGALDLG-KWVHSYIDKERVEVDCILNTALVDMYAKCGDINA 412
Query: 405 ALNIIEEMPMKPDAKIWGSLLS 426
A + E + D +W ++++
Sbjct: 413 AGRLFIE-AISRDICMWNAIIT 433
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W +I+ YT AL+V+ Q++ + E D SVL AC Q+ +LG+ IH +
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
K L R + NAL+ MY +C C+ A +FD+M+ERDVVSWST+I L+ + + A+
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH-KIEHYGCLVDL 395
L EM ++V P+++ + +++ A T G + R+ + EH + L+D+
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ G L A + + K W ++++ C + LE A
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVS-WTAMIAGCIRSNRLEEA 312
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/515 (38%), Positives = 310/515 (60%), Gaps = 16/515 (3%)
Query: 17 FVPILQSCENLIELKKIHTQIL---KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV L C L LK++H + + + F + + + S L YA LF
Sbjct: 231 FVAALHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSC--LPYARRLFDATP 288
Query: 74 EPNVFLYNAMIRAYTNNHLYGL-----AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
PNVFLY+AM+ AY + ++ L+ +MLR R P++F P V+++
Sbjct: 289 SPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPA----PNQFVYPLVLRAAC 344
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
+ L + IH H CK G H +LLD Y + + +A K+F+ +TDR++V+W
Sbjct: 345 AIGV-QLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDRNVVSWTA 403
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L+SGYAR G++ A +LF++MP + +W A+I+G T G + EA+ +FR+M G P+
Sbjct: 404 LVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGFRPN 463
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++ +L AC LG L++G+ IH Y ++ + + + N LI+MY KCG + +A +FD
Sbjct: 464 GTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFD 523
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+R + +W+++I LA HG + AI +F+ M+ V P+++TF+GLL+AC H GF +E
Sbjct: 524 AFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDE 583
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
GL YF+ M +H IE +IEHYGC+VDLL RAGR A+N I +M ++PD IWGSLL++C
Sbjct: 584 GLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNAC 643
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK-SMKKTP 487
R + +LE+A A+ +LL L P + V+L+N+Y++ G WE+V ++RKL++ + KK P
Sbjct: 644 RIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLP 703
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
GCS IEV+ + + F SGDD P +DI+ L+ LA
Sbjct: 704 GCSWIEVDRKTRRFYSGDDGHPESEDIYDTLDKLA 738
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 168/382 (43%), Positives = 256/382 (67%), Gaps = 1/382 (0%)
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+LG Q+H+ + + GL S + +L+ Y C + A VF++ TD+DI WN +ISGY
Sbjct: 86 TLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGY 145
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV-GIEPDEISI 252
+ G + AR LFD MP +VSWT +I Y + EA++VFR+MQ+ GIEPD +++
Sbjct: 146 VKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVAL 205
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+SVL AC LG+++LGEW+H + + L + + NA+I+MY+K GC+ +A ++F+ M +
Sbjct: 206 LSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQ 265
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+ VV+W+TVI G A HG +AI +F M+ V PND+TF+ +LSAC+H G + G Y
Sbjct: 266 KSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWY 325
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F M + I+ ++EHYGC+VDLLGRAG L +A +++++MP K +A IWG+LL++ RT+
Sbjct: 326 FKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHG 385
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
+ E+ A+ HL+ LEP ++GNY+LLSNIYA+ RW+DVS++RK ++ + ++ PG S I
Sbjct: 386 DAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLRNVPGASSI 445
Query: 493 EVNNEVQEFVSGDDTKPFLKDI 514
EV+ V EF S D + P L I
Sbjct: 446 EVDGMVHEFTSRDGSHPCLHKI 467
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 147/366 (40%), Gaps = 61/366 (16%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
++H+ I++ L+ + +I S G +A A +F Q + ++F +N MI Y +
Sbjct: 90 QLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVKSG 149
Query: 92 LYGLA------------------INLYKQM---------LRDPRTGSLILPDKFTLPFVI 124
A I Y QM R + I PD L V+
Sbjct: 150 NLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVL 209
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
+C L LG+ +H V + GL NA++D+Y K + +A +VFE M + +V
Sbjct: 210 SACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVV 269
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
W +I+G+A G +A +F R+M+M
Sbjct: 270 TWTTVIAGFALHGLGLEAIEMF-------------------------------RRMEMEN 298
Query: 245 IEPDEISIVSVLPACAQLGSLELGEW-IHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
+ P++++ +++L AC+ +G +LG W + + + +R ++++ + G + +A
Sbjct: 299 VAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEA 358
Query: 304 SQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
L M + + W ++ HG A + L+ P N +I L + A
Sbjct: 359 QDLVQDMPFKANAAIWGALLAAARTHGDAELGKQALLHLIELE-PHNSGNYILLSNIYAE 417
Query: 363 TGFWNE 368
W++
Sbjct: 418 QERWDD 423
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/513 (38%), Positives = 306/513 (59%), Gaps = 14/513 (2%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKY---LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
++ ++ +++ E+ +IH IL++ L + L K+ S G + ++ LF Q
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+P++FL+ A I + N L A LY Q+L S I P++FT ++KSC+
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLL-----SSEINPNEFTFSSLLKSCS--- 141
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
GK IH HV KFGL L+D+Y K +++ A KVF+ M +R +V+ +I+
Sbjct: 142 -TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEI 250
YA+ G ++ AR LFD M IVSW MI GY G +AL +F+++ G +PDEI
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++V+ L AC+Q+G+LE G WIH++ + + +C LI+MY KCG + +A +F+
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEG 369
+D+V+W+ +I G A HG + A+ LF+EMQ + + P DITFIG L ACAH G NEG
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
+ F+SM +++ I+ KIEHYGCLV LLGRAG+L +A I+ M M D+ +W S+L SC+
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ + + E+L+ L +++G YVLLSNIYA G +E V+++R L++ K + K PG
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
S IE+ N+V EF +GD K+I+ +L ++
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKIS 533
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 299/514 (58%), Gaps = 27/514 (5%)
Query: 18 VPILQSCENLIELKKIH----TQILKYLLSQSNFLVTKMIDVCNS------------GGD 61
+ +++ C++L +L ++H T L + L S+ L+T ++ +
Sbjct: 19 ITVIRQCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASPTTPAAL 78
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYT--NNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
YA +F ++ P+ F YN MIRA+T ++ L L I + + L P PD T
Sbjct: 79 TGYALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVP-------PDTHT 131
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
PF +K+C+ L SL + +H+ KFG + N L+ +Y L A +VF E +
Sbjct: 132 FPFCLKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETS 191
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA-EALDVFR 238
+D+V++N LI G+ ++G +AR LFDKMP VSW +++GY G +A+ +F
Sbjct: 192 LKDVVSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFN 251
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+M + + PD I++VS L ACAQLG LE G+ IH+Y +N + + L+++Y KCG
Sbjct: 252 RMLISTVRPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCG 311
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
CI A ++F+ ++++ +W+ ++ GL HG+ H ++H F M + P+ ++F+G+L
Sbjct: 312 CIETAREIFESSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILV 371
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
C H G E +F M+ + + +++HYGC+ DLLGRAG + +A+ +IE MPM D
Sbjct: 372 GCGHAGLVCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDV 431
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
+WG +L CR + N+EIA A E+++ L PED G Y ++++IYA GRWEDV+R+R+L+
Sbjct: 432 FVWGGVLGGCRIHGNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLM 491
Query: 479 RSKSMKKTPGCSLIEVNNEV-QEFVSGDDTKPFL 511
S+ +KK PGCSL+++NN V FV+G + ++
Sbjct: 492 HSRQVKKNPGCSLVQLNNGVFHGFVAGSASSSYI 525
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/501 (38%), Positives = 299/501 (59%), Gaps = 11/501 (2%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS-GGDLAYASLLFKQVKEPNVFLYNA 82
C + +I+ I+K L+ + T+ + C S G++ YA LF ++ PN++ +N
Sbjct: 38 CTTINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNT 97
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+IRA++ + AI+L+ ML S I P T P V K+ A L G Q+H
Sbjct: 98 IIRAFSRSSTPQFAISLFVDMLY-----SQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGR 152
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFE----EMTDRDIVAWNNLISGYARLGQ 198
V K GL++ N ++ +Y + EA +VF+ E+ D D+VA N++I GYA+ G+
Sbjct: 153 VVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGE 212
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ ++R LFD M T VSW +MISGY G EAL++F +MQ+ G E E ++VS+L A
Sbjct: 213 IDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNA 272
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA LG+L+ G+W+H Y +NH ++ A+I+MY KCG + A ++F+ R + W
Sbjct: 273 CAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCW 332
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKV-PPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
+++I GLA +G +A F +++ K+ P+ ++FIG+L+AC H G N+ YF+ M
Sbjct: 333 NSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMM 392
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ IE I+HY C+VD+LG+AG L++A +I+ MP+KPDA IWGSLLSSCR + N++IA
Sbjct: 393 NKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIA 452
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
A + + L P D YVL+SN++A ++E+ R L++ +K PGCS IE+ E
Sbjct: 453 RRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGE 512
Query: 498 VQEFVSGDDTKPFLKDIFWLL 518
V EF++G P ++I+ LL
Sbjct: 513 VHEFIAGGRLHPKTQEIYHLL 533
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 138/326 (42%), Gaps = 45/326 (13%)
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
+ K I H C L++H T N +Y H + +T I + L +
Sbjct: 21 ISKFISNHPCLTMLQNHCTTINHFHQIY--------PHIIKTGLTLNPIASTRALTFCAS 72
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
G + A LF +MP + SW +I ++ + A+ +F M I+P ++ S
Sbjct: 73 PSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPS 132
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM--------------------- 293
V A AQLG G +H K L ICN +I M
Sbjct: 133 VFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLEL 192
Query: 294 --------------YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
Y KCG I+++ LFD M+ R VSW+++I G +GK +A+ LF+
Sbjct: 193 YDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFN 252
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
+MQ ++ T + LL+ACAH G G D +KR+ H E + ++D+ +
Sbjct: 253 KMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRN-HFELNVIVVTAIIDMYCKC 311
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLL 425
G ++ A+ + E P + W S++
Sbjct: 312 GSVENAVEVFETCPRR-GLSCWNSII 336
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 306/527 (58%), Gaps = 15/527 (2%)
Query: 14 EDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F L +C L ++ + IH+ I K ++ + ++D+ + G++ A +F
Sbjct: 152 EYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFD 211
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + NV +N++I Y N A+ +++ ML S + PD+ TL VI +CA L
Sbjct: 212 EMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLE-----SWVEPDEVTLASVISACASL 266
Query: 131 LCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
+G+++HA V K L++ I NA +D+Y KC + EA +F+ M R+++A ++
Sbjct: 267 SAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+SGYA K AR++F KM +VSW A+I+GYT G EAL +F ++ + P
Sbjct: 327 VSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT------VICNALIEMYIKCGCINQA 303
+ ++L ACA L L LG H++ K+ ++ + N+LI+MY+KCGC+ +
Sbjct: 387 YTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+F +M+ERD VSW+ +I G A +G ++A+ LF EM P+ IT IG+LSAC H
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHA 506
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
GF EG YF SM RD + +HY C+VDLLGRAG L++A +IIEEMP++PD+ IWGS
Sbjct: 507 GFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGS 566
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL++C+ + N+ + E L +E ++G YVLLSN+YA+ G+W D +RKL+R + +
Sbjct: 567 LLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGV 626
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKD 530
K PGCS I++ F+ D + P K I LL++L + +D
Sbjct: 627 TKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMRQKQD 673
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 155/298 (52%), Gaps = 3/298 (1%)
Query: 121 PF--VIKSCAGLLCPSLG-KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
PF ++ SC L ++ + +HA V K G + +N L+D Y KC L + ++F++
Sbjct: 21 PFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDK 80
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M R++ WN++++G +LG + +A LF MP +W +M+SG+ EAL F
Sbjct: 81 MPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYF 140
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
M G +E + S L AC+ L + G IH K+ L I +AL++MY KC
Sbjct: 141 AMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKC 200
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G +N A Q+FD+M +R+VVSW+++I +G A +A+ +F M V P+++T ++
Sbjct: 201 GNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVI 260
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
SACA G + + + + I VD+ + R+ +A I + MP++
Sbjct: 261 SACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 213/487 (43%), Gaps = 99/487 (20%)
Query: 6 GALSIKELEDRFVPILQSCENL----IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD 61
G LS + F +L SC L I+++ +H ++K S F+ ++ID G
Sbjct: 11 GDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGS 70
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLILP----- 115
L LF ++ + NVF +N+++ T A +L++ M RD T + ++
Sbjct: 71 LEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH 130
Query: 116 --------------------DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
+++T + +C+GL + G QIH+ + K S
Sbjct: 131 DRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIG 190
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
+AL+D+Y KC + +A +VF+EM DR++V+WN+LI+ Y + G
Sbjct: 191 SALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPA---------------- 234
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
EAL VF+ M +EPDE+++ SV+ ACA L ++++G+ +H
Sbjct: 235 ---------------VEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARV 279
Query: 276 DKNHLLRRTVI-CNALIEMYIKCGCINQASQLFD-------------------------- 308
K LR +I NA ++MY KC I +A +FD
Sbjct: 280 VKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAA 339
Query: 309 -----QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-- 361
+M ER+VVSW+ +I G +G+ +A+ LF ++R V P TF +L ACA
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADL 399
Query: 362 ---HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
H G + K E I L+D+ + G +++ + +M M+ D
Sbjct: 400 ADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDC 458
Query: 419 KIWGSLL 425
W +++
Sbjct: 459 VSWNAMI 465
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 311/533 (58%), Gaps = 13/533 (2%)
Query: 10 IKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSGGDLAYASL 67
I L + +L C+++ ELK+IH + +SQ + +K++ + DL Y+
Sbjct: 9 IAFLNQTLISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYK 68
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
L V P F +N +IRA++N +I ++ +ML++ + PD T PF++K+
Sbjct: 69 LILNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNG-----VSPDYLTYPFLVKAT 123
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+ LL LG +H H+ K G + +N+L+ +Y C ++ A KVF+EM +++V WN
Sbjct: 124 SKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWN 183
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
++ GYA+ G + AR +F+ MP +VSW+++I GY Y EA+ +F +M G
Sbjct: 184 AMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMA 243
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+E+++VS L ACA LG+LE G +H Y +N L V+ +L++MY KCG I++A +F
Sbjct: 244 NEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVF 303
Query: 308 D--QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+ E DV+ W+ +IGGLA HG +A++LF EM+ + + P++IT++ LLS CAH G
Sbjct: 304 RACSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGL 363
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
E +FD + R H + K+EHY C+VD L RAG++ +A + +MP++P + + G+LL
Sbjct: 364 VEEAWYFFDCL-RKHGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALL 422
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
S C + L+IA + L+ L+P G YV LSNIYA RW+D +R+ + K +KK
Sbjct: 423 SGCMKHGKLDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVKK 482
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYED 538
+PG S IEV + F++ D T + IF +L L+ D+ K + D ++++
Sbjct: 483 SPGFSFIEVYGVLHRFMAHDKTHGDCEQIFMMLNLIV---DQMKPIEDYVHQE 532
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 300/506 (59%), Gaps = 9/506 (1%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
DR +L +C ++H +++ L + ++ + G L ++ L + K+
Sbjct: 25 DRAASLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKD 84
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P Y + I A+++ L+ + L ML + +LP TL + +C GL S
Sbjct: 85 PTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEG-----LLPTAHTLSASLPACRGL---S 136
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
LG+ +HA+ K L S ALL +Y + + A +F+EM D +V+ +++ YA
Sbjct: 137 LGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYA 196
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+G + AR LFD +P + W AMI GYT G EAL +FR+M EPDE+++V
Sbjct: 197 NMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVL 256
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVER 313
VL A AQLG++E G+W+H Y + ++ V + AL++MY KCG + A +F + +
Sbjct: 257 VLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNK 316
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+V W+ +I G A HG + KA+ +F +++ + P DITFIGLL+AC+H+G EG +F
Sbjct: 317 DIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFF 376
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM+ ++ I+ KIEHYGC+VDLLGRAG +++A ++++ + + PDA +W SLL++CR + N
Sbjct: 377 QSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKN 436
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+ + + L+ ++G Y+LLSNIYA G+WE+V+R+R ++++ ++K PGCS IE
Sbjct: 437 MALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIE 496
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
++ +V EFV+GD + P +I+ +L+
Sbjct: 497 IDRKVYEFVAGDMSHPCTDEIYAMLD 522
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 194/531 (36%), Positives = 297/531 (55%), Gaps = 40/531 (7%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFK 70
+E+ +V +L C +L K+IH QI K L + K++ C L YA LF
Sbjct: 1 MEEAWVSLLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFH 60
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
P+ F++N +IR+ + + +++ + Q+ R P + PD FT F +K+ A
Sbjct: 61 HFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQP----TLSPDSFTFAFALKAVANS 116
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD---------- 180
G Q+H+ + G +H L+ +Y +C + A +VF+EM++
Sbjct: 117 RHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVL 176
Query: 181 ---------------------RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA 219
R++ +WN +++GYA+ G++ AR +F +MP VSW+
Sbjct: 177 TAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWST 236
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
MI G+ H G + EA FR++ I +E+S+ VL ACAQ G+ E G+ +H + +K
Sbjct: 237 MIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAG 296
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLF 338
L + NALI+ Y KCG + A +F M V R +VSW+++I GLA HG +AI LF
Sbjct: 297 FLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLF 356
Query: 339 HEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
HEM+ V P+ ITFI LL AC+H+G EG F MK + IE IEHYGC+VDL GR
Sbjct: 357 HEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGR 416
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLL 458
A RL +A I EMP+ P+A IW +LL +C + N+E+A + L ++P+++G++VLL
Sbjct: 417 AARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLL 476
Query: 459 SNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
SN+YA G+W+DVS +R+ + SMKKTPG S+IE++ + FV+G+ KP
Sbjct: 477 SNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGE--KP 525
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 186/513 (36%), Positives = 296/513 (57%), Gaps = 14/513 (2%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
DR +L C + +IH ++ + Q + ++ + G L A L ++ +
Sbjct: 25 DRAAALLAGCASASRAAEIHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLRRTPD 84
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P Y + I A+++ L+ A+ L +ML R G +LP TL + +C C +
Sbjct: 85 PTAVFYTSAIHAHSSRGLHRAALALLSEMLLS-RHG--LLPTAHTLSASLPACG---CLA 138
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLISGY 193
+G+ +H + K L ALL +Y + E A +F+ M D +V+ ++S Y
Sbjct: 139 VGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCY 198
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A++GQ+ AR LFD +P +V W AM+ GYT G +EAL +FRQM G+EPDE+S+V
Sbjct: 199 AKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVV 258
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRR----TVICNALIEMYIKCGCINQASQLFDQ 309
L A AQLG+ E G W+H + R + AL++MY KCG + +A +F
Sbjct: 259 LALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRD 318
Query: 310 MV---ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
+ +RDVV+W+ +I G A HG++ +A+ F +++ + P DITFIG+L+AC+H+G
Sbjct: 319 LGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLV 378
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+EG F +M+ ++ I K+EHYGC+VDLLGRAGR+++A ++++ M KPDA +W SLL
Sbjct: 379 DEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLG 438
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+CR + NL + ++L+ ++G YVLLSN+YA G+W +V R+R ++R+ ++K
Sbjct: 439 ACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKE 498
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
PGCS +EV V EFV+GD + P +I+ LE
Sbjct: 499 PGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLE 531
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 280/451 (62%), Gaps = 9/451 (1%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+P V +++ R N L A + L + P+ T ++ +CA
Sbjct: 55 DPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAG------VEPNHITFITLLSACADFPSE 108
Query: 134 SL--GKQIHAHVCKFGLKS-HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
S +H + CK+GL + H + AL+D+Y KC +L A KVF + ++ V+WN ++
Sbjct: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+G+ R G+++ A LFD+MP +SWTA+I+G G +AL+ F QMQ G+ D +
Sbjct: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYV 228
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
SI++VL ACA LG+L LG W+H + I N+LI+MY +CGCI A Q+F +M
Sbjct: 229 SIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM 288
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+R +VSW+++I G A +G A +++ F+ MQ+ P+ +++ G L+AC+H G N+GL
Sbjct: 289 AKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGL 348
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
FD+MK H I +IEHYGC+VDL GRAGRL+ ALN+IEEMPMKP+ + GSLL++CRT
Sbjct: 349 ELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRT 408
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ ++ +A M+HL L+PE YVLLSNIYA G+W+ + +R+ ++++ ++K PG S
Sbjct: 409 HGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYS 468
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+E++ +V EFV+GD+ +I+ +L+LL
Sbjct: 469 SVEIDGKVHEFVAGDNYHADADNIYSMLDLL 499
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 159/387 (41%), Gaps = 70/387 (18%)
Query: 17 FVPILQSC-----ENLIELKKIHTQILKYLLSQSNFLV-TKMIDVCNSGGDLAYASLLFK 70
F+ +L +C E+ +H KY L + +V T +ID+ + L +A +F
Sbjct: 95 FITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFY 154
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDP---------------------- 107
+ N +N M+ + N LAI L+ +M RD
Sbjct: 155 NLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALEC 214
Query: 108 -----RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
R+G + D ++ V+ +CA L +LG +H V K + N+L+D+Y
Sbjct: 215 FHQMQRSG--VAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMY 272
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
+C + A +VF +M R +V+WN++I G+A ++
Sbjct: 273 SRCGCIEFARQVFVKMAKRTLVSWNSIIVGFA--------------------------VN 306
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLL 281
G+ E+L+ F MQ G +PD +S L AC+ G + G E + +
Sbjct: 307 GFAD-----ESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKIT 361
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
R ++++Y + G + A + ++M ++ + V +++ HG + A L
Sbjct: 362 PRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKH 421
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWN 367
+ +L P D ++ L + A G W+
Sbjct: 422 LFKLD-PEGDAYYVLLSNIYAAIGKWD 447
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 297/506 (58%), Gaps = 11/506 (2%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVKEPNVFLYNAMIRA 86
+LK+I Q++K + L TK + +C S GDL YA +F + PN F++NA+IRA
Sbjct: 3 QLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIRA 62
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
Y+N+ LA Y+QML S + + +T PF++++C LL Q+H V K
Sbjct: 63 YSNSDEPELAFLSYQQML-----SSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKL 117
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
G S NALL +Y C E+ A ++F+ + +RD V+WN +I GY + G +K A +F
Sbjct: 118 GFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVF 177
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
MP +VSWT++ISG G EAL + +MQ G E D ++I S+L ACA LG+L+
Sbjct: 178 LDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALD 237
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV--ERDVVSWSTVIGG 324
G W+H Y N + VI AL+ MY+KCG + +A +F ++ ++DV W+ +I G
Sbjct: 238 QGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDG 297
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
A HG+ +A+ F+ M+R + PN ITF +L AC++ G EG F SMK +++
Sbjct: 298 FAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNP 357
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
IEHYGC+VDLLGR+GRLD+A +I++MPMKP A IWG+LL +C + + + HL
Sbjct: 358 SIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHL 417
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
+ ++ + +G Y+ L+ I A G+W++ + +R ++S + +PG S + +N V EF++G
Sbjct: 418 VEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIVHEFLAG 477
Query: 505 DDTKPFLKDIFWLLELLA--LHQDRA 528
P ++ I L+ +A L QD
Sbjct: 478 HQDHPQMEQIQLKLKQIAERLRQDEG 503
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 194/500 (38%), Positives = 295/500 (59%), Gaps = 25/500 (5%)
Query: 20 ILQSCENLIELKKIHTQILKYLL----SQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
+ ++C L L ++ ++IL ++L F+ +I + S GDL A +F +
Sbjct: 85 LFKACARL-SLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVR 143
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
++ +N+MI Y A+N Y++M + I PD+ T+ V+ SCA L L
Sbjct: 144 DLVSWNSMINGYVRRGWAYEALNFYREMKVEG-----IKPDEVTMIGVVSSCAQLEDLDL 198
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G++ H ++ + GLK NAL+D+Y KC L A K+F+ MT++ +V+W
Sbjct: 199 GRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTT------- 251
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
MLFD+MP +V W AMI GY H EAL +F +MQ + I PDE+++VS
Sbjct: 252 --------MLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSC 303
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L AC+QLG+L++G WIH Y +K+ L + ALI+MY KCG I +A Q+F ++ R+
Sbjct: 304 LSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNS 363
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
++W+ +I GLA HG AH AI F EM V P+++TF+GLLSAC H G EG YF
Sbjct: 364 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 423
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M ++ K++HY C+VDLLGRAG L++A +I+ MP++ DA +WG+L +CR + N+
Sbjct: 424 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 483
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ A LL ++P D+G YVLL+N+Y + W++ + RKL+R + ++KTPGCS IEVN
Sbjct: 484 MGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVN 543
Query: 496 NEVQEFVSGDDTKPFLKDIF 515
V EF+ D + P + I+
Sbjct: 544 GIVYEFIVRDKSHPQSEQIY 563
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 215/422 (50%), Gaps = 55/422 (13%)
Query: 42 LSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINL 99
L + F +++I C + DL Y + + + PN F +N IR + ++ A+ L
Sbjct: 6 LIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVL 65
Query: 100 YKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALL 159
YK++L+ T PD +T P + K+CA L +G +I HV G S NA++
Sbjct: 66 YKRVLQCDGTK----PDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVI 121
Query: 160 DLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA 219
L C +L A K+F++ RD+V+WN++I+GY R G W
Sbjct: 122 HLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRG-------------------WA- 161
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
EAL+ +R+M++ GI+PDE++++ V+ +CAQL L+LG H Y ++N
Sbjct: 162 -----------YEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENG 210
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQMV----------------ERDVVSWSTVIG 323
L + NAL++MY+KCG + A +LFD M ++DVV W+ +IG
Sbjct: 211 LKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIG 270
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
G + + +A+ LF+EMQ + + P+++T + LSAC+ G + G+ +++ H +
Sbjct: 271 GYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELS 329
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+ L+D+ + G++ +A+ + +E+P + ++ W +++S + N A+
Sbjct: 330 LNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGNAHGAIAYFSE 388
Query: 444 LL 445
++
Sbjct: 389 MI 390
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 185/517 (35%), Positives = 305/517 (58%), Gaps = 40/517 (7%)
Query: 14 EDRFVPILQSCENLIELKKIHT-QILKYLLSQSNFLVTKMI-DVCNSGGDLAYASLLFKQ 71
+ R P+ + C +L ++K++H +L+ LS + L + G +A+A L+F Q
Sbjct: 8 QRRQPPLWRRCRSLRQIKQVHALMVLRGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQ 67
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ P++F+YN +IR + A++LY +M R G + PDK T PFV+++C +
Sbjct: 68 IPRPDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGG-VRPDKITFPFVLRACTAMG 126
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL----------------------- 168
G Q+HAHV K G +S + NAL+ ++ C EL
Sbjct: 127 AGGTGAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMIT 186
Query: 169 --------IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
+ A K+F+E +D V+WN +I+ YA+ G+M AR+LF+++P +VSW AM
Sbjct: 187 GCARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAM 246
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
ISG+ GS+ A+++F QMQ +G +PD ++++S+L ACA G +++G +H + +
Sbjct: 247 ISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLH--SSLSEM 304
Query: 281 LRRT----VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
RT ++ NALI+MY KCG + A Q+F M ++DV +W+++IGGLA HG ++I
Sbjct: 305 FLRTGFTVILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLESID 364
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
+F +M + KV P++ITF+ +L AC+H G ++G YF+ M+ + IE ++HYGC+VD+L
Sbjct: 365 VFKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDML 424
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
GRAG L +A I+ M ++P++ IW +LL +CR + +E+A A LL +++G+YV
Sbjct: 425 GRAGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDESGDYV 484
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
LLSNIYA G W + +MRKL+ + K G ++++
Sbjct: 485 LLSNIYASAGEWSESEKMRKLMDDSGVNKQAGRTVVD 521
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 203/550 (36%), Positives = 316/550 (57%), Gaps = 52/550 (9%)
Query: 6 GALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQ--SNFLVTKMIDVCNSGGDLA 63
L + LE V +L+ C L+ L+ H + + L + + F ++K++ C S
Sbjct: 10 ATLPREALEAHVVSLLRGCRGLLALRSAHAHLTRLRLPRLTAAFALSKLLAACASAPAPP 69
Query: 64 YASL------LFKQVKEPNVFLYNAMIRAYTNNHLYGLAIN-LYKQMLR--DPRTGSLIL 114
A+ LF Q+ +P F YN++IRA +Y+ MLR PR
Sbjct: 70 AAAASSYARTLFDQIPDPTAFCYNSLIRALPAAGAAPAPALAVYRLMLRAGSPR------ 123
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P+ FTL F +K+CA + P G+Q+HA + GL++ + + LL+LY KC+
Sbjct: 124 PNTFTLAFALKACAAVPAPGEGRQLHAQALRQGLEASAYVQTGLLNLYAKCE-------- 175
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM-PYTTIVSWTAMISGYTHIGSYAEA 233
Q+ AR +FD M P ++V+W+AMI+GY+ +G EA
Sbjct: 176 -----------------------QVALARTVFDGMAPDKSLVAWSAMINGYSRVGMVTEA 212
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
L +FR+MQ VG+EPDE+++V V+ ACA+ G+L+LG+W+H Y D+ + + ALI+M
Sbjct: 213 LGLFREMQAVGVEPDEVTMVGVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALIDM 272
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
Y KCG I +A +FD MVE+D +WS +I G A HG A+ LF M LKV PN++TF
Sbjct: 273 YAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTF 332
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
IG+LSACAH+G ++G Y+ S+ ++ I+ +E+YGC++DLL R+G LD A + + +MP
Sbjct: 333 IGVLSACAHSGLVDDGRRYW-SIMQNLGIKPSMENYGCMIDLLCRSGLLDDAYSFVIDMP 391
Query: 414 MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSR 473
+ P++ IW +LL +C++ + ++IA A + LL LEP + NYVLLSN+ A + +W+ VS
Sbjct: 392 ISPNSIIWRTLLVACKSSNRIDIAESASKRLLELEPHNPENYVLLSNLCASNSQWDRVSY 451
Query: 474 MRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA--KDV 531
+RK ++ ++ GCS IE+N + EFV DD+ P +K+I +L +A RA K
Sbjct: 452 LRKKMKDSNVTAVAGCSSIEINGYLHEFVVSDDSHPEIKEIRLVLREIADRVRRAGHKPW 511
Query: 532 IDIMYEDIGE 541
+ D+GE
Sbjct: 512 TAAVLHDVGE 521
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 294/508 (57%), Gaps = 39/508 (7%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFK 70
L + F+ +L+ C+++ +LK+I +Q++ L + F +++I C + DL Y + +
Sbjct: 49 LSNPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILF 108
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ PN F +N IR + ++ A+ LYK++L+ T PD +T P + K+CA L
Sbjct: 109 NTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTK----PDNYTYPLLFKACARL 164
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
+G +I HV G S NA++ L C +L A K+F++ RD+V+WN++I
Sbjct: 165 SLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMI 224
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWT-------------------------------A 219
+GY G ++ AR LFD M T+VSWT A
Sbjct: 225 NGYC--GNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNA 282
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
MI GY H EAL +F +MQ + I PDE+++VS L AC+QLG+L++G WIH Y +K+
Sbjct: 283 MIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHE 342
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
L + ALI+MY KCG I +A Q+F ++ R+ ++W+ +I GLA HG AH AI F
Sbjct: 343 LSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFS 402
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
EM V P+++TF+GLLSAC H G EG YF M ++ K++HY C+VDLLGRA
Sbjct: 403 EMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRA 462
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLS 459
G L++A +I+ MP++ DA +WG+L +CR + N+ + A LL ++P D+G YVLL+
Sbjct: 463 GLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLA 522
Query: 460 NIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
N+Y + W++ + RKL+R + ++KTP
Sbjct: 523 NMYGEAEMWKEAGKARKLMRQRGVEKTP 550
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 192/462 (41%), Positives = 280/462 (60%), Gaps = 8/462 (1%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+L YA LF + FLYN +I+AY +H +I LY + D + P T
Sbjct: 24 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDG-----LRPSHHTF 78
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
F+ + A + +H+ + G +S S L+ Y K L A +VF+EM+
Sbjct: 79 NFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK 138
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+ WN +I+GY R G MK A LFD MP + SWT +ISG++ G+Y+EAL +F M
Sbjct: 139 RDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCM 198
Query: 241 QM-VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
+ ++P+ I++VSVLPACA LG LE+G + Y +N +CNA IEMY KCG
Sbjct: 199 EKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGM 258
Query: 300 INQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I+ A +LF+++ +R++ SW+++IG LA HGK +A+ LF +M R P+ +TF+GLL
Sbjct: 259 IDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLL 318
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC H G +G F SM+ H I K+EHYGC++DLLGR G+L +A ++I+ MPMKPDA
Sbjct: 319 ACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDA 378
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
+WG+LL +C + N+EIA IA E L LEP + GN V++SNIYA + +W+ V RMRKL+
Sbjct: 379 VVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLM 438
Query: 479 RSKSMKKTPGCS-LIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
+ ++M K G S +EV +V +F D + P +I+ +LE
Sbjct: 439 KKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLE 480
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 295/508 (58%), Gaps = 48/508 (9%)
Query: 27 LIELKKIHTQILKYLLSQS----NFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
+ ++ +I Q++ + S N + K+I C ++ A+L+F + PN+F +NA
Sbjct: 1 MAQVLQIQAQLITSPIPSSVVDPNLIAVKLIGACADHANVRQAALIFAHLASPNIFAHNA 60
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
++A N + AI + + P + PD+FT V+K+CAGL G++IHA
Sbjct: 61 TLKALAQNSHWFHAIQFFNHQVSSPNAPN---PDEFTFTSVLKACAGLAHVVNGQKIHAM 117
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V K G +S+ N+L+D+Y K +GY L A
Sbjct: 118 VTKQGFESNLFVRNSLIDMYFK--------------------------AGYLLL-----A 146
Query: 203 RMLFDKMPYT--TIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPAC 259
R LFD+M +V W AMI+GY Y++A++VFR MQ G + P+++++VSVLPAC
Sbjct: 147 RHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPAC 206
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A LG+L+LG+WI + + + + NAL +MY KCGCI +A ++F++M ERDV+SWS
Sbjct: 207 AHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWS 266
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I GLA +G A +A F+EM PND+ F+GLL+AC H G +GL F++M ++
Sbjct: 267 IIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKE 326
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
+ + K+EHYGC+VDLL RAG LD+A ++I MPMKP+ IWG+LL CR Y +
Sbjct: 327 YGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQR 386
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
++H+L L+ + +G+YV L+N+Y+ GR +D ++ R +R + KTPGCS IEV+N V
Sbjct: 387 VVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVH 446
Query: 500 EFVSGDDTKP-------FLKDIFWLLEL 520
EF GD + P ++++ W ++L
Sbjct: 447 EFFMGDLSHPESNKIYSMIRELMWKMKL 474
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 42/318 (13%)
Query: 14 EDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F +L++C L + +KIH + K + F+ +ID+ G L A LF
Sbjct: 92 EFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFD 151
Query: 71 Q--VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
+ V++ NV +NAMI Y N Y AI +++ M + ++P+ TL V+ +CA
Sbjct: 152 EMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMM----QQFGGVVPNDVTLVSVLPACA 207
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
L LGK I + + + NAL D+Y KC + EA +VF +M +RD+++W+
Sbjct: 208 HLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSI 267
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+I G A G EA F +M G +P+
Sbjct: 268 IICGLAMYGHAD-------------------------------EAFGCFYEMLDCGEKPN 296
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGCINQASQLF 307
++ + +L AC G ++ G DK + + V ++++ + G +++A +
Sbjct: 297 DVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMI 356
Query: 308 DQM-VERDVVSWSTVIGG 324
M ++ +V+ W ++GG
Sbjct: 357 SSMPMKPNVIIWGALLGG 374
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 188/497 (37%), Positives = 295/497 (59%), Gaps = 25/497 (5%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
LQ C NL LK++H Q+L LS + ++ +++ + YA +F + P +FLY
Sbjct: 12 LQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFAS-TYAFTIFNHIPNPTLFLY 70
Query: 81 NAMIRAYTNNH-LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
N +I + T++ LA +LY +L T + P+ FT P + K+CA G +
Sbjct: 71 NTLISSLTHHSDQIHLAFSLYNHIL----THKTLQPNSFTFPSLFKACASHPWLQHGPPL 126
Query: 140 HAHVCKFGLKSHS-ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
HAHV KF + +N+LL+ Y K +L + +F+++++ D+ WN +++ YA+
Sbjct: 127 HAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSAS 186
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ Y+T M EAL +F MQ+ I+P+E+++V+++ A
Sbjct: 187 ---------HVSYSTSFEDADM---------SLEALHLFCDMQLSQIKPNEVTLVALISA 228
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
C+ LG+L G W H Y +N+L + AL++MY KCGC+N A QLFD++ +RD +
Sbjct: 229 CSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCY 288
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ +IGG A HG ++A+ L+ M+ + P+ T + + AC+H G EGL F+SMK
Sbjct: 289 NAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKG 348
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
H +E K+EHYGCL+DLLGRAGRL +A +++MPMKP+A +W SLL + + + NLE+
Sbjct: 349 VHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGE 408
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
A++HL+ LEPE +GNYVLLSN+YA GRW DV R+R L++ + K PG SL+E+N +
Sbjct: 409 AALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAM 468
Query: 499 QEFVSGDDTKPFLKDIF 515
EF++GD PF K+I+
Sbjct: 469 HEFLTGDKAHPFSKEIY 485
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 305/570 (53%), Gaps = 78/570 (13%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ ++ S + +LK+IH ++L L S FL+TK+I +S GD+ +A +F + P
Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+F +NA+IR Y+ N+ + A+ +Y M + + PD FT P ++K+C+GL +G
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNM-----QLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDEL---------------------------- 168
+ +HA V + G + +N L+ LY KC L
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 169 -----IEAHKVFEEMTDRDIVA-WNNLIS------------------------------- 191
+EA ++F +M D+ W L+S
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 192 -------GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
YA+ GQ+ A++LFDKM ++ W AMISGY G EA+D+F +M
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ PD ISI S + ACAQ+GSLE ++ Y ++ I +ALI+M+ KCG + A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+FD+ ++RDVV WS +I G HG+A +AI L+ M+R V PND+TF+GLL AC H+G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
EG +F+ M DH I + +HY C++DLLGRAG LDQA +I+ MP++P +WG+L
Sbjct: 439 MVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LS+C+ + ++E+ A + L ++P +TG+YV LSN+YA W+ V+ +R ++ K +
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
K GCS +EV ++ F GD + P ++I
Sbjct: 558 KDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/458 (41%), Positives = 277/458 (60%), Gaps = 14/458 (3%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A+LL +V L++A+IRA + + LA+ LY +LR + +LP TLP ++
Sbjct: 25 AALLTSGQLPRSVELHDALIRALSRSARPHLALPLYAHLLR-----AGLLPTPHTLPSLL 79
Query: 125 KSCAGLLCPS------LGKQIHAHVCKFGLKSHSITENALLDLY-GKCDELIEAHKVFEE 177
KS A L P+ L +H H K GL + NAL+ ++ G L + +
Sbjct: 80 KSMA--LSPAVPGAAVLALTVHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRT 137
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
D +N LI+ YAR G++ AR LFD+MP VSW+AM++GY G EAL +F
Sbjct: 138 AAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIF 197
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
+MQ + PD+ +V VL ACAQ G+LE G+W+H Y + + AL++MY KC
Sbjct: 198 ARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKC 257
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G + A +F++M ++V++W+T+I GLA HG+ +A+ LF +M+ + P+DI FIG+L
Sbjct: 258 GEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVL 317
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
AC H G ++G FDSM R + I+ KIEHYGC+VDLL R G L +A +I++MPM+PD
Sbjct: 318 CACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPD 377
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
A IWG+L++ CR + N+E A +H ++LEP+ +G YVLLSNIYA GR +R L
Sbjct: 378 ALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHL 437
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
+R K + KTPGCS +EVN + +F+ GD + P +KDI
Sbjct: 438 MREKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDIL 475
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 3 ARIGALSIKELEDRFVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG 59
AR+ A ++ + V +L +C L + K +H + + + + F T ++D+ +
Sbjct: 198 ARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKC 257
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G++ A +F++++ NV + MI+ + A+ L+ QM S I PD
Sbjct: 258 GEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQM-----ESSGIRPDDIA 312
Query: 120 LPFVIKSC--AGLLCPSLGKQIH-AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
V+ +C AGL+ G+++ + V K+G+K ++DL + L EA ++ +
Sbjct: 313 FIGVLCACTHAGLV--DKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQ 370
Query: 177 EMT-DRDIVAWNNLISG 192
+M + D + W L++G
Sbjct: 371 KMPMEPDALIWGALMAG 387
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 292/486 (60%), Gaps = 6/486 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+ +H +K + F+ +I S GDL A +F +KE +V +N+MI +
Sbjct: 153 QSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 212
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
A+ L+K+M + S + T+ V+ +CA + G+++ +++ + +
Sbjct: 213 GSPDKALELFKKMESEDVKASHV-----TMVGVLSACAKIRDLEFGRRVCSYIEENRVNV 267
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+ NA+LD+Y KC + +A ++F+ M ++D V W ++ GYA + AR + + MP
Sbjct: 268 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMP 327
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV-GIEPDEISIVSVLPACAQLGSLELGE 269
IV+W A+IS Y G EAL VF ++Q+ I+ ++I++VS L ACAQ+G+LELG
Sbjct: 328 KKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGR 387
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
WIH Y KN + + +ALI MY KCG + +A ++F+ + +RDV WS +IGGLA HG
Sbjct: 388 WIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHG 447
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+A+ +F++MQ V PN +TF + AC+HTG +E F M+ + I + +HY
Sbjct: 448 CGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHY 507
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
C+VD+LGR+G L++A+ IE MP+ P +WG+LL +C+ ++NL +A +A LL LEP
Sbjct: 508 ACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEP 567
Query: 450 EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
+ G +VLLSNIYAK G+W++VS +RK +R +KK PGCS IE++ + EF+SGD+ P
Sbjct: 568 RNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 627
Query: 510 FLKDIF 515
+ ++
Sbjct: 628 MSEKVY 633
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 211/442 (47%), Gaps = 70/442 (15%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKM--IDVCNSGGDLAYASLLFKQVKEP 75
+ ++ C +L +LK+ H +++ + + +K+ I +S L YA +F ++ +P
Sbjct: 35 ISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQP 94
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
N F +N +IRAY + +I + M+ + S P+K+T PF+IK+ A + SL
Sbjct: 95 NSFTWNTLIRAYASGPDPVCSIWAFLDMVS---SESQCYPNKYTFPFLIKAAAEVSSLSL 151
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+ +H K + S N+L+ Y C +L A KVF + ++D+V+WN++I+G+ +
Sbjct: 152 GQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 211
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G K AL++F++M+ ++ +++V V
Sbjct: 212 KGSPDK-------------------------------ALELFKKMESEDVKASHVTMVGV 240
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L ACA++ LE G + Y ++N + + NA+++MY KCG I A +LFD M E+D
Sbjct: 241 LSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 300
Query: 316 VSWSTVIGGLA-------------------------------NHGKAHKAIHLFHEMQRL 344
V+W+T++ G A +GK ++A+ +FHE+Q
Sbjct: 301 VTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQ 360
Query: 345 K-VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
K + N IT + LSACA G G + S + + I+ L+ + + G L+
Sbjct: 361 KNIKLNQITLVSTLSACAQVGALELG-RWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLE 419
Query: 404 QALNIIEEMPMKPDAKIWGSLL 425
+A + + K D +W +++
Sbjct: 420 KAREVFNSVE-KRDVFVWSAMI 440
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 152/342 (44%), Gaps = 42/342 (12%)
Query: 132 CPSLG--KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
C SL KQ HAH+ + G+ S D Y A K+F
Sbjct: 41 CSSLRQLKQTHAHMIRTGMFS---------DPYS-------ASKLFA------------- 71
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE--- 246
I+ + ++ AR +FD++P +W +I Y ++ + MV E
Sbjct: 72 IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA--SGPDPVCSIWAFLDMVSSESQC 129
Query: 247 -PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
P++ + ++ A A++ SL LG+ +H K+ + + N+LI Y CG ++ A +
Sbjct: 130 YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACK 189
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+F + E+DVVSW+++I G G KA+ LF +M+ V + +T +G+LSACA
Sbjct: 190 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRD 249
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
G S ++ + + ++D+ + G ++ A + + M K D W ++L
Sbjct: 250 LEFGRRVC-SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK-DNVTWTTML 307
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
Y+ E A E L + +D + L + Y ++G+
Sbjct: 308 DG---YAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGK 346
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/520 (37%), Positives = 298/520 (57%), Gaps = 48/520 (9%)
Query: 17 FVPILQSCENLIELKKIHT-QILKYLLSQSNFL-------VTKMIDVCNSGGDLAYASLL 68
F P L NL LK+IH I+ + NFL T ++ + YA L
Sbjct: 8 FKPTL---PNLKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQL 64
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F Q+ +P+ F+YN MIR + + AI+LY +M R G D +T PFV+K+C
Sbjct: 65 FAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKG-----DSYTFPFVLKACT 119
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL-------------------- 168
L + G +H V + G S+++ N LL + KC +L
Sbjct: 120 RLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSS 179
Query: 169 -----------IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
A K+F EM +RD+V+WN +I+GY + G+M+ ARMLFD+ P +VSW
Sbjct: 180 LIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSW 239
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
AMI+GY G +AL++F +M G+ PDE++++S+L ACA LG LE G+ +H +
Sbjct: 240 NAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVME 299
Query: 278 NHLLR-RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
+ + T++ NALI+MY KCG I ++ +F + ++DV+SW++VI G+A HG +++
Sbjct: 300 ISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLS 359
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF MQR K+ PN+ITF+G+L AC+H G +EG YFD M ++ IE I H GC+VD+L
Sbjct: 360 LFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDML 419
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
GRAG L +A I+ M ++P+A IW +LL++C+ + ++E+A +A E L + + +G+YV
Sbjct: 420 GRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYV 479
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
L+SN+YA G W+ ++RKL+ + K G S +E N
Sbjct: 480 LMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVEACN 519
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 279/451 (61%), Gaps = 9/451 (1%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+P V +++ R N L A + L + P+ T ++ +CA
Sbjct: 55 DPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAG------VEPNHITFITLLSACADFPSE 108
Query: 134 SL--GKQIHAHVCKFGLKS-HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
S +H + CK+GL + H + AL+D+Y KC +L A KVF + ++ V+WN ++
Sbjct: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+G+ R G+++ A LFD+MP +SWTA+I+G G +AL+ F QMQ G+ D +
Sbjct: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYV 228
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
SI++VL ACA LG+L LG W+H + I N+LI+MY +CGCI A Q+F +M
Sbjct: 229 SIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM 288
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+R +VSW+++I G A +G A +++ F MQ+ P+ +++ G L+AC+H G N+GL
Sbjct: 289 AKRTLVSWNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGL 348
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
FD+MK H I +IEHYGC+VDL GRAGRL+ ALN+IEEMPMKP+ + GSLL++CRT
Sbjct: 349 ELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRT 408
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ ++ +A M+HL L+PE YVLLSNIYA G+W+ + +R+ ++++ ++K PG S
Sbjct: 409 HGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYS 468
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+E++ +V EFV+GD+ +I+ +L+LL
Sbjct: 469 SVEIDGKVHEFVAGDNYHADADNIYSMLDLL 499
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 159/387 (41%), Gaps = 70/387 (18%)
Query: 17 FVPILQSC-----ENLIELKKIHTQILKYLLSQSNFLV-TKMIDVCNSGGDLAYASLLFK 70
F+ +L +C E+ +H KY L + +V T +ID+ + L +A +F
Sbjct: 95 FITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFY 154
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDP---------------------- 107
+ N +N M+ + N LAI L+ +M RD
Sbjct: 155 NLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALEC 214
Query: 108 -----RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
R+G + D ++ V+ +CA L +LG +H V K + N+L+D+Y
Sbjct: 215 FHQMQRSG--VAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMY 272
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
+C + A +VF +M R +V+WN++I G+A ++
Sbjct: 273 SRCGCIEFARQVFVKMAKRTLVSWNSIIVGFA--------------------------VN 306
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLL 281
G+ E+L+ F MQ G +PD +S L AC+ G + G E + +
Sbjct: 307 GFAD-----ESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKIT 361
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
R ++++Y + G + A + ++M ++ + V +++ HG + A L
Sbjct: 362 PRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKH 421
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWN 367
+ +L P D ++ L + A G W+
Sbjct: 422 LFKLD-PEGDAYYVLLSNIYAAIGKWD 447
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/502 (37%), Positives = 297/502 (59%), Gaps = 39/502 (7%)
Query: 21 LQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
L+SC + L + I +K L F+++ +I + S D+A A LLF V+E V
Sbjct: 126 LKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGV 185
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++NA+I AY N + + ++K ML G + D+ TL V+ +C + LGK
Sbjct: 186 VMWNAIITAYMKNGNWMEVVEMFKGMLE---VG--VAFDEITLVSVVTACGRIGDAKLGK 240
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+ +V + GL + AL+D+Y KC G
Sbjct: 241 WVAEYVDEKGLVRNRNLMTALIDMYAKC-------------------------------G 269
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
++ KAR LFD M +V+W+AMISGYT EAL +F +MQ+ +EP+++++VSVL
Sbjct: 270 ELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLS 329
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACA LG+LE G+W+H Y + L ++ AL++ Y KCGCI+ A + F+ M ++ +
Sbjct: 330 ACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWT 389
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G+A +G+ +A+ LF M++ + P D+TFIG+L AC+H+ EG +FDSM
Sbjct: 390 WTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMT 449
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+D+ I+ + EHYGC+VDLLGRAG +D+A I MP++P+A IW +LLSSC + N+EI
Sbjct: 450 QDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIG 509
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
A++ ++ L P +G+Y+LLSNIYA G+W++ + +RK ++ + ++KTPGCSLIE++
Sbjct: 510 EEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGV 569
Query: 498 VQEFVSGDDTKPFLKDIFWLLE 519
V EF + D P LK+I+ +E
Sbjct: 570 VVEFFAEDSDHPQLKEIYQKVE 591
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 190/371 (51%), Gaps = 39/371 (10%)
Query: 62 LAYASLLFKQVKEP--NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
L YA LF+ P + YN ++RA + A++L+ +ML + + PD+ T
Sbjct: 66 LPYAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEML----DVASVCPDQHT 121
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ +KSC+ + +G+ I A+ K GL + ++L+ +Y C
Sbjct: 122 VACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASC-------------- 167
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
RD+ A A++LFD + +V W A+I+ Y G++ E +++F+
Sbjct: 168 -RDVAA----------------AQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKG 210
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M VG+ DEI++VSV+ AC ++G +LG+W+ Y D+ L+R + ALI+MY KCG
Sbjct: 211 MLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGE 270
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ +A +LFD M RDVV+WS +I G + +A+ LF EMQ +V PND+T + +LSA
Sbjct: 271 LGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSA 330
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
CA G G + S R + I LVD + G +D A+ E MP+K ++
Sbjct: 331 CAVLGALETG-KWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK-NSW 388
Query: 420 IWGSLLSSCRT 430
W +L+ T
Sbjct: 389 TWTALIKGMAT 399
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 23/243 (9%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V +L +C L L K +H+ I + LS + L T ++D G + A F+ +
Sbjct: 324 MVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMP 383
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA-GLLC 132
N + + A+I+ N A+ L+ M + + I P T V+ +C+ L
Sbjct: 384 VKNSWTWTALIKGMATNGRGREALELFSSMRK-----ASIEPTDVTFIGVLMACSHSCLV 438
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
+ + +G+K + ++DL G+ + EA++ M + + V W L+S
Sbjct: 439 EEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLS 498
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISG--------YTHIGSYAEALDVFRQMQMV 243
A ++ + IVS SG Y +G + A + ++M+
Sbjct: 499 SCAVHKNVEIGEEALKQ-----IVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDR 553
Query: 244 GIE 246
GIE
Sbjct: 554 GIE 556
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/414 (43%), Positives = 260/414 (62%), Gaps = 4/414 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELI 169
+ P+ T ++ LL S LG +H + CK GL ++H + A+L +Y K
Sbjct: 10 VEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGMYSKRGRFR 69
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A VF+ M +++ V WN +I GY R GQ+ A LFD+MP ++SWTAMI+G+ G
Sbjct: 70 KARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMINGFVKKGF 129
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EAL FR+MQ+ G++PD ++I++ L AC LG+L G WIH Y + N+
Sbjct: 130 HEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVRVSNS 189
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI++Y +CGC+ A Q+FD+M +R VVSW++VI G A +G AH+++ F +MQ PN
Sbjct: 190 LIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEEGFKPN 249
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G L+AC H G EGL YF SMKRD+ I +IEHYGCLVDL RAGRL+ AL ++
Sbjct: 250 AVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDALKVV 309
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEI-AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
+ MPMKP+ + GSLL++CRT N + A M+HL L + NYV+LSN+YA G+W
Sbjct: 310 QSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVILSNMYAADGKW 369
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
E S+MR+ ++ +KK PG S IE+++ F++GD+T +I +LELL+
Sbjct: 370 EGASKMRRKMKGLGLKKEPGFSSIEIDDCTHVFMAGDNTHVETTNIREVLELLS 423
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 37/275 (13%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ Y+ +++ MID G + A LF ++ E ++ + AMI + + A
Sbjct: 74 VFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMINGFVKKGFHEEA 133
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + + +C L S G IH +V K++ N
Sbjct: 134 LAWFREM-----QISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVRVSN 188
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
+L+DLY +C + A +VF++M R +V+WN++I G+A
Sbjct: 189 SLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFA---------------------- 226
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
+G+ H E+L FR+MQ G +P+ ++ L AC +G +E G
Sbjct: 227 ----ANGHAH-----ESLVYFRKMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMK 277
Query: 277 KNHLLR-RTVICNALIEMYIKCGCINQASQLFDQM 310
+++ + R L+++Y + G + A ++ M
Sbjct: 278 RDYRISPRIEHYGCLVDLYSRAGRLEDALKVVQSM 312
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/486 (37%), Positives = 294/486 (60%), Gaps = 6/486 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+ +H +K + F+ +I S GDL A +F +KE +V +N+MI +
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
A+ L+K+M + S + T+ V+ +CA + G+Q+ +++ + +
Sbjct: 211 GSPDKALELFKKMESEDVKASHV-----TMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+ NA+LD+Y KC + +A ++F+ M ++D V W ++ GYA + AR + + MP
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV-GIEPDEISIVSVLPACAQLGSLELGE 269
IV+W A+IS Y G EAL VF ++Q+ ++ ++I++VS L ACAQ+G+LELG
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
WIH Y K+ + + +ALI MY KCG + ++ ++F+ + +RDV WS +IGGLA HG
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
++A+ +F++MQ V PN +TF + AC+HTG +E F M+ ++ I + +HY
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
C+VD+LGR+G L++A+ IE MP+ P +WG+LL +C+ ++NL +A +A LL LEP
Sbjct: 506 ACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEP 565
Query: 450 EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
+ G +VLLSNIYAK G+WE+VS +RK +R +KK PGCS IE++ + EF+SGD+ P
Sbjct: 566 RNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 625
Query: 510 FLKDIF 515
+ ++
Sbjct: 626 MSEKVY 631
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 213/445 (47%), Gaps = 71/445 (15%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQV 72
R + +++ C +L +LK+ H +++ + +K+ + +S L YA +F ++
Sbjct: 31 SRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+PN F +N +IRAY + L+I + M+ + S P+K+T PF+IK+ A +
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE----SQCYPNKYTFPFLIKAAAEVSS 146
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
SLG+ +H K + S N+L+ Y C +L A KVF + ++D+V+WN++I+G
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+ + G K AL++F++M+ ++ +++
Sbjct: 207 FVQKGSPDK-------------------------------ALELFKKMESEDVKASHVTM 235
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V VL ACA++ +LE G + Y ++N + + NA+++MY KCG I A +LFD M E
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 313 RDVVSWSTVIGGLA-------------------------------NHGKAHKAIHLFHEM 341
+D V+W+T++ G A +GK ++A+ +FHE+
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 342 QRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
Q K + N IT + LSACA G G + S + H I L+ + + G
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCG 414
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLL 425
L+++ + + K D +W +++
Sbjct: 415 DLEKSREVFNSVE-KRDVFVWSAMI 438
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 137/285 (48%), Gaps = 18/285 (6%)
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH----IGSYAEALDVFRQMQMVGI 245
++ + ++ AR +FD++P +W +I Y + S LD+ + Q
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCY-- 128
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
P++ + ++ A A++ SL LG+ +H K+ + + N+LI Y CG ++ A +
Sbjct: 129 -PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACK 187
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA---H 362
+F + E+DVVSW+++I G G KA+ LF +M+ V + +T +G+LSACA +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
F + Y + ++ + + ++D+ + G ++ A + + M K D W
Sbjct: 248 LEFGRQVCSYIE----ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK-DNVTWT 302
Query: 423 SLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
++L Y+ E A E L + +D + L + Y ++G+
Sbjct: 303 TMLDG---YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 204/503 (40%), Positives = 299/503 (59%), Gaps = 13/503 (2%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG--DLAYASLLFKQVKEPNVFLYN 81
C L L++ HT ILK+ L Q++ +++ I S +Y+ F + +F+YN
Sbjct: 23 CTTLTHLQQTHTFILKHALFQNDINLSRFIHKTASLNYPSYSYSIFTFNHNRPFPIFVYN 82
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
+I A LY L + R R L D ++LP+V+KS L LGKQIH
Sbjct: 83 NIIYA-----LYSSNAKLAVSIFRSVRRLGLSF-DSYSLPYVLKSVVCLNDFGLGKQIHC 136
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
GL + ++L+ +Y C ++ A K+F+E V N +I Y ++G +
Sbjct: 137 VGVVTGLDKNVSVCSSLIQMY-SCYDVCSARKLFDEFGGNGCV-LNAMIVAYVKVGDVSN 194
Query: 202 ARMLFDKM--PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
AR LFD M + SWTAMISGYT + EA+ +FR+MQ+ ++PDEI+I++VL AC
Sbjct: 195 ARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSAC 254
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A LG+L LGEWIH Y +K+ L + + N+LI+MY K G I +A +LF+ M + +++W+
Sbjct: 255 ADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWT 314
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
T+I GLA HG +A+ +F M++ +V PN++TFI +LSAC+H G G YF SM+
Sbjct: 315 TMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRS 374
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+ IE KIEHYGC++DLLGRAG L +A ++ MP + +A IWGSLL++ + E+A
Sbjct: 375 RYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAE 434
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
A+ HL VLEP GNY LLSN YA GRW + +RK+++ ++K PG S IEVNN V
Sbjct: 435 EALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIV 494
Query: 499 QEFVSGDDTKPFLKDIFWLLELL 521
EF++GD + DI+ +L L
Sbjct: 495 YEFIAGDKLSIYFVDIYDVLHSL 517
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/515 (38%), Positives = 300/515 (58%), Gaps = 49/515 (9%)
Query: 30 LKKIHTQILKYLL--SQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
L++IH ++L + + S +F + K+I C + GD+ YA LF Q++ PN+F +N+MIR
Sbjct: 4 LRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIR 63
Query: 86 AYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
+ + + L+++M+R P+ FT+ FV+K+C+ + G+Q+HA+V
Sbjct: 64 GCSQSQTPSKEPVILFRKMVRRGYPN----PNTFTMAFVLKACSIVSALEEGQQVHANVL 119
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
K G S E AL++ Y KC++++ A KVF+E+TDR+
Sbjct: 120 KSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN---------------------- 157
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+V+W+ MISGY IG EAL +FR MQ G+ PDE+++VSV+ ACA G+
Sbjct: 158 ---------LVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGA 208
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
L+ G+W+H Y +K + + AL+ MY KCGCI +A ++FD M +D +WS++I G
Sbjct: 209 LDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVG 268
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA +G A A+ F M+ KV PN +TFIG+LSACAH+G +EG Y+ SM + I
Sbjct: 269 LAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSM-LEFGIVP 327
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+E YGC+VDLL RA ++ A ++E MP+ P+ IW +LL C+ NL+ + + + L
Sbjct: 328 SMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRL 387
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
L LEP + NY+LLSN+YA +WE +S++RK ++ +K PGCS IEV+ V EFV G
Sbjct: 388 LELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMG 447
Query: 505 DDTKP-------FLKDIFWLLELLALHQDRAKDVI 532
D + P L+DI + + HQ DV+
Sbjct: 448 DWSHPEAMEVREILRDISKRVHAVG-HQPGISDVL 481
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 159/355 (44%), Gaps = 45/355 (12%)
Query: 20 ILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L++C L E +++H +LK S F+ T +++ D+ AS +F ++ + N
Sbjct: 98 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRN 157
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ ++ MI Y L A+ L++ M + + ++PD+ T+ VI +CA G
Sbjct: 158 LVAWSTMISGYARIGLVNEALGLFRDMQK-----AGVVPDEVTMVSVISACAASGALDTG 212
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K +HA++ K +++ AL+++Y KC + A +VF+ M +D AW+++I G A
Sbjct: 213 KWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLA-- 270
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
I+G +AL+ F +M+ ++P+ ++ + VL
Sbjct: 271 ------------------------INGLAE-----DALEEFFRMEEAKVKPNHVTFIGVL 301
Query: 257 PACAQLGSLELGE--WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VER 313
ACA G + G W M + ++ + ++++ + + A L + M +
Sbjct: 302 SACAHSGLVSEGRRYWSSML--EFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISP 359
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ V W T++ G K+ + + L+ P N +I L + A W +
Sbjct: 360 NPVIWRTLLVGCKKSKNLDKSEVVAQRLLELE-PHNAENYILLSNLYASMSQWEK 413
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/563 (34%), Positives = 306/563 (54%), Gaps = 68/563 (12%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD-LAYASLLFKQVKE 74
+ + + C+ L LK++H QI+ + S + + LAYA +F ++
Sbjct: 98 QILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQN 157
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P LYN++IRA +++ A+ LY ML+ S + PD T PFVIK+C
Sbjct: 158 PPPSLYNSLIRALSSSKTPLEALPLYHTMLQ-----SGLKPDHMTYPFVIKACNESSVTW 212
Query: 135 LGKQIHAHVCKFGLKSHS-------------------------------ITENALLDLYG 163
G +H HV K G + S ++ NA++D Y
Sbjct: 213 FGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYV 272
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
K E+ A VF+ M RD+++WN +I+GYA +G++ +A+ LFD+MP +VSW +M++G
Sbjct: 273 KHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAG 332
Query: 224 -------------------------------YTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y G EAL +F QM+ VG++P E ++
Sbjct: 333 FVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATV 392
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
VS+L ACA LG+L+ G +H Y + N + +++ AL++MY KCG I+ A+Q+F+ M
Sbjct: 393 VSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES 452
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+DV++W+T+I G+A HG +A LF EM+ V PNDITF+ +LSAC+H G +EG
Sbjct: 453 KDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKL 512
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
D M + IE K+EHYGC++DLL RAG L++A+ +I MPM+P+ G+LL CR +
Sbjct: 513 LDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHG 572
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N E+ + + L+ L+P +G Y+LLSNIYA +W+D ++R L++ + K PG S+I
Sbjct: 573 NFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVI 632
Query: 493 EVNNEVQEFVSGDDTKPFLKDIF 515
E+ V FV+GD + P I+
Sbjct: 633 ELKGMVHRFVAGDWSHPESNKIY 655
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 190/511 (37%), Positives = 290/511 (56%), Gaps = 19/511 (3%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVKEP 75
+ + Q+C E++++H LK + F+ ++++ + + DL YA +F +++
Sbjct: 20 LSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRR 79
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
++ +N +I+ Y N I L+ +++ + LPD FTLP VIK CA L
Sbjct: 80 SLIHWNTIIKCYVENQFSHDGIVLFHELVHE------YLPDNFTLPCVIKGCARLGVVQE 133
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI----- 190
GKQIH K G S + +L+++Y KC E+ A KVF+ M D+D+V WN+LI
Sbjct: 134 GKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLV 193
Query: 191 ------SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+GY + G A LF +MP +V+W MI+GY G + +A+ +F M +G
Sbjct: 194 SWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG 253
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
P ++VSVL A + L L G WIH Y +KN ++ +LIEMY KCGCI A
Sbjct: 254 SRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESAL 313
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+F + ++ V W+ +I GL HG A+ A+ LF EM + + PN I FIG+L+AC H G
Sbjct: 314 TVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAG 373
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
++G YFD M ++ IE +EHYGCLVD+L RAG L++A N IE MP+ P+ IW SL
Sbjct: 374 LVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSL 433
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L R + ++I A + ++ + PE G Y+LLSN+YA G WE VS +R+++ + +
Sbjct: 434 LGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFR 493
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
K PGCS +E + EF+ GD + P K+I+
Sbjct: 494 KDPGCSSVEHKGTLHEFIVGDISHPQTKEIY 524
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 190/493 (38%), Positives = 280/493 (56%), Gaps = 36/493 (7%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
LKK H +I Y L + ++TK + S + AS++F+ + P FL+N MIR +
Sbjct: 736 LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
+ + ++ LY +M+ + PDKF PF +KSCAGL GK IH H+ G
Sbjct: 796 DGRFLSSLELYSKMMEKG-----LKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCS 850
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+ + AL+D+Y KC G ++ AR++FDKM
Sbjct: 851 NDLFVDAALVDMYAKC-------------------------------GDIEAARLVFDKM 879
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
+VSWT+MISGY H G +E L F M+ G+ P+ +SI+SVL AC LG+L GE
Sbjct: 880 AVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGE 939
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
W H Y + ++ A+++MY KCG ++ A LFD+ +D+V WS +I HG
Sbjct: 940 WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHG 999
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
KAI LF +M + V P+ +TF +LSAC+H+G EG MYF M + I K+ +Y
Sbjct: 1000 HGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNY 1059
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
C+VDLLGRAG+L +A+++IE MP++PDA IWGSLL +CR ++NL++A +HL L+P
Sbjct: 1060 ACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDP 1119
Query: 450 EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
G +VLLSNIYA RW +V ++RK++ + K G SL+E +N+V +F GD + P
Sbjct: 1120 VHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHP 1179
Query: 510 FLKDIFWLLELLA 522
+ ++ LE LA
Sbjct: 1180 QWEKLYAKLEELA 1192
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 167/535 (31%), Positives = 275/535 (51%), Gaps = 52/535 (9%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V ++ +C L+ +K +H +++ LV ++++ G A+ LF ++
Sbjct: 209 LVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP 268
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V ++ MI Y NN A+NL+ +M+ P+ T+ +++CA
Sbjct: 269 EKDVISWSTMIACYANNEAANEALNLFHEMIEKR-----FEPNSVTVVSALQACAVSRNL 323
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKC---DELIEAHKVFEEMTDRDIVAWNNLI 190
GK+IH G + AL+D+Y KC DE ++
Sbjct: 324 EEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVD-------------------- 363
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
LF ++P +VSW A++SGY G +++ VFR M GI+PD +
Sbjct: 364 --------------LFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAV 409
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++V +L A ++LG + +H Y ++ + +LIE+Y KCG + A +LF M
Sbjct: 410 AVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM 469
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEG 369
+ RDVV WS++I HG+ +A+ +F +M + V PN++TF+ +LSAC+H G EG
Sbjct: 470 IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEG 529
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
L FD M D+ + EH+G +VDLLGR G+L +A++II MP+ +WG+LL +CR
Sbjct: 530 LKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACR 589
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ N+E+ A ++L L+P G Y+LLSNIYA G+W++V+ +R I+ + +KK G
Sbjct: 590 IHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQ 649
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV----IDIMYEDIG 540
S++EV V F++ D P + I+ LL L K+V +D + D G
Sbjct: 650 SMVEVRGGVHSFLASDRFHPDSQKIYELLR--KLEAQMGKEVYIPDLDFLLHDTG 702
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 203/418 (48%), Gaps = 51/418 (12%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
V + Q+C N + ++H+Q+ K + F TK+ + L A +F + PN
Sbjct: 7 LVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPN 66
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V L+N+ +R+Y + + L+ M+ PD FT+P +K+CAGL LG
Sbjct: 67 VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEA----PDNFTIPIALKACAGLRMLELG 122
Query: 137 KQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
K IH K + S +AL++LY KC ++ EA KVFEE D V W ++++GY +
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVS 254
+ P EAL +F QM M+ + D +++VS
Sbjct: 183 -----------NNDP--------------------EEALALFSQMVMMDCVVLDPVTLVS 211
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
V+ ACAQL +++ G +H + + N+L+ +Y K GC A+ LF +M E+D
Sbjct: 212 VVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKD 271
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V+SWST+I AN+ A++A++LFHEM + PN +T + L ACA + EG
Sbjct: 272 VISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG----- 326
Query: 375 SMKRDHHI------EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
K+ H I E L+D+ + D+A+++ + +P K D W +LLS
Sbjct: 327 --KKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP-KKDVVSWVALLS 381
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 184/485 (37%), Positives = 294/485 (60%), Gaps = 8/485 (1%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H ++K LS F++ +I+ S G A +F + +V +NAMI A+ L
Sbjct: 195 LHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGL 254
Query: 93 YGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
A+ L+++M ++D + P+ T+ V+ +CA + G+ I +++ G H
Sbjct: 255 PDKALLLFQEMEMKDVK------PNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEH 308
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
I NA+LD+Y KC + +A +F +M+++DIV+W ++ G+A+LG +A +FD MP+
Sbjct: 309 LILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPH 368
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMV-GIEPDEISIVSVLPACAQLGSLELGEW 270
+W A+IS Y G AL +F +MQ+ +PDE++++ L A AQLG+++ G W
Sbjct: 369 KWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHW 428
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
IH+Y K+ + + +L++MY KCG +N+A ++F + +DV WS +IG LA +G+
Sbjct: 429 IHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQ 488
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
A+ LF M + PN +TF +L AC H G NEG F+ M+ + I +I+HY
Sbjct: 489 GKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYV 548
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C+VD+ GRAG L++A + IE+MP+ P A +WG+LL +C + N+E+A +A ++LL LEP
Sbjct: 549 CVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPC 608
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
+ G +VLLSNIYAK G WE VS +RKL+R +KK P CS I+VN V EF+ GD++ PF
Sbjct: 609 NHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPF 668
Query: 511 LKDIF 515
+ I+
Sbjct: 669 SQKIY 673
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 222/479 (46%), Gaps = 79/479 (16%)
Query: 20 ILQSCENLIELKKIHTQILKYL-----LSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
+ C N ++LK+IH +L+ + S L I C+ L YA +F Q+ +
Sbjct: 78 FIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSC---LIYAKNVFNQIPQ 134
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
PN++ +N +IR Y ++ + ++ ML P+KFT PF+ K+ + L
Sbjct: 135 PNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSE----FPNKFTFPFLFKAASRLKVLH 190
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
LG +H V K L S N+L++ YG AH+VF M +D+V+WN +I+ +A
Sbjct: 191 LGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFA 250
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
G KA +L F++M+M ++P+ I++VS
Sbjct: 251 LGGLPDKALLL-------------------------------FQEMEMKDVKPNVITMVS 279
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
VL ACA+ LE G WI Y + N ++ NA+++MY+KCGCIN A LF++M E+D
Sbjct: 280 VLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKD 339
Query: 315 VVSWSTVIGG---LANHGKAH----------------------------KAIHLFHEMQR 343
+VSW+T++ G L N+ +AH A+ LFHEMQ
Sbjct: 340 IVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQL 399
Query: 344 LK-VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
K P+++T I L A A G + G +K+ H I L+D+ + G L
Sbjct: 400 SKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKK-HDINLNCHLATSLLDMYAKCGNL 458
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
++A+ + + K D +W +++ + Y + A+ + LE N V +NI
Sbjct: 459 NKAMEVFHAVERK-DVYVWSAMIGALAMYGQGKAALDLFSSM--LEAYIKPNAVTFTNI 514
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 144/316 (45%), Gaps = 11/316 (3%)
Query: 119 TLPFVIKSCAGLLCP-SLGK-QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
TL V C+ L P SLG+ ++ G K + + +L+ +C ++ ++
Sbjct: 34 TLLRVSVKCSALSTPLSLGQIAMNCTEAVKGEKGNEVESTNILEFIDQCTNTMQLKQIHA 93
Query: 177 EM--TDR--DIVAWNNLISGYA--RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
M T R D + L++ YA + A+ +F+++P + W +I GY
Sbjct: 94 HMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDP 153
Query: 231 AEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
++ +F M E P++ + + A ++L L LG +H K L I N+
Sbjct: 154 TQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNS 213
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI Y G + A ++F M +DVVSW+ +I A G KA+ LF EM+ V PN
Sbjct: 214 LINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPN 273
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
IT + +LSACA G ++ + EH I + ++D+ + G ++ A ++
Sbjct: 274 VITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILN-NAMLDMYVKCGCINDAKDLF 332
Query: 410 EEMPMKPDAKIWGSLL 425
+M K D W ++L
Sbjct: 333 NKMSEK-DIVSWTTML 347
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 179/414 (43%), Positives = 271/414 (65%), Gaps = 3/414 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSL--GKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELI 169
+ P+ T ++ +C L G IHA+V K GL + ++ AL+D+Y KC +L
Sbjct: 85 VRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLD 144
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
A +F+EM R+ V+WN +I G R G++ +A +LFD+M +SWT+MI G+ G
Sbjct: 145 LAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGC 204
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ +AL+ FR+MQ+ G+EPD ++I+SVL ACA LG+L LG WI+ + K I N+
Sbjct: 205 FEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNS 264
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI+MY +CGCI A Q+F+QM +R +VSW+++I G A +G A +A+ F+ M++ P+
Sbjct: 265 LIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPD 324
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
++F G L+AC+H+G +EGL +FD MKR I +IEHYGCLVDL RAGRL+ ALN+I
Sbjct: 325 GVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVI 384
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
MPMKP+ + GSLL++CRT+ ++ +A M++L ++P NYVLLSNIYA GRW+
Sbjct: 385 ANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWD 444
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
S++RK +++ + K PG S IE++ + EFV+GD T ++I+ +L+ L L
Sbjct: 445 GASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHLFL 498
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 117/250 (46%), Gaps = 36/250 (14%)
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ--LGSLEL 267
P IVSWT+ I+ + G EA F +MQ+ G+ P+ I+ +++L AC L L
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF 109
Query: 268 GEWIHMYCDKNHLLRRTV-ICNALIEMYIKC--------------------------GC- 299
G IH Y K L V + AL++MY KC GC
Sbjct: 110 GGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCM 169
Query: 300 ----INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
+ +A LFDQM ERD +SW+++IGG G +A+ F EMQ V P+ +T I
Sbjct: 170 RNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIIS 229
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+L+ACA+ G GL + + + I+ L+D+ R G + A + E+MP K
Sbjct: 230 VLAACANLGALGLGL-WINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMP-K 287
Query: 416 PDAKIWGSLL 425
W S++
Sbjct: 288 RSLVSWNSMI 297
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 39/318 (12%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MID C G++ A +LF Q+ E + + +MI + + A+ +++M +
Sbjct: 164 MIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQL-----A 218
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
+ PD T+ V+ +CA L LG I+ V K K + N+L+D+Y +C + A
Sbjct: 219 GVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLA 278
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
+VFE+M R +V+WN++I G+A G +
Sbjct: 279 RQVFEQMPKRSLVSWNSMIVGFALNGHAE------------------------------- 307
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNAL 290
EAL+ F M+ G PD +S L AC+ G ++ G ++ + + R L
Sbjct: 308 EALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCL 367
Query: 291 IEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
+++Y + G + A + M ++ + V +++ HG A L + + P +
Sbjct: 368 VDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVD-PGS 426
Query: 350 DITFIGLLSACAHTGFWN 367
D ++ L + A G W+
Sbjct: 427 DSNYVLLSNIYAAVGRWD 444
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/491 (37%), Positives = 287/491 (58%), Gaps = 13/491 (2%)
Query: 10 IKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASL 67
I L I ++C+++ LK+IH L L + ++ KM+ + GDL YA
Sbjct: 12 ILALASILASIAENCQSMNHLKQIHAHSLLTDLHNHSVILGKMLRFAAVSPSGDLPYAQR 71
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
LF Q+ +PN F YN +IR Y + +NL+ QM ++ + PD+FT F+IK+
Sbjct: 72 LFDQMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNH-----VDPDEFTFNFLIKAR 126
Query: 128 AGLL----CPSL--GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
+ + PS +IH V K+G SH +NAL++LY A +VF E
Sbjct: 127 SRVHKVHNFPSTLECDEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGV 186
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
D+V+W+ L+ + R G+++ AR +FD MP +VSWTAM+SGY+ EAL++F +M
Sbjct: 187 DVVSWSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMS 246
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
GI PDE++IVSV+ AC LG +E G +H Y ++N +CNALI MY KCGC++
Sbjct: 247 DAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVD 306
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+A ++F+ M + +++W+++I ANHG A A LF M + P+ ITF+ LL A
Sbjct: 307 RAWRVFNNMKRKSLITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYT 366
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G +EG F M+RD+ IE IEHYGC+VD+LGRAGRL++A +I MP+ + +W
Sbjct: 367 HKGLVDEGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVW 426
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
G+LL++CR Y ++ + ++ LL L+P++ G Y+LL +IY GR + + +R+ ++
Sbjct: 427 GALLAACRIYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQES 486
Query: 482 SMKKTPGCSLI 492
K PG S +
Sbjct: 487 GAMKNPGYSWV 497
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 208/570 (36%), Positives = 309/570 (54%), Gaps = 83/570 (14%)
Query: 10 IKELEDRFVPILQ-----------SCENLIELKKIHTQILKYLLSQSNFLVTKMID-VCN 57
+ E +D+ +PIL+ C + E +IHTQ++ L Q + + +C+
Sbjct: 44 LPEEDDQPLPILKLSHPILRTLESCCGSTKEFNQIHTQLIVSGLLQQPLAAGRAVKTLCS 103
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN-NHLYGLAINLYKQMLRDPRTGSLILPD 116
+ +A LF+ ++EP+ F+ N ++R Y N N Y Y+QM+R + P+
Sbjct: 104 FPDSVQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVR-----KCVAPN 158
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK--------------------------- 149
+T P ++K C + G++IHA + KFG +
Sbjct: 159 HYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFE 218
Query: 150 ----SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
S +T N+++D Y K E+ A ++FEEM +RD+ +WN++I+GY G M A L
Sbjct: 219 VCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDL 278
Query: 206 FDKMPYTTIVSWTAMISGYTH-------------------------------IGSYAEAL 234
F+KMP+ IVSW MI GY I Y E L
Sbjct: 279 FNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECL 338
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEM 293
+F +M M P+E ++VSVL ACA LG L+ G+WIH Y N ++ V+ AL+ M
Sbjct: 339 RMFDKM-MGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTM 397
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
Y KCG ++ A +FD+M R VVSW+++I G HG+A KA+ +F +M++ PND TF
Sbjct: 398 YAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATF 457
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
I +LSACAH+G EG YFD M+R + IE K+EHYGC+VDLLGRAG + +I +MP
Sbjct: 458 ICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMP 517
Query: 414 MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSR 473
M+ +WG+LLS+CRT+SN E+A I + L+ LEP D G Y+LLSNIYA G+W+DV
Sbjct: 518 MEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEI 577
Query: 474 MRKLIRSKSMKKTPGCSLIEVNN-EVQEFV 502
+RK+++ + + KT G S + + Q FV
Sbjct: 578 VRKMMKERGLTKTTGFSWVHIEEFGTQSFV 607
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 178/459 (38%), Positives = 282/459 (61%), Gaps = 18/459 (3%)
Query: 71 QVKEPNV--FLYNAMIRAYT----NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
+ PN+ F++N +IRA T N + A++LY +M +LPD T PF++
Sbjct: 16 HLSHPNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHA-----VLPDLHTFPFLL 70
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
+S + P G+Q+HA + GL + + +L+++Y C A + F+E+T D+
Sbjct: 71 QS---INTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLP 127
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV- 243
+WN +I A+ G + AR LFD+MP ++SW+ MI GY G Y AL +FR +Q +
Sbjct: 128 SWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLE 187
Query: 244 --GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
+ P+E ++ SVL ACA+LG+L+ G+W+H Y DK + V+ +LI+MY KCG I
Sbjct: 188 GSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIE 247
Query: 302 QASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+A +FD + E+DV++WS +I + HG + + + LF M V PN +TF+ +L AC
Sbjct: 248 RAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCAC 307
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
H G +EG YF M ++ + I+HYGC+VDL RAGR++ A N+++ MPM+PD I
Sbjct: 308 VHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMI 367
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
WG+LL+ R + ++E IA+ LL L+P ++ YVLLSN+YAK GRW +V +R L+
Sbjct: 368 WGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEV 427
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
+ +KK PGCSL+EV+ ++EF +GD++ P L +++ +L+
Sbjct: 428 RGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLD 466
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 167/384 (43%), Gaps = 64/384 (16%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F +LQS +++H QIL L+ F+ T +I++ +S G +A F ++ +P+
Sbjct: 66 FPFLLQSINTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPD 125
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQM---------------------------LRDPRT 109
+ +NA+I A + +A L+ QM R +T
Sbjct: 126 LPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQT 185
Query: 110 --GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
GS + P++FT+ V+ +CA L GK +HA++ K G+K + +L+D+Y KC
Sbjct: 186 LEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGS 245
Query: 168 LIEAHKVFEEM-TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ A +F+ + ++D++AW+ AMI+ ++
Sbjct: 246 IERAKCIFDNLGPEKDVMAWS-------------------------------AMITAFSM 274
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTV 285
G E L++F +M G+ P+ ++ V+VL AC G + G E+ ++ +
Sbjct: 275 HGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQ 334
Query: 286 ICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
++++Y + G I A + M +E DV+ W ++ G HG ++ L
Sbjct: 335 HYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEIAITKLLEL 394
Query: 345 KVPPNDITFIGLLSACAHTGFWNE 368
P N ++ L + A G W E
Sbjct: 395 D-PANSSAYVLLSNVYAKLGRWRE 417
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 182/486 (37%), Positives = 297/486 (61%), Gaps = 8/486 (1%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
+LK+ F+ I + S G+L+ A +F + + ++ +N+MI L
Sbjct: 183 HVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIE 242
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
AI +YK+M + + P++ T+ +I SC+ + +LGK+ H ++ + GL+
Sbjct: 243 AIKIYKEMEAEK-----VRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLT 297
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
NAL+D+Y KC EL+ A +F+ M + +V+W ++ GYAR G + AR + K+P ++V
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
W A+ISG EAL +F +MQ+ IEPD++++V+ L AC+QLG+L++G WIH Y
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
+++ L + AL++MY KCG I +A Q+F+++ +R+ ++W+ VI GLA HG A A+
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDAL 477
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
F +M + + P++ITF+G+LSAC H G EG YF M ++ K++HY C+VDL
Sbjct: 478 SYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDL 537
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGRAG L++A +++ MPM DA + G+L +CR Y N++I LL ++P+D+GNY
Sbjct: 538 LGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNY 597
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
VLL+++Y++ W++ RKL+ K ++KTPGCSL+E+N V EFV D + P +
Sbjct: 598 VLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSE--- 654
Query: 516 WLLELL 521
W+ E L
Sbjct: 655 WIYECL 660
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 72/459 (15%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQ 71
E+ + IL+ C++L++LK+I Q++ L ++ F ++++ C + +L Y + + +
Sbjct: 57 ENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYR 116
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+KE NVF +NA IR Y + LYK+ML G + PD T P ++K C G
Sbjct: 117 IKELNVFSWNAAIRGYVESGDIEGGFMLYKRML----LGGTLKPDNHTYPLLLKGCCGQY 172
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
LG + HV KFG + NA + + C EL A+ VF + RD+V WN++I+
Sbjct: 173 SSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMIT 232
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G + G EA+ ++++M+ + P+EI+
Sbjct: 233 GCVKRGLA-------------------------------IEAIKIYKEMEAEKVRPNEIT 261
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQM 310
++ ++ +C+Q+ L LG+ H Y K H L T+ + NAL++MY+KCG + A LFD M
Sbjct: 262 MIGMISSCSQVQDLNLGKEFHCYI-KEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNM 320
Query: 311 VERDVVSWSTVIGGLANHG-------------------------------KAHKAIHLFH 339
++ +VSW+T++ G A G + +A+ LFH
Sbjct: 321 AQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFH 380
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
EMQ + P+ +T + LSAC+ G + G+ ++R H + + LVD+ +
Sbjct: 381 EMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMYAKC 439
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
G + +AL + EE+P + + W +++ + N + A+
Sbjct: 440 GNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQDAL 477
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 195/501 (38%), Positives = 300/501 (59%), Gaps = 13/501 (2%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMI 84
+N ++ IH +K SQ F+ +++ V + +A LF+ + PNV+LY ++I
Sbjct: 38 KNPKHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLI 97
Query: 85 RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
+ + Y AINL+ QM+R +L D + + ++K+C GK++H V
Sbjct: 98 DGFVSFGSYTDAINLFCQMVRKH-----VLADNYAVTAMLKACVLQRALGSGKEVHGLVL 152
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
K GL L++LYGKC L +A K+F+ M +RD+VA +I G +++A
Sbjct: 153 KSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIE 212
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+F++M V WT +I G G + L+VFR+MQ+ G+EP+E++ V VL ACAQLG+
Sbjct: 213 VFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGA 272
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
LELG WIH Y K + + ALI MY +CG I++A LFD + +DV +++++IGG
Sbjct: 273 LELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGG 332
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA HGK+ +A+ LF EM + +V PN ITF+G+L+AC+H G + G F+SM+ H IE
Sbjct: 333 LALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEP 392
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL----EIAVIA 440
++EHYGC+VD+LGR GRL++A + I M ++ D K+ SLLS+C+ + N+ ++A +
Sbjct: 393 EVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLL 452
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQE 500
EH + D+G++++LSN YA GRW + +R+ + + K PGCS IEVNN + E
Sbjct: 453 SEHYRI----DSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHE 508
Query: 501 FVSGDDTKPFLKDIFWLLELL 521
F SGD P K I+ LE L
Sbjct: 509 FFSGDLRHPERKRIYKKLEEL 529
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 297/509 (58%), Gaps = 8/509 (1%)
Query: 17 FVPILQSCENLIELKKIHTQ--ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
F +LQ C +L +LK+IH + L L S+ L K+++ G A +F ++
Sbjct: 6 FYFLLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQN 65
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P++ + +I Y + A +++ + S + PD F + + +C S
Sbjct: 66 PDIVSWTCLISLYLHTSQPCKAFSIFSHLFH-----SGLRPDSFCVVGAVSACGHRKDLS 120
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+ +H V +F L S I NAL+D+Y + + A VF+ M +D+ +W +L++G+
Sbjct: 121 NGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFI 180
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIV 253
+ ++ AR +FD+MP VSWTAMI+GY L++F++M+ G + P I+IV
Sbjct: 181 KCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIV 240
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+VL CA +G+ +LG +H Y +K +L + NAL++MY K G + A ++F +M +R
Sbjct: 241 AVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKR 300
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV SW+T+I GLA HGK A+ F +M + V PN++T + +LSAC+H G EG F
Sbjct: 301 DVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLF 360
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M + H I+ KI+HYGC+VDLLGRAG L +A +IE MP+KPD+ IW SLLS+C + N
Sbjct: 361 QKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGN 420
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L +A +A + ++ LEP+D G Y+LL NIY RWED + RK +R + +KK PGCS +E
Sbjct: 421 LALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVE 480
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
VN V EF++ D D++ +LE +
Sbjct: 481 VNGVVHEFLAEDAVHCIRADVYTVLEAIT 509
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 175/406 (43%), Positives = 264/406 (65%), Gaps = 2/406 (0%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P++ T F+ +CA GK IH H K G AL+D+Y K L+ A +V
Sbjct: 8 PNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQV 67
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F+EMT RDI WN+LI+GY+R G M+ A LF MP ++VSWT MISGY+ G Y +AL
Sbjct: 68 FDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKAL 127
Query: 235 DVFRQMQM-VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
++F +M+ + P+E++I SV ACA+LG+LE+GE I Y N L++ + N L+EM
Sbjct: 128 EMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEM 187
Query: 294 YIKCGCINQASQLFDQMVER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
Y +CG I+ A +F+++ +R ++ SW++++ GLA HG++++A+ L+ +M + P+D+T
Sbjct: 188 YARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVT 247
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
F+GL+ AC H G +G F SM+ + I K+EHYGC+VDLLGRAG L +A ++++ M
Sbjct: 248 FVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSM 307
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVS 472
PMKPD+ IWG+LL +C +SN+E A IA E L +EP + GNYV+L NIYA RW+ V+
Sbjct: 308 PMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRWDGVA 367
Query: 473 RMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
++RKL++ + K G S+IE E+ +F+ D + P +I+ LL
Sbjct: 368 KLRKLMKGGQITKAAGYSVIEGEGEIHKFIVEDKSHPRHYEIYALL 413
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 35/246 (14%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M + G P+E++ + PACA SL G+ IH + K+ AL++MY K G
Sbjct: 1 MLLKGCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGV 60
Query: 300 INQASQLFDQMVERD-------------------------------VVSWSTVIGGLANH 328
+ A Q+FD+M RD VVSW+T+I G + +
Sbjct: 61 LMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQN 120
Query: 329 GKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
G KA+ +F +M++ K V PN++T + SACA G G +S RD+ + +
Sbjct: 121 GMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVG-ERIESYARDNGLMKNLY 179
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL-- 445
L+++ R G++D A ++ E+ + + W S++ + A+ + +L
Sbjct: 180 VSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGE 239
Query: 446 VLEPED 451
+EP+D
Sbjct: 240 GIEPDD 245
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 127/278 (45%), Gaps = 38/278 (13%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+ A LFK + +V + MI Y+ N +Y A+ ++ +M +D + P++ T
Sbjct: 90 GDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKE----VRPNEVT 145
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ V +CA L +G++I ++ GL + N LL++Y +C ++ A VF E+
Sbjct: 146 IASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEIG 205
Query: 180 D-RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
R++ +WN+++ G A G+ +A L+D
Sbjct: 206 KRRNLCSWNSMMMGLAVHGRSNEALQLYD------------------------------- 234
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN-HLLRRTVICNALIEMYIKC 297
QM GIEPD+++ V ++ AC G + G + + N ++ + ++++ +
Sbjct: 235 QMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRA 294
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKA 334
G + +A L M ++ D V W T++G + H A
Sbjct: 295 GELQEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFA 332
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 203/536 (37%), Positives = 296/536 (55%), Gaps = 68/536 (12%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L+SC L E K+IH +LK F+ T +I++ G++ A L+F Q
Sbjct: 132 FPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSN 191
Query: 74 EPNVFLYNAMIRAYTNNHLYGLA---------------------INLYKQMLR------- 105
+ + A+I Y L+G I Y QM R
Sbjct: 192 FRDAISFTALIAGYA---LWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLL 248
Query: 106 --DPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
D R + + P++ T+ V+ +CA LG + + + GL S+ NAL+D+Y
Sbjct: 249 FEDMRKAN-VPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYS 307
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
KC G ++ AR LFD M ++SW MI G
Sbjct: 308 KC-------------------------------GDLQTARELFDDMLERDVISWNVMIGG 336
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
YTH+ SY EAL +FR+M G+EP EI+ +S+LP+CA LG+++LG+WIH Y +KN
Sbjct: 337 YTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVS 396
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
T + +LI++Y KCG I A Q+FD M + + SW+ +I GLA HG+A KA LF +M
Sbjct: 397 TSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSS 456
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+ PN+ITF+G+LSAC H G + G +F SM +D+ I K +HYGC++DLLGRAG +
Sbjct: 457 DGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFE 516
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A ++++ M +KPD IWGSLL +CR + +E+ + E L LEP++ G YVLLSNIYA
Sbjct: 517 EAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYA 576
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
G+W+DV+R+R + + MKK PGC+ IEV+N V EF+ GD P +DI+ +LE
Sbjct: 577 GAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLE 632
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 235/408 (57%), Gaps = 9/408 (2%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQVKEPNV 77
+L C+++ K+IH I+K L + F ++K+I+ + GD++YA LF ++EPN+
Sbjct: 35 LLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNL 94
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F++N+MIR + + LA+ + +M+ S + P+ +T PF++KSCA L GK
Sbjct: 95 FIWNSMIRGLSMSLSPALALVFFVRMIY-----SGVEPNSYTFPFLLKSCAKLASAHEGK 149
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIHAHV K G S +L+++Y + E+ A VF++ RD +++ LI+GYA G
Sbjct: 150 QIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWG 209
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
M +AR LFD+MP +VSW AMI+GY +G EAL +F M+ + P+E +IVSVL
Sbjct: 210 YMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLS 269
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACAQ +L+LG + + + L + NALI+MY KCG + A +LFD M+ERDV+S
Sbjct: 270 ACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVIS 329
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +IGG + +A+ LF EM V P +ITF+ +L +CAH G + G +
Sbjct: 330 WNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYIN 389
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
++ + L+DL + G + A + + M +K A W +++
Sbjct: 390 KNFNSVSTSLST-SLIDLYAKCGNIVAARQVFDGMKIKSLAS-WNAMI 435
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 164/360 (45%), Gaps = 42/360 (11%)
Query: 14 EDRFVPILQSC--ENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E V +L +C N ++L + + I L + LV +ID+ + GDL A LF
Sbjct: 261 ESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFD 320
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ E +V +N MI YT+ Y A+ L+++ML S + P + T ++ SCA L
Sbjct: 321 DMLERDVISWNVMIGGYTHMCSYKEALALFREML-----ASGVEPTEITFLSILPSCAHL 375
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
LGK IHA++ K + +L+DLY KC ++ A +VF+ M + + +WN +I
Sbjct: 376 GAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMI 435
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
G A GQ KA LF KM GIEP+EI
Sbjct: 436 CGLAMHGQADKAFELFSKMSSD-------------------------------GIEPNEI 464
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVICNALIEMYIKCGCINQASQLFDQ 309
+ V +L AC G ++LG+ +++ + ++ +I++ + G +A L
Sbjct: 465 TFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQN 524
Query: 310 M-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M V+ D W +++G +HG+ + + L+ P N ++ L + A G W++
Sbjct: 525 MEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELE-PDNPGAYVLLSNIYAGAGKWDD 583
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 177/484 (36%), Positives = 276/484 (57%), Gaps = 9/484 (1%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC-NSGGDLAYASLLFKQVKEPNVFLYNA 82
C ++ L+++H ++K L++ ++ + C G D++YA L + PN F++N
Sbjct: 43 CASMAHLRQLHAALVKSGLAKDPIAASRAVAFCAGPGRDVSYAERLVRHHPRPNSFMWNT 102
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+IRA ++ A+ L+ ML GS P++ TLP ++ + A L G +H
Sbjct: 103 VIRALSDGARPEAAVALFVDML-----GSPTPPERRTLPSLLAAYARLGRAGDGAALHGM 157
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
K GL + NA + +Y C EA +F + + D VA N+ I AR G++ +A
Sbjct: 158 ALKLGLAGDAYVRNATIAMYASCARADEALALFGQCPEFDAVACNSAIVALARAGRVDEA 217
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R +FD MP T+ +W+AM+S Y EAL +F MQ G+EP+ +VSVL CA L
Sbjct: 218 RAVFDGMPERTVATWSAMVSAYARAARCGEALALFSAMQADGVEPNANVLVSVLGCCASL 277
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD---VVSWS 319
G+L+ G W+H Y D++ + ++ AL++MY KCG ++ A Q+FD + + SW+
Sbjct: 278 GALDQGAWVHAYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGSAKLSSWN 337
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+++ GLA HG+ +A+ LF E++ + P+++TFI +L+A H G +E F SM +
Sbjct: 338 SMMQGLAVHGQWREAVALFSELRSYGLSPDNVTFIAVLTAYGHAGMPDEAQAAFASMATE 397
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
H +E IEHYGCLVD L RAGRL +A + I MPM PDA +WG+LLS CR + + E+
Sbjct: 398 HSVEPGIEHYGCLVDALARAGRLREAEDAIRSMPMAPDAAVWGALLSGCRLHGDAELGAR 457
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A + +P D+G YVL +++ A+ G + +R +R + K PGCS+IEVN V
Sbjct: 458 AAREAVRCDPRDSGAYVLAASVLARGGNPGRGAGVRGRMREAGVGKVPGCSMIEVNGVVH 517
Query: 500 EFVS 503
EFVS
Sbjct: 518 EFVS 521
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 207/596 (34%), Positives = 312/596 (52%), Gaps = 79/596 (13%)
Query: 2 AARIGALSIKEL-EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
A R GA S + L E + ++L ++++H Q+LK+ L +K+I
Sbjct: 45 APRWGAPSQRRLVEQHLASLPHGLQHLHHVQELHAQLLKHGLHLDPLAASKLISSYALQR 104
Query: 61 DLAYASLLFKQVKEP--NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
L + +F P FL N ++RAY N L A++L+ M + D F
Sbjct: 105 RLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSAMPQR---------DSF 155
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV---- 174
T F+IK+ + L + +H+HV K G + NAL+D Y K ++A KV
Sbjct: 156 TYSFLIKALSSSGLTPL-RAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEM 214
Query: 175 ---------------------------FEEMTDRDIVAWNNLISGYARLGQMKKA----- 202
F+EM D+D V+WN ++ GY + G+M+ A
Sbjct: 215 PRRDTVSWNSAMAAMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQ 274
Query: 203 --------------------------RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
R++FDKMP +V+WT M+S G EA +
Sbjct: 275 CMPERNVVSWSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRL 334
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
F QM+ +E D ++VS+L ACA+ GSL LG+ IH Y L R T +CNA+I+M+ K
Sbjct: 335 FTQMKEAAVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCK 394
Query: 297 CGCINQASQLFD-QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
CGC+N+A +FD ++ E+D VSW+T+IGG A HG KA+ F +M+ P+ +T I
Sbjct: 395 CGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMIN 454
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+LSAC H GF EG +F +M+RD+ I +IEHYGC++DLLGR G +++A+ +I+ MP
Sbjct: 455 VLSACTHMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWD 514
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
P+ IWGSLLS+CR + N+E A IA+ L L+P + GNY +LSNIYA+ G+W D+++ R
Sbjct: 515 PNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKAR 574
Query: 476 KLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
++ +K+ G S IE++ EF GD I +++ L+ H KDV
Sbjct: 575 MQMKGTGSQKSAGSSWIELDEAFHEFTVGDRKHSDSDQISEMVDRLSSH---VKDV 627
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 191/510 (37%), Positives = 298/510 (58%), Gaps = 50/510 (9%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L+SC LIE +++H ++K + F+ T +ID+ ++GG + A +F ++
Sbjct: 202 FPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMF 261
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYK-QMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
E NV + +MI Y L+ +L + L D + P++
Sbjct: 262 ERNVVAWTSMING------YILSADLVSARRLFD------LAPER--------------- 294
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+ N ++ Y + +++EA K+F EM +RD++ WN ++ G
Sbjct: 295 ------------------DVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKG 336
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEIS 251
YA G ++ LF++MP I SW A+I GY H G + E L F++M + P++ +
Sbjct: 337 YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDAT 396
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V+VL ACA+LG+L+LG+W+H+Y + + L + NAL++MY KCG I A +F M
Sbjct: 397 LVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMD 456
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+D++SW+T+IGGLA H + A++LF +M+ P+ ITFIG+L AC H G +G
Sbjct: 457 TKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFA 516
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
YF SM D+ I +IEHYGC+VD+L RAGRL+QA + +MP++ D IW LL +CR Y
Sbjct: 517 YFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIY 576
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+E+A +A++ L+ LEP++ NYV+LSNIY GRWEDV+R++ +R KK PGCSL
Sbjct: 577 KNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSL 636
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
IEVN+ V EF S D+ P +++I+ +L L
Sbjct: 637 IEVNDAVVEFYSLDERHPQIEEIYGVLRGL 666
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 194/413 (46%), Gaps = 47/413 (11%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
++SC+ ++ +I QI+ + ++ K++ +C + + YA LF Q+ +PN+ L+
Sbjct: 108 MRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALW 167
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N+M R Y + Y + L+ QM G I P+ FT P V+KSC + G+Q+H
Sbjct: 168 NSMFRGYAQSESYREVVFLFFQM-----KGMDIRPNCFTFPVVLKSCGKINALIEGEQVH 222
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
+ K G + + L+D+Y + +A+K+F EM +R++VAW ++I+GY +
Sbjct: 223 CFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLV 282
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
AR LFD P +V W M+SGY G EA +F +M P+
Sbjct: 283 SARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEM------PN------------ 324
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
R + N +++ Y G + LF++M ER++ SW+
Sbjct: 325 ---------------------RDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNA 363
Query: 321 VIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+IGG A++G + + F M VPPND T + +LSACA G + G +
Sbjct: 364 LIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLG-KWVHVYAES 422
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
++ + L+D+ + G ++ A+++ M K D W +L+ +S
Sbjct: 423 SGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTK-DLISWNTLIGGLAMHS 474
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 173/414 (41%), Positives = 260/414 (62%), Gaps = 4/414 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELI 169
+ P+ T ++ C S LG +H + CK G ++H + A+L +Y K +
Sbjct: 56 VEPNHITFIALLSGCGDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVK 115
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A VF+ M D++ V WN +I GY R GQ+ A +FDKMP ++SWTAMI+G+ G
Sbjct: 116 KARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGF 175
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EAL FR+MQ+ G++PD ++I++ L AC LG+L G W+H Y + N+
Sbjct: 176 HEEALAWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNS 235
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI++Y +CGC+ A ++FD+M +R VVSW++VI G A +G AH+++ F +MQ P+
Sbjct: 236 LIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPD 295
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G L+AC+H G EGL YF +MKRDH I +IEHYGCLVDL RAGRL++AL ++
Sbjct: 296 AVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVV 355
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEI-AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
+ MPMKP+ + GSLL++CRT+ N + A M+HL + + NYV+LSN+YA G+W
Sbjct: 356 QSMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKW 415
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
E S+MR+ ++ +KK PG S IE+++ F++GD DI +LEL++
Sbjct: 416 EGASQMRRKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETADIREVLELVS 469
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 38/248 (15%)
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL--GSLELGEW 270
TIVSWT+ I+ T G AEA F M++ G+EP+ I+ +++L C GS LG+
Sbjct: 24 TIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEALGDL 83
Query: 271 IHMYC-----DKNHLL---------------------------RRTVICNALIEMYIKCG 298
+H Y D+ H++ + +V N +I+ Y++ G
Sbjct: 84 LHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMRNG 143
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
++ A ++FD+M ERD++SW+ +I G G +A+ F EMQ V P+ + I L+
Sbjct: 144 QVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALN 203
Query: 359 ACAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
AC + G + GL ++ M +D ++ ++ L+DL R G ++ A + ++M K
Sbjct: 204 ACTNLGALSFGLWVHRYVMSQD--FKNNVKVSNSLIDLYCRCGCVEFAREVFDKME-KRT 260
Query: 418 AKIWGSLL 425
W S++
Sbjct: 261 VVSWNSVI 268
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 42/265 (15%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ Y+ +++ MID G + A +F ++ E ++ + AMI + + A
Sbjct: 120 VFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEA 179
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + + +C L S G +H +V K++ N
Sbjct: 180 LAWFREM-----QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSN 234
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI-- 214
+L+DLY +C + A +VF++M R +V+WN++I G+A G ++ + F KM
Sbjct: 235 SLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKP 294
Query: 215 --VSWTAMISGYTHIGSYAEALDVFRQM-------------------------------- 240
V++T ++ +H+G E L F+ M
Sbjct: 295 DAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKV 354
Query: 241 -QMVGIEPDEISIVSVLPACAQLGS 264
Q + ++P+E+ I S+L AC G+
Sbjct: 355 VQSMPMKPNEVVIGSLLAACRTHGN 379
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
Q +Q +VSW++ I L +G+ +A F +M+ V PN ITFI LLS C
Sbjct: 15 QKLNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFS 74
Query: 365 FWNEGL 370
+E L
Sbjct: 75 SGSEAL 80
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 187/509 (36%), Positives = 301/509 (59%), Gaps = 12/509 (2%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKY-LLSQSNFLVT-KMIDVCNSGGDLAYASLLFKQV 72
DR V +L SC ++H +L+ LL ++ V ++ + G L + L ++
Sbjct: 290 DRAVSLLTSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRT 349
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
++P Y + I A+++ A+ L ML +LP TL + +C GL
Sbjct: 350 RDPTAIFYTSAIHAHSSRGHRLPALALLSDML-----AQGLLPTAHTLSASLPACRGL-- 402
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLIS 191
S G+ +H + K L S ALL +Y + + A +F++M D +V+ +++
Sbjct: 403 -SPGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLT 461
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
YA +G + AR LFD +P V W AMI GYT G EAL +FR+M G+EPDE++
Sbjct: 462 CYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVT 521
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQM 310
+V VL A AQLG++E G+W+H Y + ++ +V + ALI+MY KCG + A +F +
Sbjct: 522 VVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGI 581
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
++D+V W+ +I G A HG + KA+ +F + + + P DITFIGLL+AC+H+G EG
Sbjct: 582 GDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGR 641
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+F SM+R++ I+ KIEHYGC+VDLLGRAG + +A +++ M + PDA +W SLL++CR
Sbjct: 642 EFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRL 701
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ N+ + ++L+ ++G Y+LLSNIYA G W +V+R+R ++++ ++K PGCS
Sbjct: 702 HKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCS 761
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
IE++ EV EFV+GD + P +I+ +L+
Sbjct: 762 SIEIDREVYEFVAGDMSHPRTDEIYVMLD 790
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 315/521 (60%), Gaps = 15/521 (2%)
Query: 11 KELEDRFV-PILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SGGDLAYASLL 68
++L ++F+ ++ +L LK++ + ++ LS S+FL K++ C +L+YA +
Sbjct: 20 EQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFI 79
Query: 69 FKQVKEPNVFLYNAMIRAYTNN---HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
F + PN LY A++ AY+++ H A + ++ M+ S+ P+ F P V+K
Sbjct: 80 FDRFSFPNTHLYAAVLTAYSSSLPLHASS-AFSFFRLMVNR----SVPRPNHFIYPLVLK 134
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC-DELIEAHKVFEEMTDRDIV 184
S L +H H+ K G + + + ALL Y + A ++F+EM++R++V
Sbjct: 135 STPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVV 194
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMV 243
+W ++SGYAR G + A LF+ MP + SW A+++ T G + EA+ +FR+M
Sbjct: 195 SWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEP 254
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
I P+E+++V VL ACAQ G+L+L + IH + + L + N+L+++Y KCG + +A
Sbjct: 255 SIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEA 314
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV---PPNDITFIGLLSAC 360
S +F ++ + +W+++I A HG++ +AI +F EM +L + P+ ITFIGLL+AC
Sbjct: 315 SSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
H G ++G YFD M IE +IEHYGCL+DLLGRAGR D+AL ++ M MK D I
Sbjct: 375 THGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAI 434
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
WGSLL++C+ + +L++A +A+++L+ L P + G +++N+Y + G WE+ R RK+I+
Sbjct: 435 WGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKH 494
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
++ K PG S IE++NEV +F S D + P ++I+ +L+ L
Sbjct: 495 QNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/479 (37%), Positives = 290/479 (60%), Gaps = 8/479 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---LAYASLLFKQVKEPN 76
+L C + ++K+I T + + + K+I C + L++A LF ++ +
Sbjct: 16 LLDKCRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHRS 75
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
F++N +IRA+ + AI L+K ML S LP+ +T F+ K+C L LG
Sbjct: 76 TFIWNTVIRAFAEKNEPRKAIMLFKNMLY-----SNFLPNNYTYSFLFKACTDLNNLYLG 130
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
H K G + + +N L+ ++ + A K+F+ ++RD++ W LI+GY R
Sbjct: 131 LACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVRA 190
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
GQ+ R LFDKMP VSW+AMI+GY +G + EAL++F M + G P+ IV +
Sbjct: 191 GQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCAI 250
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA LG+L+ G WIH Y +N + V+ ALI+MY KCGCI A +F ++ RDV
Sbjct: 251 NACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNRDVH 310
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
++ +I GLANHG++ A+ LF M V PN++TF+ +L+AC+ G ++GL F++M
Sbjct: 311 VYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRIFENM 370
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ + E +++HYGCLVDLLGRAG+L++A +++EMPMKPD+ + G+LL++ R Y ++E+
Sbjct: 371 SKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYGDVEL 430
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+E L L + +G +V+LSN+YA +W++V+R+R+ + K ++K PGCSLI+V+
Sbjct: 431 GEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVRKVPGCSLIKVD 489
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 193/543 (35%), Positives = 303/543 (55%), Gaps = 47/543 (8%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLL-----SQSNFLVTKMIDVCNSGGDLAYASLLFK 70
R V ++ +L L+ H ++L +LL S + K+I + L A +
Sbjct: 20 RLVDSCRAPAHLRSLRAAHARLL-FLLRLPSHPASAAVRVKLIQAYAACAALPAARAVLD 78
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ +N ++R T L+ A+ L+ M P+ G PD +T P +KSCA
Sbjct: 79 ASPDRTTVFFNVLLRGLTAASLHRDALLLFASM--RPQ-GHACFPDHYTYPLALKSCAAT 135
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
LG+QIH+ + GL + ++ + +Y +C +A+++FEEM RD+V+WN +I
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195
Query: 191 SGYARLG------------------------------QMKKARM--------LFDKMPYT 212
SG+A G M KAR+ +FD+M +
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFK 255
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
++SW AM++ YT+ + EA+++F +MQ GIEPD +++ +VLP+C ++ +L LG+ IH
Sbjct: 256 GLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIH 315
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ + ++ NAL++MY CGC+ +A +FD M RDVVSW+++I HG
Sbjct: 316 EVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGR 375
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+AI LF +M + P+ I F+ +L+AC+H G + G YF SM + HI K+EHY C+
Sbjct: 376 EAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACM 435
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VDLLGRAG + +A + I MP+KP+ ++WG+LL +CR +SN++I ++A + LL L P+ T
Sbjct: 436 VDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQT 495
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLK 512
G YVLLSNIYA+ GRW DVS +R ++ SK +KK PG S E+ + V F GD + P K
Sbjct: 496 GYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSK 555
Query: 513 DIF 515
I+
Sbjct: 556 MIY 558
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/509 (37%), Positives = 296/509 (58%), Gaps = 8/509 (1%)
Query: 17 FVPILQSCENLIELKKIHTQ--ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
F +LQ C +L +LK+IH + L L S+ L K+++ G A +F ++
Sbjct: 257 FYFLLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQN 316
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P++ + +I Y + A +++ + S + PD F + + +C S
Sbjct: 317 PDIVSWTCLISLYLHTSQPCKAFSIFSHLFH-----SGLRPDSFCVVGAVSACGHRKDLS 371
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+ +H V +F L S I NAL+D+Y + + A VF+ M +D+ +W +L++G+
Sbjct: 372 NGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFI 431
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIV 253
+ ++ AR +FD+MP VSWTAMI+GY L++F++M+ G + P I+IV
Sbjct: 432 KCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIV 491
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+VL CA +G+ +LG +H Y +K +L + NAL++MY K G + A ++F +M +R
Sbjct: 492 AVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKR 551
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV SW+T+I GLA HGK A+ F +M + PN++T + +LSAC+H G EG F
Sbjct: 552 DVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLF 611
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M + H I+ KI+HYGC+VDLLGRAG L +A +IE MP+KPD+ IW SLLS+C + N
Sbjct: 612 QKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGN 671
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L +A +A + ++ LEP+D G Y+LL NIY RWED + RK +R + +KK PGCS +E
Sbjct: 672 LALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVE 731
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
VN V EF++ D D++ +LE +
Sbjct: 732 VNGVVHEFLAEDAVHCIRADVYTVLEAIT 760
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 179/499 (35%), Positives = 298/499 (59%), Gaps = 5/499 (1%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
L S + + E +++H +++ + S F+ ++ + G + +F ++++P + L+
Sbjct: 101 LVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLW 160
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
+IRAY A+ L++ M T PD + V+ +C L + K +H
Sbjct: 161 TLIIRAYVCVTFPEKALELFRTMREVGLT-----PDMVAISTVVSACGLLGDLGVAKAMH 215
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
+ K G++ + + L+ YG+C L A++ F+E ++IV WN +I ++
Sbjct: 216 CFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLE 275
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
+ LF MP +VSW +MI G+ IG Y EAL F +M+ G+ P+ ++++S L ACA
Sbjct: 276 LGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACA 335
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
G+L+ G WIH Y DKN + R + ++LI+MY KCG I++A Q+F++ RD+ +W++
Sbjct: 336 SHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTS 395
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
++ GLA HG+ KA+H F +M+ +V P+D+T +G+LSACAH G ++G YF SM++
Sbjct: 396 IVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVF 455
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
+ K+EHYGC+VDLLGR G L +A ++I MPM+ + IWG+ LS+CR ++N+E+ +A
Sbjct: 456 GLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVA 515
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQE 500
LL L+P D V+LSN+YA+ +W+ +RK I+ K +KK+PGCS IEVN V
Sbjct: 516 ARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHG 575
Query: 501 FVSGDDTKPFLKDIFWLLE 519
F+ GD++ P +I ++E
Sbjct: 576 FLVGDNSHPCYTEINSMVE 594
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 174/401 (43%), Gaps = 81/401 (20%)
Query: 76 NVFLYNAMIRAYTNNHLYGLAINL--YKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
NVF++N MIR N L L Y Q LR + + P+ T +++K+
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLR-----AGLRPNGHTFMYLLKALVSGQEV 107
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+++HA V + G ALL Y C + + +VF+EM +V W
Sbjct: 108 KEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLW------- 160
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
T +I Y + +AL++FR M+ VG+ PD ++I
Sbjct: 161 ------------------------TLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAIS 196
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA---------- 303
+V+ AC LG L + + +H + +K+ + + + LI Y +CG ++ A
Sbjct: 197 TVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMK 256
Query: 304 ---------------------SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
QLF M +RDVVSW+++IGG A G+ +A+ FHEM+
Sbjct: 257 NIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEME 316
Query: 343 RLKVPPNDITFIGLLSACAH-----TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
V PN +T + LSACA TG W + + M RD ++ L+D+
Sbjct: 317 FSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSS------LIDMYS 370
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+ G +D+A+ I EE + D W S++ + E A+
Sbjct: 371 KCGDIDKAVQIFEE-STRRDLFTWTSIVCGLAMHGRGEKAL 410
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 4/232 (1%)
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ--MVGIEPDEISIVSVLPACAQLGSL 265
++ + W MI G + MQ G+ P+ + + +L A +
Sbjct: 48 RLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEV 107
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+ GE +H + + AL+ Y+ CG + + Q+FD+M + +V W+ +I
Sbjct: 108 KEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAY 167
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
KA+ LF M+ + + P+ + ++SAC G +++ IE
Sbjct: 168 VCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKS-GIEVD 226
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
L+ G G LD A +E PMK + +W +++ ++NLE+
Sbjct: 227 AFVSSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELG 277
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 280/468 (59%), Gaps = 38/468 (8%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G++ A +F ++ +V +NAMI Y Y A+ L+K+M++
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK---- 191
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ V+ +CA LG+Q+H+ + G S+ NAL+DLY KC
Sbjct: 192 -TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKC---- 246
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
GQ++ A LF+ + +VSW +I GYTH+
Sbjct: 247 ---------------------------GQVETACGLFEGLSCKDVVSWNTLIGGYTHMNL 279
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN--HLLRRTVIC 287
Y EAL +F++M G P++++IVS+LPACA LG++++G WIH+Y DK + +
Sbjct: 280 YKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR 339
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+LI+MY KCG I A Q+F+ M+ + + SW+ +I G A HG+A+ LF M++ +
Sbjct: 340 TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIE 399
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+DITF+GLLSAC+H+G + G F SM +D+ I K+EHYGC++DLLG +G +A
Sbjct: 400 PDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKE 459
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I+ MPM+PD IW SLL +CR + NLE+A +L+ +EPE+ G+YVLLSNIYA G
Sbjct: 460 MIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGE 519
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
W++V+++R L+ K MKK PGCS IE+++EV EF+ GD P ++I+
Sbjct: 520 WDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIY 567
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 204/355 (57%), Gaps = 12/355 (3%)
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTL 120
YA +F ++EPN ++N M+R Y + A+ LY M+ SL +LP+ +T
Sbjct: 16 FPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMI------SLGLLPNSYTF 69
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PF++KSCA G+QIH HV K G + +L+ +Y + L +AHKVF+ +
Sbjct: 70 PFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSH 129
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+V++ LI+GYA G ++ A+ +FD++P +VSW AMISGY GSY EAL++F++M
Sbjct: 130 RDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEM 189
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ PDE ++V+VL ACAQ S+ELG +H + D + I NALI++Y KCG +
Sbjct: 190 MKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQV 249
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A LF+ + +DVVSW+T+IGG + +A+ LF EM R PND+T + +L AC
Sbjct: 250 ETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPAC 309
Query: 361 AHTGFWNEGL---MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
AH G + G +Y D +D + + L+D+ + G ++ A + M
Sbjct: 310 AHLGAIDIGRWIHVYIDKKLKD--VTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM 362
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 173/370 (46%), Gaps = 50/370 (13%)
Query: 9 SIKELEDRFVPILQSC--ENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
+++ E V +L +C +EL +++H+ I + + +V +ID+ + G + A
Sbjct: 193 NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF+ + +V +N +I YT+ +LY A+ L+++MLR + P+ T+ ++
Sbjct: 253 CGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGES-----PNDVTIVSILP 307
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSIT-----ENALLDLYGKCDELIEAHKVFEEMTD 180
+CA L +G+ IH ++ K K +T +L+D+Y KC ++ AH+VF M
Sbjct: 308 ACAHLGAIDIGRWIHVYIDK---KLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLH 364
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
+ + +WN +I G+A G+ D+F +M
Sbjct: 365 KSLSSWNAMIFGFAMHGRANA-------------------------------GFDLFSRM 393
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH-LLRRTVICNALIEMYIKCGC 299
+ GIEPD+I+ V +L AC+ G L+LG I +++ + + +I++ G
Sbjct: 394 RKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGL 453
Query: 300 INQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+A ++ M +E D V W +++ HG A + +++ P N +++ L +
Sbjct: 454 FKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVE-PENPGSYVLLSN 512
Query: 359 ACAHTGFWNE 368
A G W+E
Sbjct: 513 IYATAGEWDE 522
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 298/505 (59%), Gaps = 8/505 (1%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L +C ++ +L+ +H +I++ + +ID+ G L A +F +
Sbjct: 249 YASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLT 308
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E N + ++I A+ L+ QM P + D+FTL V+ C
Sbjct: 309 EHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVP-----VASDQFTLATVLGVCLSQKDI 363
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S+G+Q+HAH GL S NAL+ +Y KC ++ +A+ FE M RDI++W +I+ +
Sbjct: 364 SIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAF 423
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
++ G ++KAR FDKMP ++SW +M++ Y G + E L V+ QM G++ D I+
Sbjct: 424 SQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFS 483
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+ + ACA L L LG I +K + N+++ MY +CG I +A ++F +V +
Sbjct: 484 TSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMK 543
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
++VSW+ ++ G A +G+ K I +F +M + P+ I+++ +LS C+H+GF +EG YF
Sbjct: 544 NLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYF 603
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM +DH I EH+ C+VDLLGRAG+L+QA N+I +MP KP+A IWG+LL++CR + N
Sbjct: 604 LSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGN 663
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
++A +A+++LL L+ E G+Y LL+NIY++ G+ + V+ +RKL+R K ++K PGCS IE
Sbjct: 664 TKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIE 723
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLL 518
V+N V F D P +KD+ +L
Sbjct: 724 VDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 230/467 (49%), Gaps = 14/467 (2%)
Query: 12 ELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
E+ +F ++ C +L + +K+H Q++ L S FL ++++ ++ G ++ A +
Sbjct: 2 EMSQKFYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRV 61
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLILPDKF---TLPFVI 124
F + PNV+ +N MI + ++ A L+++M RD + + ++ F L I
Sbjct: 62 FGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATI 121
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
K+ L L Q+H KF + E ++LD+Y KC + A KVF + +
Sbjct: 122 KASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLF 181
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
WN++I GY++ G +KKA LF KMP VSW MIS + G AE L+ F +M G
Sbjct: 182 CWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQG 241
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
P+ ++ SVL AC + LE G +H + LI+MY KCG + A
Sbjct: 242 FRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESAR 301
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
Q+FD + E + VSW+++IGG+A G +A+ LF++M+ + V + T +L C
Sbjct: 302 QVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQK 361
Query: 365 FWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
+ G ++ ++ R ++ + LV + + G + +A + E MP++ D W +
Sbjct: 362 DISIGEQLHAHTITRG--LDSSVPVANALVTMYAKCGDVWKANHAFELMPIR-DIISWTA 418
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
++++ ++E A E+ + + ++ + Y + G WE+
Sbjct: 419 MITAFSQAGDVE---KAREYFDKMPERNVISWNSMLATYMQRGYWEE 462
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 298/510 (58%), Gaps = 15/510 (2%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---LAYASLLFKQVKEPN 76
+ Q C L +LK++H IL+ ++ + + + ++ V + D +YA +F+ + N
Sbjct: 11 VAQKCNTLTQLKQLHAHILRCRINDTPYALAPLLSVLATSNDASFFSYARSIFRHLTNRN 70
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS-- 134
F++N MIR Y A++ Y ML++ + + +T P +IK+C LL S
Sbjct: 71 TFMHNTMIRGYLQCRSPLHAVSCYLSMLQNG-----VAVNNYTFPPLIKACIALLPSSPS 125
Query: 135 --LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+G+ +H HV KFGL++ +A ++ Y E+ A +F+E + +D+V ++ G
Sbjct: 126 NIVGRLVHGHVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETSYKDVVLGTAMVDG 185
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y ++G +K AR +FDKMP VSW+AM++ Y+ + + E L +F +MQ G EP+E +
Sbjct: 186 YGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFTEMQNEGTEPNESIL 245
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V+VL ACA LG+L G W+H Y + HL ++ AL++MY KCGC+ A +FD +V+
Sbjct: 246 VTVLTACAHLGALTQGLWVHSYARRFHLESNPILATALVDMYSKCGCVESALSVFDCIVD 305
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+D +W+ +I G A +G A K++ LF +M + PN+ TF+ +L+AC H +GL
Sbjct: 306 KDAGAWNAMISGEALNGDAGKSLQLFRQMAASRTKPNETTFVAVLTACTHAKMVQQGLWL 365
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP---MKPDAKIWGSLLSSCR 429
F+ M + + ++EHY C++DLL RAG +++A +EE DA +WG+LL++CR
Sbjct: 366 FEEMSSVYGVVPRMEHYACVIDLLSRAGMVEEAEKFMEEKMGGLTAGDANVWGALLNACR 425
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ N+ + + L+ + D G +VL NIY + G + +++R I MKK PGC
Sbjct: 426 IHKNIHVGNRVWKKLVDMGVTDCGTHVLTYNIYREAGWDVEANKVRSRIEEVGMKKKPGC 485
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
S+IEV+NEV+EF++GD + P +++ LL+
Sbjct: 486 SIIEVDNEVEEFLAGDHSHPQAQEMCKLLD 515
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 161/367 (43%), Positives = 250/367 (68%)
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
+ S + ++L+ LY C + +A VF+EM RD+VAWN +I+GY + G AR LFD
Sbjct: 109 VASDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFD 168
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
MP +VSWT +I GY + +A++VFR+MQ+ GIE D ++++SVL AC LG+++L
Sbjct: 169 AMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDL 228
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
GEW+H + + L + + N++I+MY+KCGCI +A ++F+ M E+ VV+W+T+I G A
Sbjct: 229 GEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFAL 288
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
HG +A+ +F M+R + PN +TF+ +LSAC+H G + G YF+ M + I+ ++E
Sbjct: 289 HGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVE 348
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
HYGC+VDLLGRAG L +A ++++ MP+K +A IWG+LL++ RT+ + + A+ HL+ L
Sbjct: 349 HYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIEL 408
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
EP ++GNY+LLSNI+A+ RW DVS++RK +R + ++ PG S IEV+ V EF S D +
Sbjct: 409 EPNNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDGMVHEFTSRDWS 468
Query: 508 KPFLKDI 514
PF+ I
Sbjct: 469 HPFIHTI 475
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 38/275 (13%)
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
GD A+A LF + E NV + +I Y A+ ++++M + I D
Sbjct: 157 AGDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEG-----IEADGV 211
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
L V+ +C L LG+ +H V + GL N+++D+Y KC + +A +VFE M
Sbjct: 212 ALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGM 271
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
++ +V W LI+G+A G +A +++F
Sbjct: 272 EEKSVVTWTTLIAGFALHGLGLQA-------------------------------VEMFC 300
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEW-IHMYCDKNHLLRRTVICNALIEMYIKC 297
+M+ + P+ ++ +++L AC+ +G +LG W ++ + + R ++++ +
Sbjct: 301 RMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYGCMVDLLGRA 360
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKA 331
GC+ +A L M ++ + W ++ HG A
Sbjct: 361 GCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDA 395
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 307/570 (53%), Gaps = 78/570 (13%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ ++ S + +L++IH ++L L S FL+TK+I +S GD+ +A +F + P
Sbjct: 24 YASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQ 83
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
VF +NA+IR Y+ N+ + A+ +Y +M + + PD FT P ++K+C GL +G
Sbjct: 84 VFPWNAIIRGYSRNNHFQDALLMYSKM-----QLARVSPDSFTFPHLLKACGGLSHLQMG 138
Query: 137 KQIHAHVCKFGLKSHSITENALLDL---------------------------------YG 163
+ +HA V + G ++ +N L+ L Y
Sbjct: 139 RFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 164 KCDELIEAHKVFEEMTDRDI----VAWNNLISG--------------------------- 192
+ E +EA ++F +M D+ VA ++++
Sbjct: 199 QNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPD 258
Query: 193 --------YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
YA+ GQ+ A++LFDKM ++ W AMISGY G +A+D+F +M
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKD 318
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ PD ISI S + ACAQ+GSLE W+ Y ++ I +ALI+M+ KCG + A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECAR 378
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+FD+ ++RDVV WS +I G HG+A +AI L+ M+R V PND+TF+GLL AC H+G
Sbjct: 379 SVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSG 438
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
EG +F+ M DH I + +HY C++DLLGRAG LDQA +I+ MP++P +WG+L
Sbjct: 439 MVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LS+C+ + ++E+ A + L ++P +TG+YV LSN+YA W+ V+ +R ++ K +
Sbjct: 498 LSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
K GCS +EV ++ F GD + P ++I
Sbjct: 558 KDVGCSWVEVRGRLEGFRVGDKSHPRYEEI 587
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/562 (33%), Positives = 310/562 (55%), Gaps = 76/562 (13%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
L +I+ ++L L FL+ K+++ ++ G+++ A LF + +P+VFL+NA++R Y+
Sbjct: 91 LNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSR 150
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
+ +G AI +Y +M + + PD F+ P V+K+C+ L +G+++H + + G +
Sbjct: 151 HGFFGHAIEMYARM-----QVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFE 205
Query: 150 SHSITENALLDLYGKCDEL-------------------------------IEAHKVFEEM 178
S +N L+ LY KC E+ IEA ++F EM
Sbjct: 206 SDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEM 265
Query: 179 TDRDIVA-WNNLISG--------------------------------------YARLGQM 199
++ W L+S YA+ G +
Sbjct: 266 RKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHV 325
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
AR+ F+++ +++ W AMISGY G EA+++FR M+ I PD I++ S + AC
Sbjct: 326 MVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAAC 385
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
AQ+GSLEL W+ Y + ++ +LI+ Y KCG ++ A +FD++ ++DVV WS
Sbjct: 386 AQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWS 445
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++ G HG+ ++I LFH M++ V PND+TF+GLL+AC ++G EG F M RD
Sbjct: 446 AMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RD 504
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
+ IE + +HY C+VDLLGRAG LD+A N + MP++P +WG+LLS+C+ + ++ +
Sbjct: 505 YGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEY 564
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A E L L+P +TG+YV LSN+YA W+ V+++R L+R K + K G S+IE+N ++Q
Sbjct: 565 AAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQ 624
Query: 500 EFVSGDDTKPFLKDIFWLLELL 521
F +GD T P K+IF +E L
Sbjct: 625 AFQAGDKTHPRSKEIFEEVEDL 646
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 152/353 (43%), Gaps = 56/353 (15%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMI 84
E+L K IH ++K L L+ + + G + A L F QV+ P++ +NAMI
Sbjct: 288 EDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMI 347
Query: 85 RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
Y N AI L++ M I PD T+ I +CA QI +
Sbjct: 348 SGYVKNGYAEEAIELFRLM-----KSKNIRPDSITVTSSIAACA---------QIGS--- 390
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
L+L DE I + D++ +LI YA+ G + AR
Sbjct: 391 --------------LELARWMDEYISMSEF-----RNDVIVNTSLIDTYAKCGSVDMARF 431
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+FD++P +V W+AM+ GY G E++ +F M+ G+ P++++ V +L AC G
Sbjct: 432 VFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGL 491
Query: 265 LELGEWIHMYCDKNHLLR------RTVICNALIEMYIKCGCINQASQLFDQM-VERDVVS 317
+E G W D H +R R ++++ + G +++A M +E V
Sbjct: 492 VEEG-W-----DLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSV 545
Query: 318 WSTVIGGLANHGKAHKAIHLF-HEMQRLKV--PPNDITFIGLLSACAHTGFWN 367
W G L + K H+ + L + +RL P N ++ L + A + W+
Sbjct: 546 W----GALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWD 594
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 177/467 (37%), Positives = 289/467 (61%), Gaps = 5/467 (1%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
+LK+ F+ I + S G+L+ A +F + + ++ +N+MI L
Sbjct: 183 HVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIE 242
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
AI +YK+M + + P++ T+ +I SC+ + +LGK+ H ++ + GL+
Sbjct: 243 AIKIYKEMEAEK-----VRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLT 297
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
NAL+D+Y KC EL+ A +F+ M + +V+W ++ GYAR G + AR + K+P ++V
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
W A+ISG EAL +F +MQ+ IEPD++++V+ L AC+QLG+L++G WIH Y
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
+++ L + AL++MY KCG I +A Q+F+++ +R+ ++W+ VI GLA HG A A+
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDAL 477
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
F +M + + P++ITF+G+LSAC H G EG YF M ++ K++HY C+VDL
Sbjct: 478 SYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDL 537
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGRAG L++A +++ MPM DA + G+L +CR Y N++I LL ++P+D+GNY
Sbjct: 538 LGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNY 597
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
VLL+++Y++ W++ RKL+ K ++KTPGCSL+E+N V EFV
Sbjct: 598 VLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFV 644
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 72/459 (15%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQ 71
E+ + IL+ C++L++LK+I Q++ L ++ F ++++ C + +L Y + + +
Sbjct: 57 ENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYR 116
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+KE NVF +NA IR Y + LYK+ML G + PD T P ++K C G
Sbjct: 117 IKELNVFSWNAAIRGYVESGDIEGGFMLYKRML----LGGTLKPDNHTYPLLLKGCCGQY 172
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
LG + HV KFG + NA + + C EL A+ VF + RD+V WN++I+
Sbjct: 173 SSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMIT 232
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G + G EA+ ++++M+ + P+EI+
Sbjct: 233 GCVKRGLA-------------------------------IEAIKIYKEMEAEKVRPNEIT 261
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQM 310
++ ++ +C+Q+ L LG+ H Y K H L T+ + NAL++MY+KCG + A LFD M
Sbjct: 262 MIGMISSCSQVQDLNLGKEFHCYI-KEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNM 320
Query: 311 VERDVVSWSTVIGGLANHG-------------------------------KAHKAIHLFH 339
++ +VSW+T++ G A G + +A+ LFH
Sbjct: 321 AQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFH 380
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
EMQ + P+ +T + LSAC+ G + G+ ++R H + + LVD+ +
Sbjct: 381 EMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMYAKC 439
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
G + +AL + EE+P + + W +++ + N + A+
Sbjct: 440 GNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQDAL 477
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/489 (38%), Positives = 292/489 (59%), Gaps = 11/489 (2%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
F+ +I V S G+L A LF + ++ +N++I Y L A +LY +M
Sbjct: 191 FVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKM--- 247
Query: 107 PRTGSL-ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
G L ++PD+ T+ V+ + A L +LG+++H + + GL NAL+D+Y KC
Sbjct: 248 ---GELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKC 304
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
+ A +FE MT + +V+W ++ GYA+ G ++ A LF++MP +V W A+I G+
Sbjct: 305 KNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFV 364
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
EAL +F +MQ + PD+I++V+ L AC+QLG+L++G W+H Y DK++L
Sbjct: 365 QAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVA 424
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+ AL++MY KCG I +A Q+F++M R+ ++W+ +I GLA HG+ H AI F EM +
Sbjct: 425 LGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIG 484
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
+ P++ITFIG+LSAC H G ++G YF M + I K++HY CLVDLLGRAG L++A
Sbjct: 485 LVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEA 544
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
+I MP +PDA +WG+L R + N+ + A LL L+P D G YVLL+N+Y
Sbjct: 545 EELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDA 604
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQ 525
WE ++RK++ + ++KTPGCS IE+N V +F+ D + P + I+ L L
Sbjct: 605 NMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLT--- 661
Query: 526 DRAKDVIDI 534
R +VI++
Sbjct: 662 -RQIEVIEV 669
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 216/444 (48%), Gaps = 70/444 (15%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQV 72
+ + +L++C ++ ++K+IH Q++ L F +++++ C + +L Y +
Sbjct: 55 NPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNA 114
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
NVF +N IR Y + A+ LY+ MLR GS I PD +T P + K CAG
Sbjct: 115 ANLNVFSWNMAIRGYVESENPINAVLLYRNMLRK---GSAI-PDNYTYPLLFKVCAGFSL 170
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+I HV + G S NA++ + C EL+ A K+F+E RD+V+WN++I+G
Sbjct: 171 SWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIING 230
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y R G L D EA D++ +M + + PDE+++
Sbjct: 231 YVRCG-------LAD------------------------EAFDLYYKMGELNVMPDEVTM 259
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC--------------- 297
+ V+ A AQL +L LG +H ++ L + NAL++MYIKC
Sbjct: 260 IGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTK 319
Query: 298 ----------------GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
G + A +LF++M E+DVV W+ +IGG ++ +A+ LFHEM
Sbjct: 320 KTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEM 379
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
Q V P+ IT + LSAC+ G + G+ + + H++ + LVD+ + G
Sbjct: 380 QASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAKCGN 438
Query: 402 LDQALNIIEEMPMKPDAKIWGSLL 425
+ +A+ + EEMP + ++ W +++
Sbjct: 439 IKKAIQVFEEMPGR-NSLTWTAII 461
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/508 (38%), Positives = 291/508 (57%), Gaps = 45/508 (8%)
Query: 26 NLIELKKIHT-QILKYLLSQSNFL-------VTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
N+ LK+IH I+ L S FL M+ + + YA +F Q+ +P+
Sbjct: 13 NVGTLKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDT 72
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F++N IR + +H A+ LY QM D R+ + PD FT PFV+K+C L + G
Sbjct: 73 FMWNTYIRGSSQSHDPVHAVALYAQM--DQRS---VKPDNFTFPFVLKACTKLFWVNTGS 127
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+H V + G S+ + N LL + KC +L A +F++ D+VAW+ LI+GYA+ G
Sbjct: 128 AVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRG 187
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTH-------------------------IGSYA- 231
+ AR LFD+MP +VSW MI+ YT IG Y
Sbjct: 188 DLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVL 247
Query: 232 -----EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM-YCDKNHLLRRTV 285
EAL++F +M VG PDE++++S+L ACA LG LE GE +H + N T+
Sbjct: 248 RNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTL 307
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+ NAL++MY KCG I +A ++F + ++DVVSW++VI GLA HG A +++ LF EM+ K
Sbjct: 308 LGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTK 367
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
V P+++TF+G+L+AC+H G +EG YF MK + IE I H GC+VD+LGRAG L +A
Sbjct: 368 VCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEA 427
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
N I M ++P+A +W SLL +C+ + ++E+A A E LL + + +G+YVLLSN+YA
Sbjct: 428 FNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLSNVYASQ 487
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
G W+ +RKL+ + K G S +E
Sbjct: 488 GEWDGAENVRKLMDDNGVTKNRGSSFVE 515
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/489 (38%), Positives = 292/489 (59%), Gaps = 11/489 (2%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
F+ +I V S G+L A LF + ++ +N++I Y L A +LY +M
Sbjct: 191 FVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKM--- 247
Query: 107 PRTGSL-ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
G L ++PD+ T+ V+ + A L +LG+++H + + GL NAL+D+Y KC
Sbjct: 248 ---GELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKC 304
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
+ A +FE MT + +V+W ++ GYA+ G ++ A LF++MP +V W A+I G+
Sbjct: 305 KNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFV 364
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
EAL +F +MQ + PD+I++V+ L AC+QLG+L++G W+H Y DK++L
Sbjct: 365 QAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVA 424
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+ AL++MY KCG I +A Q+F++M R+ ++W+ +I GLA HG+ H AI F EM +
Sbjct: 425 LGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIG 484
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
+ P++ITFIG+LSAC H G ++G YF M + I K++HY CLVDLLGRAG L++A
Sbjct: 485 LVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEA 544
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
+I MP +PDA +WG+L R + N+ + A LL L+P D G YVLL+N+Y
Sbjct: 545 EELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDA 604
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQ 525
WE ++RK++ + ++KTPGCS IE+N V +F+ D + P + I+ L L
Sbjct: 605 NMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLT--- 661
Query: 526 DRAKDVIDI 534
R +VI++
Sbjct: 662 -RQIEVIEV 669
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 215/444 (48%), Gaps = 70/444 (15%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQV 72
+ + +L++C ++ ++K+IH Q++ L F +++++ C + +L Y +
Sbjct: 55 NPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNA 114
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
N F +N IR Y + A+ LY+ MLR GS I PD +T P + K CAG
Sbjct: 115 ANLNXFSWNMAIRGYVESENPINAVLLYRNMLRK---GSAI-PDNYTYPLLFKVCAGFSL 170
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+I HV + G S NA++ + C EL+ A K+F+E RD+V+WN++I+G
Sbjct: 171 SWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIING 230
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y R G L D EA D++ +M + + PDE+++
Sbjct: 231 YVRCG-------LAD------------------------EAFDLYYKMGELNVMPDEVTM 259
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC--------------- 297
+ V+ A AQL +L LG +H ++ L + NAL++MYIKC
Sbjct: 260 IGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTK 319
Query: 298 ----------------GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
G + A +LF++M E+DVV W+ +IGG ++ +A+ LFHEM
Sbjct: 320 KTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEM 379
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
Q V P+ IT + LSAC+ G + G+ + + H++ + LVD+ + G
Sbjct: 380 QASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAKCGN 438
Query: 402 LDQALNIIEEMPMKPDAKIWGSLL 425
+ +A+ + EEMP + ++ W +++
Sbjct: 439 IKKAIQVFEEMPGR-NSLTWTAII 461
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 296/521 (56%), Gaps = 38/521 (7%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFL 79
Q C+NL L +IH +K + ++ + K+I C + L YA L EP+ F+
Sbjct: 180 QYCKNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFM 239
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N ++R Y+ + ++ ++ +M+R I PD F+ FV+K+ A G Q+
Sbjct: 240 FNTLVRGYSESDEPHNSVAVFVEMMRK----GFIFPDSFSFAFVVKAAANFRSLRTGFQM 295
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS-------- 191
H K GL SH L+ +YG+C + A KVF+EM ++VAWN +++
Sbjct: 296 HCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDV 355
Query: 192 -----------------------GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
GY + G+++ A+ +F +MP+ VSW+ MI G++H G
Sbjct: 356 SGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNG 415
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
S+ E+ FR++ + P+E+S+ VL AC+Q G+ E G+ +H + +K+ + N
Sbjct: 416 SFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNN 475
Query: 289 ALIEMYIKCGCINQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
ALI+MY +CG + A +F+ M E R +VSW+++I GLA HG +AI +F+EM V
Sbjct: 476 ALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVM 535
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P++I+FI LL AC+H G EG YF MKR +HIE +EHYGC+VDL GR+G+L +A +
Sbjct: 536 PDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYS 595
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
I +MP+ P A +W +LL +C ++ N+E+A + L L+P ++G+ VLLSN+YA G+
Sbjct: 596 FICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGK 655
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
W+DV+ +RK + + +KK SL+EV + +F + + K
Sbjct: 656 WKDVASIRKSMIVQRIKKITAWSLVEVGKTMYKFTACEKKK 696
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/521 (38%), Positives = 306/521 (58%), Gaps = 25/521 (4%)
Query: 19 PILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG----DLAYASLLFKQVKE 74
P + +C + +L +IH +K + +++ C + DL YA +F Q+ +
Sbjct: 21 PQINTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 80
Query: 75 PNVFLYNAMIRAYTNNHLYG--LAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
N F +N +IR ++ + +AI L+ +M+ D I P++FT P V+K+CA
Sbjct: 81 RNCFSWNTIIRGFSESDEDKALIAITLFCEMMSD----EFIEPNRFTFPSVLKACAKTGK 136
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE---------MTDR-- 181
GKQIH K+G + L+ +Y C + +A +F + M DR
Sbjct: 137 IQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRK 196
Query: 182 ---DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
++V WN +I GY RLG K ARMLFDKM ++VSW MISGY+ G + +A++VFR
Sbjct: 197 RDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFR 256
Query: 239 QMQM-VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
+M+ I P+ +++VSVLPA ++LGSLELGEW+H+Y + + + V+ +ALI+MY KC
Sbjct: 257 EMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 316
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G I +A +F+++ +V++WS +I G A HG+A AI F +M++ V P+D+ +I LL
Sbjct: 317 GIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 376
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
+AC+H G EG YF M +E +IEHYGC+VDLLGR G LD+A I MP+KPD
Sbjct: 377 TACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPD 436
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
IW +LL +CR + N+E+ L+ + P D+G YV LSN+YA G W +VS MR
Sbjct: 437 DVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLR 496
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
++ ++K PGCS I+++ + EF+ DD+ P K+I +L
Sbjct: 497 MKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSML 537
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 191/524 (36%), Positives = 322/524 (61%), Gaps = 14/524 (2%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L SC L L+ ++H+ I+K+ F+ +I + + G+L A LF +
Sbjct: 114 FPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESL 173
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
++ YN MI+ Y + A+ L+ +M S ILPD+FT + C+ L P
Sbjct: 174 VRDLVSYNTMIKGYAEVNQPESALCLFGEM-----QNSGILPDEFTFVALFSVCSVLNEP 228
Query: 134 SLGKQIHAHVCK--FGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLI 190
++GKQIHA V K + S+ + ++A++D+Y KC + A +VF M T + AW++++
Sbjct: 229 NVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMV 288
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
GYAR G++ AR LF+ M ++SWTAMISGY+ G +EAL++F++M+ +GI+PDE+
Sbjct: 289 CGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEV 348
Query: 251 SIVSVLPACAQLGSLELGEWI-HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++V+VL ACA+LG+ +LG+ + H Y + + T++ A+++MY KCG I+ A ++F +
Sbjct: 349 TLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRR 408
Query: 310 MVE--RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
+ + + ++++I GLA HG AI +F E+ + P+++TF+G+L AC H+G
Sbjct: 409 VGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIE 468
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EG F+SM + I+ ++EHYGC+VDLLGR G L++A +++++MP + ++ IW +LLS+
Sbjct: 469 EGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSA 528
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CRT+ N++I IA + LL +E + YVLLSNI A +WE+ ++RK++ ++K P
Sbjct: 529 CRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPP 588
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
G S IE+ + FV+ D + P K+I +L+ +A+ A V
Sbjct: 589 GWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYV 632
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 218/473 (46%), Gaps = 75/473 (15%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID---VCNSGGDLAYASLLFKQVKEPN 76
+L+SC++ + +IH Q + L F ++++I + S L ++ LLF Q+ PN
Sbjct: 15 LLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPN 74
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+F++N MIR Y+ + AI LY M+ + P+ FT PF++ SCA L G
Sbjct: 75 LFMWNTMIRGYSRSDNPREAIVLYMSMI----AKGIAPPNNFTFPFLLNSCARLSSLEPG 130
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
++H+H+ K G +S NAL+ LY L A +F+E RD+V++N +I GYA +
Sbjct: 131 HEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEV 190
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
Q + AL +F +MQ GI PDE + V++
Sbjct: 191 NQPES-------------------------------ALCLFGEMQNSGILPDEFTFVALF 219
Query: 257 PACAQLGSLELGEWIHMYCDKN--HLLRRTVICNALIEMYIKCGC--------------- 299
C+ L +G+ IH KN + ++ +A+++MY KCG
Sbjct: 220 SVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSK 279
Query: 300 -----------------INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
IN A +LF+ M ERDV+SW+ +I G + G+ +A+ LF EM+
Sbjct: 280 SAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEME 339
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
L + P+++T + +LSACA G ++ G + + ++D+ + G +
Sbjct: 340 ALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSI 399
Query: 403 DQALNIIEEMPMK-PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPEDT 452
D AL I + ++ S+++ + E A+ L+ L+P++
Sbjct: 400 DSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEV 452
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 146/307 (47%), Gaps = 8/307 (2%)
Query: 183 IVAWNNLISGYARLGQ---MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
I + + LIS ++ LG + +R+LF ++ + W MI GY+ + EA+ ++
Sbjct: 41 IFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMS 100
Query: 240 MQMVGIEP-DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
M GI P + + +L +CA+L SLE G +H + K+ + NALI +Y G
Sbjct: 101 MIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFG 160
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+N A LFD+ + RD+VS++T+I G A + A+ LF EMQ + P++ TF+ L S
Sbjct: 161 NLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFS 220
Query: 359 ACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
C+ N G ++ K I+ I +VD+ + G ++ A + M
Sbjct: 221 VCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKS 280
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
A W S++ + +A H + D ++ + + Y++ G+ + + K
Sbjct: 281 AAAWSSMVCGYARCGEINVARKLFNH---MHERDVISWTAMISGYSQAGQCSEALELFKE 337
Query: 478 IRSKSMK 484
+ + +K
Sbjct: 338 MEALGIK 344
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 309/516 (59%), Gaps = 16/516 (3%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SGGDLAYASLLFKQ 71
L + + L +L LK++ + + ++F K+I C + +L YA L+F
Sbjct: 5 LNEHVLDTLSKSNHLNHLKQLQAYLTTLGHAHTHFYAFKLIRFCTLTLSNLTYARLIFDH 64
Query: 72 VKEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRD--PRTGSLILPDKFTLPFVIKSCA 128
+ N L+ AMI AY + + A++L++ MLR PR P+ F P +K+C
Sbjct: 65 IPSLNTHLFTAMITAYAAHPATHPSALSLFRHMLRSQPPR------PNHFIFPHALKTCP 118
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE-LIEAHKVFEEMTDRDIVAWN 187
+ +HA + K G + + + AL+D Y K L A KVF+EM+DR +V++
Sbjct: 119 E---SCAAESLHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFT 175
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
++SG+AR+G ++ A +F +M + SW A+I+G T G++ + +++FR+M P
Sbjct: 176 AMVSGFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRP 235
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+ +++V L AC +G L+LG WIH Y KN L + + NAL++MY KCG + +A ++F
Sbjct: 236 NGVTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVF 295
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK--VPPNDITFIGLLSACAHTGF 365
+ E+ + SW+++I A HG++ AI +F +M V P+++TF+GLL+AC H G
Sbjct: 296 EMNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGL 355
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+G YF+ M +++ IE +IEHYGCL+DLLGRAGR D+A+++++ M M+PD +WGSLL
Sbjct: 356 VEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLL 415
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+ C+ + ++A A + L+ ++P + G ++L+N+Y + G+W++V + + ++ + K
Sbjct: 416 NGCKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYK 475
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
PGCS IEV+++V +F S D + P +D++ +LE L
Sbjct: 476 VPGCSWIEVDDQVHQFYSLDKSNPKTEDLYIVLESL 511
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 178/477 (37%), Positives = 281/477 (58%), Gaps = 11/477 (2%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFL 79
++C + LK IH + + L ++ K+ + G L YA LF Q+ +PN F
Sbjct: 249 EACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFF 308
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC--PSL-- 135
YN +IR Y+ + ++ L+ QM R+ + PD FT F++K + + P +
Sbjct: 309 YNTLIRGYSKSSSPSQSVQLFNQMRRN-----CVDPDGFTFTFLLKGRSRMRIDLPLIVA 363
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
+IH V K G H NAL+ LY AH+VF EM D+V+W+ L+ + R
Sbjct: 364 SDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVR 423
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G+++ AR +FD+MP +VSWT M+SGY EAL++FR+M+ VG+ PDE+++V V
Sbjct: 424 AGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIV 483
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ AC LG LE G +H Y D+N +CNALI+MY KCGC++ A Q+F+ M + +
Sbjct: 484 ISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSL 543
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
++W+++I ANHG A A +F M + P+ +TF+ LL+A H G+ ++G F+S
Sbjct: 544 ITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKGWVDDGYGLFES 603
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+RD+ +E +EHYGC+VD+LGRAGRL++A +I M M + +WG+LL++CR Y ++E
Sbjct: 604 MQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVE 663
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
+ ++ L+ L+P++ G Y+LL +IY GR + +R+ + KKT GCS +
Sbjct: 664 MGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 720
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 213/513 (41%), Gaps = 76/513 (14%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFL 79
++C + LK IH + + L ++ K+ + G L YA LF Q+ +PN F
Sbjct: 95 EACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFF 154
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC------- 132
YN +IR Y+ + ++ L+ QM R+ + PD FT F++K + +
Sbjct: 155 YNTLIRGYSKSSSPSQSVQLFNQMRRN-----CVDPDGFTFTFLLKGRSRMRIDLPLIVA 209
Query: 133 --------------PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+L I V S S+ A L + +LI A +
Sbjct: 210 SDEIHGAGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKLIHARAFRANL 269
Query: 179 TDRDIV-AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
+ +V A + + G + A LF ++ + +I GY+ S ++++ +F
Sbjct: 270 HNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLF 329
Query: 238 RQMQMVGIEPDEISIVSVLPACAQL---------------GSLELG---------EWIHM 273
QM+ ++PD + +L +++ L+LG IH+
Sbjct: 330 NQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHL 389
Query: 274 YCDK----------NHLLRRTVIC-NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
Y + N ++ V+ + L+ +++ G + A Q+FD+M ERDVVSW+ ++
Sbjct: 390 YAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMV 449
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MYFDSMKRD 379
G A ++ +A+ LF EM+ + V P+++ + ++SAC G G Y D +
Sbjct: 450 SGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYID----E 505
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
+ + L+D+ + G +D A + M K W S++S+C + N E A
Sbjct: 506 NGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERK-SLITWNSMISACANHGNAEDAFR 564
Query: 440 AMEHLLV--LEPEDTGNYVLLSNIYAKHGRWED 470
+L + P+ LL+ H W D
Sbjct: 565 VFTLMLXSGIRPDGVTFLALLTAY--THKGWVD 595
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 115/274 (41%), Gaps = 33/274 (12%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE--LIE 170
+LP +L + ++C + L IHA + L +H++ + L
Sbjct: 83 MLPTSQSLASMAEACLAMQALKL---IHARAFRANLHNHALVLAKIFRFAAVSPNGCLHY 139
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTH 226
A ++F ++ + +N LI GY++ ++ LF++M + ++T ++ G +
Sbjct: 140 ADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSR 199
Query: 227 IGSYAEALDVFRQMQMVGIE-------------------PDEISIVSVLPACAQLGSLEL 267
+ + ++ G++ P S+ S+ AC + +L+L
Sbjct: 200 MRIDLPLIVASDEIHGAGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKL 259
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKC--GCINQASQLFDQMVERDVVSWSTVIGGL 325
IH + +L ++ + GC++ A +LF Q+ + + ++T+I G
Sbjct: 260 ---IHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGY 316
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ +++ LF++M+R V P+ TF LL
Sbjct: 317 SKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKG 350
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 272/451 (60%), Gaps = 38/451 (8%)
Query: 76 NVFLYNAMIRAYTNNHLYGL---AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL- 131
+ FL N +IRA+ + ++ L A + MLR ++P+KFT PF++K+CA L
Sbjct: 87 DAFLANTLIRAHATSPIHSLRLRAAAFFPLMLR-----GAVVPNKFTFPFLLKACAALPG 141
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
P +G Q HA KFG + N L+ +Y +
Sbjct: 142 SPDVGLQAHAAALKFGFATDQYVSNTLIHMY-------------------------SCFG 176
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G G + AR +FD+MP + V+W+AMI GY G ++A+D+FR+MQ G++ DE++
Sbjct: 177 G----GFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVT 232
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
++ VL A LG+LEL W+ + ++ + + +CNALI+ KCG ++ A +F+ M
Sbjct: 233 VIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQ 292
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+R VVSW++VI LA G+ +A+ +F EM+ VPP+D+ FIG+L+AC+H G +EG
Sbjct: 293 QRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCG 352
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
YFD+MK ++ IE KIEHYGC+VD+ GRAG +++A+ + MP++P+ IW SL+S+CR +
Sbjct: 353 YFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAH 412
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
LE+ LL P NY++LSN++A RW++ S +R+ + + +KK PGCS+
Sbjct: 413 GRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSI 472
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+E++ EV EF++GD++ P KDI+ ++E +A
Sbjct: 473 VELDGEVHEFIAGDESHPQYKDIYRMVEEMA 503
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 149/344 (43%), Gaps = 47/344 (13%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDV--CNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+ H LK+ + ++ +I + C GG L A +F ++ + + ++AMI Y
Sbjct: 148 QAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGYVR 207
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
L A++L+++M + + D+ T+ V+ + L L + + V + G+
Sbjct: 208 GGLSSDAVDLFREM-----QANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIG 262
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
NAL+D KC ++ A VFE M R +V+W ++I A G+ K+
Sbjct: 263 KSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKE-------- 314
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG- 268
A+ VF +M++ G+ PD+++ + VL AC+ G ++ G
Sbjct: 315 -----------------------AVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGC 351
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLAN 327
+ + + + +++M+ + G + +A + M ++ + V W +++
Sbjct: 352 GYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRA 411
Query: 328 HGKAHKAIHLFHEMQRL---KVPPNDITFIGLLSACAHTGFWNE 368
HG+ + L + R + P ++ +I L + A T W E
Sbjct: 412 HGR----LELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKE 451
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/573 (34%), Positives = 309/573 (53%), Gaps = 75/573 (13%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
++Q L LK IH +L+ L + +L+ K++ + G+ Y+ + Q KEPN+FL
Sbjct: 16 LIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFL 75
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N MIR N + +I +Y M ++ + PD FT PFV+K+CA +L LG ++
Sbjct: 76 FNTMIRGLVLNDCFQESIEIYHSMRKEGLS-----PDSFTFPFVLKACARVLDSELGVKM 130
Query: 140 HAHVCKFGLKSHSITENALLDLY----------------------------------GKC 165
H+ V K G ++ + + +L++LY GKC
Sbjct: 131 HSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKC 190
Query: 166 DELIEAHKVFEEM------------------------------------TDRDIVAWNNL 189
E I+ + EM R++ L
Sbjct: 191 REAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATAL 250
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+ Y + G M++AR +FD M IVSW++MI GY G EALD+F +M G++PD
Sbjct: 251 VDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDC 310
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++V VL +CA+LG+LELG+W + N L +V+ ALI+MY KCG +++A ++F
Sbjct: 311 YAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRG 370
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M ++D V W+ I GLA G A+ LF +M++ + P+ TF+GLL AC H G EG
Sbjct: 371 MRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEG 430
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF+SM+ + +IEHYGC+VDLLGRAG LD+A +I+ MPM+ +A +WG+LL CR
Sbjct: 431 RRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCR 490
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ + ++ + ++ L+ LEP +GNYVLLSNIYA +WE+ +++R ++ + +KK PG
Sbjct: 491 LHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGY 550
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
S IEV+ V +F+ GD + P + I+ L LA
Sbjct: 551 SWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELA 583
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 192/487 (39%), Positives = 288/487 (59%), Gaps = 39/487 (8%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S GD+ A +F + E +V +NAMI Y N Y A+ L+K+M+R
Sbjct: 153 TALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR---- 208
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF-GLKSHSITENALLDLYGKCDEL 168
+ + PD+ TL V+ +CA LG++IH V G S NA + LY KC
Sbjct: 209 -TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKC--- 264
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
G ++ A LF+ + +VSW +I GYTH+
Sbjct: 265 ----------------------------GDVEIASGLFEGLSCKDVVSWNTLIGGYTHMN 296
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVI 286
Y EAL +F++M G P++++++SVLPACA LG++++G WIH+Y DK + + +
Sbjct: 297 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSAL 356
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
+LI+MY KCG I A Q+F+ M+ + + SW+ +I G A HG+A+ A LF M++ +
Sbjct: 357 RTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGI 416
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
P+DIT +GLLSAC+H+G + G F S+ +D++I K+EHYGC++DLLG AG +A
Sbjct: 417 EPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAE 476
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
II MPM+PD IW SLL +C+ + NLE+A + L+ +EPE++G+YVLLSNIYA G
Sbjct: 477 EIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAG 536
Query: 467 RWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQD 526
RWEDV+R+R+++ K MKK PGCS IE+++ V EF+ GD P ++I+ +LE + + +
Sbjct: 537 RWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLE 596
Query: 527 RAKDVID 533
A V D
Sbjct: 597 EAGFVPD 603
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 221/399 (55%), Gaps = 15/399 (3%)
Query: 34 HTQILKYLLSQSNFLVTKMIDVCNSG---GDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
H Q++K L +N+ ++K++++C L YA +F+ +EPN+ ++N M+R ++
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ +Y +M+ +P+ +T PF++KSCA G+QIHA V K G +
Sbjct: 62 SDLVSPLEMYVRMVSXGH-----VPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCEL 116
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+L+ +Y + L +A KVF+ + RD+V+ LI+GYA G ++ AR +FD +
Sbjct: 117 DRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXIT 176
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+VSW AMI+GY Y EAL++F++M + PDE ++VSVL ACAQ GS+ELG
Sbjct: 177 ERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGRE 236
Query: 271 IHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
IH D +H ++ I NA I +Y KCG + AS LF+ + +DVVSW+T+IGG +
Sbjct: 237 IHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMN 296
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MYFDSMKRDHHIEHKI 386
+A+ LF EM R PND+T + +L ACAH G + G +Y D KR + +
Sbjct: 297 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYID--KRLKGVTNGS 354
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
L+D+ + G ++ A + M M W +++
Sbjct: 355 ALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMI 392
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 176/368 (47%), Gaps = 45/368 (12%)
Query: 9 SIKELEDRFVPILQSC--ENLIEL-KKIHTQILKYLLSQSNF-LVTKMIDVCNSGGDLAY 64
+++ E V +L +C IEL ++IHT + + S+ +V I + + GD+
Sbjct: 210 NVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEI 269
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
AS LF+ + +V +N +I YT+ +LY A+ L+++MLR + P+ T+ V+
Sbjct: 270 ASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGES-----PNDVTMLSVL 324
Query: 125 KSCAGLLCPSLGKQIHAHVCKF--GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
+CA L +G+ IH ++ K G+ + S +L+D+Y KC ++ AH+VF M +
Sbjct: 325 PACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKS 384
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+ +WN +I G+A G+ A D+F +M+
Sbjct: 385 LSSWNAMIFGFAMHGRANA-------------------------------AFDLFSRMRK 413
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH-LLRRTVICNALIEMYIKCGCIN 301
GIEPD+I++V +L AC+ G L+LG I +++ + + +I++ G
Sbjct: 414 NGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFK 473
Query: 302 QASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+A ++ M +E D V W +++ HG A ++ ++ P N +++ L +
Sbjct: 474 EAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIE-PENSGSYVLLSNIY 532
Query: 361 AHTGFWNE 368
A G W +
Sbjct: 533 ATAGRWED 540
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 204/584 (34%), Positives = 318/584 (54%), Gaps = 82/584 (14%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+ L D+ + +L+ C + L++IHTQ++ + + NFL+ + ID+ D ASLLF
Sbjct: 28 QTLTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDL----KDFNNASLLFS 83
Query: 71 QVKEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
Q+ PN + +N MIR T + L I Y QM +D I P+ FT PFV +CA
Sbjct: 84 QIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQM-KDFG----IRPNNFTYPFVFIACAN 138
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
LL + G+ H+ V K GL + ++L+ +Y +C EL A +VF+E++++D+V+WN++
Sbjct: 139 LLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSM 198
Query: 190 ISGYARLGQMKKARMLF----------DKMPYTTIV------------SW---------- 217
ISGY+R+G A LF D+M +I+ SW
Sbjct: 199 ISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEM 258
Query: 218 -------TAMISGYTHIGSYAEALDVFRQ------------------------------- 239
+A+I Y G + A VF +
Sbjct: 259 DLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSG 318
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ G+ PD+I++V VL ACA +G+L+ G+W+ Y + L + ALI+MY KCG
Sbjct: 319 MRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGS 378
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL--KVPPNDITFIGLL 357
++ A ++F+ M +++ VSW+ +I LA HG+ +++ LF M + V PNDI+FIG+L
Sbjct: 379 LDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVL 438
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
SAC H G +EG FD M + KIEH+ C+VDLL RAG + +A + IE+MP KPD
Sbjct: 439 SACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPD 498
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
+ G+LL +C+ N++++ M LL +EP ++GNY++ S I+A RW+D +RMR L
Sbjct: 499 EVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVL 558
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+R + + KTPGCS IE+ N+V EF +GD +D+ ++ LL
Sbjct: 559 MRQRGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLL 602
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 189/486 (38%), Positives = 297/486 (61%), Gaps = 38/486 (7%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+E E R + L + +L +IH IL++ L QSN +++ I VC + + YA+L+F
Sbjct: 6 REAERRILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFH 65
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAIN---LYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
Q + PN+ L+N+MI+ Y+ L G + N L+ QM I PD+FT ++KSC
Sbjct: 66 QTQNPNLLLFNSMIKGYS---LCGPSENSLLLFSQM-----KNRGIWPDEFTFAPLLKSC 117
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+G+ +GK +H V G + S ++DLY C + +A KVF+EM DRD
Sbjct: 118 SGICDNRIGKGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRD----- 172
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
M ++VSW +MI+G G EAL++FR+M G EP
Sbjct: 173 ---------------------MRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEP 211
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQL 306
D+ ++V++LP CA+LG++++GEWIH Y + + LLR + + N+L++ Y KCG + A ++
Sbjct: 212 DDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRV 271
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F++M +++VVSW+ +I GL +GK LF EM V PND TF+G+LS CAH G
Sbjct: 272 FNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLV 331
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
G F SM DH +E K+EH+GC+VDLL R G +++A +++ MPM+P+A +WGSLLS
Sbjct: 332 ERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLS 391
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+ RT +++ A A++ L+ LEP ++GNYVLLSN+YA+ G+W++V ++R L++ K+++K
Sbjct: 392 AYRTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKN 451
Query: 487 PGCSLI 492
PG S++
Sbjct: 452 PGQSMV 457
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 194/524 (37%), Positives = 296/524 (56%), Gaps = 69/524 (13%)
Query: 29 ELKKIHTQILKYLLS-------------QSNFLV------------------TKMIDVCN 57
E K+IH QILKY L+ N +V T MI
Sbjct: 96 EGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYA 155
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
S G++ A +F ++ +V +NAMI Y Y A+ L+ +M++ + PD+
Sbjct: 156 SRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMD-----VKPDE 210
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
T+ V+ +C LG+QIH+ + G S+ NAL+DLY KC
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKC------------ 258
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
G+M++A LF+ + Y ++SW +I GY +I + EAL VF
Sbjct: 259 -------------------GEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVF 299
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN--HLLRRTVICNALIEMYI 295
++M +G P++++++S+LPACA LG++++G WIH+Y DK ++ T + +LI+MY
Sbjct: 300 QEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYA 359
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
KCG I A+Q+FD ++ + + S + +I G A HG+A A L M++ + P+DITF+G
Sbjct: 360 KCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVG 419
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
LLSAC+H G + G F SM D+ IE K+EHYGC++DLLGR+G +A +I M M+
Sbjct: 420 LLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTME 479
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
PD IWGSLL +C+ + NLE+ + + L+ +EP++ G+YVLLSNIYA RW+DV+R+R
Sbjct: 480 PDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVR 539
Query: 476 KLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
L+ K +KK PGCS IE+++ V EF+ GD P K+I+ +LE
Sbjct: 540 TLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLE 583
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 226/400 (56%), Gaps = 27/400 (6%)
Query: 38 LKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYG 94
+K L +N+ ++K++D C L YA +FK ++EPN +N MIR + +
Sbjct: 1 IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60
Query: 95 LAINLYKQMLRDPRTGSLIL-PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI 153
A+NLY M+ SL L P+ +T PF+ KSCA GKQIHA + K+GL
Sbjct: 61 SALNLYVYMI------SLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLH 114
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
+L+ +Y + + +AHKVF+ + RD+V++ +I+GYA G M KA+ +FD++P
Sbjct: 115 VHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKD 174
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
+VSW AMISGY IG Y EAL++F +M + ++PDE ++ +VL C G++ELG IH
Sbjct: 175 VVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHS 234
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA--NHGKA 331
+ D + + NALI++Y KCG + +A LF+ + +DV+SW+T+IGG A NH K
Sbjct: 235 WIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHK- 293
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MYFDSMKRDHHIEHKIEH 388
+A+ +F EM +L PND+T + +L ACAH G + G +Y D K+ I
Sbjct: 294 -EALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYID--KKLKGIITNTSL 350
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
L+D+ + G ++ A + + + K LSSC
Sbjct: 351 QTSLIDMYAKCGNIEAANQVFDTILNKS--------LSSC 382
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 178/373 (47%), Gaps = 54/373 (14%)
Query: 8 LSIKELEDRFVPILQSCENL--IEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
+ +K E +L +C + +EL ++IH+ I + + LV +ID+ + G++
Sbjct: 204 MDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263
Query: 65 ASLLFKQVKEPNVFLYNAMI--RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPF 122
A LF+ ++ +V +N +I AY N+H L + +++ML+ T P+ T+
Sbjct: 264 AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLV--FQEMLKLGET-----PNDVTMLS 316
Query: 123 VIKSCAGLLCPSLGKQIHAHVCK--FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
++ +CA L +G+ IH ++ K G+ +++ + +L+D+Y KC + A++VF+ + +
Sbjct: 317 ILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILN 376
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
+ + + N +I G+A G+ A D+ +M
Sbjct: 377 KSLSSCNAMIFGFAMHGRADA-------------------------------AFDLLSRM 405
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGC 299
+ GIEPD+I+ V +L AC+ G +LG I ++ + + +I++ + G
Sbjct: 406 KKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGL 465
Query: 300 INQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR--LKV-PPNDITFIG 355
+A +L + M +E D V W G L K HK + L + + +K+ P N +++
Sbjct: 466 FKEAEELINSMTMEPDGVIW----GSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVL 521
Query: 356 LLSACAHTGFWNE 368
L + A + W++
Sbjct: 522 LSNIYATSARWDD 534
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 174/414 (42%), Positives = 259/414 (62%), Gaps = 4/414 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELI 169
+ P T ++ C S LG +H + CK GL ++H + A+L +Y K +
Sbjct: 42 VEPTHITFIALLSGCGDFPSGSETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVK 101
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A VF+ M D++ V WN +I GY R GQ+ A LFDKMP ++SWTAM++G+ G
Sbjct: 102 KARLVFDYMDDKNSVTWNTMIDGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGF 161
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EAL FR+MQ+ G++PD ++I++ L AC LG+L LG W+H Y + N+
Sbjct: 162 HEEALVWFREMQISGVKPDYVAIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNS 221
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI++Y +CGC+ A ++FD+M +R VVSW++VI G A +G AH+++ F +MQ PN
Sbjct: 222 LIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPN 281
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G L+AC+H G +EGL +F SMKRD++I +IEHYGCLVDL RAGRL+ AL ++
Sbjct: 282 AVTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVV 341
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEI-AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
+ MPMKP+ + GSLL++CR + N + A M+HL L + NYV+LSN+YA +W
Sbjct: 342 QSMPMKPNEVVIGSLLAACRNHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKW 401
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
E SRMR+ ++ +KK PG S IE+++ F++GD I +LEL++
Sbjct: 402 EGASRMRRKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETAYIREVLELIS 455
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 38/248 (15%)
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL--GSLELGEW 270
TIVSWT+ I+ T AEA F M++ G+EP I+ +++L C GS LG+
Sbjct: 10 TIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGSETLGDL 69
Query: 271 IHMYC-----DKNHLL---------------------------RRTVICNALIEMYIKCG 298
+H Y D+NH++ + +V N +I+ Y++ G
Sbjct: 70 LHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMRSG 129
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
++ A +LFD+M E D++SW+ ++ G G +A+ F EMQ V P+ + I L+
Sbjct: 130 QVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAALN 189
Query: 359 ACAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
AC + G + GL ++ M +D ++ + L+DL R G ++ A + ++M K
Sbjct: 190 ACTNLGALSLGLWVHRYVMSQD--FKNNVRVSNSLIDLYCRCGCVEFAREVFDKME-KRT 246
Query: 418 AKIWGSLL 425
W S++
Sbjct: 247 VVSWNSVI 254
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ Y+ +++ MID G + A LF ++ EP++ + AM+ + + A
Sbjct: 106 VFDYMDDKNSVTWNTMIDGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEA 165
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + + +C L SLG +H +V K++ N
Sbjct: 166 LVWFREM-----QISGVKPDYVAIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSN 220
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP----YT 212
+L+DLY +C + A +VF++M R +V+WN++I G+A G ++ + F KM
Sbjct: 221 SLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKP 280
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQM-------------------------------- 240
V++T ++ +H+G E L F+ M
Sbjct: 281 NAVTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKV 340
Query: 241 -QMVGIEPDEISIVSVLPACAQLGS 264
Q + ++P+E+ I S+L AC G+
Sbjct: 341 VQSMPMKPNEVVIGSLLAACRNHGN 365
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 305/521 (58%), Gaps = 38/521 (7%)
Query: 14 EDRFVPILQSCENLIELKKIHT-QILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFK 70
E R + + C +L ++K++H +L+ LS + L ++I + G G A+A L+F
Sbjct: 8 ERRQPALWRRCRSLRQIKQVHALMVLRGFLSDPSAL-RELIFASSVGVRGGTAHARLVFD 66
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR-DPRTGSLILPDKFTLPFVIKSCAG 129
++ P+ F+YN +IR +++ A+++Y +M R G + PDK T PFV+++CA
Sbjct: 67 RIPHPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAA 126
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA------------------ 171
+ G Q+HAHV K G +S + NAL+ ++ C +L A
Sbjct: 127 MGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAM 186
Query: 172 -------------HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWT 218
++F+E +D+V+WN +I+ YA+LG M AR LFD P +VSW
Sbjct: 187 ISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWN 246
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK- 277
AMISGY GS+ +A+++F QMQ +G +PD ++++S+L ACA G ++ G +H +
Sbjct: 247 AMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGR 306
Query: 278 -NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
+ + TV+ NALI+MY KCG + A ++F M +++V +W+++IGGLA HG +AI
Sbjct: 307 FSRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAID 366
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
+F +M + V P++ITF+ +L AC+H G ++G YF+ M++ + IE ++HYGC+VD+L
Sbjct: 367 VFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDML 426
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
RAG L +A I M ++P+ IW +LL +CR + LE+A A + LL + +G++V
Sbjct: 427 SRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKARSDASGDFV 486
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
LLSNIYA G W MRKL+ + K GC++++ +++
Sbjct: 487 LLSNIYASVGEWLGSENMRKLMDDSGVNKEAGCAVVDGSSK 527
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 294/506 (58%), Gaps = 9/506 (1%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
DR +L C L ++H ++ + + ++ + L L + +
Sbjct: 36 DRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPD 95
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P Y + I A+++ L+ A+ L +ML G ++P TL + +C GL +
Sbjct: 96 PTTVFYTSAIHAHSSRGLHLAALALLSEML-----GRGLIPTSHTLSSSLPACHGL---A 147
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
LG+ +HA+ K L S ALL +Y + + A +F+EM D +V +++ YA
Sbjct: 148 LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYA 207
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
++G + AR LFD MP + W AMI GYT G EAL +FR M G++PDE++I+
Sbjct: 208 KMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIIL 267
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVER 313
L A AQLG+ E G W+H Y + ++ + ALI+MY KCG + A +F+ + ++
Sbjct: 268 ALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDK 327
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+V W+ +I G A HG + KA+ +F +++ + P DITFIGLL+AC+H+G +EG +F
Sbjct: 328 DIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFF 387
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM+ ++ I KIEHYGC+VDLLGRAG +++A ++++ M + PD +W SLL++CR + N
Sbjct: 388 QSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKN 447
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+ + ++L+ ++G Y+LLSNIYA G WE+V+R+R ++++ ++K PGCS IE
Sbjct: 448 MALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIE 507
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
V +V EFV+GD + P +I+ +LE
Sbjct: 508 VGRKVYEFVAGDMSHPRTDEIYAMLE 533
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 294/506 (58%), Gaps = 9/506 (1%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
DR +L C L ++H ++ + + ++ + L L + +
Sbjct: 35 DRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPD 94
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P Y + I A+++ L+ A+ L +ML G ++P TL + +C GL +
Sbjct: 95 PTTVFYTSAIHAHSSRGLHLAALALLSEML-----GRGLIPTSHTLSSSLPACHGL---A 146
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
LG+ +HA+ K L S ALL +Y + + A +F+EM D +V +++ YA
Sbjct: 147 LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYA 206
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
++G + AR LFD MP + W AMI GYT G EAL +FR M G++PDE++I+
Sbjct: 207 KMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIIL 266
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVER 313
L A AQLG+ E G W+H Y + ++ + ALI+MY KCG + A +F+ + ++
Sbjct: 267 ALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDK 326
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+V W+ +I G A HG + KA+ +F +++ + P DITFIGLL+AC+H+G +EG +F
Sbjct: 327 DIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFF 386
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM+ ++ I KIEHYGC+VDLLGRAG +++A ++++ M + PD +W SLL++CR + N
Sbjct: 387 QSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKN 446
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+ + ++L+ ++G Y+LLSNIYA G WE+V+R+R ++++ ++K PGCS IE
Sbjct: 447 MALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIE 506
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
V +V EFV+GD + P +I+ +LE
Sbjct: 507 VGRKVYEFVAGDMSHPRTDEIYAMLE 532
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 302/529 (57%), Gaps = 43/529 (8%)
Query: 2 AARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG- 60
A R+ + + E + +L + L + +LK L ++ ++T++ S
Sbjct: 10 APRLSPSAARAAEQHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRLFAASASAAP 69
Query: 61 ---DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL---AINLYKQMLRDPRTGSLIL 114
D A+LL V + FL N +IRA+ + ++ L A + MLR ++
Sbjct: 70 ALLDPLVAALLRPSVPL-DAFLANTLIRAHATSPIHSLRLRAAAFFPLMLR-----GAVV 123
Query: 115 PDKFTLPFVIKSCAGLL-CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHK 173
P+KFT PF++K+CA L P +G Q HA KFG + N L+ +Y
Sbjct: 124 PNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMY----------- 172
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
+ G G + AR +FD+MP + V+W+AMI GY G ++A
Sbjct: 173 --------------SCFGG----GFLGDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDA 214
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
+++FR+MQ G++ DE++++ VL A LG+LEL W+ + ++ + + +CNALI+
Sbjct: 215 VELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKSVTLCNALIDT 274
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
KCG ++ A +F+ M +R VVSW++VI LA G+ +A+ +F EM+ VPP+D+ F
Sbjct: 275 LAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAF 334
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
IG+L+AC+H G +EG YFD+MK ++ IE KIEHYGC+VD+ GRAG +++A+ + MP
Sbjct: 335 IGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMP 394
Query: 414 MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSR 473
++P+ IW SL+S+CR + LE+ LL P NY++LSN++A RW++ S
Sbjct: 395 IQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSE 454
Query: 474 MRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+R+ + + +KK PGCS++E++ EV EF++GD++ P KDI+ ++E +A
Sbjct: 455 IRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMA 503
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/477 (37%), Positives = 278/477 (58%), Gaps = 11/477 (2%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQVKEPNVFL 79
++C + LK IH + L ++ K+ + G L YA LF Q+ +PN F
Sbjct: 190 EACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFF 249
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA----GLLCPSL 135
YN +IR Y+ + ++ L+ QM R+ + PD FT F++K + L
Sbjct: 250 YNTLIRGYSKSSSPSQSVQLFNQMRRN-----CVDPDGFTFTFLLKGRSRMRIDLPLIVA 304
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
+IH V K G H NAL+ LY AH+VF EM D+V+W+ L+ + R
Sbjct: 305 SDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVR 364
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G+++ AR +F +MP +VSWT M+SGY EAL++FR+M+ VG+ PDE+++VSV
Sbjct: 365 AGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSV 424
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ AC LG LE G +H Y D+N +CNALI+MY KCGC++ A Q+F+ M + +
Sbjct: 425 ISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSL 484
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
++W+++I ANHG A A +F M + P+ +TF+ LL+A H G+ ++G F+S
Sbjct: 485 ITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFES 544
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+RD+ +E +EHYGC+VD+LGRAGRL++A +I M M + +WG+LL++CR Y ++E
Sbjct: 545 MQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVE 604
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
+ ++ L+ L+P++ G Y+LL +IY GR + +R+ + KKT GCS +
Sbjct: 605 MGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 661
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/551 (35%), Positives = 293/551 (53%), Gaps = 70/551 (12%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVKEPNVFLYNAMIRA 86
E++++H LK + F+ ++++ + + DL YA +F +++ ++ +N +I+
Sbjct: 28 EVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKC 87
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
Y N I L+ +++ + LPD FTLP VIK CA L GKQIH K
Sbjct: 88 YVENQFSHDGIVLFHELVHE------YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKI 141
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM------- 199
G S + +L+++Y KC E+ A KVF+ M D+D+V WN+LI GYAR G++
Sbjct: 142 GFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLF 201
Query: 200 ------------------------KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
+ AR LFD+MP +VSW AMI+GY G + AL+
Sbjct: 202 EEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALE 261
Query: 236 VFRQMQM-------------------------------VGIEPDEISIVSVLPACAQLGS 264
+F QM + +G P ++VSVL A + L
Sbjct: 262 LFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAV 321
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
L G WIH Y +KN ++ +LIEMY KCGCI A +F + ++ V W+ +I G
Sbjct: 322 LGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVG 381
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
L HG A+ A+ LF EM + + PN I FIG+L+AC H G ++G YFD M ++ IE
Sbjct: 382 LGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEP 441
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+EHYGCLVD+L RAG L++A N IE MP+ P+ IW SLL R + ++I A + +
Sbjct: 442 TLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRV 501
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
+ + PE G Y+LLSN+YA G WE VS +R+++ + +K PGCS +E + EF+ G
Sbjct: 502 IEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVG 561
Query: 505 DDTKPFLKDIF 515
D + P K+I+
Sbjct: 562 DISHPQTKEIY 572
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 45/289 (15%)
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG--KCDELIEAHKVFEEMTDRDIVAW 186
GL P +Q+HA K + +H + LL LY K ++L A +F+ + R ++ W
Sbjct: 22 GLCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHW 81
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
N +I Y ++ + IV + ++ Y
Sbjct: 82 NTIIKCYVE-----------NQFSHDGIVLFHELVHEYL--------------------- 109
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD ++ V+ CA+LG ++ G+ IH K + +L+ MY KCG I+ A ++
Sbjct: 110 PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKV 169
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND-ITFIGLLSACAHTGF 365
FD M+++DVV W+++I G A G+ A+ LF EM P D ++ L+ + G
Sbjct: 170 FDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM-----PERDAFSWTVLVDGLSKCGK 224
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM 414
FD M + + + +++ ++G D AL + +MP+
Sbjct: 225 VESARKLFDQMPCRNLVS-----WNAMINGYMKSGDFDSALELFYQMPI 268
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/521 (34%), Positives = 296/521 (56%), Gaps = 6/521 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C L E +L+ L F+V + G + A LF +
Sbjct: 128 FPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSP 187
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
++ +N +I Y A+ L+ +M+ + +++ PD+ T+ + C +
Sbjct: 188 VRDLVSWNTLIGGYVRRGNPAEALELFWRMVAE---DAVVRPDEVTMIAAVSGCGQMRDL 244
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+++H V G+ NAL+D+Y KC L A VFE + R +V+W +I G+
Sbjct: 245 ELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGF 304
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G M AR +FD+MP + W A+++GY EAL +F +MQ + PDEI++V
Sbjct: 305 AKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMV 364
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
++L AC+QLG+LE+G W+H Y +K+ L+ + +LI+MY KCG I +A +F ++ E+
Sbjct: 365 NLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEK 424
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+ ++W+ +I GLANHG A++AI F M L P++ITFIG+LSAC H G EG +F
Sbjct: 425 NALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFF 484
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M+ +H+E K++HY C++DLLGRAG LD+A ++ MPM+PDA +WG++ +CR N
Sbjct: 485 SLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGN 544
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+ + A L+ ++P D+G YVLL+N+YA+ + ++R ++R ++K PGCS IE
Sbjct: 545 ISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIE 604
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI 534
+N V EF+ D + I+ L + L D++ I
Sbjct: 605 LNGVVHEFIVKDKSHMDSHAIYDCLHEITLQIKHTADLLSI 645
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 180/398 (45%), Gaps = 74/398 (18%)
Query: 80 YNAMIRAYT-----NNHLYGLA---INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
YNA IRA + + H +G+ + LY+ +LR PD T PF++K+CA L
Sbjct: 84 YNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRS----GTARPDHLTFPFLLKACARLR 139
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
G AHV + GL S NA + +A ++F+ RD+V+WN LI
Sbjct: 140 EWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIG 199
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GY R G +A LF +M V + PDE++
Sbjct: 200 GYVRRGNPAEALELFWRMVAEDAV-----------------------------VRPDEVT 230
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+++ + C Q+ LELG +H + D + + + NAL++MYIKCG + A +F+++
Sbjct: 231 MIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIE 290
Query: 312 ERDVVSWSTVIGGLANHG-------------------------------KAHKAIHLFHE 340
R VVSW+T+I G A G + +A+ LFHE
Sbjct: 291 HRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHE 350
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
MQ V P++IT + LL+AC+ G G M+ H + + L+D+ + G
Sbjct: 351 MQEASVVPDEITMVNLLTACSQLGALEMG-MWVHRYIEKHRLVFSVALGTSLIDMYAKCG 409
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+++A++I +E+P K +A W +++ + + A+
Sbjct: 410 NIEKAIHIFKEIPEK-NALTWTAMICGLANHGHANEAI 446
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 34/286 (11%)
Query: 9 SIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
S+ E V +L +C L L+ +H I K+ L S L T +ID+ G++ A
Sbjct: 355 SVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKA 414
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+FK++ E N + AMI N+ AI ++ M+ + PD+ T V+
Sbjct: 415 IHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQK-----PDEITFIGVLS 469
Query: 126 SC--AGLLCPSLGKQIHAHV-CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DR 181
+C AGL+ G++ + + K+ L+ + ++DL G+ L EA ++ M +
Sbjct: 470 ACCHAGLV--KEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEP 527
Query: 182 DIVAWNNL-----ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
D V W + + G LG+ K A L + P + + + + + Y +A V
Sbjct: 528 DAVVWGAIFFACRMQGNISLGE-KAAMKLVEIDPSDSGI-YVLLANMYAEANMRKKADKV 585
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNHL 280
M+ +G+E +P C+ +EL +H + DK+H+
Sbjct: 586 RAMMRHLGVEK--------VPGCS---CIELNGVVHEFIVKDKSHM 620
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 186/506 (36%), Positives = 292/506 (57%), Gaps = 37/506 (7%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
E + + +S N + ++ +Q++ + + + K+ID S A ++LLF Q
Sbjct: 43 ESKHSHLTKSISNHAHMNQMLSQMIMNYIPIDHLNLMKLIDFSVSSHGFAASALLFTQFY 102
Query: 74 E-PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ L N+MIR YT+++ + ++ +Y QM ++ I PD T P V+KS A L
Sbjct: 103 GFIDSDLCNSMIRCYTDSNKHLHSVFIYTQMWKNG-----IFPDSSTFPTVLKSVAQLCR 157
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
LGK IH + + G +S+ AL+++YG C + +A +VF+E+ DR+IV+WN LI
Sbjct: 158 QELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALI-- 215
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+GY H + + +DVFR+MQ+ G +P E+++
Sbjct: 216 -----------------------------TGYNHNRMFRKVIDVFREMQIAGAKPVEVTM 246
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V VL ACA LG+L G WI Y D N L + ALI+MY KCG +++A ++F M
Sbjct: 247 VGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRV 306
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
++V +W+ +I G A +G+ A+ F M K P+++TF+G+L AC H G NEG Y
Sbjct: 307 KNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTY 366
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F SMK + + +IEHYGC+VDLLGRAG LD+A +I+ M M+PD IW LL +CR +
Sbjct: 367 FTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHG 426
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N+++ A++ LL LEP + NYVLL+N+YA+ RW+ V +R+++ + ++K PGCS I
Sbjct: 427 NIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSI 486
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLL 518
E++N V EFV + KP ++++ LL
Sbjct: 487 EIDNVVYEFVVSNYIKPGFEEVYKLL 512
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/499 (36%), Positives = 292/499 (58%), Gaps = 8/499 (1%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAM 83
C+++ ++K+ H ++ + K + + L YA LF Q+ +P++F+YN M
Sbjct: 189 CKSINQIKQTHANLITTAQITLPVIANKFLKNV-ALASLTYAHKLFDQIPQPDLFIYNTM 247
Query: 84 IRAYT-NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
I++++ + H Y +I +++ ++RD S P++++ F +C +C G+Q+ H
Sbjct: 248 IKSHSMSPHSYLDSIAVFRSLIRD----SGYFPNRYSFVFAFGACGNGMCVREGEQVFTH 303
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
K GL + NAL+ ++GK + +A VF+ DRD +WN +I Y G M A
Sbjct: 304 AVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLA 363
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
+ LFD+M +VSW+ +I+GY +G + EALD F +M ++P+E ++VS L AC+ L
Sbjct: 364 KELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNL 423
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF-DQMVERDVVSWSTV 321
+L+ G+WIH+Y ++++ + +LI+MY KCG I+ AS +F + V+R V W+ +
Sbjct: 424 VALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAM 483
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
IGG A HGK +AI++F +M+ KV PN +TFI LL+AC+H EG YF+ M D+
Sbjct: 484 IGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYG 543
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
I +IEHYGC+VDLL R+G L + +I MPM PD IWG+LL++CR Y ++E
Sbjct: 544 INPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIG 603
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS-MKKTPGCSLIEVNNEVQE 500
+ ++P G VLL NIY+ GRW + +R+ S KK PG S IE+N E
Sbjct: 604 RIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRKKIPGFSSIELNGVFHE 663
Query: 501 FVSGDDTKPFLKDIFWLLE 519
F+ GD + P ++I+ L+
Sbjct: 664 FLVGDRSHPQSREIYSFLD 682
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 302/505 (59%), Gaps = 46/505 (9%)
Query: 17 FVPILQSC--ENLIEL-KKIHTQILKYLLSQSNFLVTKMID---VCNSGGDLAYASLLFK 70
+ +LQSC IE K++H +I + +S + L TK+++ +CNS L A LLF
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNS---LTNAHLLFD 60
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + N+FL+N MIR Y N Y LAI+LY QM RD ++PDKFT PFV+K+C+ L
Sbjct: 61 RISKRNLFLWNVMIRGYAWNGPYELAISLYYQM-RDYG----LVPDKFTFPFVLKACSAL 115
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
GK+IH V + GL+S AL+D+Y KC
Sbjct: 116 SAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKC------------------------- 150
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
G ++ AR +FDK+ +V W +M++ Y+ G E+L + R M G++P E
Sbjct: 151 ------GCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEG 204
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ V + A A G L G+ +H Y ++ + AL++MY K G +N A LF+ +
Sbjct: 205 TFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELL 264
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
E+ VVSW+ +I G A HG A++A+ LF EM+ KV P+ ITF+G+L+AC+H G NEG
Sbjct: 265 EEKRVVSWNAMITGYAMHGHANEALDLFKEMKG-KVLPDHITFVGVLAACSHGGLLNEGK 323
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
M+F SM D +I ++HY C++DLLG GRL++A +I EM ++PDA +WG+LL SC+
Sbjct: 324 MHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKI 383
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ N+E+ +A+E L+ LEP+D GNYV+LSN+YA+ G+W+ V+R+R L+ +K +KK+ CS
Sbjct: 384 HGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACS 443
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIF 515
IEV N+V F+S D + P + I+
Sbjct: 444 WIEVGNKVHAFLSEDTSHPKSEAIY 468
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/507 (37%), Positives = 306/507 (60%), Gaps = 7/507 (1%)
Query: 20 ILQSCENLIELKKIHTQIL-KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVF 78
+LQSC +L+ LK+IH Q L + LL L K+++ G+ A +F +++P+
Sbjct: 9 LLQSCADLVTLKQIHAQALTQGLLFIEQPLACKLVNRYAKLGNPRDAQKVFGYIQDPDRV 68
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
Y ++I Y + L A +++ +++ + + PD ++ + +C GK
Sbjct: 69 TYTSLINLYLSTQLPIKAFSVFSKLVNEG-----LRPDSHSVVGALSACGKKQDLLNGKL 123
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+H + +F L ++SI NAL+D+Y + E+ A VF++M +D+ +W +L++G+
Sbjct: 124 VHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMCNG 183
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLP 257
++ AR +FD+MP+ V+WTAMI+GY G L++FRQM+ G +P I+ V+VL
Sbjct: 184 LESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAVLS 243
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
CA LG+ + G+ +H Y K +L + + NAL++MY K GC+ A ++FD++V++DV S
Sbjct: 244 GCADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVKKDVFS 303
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+T+I ++HGK + A+ +F++M V PND+TF+ +LS C+H+G E F+ M
Sbjct: 304 WTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKLFNGMI 363
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ + E KIEHYGC+VDLL RAG L++A +I+ MPM PDA IW SLLS+C NL +A
Sbjct: 364 QCYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMDPDAVIWRSLLSACMNQRNLGLA 423
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
IA + ++ LEP D G YVLLSNIY R +D +MRK++ + + K P CS IE+N
Sbjct: 424 EIAGKKIIELEPHDDGVYVLLSNIYHVANRMKDARKMRKMMGDQKVMKKPACSYIELNGV 483
Query: 498 VQEFVSGDDTKPFLKDIFWLLELLALH 524
V +F + + T I+ LLE++ H
Sbjct: 484 VHQFHTENATHHASTKIYMLLEMINEH 510
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/536 (35%), Positives = 313/536 (58%), Gaps = 17/536 (3%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
AA G L+ + + C+ +++ +K+ + + + + + MI + G
Sbjct: 129 FAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDR----MPDRDVVVWSAMIAGYSRLG 184
Query: 61 DLAYASLLFKQVK----EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPD 116
+ A LF +++ EPN+ +N M+ + NN Y A+ +++ ML PD
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQG-----FWPD 239
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
T+ V+ + L +G Q+H +V K GL S +A+LD+YGKC + E +VF+
Sbjct: 240 GSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFD 299
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP----YTTIVSWTAMISGYTHIGSYAE 232
E+ + +I + N ++G +R G + A +F+K +V+WT++I+ + G E
Sbjct: 300 EVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLE 359
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
AL++FR MQ G+EP+ ++I S++PAC + +L G+ IH + + + + +ALI+
Sbjct: 360 ALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALID 419
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
MY KCG I A + FD+M ++VSW+ V+ G A HGKA + + +FH M + P+ +T
Sbjct: 420 MYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVT 479
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
F +LSACA G EG ++SM +H IE K+EHY CLV LL R G+L++A +II+EM
Sbjct: 480 FTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEM 539
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVS 472
P +PDA +WG+LLSSCR ++NL + IA E L LEP + GNY+LLSNIYA G W++ +
Sbjct: 540 PFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEEN 599
Query: 473 RMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
R+R++++SK ++K PG S IEV ++V ++GD + P +KDI L+ L + ++
Sbjct: 600 RIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKS 655
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 216/435 (49%), Gaps = 54/435 (12%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL---LFKQVKEPNVFL 79
S +L + ++ H IL+ L L T ++ + L+ L L + P +F
Sbjct: 12 STASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFS 71
Query: 80 YNAMIRAYTNNHLYGLAINLYKQM--LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++++I A+ +H + + + + LR ++PD F LP IKSCA L G+
Sbjct: 72 FSSLIHAFARSHHFPHVLTTFSHLHPLR-------LIPDAFLLPSAIKSCASLRALDPGQ 124
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
Q+HA G + SI ++L +Y KCD +++A K+F+ M DRD+V W+ +I+GY+RLG
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184
Query: 198 QMKKARMLFDKMPY----TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+++A+ LF +M +VSW M++G+ + G Y EA+ +FR M + G PD ++
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF------ 307
VLPA L + +G +H Y K L + +A+++MY KCGC+ + S++F
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304
Query: 308 -----------------------------DQMVERDVVSWSTVIGGLANHGKAHKAIHLF 338
DQ +E +VV+W+++I + +GK +A+ LF
Sbjct: 305 EIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELF 364
Query: 339 HEMQRLKVPPNDITFIGLLSACAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLG 397
+MQ V PN +T L+ AC + G ++ S++R I + L+D+
Sbjct: 365 RDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRG--IFDDVYVGSALIDMYA 422
Query: 398 RAGRLDQALNIIEEM 412
+ GR+ A ++M
Sbjct: 423 KCGRIQLARRCFDKM 437
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/414 (41%), Positives = 258/414 (62%), Gaps = 4/414 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELI 169
+ P+ T ++ C + S LG +H + CK GL ++H + A+L +Y K
Sbjct: 61 VEPNHITFIALLSGCGDVSSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFG 120
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A VF+ M D++ V WN +I GY R GQ+ A LFD+MP ++SWTAMI+G+ G
Sbjct: 121 KARLVFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGF 180
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EAL FR+MQ+ G++PD ++I++ L AC LG+L G W+H Y + N+
Sbjct: 181 HEEALAWFREMQISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNS 240
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI++Y +CGC+ A ++FD+M +R VVSW++VI G A +G AH+++ F +MQ P+
Sbjct: 241 LIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPD 300
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G L+AC+H G EGL YF +MKRDH I +IEHYGCLVDL RAGRL+ ALN++
Sbjct: 301 AVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVV 360
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEI-AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
+ MPMKP+ + GSLL++CR + N + A ++HL L + NYV+LSN+YA G W
Sbjct: 361 QSMPMKPNEVVIGSLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAADGIW 420
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
E S+MR+ ++ +KK PG S +E+++ F++GD I +LEL++
Sbjct: 421 EGASKMRRKMKGLGLKKQPGFSSVEIDDCTHVFMAGDSAHVETAYIREVLELIS 474
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 36/247 (14%)
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL--GSLELGEW 270
T VSWT+ I+ + G AEA F M++ G+EP+ I+ +++L C + GS LG+
Sbjct: 29 TTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGSEALGDL 88
Query: 271 IHMYC-----DKNHLL---------------------------RRTVICNALIEMYIKCG 298
+H Y D+ H++ + +V N +I+ Y++ G
Sbjct: 89 LHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMRSG 148
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+N A +LFD+M ERD++SW+ +I G G +A+ F EMQ V P+ + I L+
Sbjct: 149 QVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALA 208
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC H G + GL + + ++ I L+DL R G ++ A + ++M K
Sbjct: 209 ACTHLGALSFGL-WVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKME-KRTV 266
Query: 419 KIWGSLL 425
W S++
Sbjct: 267 VSWNSVI 273
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 42/265 (15%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ ++ +++ MID G + A LF ++ E ++ + AMI + + A
Sbjct: 125 VFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEA 184
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + + +C L S G +H +V K++ N
Sbjct: 185 LAWFREM-----QISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSN 239
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI-- 214
+L+DLY +C + A +VF++M R +V+WN++I G+A G ++ + F KM
Sbjct: 240 SLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKP 299
Query: 215 --VSWTAMISGYTHIGSYAEALDVFRQM-------------------------------- 240
V++T ++ +H+G E L F+ M
Sbjct: 300 DAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNV 359
Query: 241 -QMVGIEPDEISIVSVLPACAQLGS 264
Q + ++P+E+ I S+L AC G+
Sbjct: 360 VQSMPMKPNEVVIGSLLAACRNHGN 384
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 44/158 (27%)
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
+Q VSW++ I L+ +G+ +A F M+ V PN ITFI LLS C
Sbjct: 22 LNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSG 81
Query: 367 NEGL--------------------------MY------------FDSMKRDHHIEHKIEH 388
+E L MY FD M+ + +
Sbjct: 82 SEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVT----- 136
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ ++D R+G+++ A+ + +EMP + D W ++++
Sbjct: 137 WNTMIDGYMRSGQVNNAVKLFDEMPER-DLISWTAMIN 173
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/477 (37%), Positives = 278/477 (58%), Gaps = 11/477 (2%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQVKEPNVFL 79
++C + LK IH + L ++ K+ + G L YA LF Q+ +PN F
Sbjct: 3 EACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFF 62
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA----GLLCPSL 135
YN +IR Y+ + ++ L+ QM R+ + PD FT F++K + L
Sbjct: 63 YNTLIRGYSKSSSPSQSVQLFNQMRRN-----CVDPDGFTFTFLLKGRSRMRIDLPLIVA 117
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
+IH V K G H NAL+ LY AH+VF EM D+V+W+ L+ + R
Sbjct: 118 SDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVR 177
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G+++ AR +F +MP +VSWT M+SGY EAL++FR+M+ VG+ PDE+++VSV
Sbjct: 178 AGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSV 237
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ AC LG LE G +H Y D+N +CNALI+MY KCGC++ A Q+F+ M + +
Sbjct: 238 ISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSL 297
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
++W+++I ANHG A A +F M + P+ +TF+ LL+A H G+ ++G F+S
Sbjct: 298 ITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFES 357
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+RD+ +E +EHYGC+VD+LGRAGRL++A +I M M + +WG+LL++CR Y ++E
Sbjct: 358 MQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVE 417
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
+ ++ L+ L+P++ G Y+LL +IY GR + +R+ + KKT GCS +
Sbjct: 418 MGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 474
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 289/494 (58%), Gaps = 13/494 (2%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---LAYASLLFKQVKEPN 76
+L+ C L +LK+IH +L+ L +S F + +++ + + + ++A L+F+ + N
Sbjct: 17 LLKKCRALSQLKQIHANLLQSHLPESPFAIGQLLSLAATSNNPSFFSHACLIFQNLSLRN 76
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS-- 134
+F+YN+MIR Y +H AI Y ML +L + +T P +IK+C L S
Sbjct: 77 IFMYNSMIRGYVLSHSPTRAILCYLDMLNYG-----LLANNYTFPPLIKACTTLGSSSKL 131
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
+G +HAHV FG +AL++ Y ++ A +F+ + +RD+V W +I GY
Sbjct: 132 IGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYG 191
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
++G ++ AR+LF+ MP +SW+A+++ Y+ +G + E L +FR+MQ G P+E +VS
Sbjct: 192 KMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVS 251
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
VL ACA LG+L G W+H Y + + ++ AL++MY KCGC+ A F + +D
Sbjct: 252 VLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKD 311
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+W+ +I G+A +G A K++ LF++M P + TF+ +L+AC H EGL F+
Sbjct: 312 AGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFE 371
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP---MKPDAKIWGSLLSSCRTY 431
M ++ +E ++EHY CLVDL+ RAG L +A IEE + DA +WG++L +CRTY
Sbjct: 372 QMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAMLGACRTY 431
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+E+ + L + D G +VL N+Y + G + R+R+LI MKK PGCS+
Sbjct: 432 GNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEAGMKKKPGCSI 491
Query: 492 IEVNNEVQEFVSGD 505
IEV+ V+EF++GD
Sbjct: 492 IEVDGTVEEFLAGD 505
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/514 (36%), Positives = 288/514 (56%), Gaps = 49/514 (9%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
++ C +LK+IH Q+L+ L F +++I + L YA +F Q+ PN+
Sbjct: 41 LIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNL 100
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+ +N +IRAY ++ ++ ++ +ML S PDKFT PF+IK+ + L GK
Sbjct: 101 YTWNTLIRAYASSSNPHQSLLIFLRMLHQ----SPDFPDKFTFPFLIKAASELEELFTGK 156
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
H V K L S D+ N+LI YA+ G
Sbjct: 157 AFHGMVIKVLLGS-------------------------------DVFILNSLIHFYAKCG 185
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
++ +F P +VSW +MI+ + G EAL++F++M+ ++P+ I++V VL
Sbjct: 186 ELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLS 245
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACA+ E G W+H Y ++N + + NA+++MY KCG + A +LFD+M E+D+VS
Sbjct: 246 ACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVS 305
Query: 318 WSTVI------------GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
W+T++ GLA HG AI LF +MQ KV PN +TF +L AC+H G
Sbjct: 306 WTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGL 365
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
EG +F+ M+ + + ++HY C+VD+LGRAG L++A+ +IE+MPM P A +WG+LL
Sbjct: 366 VEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALL 425
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+C + N+ +A A L+ LEP + G YVLLSNIYAK G+W+ VS +RKL+R +KK
Sbjct: 426 GACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKK 485
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
PGCS IEV+ V EF+ GD++ P K I+ L+
Sbjct: 486 EPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLD 519
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 130/274 (47%), Gaps = 9/274 (3%)
Query: 159 LDLYGKCDELIEAHKVFEEMTDR----DIVAWNNLISGYA--RLGQMKKARMLFDKMPYT 212
L L +C E + ++ +M D + + LI+ A + A+ +FD++P+
Sbjct: 39 LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98
Query: 213 TIVSWTAMISGYTHIGSYAEALDVF-RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI 271
+ +W +I Y + ++L +F R + PD+ + ++ A ++L L G+
Sbjct: 99 NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H K L I N+LI Y KCG + ++F RDVVSW+++I G
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCP 218
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
+A+ LF EM+ V PN IT +G+LSACA + G ++R+ I +
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERN-RIXESLTLSNA 277
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
++D+ + G ++ A + ++MP K D W ++L
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKMPEK-DIVSWTTML 310
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 293/505 (58%), Gaps = 38/505 (7%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYN 81
Q C N LK+IHTQI+ LS + ++ +I + +S +L YA +F + P +FLYN
Sbjct: 157 QKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIKI-SSKFNLPYAFKIFNYISNPTIFLYN 215
Query: 82 AMIRAY---TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS---- 134
+I + TN + LA +LY ++L T + P+ FT P + K+C C +
Sbjct: 216 TLISSLINQTNQNQIHLAFSLYNKIL----TNKNLQPNSFTFPSLFKAC----CSNQSWF 267
Query: 135 -LGKQIHAHVCKFGLKSH-SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
G +H HV KF + + +LL+ Y K ++ + +F+ + + D+ WN +++
Sbjct: 268 HYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNA 327
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YAR FD ++ E+L +FR MQ++GI P+E++I
Sbjct: 328 YARSSSYHSYSNSFDDADFSL------------------ESLYLFRDMQVIGIRPNEVTI 369
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V+++ AC+ LG++ G W+H + +N + + A ++MY KCGC+N A Q+FD+M E
Sbjct: 370 VALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPE 429
Query: 313 --RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
RD ++ +IGG A HG ++A+ L+ +M+ + P+ TF+ + AC+H G EGL
Sbjct: 430 NDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGL 489
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
F SMK H +E K+EHYGCL+DLLGRAGRL +A + +MPMKP+A +W SLL + R
Sbjct: 490 EIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARI 549
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ NL + +A+ L+ LEPE +GNYVLLSN+YA GR DV R+RKL++ + K PG S
Sbjct: 550 HGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFS 609
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIF 515
L+E+ + EF++GD + PF K+I+
Sbjct: 610 LVEIKGAMHEFLTGDRSHPFSKEIY 634
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/570 (33%), Positives = 303/570 (53%), Gaps = 78/570 (13%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ ++ S + +LK+IH ++L L S FL+TK+I +S GD+ +A +F + P
Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+F +NA+IR Y+ N+ + A+ +Y M + + PD FT P ++K+C+GL +G
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNM-----QLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 137 KQIHAHVCKFGLKSHSITENALLDL---------------------------------YG 163
+ +HA V + G + +N L+ L Y
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 164 KCDELIEAHKVFEEMTDRDIVA-WNNLIS------------------------------- 191
+ E +EA ++F M D+ W L+S
Sbjct: 199 QNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 192 -------GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
YA+ GQ+ A++LFDKM ++ W AMISGY G EA+D+F +M
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ PD ISI S + ACAQ+GSLE ++ Y ++ I +ALI+M+ KCG + A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+FD+ ++RDVV WS +I G HG+A +AI L+ M+R V PND+TF+GLL AC H+G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
EG +F+ M DH I + +HY C++DLLGRAG LDQA +I+ MP++P +WG+L
Sbjct: 439 MVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LS+C+ + ++E+ A + L ++P +TG+YV LSN+YA W+ V+ +R ++ K +
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
K GCS +EV ++ F GD + P ++I
Sbjct: 558 KDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 308/564 (54%), Gaps = 71/564 (12%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
L C NL ++K++H QI++ L + + K+I + A +F QV+EPNV L
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N++IRA+ N A ++ +M R + D FT PF++K+C+G + K +H
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFG-----LFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 141 AHVCKFGLKSHSITENALLDLYGKCD---------------------------------E 167
H+ K GL S NAL+D Y +C E
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
L +A ++F+EM RD+++WN ++ GYAR +M KA LF+KMP VSW+ M+ GY+
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 228 GSYAEALDVFRQM-------------------------------QMV--GIEPDEISIVS 254
G A +F +M QMV G++ D +++S
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
+L AC + G L LG IH +++L + NAL++MY KCG + +A +F+ + ++D
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+VSW+T++ GL HG +AI LF M+R + P+ +TFI +L +C H G +EG+ YF
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
SM++ + + ++EHYGCLVDLLGR GRL +A+ +++ MPM+P+ IWG+LL +CR ++ +
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
+IA +++L+ L+P D GNY LLSNIYA WE V+ +R ++S ++K G S +E+
Sbjct: 501 DIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLL 518
+ + EF D + P I+ +L
Sbjct: 561 EDGIHEFTVFDKSHPKSDQIYQML 584
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/503 (36%), Positives = 292/503 (58%), Gaps = 14/503 (2%)
Query: 28 IELKKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+ IH + K LL L T ++ + G +A LF ++ ++ AM RA
Sbjct: 27 LSASGIHCLLFKAGLLHAGAHLPTALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARA 86
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL-LCP---SLGKQIHAH 142
+ + A++L++ M+ D +PD L V+ +C G C S G+ +HA
Sbjct: 87 HAVSGQAAQALDLFQDMIADG-----FMPDNVALAVVLAACHGAGSCTARRSPGRMVHAF 141
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
+ G++ L+ +YG+ E+ A +VF+ M + +AWN ++ Y R ++ A
Sbjct: 142 IVACGIEPDVFVSTELIRVYGERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAA 201
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM---QMVGIEPDEISIVSVLPAC 259
LF MP +VSW +I+GY +G EAL +FRQM + P+ ++ +VL AC
Sbjct: 202 YRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTVLSAC 261
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERDVVSW 318
A G LE G W+H+Y DKN + + LI+MY KCG I++A Q+F++ +RD+ SW
Sbjct: 262 AGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSW 321
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+TVI GLA HG+A+ + +F MQ + P+D+TF+G+L+ACAH G +EGL +F SM+
Sbjct: 322 TTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFYSMQE 381
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+ I KIEHYGC++DLLGR GRL +A +I+ MPMKP+ IWG+ LS+C+ +S++E+
Sbjct: 382 KYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVIWGAFLSACKVHSSVELGE 441
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
IA + L+P+D V++S++YAK W ++R R+ + S MKKTPGCS + ++ EV
Sbjct: 442 IAAAEVTRLDPDDPWARVMMSSMYAKAQDWSGLARERREMNSLQMKKTPGCSSVALDGEV 501
Query: 499 QEFVSGDDTKPFLKDIFWLLELL 521
EFV+G + P +I +LE +
Sbjct: 502 HEFVAGGNQHPLCAEICSVLETV 524
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 287/482 (59%), Gaps = 13/482 (2%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
V + + C ++ K IH + L Q ++ K+ + GDL+YA +F Q+ +P
Sbjct: 11 VYMAEKCISMRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQP 70
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
F YN +IRA++++ + + +M R+ I PD+F+ F++KS + L
Sbjct: 71 TTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNS-----IAPDEFSFTFLLKSRS--FTMPL 123
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT----DRDIVAWNNLIS 191
IH V KFG H +NAL+ LY I A KVFE+ D DIV+W+ L+
Sbjct: 124 VHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLV 183
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
+A+ G++ AR +FD MP +VSWT M+S Y+ E LD+F++M++ G+ PDE++
Sbjct: 184 AHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVT 243
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
++SV+ ACA+LG E+G +H + ++N +CN+LI+MY KCGC+ +A Q+FD+
Sbjct: 244 VLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTK 303
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+ +++W+ ++ ANHG A A LF M V P+ +T + LL A AH GF +EG+
Sbjct: 304 RKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIR 363
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
F+SM+RD+ +E +IEHYG +VD+LGR+GRL +A N++ MP+ + IWG+LL +CR +
Sbjct: 364 LFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIH 423
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
++ + ++ LL L+P++ G Y+LL +IY GR + + MR+ + + +K PGCS
Sbjct: 424 GDVGMGERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSW 483
Query: 492 IE 493
+E
Sbjct: 484 VE 485
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 281/454 (61%), Gaps = 9/454 (1%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A LF ++ E ++ + M+ Y Y ++ L++QM + ++PD+ L V+
Sbjct: 321 ARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFEN-----VIPDEVALVTVL 375
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
+C L LG+ +HA + +G+ NALLDLY KC +L EA + FE++ +
Sbjct: 376 SACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAA 435
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+WN+++ G+ R G + KAR F+K+P IVSW M++ Y + E+ ++F +MQ
Sbjct: 436 SWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSN 495
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
++PD+ +++S+L +CA++G+L G W+++Y +KN + ++ ALI+MY KCGC+ A
Sbjct: 496 VKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAY 555
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++F Q++E++V W+ ++ A G+A +AI L+ EM+ V P+ +TFI LL+AC+H G
Sbjct: 556 EIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGG 615
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+EG YF+ ++ ++I I HYGC+VDLLGR G L++ + IE MP++PD IW SL
Sbjct: 616 LVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSL 675
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+ +CR++ N+E+A A + L+ ++P + G +VLLSNIYA GRW+DVS++R + +
Sbjct: 676 MRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVP 735
Query: 485 KTPGCSLIEVNNEVQEFVSGD----DTKPFLKDI 514
K PG ++IE N V EFV+ + D L+DI
Sbjct: 736 KQPGFTMIEQNGVVHEFVASNLVSADILCMLQDI 769
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 225/429 (52%), Gaps = 40/429 (9%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
++H +ILK ++ L ++ + + G L LF+++ +V +N MI Y
Sbjct: 154 EVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKG 213
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
+Y A++L+ +ML S +LPD+ T+ ++ +CA L +GK++H ++ L
Sbjct: 214 MYREALDLFDEMLV-----SGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIR 268
Query: 152 SITENALLDLYGKCDELIEAHKVFE--EMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
N L+D+Y KC ++ EAH + + ++ D+V W L+SGY + ++ KAR LFDKM
Sbjct: 269 GSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKM 328
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
++VSWT M+SGY G Y E+L++F+QM+ + PDE+++V+VL AC L +LG
Sbjct: 329 NERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGR 388
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM------------------- 310
+H + +L + NAL+++Y KCG +++A + F+Q+
Sbjct: 389 SVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSG 448
Query: 311 ------------VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
E+D+VSW+T++ H +++ +F +MQ V P+ T I LLS
Sbjct: 449 GVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLS 508
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
+CA G N G+ + + + I L+D+ G+ G ++ A I ++ ++ +
Sbjct: 509 SCAKVGALNHGI-WVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI-IEKNV 566
Query: 419 KIWGSLLSS 427
+W +++++
Sbjct: 567 FVWTAMMAA 575
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 206/456 (45%), Gaps = 90/456 (19%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+ +L+SC N+ E IH ++ L + ++++ S +L A + EP
Sbjct: 39 IDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPES 98
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++N ++ + Y M+ +L D T F+I +C LG
Sbjct: 99 IIWNTLLENKLKEGCPQEVLECYYHMVTQG-----VLLDISTFHFLIHACCKNFDVKLGS 153
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
++H + K G + N L+ LY KC +L E ++FE+MT RD+++WN +IS Y G
Sbjct: 154 EVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKG 213
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ EALD+F +M + G+ PDEI++VS++
Sbjct: 214 MYR-------------------------------EALDLFDEMLVSGVLPDEITMVSLVS 242
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG-----------C------- 299
CA+L LE+G+ +H+Y N L R + N L++MY KCG C
Sbjct: 243 TCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDV 302
Query: 300 ---------------INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
I++A QLFD+M ER +VSW+T++ G G +++ LF +M+
Sbjct: 303 VLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFE 362
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV---------DL 395
V P+++ + +LSAC H L FD + H I YG LV DL
Sbjct: 363 NVIPDEVALVTVLSACVH-------LEDFDLGRSVHAF---IVTYGMLVDGFLGNALLDL 412
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS-CRT 430
+ G+LD+AL E++P K A W S+L CR+
Sbjct: 413 YAKCGKLDEALRTFEQLPCKSAAS-WNSMLDGFCRS 447
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGG 60
++ + ++K + + +L SC + L ++ I K + L T +ID+ G
Sbjct: 490 KMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCG 549
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+ A +F Q+ E NVF++ AM+ AY AI+LY +M + R + PD T
Sbjct: 550 CVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEM--EERG---VKPDHVTF 604
Query: 121 PFVIKSCA-GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM- 178
++ +C+ G L K + + + ++DL G+ L E K E M
Sbjct: 605 IALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMP 664
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+ D+ W++L+ ++ A F ++
Sbjct: 665 IEPDVSIWSSLMRACRSHHNVELAEQAFKQL 695
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 176/512 (34%), Positives = 309/512 (60%), Gaps = 9/512 (1%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L C N + ++IH +++ ++++ + T+++ + + G L YA +F ++
Sbjct: 482 FTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 541
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E N + +N+MI Y N A+ L+KQM + I PD F+L ++ SC L
Sbjct: 542 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG-----IKPDCFSLSSMLSSCVSLSDS 596
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+++H + + ++ I + L+D+Y KC + A KV+++ +D++ N ++S +
Sbjct: 597 QKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAF 656
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G+ A+ LFD+M W ++++GY + G E+ + F +M IE D +++V
Sbjct: 657 VNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMV 716
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALIEMYIKCGCINQASQLFDQMVE 312
+++ C+ L +LE G+ +H K + +V+ AL++MY KCG I +A +FD M
Sbjct: 717 TIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNG 776
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+++VSW+ +I G + HG + +A+ L+ EM + + PN++TF+ +LSAC+HTG EGL
Sbjct: 777 KNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRI 836
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F SM+ D++IE K EHY C+VDLLGRAGRL+ A +E+MP++P+ WG+LL +CR +
Sbjct: 837 FTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHK 896
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
++++ +A + L L+P++ G YV++SNIYA GRW++V +R++++ K +KK PG S I
Sbjct: 897 DMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWI 956
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
E+N+E+Q F +G T P ++I+ L L L
Sbjct: 957 EINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQ 988
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 202/413 (48%), Gaps = 42/413 (10%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++++C E++ ++++ + ++K L+ + F+ ++D G + A +++
Sbjct: 178 FPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIE 237
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +NA+I Y + A ++ +ML+ + PD FT ++ C L
Sbjct: 238 GTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIG-----VCPDNFTFASALRVCGALRSR 292
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GKQ+H+ + G K + NAL+D+Y KCD+ KVF+EM +R+ V WN++IS
Sbjct: 293 DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAE 352
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G + +AL +F +MQ G + + ++
Sbjct: 353 AQFGH-------------------------------FNDALVLFLRMQESGYKSNRFNLG 381
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L A A L + G +H + +N L ++ +AL++MY KCG + +A Q+F ++ER
Sbjct: 382 SILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLER 441
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGLMY 372
+ VS++ ++ G GKA +A+ L+H+MQ + P+ TF LL+ CA+ N+G
Sbjct: 442 NEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQI 501
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ R +I I LV + GRL+ A I M + +A W S++
Sbjct: 502 HAHLIR-ANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER-NAYSWNSMI 552
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 177/402 (44%), Gaps = 43/402 (10%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG---DLAYASLLFK 70
+ ++Q C + K IHTQ++ + +L+TK++ + G DL YA LF+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ E N+ +N MI AY Y + LY +M GS DKFT P VIK+C +
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEVLRLYGRM-----RGSGNFSDKFTFPSVIKACIAM 188
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
+Q+ + V K GL + AL+D Y + + +A +E+ +V WN +I
Sbjct: 189 EDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVI 248
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+GY + I+SW EA +F +M +G+ PD
Sbjct: 249 AGYVK------------------ILSWE-------------EAWGIFDRMLKIGVCPDNF 277
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ S L C L S + G+ +H T + NALI+MY KC ++FD+M
Sbjct: 278 TFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEM 337
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
ER+ V+W+++I A G + A+ LF MQ N +L A A +G
Sbjct: 338 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGR 397
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
+ R+ + I LVD+ + G +++A + +
Sbjct: 398 ELHGHLVRN-LLNSDIILGSALVDMYSKCGMVEEAHQVFRSL 438
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 181/386 (46%), Gaps = 38/386 (9%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
K++H++++ F+ +ID+ D +F ++ E N +N++I A
Sbjct: 296 KQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQF 355
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ A+ L+ +M S ++F L ++ + AGL G+++H H+ + L S
Sbjct: 356 GHFNDALVLFLRMQE-----SGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNS 410
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
I +AL+D+Y KC G +++A +F +
Sbjct: 411 DIILGSALVDMYSKC-------------------------------GMVEEAHQVFRSLL 439
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV-GIEPDEISIVSVLPACAQLGSLELGE 269
VS+ A+++GY G EAL+++ MQ GI+PD+ + ++L CA + G
Sbjct: 440 ERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGR 499
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
IH + + ++ + ++ L+ MY +CG +N A ++F++M ER+ SW+++I G +G
Sbjct: 500 QIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNG 559
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+ +A+ LF +MQ + P+ + +LS+C +G + + R+ E I
Sbjct: 560 ETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV 619
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMK 415
LVD+ + G +D A + ++ K
Sbjct: 620 -VLVDMYAKCGSMDYAWKVYDQTIKK 644
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 288/507 (56%), Gaps = 47/507 (9%)
Query: 3 ARIGALSIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSG 59
AR+ ++ F +L++C + +H + ++ L+ F V +I
Sbjct: 102 ARMRRCGVRPDAYTFPAVLKACGCAPGCRAGLLVHAEAVRRGLAADLFTVNALISFYCRI 161
Query: 60 GDLAYASLLFKQVK--EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
D+ +F + ++ +N+M+ Y GLA ++ +M P K
Sbjct: 162 LDIRSGRKVFDEAGGVSRDLVSWNSMVAGYVGCGEMGLAQEMFDEM-----------PQK 210
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
T + L GKQ A V + A ++F++
Sbjct: 211 DTFSWAT------LIDGYGKQGGAGVDR-------------------------ARELFDQ 239
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M +RD+V WN++I GYAR G+M +AR LF++MP ++SW+ +I G+ G EAL+ F
Sbjct: 240 MPERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEAKEALEYF 299
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
+ M G+ PD I+ V + ACAQLG+LE G W+H Y +K LL V+ ALI+MY+KC
Sbjct: 300 QSMLRCGLRPDRIAAVGAVSACAQLGALEQGRWLHSYLEKKKLLSDVVVQTALIDMYVKC 359
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
GC++ A +F+ M ER VV+W+ +I GL HG A+ LFH M+ V +D++ +G+L
Sbjct: 360 GCLDLAMLIFESMAERSVVTWNVMIVGLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGML 419
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
+AC H G +EGL F MK+D I+ K+EHYG LVDLLGRAGRLDQA + IE MPM+P
Sbjct: 420 TACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPT 479
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
++WGSLL++CR++S +E+A +++E L L +D+G YVLLSNIYA G W DV R+RKL
Sbjct: 480 PELWGSLLAACRSHSCVELAELSVERLADLGADDSGVYVLLSNIYADEGMWGDVLRIRKL 539
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSG 504
+ + M+K G S+IEV+ E+ EFV+G
Sbjct: 540 MSDEGMRKDIGRSVIEVDGEIHEFVNG 566
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 186/529 (35%), Positives = 299/529 (56%), Gaps = 15/529 (2%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQ----SNFLVTKMIDVCNSGGDLAYASLLF 69
FV +L SC E L ++IH+ I + L +N L+T M CN D A F
Sbjct: 283 FVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALIT-MYCKCNCIQD---ARETF 338
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAI--NLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
++ + +V ++AMI Y + +++ + R R G + P+K T ++K+C
Sbjct: 339 DRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREG--VFPNKVTFMSILKAC 396
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+ G+QIHA + K G +S + A+ ++Y KC + EA +VF +M ++++VAW
Sbjct: 397 SVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWA 456
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+L++ Y + G + A +F +M +VSW MI+GY G A+ ++ M++ G +P
Sbjct: 457 SLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQP 516
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D ++I+S+L AC L +LE G+ +H K L TV+ +LI MY KCG + +A +F
Sbjct: 517 DRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVF 576
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D++ RD V+W+ ++ G HG +A+ LF M + +VPPN+ITF ++SAC G
Sbjct: 577 DKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQ 636
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EG F M+ D ++ +HYGC+VDLLGRAGRL +A I+ MP +PD +W +LL +
Sbjct: 637 EGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGA 696
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
C+++ N+++A A H+L LEP + YV LSNIYA+ GRW+D +++RK++ K +KK
Sbjct: 697 CKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDR 756
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
G S IE++ + FV+ D P + I LE+L A D+ +
Sbjct: 757 GESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRF 805
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 212/445 (47%), Gaps = 69/445 (15%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+ IL++C N L + ++IHT + + + T +I + + G+++ A +F+++K
Sbjct: 182 FLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMK 241
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E NV + A+I+A + A LY++ML+ + I P+ T ++ SC
Sbjct: 242 ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ-----AGISPNAVTFVSLLNSCNTPEAL 296
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ G++IH+H+ + GL++ + NAL+ +Y KC+ + +A + F+ M+ RD+++W+ +I+GY
Sbjct: 297 NRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGY 356
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ SGY S E + +M+ G+ P++++ +
Sbjct: 357 AQ--------------------------SGYQDKESLDEVFQLLERMRREGVFPNKVTFM 390
Query: 254 SVLPACAQLGSLELGEWIH--------------------MYCDKNHLL-----------R 282
S+L AC+ G+LE G IH MY + +
Sbjct: 391 SILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK 450
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
V +L+ MYIKCG + A ++F +M R+VVSW+ +I G A G K L M+
Sbjct: 451 NVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMK 510
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
P+ +T I +L AC G L++ +++K +E L+ + + G
Sbjct: 511 VEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLG--LESDTVVATSLIGMYSKCGE 568
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLS 426
+ +A + +++ + D W ++L+
Sbjct: 569 VTEARTVFDKISNR-DTVAWNAMLA 592
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 188/415 (45%), Gaps = 46/415 (11%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
I++ C L K +H Q+ + L+ +L +I+ + GD+A +F+++ +
Sbjct: 84 IIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRD 143
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +++MI AY N+ A + +++M +D I P++ T ++K+C
Sbjct: 144 VVTWSSMIAAYAGNNHPAKAFDTFERM-KDAN----IEPNRITFLSILKACNNYSMLEKA 198
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
++IH V G+++ AL+ +Y KC
Sbjct: 199 REIHTVVKASGMETDVAVATALITMYSKC------------------------------- 227
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G++ A +F KM +VSWTA+I EA +++ +M GI P+ ++ VS+L
Sbjct: 228 GEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLL 287
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
+C +L G IH + + L V+ NALI MY KC CI A + FD+M +RDV+
Sbjct: 288 NSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVI 347
Query: 317 SWSTVIGGLANHGKAHK-----AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
SWS +I G A G K L M+R V PN +TF+ +L AC+ G +G
Sbjct: 348 SWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQ 407
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + E + ++ + G + +A + +M K + W SLL+
Sbjct: 408 IHAEISK-VGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK-NVVAWASLLT 460
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 31/257 (12%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
+L + T +I+ CA L GK +H + + GL N+L++ Y K ++
Sbjct: 74 LLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVE 133
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
+VF MT RD+V W+++I+ YA G H A+
Sbjct: 134 QVFRRMTLRDVVTWSSMIAAYA----------------------------GNNHP---AK 162
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
A D F +M+ IEP+ I+ +S+L AC LE IH + + + ALI
Sbjct: 163 AFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALIT 222
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
MY KCG I+ A ++F +M ER+VVSW+ +I A H K ++A L+ +M + + PN +T
Sbjct: 223 MYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVT 282
Query: 353 FIGLLSACAHTGFWNEG 369
F+ LL++C N G
Sbjct: 283 FVSLLNSCNTPEALNRG 299
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
G EA+ + ++ G+ + + ++ CA+L E G+ +H D+ L +
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
N+LI Y K G + Q+F +M RDVV+WS++I A + KA F M+ +
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
PN ITF+ +L AC + E ++ + +E + L+ + + G + A
Sbjct: 177 PNRITFLSILKACNNYSML-EKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
I ++M + + W +++ + + L A E +L
Sbjct: 236 IFQKMKER-NVVSWTAIIQANAQHRKLNEAFELYEKML 272
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 190/518 (36%), Positives = 305/518 (58%), Gaps = 23/518 (4%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+SC + L KIH QI+ SQ N+++ ++ + S G L A +F+ + P+ +
Sbjct: 33 VLKSCVSFRNLAKIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTV 92
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +I+ +T + +I L+K+M T + + + FT F++ +C G+QI
Sbjct: 93 WNQIIKGHTRSKTSKKSIELFKRM-----TLAGVEANGFTYSFLLSACVRSRLFREGEQI 147
Query: 140 HAHVCKFGLKSHSITENALLDLY-----GKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
H V G S+ L++LY G +L A +F+EM D ++V WN+L++GY
Sbjct: 148 HGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAGYV 207
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
R G AR +FD+MP + +WT M++G+ G AL +F QM+ G+E D++++V+
Sbjct: 208 RRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVA 267
Query: 255 VLPACAQLGSLELGEWIHMYCDKN----HLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
L ACA+LG L LG+WIH Y ++ HL + NALI MY CG ++ A ++F+++
Sbjct: 268 ALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEI 327
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEM---QRLKVPPNDITFIGLLSACAHTGFWN 367
+R+ VSWS++I G A G +AI +F M + +V P++ITFIG L+AC+H G +
Sbjct: 328 PQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLIS 387
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+G+ F SM + + +IEHYGC+VDLL RAG L +AL++IE MPMKP+ +WG+LLS
Sbjct: 388 DGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSG 447
Query: 428 CRTYSNLEIAVIAMEHL-LVLEPED--TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
CR + N EI +HL + P + G ++LL+N+YA GRW+D + +R+ + +K
Sbjct: 448 CRLHKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVK 507
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
K G S IE+N + F+ G++T KD+ + E+L
Sbjct: 508 KPSGRSWIEINGVLCSFMVGEETH---KDVNLIYEMLG 542
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 189/536 (35%), Positives = 304/536 (56%), Gaps = 40/536 (7%)
Query: 20 ILQSCENLIELKKIHTQIL-KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVF 78
I+ +C+ L LK IH ++L + ++ S F++ K++ + + G YA +F ++ +PN +
Sbjct: 8 IIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAY 67
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
L+ ++I Y N Y A +L+ QM R+P I FT+ V+K+ A L G+
Sbjct: 68 LWTSLIHGYVENRQYDEAFSLFIQMRREP-----ISVLNFTISSVLKALARLTRFKGGQA 122
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
++ + ++ N ++ YG D + A K F+ M +R++V+W ++I GY + G
Sbjct: 123 VYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGD 182
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA--------------------------- 231
M +A++LFD MP + SW M+SGY IG Y
Sbjct: 183 MAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYAR 242
Query: 232 -----EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI-HMYCDKNHLLRRTV 285
+AL++F + + I+PDE I+ ++ AC+QLG ++ E I H Y + LL
Sbjct: 243 NGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPS-LLSDLR 301
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+ +LI+MY KCG I +A Q+F+ +D++ +ST+I LANHG AI LF +MQR
Sbjct: 302 VFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRAN 361
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
+ P+ +TF+G+L+AC H G +EG YF M + I+ +HY C+VDLLGR G L++A
Sbjct: 362 IKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEA 421
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
N+I MP+ P + +WG+LL++CR + N+++A +A L +EP+++GNY+LLSNIYA
Sbjct: 422 YNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAA 481
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
GRW V+++R IR ++K G S IE+++ V EFV GD + I +L LL
Sbjct: 482 GRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLL 537
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 287/503 (57%), Gaps = 45/503 (8%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
S + ++ +H+ ++K + F+ +ID + G + A +F ++ E +V +N
Sbjct: 447 SAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNT 506
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+ A L+ +M P+K T+ +
Sbjct: 507 AMAAMVREGELAGVRKLFDEM-----------PEKDTVSW-------------------- 535
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
N +LD Y K E+ A ++F+ M +R++V+W+ ++SGY + G ++ A
Sbjct: 536 -------------NTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMA 582
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R++FDKMP +V+WT M+S G EA +F QM+ +E D ++VS+L ACA+
Sbjct: 583 RVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAES 642
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD-QMVERDVVSWSTV 321
GSL LG+ IH Y K +L R T +CNALI+M+ KCGC+N+A +FD + V++D VSW+++
Sbjct: 643 GSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSI 702
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
IGG A HG KA+ LF +M++ P+ +T I +LSAC H GF +EG +F +M+RD+
Sbjct: 703 IGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYG 762
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
I +IEHYGC++DLLGR G + +A+++I+ MP +P+ IWGSLLS+CR + N+E A IA+
Sbjct: 763 IMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAV 822
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
L L+P + GNY +LSNIYA+ G+W D+++ R ++ +KT G S +E+N EF
Sbjct: 823 NELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEF 882
Query: 502 VSGDDTKPFLKDIFWLLELLALH 524
GD I +++ L+ H
Sbjct: 883 TVGDRKHQDSDQISEMVDRLSSH 905
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 180/480 (37%), Positives = 296/480 (61%), Gaps = 8/480 (1%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F IL++C L E +++H I K L F+ +I + + G+L YA +F ++
Sbjct: 90 FPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMV 149
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +N++I Y+ + + + L+K M + + DK T+ V+ +C L
Sbjct: 150 VKDVVSWNSLICGYSQCNRFKDILALFKLMQNEG-----VKADKVTMIKVVSACTRLGDY 204
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S+ + ++ + ++ N L+D +G+ +L A KVF M R+IV N +I+ Y
Sbjct: 205 SMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAY 264
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ + AR +FD++P ++SW++MISGY+ +++AL++FRQMQ ++PD I I
Sbjct: 265 AKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIA 324
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV+ +CA LG+L+LG+W+H Y +N++ T++ N+LI+MY+KCG +A Q+F +M E+
Sbjct: 325 SVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEK 384
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +SW+++I GLAN+G ++++LF M PN +TF+G+L ACA+ EGL +F
Sbjct: 385 DTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHF 444
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SMKR + +E +++HYGC+VDLLGRAG+L++AL I EMP+ PD +W LL SC T+ +
Sbjct: 445 ESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGD 504
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+ IA I + L LEP ++GNY LLSN YA RW + +R+ + ++K+PGCS +E
Sbjct: 505 VAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 564
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 192/369 (52%), Gaps = 15/369 (4%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
DL +A +F Q++ P FL+N +IR + AI YK+ G ++PD T
Sbjct: 36 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKA-----QGGGMVPDNLTF 90
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PF++K+CA + + G+Q+H H+ K GL S N+L+ LY C L A VF+EM
Sbjct: 91 PFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVV 150
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDV 236
+D+V+WN+LI GY++ + K LF M + V+ ++S T +G Y+ A +
Sbjct: 151 KDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYM 210
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
R ++ IE D +++ + G L+ E + N +R V NA+I Y K
Sbjct: 211 VRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFF----NMKVRNIVTMNAMIAAYAK 266
Query: 297 CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
I A ++FDQ+ ++D++SWS++I G + A+ +F +MQR KV P+ I +
Sbjct: 267 GQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASV 326
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
+S+CAH G + G + ++R+ +I+ L+D+ + G +AL + +EM K
Sbjct: 327 VSSCAHLGALDLGKWVHEYVRRN-NIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEK- 384
Query: 417 DAKIWGSLL 425
D W S++
Sbjct: 385 DTLSWNSII 393
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 175/484 (36%), Positives = 276/484 (57%), Gaps = 9/484 (1%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC-NSGGDLAYASLLFKQVKEPNVFLYNA 82
C ++ L+++H ++K L++ ++ + C G D+ YA L + PN F++N
Sbjct: 44 CVSMAHLRQLHAALVKSGLAKDPIAASRAVAFCAGPGRDVLYAERLVRHHPRPNSFMWNT 103
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+IRA ++ A+ L+ ML P PD+ + P ++ + A L G+ +H
Sbjct: 104 VIRALSDGARPDAAVALFVDMLSSPTP-----PDRRSFPSLLAAYARLGRAGDGEALHGM 158
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
K GL + NA + +Y C EA +F + + D+VA N++I AR G++ +A
Sbjct: 159 ALKLGLAGDAYVRNATIAMYASCGRADEALALFGQCPELDVVACNSVIVALARAGRVDEA 218
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R +FD MP T+ +W+AM+S Y +EAL +F MQ G+EP+ +VSVL CA L
Sbjct: 219 RSVFDAMPERTVATWSAMVSAYARAARCSEALALFSAMQADGMEPNANVLVSVLGCCASL 278
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV---SWS 319
G+L G W+H Y D++ + ++ AL++MY KCG ++ A Q+FD + + SW+
Sbjct: 279 GALVQGAWVHEYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGLAKLSSWN 338
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+++ GLA HG+ +A+ LF E++ + P+++TFI +L+A H+G +E F SM +
Sbjct: 339 SMMQGLAVHGQWREAVALFSELKSYGLSPDNVTFIAVLTAYGHSGMPDEAQAAFASMSSE 398
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
H +E IEHYGCLVD L RAGRL +A + I MPM PDA IWG+LLS CR + + E+
Sbjct: 399 HGVEPGIEHYGCLVDALARAGRLREAEDAIRAMPMAPDAAIWGALLSGCRLHGDAELGAR 458
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A + +P D+G YVL +++ A+ G + +R +R + K PG S+IEVN V
Sbjct: 459 AAREAVRCDPRDSGAYVLAASVLARGGDPGRGAGIRGRMREAGVGKVPGSSMIEVNGVVH 518
Query: 500 EFVS 503
EFVS
Sbjct: 519 EFVS 522
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 300/521 (57%), Gaps = 9/521 (1%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLS----QSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
F +L++C L E + +L +LS F+V + +A A LF
Sbjct: 123 FPFLLKACARLQE-RNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGS 181
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
++ +N +I Y + A+ ++ +M+ D + PD+ T+ V+ A L
Sbjct: 182 HVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGD----GAVTPDEVTMIGVVSGSAQLRD 237
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
LG+++H +V G++ N ++D+Y KC +L A VFE + + IV+W +I G
Sbjct: 238 LELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVG 297
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA+ G M AR +FD+MP + W A+++GY EAL +F MQ +EPD+I++
Sbjct: 298 YAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITM 357
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V++L AC+QLG+LE+G W+H Y D+ + ++ L++MY KCG I +A ++F ++ E
Sbjct: 358 VNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPE 417
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
++ ++W+ +I GLANHG A AI F M L + P++ITFIG+LSAC H G EG +
Sbjct: 418 KNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEF 477
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F M +H+E K++HY C+VDLLGRAG LD+A +++ MPM+PDA +WG+L +CR +
Sbjct: 478 FSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHG 537
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N+ + A L+ L+P D+G YVLL+N+YA+ + ++R ++R ++K PGCS I
Sbjct: 538 NITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCI 597
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
E+N V EF+ D + + I+ L + L + ++ID
Sbjct: 598 ELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQIEHTANMID 638
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 193/409 (47%), Gaps = 76/409 (18%)
Query: 80 YNAMIRAY---TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
YNA +RA T+ L + LY +LR R PD T PF++K+CA L + G
Sbjct: 86 YNAALRALSLCTDRGLVTRCLPLYCSLLRSAR------PDHLTFPFLLKACARLQERNYG 139
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ +V G + NA + C + EA K+F+ RD+V+WN LI GY R
Sbjct: 140 NAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRR 199
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G ++A +F +M +G A + PDE++++ V+
Sbjct: 200 GVPREALEMFWRM-----------------VGDGA-------------VTPDEVTMIGVV 229
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKC------------------ 297
AQL LELG +H Y + +H +R TV + N +++MYIKC
Sbjct: 230 SGSAQLRDLELGRRLHGYVE-SHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTI 288
Query: 298 -------------GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
G ++ A ++FD+M ERDV W+ ++ G + +A+ LFH+MQ
Sbjct: 289 VSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEA 348
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
V P+DIT + LLSAC+ G G+ + R + + LVD+ + G +++
Sbjct: 349 MVEPDDITMVNLLSACSQLGALEMGMWVHHYIDR-RRVSLSVMLGTNLVDMYSKCGNIEK 407
Query: 405 ALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL--LVLEPED 451
A+ + +E+P K +A W +++S + + ++A+ + + L L+P++
Sbjct: 408 AIRVFKEIPEK-NALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDE 455
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 293/512 (57%), Gaps = 14/512 (2%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
DR +L C + ++H ++ + Q + ++ + G L A L ++ +
Sbjct: 31 DRAAALLAGCASARRASELHAAAVRAGVDQDKAVDFRLQRAYAASGRLDLAVALLRRTPD 90
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P Y + I A+++ L+ A+ L +ML +LP TL + +C GL +
Sbjct: 91 PTAVFYTSAIHAHSSRGLHHAALALLSEML----LSHGLLPTAHTLSASLPACGGL---A 143
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLISGY 193
+G+ +H + K L ALL +Y + + A +F+ M D +V+ +++ Y
Sbjct: 144 VGRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCY 203
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A++G + AR LFD +P ++ W AM+ GYT G +EAL +FR+M G+EPDE+S+V
Sbjct: 204 AKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVV 263
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLR---RTVICNALIEMYIKCGCINQASQLFDQM 310
L A AQLG+ E G W+H + + R + ALI+MY KCG + A +F +
Sbjct: 264 LALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDL 323
Query: 311 V--ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+RD+V+W+ ++ G A HG + +A+ F +++ + P DITFIG+L+AC+H+G +E
Sbjct: 324 GAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDE 383
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP-MKPDAKIWGSLLSS 427
G F SM ++ IE K+EHYGC+VDLLGRAGR+++A +++ M KPDA +W SLL++
Sbjct: 384 GRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAA 443
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR + N+E+ +HL+ ++G YVLLSN+YA G W +V R+R ++R+ ++K P
Sbjct: 444 CRLHKNMELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKEP 503
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
GCS +EV V EFV+GD + P +I+ LE
Sbjct: 504 GCSAVEVGRRVVEFVAGDRSHPRAAEIYAKLE 535
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 296/499 (59%), Gaps = 5/499 (1%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
L S + + E +++H +++ + S F+ ++ + G + +F ++++P + L+
Sbjct: 101 LVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLW 160
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
+IRAY A+ L++ M T PD + V+ +C L + K +H
Sbjct: 161 TLIIRAYVCVTFPEKALELFRTMREVGLT-----PDMVAVSTVVSACGLLGDLGVAKAMH 215
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
+ K G++ + + L+ YG+C L A++ F+E ++IV WN +I ++
Sbjct: 216 CFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLE 275
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
+ LF MP +VSW +MI G+ IG Y EAL F +M+ G+ P+ ++++S L ACA
Sbjct: 276 LGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACA 335
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
G+L+ G WIH Y DKN + R + ++LI+MY KCG I++A Q+F++ RD+ +W++
Sbjct: 336 SHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTS 395
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
++ GLA HG+ KA+H F +M+ +V P+D+T +G+LSACAH G ++G YF SM++
Sbjct: 396 IVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVF 455
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
+ K+EHYG +VDLLGR G L +A ++I MPM+ + IWG+ LS+CR ++N+E+ +A
Sbjct: 456 GLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVA 515
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQE 500
LL L P D V+LSN+YA+ +W+ +RK I+ K +KK+PGCS IEVN V
Sbjct: 516 ARRLLGLXPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHG 575
Query: 501 FVSGDDTKPFLKDIFWLLE 519
F+ GD++ P +I ++E
Sbjct: 576 FLVGDNSHPCYTEINSMVE 594
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 174/401 (43%), Gaps = 81/401 (20%)
Query: 76 NVFLYNAMIRAYTNNHLYGLAINL--YKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
NVF++N MIR N L L Y Q LR + + P+ T +++K+
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLR-----AGLRPNGHTFMYLLKALVSGQEV 107
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+++HA V + G ALL Y C + + +VF+EM +V W
Sbjct: 108 KEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLW------- 160
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
T +I Y + +AL++FR M+ VG+ PD +++
Sbjct: 161 ------------------------TLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVS 196
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA---------- 303
+V+ AC LG L + + +H + +K+ + + + LI Y +CG ++ A
Sbjct: 197 TVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMK 256
Query: 304 ---------------------SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
QLF M +RDVVSW+++IGG A G+ +A+ FHEM+
Sbjct: 257 NIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEME 316
Query: 343 RLKVPPNDITFIGLLSACAH-----TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
V PN +T + LSACA TG W + + M RD ++ L+D+
Sbjct: 317 FSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSS------LIDMYS 370
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+ G +D+A+ I EE + D W S++ + E A+
Sbjct: 371 KCGDIDKAVQIFEE-STRRDLFTWTSIVCGLAMHGRGEKAL 410
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 96/233 (41%), Gaps = 4/233 (1%)
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ--MVGIEPDEISIVSVLPACAQLGS 264
++ + W MI G + MQ G+ P+ + + +L A
Sbjct: 47 SRLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQE 106
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
++ GE +H + + AL+ Y+ CG + + Q+FD+M + +V W+ +I
Sbjct: 107 VKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRA 166
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
KA+ LF M+ + + P+ + ++SAC G +++ IE
Sbjct: 167 YVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKS-GIEV 225
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
L+ G G LD A +E PMK + +W +++ ++NLE+
Sbjct: 226 DAFVSSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELG 277
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 188/504 (37%), Positives = 297/504 (58%), Gaps = 45/504 (8%)
Query: 18 VPILQSC-ENLIELKKIHTQILKYLLSQSN-----FLVTKMIDVCNSGGDLAYASLLFKQ 71
+ +L SC + + ++IH +++ + +N +L+ ++ C+ ++YA +F Q
Sbjct: 43 IALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSP---MSYAHQIFSQ 99
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ PN+F +N MIR Y + A+ LY+QM S I PD T PF++K+ A L+
Sbjct: 100 IQNPNIFTWNTMIRGYAESENPMPALELYRQM-----HVSCIEPDTHTYPFLLKAIAKLM 154
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
G+++H+ + G +S +N L+ +Y C
Sbjct: 155 DVREGEKVHSIAIRNGFESLVFVQNTLVHMYAAC-------------------------- 188
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G + A LF+ M +V+W ++I+GY G EAL +FR+M + G+EPD +
Sbjct: 189 -----GHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFT 243
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VS+L ACA+LG+L LG H+Y K L NAL+++Y KCG I QA ++FD+M
Sbjct: 244 MVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEME 303
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E+ VVSW+++I GLA +G +A+ LF E++R + P++ITF+G+L AC+H G +EG
Sbjct: 304 EKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFD 363
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
YF MK ++ I KIEHYGC+VDLLGRAG + QA I+ MPM+P+A +W +LL +C +
Sbjct: 364 YFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIH 423
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
+L + +A LL LEP+ +G+YVLLSN+YA RW DV ++R+ + + +KKTPG SL
Sbjct: 424 GHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSL 483
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIF 515
+E+ N + EFV GD + P ++I+
Sbjct: 484 VELRNRLHEFVMGDRSHPQTEEIY 507
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 176/509 (34%), Positives = 300/509 (58%), Gaps = 10/509 (1%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKE 74
+ +L C++++ELKK+H + Y LS + K++ ++ GD+ Y+ +F Q+
Sbjct: 17 LLSLLDKCKSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFSQISS 76
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P +F +N +IR Y+N+ +++++ +MLR + PD T PF++K+ A L
Sbjct: 77 PTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHG-----VAPDYLTYPFLVKASARLSKQK 131
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G +HA + K G +S +N+L+ +Y C ++ AHKVFE M +++V+WN+++ GYA
Sbjct: 132 SGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYA 191
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+ G+M A+ +F+ M + SW++ I GY G Y EA+ VF +M+ VG + +E+++VS
Sbjct: 192 KCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM--VE 312
VL ACA LG+L+ G +H Y N L V+ +L++MY KCG I +A +F + +
Sbjct: 252 VLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQ 311
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
DV W+ +IGGLA HG +++ LF EMQ + ++IT++ LL+ACAH G E +
Sbjct: 312 TDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNF 371
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F+S+ + + EHY C+VD+L RAG+L A I ++P++P A + G++ S C +
Sbjct: 372 FESLVK-RGMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINHR 430
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N ++A L+ L+P + G Y+ LSN+YA RW+D MR+ + + +KK+PG S +
Sbjct: 431 NFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFV 490
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
E++ F++ D T P + + +L +
Sbjct: 491 EISEIHHRFIAHDKTHPDSDETYSMLHFV 519
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 183/501 (36%), Positives = 288/501 (57%), Gaps = 39/501 (7%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C + L+ ++H ILK + F+ +I + + G + A +F +
Sbjct: 124 FSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMP 183
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E ++ +N+M+ YT N L+ + L++++L I D T+ V+ +C L
Sbjct: 184 ERSIVAWNSMLSGYTKNGLWDEVVKLFRKILE-----LRIEFDDVTMISVLMACGRLANL 238
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+G+ I ++ GL+ ++ +L+D+Y KC
Sbjct: 239 EIGELIGEYIVSKGLRRNNTLTTSLIDMYAKC---------------------------- 270
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
GQ+ AR LFD+M +V+W+AMISGY EAL++F +MQ + P+E+++V
Sbjct: 271 ---GQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMV 327
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL +CA LG+ E G+W+H Y K + + LI+ Y KCG I+++ ++F +M +
Sbjct: 328 SVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK 387
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+V +W+ +I GLAN+G+ A+ F M V PND+TFIG+LSAC+H ++G F
Sbjct: 388 NVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLF 447
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM+RD IE +IEHYGC+VD+LGRAG L++A I+ MP P+A +W +LL+SCR + N
Sbjct: 448 NSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKN 507
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A ++EH+ LEP +G+Y+LLSN YA GR ED R+R LI+ K +KK PGCSLIE
Sbjct: 508 IEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIE 567
Query: 494 VNNEVQEFVSGDDTKPFLKDI 514
++ V EF S D K+I
Sbjct: 568 LDGVVHEFFSEDGEHKHSKEI 588
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 212/417 (50%), Gaps = 58/417 (13%)
Query: 20 ILQSCENLIELKKIHTQILKY-----------LLSQSNFLVTKMIDVCNSGGDLAYASLL 68
ILQ C+ +L+++H +LK +L + L+ ID YA +
Sbjct: 27 ILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTID---------YALSI 77
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F + +P YN MIR A+ L+K+M + DKFT V+K+C+
Sbjct: 78 FNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKS-----VQHDKFTFSSVLKACS 132
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
+ G+Q+HA + K G KS+ EN L+ +Y C
Sbjct: 133 RMKALREGEQVHALILKSGFKSNEFVENTLIQMYANC----------------------- 169
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
GQ+ AR +FD MP +IV+W +M+SGYT G + E + +FR++ + IE D
Sbjct: 170 --------GQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFD 221
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+++++SVL AC +L +LE+GE I Y L R + +LI+MY KCG ++ A +LFD
Sbjct: 222 DVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFD 281
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M +RDVV+WS +I G A + +A++LFHEMQ+ V PN++T + +L +CA G +
Sbjct: 282 EMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYET 341
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
G +K+ ++ + L+D + G +D+++ + +EM K + W +L+
Sbjct: 342 GKWVHFYIKKK-KMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK-NVFTWTALI 396
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 294/509 (57%), Gaps = 46/509 (9%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMID---VCNSGGDLAYASLLFK 70
+ +LQSC + + K++H Q+ + TK+++ VC+S L+ A LLF
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDS---LSSARLLFD 134
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + N+FL+N +IR Y N Y A+ LY QM ++PD FT PFV+K+CA L
Sbjct: 135 RIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF-----DYGLVPDNFTFPFVLKACAAL 189
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G++IH HV + G + AL+D+Y
Sbjct: 190 SAIEHGREIHEHVVQTGWEKDVFVGAALIDMY---------------------------- 221
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
A+ G + AR +FDK+ V W +M++ Y+ G L + +M + G+ P E
Sbjct: 222 ---AKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEA 278
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++V+ + A A +L G +H + + AL++MY KCG + A LF+++
Sbjct: 279 TLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERL 338
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+ VVSW+ +I G A HG A +A+ LF EM R+ P+ ITF+G+LSAC+H G EG
Sbjct: 339 GVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEGW 397
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
M+F++M RD+ I+ ++HY C+VDLLG +GRLD+A N+I +M + PD+ +WG+LL+SC+
Sbjct: 398 MFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKI 457
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
++N+E+ IA+E L+ LEP+D GNYV+LSNIYA+ G+WE V+++RKL+ + +KK+ CS
Sbjct: 458 HANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACS 517
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
IEV N+V F+SGD + P +I+ LE
Sbjct: 518 WIEVKNKVHAFLSGDTSHPLSDEIYSELE 546
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 190/518 (36%), Positives = 305/518 (58%), Gaps = 23/518 (4%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+SC + L K H QI+ SQ N+++ ++ + S G L A +F+ + P+ +
Sbjct: 33 VLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTV 92
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +I+ +T + +I L+K+M T + + + FT F++ +C G+QI
Sbjct: 93 WNQIIKGHTRSKTSKKSIELFKRM-----TLAGVEANGFTYSFLLSACVRSRLFREGEQI 147
Query: 140 HAHVCKFGLKSHSITENALLDLY-----GKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
H V G S+ L++LY G +L A +F+EM D ++V WN+L++GY
Sbjct: 148 HGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSLLAGYV 207
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
R G AR +FD+MP + +WT M++G+ G AL +F QM+ G+E D++++V+
Sbjct: 208 RRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVA 267
Query: 255 VLPACAQLGSLELGEWIHMYCDKN----HLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
L ACA+LG L LG+WIH Y ++ HL + NALI MY CG ++ A +LF+++
Sbjct: 268 ALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEI 327
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEM---QRLKVPPNDITFIGLLSACAHTGFWN 367
+R+ VSWS++I G A G +AI +F M + +V P++ITFIG L+AC+H G +
Sbjct: 328 PQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLIS 387
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+G+ F SM + + +IEHYGC+VDLL RAG L +AL++IE MPMKP+ +WG+LLS
Sbjct: 388 DGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSG 447
Query: 428 CRTYSNLEIAVIAMEHL-LVLEPED--TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
CR + N EI +HL ++P + G ++LL+N+YA GRW+D + +R+ + +K
Sbjct: 448 CRLHKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVK 507
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
K G S IE+N + F+ G++T KD+ + E+L
Sbjct: 508 KPSGRSWIEINGVLCSFMVGEETH---KDVNLIYEMLG 542
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 188/495 (37%), Positives = 295/495 (59%), Gaps = 41/495 (8%)
Query: 28 IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
I + I T ++ + + SN L+ ++ VC S D+ +F + ++ + +I+A+
Sbjct: 132 IHARSIKTGMVGFNVYVSNTLM-RLYSVCGSIHDVQK---VFDECPHRDLVSWTTLIQAF 187
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF- 146
T LY A+ + +M D R + D TL V+ +C+ L +LG+++H+++ +
Sbjct: 188 TKAGLYSRAVEAFMEMC-DLR----LRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYI 242
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
+K+ NALLD+Y KCD+L A+KV F
Sbjct: 243 DMKADVFVGNALLDMYLKCDDLNSAYKV-------------------------------F 271
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
D+MP +V+W AMISG + G Y EALD FR MQ G++PDE+++V VL +CA LG LE
Sbjct: 272 DEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLE 331
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
+G+W+H Y +NH+L + NAL++MY KCG I++A ++F+ M RDV S++ +I GLA
Sbjct: 332 IGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLA 391
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
HG+A+ A +F EM R+ + PN++TF+GLL AC+H G EG YF M + + +
Sbjct: 392 LHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQA 451
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
EHYGC++DLLGRAG + +A II +M ++PD G+LL +CR + N++I M+ L
Sbjct: 452 EHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTE 511
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
L+P++ G Y+L++N+Y+ RW+D ++RK +++K M+KTPGCSLIEV+ V EF GD
Sbjct: 512 LDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDK 571
Query: 507 TKPFLKDIFWLLELL 521
+ P K I + L+
Sbjct: 572 SHPRSKVIIANINLI 586
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 204/408 (50%), Gaps = 47/408 (11%)
Query: 17 FVPILQSCENLIELKKIHTQILKY-LLSQSNFLVTKMI---DVCNSGGDLAY-ASLLFKQ 71
F L SC+++ LK+IH +K LS N L+ K+I +S DL Y S+L
Sbjct: 9 FSHSLNSCKSISHLKQIHGVAIKTPSLSLPN-LIPKLIFLSSSSSSSPDLFYIRSILLTH 67
Query: 72 VKEPN--VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ + L NA+IR+ + N +INL + + PD FT+P V+K+ A
Sbjct: 68 SHDAQFCLSLCNAIIRSISRN-----SINLSPMEFLNEMLVVGLEPDGFTIPLVLKALAL 122
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
+ G+QIHA K G+ ++ N L+ LY C + + KV
Sbjct: 123 IQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKV-------------- 168
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
FD+ P+ +VSWT +I +T G Y+ A++ F +M + + D
Sbjct: 169 -----------------FDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRAD 211
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLF 307
++V VL AC+ LG L LG+ +H Y ++ V + NAL++MY+KC +N A ++F
Sbjct: 212 GRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVF 271
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D+M ++VV+W+ +I GLA G+ +A+ F MQ V P+++T +G+L++CA+ G
Sbjct: 272 DEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLE 331
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
G M+R+H + K L+D+ + G +D+A + E M +
Sbjct: 332 IGKWVHAYMRRNHILADKFVG-NALLDMYAKCGSIDEAFRVFESMKRR 378
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 172/367 (46%), Gaps = 43/367 (11%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSN-FLVTKMIDVCNSGGDLAYASLLFKQV 72
V +L +C NL +L +K+H+ I Y+ +++ F+ ++D+ DL A +F ++
Sbjct: 215 LVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEM 274
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
NV +NAMI Y A++ ++ M++D + PD+ TL V+ SCA L
Sbjct: 275 PVKNVVTWNAMISGLAYQGRYREALDTFR-MMQDKG----VKPDEVTLVGVLNSCANLGV 329
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+GK +HA++ + + + NALLD+Y KC + EA +VFE M RD+ ++ +I G
Sbjct: 330 LEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFG 389
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
A G+ +W A VF +M VGIEP+E++
Sbjct: 390 LALHGE----------------ANW---------------AFQVFSEMFRVGIEPNEVTF 418
Query: 253 VSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM- 310
+ +L AC+ G + G ++ DK L + +I++ + G + +A ++ +M
Sbjct: 419 LGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKME 478
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+ DV + ++G HG + ++ L P + T+I + + + W + L
Sbjct: 479 IRPDVFACGALLGACRIHGNVDIGESVMQKLTELD-PDEEGTYILMTNLYSSVHRWKDAL 537
Query: 371 MYFDSMK 377
+MK
Sbjct: 538 KIRKTMK 544
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 290/510 (56%), Gaps = 48/510 (9%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
S + L+ +H+ ++K + ++ +ID + G + AS +F+++ +V +N+
Sbjct: 131 SSAGVAPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNS 190
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+ A A ++ +ML
Sbjct: 191 AMAAMVRQGEVEGARRMFDEML-------------------------------------- 212
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
+ +++ N LLD Y K ++ EA K+F+ M +R++V+W+ ++SGY + G M+ A
Sbjct: 213 ------EKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMA 266
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R++FDKMP +V+WT M+S G EA +F QM+ +E D ++VS+L ACA+
Sbjct: 267 RVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAACAES 326
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD-QMVERDVVSWSTV 321
GSL LG+ IH Y L R T +CNALI+M+ KCGCIN+A +FD ++VE+D VSW+T+
Sbjct: 327 GSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTI 386
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
IGG A HG KA+ F +M+ P+ +T I +LSAC H GF EG YF +M+RD+
Sbjct: 387 IGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANMERDYG 446
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
+ +IEHYGC++DLLGR G + +A+++I+ MP P+ IWGSLLS+CR + N+E A IA+
Sbjct: 447 VVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAV 506
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
L L+P + GNY +LS+IYA+ G+W D+++ R ++ +K+ G S IE++ EF
Sbjct: 507 NELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGSSWIELDEAFHEF 566
Query: 502 VSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
GD P I +++ L+ H AKDV
Sbjct: 567 TVGDRKHPDSDQISEMVDRLSSH---AKDV 593
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 196/524 (37%), Positives = 298/524 (56%), Gaps = 34/524 (6%)
Query: 14 EDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F L +C L++L ++H + K S ++ + +ID+ + G +A A +F
Sbjct: 147 EYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFS 206
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ E N+ +N++I Y N A+ ++ +M+ S + PD+ TL V+ +CA L
Sbjct: 207 GMIERNLVTWNSLITCYEQNGPASEALEVFVRMM-----DSGLEPDEVTLASVVSACASL 261
Query: 131 LCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
G QIHA V K + + NAL+D+Y KC ++ EA +VF+ M+ R++V+ ++
Sbjct: 262 CALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSM 321
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+SGYAR +K AR +F KM +VSW A+I+GYT G EAL +FR ++ I
Sbjct: 322 VSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESI---- 377
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
W Y N L + N+LI+MY+KCG I S++F++
Sbjct: 378 --------------------WPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEK 417
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M ERD VSW+ +I G A +G +A+ +F +M P+ +T IG+L AC+H G EG
Sbjct: 418 MKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEG 477
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF SM+ I K +HY C+VDLLGRAG L++A N+IE MP+ PDA +WGSLL++C+
Sbjct: 478 RHYFFSMEEHGLIPLK-DHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACK 536
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ N+E+ A E LL ++P ++G YVLLSN+YA+ GRW DV R+RKL+R + + K PGC
Sbjct: 537 VHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGC 596
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
S IEV + V F+ D + P K I+ +L++L R + D
Sbjct: 597 SWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 640
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 179/375 (47%), Gaps = 4/375 (1%)
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
L LP+ ++ SC + +HA + +N L+D+YGKCD L +A
Sbjct: 10 LYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDA 69
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
K+F+ M R+ WN+LIS + G + +A LF MP SW +M+SG+ +
Sbjct: 70 RKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFE 129
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
E+L+ F +M +E S S L ACA L L +G +H K+ + +ALI
Sbjct: 130 ESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALI 189
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
+MY KCG + A ++F M+ER++V+W+++I +G A +A+ +F M + P+++
Sbjct: 190 DMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEV 249
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T ++SACA EGL + + + + LVD+ + ++++A + +
Sbjct: 250 TLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDR 309
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
M ++ S S Y+ A + + ++ L Y ++G E+
Sbjct: 310 MSIRNVV----SETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365
Query: 472 SRMRKLIRSKSMKKT 486
R+ +L++ +S+ T
Sbjct: 366 LRLFRLLKRESIWPT 380
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 204/449 (45%), Gaps = 76/449 (16%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L SC + + +H +IL S F+ ++IDV L A LF ++
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR------DPRTGSLILPDKF--TLPFVIK 125
+ N F +N++I T + A L+ M + D+F +L + +K
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 126 ------------------SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
+CAGL+ ++G Q+HA V K + +AL+D+Y KC
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+ A +VF M +R++V WN+LI+ Y + G
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPA---------------------------- 229
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT-VI 286
+EAL+VF +M G+EPDE+++ SV+ ACA L +L+ G IH K + R V+
Sbjct: 230 ---SEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVL 286
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
NAL++MY KC +N+A ++FD+M R+VVS ++++ G A A +F +M + V
Sbjct: 287 GNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV 346
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD-----HH-----IEHKIEHYGCLVDLL 396
+++ L++ G E L F +KR+ H+ ++ I L+D+
Sbjct: 347 ----VSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMY 402
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ G ++ + E+M + D W +++
Sbjct: 403 MKCGSIEDGSRVFEKMKER-DCVSWNAII 430
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 188/495 (37%), Positives = 285/495 (57%), Gaps = 7/495 (1%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLF-KQVKEPNVFLYNAMIR 85
+ K+ HTQ++ L+ + +I + GD+ YA LL + P VFL+N IR
Sbjct: 3 QFKEAHTQLIINGLTHPPPSLRPIISFSALDPSGDIDYALLLLLRTSTPPTVFLFNTTIR 62
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLIL-PDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
++ G +L +L R G L L P+ FT F+ + C+ + LG+Q H V
Sbjct: 63 GFSRARRPG---SLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVI 119
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
K + N+++ Y C L +A VF+E ++ D+V+WN++I G R G + +A
Sbjct: 120 KNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALS 179
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
LF KM +SW MISGY G EAL +FR+MQM+ EP+ +VSVL AC+QLG+
Sbjct: 180 LFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGA 239
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
L+ G W+H Y K + +++ ALI+MY KCG I+ A Q F +RDV +++ I G
Sbjct: 240 LDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISG 299
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA +G + +A+ LF +M+ + P+ +++I +L AC+H G+ +G YF SM H I
Sbjct: 300 LAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRP 359
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+++HY C+VDLLGRAG L++A + MP+KPD IWG+LL +CR Y N E+ L
Sbjct: 360 ELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLL 419
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
+ + G Y+LLSNIYA+ + ED ++RK +R + + + PGCSLIEV V EF SG
Sbjct: 420 VESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFSG 479
Query: 505 DDTKPFLKDIFWLLE 519
D + ++I+ + E
Sbjct: 480 DRSHEKTEEIYLMWE 494
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 171/411 (41%), Positives = 259/411 (63%), Gaps = 5/411 (1%)
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
R G+L PD ++ PFV+K+CA L G++IH+ K G+ +NAL+ + C
Sbjct: 3 RNGTL--PDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGA 60
Query: 168 LIEAHKVFEEMTD--RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
+ A VF+ + RD+V+WN++ISGY + + + A +FD++P+ V WT+MI+GY
Sbjct: 61 VEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYA 120
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
+ EA+++FR+MQ+ G D +I VL AC G+L G WIH+YC++N +
Sbjct: 121 QSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLN 180
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
NALI MY KCG I +A ++F + + D+ SWS VI GLA +G++ KA+HLF +M+ +
Sbjct: 181 ARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMIS 240
Query: 346 -VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
+ PN+ITF+G+L AC H GF ++GL YF++M + +++ IEHYGC+VDLLGRA L +
Sbjct: 241 DIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVE 300
Query: 405 ALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAK 464
A I +P++PD IW SLL +CR + N+E+A A + + LEP G VLLSN+YA
Sbjct: 301 AEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYAS 360
Query: 465 HGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
RW DV R+RK + ++ +KK PGCS +E++ V E D + P + I+
Sbjct: 361 ASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIY 411
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
+I + + GD+ A +F + +P++F ++A+I N A++L+ QM S
Sbjct: 185 LIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQM----EMIS 240
Query: 112 LILPDKFTLPFVIKSC--AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I P++ T V+ +C G + L +A + L ++DL G+ + L+
Sbjct: 241 DIRPNEITFLGVLCACNHGGFVDKGL-YYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLV 299
Query: 170 EAHKVFEEMT-DRDIVAWNNLI 190
EA K + D+V W +L+
Sbjct: 300 EAEKFIRTLPIQPDVVIWRSLL 321
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 291/521 (55%), Gaps = 40/521 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSGGDLAYASLLFKQVKEPNV 77
+L +C +L LK++H + K L + K++ + L YA LF P+V
Sbjct: 11 LLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDV 70
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP-DKFTLPFVIKSCAGLLCPSLG 136
F++N +IR + ++ + +M R L P D F+ F++K+ A G
Sbjct: 71 FMHNTLIRGLAESDTPQNSLITFVEMRR-----RLTAPLDSFSFAFLLKAAASYRSLESG 125
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
Q+H GL +H L+ +Y +C + A KVFEEM + ++VAWN +++ R
Sbjct: 126 IQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRC 185
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYT------------------------------- 225
G +K A M+F++MP+ + SW M++GYT
Sbjct: 186 GDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFA 245
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
H G + EA FR++Q VG+ P+E+S+ L ACA G++E G+ +H + +K+ L
Sbjct: 246 HNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVS 305
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
+ NAL++ Y KCG + A +F++M E R +VSW+++I GLA HG +AI LFHEM+
Sbjct: 306 VNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEES 365
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
+ P+ I FI +L AC+H G +G YF MK ++IE IEHYGC+VDL GRAG+LD+
Sbjct: 366 GIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDK 425
Query: 405 ALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAK 464
A I MP+ P A IW +LL +C + N+++A E L L+P ++G++VLLSNIYA
Sbjct: 426 AYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAV 485
Query: 465 HGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
G+W+DV+ +R+ + + M KTPG S+IEV+ + FV+G+
Sbjct: 486 AGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGE 526
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 318/578 (55%), Gaps = 58/578 (10%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILK--YLLSQSNFLVTKMIDVCNSGGDLAYA 65
L++ L + +LQ C +L LK IH+ + +LL +FL ++I + + GDL A
Sbjct: 19 LALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFL-ARLIILYSKLGDLHSA 77
Query: 66 SLLFKQ--------VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
LF + PN FL N M+RAY N AI+LY M R G + +
Sbjct: 78 RTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM---QRMGVGV--NN 132
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
FT PFV+K CA L G+ +H V + G S E AL+D+Y KC E+ +AH+VF+
Sbjct: 133 FTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDR 192
Query: 178 MTDRDIVAWNNLISGYAR--------------------------------LGQM------ 199
M RD+V W +I+ Y + +GQ+
Sbjct: 193 MLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMA 252
Query: 200 -KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+AR++FD+M +SW +M+SGYT G +AL +F QMQ +P+ ++ + ++ A
Sbjct: 253 ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSA 312
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD--QMVERDVV 316
C+ LGS LG +H + + + T + NA+++MY+KCG ++ A ++F+ ++ ERDV
Sbjct: 313 CSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVS 372
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+ +I G HG +A+ LF MQ V PNDITF +LSAC+H G +EG F M
Sbjct: 373 SWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADM 432
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ + +++HY C+VD+LGRAG L++A +I+++P +P ++WG+LL +CR + N E+
Sbjct: 433 TK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTEL 491
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
IA +L LEPE TG YVL+SNIYA +W++V +R+ ++S+ +KK S+IE
Sbjct: 492 GEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGT 551
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI 534
EV F + D + P+ ++++ +E LA+ V D+
Sbjct: 552 EVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDL 589
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 170/415 (40%), Positives = 260/415 (62%), Gaps = 4/415 (0%)
Query: 113 ILPDKFTLPFVIKSCA---GLLCPSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDEL 168
I P+ T ++ +CA S G IHAHV K GL + + AL+D+Y KC +
Sbjct: 87 IEPNHITFITLLSACAHYPSRSSISFGTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRV 146
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A F++M R++V+WN +I GY R G+ + A +FD +P +SWTA+I G+
Sbjct: 147 ESARLAFDQMGVRNLVSWNTMIDGYMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKD 206
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
+ EAL+ FR+MQ+ G+ PD +++++V+ ACA LG+L LG W+H + N
Sbjct: 207 YHEEALECFREMQLSGVAPDYVTVIAVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSN 266
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
+LI+MY +CGCI+ A Q+FD+M +R +VSW+++I G A +G A +A+ F+ MQ P
Sbjct: 267 SLIDMYSRCGCIDLARQVFDRMPQRTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKP 326
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ +++ G L AC+H G EGL F+ MKR I +IEHYGCLVDL RAGRL++ALN+
Sbjct: 327 DGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNV 386
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
++ MPMKP+ I GSLL++CRT N+ +A M +L+ L+ NYVLLSNIYA G+W
Sbjct: 387 LKNMPMKPNEVILGSLLAACRTQGNIGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKW 446
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
+ +++R+ ++ + ++K PG S IE+++ + +FVSGD + I+ LE L+
Sbjct: 447 DGANKVRRRMKERGIQKKPGFSSIEIDSSIHKFVSGDKSHEEKDHIYAALEFLSF 501
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 114/247 (46%), Gaps = 37/247 (14%)
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL---GSLELGEW 270
IVSWT I+ Y G +A F QM+ IEP+ I+ +++L ACA S+ G
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTA 115
Query: 271 IHMYCDKNHL-LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
IH + K L + ++ ALI+MY KCG + A FDQM R++VSW+T+I G +G
Sbjct: 116 IHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNG 175
Query: 330 KAHKAIHL-------------------------------FHEMQRLKVPPNDITFIGLLS 358
K A+ + F EMQ V P+ +T I +++
Sbjct: 176 KFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIA 235
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
ACA+ G GL + + + ++ L+D+ R G +D A + + MP +
Sbjct: 236 ACANLGTLGLGL-WVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLV 294
Query: 419 KIWGSLL 425
W S++
Sbjct: 295 S-WNSII 300
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+VSW+T I G KA F +M+ + PN ITFI LLSACAH + + + F
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAH--YPSRSSISFG 113
Query: 375 SMKRDHHIE-----HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
+ H + + + L+D+ + GR++ A ++M ++ + W +++
Sbjct: 114 TAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVR-NLVSWNTMIDGYM 172
Query: 430 TYSNLEIAVIAMEHLLV 446
E A+ + L V
Sbjct: 173 RNGKFEDALQVFDGLPV 189
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 287/503 (57%), Gaps = 45/503 (8%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
S + ++ +H+ ++K + F+ +ID + G + A +F ++ E +V +N
Sbjct: 17 SAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNT 76
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+ A L+ +M P+K T+ +
Sbjct: 77 AMAAMVREGELAGVRKLFDEM-----------PEKDTVSW-------------------- 105
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
N +LD Y K E+ A ++F+ M +R++V+W+ ++SGY + G ++ A
Sbjct: 106 -------------NTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMA 152
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R++FDKMP +V+WT M+S G EA +F QM+ +E D ++VS+L ACA+
Sbjct: 153 RVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAES 212
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD-QMVERDVVSWSTV 321
GSL LG+ IH Y K +L R T +CNALI+M+ KCGC+N+A +FD + V++D VSW+++
Sbjct: 213 GSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSI 272
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
IGG A HG KA+ LF +M++ P+ +T I +LSAC H GF +EG +F +M+RD+
Sbjct: 273 IGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYG 332
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
I +IEHYGC++DLLGR G + +A+++I+ MP +P+ IWGSLLS+CR + N+E A IA+
Sbjct: 333 IMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAV 392
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
L L+P + GNY +LSNIYA+ G+W D+++ R ++ +KT G S +E+N EF
Sbjct: 393 NELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEF 452
Query: 502 VSGDDTKPFLKDIFWLLELLALH 524
GD I +++ L+ H
Sbjct: 453 TVGDRKHQDSDQISEMVDRLSSH 475
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/506 (37%), Positives = 299/506 (59%), Gaps = 44/506 (8%)
Query: 30 LKKIHTQILKYLLSQSNFL--VTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
L+++H IL L S+F ++K++ C + G++ YA +F Q+ PN+F +N++I+
Sbjct: 4 LRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIK 63
Query: 86 AYTNNH-LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
Y+ H L I L+K++ TG + P+ FTL FV+K+CA + G Q+H+HV
Sbjct: 64 GYSQIHTLSKEPIFLFKKL---TETGYPV-PNSFTLAFVLKACAIVTAFGEGLQVHSHVL 119
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
K G S + +L++ YGKC+E+ G+AR
Sbjct: 120 KDGFGSSLFVQTSLVNFYGKCEEI-----------------------GFAR--------K 148
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+F++MP +V+WTAMISG+ +G+ EA+++FR+MQ GI+PD +++VSV+ ACA G+
Sbjct: 149 VFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGA 208
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
L++G W+H Y +K +L + AL++MY KCGCI +A Q+F M +D +WS++I G
Sbjct: 209 LDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMG 268
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
A HG A AI F +M +V P+ +TF+ +LSACAH G + G ++ S+ + IE
Sbjct: 269 FAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFW-SLMLEFGIEP 327
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+EHYGC VDLL R+G +++A I M + P+A W SLL C+ L + I +L
Sbjct: 328 SVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYL 387
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
L LEP + NY+++SN+Y+ +WE +S +RK+++ K +K PGCS IEV+ V EFV G
Sbjct: 388 LELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMG 447
Query: 505 DDTKPFLKDIFWLLELLALHQDRAKD 530
D + P +K + +E +++ R +D
Sbjct: 448 DQSHPEVKMLREFMEEMSM---RVRD 470
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 287/503 (57%), Gaps = 45/503 (8%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
S + ++ +H+ ++K + F+ +ID + G + A +F ++ E +V +N
Sbjct: 140 SAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNT 199
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+ A L+ +M P+K T+ +
Sbjct: 200 AMAAMVREGELAGVRKLFDEM-----------PEKDTVSW-------------------- 228
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
N +LD Y K E+ A ++F+ M +R++V+W+ ++SGY + G ++ A
Sbjct: 229 -------------NTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMA 275
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R++FDKMP +V+WT M+S G EA +F QM+ +E D ++VS+L ACA+
Sbjct: 276 RVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAES 335
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD-QMVERDVVSWSTV 321
GSL LG+ IH Y K +L R T +CNALI+M+ KCGC+N+A +FD + V++D VSW+++
Sbjct: 336 GSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSI 395
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
IGG A HG KA+ LF +M++ P+ +T I +LSAC H GF +EG +F +M+RD+
Sbjct: 396 IGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYG 455
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
I +IEHYGC++DLLGR G + +A+++I+ MP +P+ IWGSLLS+CR + N+E A IA+
Sbjct: 456 IMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAV 515
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
L L+P + GNY +LSNIYA+ G+W D+++ R ++ +KT G S +E+N EF
Sbjct: 516 NELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEF 575
Query: 502 VSGDDTKPFLKDIFWLLELLALH 524
GD I +++ L+ H
Sbjct: 576 TVGDRKHQDSDQISEMVDRLSSH 598
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/482 (37%), Positives = 291/482 (60%), Gaps = 5/482 (1%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG-GDLAYASLLFKQVKEPNVFLYNA 82
C + +L++ H ++K + +F ++++ C S G++ YA L+F Q++ PN+F +N
Sbjct: 34 CTTMRDLQQFHAHLIKSGQAIESFAASRILAFCASPLGNMDYAYLVFLQMQNPNLFSWNT 93
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+IR ++ + +A+ L+ ML S + P + T P + K+ + L G Q+H
Sbjct: 94 VIRGFSQSSNPQIALYLFIDML----VSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGR 149
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
+ K GL+ N +L +Y L EA ++F + + D+V+WN++I G A+ G++ ++
Sbjct: 150 IIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDES 209
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R LFDKMP +SW +MI GY G + EAL +F +MQ I+P E ++VS+L A AQ+
Sbjct: 210 RKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQI 269
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
G+L G WIH Y KN+L ++ A+I+MY KCG I A Q+F+++ R + SW+++I
Sbjct: 270 GALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMI 329
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
GLA +G +AI +F ++ + P+ I+F+ +L+AC H +EG+ +F MK + I
Sbjct: 330 FGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRMKNTYRI 389
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
E I+HY +VD++ RAG L++A I+ MP++ DA IWG LLS+CR Y N E+A A E
Sbjct: 390 EPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYGNTEMAKRAAE 449
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
+ L+PE+T YVL++NI+A + R +R K ++K PG S IEV+ EV EF+
Sbjct: 450 KVNELDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSFIEVDEEVHEFI 509
Query: 503 SG 504
+G
Sbjct: 510 AG 511
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/510 (38%), Positives = 290/510 (56%), Gaps = 51/510 (10%)
Query: 26 NLIELKKIHT-QILKYLLSQSNFL-------VTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
NL L++IH I+ S FL M+ + YA +F Q+ +P+
Sbjct: 13 NLGTLRQIHALMIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQPDT 72
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F++N IR + +H A+ LY QM T + PD FT P V+K+C L + G
Sbjct: 73 FMWNTYIRGSSQSHDPVHAVALYAQM-----THRSVKPDNFTFPLVLKACTKLFWVNTGS 127
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+H V + G S+ + N LL + KC +L A+ +F++ D+VAW+ LI+GYA+ G
Sbjct: 128 VVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRG 187
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTH-------------------------IGSYA- 231
+ AR LFD+MP +VSW MI+ YT +G Y
Sbjct: 188 DLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGYVL 247
Query: 232 -----EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH---MYCDKNHLLRR 283
EAL++F +M VG PDE++++S+L ACA LG + GE +H M +K L
Sbjct: 248 HNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIMELNKGKL--S 303
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
T++ NAL++MY KCG I + +F + ++D+VSW++VIGGLA HG A +++ LF EMQR
Sbjct: 304 TLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQR 363
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
KV P++ITF+G+L+AC+HTG +EG YF MK + IE I H GC+VD+L RAG L
Sbjct: 364 TKVCPDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLK 423
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A + I M ++P+A +W SLL +C+ + ++E+A A E LL + + +G+YVLLSN+YA
Sbjct: 424 EAFDFIASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYA 483
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
HG W+ +RKL+ + KT G S +E
Sbjct: 484 SHGEWDGAENVRKLMDDNGVTKTRGSSFVE 513
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 302/545 (55%), Gaps = 58/545 (10%)
Query: 5 IGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSN---FLVTKMIDVCNSGGD 61
+G S +L+ +LQ+C ++ +LK++H L+ + FL K++ + +S D
Sbjct: 16 LGQSSCYQLDRVHATVLQTCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSD 75
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+ YA +F ++ + F++N +IRA ++ A LY++ML + PDK T
Sbjct: 76 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS----PDKHTF 131
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PFV+K+CA + S GKQ+H + K G N L+ LYG C
Sbjct: 132 PFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC--------------- 176
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
G + AR +FD+MP ++VSW +MI G Y AL +FR+M
Sbjct: 177 ----------------GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM 220
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY----CDKNHLLRRTVICNALIEMYIK 296
Q EPD ++ SVL ACA LGSL LG W H + CD + + ++ N+LIEMY K
Sbjct: 221 QR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD-VAMDVLVKNSLIEMYCK 278
Query: 297 CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFI 354
CG + A Q+F M +RD+ SW+ +I G A HG+A +A++ F M +R V PN +TF+
Sbjct: 279 CGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFV 338
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM 414
GLL AC H GF N+G YFD M RD+ IE +EHYGC+VDL+ RAG + +A++++ MPM
Sbjct: 339 GLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPM 398
Query: 415 KPDAKIWGSLLSS-CRTYSNLEIAVIAMEHLLVLEPED-------TGNYVLLSNIYAKHG 466
KPDA IW SLL + C+ +++E++ +++ + ++ +G YVLLS +YA
Sbjct: 399 KPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASAS 458
Query: 467 RWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQD 526
RW DV +RKL+ ++K PGCS IE+N EF +GD + P K I+ L+++ D
Sbjct: 459 RWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVI---DD 515
Query: 527 RAKDV 531
R + +
Sbjct: 516 RLRSI 520
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/480 (37%), Positives = 296/480 (61%), Gaps = 8/480 (1%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F IL++C L E +++H I K L F+ +I + + G+L YA +F ++
Sbjct: 555 FPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMV 614
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +N++I Y+ + + + L+K M + + DK T+ V+ +C L
Sbjct: 615 VKDVVSWNSLICGYSQCNRFKDILALFKLMQNEG-----VKADKVTMIKVVSACTRLGDY 669
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S+ + ++ + ++ N L+D +G+ +L A KVF M R+IV N +I+ Y
Sbjct: 670 SMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAY 729
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ + AR +FD++P ++SW++MISGY+ +++AL++FRQMQ ++PD I I
Sbjct: 730 AKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIA 789
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV+ +CA LG+L+LG+W+H Y +N++ T++ N+LI+MY+KCG +A Q+F +M E+
Sbjct: 790 SVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEK 849
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +SW+++I GLAN+G ++++LF M PN +TF+G+L ACA+ EGL +F
Sbjct: 850 DTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHF 909
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SMKR + +E +++HYGC+VDLLGRAG+L++AL I EMP+ PD +W LL SC T+ +
Sbjct: 910 ESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGD 969
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+ IA I + L LEP ++GNY LLSN YA RW + +R+ + ++K+PGCS +E
Sbjct: 970 VAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 1029
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 263/424 (62%), Gaps = 7/424 (1%)
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
++ L+ QV + ++A+++AY++ A+ Q+ R R + D + F
Sbjct: 42 HSQLIAHQVFDRRPTPWHALLKAYSHGPHPQDAL----QLFRHARWHAA--DDTYAFTFA 95
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+K+CAGL P Q+H V + G + + AL+++Y C L ++ FEEM ++
Sbjct: 96 LKACAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNA 155
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
V+WN +I+G+A G+++ AR+LF++MP +VSW+ MI GYT EA+ +FR+M
Sbjct: 156 VSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAE 215
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
GI P EI++++V+PA + +G + +GE +H YC+K L+ + N+LI++Y K G I +
Sbjct: 216 GISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNS 275
Query: 304 SQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
++FD+M++ R++VSW+++I G A HG + KA+ LF +M+R + PN ITF+ +L AC+H
Sbjct: 276 LRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSH 335
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G +G+ +F SM +++I ++H+GC++D+LGRAGRL +A II + P++ +A +W
Sbjct: 336 GGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWR 395
Query: 423 SLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
+LL C Y +E+ M+ +L LE E G++V+LSN+ + R+ D +RKL+ ++
Sbjct: 396 TLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRN 455
Query: 483 MKKT 486
K+
Sbjct: 456 SVKS 459
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 192/369 (52%), Gaps = 15/369 (4%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
DL +A +F Q++ P FL+N +IR + AI YK+ G ++PD T
Sbjct: 501 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKA-----QGGGMVPDNLTF 555
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PF++K+CA + + G+Q+H H+ K GL S N+L+ LY C L A VF+EM
Sbjct: 556 PFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVV 615
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDV 236
+D+V+WN+LI GY++ + K LF M + V+ ++S T +G Y+ A +
Sbjct: 616 KDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYM 675
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
R ++ IE D +++ + G L+ E + N +R V NA+I Y K
Sbjct: 676 VRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFF----NMKVRNIVTMNAMIAAYAK 731
Query: 297 CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
I A ++FDQ+ ++D++SWS++I G + A+ +F +MQR KV P+ I +
Sbjct: 732 GQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASV 791
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
+S+CAH G + G + ++R+ +I+ L+D+ + G +AL + +EM K
Sbjct: 792 VSSCAHLGALDLGKWVHEYVRRN-NIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEK- 849
Query: 417 DAKIWGSLL 425
D W S++
Sbjct: 850 DTLSWNSII 858
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 53/281 (18%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G++ YA LLF+++ NV ++ MI YT A+ L+++M+ + I P + T
Sbjct: 169 GEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEG-----ISPSEIT 223
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ V+ + + + +G+ +H + K GL N+L+DLY K + + +VF+EM
Sbjct: 224 VLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEML 283
Query: 180 D-RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
D R++V+W ++ISG+A G K A+++F
Sbjct: 284 DRRNLVSWTSIISGFAMHGLSVK-------------------------------AVELFA 312
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELG-----EWIHMY---CDKNHLLRRTVICNAL 290
M+ GI P+ I+ +SVL AC+ G +E G I+ Y D H +
Sbjct: 313 DMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHF-------GCI 365
Query: 291 IEMYIKCGCINQASQLF-DQMVERDVVSWSTVIGGLANHGK 330
I+M + G + +A Q+ D VE + W T++G + +G+
Sbjct: 366 IDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGE 406
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 306/521 (58%), Gaps = 11/521 (2%)
Query: 18 VPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V ++ +C L +L +++ I + L + +V ++D+ G + A LF + +
Sbjct: 236 VCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVD 295
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD-PRTGSLILPDKFTLPFVIKSCAGLLCP 133
N+ LYN ++ Y L A+ + +ML+ PR PD+ T+ I + A L+
Sbjct: 296 RNLVLYNTILSNYARQGLAREALAILDEMLQQGPR------PDRVTMLSAISASAQLVDL 349
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK H +V + GL+ N ++D+Y KC + A +VF+ M+++ +V+WN+L +G+
Sbjct: 350 FYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGF 409
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
R G ++ A +F+++P V W MISG + +A+++FR+MQ GI+ D ++++
Sbjct: 410 IRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMM 469
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+ AC LG+ EL +W+H Y +KN + + AL++M+ +CG A Q+F++M ER
Sbjct: 470 GIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTER 529
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV +W+ IG +A G A LF++M V P+ + F+ +L+AC+H G +GL F
Sbjct: 530 DVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF 589
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
S+ DH I +IEHYGC+VDLLGRAG L +A ++I+ MPM+P+ +WGSLL++CR + N
Sbjct: 590 -SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKN 648
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A A E + L P+ G +VLLSNIYA G+W DV+R+R +R K ++K PG S ++
Sbjct: 649 VEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQ 708
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI 534
VN + EF SGD++ P + I +L+ + A + D+
Sbjct: 709 VNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDL 749
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 213/459 (46%), Gaps = 81/459 (17%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA------YASLLFKQVKE 74
L+ C+ L +LK++H QI K L Q +TK++ N+G ++A YA F+ KE
Sbjct: 32 LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLV---NAGAEIASPESLDYARKAFELFKE 88
Query: 75 P-----NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+F+ N++IR Y++ L AI LY +ML T P+ +T PFV+ C
Sbjct: 89 DVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVT-----PNHYTFPFVLSGCTK 143
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
+ G Q+H V K GL + D+ N L
Sbjct: 144 IAAFCEGIQVHGSVVKMGL-------------------------------EEDVFIQNCL 172
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
I YA G M +F+ M +VSWT++I GY EA+ +F +M GI P
Sbjct: 173 IHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSS 232
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+++V V+ ACA+L L++GE + Y + L V+ NAL++MY+KCG I+ A +LFD+
Sbjct: 233 VTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDE 292
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-------- 361
V+R++V ++T++ A G A +A+ + EM + P+ +T + +SA A
Sbjct: 293 CVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYG 352
Query: 362 ---HTGFWNEGLMYFDSMKR---DHHIEHKIEHYGCLV-DLLG---------------RA 399
H GL +DS+ D +++ C V DL+ R
Sbjct: 353 KVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRN 412
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
G ++ A + ++P + +A W +++S S E A+
Sbjct: 413 GDVESAWEVFNQIPER-NAVFWNTMISGLVQKSLFEDAI 450
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 165/370 (44%), Gaps = 56/370 (15%)
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
++I GY+ G EA+ ++ +M ++G+ P+ + VL C ++ + G +H K
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
L I N LI Y +CG ++ ++F+ M ER+VVSW+++I G A + +A+ L
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSL 219
Query: 338 FHEMQRLKVPPNDITFIGLLSACAH----------TGFWNE-GL------------MYF- 373
F EM + P+ +T + ++SACA + E GL MY
Sbjct: 220 FFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMK 279
Query: 374 ----DSMKR--DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM---KPDAKIWGSL 424
D+ KR D ++ + Y ++ R G +AL I++EM +PD S
Sbjct: 280 CGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 339
Query: 425 LSSCRTYSNLEIAVIAMEHLLV--LEPEDT-GNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
+S+ +L + +++ LE D+ GN ++ ++Y K G+ E R+ L+ +K
Sbjct: 340 ISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVII--DMYMKCGKPEMACRVFDLMSNK 397
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTK---------PFLKDIFWLLELLALHQDRA-KDV 531
+++ N+ F+ D + P +FW + L Q +D
Sbjct: 398 --------TVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDA 449
Query: 532 IDIMYEDIGE 541
I++ E GE
Sbjct: 450 IELFREMQGE 459
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/456 (40%), Positives = 278/456 (60%), Gaps = 8/456 (1%)
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYG-LAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
++ +P +FLYN +I+AY+++ + +LY Q+ LP++ T F+
Sbjct: 1 MVLHHSSKPTLFLYNKLIQAYSSHPQHQHRCFSLYSQIRLHG-----FLPNQHTFNFLFS 55
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+C L SLG+ +H H K G + ALLD+Y K L A K+F+EM R +
Sbjct: 56 ACTSLSSSSLGQMLHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVRGVPR 115
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVG 244
WN +++G AR G M A LF MP +V WT MISGY+ Y +AL +F M Q G
Sbjct: 116 WNAMMAGLARFGDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKG 175
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
I P+ +++VS+LPACA L +LE+G+ + Y KN + NA++EMY+KCG I+ A
Sbjct: 176 IMPNAVTLVSILPACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDAAW 235
Query: 305 QLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
++F+++ R++ SW++++ GLA HG+ KA+ L+ +M P+D+TF+GLL AC
Sbjct: 236 RVFNEIGSLRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQG 295
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G +G F S +I K+EHYGC+VDLLGRAG+L +A +I+ M MKPD+ IWG+
Sbjct: 296 GMVKKGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWGA 355
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL +C + N+E+A IA E L VLEP + GNYV+LSNIYA G+W+ V+++RK+++ +
Sbjct: 356 LLGACSFHGNVELAEIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKI 415
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
K+ G S IE ++ +F+ D + P +IF LL+
Sbjct: 416 TKSAGHSFIEEGAQLHKFIVKDRSHPKSNEIFALLD 451
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 194/524 (37%), Positives = 301/524 (57%), Gaps = 15/524 (2%)
Query: 14 EDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F L +C L++L +IH I K S ++ + ++D+ + +A A F
Sbjct: 151 EYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFD 210
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ N+ +N++I Y N G A+ ++ +M+ I PD+ TL V +CA L
Sbjct: 211 DMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMM-----NCGIEPDEITLASVASACASL 265
Query: 131 LCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
G QIHA V K ++ + NAL+D+Y KC + EA VF+ M RD+V+ ++
Sbjct: 266 SAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSM 325
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+SGYA+ +K AR++F M +VSW A+I+GYT G EA+ +F ++ I P
Sbjct: 326 VSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTH 385
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT------VICNALIEMYIKCGCINQA 303
+ ++L ACA L L+LG H + K+ ++ + N+LI+MY+KCG +
Sbjct: 386 YTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDG 445
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+F++M+ERD VSW+ +I G A +G +A+ +F EM P+ +T IG+LSAC+H
Sbjct: 446 RLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHA 505
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G EG YF SM +H + +HY C+VDLLGRAG LD+A N+I+ MPM+PDA +WGS
Sbjct: 506 GLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGS 565
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL++C+ + N+ + E LL ++P ++G YVLLSN+YA+ GRW+DV R+RK +R +
Sbjct: 566 LLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGV 625
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
K PGCS I + + + F+ D P KDI+ +L++L R
Sbjct: 626 IKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKR 669
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 179/378 (47%), Gaps = 4/378 (1%)
Query: 109 TGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL 168
G L D ++ +C + +HA + K S +N L+D+YGKC L
Sbjct: 11 VGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFL 70
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
+A KVF+ M R+ +WN ++ + G + +A LF MP SW AM+SG+
Sbjct: 71 EDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRD 130
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
+ EAL M +E S S L ACA L L +G IH K+ + +
Sbjct: 131 RFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGS 190
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY KC + A + FD M R++VSW+++I +G A KA+ +F M + P
Sbjct: 191 ALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEP 250
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
++IT + SACA EGL + + + + LVD+ + R+++A +
Sbjct: 251 DEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
+ MP++ D S++S S+++ A + +++ + ++ L Y ++G
Sbjct: 311 FDRMPLR-DVVSETSMVSGYAKASSVKAARLMFSNMM---ERNVVSWNALIAGYTQNGEN 366
Query: 469 EDVSRMRKLIRSKSMKKT 486
E+ R+ L++ +S+ T
Sbjct: 367 EEAVRLFLLLKRESIWPT 384
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 214/481 (44%), Gaps = 110/481 (22%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L +C +++ E + +H +I+K S F+ +++DV G L A +F ++
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLILP-----DKF--TLPFVI- 124
+ N F +NA++ A T A+NL+K M RD + + ++ D+F L FV+
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVD 141
Query: 125 -----------------KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
+CAGL+ S+G QIH + K +AL+D+Y KC
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRV 201
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+ A + F++M R+IV+WN+LI+ Y + G K
Sbjct: 202 VASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGK-------------------------- 235
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT-VI 286
AL+VF +M GIEPDEI++ SV ACA L ++ G IH K+ R V+
Sbjct: 236 -----ALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVL 290
Query: 287 CNALIEMYIKCGCINQASQLFDQ-------------------------------MVERDV 315
NAL++MY KC +N+A +FD+ M+ER+V
Sbjct: 291 GNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNV 350
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC-----------AHTG 364
VSW+ +I G +G+ +A+ LF ++R + P TF LL+AC AHT
Sbjct: 351 VSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTH 410
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
G + D + + L+D+ + G ++ + E M ++ D W ++
Sbjct: 411 ILKHGFWFKSGEDSDIFVGNS------LIDMYMKCGLVEDGRLVFERM-LERDNVSWNAM 463
Query: 425 L 425
+
Sbjct: 464 I 464
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 295/501 (58%), Gaps = 10/501 (1%)
Query: 18 VPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V ++ +C L +L+ ++ T I + L + +V ++D+ G + A +F + +
Sbjct: 244 VGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVD 303
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLR-DPRTGSLILPDKFTLPFVIKSCAGLLCP 133
N+ LYN ++ Y L + + +ML+ PR PD+ T+ + +C+ L
Sbjct: 304 KNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPR------PDRITMLSAVSACSELDDV 357
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S GK H +V + GL+ NA++++Y KC + A +VF+ M ++ V+WN+LI+G+
Sbjct: 358 SCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGF 417
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
R G M+ A +F MP + +VSW MI + EA+++FR MQ GI D++++V
Sbjct: 418 VRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMV 477
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
V AC LG+L+L +WIH Y K + + AL++M+ +CG A Q+F++MV+R
Sbjct: 478 GVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKR 537
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV +W+ IG +A G AI LF EM + + P+ + F+ LL+A +H G +G F
Sbjct: 538 DVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIF 597
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SMK + I + HYGC+VDLLGRAG L +AL++I M M+P+ IWGSLL++CR + N
Sbjct: 598 RSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKN 657
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
++IA A E + L+PE TG +VLLSNIYA GRW+DV+++R ++ K K PG S IE
Sbjct: 658 VDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIE 717
Query: 494 VNNEVQEFVSGDDTKPFLKDI 514
+N ++ EF +GD++ P + I
Sbjct: 718 INGKIFEFTTGDESHPEMTHI 738
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 212/430 (49%), Gaps = 56/430 (13%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG---DLAYASLLFKQVKEPNV 77
+ C+ + ELK++H+QI K L+ +T +I C G L YA + E N
Sbjct: 40 FKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNG 99
Query: 78 -----FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
++++++IR ++ L AI +++Q++ G++ PD FT PFV+ +C
Sbjct: 100 IMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMC---MGAV--PDNFTFPFVLSACTKSAA 154
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+ G Q+H + K G +RD+ N+LI
Sbjct: 155 LTEGFQVHGAIVKMGF-------------------------------ERDMFVENSLIHF 183
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y G++ R +FDKM +VSWT++I GY G Y EA+ +F +M VGI P+ +++
Sbjct: 184 YGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTM 243
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V V+ ACA+L L+LGE + + L ++ NAL++MY+KCG I++A ++FD+ V+
Sbjct: 244 VGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVD 303
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH-----TGFWN 367
+++V ++T++ G A + + + EM + P+ IT + +SAC+ G W
Sbjct: 304 KNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWC 363
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
G + + ++ ++ + I +++ + G+ + A + + M K W SL++
Sbjct: 364 HGYVLRNGLEGWDNVCNAI------INMYMKCGKQEMACRVFDRMLNKTRVS-WNSLIAG 416
Query: 428 CRTYSNLEIA 437
++E A
Sbjct: 417 FVRNGDMESA 426
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 294/514 (57%), Gaps = 37/514 (7%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
++K +Q FLV + I C++ + A+ F V+ PNV ++NA+IR + A
Sbjct: 1 MIKTNTTQDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQA 60
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ Y MLR+ ++P ++ +IK+C L+ + G+ +H HV K G SH +
Sbjct: 61 LVHYMHMLRNN-----VMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQT 115
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
L++ Y ++ + +VF++M +RD+ AW +IS + R G M A LFD+MP + +
Sbjct: 116 TLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVAT 175
Query: 217 WTAMISGYTHIGS-------------------------------YAEALDVFRQMQMVGI 245
W AMI GY +G+ Y E + +F + G+
Sbjct: 176 WNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGM 235
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
PDE+++ +V+ ACA LG+L LG+ +H+Y I ++LI+MY KCG I+ A
Sbjct: 236 IPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALL 295
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+F ++ +++ W+ +I GLA HG +A+ +F EM+R ++ PN +TFI +L+AC H GF
Sbjct: 296 VFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGF 355
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
EG +F SM +D+ I ++EHYGC+VDLL +AG L+ AL +I M ++P++ IWG+LL
Sbjct: 356 IEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALL 415
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM-K 484
+ C+ + NLEIA IA+++L+VLEP ++G+Y LL N+YA+ RW +V+++R ++ + K
Sbjct: 416 NGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEK 475
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+ PG S +E+N V F + D P + LL
Sbjct: 476 RCPGSSWVEINKTVHLFAASDTYHPSYSQLHLLL 509
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 257/412 (62%), Gaps = 4/412 (0%)
Query: 115 PDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELIEA 171
P+ T ++ C S LG +H + CK GL ++H + A++ +Y K + +A
Sbjct: 69 PNHITFIAILSGCGDFPSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKA 128
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
VF+ M D++ V WN +I GY R GQ+ A +FDKMP ++SWTAMI+G+ + G +
Sbjct: 129 RCVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHE 188
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL FR+MQ+ G++PD ++I++ L AC LG+L G W+H Y + N+LI
Sbjct: 189 EALAWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLI 248
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
++Y +CGC+ A Q+FD+M +R VVSW++VI G A +G AH+++ F +MQ + P+ +
Sbjct: 249 DLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAV 308
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
TF G L+AC+H G EGL YF M D+ I +IEHYGCLVDL RAGRL+ AL +++
Sbjct: 309 TFTGALTACSHVGLVEEGLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQS 368
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEI-AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
MPMKP+ + GSLL++CR + N + A M+HL L + NYV+LSN+YA G+WE
Sbjct: 369 MPMKPNEVVIGSLLAACRNHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEG 428
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
S+MR+ ++ +KK PG S IE+++ F++GD +I +L+L++
Sbjct: 429 ASKMRRKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETTNICEVLKLIS 480
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 78/342 (22%)
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL--GSLELGEWIH 272
VSWT+ I+ T G AEA F M++ G+EP+ I+ +++L C GS LG+ +H
Sbjct: 37 VSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEALGDLLH 96
Query: 273 MYC-----DKNHLL---------------------------RRTVICNALIEMYIKCGCI 300
Y D+NH++ + +V N +I+ Y++ G +
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+ A+++FD+M ERD++SW+ +I G N G +A+ F EMQ V P+ + I L+AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIAALNAC 216
Query: 361 AHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP------ 413
+ G + GL ++ M +D ++ + L+DL R G ++ A + ++M
Sbjct: 217 TNLGALSFGLWVHRYVMSQD--FKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVS 274
Query: 414 ----------------------------MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
KPDA + L++C +E + + ++
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGLRYFQIMI 334
Query: 446 V---LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+ P +Y L ++Y++ GR ED KL++S MK
Sbjct: 335 SDYRISPR-IEHYGCLVDLYSRAGRLEDA---LKLVQSMPMK 372
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ Y+ +++ MID G + A+ +F ++ E ++ + AMI + N + A
Sbjct: 131 VFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEA 190
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + + +C L S G +H +V K++ N
Sbjct: 191 LAWFREM-----QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSN 245
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI-- 214
+L+DLY +C + A +VF++M R +V+WN++I G+A G ++ + F KM
Sbjct: 246 SLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKP 305
Query: 215 --VSWTAMISGYTHIGSYAEALDVFRQM-------------------------------- 240
V++T ++ +H+G E L F+ M
Sbjct: 306 DAVTFTGALTACSHVGLVEEGLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKL 365
Query: 241 -QMVGIEPDEISIVSVLPACAQLGS 264
Q + ++P+E+ I S+L AC G+
Sbjct: 366 VQSMPMKPNEVVIGSLLAACRNHGN 390
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 44/164 (26%)
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
N Q +Q + VSW++ I L +G+ +A F +M+ V PN ITFI +LS C
Sbjct: 22 NPKIQRLNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGC 81
Query: 361 AHTGFWNEGL--------------------------MY------------FDSMKRDHHI 382
+E L MY FD M+ + +
Sbjct: 82 GDFPSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSV 141
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ ++D R+G++D A + ++MP + D W ++++
Sbjct: 142 T-----WNTMIDGYMRSGQVDNAAKMFDKMPER-DLISWTAMIN 179
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/473 (39%), Positives = 288/473 (60%), Gaps = 13/473 (2%)
Query: 28 IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
+E +K H +K + + ++++ G + A +F ++ + L+N M+R Y
Sbjct: 66 VEGRKAHAAAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCY 125
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH---VC 144
Y A+ L +QM R S + PD+ TL + +C+ SLG++IH + V
Sbjct: 126 IRCGRYSAAVALSEQMER-----SGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVF 180
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
F L NALLD+Y K D L EA K+FE+M R+I++W L+SGY GQ+ KAR+
Sbjct: 181 GFNLP----VANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARV 236
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
LF++ ++ WTAMI+ G + EAL +FR MQM +EPD ++V++L CA LG+
Sbjct: 237 LFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGA 296
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
L+ GEWIH Y ++ + V+ ALI+MY KCG I ++ ++F +M RD +W+ +I G
Sbjct: 297 LDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICG 356
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA +G+A +A+ LF +MQR KV P+ +TFIG+LSAC H G +EG F +M+ + IE
Sbjct: 357 LATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEP 416
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA-KIWGSLLSSCRTYSNLEIAVIAMEH 443
++EHY CLV+LLGRAG LD+A +I ++P+ DA ++G+LL++C+ + N+E++ +
Sbjct: 417 RVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKR 476
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ + + T +L+SN+YA RWEDV R+R + ++KKT GCSLIEV
Sbjct: 477 ICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKTAGCSLIEVKG 529
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 173/382 (45%), Gaps = 72/382 (18%)
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N +IR + + +Y D R L+ D FT PFV+++ L G++ H
Sbjct: 18 NVLIRTLARRGSFARVMAVYY----DLRARGLV-ADSFTYPFVLRAVGVLKLSVEGRKAH 72
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
A K G + + T ++L+++Y + A KVF+EM R +V WN ++ Y R G+
Sbjct: 73 AAAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGR-- 130
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
Y+ A+ + QM+ G+ PD +++V+ + AC+
Sbjct: 131 -----------------------------YSAAVALSEQMERSGVTPDRVTLVTAVTACS 161
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
+ L LG IH+Y D N + NAL++MY K C+ +A +LF+QM R+++SW+
Sbjct: 162 RARDLSLGRRIHVYMD-NVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTI 220
Query: 321 VIGGLA-------------------------------NHGKAHKAIHLFHEMQRLKVPPN 349
++ G HG +A+ LF +MQ +V P+
Sbjct: 221 LVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPD 280
Query: 350 DITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
T + LL+ CA+ G ++G ++ + +R I+ + L+D+ + G ++++L +
Sbjct: 281 RFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGT--ALIDMYSKCGHIEKSLEV 338
Query: 409 IEEMPMKPDAKIWGSLLSSCRT 430
M + DA W +++ T
Sbjct: 339 FWRMQGR-DATAWTAIICGLAT 359
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/468 (38%), Positives = 278/468 (59%), Gaps = 38/468 (8%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S GD+ A LF ++ +V +NAMI Y Y A+ L+++M++
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMN-- 191
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ PD+ T V+ +CA LG+Q+H+ V G S+ NAL+DLY KC
Sbjct: 192 ---VRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKC---- 244
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LF + Y ++SW +I GYTH+
Sbjct: 245 ---------------------------GEVETACGLFQGLSYKDVISWNTLIGGYTHMNL 277
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVIC 287
Y EAL +F++M G P++++++SVLPACA LG++++G WIH+Y DK + + +
Sbjct: 278 YKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 337
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+LI+MY KCG I A Q+F+ M+ + + SW+ +I G A HG+A + LF M+++ +
Sbjct: 338 TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIE 397
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+DITF+GLLSAC+H+G + G F SM +D+ + K+EHYGC++DLLG +G +A
Sbjct: 398 PDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 457
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I M M+PD IW SLL +C+ + N+E+A ++L+ +EPE+ +Y+LLSNIYA GR
Sbjct: 458 MINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGR 517
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
WEDV+R+R L+ K MKK PGCS IEV++ V EFV GD P ++I+
Sbjct: 518 WEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIY 565
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 231/432 (53%), Gaps = 17/432 (3%)
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTL 120
L YA+ +F+ ++EPN ++N MIR + + ++ LY M+ SL +LP+ +T
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMV------SLGLLPNSYTF 67
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PF++KSCA + G+QIH V K G +L+ +Y + L +A+KVF+ +
Sbjct: 68 PFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSH 127
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+V++ LI+GYA G ++ A+ LFD++P +VSW AMISGY G Y EAL++F +M
Sbjct: 128 RDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEM 187
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ + PDE + V+VL ACA GS+ELG +H + D + I NALI++Y KCG +
Sbjct: 188 MKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEV 247
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A LF + +DV+SW+T+IGG + +A+ LF EM R PND+T + +L AC
Sbjct: 248 ETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPAC 307
Query: 361 AHTGFWNEGL---MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
AH G + G +Y D KR + + L+D+ + G ++ A + M K
Sbjct: 308 AHLGAIDIGRWIHVYID--KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 365
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHL--LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
+ W +++ + + + + + +EP+D LLS H D+ R
Sbjct: 366 SS-WNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSA--CSHSGMLDLGRHI 422
Query: 476 KLIRSKSMKKTP 487
++ K TP
Sbjct: 423 FRSMTQDYKMTP 434
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 179/368 (48%), Gaps = 44/368 (11%)
Query: 8 LSIKELEDRFVPILQSC--ENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
++++ E +V +L +C IEL +++H+ + + + +V +ID+ + G++
Sbjct: 190 MNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVET 249
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A LF+ + +V +N +I YT+ +LY A+ L+++MLR T P+ T+ V+
Sbjct: 250 ACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-----PNDVTMLSVL 304
Query: 125 KSCAGLLCPSLGKQIHAHVCKF--GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
+CA L +G+ IH ++ K G+ + S +L+D+Y KC ++ AH+VF M +
Sbjct: 305 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKS 364
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+ +WN +I G+A G+ + D+F +M+
Sbjct: 365 LSSWNAMIFGFAMHGRADA-------------------------------SFDLFSRMRK 393
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH-LLRRTVICNALIEMYIKCGCIN 301
+GIEPD+I+ V +L AC+ G L+LG I +++ + + +I++ G
Sbjct: 394 IGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFK 453
Query: 302 QASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+A ++ + M +E D V W +++ HG A + +++ P N ++I L +
Sbjct: 454 EAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIE-PENPSSYILLSNIY 512
Query: 361 AHTGFWNE 368
A G W +
Sbjct: 513 ASAGRWED 520
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 160/357 (44%), Gaps = 36/357 (10%)
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
D L A VFE + + + + WN +I G+A + L Y +VS + + YT
Sbjct: 12 DGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTL-----YVCMVSLGLLPNSYT 66
Query: 226 ---------HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
++ E + Q+ +G + D S++ Q LE + ++
Sbjct: 67 FPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLE--DAYKVFDR 124
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
+H R V ALI Y G I A +LFD++ +DVVSW+ +I G A G +A+
Sbjct: 125 SSH--RDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALE 182
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF EM ++ V P++ T++ +LSACAH+G G S DH + ++ L+DL
Sbjct: 183 LFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQ-VHSWVDDHGFDSNLKIVNALIDLY 241
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
+ G ++ A + + + K D W +L+ T+ NL + + ++ E +
Sbjct: 242 SKCGEVETACGLFQGLSYK-DVISWNTLIGG-YTHMNLYKEALLLFQEMLRSGETPNDVT 299
Query: 457 LLSNIYA-KH------GRWEDV---SRMRKLIRSKSMKKT-----PGCSLIEVNNEV 498
+LS + A H GRW V R++ + + S++ + C IE ++V
Sbjct: 300 MLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 356
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/438 (39%), Positives = 266/438 (60%), Gaps = 32/438 (7%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
+ P FT ++K+C+ + G+ +H H+ K+G SH + AL+D YG +++EA
Sbjct: 6 VSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEAR 65
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGY-------- 224
+VF+EM++RD+ AW +IS +AR G M AR LFD+MP SW AMI GY
Sbjct: 66 RVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVES 125
Query: 225 -----------------THIGSYA------EALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
T I Y+ EAL VF +MQ GI+PDE+++ +++ ACA
Sbjct: 126 AELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAH 185
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
LG+L+LG+ IH+Y + I +ALI+MY KCG ++++ +F ++ ++++ W+++
Sbjct: 186 LGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSI 245
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I GLA HG A +A+ +F MQR K+ PN +TFI +L AC H G EG F SM RD
Sbjct: 246 IEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFS 305
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
I +IEHYGC+VDLLG+AG L+ AL ++ M M+P++ IWG+LL C+ + NL+IA +A+
Sbjct: 306 IPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQVAV 365
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT-PGCSLIEVNNEVQE 500
VLEP ++G Y LL N+YA+ RW +V+ +R ++ ++KT PG S IE++ ++ +
Sbjct: 366 NESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIEMDRKIHQ 425
Query: 501 FVSGDDTKPFLKDIFWLL 518
F + D + +I+ LL
Sbjct: 426 FAASDKSHLASDEIYTLL 443
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 163/414 (39%), Gaps = 94/414 (22%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++++C + EL + +H I KY F+ T ++D + G + A +F ++
Sbjct: 13 FSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRVFDEMS 72
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQM-----------------LRDPRTGSLIL-- 114
E +VF + MI + A L+ +M LR+ + L+
Sbjct: 73 ERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQ 132
Query: 115 --------------------------------------PDKFTLPFVIKSCAGLLCPSLG 136
PD+ T+ +I +CA L LG
Sbjct: 133 MPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLG 192
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K+IH + + G +AL+D+Y KC L ++ VF ++ +++ WN++I G A
Sbjct: 193 KEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLA-- 250
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+ GY EAL +F +MQ I+P+ ++ +SVL
Sbjct: 251 ------------------------VHGYAE-----EALAMFSRMQREKIKPNGVTFISVL 281
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGCINQASQLFDQM-VERD 314
AC G +E G + ++ + + ++++ K G + A +L M +E +
Sbjct: 282 GACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPN 341
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
V W ++GG H A +E + L+ P N + L++ A W+E
Sbjct: 342 SVIWGALLGGCKLHRNLKIAQVAVNESKVLE-PNNSGYYTLLVNMYAEVNRWSE 394
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 18/211 (8%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M + P + S++ AC+ + L GE +H + K + AL++ Y G
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
I +A ++FD+M ERDV +W+T+I A G A LF EM N ++ ++
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMP----VRNTASWNAMIDG 116
Query: 360 CAHTGFWNEGLMYFDSM-KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP---MK 415
+ + F M RD I + ++ + + +AL + EM +
Sbjct: 117 YSRLRNVESAELLFSQMPNRD------IISWTTMIACYSQNKQFREALAVFNEMQTNGID 170
Query: 416 PDAKIWGSLLSSCRTYSNL----EIAVIAME 442
PD +++S+C L EI + AME
Sbjct: 171 PDEVTMATIISACAHLGALDLGKEIHLYAME 201
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 174/416 (41%), Positives = 257/416 (61%), Gaps = 4/416 (0%)
Query: 111 SLILPDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDE 167
S + P+ T ++ C S L +H + CK GL ++H + A++ +Y K
Sbjct: 56 SGVEPNHITFIALLSGCGDFPSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGH 115
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+ +A VF+ M D + V WN +I GY R GQ+ A +FDKMP ++SWTAMI+G+
Sbjct: 116 VKKARLVFDYMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKK 175
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
G + EAL FR+MQ+ G+ PD ++I++ L AC LG+L G W+H Y +
Sbjct: 176 GFHEEALVWFREMQISGVRPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVS 235
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
N+LI++Y +CGC+ A ++FD+M +R VVSW++VI G A +G AH+++ F +MQ
Sbjct: 236 NSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFK 295
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+ +TF G L+AC+H G EGL YF +MKRD+ I +IEHYGCLVDL RAGRL+ AL
Sbjct: 296 PDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALK 355
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEI-AVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
+IE MPMKP+ + GSLL++CRT+ N + A M+HL L + NYV+LSN+YA G
Sbjct: 356 VIESMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADG 415
Query: 467 RWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+WE S+MR+ ++ +KK PG S IE+++ F++GD I +LEL++
Sbjct: 416 KWEGASQMRRKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETAIIREVLELVS 471
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 144/343 (41%), Gaps = 76/343 (22%)
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL--GSLELGEW 270
T VSWT+ I+ T G AEA F M++ G+EP+ I+ +++L C GS L
Sbjct: 26 TTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGSETLSNL 85
Query: 271 IHMYC-----DKNHLLRRTVIC---------------------------NALIEMYIKCG 298
+H Y D+ H++ T I N +I+ Y++ G
Sbjct: 86 LHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSG 145
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
++ A ++FD+M ERD++SW+ +I G G +A+ F EMQ V P+ + I L+
Sbjct: 146 QVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALN 205
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP----- 413
AC + G + GL + + ++ + L+DL R G ++ A + ++M
Sbjct: 206 ACTNLGALSFGL-WVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVV 264
Query: 414 -----------------------------MKPDAKIWGSLLSSCRTYSNLEIAV---IAM 441
KPDA + L++C +E + M
Sbjct: 265 SWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTM 324
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+ + P +Y L ++Y++ GR ED K+I S MK
Sbjct: 325 KRDYGISPR-IEHYGCLVDLYSRAGRLEDA---LKVIESMPMK 363
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 37/275 (13%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ Y+ ++ MID G + A +F ++ E ++ + AMI + + A
Sbjct: 122 VFDYMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEA 181
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + + +C L S G +H +V K++ N
Sbjct: 182 LVWFREM-----QISGVRPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSN 236
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
+L+DLY +C + A +VF++M R +V+WN++I G+A
Sbjct: 237 SLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFA---------------------- 274
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
+G H E+L FR+MQ G +PD ++ L AC+ +G +E G
Sbjct: 275 ----ANGNAH-----ESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMK 325
Query: 277 KNHLLR-RTVICNALIEMYIKCGCINQASQLFDQM 310
+++ + R L+++Y + G + A ++ + M
Sbjct: 326 RDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESM 360
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
Q +Q VSW++ I L +G+ +A F +M+ V PN ITFI LLS C
Sbjct: 17 QRLNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCG 73
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 311/525 (59%), Gaps = 24/525 (4%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG-GDLAYASLLF 69
+ L + IL +L +LK++ + + SQ++F K+I C+ +L YA +F
Sbjct: 3 RNLNELVTTILTKINHLNQLKQLQSHLTTLGHSQTHFYAFKLIRFCSLNLSNLHYAHQIF 62
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ PN++L+ A+I A+++ L+K ML S I P+ F P V+KS
Sbjct: 63 NHIHSPNIYLFTAIITAFSSQQ--HTTFKLFKTMLN-----SNIRPNNFIYPHVLKSVKE 115
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC-DELIEAHKVFEEMTDRDIVAWNN 188
L +HA + K G ++ + E +L+D Y K L +AHKVF+EM++R+IV +
Sbjct: 116 RFLVDL---VHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTV 172
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV----- 243
L+SGY R+G ++K M+FD+M + +W A+ISG T G ++E + +FR+M
Sbjct: 173 LVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGE 232
Query: 244 -----GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
G +P+++++V VL AC G L+LG+WIH Y ++ + + + NAL++MY KCG
Sbjct: 233 GGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCG 292
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK--VPPNDITFIGL 356
+ A ++F+ + + SW+++I A HGK AI F +M V P+++TFIGL
Sbjct: 293 SLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGL 352
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
L+AC H G +G YF+ M +++ IE +I HYGCL+DLLGRAG+ D+A+++++ M M+P
Sbjct: 353 LNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEP 412
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
D +WGSLL+ C+ + ++A A + L+ ++P + G +L+NIY + G+W+++ +
Sbjct: 413 DEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWS 472
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
++ + K PGCS IEV+++V +F S D + P ++++ +LE L
Sbjct: 473 KLKQQKSYKIPGCSWIEVDDKVHQFFSLDQSNPKTEELYNILESL 517
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 307/559 (54%), Gaps = 54/559 (9%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA------YASLLFKQVKE 74
L+ C+ L +LK++H QI K L Q +TK++ N+G ++A YA F+ KE
Sbjct: 32 LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLV---NAGAEIASPESLDYARKAFELFKE 88
Query: 75 P-----NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+F+ N++IR Y++ L AI LY +ML T P+ +T PFV+ C
Sbjct: 89 DVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVT-----PNHYTFPFVLSGCTK 143
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
+ G Q+H V K GL+ +N L+ Y +C + HKVFE M++R++V+W +L
Sbjct: 144 IAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSL 203
Query: 190 ISGYAR-----------------------------LGQMKKARMLFDKMPYTTIVSWTAM 220
I GYAR G + A+ LFD+ +V + +
Sbjct: 204 ICGYARGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTI 263
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL-----GSLELGEWIHMYC 275
+S Y G EAL + +M G PD ++++S + A AQL G + G W+H Y
Sbjct: 264 LSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYI 323
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
+KN + + AL++M+ +CG A Q+F++M ERDV +W+ IG +A G A
Sbjct: 324 EKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGAT 383
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
LF++M V P+ + F+ +L+AC+H G +GL F S+ DH I +IEHYGC+VDL
Sbjct: 384 GLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDL 442
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGRAG L +A ++I+ MPM+P+ +WGSLL++CR + N+E+A A E + L P+ G +
Sbjct: 443 LGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVH 502
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
VLLSNIYA G+W DV+R+R +R K ++K PG S ++VN + EF SGD++ P + I
Sbjct: 503 VLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIA 562
Query: 516 WLLELLALHQDRAKDVIDI 534
+L+ + A + D+
Sbjct: 563 LMLQEMNCRFSDAGHIPDL 581
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/492 (37%), Positives = 286/492 (58%), Gaps = 5/492 (1%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H L+ L F+ ++ S G L + F ++ + NV +N+MI Y
Sbjct: 134 VHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGD 193
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
+L+ +M R L D+FTL ++ +C+ +G+ +H + G +
Sbjct: 194 TREVCSLFGEMRRQG-----FLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDL 248
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
I E+AL+D+YGKC +L A + FE M + +V+W +++ + G + AR FD MP
Sbjct: 249 ILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPER 308
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
IVSW AMIS Y G EALD++ QMQ G+ PDEI++V+VL A ++G L +G+ +H
Sbjct: 309 NIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVH 368
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+Y N + N+L++MY KCG ++ A LF +M R+VVSW+ +IGGLA HG+A
Sbjct: 369 LYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRAL 428
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
I F M P+ ITF+ LLSAC+H G G YF+SM+ ++++H++EHY C+
Sbjct: 429 DTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACM 488
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VDLLGR G L++A+ +I+EMPMKPD +WG+LL +CR + N++I ++ LL LE
Sbjct: 489 VDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISG 548
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLK 512
G +VL+SN+ + +WED+ R+RKL++ +K G S IE+NN + EF D
Sbjct: 549 GLFVLISNLLYETHQWEDMKRLRKLMKEWGTRKDMGVSSIEINNSIHEFGVEDIRHERSS 608
Query: 513 DIFWLLELLALH 524
+I+ +++ L+ H
Sbjct: 609 EIYAVVDQLSYH 620
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 201/427 (47%), Gaps = 71/427 (16%)
Query: 20 ILQSCENLIELKKIHTQILKY--LLSQSNFLVTKMIDVCNSG-GDLAYASLLFKQVKEPN 76
+L+ C ++ L ++H +L + L + S+ L+ + +G G L +A LF + P+
Sbjct: 17 LLRQCRSIQRLNQLHAHLLVHGSLSAASDLLLASYCALAKAGHGVLCHARRLFDGIPGPD 76
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+YN +IRAY N+ A+ L++ MLR ILP++FTLPFV+K+C
Sbjct: 77 RVMYNTIIRAYCNSSCPREALRLHRGMLRRG-----ILPNEFTLPFVVKACTIAQAREHA 131
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+H + GL NALL Y L ++ + F+EM DR++V+WN++I GYA+
Sbjct: 132 LAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQA 191
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + E +F +M+ G DE ++VS+L
Sbjct: 192 GDTR-------------------------------EVCSLFGEMRRQGFLEDEFTLVSLL 220
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC------------------- 297
AC+Q G+LE+G +H + ++ +AL++MY KC
Sbjct: 221 IACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVV 280
Query: 298 ------------GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
G +N A FD M ER++VSW+ +I G+ H+A+ L+++MQ
Sbjct: 281 SWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQG 340
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
+ P++IT + +LSA G G M + RD+ + L+D+ + G++D A
Sbjct: 341 LAPDEITLVAVLSASGRIGDLTVGKMVHLYI-RDNIYNPDVSLVNSLLDMYAKCGQVDTA 399
Query: 406 LNIIEEM 412
+++ EM
Sbjct: 400 ISLFSEM 406
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + AR LFD +P V + +I Y + EAL + R M GI P+E ++ V+
Sbjct: 60 GVLCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVV 119
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC + E +H + L+ + + NAL+ Y G + + + FD+MV+R+VV
Sbjct: 120 KACTIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVV 179
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-LMYFDS 375
SW+++IGG A G + LF EM+R ++ T + LL AC+ G G L++
Sbjct: 180 SWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRM 239
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
+ ++ +E LVD+ G+ G L A E MP+K W S+L + + ++
Sbjct: 240 LVSGSRVDLILE--SALVDMYGKCGDLWMARRCFEMMPIKSVVS-WTSMLCAQTKHGSVN 296
Query: 436 IAVIAMEHL 444
A +H+
Sbjct: 297 AARCWFDHM 305
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/369 (46%), Positives = 250/369 (67%), Gaps = 2/369 (0%)
Query: 152 SITENALLDLYGK--CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+ + AL+D YGK + A ++F++MT+RD+V WN++I GYAR G+M +AR LF++M
Sbjct: 212 AFSWGALIDGYGKQGGAGVDRARELFDQMTERDLVCWNSMIDGYARHGRMDEARSLFEEM 271
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P ++SW+ +I G+ G EAL+ F+ M GI PD ++ V + ACAQLG+LE G
Sbjct: 272 PERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAVSACAQLGALEQGR 331
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
W+H Y +K +L V+ ALI+MY+KCG ++ A +F+ M ER VV+W+ +I GL HG
Sbjct: 332 WLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHG 391
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
A+ LFH M+ +V +D++ + +L+AC H G +EGL F MK+D I+ K+EHY
Sbjct: 392 YGLDAVMLFHRMEAERVAVDDLSLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHY 451
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
G LVDLLGRAGRLDQA + IE MPM+P ++WGSLL++CR++S +E+A +++E L L
Sbjct: 452 GALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSHSCVELAELSVERLANLGA 511
Query: 450 EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
+D+G YVLLSNIYA G W DV R+RKL+ + M+K G S+IEV+ E+ EFV+G +
Sbjct: 512 DDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVNGGGSHL 571
Query: 510 FLKDIFWLL 518
+I+ +L
Sbjct: 572 CTDEIYLML 580
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 167/364 (45%), Gaps = 55/364 (15%)
Query: 60 GDLAYASLLFKQVKEP---NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPD 116
G A +F ++ EP + F +N IR + A LY +R + PD
Sbjct: 59 GAAPLADAVFARLPEPAARDPFPWNTAIRLHAPGRPR--AALLYFARMRS----CGVRPD 112
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
+T P V+K+C G +HA + GL + T NAL+ Y + + I KVF+
Sbjct: 113 AYTFPAVLKACGCAPGCRAGLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFD 172
Query: 177 EM--TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA--E 232
E RD+V+WN++++GY G+M A+ LFD+MP SW A+I GY G
Sbjct: 173 EAGGVSRDLVSWNSMVAGYVGCGEMGLAQELFDEMPQRDAFSWGALIDGYGKQGGAGVDR 232
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALI 291
A ++F QM R ++C N++I
Sbjct: 233 ARELFDQMT----------------------------------------ERDLVCWNSMI 252
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
+ Y + G +++A LF++M ER+V+SWS VI G G+A +A+ F M R + P+ +
Sbjct: 253 DGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRV 312
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
+G +SACA G +G +++ + + L+D+ + GR+D A+ I E
Sbjct: 313 AAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTA-LIDMYMKCGRMDLAMLIFES 371
Query: 412 MPMK 415
MP +
Sbjct: 372 MPER 375
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
MID G + A LF+++ E NV ++ +I + A+ ++ MLR
Sbjct: 249 NSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLR---- 304
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I PD+ + +CA L G+ +H+++ K + S + + AL+D+Y KC +
Sbjct: 305 -CGIRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMD 363
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYT 225
A +FE M +R +V WN +I G G A MLF +M + +S AM++ T
Sbjct: 364 LAMLIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDDLSLLAMLTACT 423
Query: 226 HIGSYAEALDVFRQMQM-VGIEP 247
H G +E L++F +M+ GI+P
Sbjct: 424 HAGLVSEGLEIFHRMKKDFGIDP 446
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 18 VPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V + +C L L++ +H+ + K + + T +ID+ G + A L+F+ + E
Sbjct: 315 VGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPE 374
Query: 75 PNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLL 131
+V +N MI H YGL A+ L+ +M + D +L ++ +C AGL+
Sbjct: 375 RSVVTWNVMIVGL-GTHGYGLDAVMLFHRM-----EAERVAVDDLSLLAMLTACTHAGLV 428
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
L + H FG+ AL+DL G+ L +A E M
Sbjct: 429 SEGL-EIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETM 474
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 302/539 (56%), Gaps = 42/539 (7%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMID-VCNSGGDLAYASLLFKQVKEPNVFL 79
LQSC++ +LKKIH Q++ + F+ TK ++ S ++ YA +F + P+ +
Sbjct: 34 LQSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSYS 93
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL--GK 137
+ MIR + A+ Y M + + +KFT FV+K+ L PS G+
Sbjct: 94 WTTMIRGFVEAKNPEKALEFYGLMRQRG-----VELNKFTFLFVLKAYG--LRPSYQEGR 146
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG----- 192
+H + K G T NAL+ +Y KC + +AH +F+EM + ++V WN +I+G
Sbjct: 147 IVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCG 206
Query: 193 --------------------------YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
Y++LG + AR LFD MP +VSW +MIS Y
Sbjct: 207 DTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQ 266
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
G AEAL++F++M + G+ D I I S+L ACAQ+G+L++G WIH Y ++ L +
Sbjct: 267 NGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFL 326
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
AL++MY KCGCI+ A +F+ M +++ SW+ ++ GLA HG A+ LF +M+ V
Sbjct: 327 DTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGV 386
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
PNDITF+ +LSAC+H G EG F+ M ++ +I K+EHYGC+VD+L R G +++A
Sbjct: 387 GPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAK 446
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
+I MP++P+ IWG+LL++C+ + + + ++ L ED G YVLLSNI+A
Sbjct: 447 EMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKS 506
Query: 467 RWEDVSRMRKLIRSKSM-KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
+W +V + RK+++ + KK PG S IE+++ V +F + D +++ ++E L H
Sbjct: 507 QWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVVHDFFAEDRLHSKWREVSTVIERLNTH 565
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/503 (38%), Positives = 297/503 (59%), Gaps = 7/503 (1%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F +L L L++IH Q++ LS + L +I + A +LF P+
Sbjct: 77 FSLLLNQRPKLSPLQQIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPS 136
Query: 77 --VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCP 133
+ L+N MIR Y+ I+L+ +ML G + ++PD++T FVI SC+ +
Sbjct: 137 PPIKLWNVMIRTYSKIRNSQEPIHLFLRMLT--LDGPMQVVPDEYTFTFVITSCSHQISL 194
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+ +H V K G +S+ N+++++ + +A KVF +M++RD+ +W +L+ GY
Sbjct: 195 IYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGY 254
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISI 252
A+ G+M +A LF+ MP VSW MISG+ G Y EAL F M + P+E +
Sbjct: 255 AKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVL 314
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V VL ACA LG+L+ G WIH+Y DK + + + I ALI+MY KCG I+ AS++F+ + +
Sbjct: 315 VCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICK 374
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
RDV+S++++I GL+ HG A+ +F++M V PN+IT +G+L+ C+H+G EG
Sbjct: 375 RDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSI 434
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
+M+ I KIEHYGC +DLLGRAG L++AL +++ MPM+PD IW +LLS+ R +
Sbjct: 435 LANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHH 494
Query: 433 NLEIAVIAMEHLLVLEPED-TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+ + + H+ L+ D G VLLSN+YA GRWE V+ MRKL+ + + +PGCS
Sbjct: 495 NVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSW 554
Query: 492 IEVNNEVQEFVSGDDTKPFLKDI 514
IEVN V EF D P + +I
Sbjct: 555 IEVNGLVHEFRVADQLHPQIVEI 577
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 300/509 (58%), Gaps = 10/509 (1%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKE 74
+ +L++C ++ E K+I + LSQ + ++++ +S GD+ ++ +F Q+
Sbjct: 15 LIALLENCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPS 74
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
P + +N++IR ++ +++++ +MLR + PD T PF+ K+ A L
Sbjct: 75 PTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFG-----VCPDHLTYPFIAKAVARLSELR 129
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
L +H + K GL N+L+ +YG C ++ A KVF+EM R+ V+WN ++ GYA
Sbjct: 130 LALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYA 189
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+ G + AR +F+ MP +VSW++MI G G Y AL +F +M++VG + +E+++VS
Sbjct: 190 KCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANEVTMVS 249
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD--QMVE 312
VL ACA LG+LE G +H Y N + V+ +L++MY KCG I +A +F M +
Sbjct: 250 VLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQ 309
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
DV+ W+T+IGGLA HG H+++ LF EMQ L + P++IT++ L SACAH G +E +
Sbjct: 310 TDVLMWNTIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHF 369
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F S+ + + K EHY C+VD+L RAG+L +A + I +MPM+P A + G+LL+ C +
Sbjct: 370 FKSLGKQGMVP-KSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHR 428
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
++A L+ LEP+ G Y+ LSN+YA W++ MR+ + + +KK+PG S +
Sbjct: 429 RFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFV 488
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
EV + F++ D T L+ I+ +L +
Sbjct: 489 EVLGTLHRFIAHDKTHNDLEKIYMMLNTI 517
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 188/501 (37%), Positives = 285/501 (56%), Gaps = 14/501 (2%)
Query: 28 IELKKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+ IH +LK LL L T ++ + G +A LF ++ E + AM RA
Sbjct: 27 LSASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARA 86
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL----GKQIHAH 142
+ + AI ++ M+ D + PD L + +C G + GK+IHA
Sbjct: 87 HVASGQAAQAIAVFGDMVADG-----VFPDNVALAVALGACHGAGSWTARRNPGKKIHAL 141
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
+ G++ L+ +YG+C +L + +VF++M R + WN ++ YAR G++ A
Sbjct: 142 IVTSGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTA 201
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM---QMVGIEPDEISIVSVLPAC 259
LF MP +VSW +++GY G EAL +FRQM + P+ ++ ++L AC
Sbjct: 202 YELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGAC 261
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERDVVSW 318
A G LE G W+H Y ++N + + LI+MY KCG I+ A Q+F++ +RD+ SW
Sbjct: 262 AGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKRDLFSW 321
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+TVI GLA HG+A A+ +F MQ + P+D+T +G+L+ACAH G +EGL YF SM+
Sbjct: 322 TTVICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEA 381
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
I KIEHYGC++DLLGR GRL +A ++I MPM P+ IWG+ LS+C+ + N+E+
Sbjct: 382 KFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGK 441
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
IA E L L+P+D V+LS++YAK W ++R R+ + S +KKTPGCS IE+ EV
Sbjct: 442 IAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEV 501
Query: 499 QEFVSGDDTKPFLKDIFWLLE 519
EFV+G P +I +L+
Sbjct: 502 HEFVAGGSQHPQYAEICSVLQ 522
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 314/571 (54%), Gaps = 77/571 (13%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV--- 77
++ C+NL ++IH Q++ L +F+ +K+++ + Y +++ N
Sbjct: 12 IKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEF--FANFVEYGDYACDYLEQGNTRLG 69
Query: 78 -FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
F +N++I Y +A+++Y++M+RD +PD FT P ++K+C+ G
Sbjct: 70 SFPFNSLINGYVGGEFPQMAVSVYRRMVRDG-----FVPDMFTFPVLLKACSNFSGSREG 124
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+Q+H V K GL + +N+L+ YG C + A KVF+EM RD+V+WN+LISG+ +
Sbjct: 125 RQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKA 184
Query: 197 GQMKKARMLFDKM----PYTTIVS-------------------------------WTAMI 221
G +A +F +M TT+VS AM+
Sbjct: 185 GHFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAML 244
Query: 222 SGYTHIGSYAEA-------------------------------LDVFRQMQMVGIEPDEI 250
Y G + EA L++F M+ +GI PD I
Sbjct: 245 DMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAI 304
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ SVL ACA LG+L+ G W+H Y ++ + I A+++MY KCGCI A ++F M
Sbjct: 305 ILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSM 364
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+R+ +W+ ++ GLA HG H+A++LF M V PN+ITF+ +L+AC H G +EG
Sbjct: 365 SQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGR 424
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
YFD+M + +++ K+EHYGC++DL RAG L++A+ + MPMKPD IWG LL++C T
Sbjct: 425 KYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTT 484
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
N+E++ +++L L+ +D+G +VLLSNI A + RW +V+R+R+L++ + ++K PG S
Sbjct: 485 VGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSS 544
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+IEV+ + EFV GD + ++I+ +L L+
Sbjct: 545 VIEVDGKAHEFVVGDISHLQTEEIYKVLNLI 575
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 150/363 (41%), Gaps = 73/363 (20%)
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
K+ L IK C L + +QIHA + GL + +++ + F
Sbjct: 5 KWVLLDSIKDCKNL---RIFRQIHAQLVTSGLVYDDFVTSKVMEFFAN----------FV 51
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE-ALD 235
E D A + L G RLG P+ + +I+GY G + + A+
Sbjct: 52 EYGD---YACDYLEQGNTRLGSF----------PFNS------LINGYVG-GEFPQMAVS 91
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
V+R+M G PD + +L AC+ G +H K LL + N+LI Y
Sbjct: 92 VYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYG 151
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
CG + A ++FD+M+ RDVVSW+++I G G +AI +F R+ V P+ T +
Sbjct: 152 ACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFF---RMDVEPSMTTLVS 208
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+L+ACA G G ++R + + + ++D+ + G +A NI +E+P +
Sbjct: 209 VLAACARNGDLCTGKGIHGVIERRFKVNLVLGN--AMLDMYVKNGCFYEAKNIFDELPTR 266
Query: 416 ----------------------------------PDAKIWGSLLSSCRTYSNLEIAVIAM 441
PDA I S+LS+C + L+
Sbjct: 267 DIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVH 326
Query: 442 EHL 444
E++
Sbjct: 327 EYI 329
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 46/330 (13%)
Query: 18 VPILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V +L +C +L K IH +++ + L M+D+ G A +F ++
Sbjct: 207 VSVLAACARNGDLCTGKGIH-GVIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPT 265
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
++ + MI + ++ L+ M RT I PD L V+ +CA L
Sbjct: 266 RDIVSWTIMITGLVQSDHPKQSLELFSMM----RTLG-ISPDAIILTSVLSACASLGTLD 320
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G +H ++ + G+K A++D+Y KC + A K+F M+ R+ WN L+ G A
Sbjct: 321 FGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLA 380
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+ G H EAL++F M + G++P+EI+ ++
Sbjct: 381 --------------------------MHGLVH-----EALNLFEVMIISGVKPNEITFLA 409
Query: 255 VLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VE 312
+L AC G ++ G ++ +LL + +I+++ + G + +A +L M ++
Sbjct: 410 ILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMK 469
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
DV+ W ++ G I L H +Q
Sbjct: 470 PDVLIWGLLLNACTTVGN----IELSHRIQ 495
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 187/502 (37%), Positives = 290/502 (57%), Gaps = 5/502 (0%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
+LK L + + I + S GD+ A +F + ++ +N +I Y
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
AI +YK M + + PD T+ ++ SC+ L + GK+ + +V + GL+
Sbjct: 241 AIYVYKLMESEG-----VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
NAL+D++ KC ++ EA ++F+ + R IV+W +ISGYAR G + +R LFD M +V
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
W AMI G +AL +F++MQ +PDEI+++ L AC+QLG+L++G WIH Y
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
+K L + +L++MY KCG I++A +F + R+ ++++ +IGGLA HG A AI
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 475
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
F+EM + P++ITFIGLLSAC H G G YF MK ++ +++HY +VDL
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 535
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGRAG L++A ++E MPM+ DA +WG+LL CR + N+E+ A + LL L+P D+G Y
Sbjct: 536 LGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIY 595
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
VLL +Y + WED R R+++ + ++K PGCS IEVN V EF+ D ++P + I+
Sbjct: 596 VLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIY 655
Query: 516 WLLELLALHQDRAKDVIDIMYE 537
L L H + V+ YE
Sbjct: 656 DRLHCLGRHMRSSLSVLFSEYE 677
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 210/430 (48%), Gaps = 67/430 (15%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFK 70
L + + +L+ C+ L+ LK+I Q++ L F +++I C + L Y+ + K
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ PN+F +N IR ++ + + LYKQMLR S PD FT P + K CA L
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESR--PDHFTYPVLFKVCADL 169
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
SLG I HV K L+ S NA + ++ C ++ A KVF+E RD+V+WN LI
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+GY ++G+ +K A+ V++ M+ G++PD++
Sbjct: 230 NGYKKIGEAEK-------------------------------AIYVYKLMESEGVKPDDV 258
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+++ ++ +C+ LG L G+ + Y +N L + NAL++M+ KCG I++A ++FD +
Sbjct: 259 TMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL 318
Query: 311 VERDVVSWSTVIGGLANHG-------------------------------KAHKAIHLFH 339
+R +VSW+T+I G A G + A+ LF
Sbjct: 319 EKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
EMQ P++IT I LSAC+ G + G+ +++ + + + LVD+ +
Sbjct: 379 EMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSLVDMYAKC 437
Query: 400 GRLDQALNII 409
G + +AL++
Sbjct: 438 GNISEALSVF 447
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 12/287 (4%)
Query: 150 SHS-ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML--- 205
+HS + N LL L KC L+ ++ +M ++ S + ++R L
Sbjct: 47 THSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYS 106
Query: 206 ---FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI---EPDEISIVSVLPAC 259
+ I SW I G++ + E+ +++QM G PD + + C
Sbjct: 107 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 166
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A L LG I + K L + + NA I M+ CG + A ++FD+ RD+VSW+
Sbjct: 167 ADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN 226
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I G G+A KAI+++ M+ V P+D+T IGL+S+C+ G N G +++ +K +
Sbjct: 227 CLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK-E 285
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + I L+D+ + G + +A I + + + W +++S
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVS-WTTMIS 331
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 20/236 (8%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
IH I KY LS + L T ++D+ G+++ A +F ++ N Y A+I +
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 470
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHV-CKFGLKSH 151
AI+ + +M+ + I PD+ T ++ +C G+ + + +F L
Sbjct: 471 ASTAISYFNEMI-----DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQ 525
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLISGYARLGQM----KKARMLF 206
+ ++DL G+ L EA ++ E M + D W L+ G G + K A+ L
Sbjct: 526 LKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLL 585
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
+ P + + + + Y + +A R M G+E +P C+ +
Sbjct: 586 ELDPSDSGI-YVLLDGMYGEANMWEDAKRARRMMNERGVEK--------IPGCSSI 632
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 292/497 (58%), Gaps = 9/497 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ L +C L L K++H Q+++ L ++ + M+++ G A +F ++
Sbjct: 297 YTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLR 356
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ N + +I + + ++ L+ QM L+ D+F L +I C+ +
Sbjct: 357 DRNTVSWTVLIGGFLQYGCFSESLELFNQM-----RAELMTVDQFALATIISGCSNRMDM 411
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
L +Q+H+ K G + N+L+ +Y KC L A +F M +RDIV+W +++ Y
Sbjct: 412 CLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAY 471
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISI 252
+++G + KAR FD M +++W AM+ Y G+ + L ++ M + PD ++
Sbjct: 472 SQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTY 531
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V++ CA +G+ +LG+ I + K L+ T + NA+I MY KCG I++A ++FD +
Sbjct: 532 VTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSR 591
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+D+VSW+ +I G + HG +AI +F +M + P+ I+++ +LS+C+H+G EG Y
Sbjct: 592 KDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFY 651
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
FD +KRDH++ +EH+ C+VDLL RAG L +A N+I+EMPMKP A++WG+LLS+C+T+
Sbjct: 652 FDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHG 711
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N E+A +A +HL L+ D+G Y+LL+ IYA G+ D +++RKL+R K +KK PG S +
Sbjct: 712 NNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWM 771
Query: 493 EVNNEVQEFVSGDDTKP 509
EV N+V F + D + P
Sbjct: 772 EVKNKVHVFKAEDVSHP 788
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 193/421 (45%), Gaps = 21/421 (4%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L+ A LF ++ +V +N ++ Y + + A+ + M R + LP+ FT
Sbjct: 109 GSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDS----LPNAFT 164
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+KSC L + Q+ + KFG + ++D++ +C + A K F ++
Sbjct: 165 FGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIE 224
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+ N++++GYA+ + A LF+ MP +VSW M+S + G EAL V
Sbjct: 225 RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVD 284
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M G+ D + S L ACA+L SL G+ +H ++ + +A++E+Y KCGC
Sbjct: 285 MHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGC 344
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+A ++F + +R+ VSW+ +IGG +G +++ LF++M+ + + ++S
Sbjct: 345 FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISG 404
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHY------GCLVDLLGRAGRLDQALNIIEEMP 413
C++ M ++ H + K H L+ + + G L A +I M
Sbjct: 405 CSNR-------MDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSME 457
Query: 414 MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSR 473
+ D W +L++ YS + A E + + + + Y +HG ED +
Sbjct: 458 ER-DIVSWTGMLTA---YSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLK 513
Query: 474 M 474
M
Sbjct: 514 M 514
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 154/355 (43%), Gaps = 61/355 (17%)
Query: 48 LVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RD 106
+ T ++D+ G + +AS F Q++ P VF N+M+ Y ++ A+ L++ M RD
Sbjct: 199 VATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERD 258
Query: 107 PRTGSLILP-------------------------DKFTLPFVIKSCAGLLCPSLGKQIHA 141
+ ++++ D T + +CA L GKQ+HA
Sbjct: 259 VVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHA 318
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
V + +A+++LY KC EA +VF + DR+ V+W LI G+ +
Sbjct: 319 QVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQY----- 373
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
G ++E+L++F QM+ + D+ ++ +++ C+
Sbjct: 374 --------------------------GCFSESLELFNQMRAELMTVDQFALATIISGCSN 407
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
+ L +H K+ R VI N+LI MY KCG + A +F M ERD+VSW+ +
Sbjct: 408 RMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGM 467
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+ + G KA F M V IT+ +L A G +GL + +M
Sbjct: 468 LTAYSQVGNIGKAREFFDGMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSAM 518
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 126/276 (45%), Gaps = 33/276 (11%)
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE-E 177
L ++SC + + +H + GL S +N LL Y C L +A + +
Sbjct: 30 ALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGD 89
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
+T+ +++ N +++GYA+LG + A LF +MP + SW ++SGY G + +A++ F
Sbjct: 90 ITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESF 149
Query: 238 RQMQMVGIE-PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
M+ G P+ + + +C LG E+ + K + +++M+++
Sbjct: 150 VSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVR 209
Query: 297 CGCINQAS-------------------------------QLFDQMVERDVVSWSTVIGGL 325
CG ++ AS +LF+ M ERDVVSW+ ++ L
Sbjct: 210 CGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSAL 269
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+ G+A +A+ + +M V + T+ L+ACA
Sbjct: 270 SQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACA 305
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 34/151 (22%)
Query: 288 NALIEMYIKCGC--------------------------------INQASQLFDQMVERDV 315
N L+ Y+ CG ++ A +LF +M RDV
Sbjct: 67 NTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDV 126
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP-PNDITFIGLLSACAHTGFWNEGLMYFD 374
SW+T++ G G+ A+ F M+R PN TF + +C G W+E +
Sbjct: 127 TSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALG-WHEVALQLL 185
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
+ + + +VD+ R G +D A
Sbjct: 186 GLLTKFGFQGDPDVATGIVDMFVRCGAVDFA 216
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 180/508 (35%), Positives = 290/508 (57%), Gaps = 8/508 (1%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L++C + ++ H ++K Q F+ ++ S G L + F ++ + N
Sbjct: 120 VLKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRN 179
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +N MI Y A L+ +M +L D FTL ++ +C+ +G
Sbjct: 180 VVSWNTMIGGYAQAGEVSEACALFGEMRHQG-----LLADVFTLVSLLFACSSEGNLEVG 234
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ +H H+ G + I NALLD+YGKC +L AH+ F+ M +++V W +++ A+
Sbjct: 235 RLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKH 294
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + R F++MP IVSW AMIS Y G E LD++ +M+ +GI PDE ++ VL
Sbjct: 295 GSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVL 354
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC Q G L G+ IH Y N + N+L++MY +CG ++ A LF +M ++V+
Sbjct: 355 SACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVI 414
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+ +IG LA HG+A + + F M P++ITF+GLLSAC+H G G YF++M
Sbjct: 415 SWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAM 474
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
R +++E ++EHYGC+VDLLGR G L +A+N+I++M +KPD +WG+LL +CR + N+EI
Sbjct: 475 ARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEI 534
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ ++ LL LE G +VL+ N++ + +WED+ ++RKL++ + KK G S IEV N
Sbjct: 535 GKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKN 594
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLALH 524
+ EF D +I+ ++ L+ H
Sbjct: 595 IIHEFGVEDLRHESTNEIYAAVDQLSYH 622
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 208/433 (48%), Gaps = 74/433 (17%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI-DVCN-SGGD----LAYASLLFKQVK 73
+L+ C ++ L +IH ++ + S + + +++I C S GD L +A LF ++
Sbjct: 16 LLRQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDRIP 75
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
EP+ F+YN ++RAY+N+ A+ L++ +L+ ILP++FTLPFV+K+C +
Sbjct: 76 EPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRG-----ILPNEFTLPFVLKACTTVRAV 130
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
H V K G NALL + L ++ + F EM DR++V+WN +I GY
Sbjct: 131 EHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGY 190
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G++ +EA +F +M+ G+ D ++V
Sbjct: 191 AQAGEV-------------------------------SEACALFGEMRHQGLLADVFTLV 219
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD----- 308
S+L AC+ G+LE+G +H + + ++ NAL++MY KCG + A + FD
Sbjct: 220 SLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIK 279
Query: 309 --------------------------QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
QM ER++VSW+ +I G+ H+ + L++ M+
Sbjct: 280 NVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMR 339
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
L + P++ T G+LSAC G G M RD+ + + L+D+ R G++
Sbjct: 340 SLGITPDEFTLAGVLSACGQNGDLASGKM-IHCYVRDNFNDPGVTLLNSLLDMYARCGQV 398
Query: 403 DQALNIIEEMPMK 415
D A+ + EMP K
Sbjct: 399 DTAIGLFTEMPNK 411
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 162/342 (47%), Gaps = 25/342 (7%)
Query: 153 ITENALLDLYGKCDEL-----IEAHKVFEEMTDRDIVAWNNLISGYARL------GQMKK 201
+ +L+L +C + I AH V +D VA + LI+ Y L G +
Sbjct: 8 VASRHVLELLRQCRSIQHLDQIHAHLVVHGFSDVSSVA-SQLIASYCTLSAGDRDGGLCH 66
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
AR LFD++P + ++ Y++ EAL + R + GI P+E ++ VL AC
Sbjct: 67 ARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTT 126
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
+ ++E H K +++ + NAL+ + G + + + F +M +R+VVSW+T+
Sbjct: 127 VRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTM 186
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDH 380
IGG A G+ +A LF EM+ + + T + LL AC+ G G L++ +
Sbjct: 187 IGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGS 246
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
++ + + L+D+ G+ G L A + MP+K + W S+L + + +++
Sbjct: 247 RVDRILGN--ALLDMYGKCGDLWMAHRCFDMMPIK-NVVTWTSMLCAQAKHGSVDAVRDW 303
Query: 441 MEHLLVLEPE-DTGNYVLLSNIYAKHGRWEDV----SRMRKL 477
E + PE + ++ + + Y + GR + +RMR L
Sbjct: 304 FEQM----PERNIVSWNAMISCYVQCGRLHETLDLYNRMRSL 341
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 181/472 (38%), Positives = 281/472 (59%), Gaps = 46/472 (9%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G +A A +F ++ +V +NAMI Y A+ L+K+M++
Sbjct: 173 TALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK---- 228
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ V+ +CA LG+Q+H+ + G S+ NAL+DLY KC
Sbjct: 229 -TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKC---- 283
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LF+ + Y ++SW +I GYTH+
Sbjct: 284 ---------------------------GEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 316
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
Y EAL +F++M G P++++++S+LPACA LG++E+G WIH+Y +K R + NA
Sbjct: 317 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK----RLKGVANA 372
Query: 290 ------LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
LI+MY KCG I A Q+FD ++ R + SW+ +I G A HG+A+ A +F M++
Sbjct: 373 SSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
++ P+DITF+GLLSAC+H+G + G F SMK D+ I K+EHYGC++DLLG +G
Sbjct: 433 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 492
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A +I M M+PD IW SLL +C+ Y+N+E+ ++L+ +EP++ G+YVLLSNIYA
Sbjct: 493 EAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYA 552
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
GRW +V+++R L+ K MKK PGCS IE+++ V EF+ GD P ++I+
Sbjct: 553 TAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 231/402 (57%), Gaps = 15/402 (3%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKE 74
+ +L +C+ L L+ IH Q++K L +N+ ++K+I+ C L YA +F+ ++E
Sbjct: 6 LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCP 133
PN+ ++N M R + + A+ LY M+ SL +LP+ +T PF++KSCA
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMI------SLGLLPNCYTFPFLLKSCAKSKAF 119
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+QIH HV K G +L+ +Y + L +A KVF++ + RD+V++ LI+GY
Sbjct: 120 REGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGY 179
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G + A+ +FD++P +VSW AMISGY G+ EAL++F++M + PDE ++V
Sbjct: 180 ASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMV 239
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV+ ACAQ S+ELG +H + D + I NALI++YIKCG + A LF+ + +
Sbjct: 240 SVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK 299
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL--- 370
DV+SW+T+IGG + +A+ LF EM R PND+T + +L ACAH G G
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH 359
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
+Y + KR + + H L+D+ + G ++ A + + +
Sbjct: 360 VYIN--KRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI 399
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 174/367 (47%), Gaps = 44/367 (11%)
Query: 9 SIKELEDRFVPILQSCENL--IEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
+++ E V ++ +C IEL +++H+ I + + +V +ID+ G++ A
Sbjct: 230 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 289
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF+ + +V +N +I YT+ +LY A+ L+++MLR + P+ T+ ++
Sbjct: 290 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES-----PNDVTMLSILP 344
Query: 126 SCAGLLCPSLGKQIHAHVCKF--GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+CA L +G+ IH ++ K G+ + S +L+D+Y KC ++ A +VF+ + +R +
Sbjct: 345 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 404
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
+WN +I G+A G+ A D+F +M+
Sbjct: 405 SSWNAMIFGFAMHGRANA-------------------------------AFDIFSRMRKN 433
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH-LLRRTVICNALIEMYIKCGCINQ 302
IEPD+I+ V +L AC+ G L+LG I +++ + + +I++ G +
Sbjct: 434 EIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKE 493
Query: 303 ASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
A ++ + M +E D V W +++ + + +++ P N +++ L + A
Sbjct: 494 AEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIE-PKNPGSYVLLSNIYA 552
Query: 362 HTGFWNE 368
G WNE
Sbjct: 553 TAGRWNE 559
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 295/493 (59%), Gaps = 8/493 (1%)
Query: 18 VPILQSCENL--IELKKIHTQILKYLLSQSNFLVTK-MIDVCNSGGDLAYASLLFKQVKE 74
V + +C L +EL K ++ L +SN LV ++D+ GD+ +F + +
Sbjct: 227 VCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSD 286
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
N+ +YN ++ Y + L G + + +ML+ + PDK T+ I +CA L S
Sbjct: 287 KNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQR-----PDKVTMLSTIAACAQLGDLS 341
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
+GK HA+V + GL+ NA++D+Y KC + A KVF+ M+++ +V WN+LI+G
Sbjct: 342 VGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLV 401
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
R G+++ A +F +MP + +VSW MI + EA+D+ R+MQ GI+ D +++V
Sbjct: 402 RDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVG 461
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
+ AC LG+L+L +WI+ Y +KN + + AL++M+ +CG A ++F+ M +RD
Sbjct: 462 IASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRD 521
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V +W+ I A G A AI LF EM + V +D F+ LL+A +H G+ ++G F
Sbjct: 522 VSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFW 581
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+M++ H + +I HYGC+VDLLGRAG L++A ++++ MP+KP+ IWGS L++CR + N+
Sbjct: 582 AMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNV 641
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E A A E + L PE G +VLLSNIYA G+W DV+R+R ++ K +K G S IEV
Sbjct: 642 EFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEV 701
Query: 495 NNEVQEFVSGDDT 507
+ ++EF SGD++
Sbjct: 702 HGLIREFTSGDES 714
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 215/428 (50%), Gaps = 56/428 (13%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG---DLAYASLLFKQVKEPNV 77
LQ+C+ LIELK++H +LK + F + K+I C G L YA FK+ +
Sbjct: 29 LQTCKTLIELKQLHCNMLK----KGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKC 84
Query: 78 FLY--NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
LY N +IR Y + L AI +Y M+ I+PD FT PF++ +C+ ++ S
Sbjct: 85 SLYTCNTLIRGYAASGLCKEAIFIYLHMI----IVMGIVPDNFTFPFLLSACSKIMAFSE 140
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G Q+H V K GL N+L+ Y C ++ KVF+EM +R++V+W +LI+GY+
Sbjct: 141 GVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSV 200
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
+ K EA+ +F +M VG+EP+ +++V
Sbjct: 201 VNMAK-------------------------------EAVCLFFEMVEVGVEPNPVTMVCA 229
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ ACA+L LELG+ + + + T++ NAL++MY+KCG + ++FD+ ++++
Sbjct: 230 ISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNL 289
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-----L 370
V ++T++ HG A + + + EM + P+ +T + ++ACA G + G
Sbjct: 290 VMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAY 349
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
++ + ++R +I + I +D+ + G+ + A + + M K W SL++
Sbjct: 350 VFRNGLERLDNISNAI------IDMYMKCGKREAACKVFDSMSNKT-VVTWNSLIAGLVR 402
Query: 431 YSNLEIAV 438
LE+A+
Sbjct: 403 DGELELAL 410
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 314/578 (54%), Gaps = 71/578 (12%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
L C NL ++K++H QI++ L Q + K+I + A +F QV+EPNV L
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLC 85
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N++IRA+ N A ++ +M R + D FT PF++K+C+GL + K +H
Sbjct: 86 NSLIRAHALNSQPYQAFFVFSEMQR-----FGLFADNFTYPFLLKACSGLSWLPVVKMMH 140
Query: 141 AHVCKFGLKSHSITENALLDLYGKCD---------------------------------E 167
H+ K GL S NAL+D Y +C E
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYAR-------------------------------L 196
L +A K+F+EM RD+++WN ++ GYAR
Sbjct: 201 LRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 197 GQMKKARMLFDKMPYTT--IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
G M+ AR++FDKMP+ +V+WT +I+GY G EA + QM G+ D + +S
Sbjct: 261 GDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAIS 320
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
+L ACA+ G L LG H K++L + NAL++MY KCG + +A +F+ M ++D
Sbjct: 321 ILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKD 380
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+VSW+T++ GL HG +AI LF M++ + P+ +TFI +L +C H G +EG+ YF
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
SM++ + + K+EHYGCLVDLLGR GRL +A+ +++ MPM+P+ IWG+LL +CR ++ +
Sbjct: 441 SMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
+IA +++L+ L+P D GNY LLSNIYA WE V+ +R ++S ++K G S +E+
Sbjct: 501 DIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVI 532
+ + EF D + P I+ +L L QD +V+
Sbjct: 561 EDGIHEFTVFDKSHPKSDQIYQMLGSLIEPQDPDMEVL 598
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 200/570 (35%), Positives = 318/570 (55%), Gaps = 79/570 (13%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLV-TKMIDVCNSGGDLAYASLLFKQVKEP 75
+LQ+C ++ +++H + ++F++ T++I + + G + + ++F +++
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
N+F +NA++ AYT N L+ A++++ +++ PD FTLP VIK+CAGLL L
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHK----PDNFTLPCVIKACAGLLDLGL 226
Query: 136 GKQIHAHVCKF-------------------GLKSHSITE-------------NALLDLYG 163
G+ IH K GL ++ NALL Y
Sbjct: 227 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYA 286
Query: 164 KCDELIEAHKVFEEMTD----------------------------------RDIVAWN-- 187
+ + +A ++ +MTD R+ +A +
Sbjct: 287 QNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPF 346
Query: 188 ---NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+L+S Y G+ A++LFD M + ++VSW MI+GY+ G EA+++FRQM G
Sbjct: 347 IGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDG 406
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
I+P EI+I+ V AC+QL +L LG+ +H + K HL + +++I+MY K GCI +
Sbjct: 407 IQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQ 466
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++FD++ E+DV SW+ +I G HG+ +A+ LF +M RL + P+D TF G+L AC+H G
Sbjct: 467 RIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAG 526
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+GL YF+ M H+IE K+EHY C+VD+LGRAGR+D AL +IEEMP PD++IW SL
Sbjct: 527 LVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSL 586
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LSSCR + NL + LL LEPE NYVL+SN++A G+W+DV R+R ++ ++
Sbjct: 587 LSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQ 646
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
K GCS IEV +V F+ GD+ P L+++
Sbjct: 647 KDAGCSWIEVGGKVHNFLIGDEMLPELEEV 676
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 177/468 (37%), Positives = 277/468 (59%), Gaps = 38/468 (8%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G + A +F ++ +V +NA+I Y Y A+ L+K+M++
Sbjct: 173 TALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMK---- 228
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ V+ +CA LG+Q+H+ + G S+ NAL+DLY KC
Sbjct: 229 -TNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKC---- 283
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LF+ + Y ++SW +I GYTH+
Sbjct: 284 ---------------------------GEVETASGLFEGLSYKDVISWNTLIGGYTHMNL 316
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVIC 287
Y EAL +F++M G P+E++++S+LPACA LG++++G WIH+Y DK + + +
Sbjct: 317 YKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLR 376
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+LI+MY KCG I A Q+FD M+ R + SW+ +I G A HG+A+ A +F M++ +
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIE 436
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+DITF+GLLSAC+H+G + G F SM D+ I K+EHYGC++DLLG +G +A
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEE 496
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I M M PD IW SLL +C+ + N+E+ ++L+ +EP+++G+YVLLSNIYA GR
Sbjct: 497 MINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGR 556
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
W +V++ R L+ K MKK PGCS IE+++ V EF+ GD P ++I+
Sbjct: 557 WNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIY 604
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 233/402 (57%), Gaps = 15/402 (3%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGD-LAYASLLFKQVKE 74
+ +L +C+ L L+ IH +++K L +N+ ++K+I+ V + D L YA +F ++E
Sbjct: 6 LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCP 133
PN+ ++N M R + + A+ LY M+ SL ++P+ +T PF++K+CA
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMI------SLGLVPNSYTFPFLLKACAKSKAF 119
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+QIH HV K G +L+ +Y K +A KVF++ + RD+V++ LI GY
Sbjct: 120 REGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGY 179
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G + A+ +FD++P +VSW A+ISGY G+Y EAL++F++M ++PDE ++V
Sbjct: 180 ASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMV 239
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+VL ACAQ S+ELG +H + D + I NALI++YIKCG + AS LF+ + +
Sbjct: 240 TVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK 299
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL--- 370
DV+SW+T+IGG + +A+ LF EM R PN++T + +L ACAH G + G
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIH 359
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
+Y D KR + + L+D+ + G ++ A + + M
Sbjct: 360 VYID--KRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM 399
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 172/414 (41%), Positives = 256/414 (61%), Gaps = 4/414 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELI 169
I P+ T ++ +C S LG +H + CK GL +SH + A+L +Y K L
Sbjct: 52 IEPNHITFIALLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLR 111
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A VF+ + D++ V WN +I GY R GQ+ A +FDKMP ++SWTAMI+G+ G
Sbjct: 112 KARLVFDYIEDKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGF 171
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EAL FR+MQ+ G+ PD ++I+S + AC LG+L G W+H Y + N+
Sbjct: 172 HEEALAWFREMQISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNS 231
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI++Y +CGC+ A Q+FD+M +R VVSW++VI G A +G A++++ F +MQR P+
Sbjct: 232 LIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPD 291
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G L+AC+H G EG YF MK D+ I +IEHYGCLVDL RAGRL+ A ++
Sbjct: 292 GVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVV 351
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEI-AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
E MPMKP+ + GSLL++CR + N I A M+++ L+ + NYV+LSN+YA G+W
Sbjct: 352 ESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKYITDLDVKSHSNYVILSNMYAADGKW 411
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
E S+MR+ ++ +KK PG S IE+++ F++GD I +LEL++
Sbjct: 412 EGASKMRRKMKGLGLKKQPGYSSIEIDDCTHVFMAGDSAHVETAYIREVLELIS 465
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 36/247 (14%)
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL--GSLELGEW 270
TIVSWT+ I+ + G AEA+ F M++ GIEP+ I+ +++L AC GS LG
Sbjct: 20 TIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLGYL 79
Query: 271 IH---------------------MYCDKNHLL-----------RRTVICNALIEMYIKCG 298
+H MY HL + +V N +I+ Y++ G
Sbjct: 80 LHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNG 139
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
++ A +FD+M +RD++SW+ +I G G +A+ F EMQ V P+ + I ++
Sbjct: 140 QVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVA 199
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC + G + GL + + + L+DL R G ++ A + ++M K
Sbjct: 200 ACTNLGALSFGL-WVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKME-KRTV 257
Query: 419 KIWGSLL 425
W S++
Sbjct: 258 VSWNSVI 264
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 146/348 (41%), Gaps = 65/348 (18%)
Query: 17 FVPILQSCENLIELKK-----IHTQILKYLLSQSNFLV-TKMIDVCNSGGDLAYASLLFK 70
F+ +L +C N + +H K L +S+ +V T ++ + + G L A L+F
Sbjct: 59 FIALLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFD 118
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLIL--------------- 114
+++ N +N MI Y N A++++ +M RD + + ++
Sbjct: 119 YIEDKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAW 178
Query: 115 ----------PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK 164
PD + + +C L S G +H +V +++ N+L+DLY +
Sbjct: 179 FREMQISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCR 238
Query: 165 CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGY 224
C + A +VF++M R +V+WN++I G+A G ++ + F
Sbjct: 239 CGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNANESLVYF------------------ 280
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRR 283
R+MQ G PD ++ L AC+ +G +E G ++ M + R
Sbjct: 281 -------------RKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPR 327
Query: 284 TVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGK 330
L+++Y + G + A + + M ++ + V +++ NHG
Sbjct: 328 IEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNHGN 375
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 34/159 (21%)
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
N Q +Q +VSW++ I L+ G+ +A+ F +M+ + PN ITFI LLSAC
Sbjct: 7 NPKIQKLNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSAC 66
Query: 361 AHTGFWNEGLMYF-------DSMKRDH-------------------------HIEHKIE- 387
+ +EGL Y ++R H +IE K
Sbjct: 67 GNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSV 126
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ ++D R G++D A+++ ++MP + D W ++++
Sbjct: 127 TWNTMIDGYMRNGQVDNAVDVFDKMPDR-DLISWTAMIT 164
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 168/414 (40%), Positives = 256/414 (61%), Gaps = 4/414 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELI 169
+ P+ T ++ C S LG +H + CK GL ++H + A+L +Y K
Sbjct: 14 VEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFR 73
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A +F+ M D++ V WN +I GY R GQ+ A LFD+M ++SWTAM++G+ G
Sbjct: 74 KARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMVNGFVKKGF 133
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EAL FR+MQ+ G++PD ++I++ L AC LG+L G WIH Y + N+
Sbjct: 134 HEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDFKNNVRVSNS 193
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI++Y +CGC+ A Q+FD+M +R VVSW++VI G A +G AH+++ F +MQ P+
Sbjct: 194 LIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFYFRKMQEEGFKPD 253
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G L+AC+H G EGL YF +MKRD+ I +IEHYGC+VDL RAGRL+ AL ++
Sbjct: 254 AVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALKVV 313
Query: 410 EEMPMKPDAKIWGSLLSSCRTY-SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
+ MPMKP+ + GSLL++C+ + +N +A M+HL L + NYV+LSN+YA G+W
Sbjct: 314 QSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYVILSNMYAADGKW 373
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
E S+MR+ ++ +KK PG S IE++ F++GD +I +L L++
Sbjct: 374 EGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHVETANIREILGLMS 427
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 42/265 (15%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
I Y+ +++ MID G + A LF ++ ++ + AM+ + + A
Sbjct: 78 IFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMVNGFVKKGFHEEA 137
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
++ +++M S + PD + + +C L S G IH +V K++ N
Sbjct: 138 LSWFREM-----QISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDFKNNVRVSN 192
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI-- 214
+L+DLY +C + A +VF++M R +V+WN++I G+A G ++ F KM
Sbjct: 193 SLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFYFRKMQEEGFKP 252
Query: 215 --VSWTAMISGYTHIGSYAEALDVFRQM-------------------------------- 240
V++T ++ +H+G E L F+ M
Sbjct: 253 DAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALKV 312
Query: 241 -QMVGIEPDEISIVSVLPACAQLGS 264
Q + ++P+E+ I S+L AC G+
Sbjct: 313 VQSMPMKPNEVVIGSLLAACKNHGN 337
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/510 (37%), Positives = 293/510 (57%), Gaps = 43/510 (8%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNF-----LVTKMIDVCNSGGDLAYASLLFKQV 72
V ++ +C L + K +I+ + + F L T MID+ G + A +F ++
Sbjct: 135 VTVVFACAKLGAMHK--ARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRM 192
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+E NV ++AMI AY + A++L++ ML S +LPDK TL ++ +C+ L
Sbjct: 193 EEKNVISWSAMIAAYGYHGQGRKALDLFRMML-----SSGMLPDKITLASLLYACSDLKN 247
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+G+ IH V KFGL AL+D+YGKC E+
Sbjct: 248 LQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREI------------------------ 283
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+ AR LFDKMP +V+WT MI GY G+ E+L +F +M+ G+ PD++++
Sbjct: 284 -------EDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAM 336
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V+V+ ACA+LG++ I Y + ++ A+I+M+ KCGC+ A ++FD+M E
Sbjct: 337 VTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE 396
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
++V+SWS +I HG+ KA+ LF M R + PN IT + LL AC+H G EGL +
Sbjct: 397 KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRF 456
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F M D+ + ++HY C+VDLLGRAGRLD+AL +IE M ++ D +WG+ L +CRT+
Sbjct: 457 FSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHK 516
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
++ +A A LL L+P++ G+Y+LLSNIYA GRWEDV++ R L+ + +KK PG + I
Sbjct: 517 DVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWI 576
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
EV+N+ +F GD T P K+I+ +L+ L
Sbjct: 577 EVDNKSHQFSVGDTTHPRSKEIYEMLKSLG 606
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 172/340 (50%), Gaps = 47/340 (13%)
Query: 94 GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI 153
G IN + R G+ PD +TLPFVI++C L +G+ IH V KFGL
Sbjct: 9 GDYINCFGTFRELIRCGAR--PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHF 66
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
AL+D+Y KC E+ +A +F++M +RD+V W +I GYA G+ ++ +LF+K
Sbjct: 67 VCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK----- 121
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
M+ G+ PD++++V+V+ ACA+LG++ I
Sbjct: 122 --------------------------MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDD 155
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
Y + ++ A+I+MY KCGC+ A ++FD+M E++V+SWS +I HG+ K
Sbjct: 156 YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 215
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK----IEHY 389
A+ LF M + P+ IT LL AC+ G + HHI +K ++H+
Sbjct: 216 ALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLI-------HHIVYKFGLDLDHF 268
Query: 390 GC--LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
C LVD+ G+ ++ A + ++MP + D W ++
Sbjct: 269 VCAALVDMYGKCREIEDARFLFDKMPER-DLVTWTVMIGG 307
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 206/411 (50%), Gaps = 41/411 (9%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
++++C +L L + IH + K+ L +F+ ++D+ ++ A LF +++E +
Sbjct: 36 VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERD 95
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ + MI Y ++ L+++M + ++PDK + V+ +CA L
Sbjct: 96 LVTWTVMIGGYAECGKANESLVLFEKMREEG-----VVPDKVAMVTVVFACAKLGAMHKA 150
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ I ++ + + I A++D+Y KC
Sbjct: 151 RIIDDYIQRKKFQLDVILGTAMIDMYAKC------------------------------- 179
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G ++ AR +FD+M ++SW+AMI+ Y + G +ALD+FR M G+ PD+I++ S+L
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+ L +L++G IH K L +C AL++MY KC I A LFD+M ERD+V
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+ +IGG A G A++++ LF +M+ V P+ + + ++ ACA G ++ D +
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 359
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+R + + ++D+ + G ++ A I + M K + W +++++
Sbjct: 360 QR-KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK-NVISWSAMIAA 408
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 36/286 (12%)
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
M+ G+ +G Y FR++ G PD ++ V+ AC L +L++G IH K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
L +C AL++MY+KC I A LFD+M ERD+V+W+ +IGG A GKA++++ LF
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR--------------------- 378
+M+ V P+ + + ++ ACA G ++ + D ++R
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 379 ---------DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLS 426
D E + + ++ G G+ +AL++ M M PD SLL
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL--LSNIYAKHGRWED 470
+C NL++ + + H++ D ++V L ++Y K ED
Sbjct: 241 ACSDLKNLQMGRL-IHHIVYKFGLDLDHFVCAALVDMYGKCREIED 285
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/488 (38%), Positives = 282/488 (57%), Gaps = 39/488 (7%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN---SGGDLAYASLLFKQVKEPNV 77
L C +L ELK+I +K L ++TK+I+ C + + YA LF+ + +P++
Sbjct: 33 LPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDI 92
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
L+N+M R Y+ ++ AI+L+ + L +LPD +T P ++K+C GK
Sbjct: 93 VLFNSMFRGYSRSNAPLKAISLFIKALN-----YNLLPDDYTFPSLLKACVVAKAFQQGK 147
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
Q+H K GL + L+++Y C+++ A +V
Sbjct: 148 QLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRV----------------------- 184
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
FD++ +VS+ A+I+GY EAL +FRQ+Q ++P++++++SVL
Sbjct: 185 --------FDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLS 236
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
+CA LG+L+LG+WIH Y KN L + + ALI+MY KCG ++ A +F+ M RD +
Sbjct: 237 SCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQA 296
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
WS +I A HG+ + +F EM R KV P++ITF+GLL AC+HTG +EG YF SM
Sbjct: 297 WSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMS 356
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ I I+HYGC+VDLLGRAG L +A I+E+P+KP +W +LLSSC ++ NLE+A
Sbjct: 357 EVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELA 416
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
M +L L+ G+YV+LSN+ A+ G+WEDV +RKL+ K K PGCS IEV+N
Sbjct: 417 KQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNV 476
Query: 498 VQEFVSGD 505
V EF SGD
Sbjct: 477 VHEFFSGD 484
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 142/277 (51%), Gaps = 9/277 (3%)
Query: 156 NALLDLYGKCDELIEAHKV----FEEMTDRDIVAWNNLISGYAR---LGQMKKARMLFDK 208
++LL KC L E ++ + D+ LI+ + M A LF+
Sbjct: 27 SSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEA 86
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+P IV + +M GY+ + +A+ +F + + PD+ + S+L AC + + G
Sbjct: 87 IPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQG 146
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+ +H K L +C LI MY C ++ A ++FD+++E VVS++ +I G A
Sbjct: 147 KQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARS 206
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
+ ++A+ LF ++Q K+ PND+T + +LS+CA G + G + +K++ ++ ++
Sbjct: 207 SRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKN-GLDKYVKV 265
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
L+D+ + G LD A+++ E M ++ D + W +++
Sbjct: 266 NTALIDMYAKCGSLDGAISVFESMSVR-DTQAWSAMI 301
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 173/371 (46%), Gaps = 44/371 (11%)
Query: 5 IGALSIKELED--RFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG 59
I AL+ L D F +L++C + + K++H +K L+++ ++ +I++
Sbjct: 116 IKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGC 175
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
D+ A +F ++ EP V YNA+I Y + A++L++Q+ + P+ T
Sbjct: 176 NDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQL-----QARKLKPNDVT 230
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ V+ SCA L LGK IH +V K GL + AL+D+Y KC L A VFE M+
Sbjct: 231 VLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMS 290
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
RD AW+ +I YA GQ + + + +F +
Sbjct: 291 VRDTQAWSAMIVAYAMHGQGQ-------------------------------DVMSMFEE 319
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
M ++PDEI+ + +L AC+ G ++ G + + + ++ ++++ + G
Sbjct: 320 MARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAG 379
Query: 299 CINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
+++A + D++ ++ + W T++ ++HG A + +++ L + ++ L
Sbjct: 380 LLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELD-DSHGGDYVILS 438
Query: 358 SACAHTGFWNE 368
+ CA G W +
Sbjct: 439 NLCARAGKWED 449
>gi|326492712|dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506700|dbj|BAJ91391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 275/484 (56%), Gaps = 9/484 (1%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC-NSGGDLAYASLLFKQVKEPNVFLYNA 82
C + L+++H ++K LS+ ++ + C G D AYA+ + + PN F++N
Sbjct: 42 CATMAHLRQLHAALVKSGLSKDPIAASRAVAFCAGEGRDAAYAARIVRYHPRPNSFMWNT 101
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
IRA ++ A+ L+ MLR P P++ T P + + A L G +H
Sbjct: 102 AIRALSDGPGPDAAVALFVDMLRSPTP-----PERRTFPSLFAAYARLGRADDGAALHGM 156
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V K GL + T N + +Y EA +F + D+VA N+ I +R G++ +A
Sbjct: 157 VLKLGLAGDAYTRNTTIAMYASSGRADEALALFGQCQVFDVVACNSAIVALSRAGRVDEA 216
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R +FD MP T+ +W+AM+S Y+ + +A+D+F MQ+ G+EP+ +VSVL CA L
Sbjct: 217 RAVFDGMPSRTVATWSAMVSAYSRAARFHDAVDLFSAMQVDGVEPNANVLVSVLGCCASL 276
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV---SWS 319
G+LE G W+H Y DK + ++ AL++MY KCG I++A Q+FD + + SW+
Sbjct: 277 GALEQGAWVHAYIDKQDVGMNALVVIALVDMYCKCGSIHKARQVFDTSRSQGLAKLSSWN 336
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++ GLA HG+ +A+ LF E++ + P+++TFI +L A H+G +E F SM R+
Sbjct: 337 AMMLGLAAHGQCQEALALFSELESYGLRPDNVTFIAMLMAYGHSGMADEAKALFASMARE 396
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
+ + IEHYGCLVD L RAGRL +A + I MPMKPDA IWG+LLS CR + + E
Sbjct: 397 YGVTPGIEHYGCLVDALARAGRLREAEDTIRAMPMKPDAAIWGALLSGCRLHGDAEAGAR 456
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A + +P D+G YVL +++ A+ G +R +R + + K PGCS+IEV+ V
Sbjct: 457 AARGAVECDPRDSGAYVLAASVLARDGEVGRGLGVRGKMREEGVAKVPGCSMIEVDGVVH 516
Query: 500 EFVS 503
EFVS
Sbjct: 517 EFVS 520
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/471 (38%), Positives = 288/471 (61%), Gaps = 9/471 (1%)
Query: 28 IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
+E +K H +K + + ++++ G + A +F ++ + L+N M+R Y
Sbjct: 66 VEGRKAHAAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCY 125
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK-F 146
Y A+ L +QM R S + PD+ TL + +C+ SLG++IH ++ F
Sbjct: 126 IRCGWYSAAVALSEQMER-----SGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVF 180
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
G + NALLD+Y K D L EA K+FE+M R+I++W L+SGY GQ+ KAR+LF
Sbjct: 181 GF--NLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLF 238
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
++ ++ WTAMI+ G + EAL +FR MQM +EPD ++V++L CA LG+L+
Sbjct: 239 NQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALD 298
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
GEWIH Y ++ + V+ ALI+MY KCG I ++ ++F +M RD +W+ +I GLA
Sbjct: 299 QGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLA 358
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+G+A +A+ LF +MQR KV P+ +TFIG+LSAC H G +EG F +M+ + IE ++
Sbjct: 359 TNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRV 418
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA-KIWGSLLSSCRTYSNLEIAVIAMEHLL 445
EHY CLV+LLGRAG LD+A +I ++P+ DA ++G+LL++C+ + N+E++ + +
Sbjct: 419 EHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRIC 478
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ + T +L+SN+YA RWEDV R+R + ++KK GCSLIEV
Sbjct: 479 EQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKNAGCSLIEVKG 529
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 173/382 (45%), Gaps = 72/382 (18%)
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N +IR + + +Y D R L+ D FT PFV+++ L G++ H
Sbjct: 18 NVLIRTLARRGSFARVMAVYY----DLRARGLV-ADSFTYPFVLRAVGVLKLSVEGRKAH 72
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
A K G + + T ++L+++Y + A KVF+EM R +V WN ++ Y R G
Sbjct: 73 AAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCG--- 129
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
W Y+ A+ + QM+ G+ PD +++V+ + AC+
Sbjct: 130 ----------------W------------YSAAVALSEQMERSGVTPDRVTLVTAVTACS 161
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
+ L LG IH+Y D N + NAL++MY K C+ +A +LF+QM R+++SW+
Sbjct: 162 RARDLSLGRRIHVYMD-NVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTI 220
Query: 321 VIGGLA-------------------------------NHGKAHKAIHLFHEMQRLKVPPN 349
++ G HG +A+ LF +MQ +V P+
Sbjct: 221 LVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPD 280
Query: 350 DITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
T + LL+ CA+ G ++G ++ + +R I+ + L+D+ + G ++++L +
Sbjct: 281 RFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGT--ALIDMYSKCGHIEKSLEV 338
Query: 409 IEEMPMKPDAKIWGSLLSSCRT 430
M + DA W +++ T
Sbjct: 339 FWRMQGR-DATAWTAIICGLAT 359
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/515 (35%), Positives = 298/515 (57%), Gaps = 42/515 (8%)
Query: 11 KELEDRFV--PILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
+ + DRF +L+ C L+E K +H Q++KY+L ++ T ++++ + GDL A
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF+++ N ++ +MI Y NH A+ LYK+M D + PD+ T+ ++
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFS-----PDEVTMATLVS 188
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA L +G ++H+H+ + +K ++ +AL+++Y KC
Sbjct: 189 ACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKC-------------------- 228
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VG 244
G +K AR +FD++ + +W+A+I GY EAL +FR++
Sbjct: 229 -----------GDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSN 277
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ P+E++I++V+ ACAQLG LE G W+H Y + + N+LI+M+ KCG I+ A
Sbjct: 278 MRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAK 337
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++FD M +D++SW++++ GLA HG +A+ FH MQ + P++ITFIG+L+AC+H G
Sbjct: 338 RIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAG 397
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
EG F ++ + + K EHYGC+VDLL RAG L +A I MP++PD IWGS+
Sbjct: 398 LVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSM 457
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L +CR Y+NLE+ A LL LEP + G Y+LLSNIYA+ W +V ++R+L+ K ++
Sbjct: 458 LGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQ 517
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
KTPGCS + ++N F++GD + P + +I +L
Sbjct: 518 KTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLR 552
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/520 (37%), Positives = 306/520 (58%), Gaps = 44/520 (8%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVK 73
R + Q+C+N L +IH ++ L + +V ++I + G L YA LF+++
Sbjct: 14 RRSKLWQNCKNFRTLMQIHAFMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFEEIP 73
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+P+V + N ++R + + LY +M + + PD++T FV+K+C+ L
Sbjct: 74 KPDVSICNHVLRGSAQSLKPEKTVALYTEMEKRG-----VSPDRYTFTFVLKACSKLEWR 128
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKC----------DELIEAHKV--------- 174
S G IH V + G + +NAL+ + C D+ +AHKV
Sbjct: 129 SNGFAIHGKVVRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGY 188
Query: 175 ------------FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
F+EM D+D VAWN +I+G + +M AR LFD+ +V+W AMIS
Sbjct: 189 AKRGKIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMIS 248
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
GY + G EAL +F++M+ G PD ++I+S+L ACA LG LE G+ +H+Y + +
Sbjct: 249 GYVNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVS 308
Query: 283 RTV-----ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
++ I NALI+MY KCG I++A ++F M +RD+ +W+T+I GLA H A ++ +
Sbjct: 309 SSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALH-HAEGSVEM 367
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F EMQRLKV PN++TFIG++ AC+H+G +EG YF M+ ++IE I+HYGC+VD+LG
Sbjct: 368 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 427
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
RAG L++A +E M ++P+A +W +LL +C+ Y N+E+ A E LL + +++G+YVL
Sbjct: 428 RAGLLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVL 487
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
LSNIYA G+W+ V ++RK+ +KK G SLIE +++
Sbjct: 488 LSNIYASTGQWDGVQKVRKMFDDTRVKKPTGISLIEEDDD 527
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/499 (37%), Positives = 283/499 (56%), Gaps = 39/499 (7%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +++SC L E K++H I+K+ F+ + ++ + + G+ L+F ++
Sbjct: 131 FPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMV 190
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
N+ + A+I Y N + + ++++M+ GS P+ TL V+ +CAGL
Sbjct: 191 VRNIVSWTAVIAGYVQNRYFKEGLGVFREMV-----GSGTQPNAVTLVSVLPACAGLEFL 245
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+LGK IH + K G+ D D+ N LI+ Y
Sbjct: 246 NLGKLIHGYGIKLGV-------------------------------DPDVSLTNALIALY 274
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G ++ AR LFD M +VSW AMI+ Y + A A+ +FR+MQ ++ D I++V
Sbjct: 275 GKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMV 334
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV+ ACA LG+L G W+H + L I NALI+MY KCG I+ A ++F+++ R
Sbjct: 335 SVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCR 394
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
VVSW+++IG A+HG A+ LF M+ V PN TF + +AC H+G EG +F
Sbjct: 395 SVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHF 454
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM RD+ I +EH C+VDLLGRAG L +A I++MP++PD +WG+LL SCR +SN
Sbjct: 455 ESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSN 514
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
LE+A + E L +L+P+ YVL+SNIYA+ GRWED +R+RKL+ + +KK PG SL+E
Sbjct: 515 LELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVE 574
Query: 494 VNNEVQEFVSGDDTKPFLK 512
VN F+SG ++ L+
Sbjct: 575 VNRRFHTFLSGSRSQSSLR 593
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 211/423 (49%), Gaps = 39/423 (9%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI-DVCNSGGDLAYASLLFKQVKEP 75
F +L C +L +L +IH ++ Q+ L TK+I C + YA +F Q+ +
Sbjct: 32 FNYLLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKR 91
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+VFL+N +IR Y + A+ LY M G+ + PD +T PFV++SCA L
Sbjct: 92 DVFLWNTLIRGYADAGPCEEALALYSNM-----HGAGLFPDNYTFPFVVRSCAVLSALRE 146
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
GK++H ++ K G S +++L+ +Y + E + VF EM R+IV+W +I+GY +
Sbjct: 147 GKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQ 206
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
K E L VFR+M G +P+ +++VSV
Sbjct: 207 NRYFK-------------------------------EGLGVFREMVGSGTQPNAVTLVSV 235
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
LPACA L L LG+ IH Y K + + NALI +Y KCG + A LFD MV +++
Sbjct: 236 LPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNL 295
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSW+ +I + A+ LF MQ KV + IT + ++SACA G N G +
Sbjct: 296 VSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHEL 355
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
+KR +E + L+D+ + G +D A + E +P + W S++ +C ++ + E
Sbjct: 356 VKRK-GLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVS-WTSMIGACASHGHGE 413
Query: 436 IAV 438
A+
Sbjct: 414 DAL 416
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 17/294 (5%)
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
M AR +FD+MP + W +I GY G EAL ++ M G+ PD + V+ +
Sbjct: 78 MDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRS 137
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA L +L G+ +H K+ + ++L+ MY + G +F +MV R++VSW
Sbjct: 138 CAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSW 197
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-LMYFDSMK 377
+ VI G + + + +F EM PN +T + +L ACA F N G L++ +K
Sbjct: 198 TAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIK 257
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
++ + L+ L G+ G ++ A ++ + M ++ + W +++++ +N
Sbjct: 258 LG--VDPDVSLTNALIALYGKCGNVETARSLFDGMVVQ-NLVSWNAMIAAYEQ-NNAGAN 313
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYA-------KHGRWEDVSRMRKLIRSKSMK 484
+ + + E D ++S I A GRW M +L++ K ++
Sbjct: 314 AVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRW-----MHELVKRKGLE 362
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/495 (37%), Positives = 273/495 (55%), Gaps = 27/495 (5%)
Query: 21 LQSCENLIELKKIHTQ-ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
L++C + E+K++H Q ++ LL ++++ + + YA +F+++ P+VF+
Sbjct: 20 LRTCHDFQEVKQLHAQFVVSGLLGYHPLCARRLLEAYVTMSQIYYAFSIFERIPSPDVFV 79
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
YN MIR T D FT FV+K+C+ L P GKQ+
Sbjct: 80 YNTMIRGLTM--------------------------DNFTYTFVLKACSHLKAPFEGKQV 113
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H + K G+ + ++L+ +Y + +A +V E ++ + +A N +ISGY G++
Sbjct: 114 HCQIIKAGIVPDTHIHSSLIHMYTNSGSIDDAERVLGEFSEENTLAKNAMISGYLTEGRV 173
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
KAR +FD M SW+A+I+GYT G + EAL +F+ M + I P+E ++VS+L AC
Sbjct: 174 DKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAALVSLLSAC 233
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
QLG+L G WIH Y DK +L T + ALI+MY K G I LF +M RDVV+W
Sbjct: 234 GQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQKMARRDVVTWG 293
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I A HG A K LF EM + PN + F+ +LSAC+H G EG YF M+
Sbjct: 294 VMISAFAIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVEEGRQYFSQMEHG 353
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
I+ IEHYGC+VDLLGRAG L A +I MP +P++ IWGSLL +CRT+++L+
Sbjct: 354 FGIKPSIEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACRTHNDLKRGTW 413
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A E+L+ LEP + L ++A G E+ +++RK+I K M T G S IEV V
Sbjct: 414 AFENLMELEPTSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTTCGSSFIEVEGAVH 473
Query: 500 EFVSGDDTKPFLKDI 514
EF G +DI
Sbjct: 474 EFTVGYTVHNKARDI 488
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 293/521 (56%), Gaps = 38/521 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +L C++L K+IH +LK L F+ K++ C + L YA LF+ P
Sbjct: 9 LSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNP 68
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+VF++N +IR + ++ + +M R+ S PD F+ F++K+ A L +
Sbjct: 69 DVFMHNTLIRGLYESDRPQDSLLKFIEMRRN----SFSPPDSFSFAFIVKAAANLRSVRV 124
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G Q+H GL +H L+ +YG+C + A KVF+EM + + +AWN +++ R
Sbjct: 125 GIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCR 184
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYT------------------------------ 225
G MK R LFD MP ++SW M++GYT
Sbjct: 185 GGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGF 244
Query: 226 -HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT 284
H G + EA FR++Q G+ P+E S+ VL ACAQ G+LE G+ +H + +K+ L
Sbjct: 245 AHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIV 304
Query: 285 VICNALIEMYIKCGCINQASQLFDQ-MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+ NAL++ Y KCG + A +F++ M ER++VSW++++ LA HG +AI +FH+M+
Sbjct: 305 SVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEE 364
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+ P++I FI LL AC+H G +G YFD MK ++IE IEHYGC+VDL GRAG+L
Sbjct: 365 SGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQ 424
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A + +MP+ A IW +LL +C + ++++A E L L+P ++ ++VLLSN YA
Sbjct: 425 KAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYA 484
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
G+W+D + +R+ + + + KTPG S+IEV+ + F++G
Sbjct: 485 VAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAG 525
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 294/553 (53%), Gaps = 71/553 (12%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK-EPNVFLYNAMIRAYTNNHLYGL 95
+L++ + + + TK + + S + YA LF Q + FL N+MI+AY Y
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPHREDSFLCNSMIKAYLETRHYND 60
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
+ Y RD R + + PD FT + KSC +C G Q+H+ + + G +
Sbjct: 61 SFAFY----RDLRKETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVS 116
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ----------------- 198
++D+Y K ++ A VF+EM R V+W LI GY R G+
Sbjct: 117 TGVVDMYAKFGKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDV 176
Query: 199 ---------------MKKARMLFDKMPYTTIVSWTAMISGY------------------- 224
M AR LFD+M + T+++WT MI GY
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPER 236
Query: 225 ------THIGSYA------EALDVFRQMQ-MVGIEPDEISIVSVLPACAQLGSLELGEWI 271
T IG Y EA+ +F++MQ ++PD+++I+SVLPA + G+L LGEW
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H + + +L ++ +C A+++MY KCG I +A ++FD+M E+ V SW+ +I G A +G A
Sbjct: 297 HCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
H A+ LF M + + P++IT + ++SAC H G EG +F M R + KIEHYGC
Sbjct: 357 HAALDLFLTMAK-EEKPDEITMLAVISACNHGGLVEEGRKWF-QMMRKFGLNAKIEHYGC 414
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VDLLGRAG L QA ++I MP KP+ I S LS+C Y ++E A ++ + LEP++
Sbjct: 415 MVDLLGRAGNLKQAEHLITNMPFKPNGIILSSFLSACGQYKDIERAERILKKAVELEPQN 474
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFL 511
GNYVLL N+YA RW+D ++ ++R KK GCSLIE+N V EF+SGD T P
Sbjct: 475 DGNYVLLRNLYAADKRWDDFGMVKNMMRKNEAKKEVGCSLIEINYIVSEFISGDTTHPHR 534
Query: 512 KDIFWLLELLALH 524
+ I +LE L +H
Sbjct: 535 QSIHLVLEKLLVH 547
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 290/497 (58%), Gaps = 9/497 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ L +C L L K++H Q+++ L ++ + M+++ G A +F ++
Sbjct: 294 YTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLR 353
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ N + +I + + ++ L+ QM L+ D+F L +I C +
Sbjct: 354 DRNSVSWTVLIGGFLQYGCFSESVELFNQM-----RAELMAVDQFALATLISGCCNTMDI 408
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG Q+H+ K G + N+L+ +Y KC L A +F M +RDIV+W +I+ Y
Sbjct: 409 CLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAY 468
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISI 252
+++G + KAR FD M +++W AM+ Y G+ + L ++ M + PD ++
Sbjct: 469 SQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTY 528
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V++ CA +G+ +LG+ I + K L+ T + NA+I MY KCG I++A + FD +
Sbjct: 529 VTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSR 588
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+D+VSW+ +I G + HG +AI +F ++ P+ I+++ +LS C+H+G EG Y
Sbjct: 589 KDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFY 648
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
FD MKRDH+I +EH+ C+VDLLGRAG L +A N+I+EMPMKP A++WG+LLS+C+T+
Sbjct: 649 FDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHG 708
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N ++A +A +HL L+ +G Y+LL+ +YA G+ +D +++RKL+R K +KK+PG S +
Sbjct: 709 NNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWM 768
Query: 493 EVNNEVQEFVSGDDTKP 509
EVNN V F + D + P
Sbjct: 769 EVNNRVHVFKAEDVSHP 785
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 218/485 (44%), Gaps = 36/485 (7%)
Query: 21 LQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA-SLLFKQVKEPN 76
L+SC L + +H++++ L+ FL ++ S G L+ A +LL ++ EPN
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLI---------------------- 113
V +N M+ Y A+ L+ +M RD + + I
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151
Query: 114 ----LPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
LP+ FT V+KSC L + Q+ + KF + + AL+D+ +C +
Sbjct: 152 TGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMD 211
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
A K F + + I+ N+++ GYA+ + A +F MP +VSW +IS + G
Sbjct: 212 FASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGR 271
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
EALD+ M G+ PD + S L ACA+L SLE G+ +H+ +N + +A
Sbjct: 272 VREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASA 331
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
++E+Y KCGC +A ++F + +R+ VSW+ +IGG +G +++ LF++M+ + +
Sbjct: 332 MVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVD 391
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
L+S C +T G + H + L+ + + G L A I
Sbjct: 392 QFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVS-NSLISMYAKCGNLQNAELIF 450
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
M + D W ++++ YS + A E + + + + Y +HG E
Sbjct: 451 NFMAER-DIVSWTGMITA---YSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEE 506
Query: 470 DVSRM 474
D +M
Sbjct: 507 DGLKM 511
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 148/329 (44%), Gaps = 38/329 (11%)
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF-EE 177
L ++SC + + +H+ + GL S +N LL Y C L +A + +E
Sbjct: 27 ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE 86
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
+T+ +++ N +++GYA+LG + A LF +MP + SW ++SGY G + ALD+F
Sbjct: 87 ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIF 146
Query: 238 RQMQMVGIE-PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
M+ G P+ + V+ +C LG E+ + K + AL++M ++
Sbjct: 147 VSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVR 206
Query: 297 CGCINQAS-------------------------------QLFDQMVERDVVSWSTVIGGL 325
CG ++ AS ++F M ERDVVSW+ VI L
Sbjct: 207 CGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISAL 266
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF--WNEGLMYFDSMKRDHHIE 383
+ G+ +A+ + +M V P+ T+ L+ACA W + L + ++ HI+
Sbjct: 267 SKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQL-HVQVIRNLPHID 325
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
+ +V+L + G +A + +
Sbjct: 326 PYVA--SAMVELYAKCGCFKEAKRVFSSL 352
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/515 (35%), Positives = 296/515 (57%), Gaps = 42/515 (8%)
Query: 11 KELEDRFV--PILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
+ + DRF +L+ C L+E K +H Q++KY+L ++ T ++++ + GDL A
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF+++ N ++ +MI Y NH A+ LYK+M D + PD+ T+ ++
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFS-----PDEVTMATLVS 188
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA L +G ++H+H+ + +K ++ +AL+++Y KC
Sbjct: 189 ACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKC-------------------- 228
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VG 244
G +K AR +FDK+ + +W+A+I GY EAL +FR++
Sbjct: 229 -----------GDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSN 277
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ P+E++I++V+ ACAQLG LE G W+H Y + + N+LI+M+ KCG I+ A
Sbjct: 278 MRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAK 337
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++FD M +D++SW++++ G A HG +A+ F MQ + P++ITFIG+L+AC+H G
Sbjct: 338 RIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAG 397
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
EG F ++ + + K EHYGC+VDLL RAG L +A I MP++PD IWGS+
Sbjct: 398 LVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSM 457
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L +CR Y+NLE+ A LL LEP + G Y+LLSNIYAK W +V ++R+L+ K ++
Sbjct: 458 LGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQ 517
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
KTPGCS + ++N F++GD + P + +I +L
Sbjct: 518 KTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLR 552
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/520 (36%), Positives = 307/520 (59%), Gaps = 44/520 (8%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVK 73
R + Q+C+N+ LK+IH ++ L + +V ++I + G L YA LF ++
Sbjct: 14 RRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIP 73
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+P+V + N ++R + ++LY +M + + PD++T FV+K+C+ L
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRG-----VSPDRYTFTFVLKACSKLEWR 128
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKC----------DELIEAHKV--------- 174
S G H V + G + +NAL+ + C D+ +AHKV
Sbjct: 129 SNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGY 188
Query: 175 ------------FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
F+EM +D VAWN +I+G + +M AR LFD+ +V+W AMIS
Sbjct: 189 AKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMIS 248
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
GY + G EAL +F++M+ G PD ++I+S+L ACA LG LE G+ +H+Y + +
Sbjct: 249 GYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVS 308
Query: 283 RTV-----ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
++ I NALI+MY KCG I++A ++F + +RD+ +W+T+I GLA H A +I +
Sbjct: 309 SSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEM 367
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F EMQRLKV PN++TFIG++ AC+H+G +EG YF M+ ++IE I+HYGC+VD+LG
Sbjct: 368 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 427
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
RAG+L++A +E M ++P+A +W +LL +C+ Y N+E+ A E LL + +++G+YVL
Sbjct: 428 RAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVL 487
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
LSNIYA G+W+ V ++RK+ +KK G SLIE +++
Sbjct: 488 LSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDD 527
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/478 (36%), Positives = 292/478 (61%), Gaps = 8/478 (1%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
E +K+H ++K L ++ +D+ G + + +F+++ + + +N MI Y
Sbjct: 126 EGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYV 185
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
+ A+++Y++M T S P++ T+ + +CA L LGK+IH ++ L
Sbjct: 186 RCKRFEEAVDVYRRMW----TESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIAS-EL 240
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+I NALLD+Y KC + A ++F+ MT +++ W ++++GY GQ+ +AR LF++
Sbjct: 241 DLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFER 300
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
P IV WTAMI+GY + E + +F +MQ+ G++PD+ +V++L CAQ G+LE G
Sbjct: 301 SPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQG 360
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+WIH Y D+N + V+ ALIEMY KCGCI ++ ++F+ + E+D SW+++I GLA +
Sbjct: 361 KWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMN 420
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
GK +A+ LF MQ + P+DITF+ +LSAC+H G EG F SM +HIE +EH
Sbjct: 421 GKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEH 480
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPD---AKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
YGC +DLLGRAG L +A +++++P + + ++G+LLS+CRTY N+++ L
Sbjct: 481 YGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALA 540
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVS 503
++ D+ + LL++IYA RWEDV ++R ++ +KK PG S IEV+ + Q+ +S
Sbjct: 541 KVKSSDSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIEVDGKWQQRLS 598
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 217/449 (48%), Gaps = 73/449 (16%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLL 68
K ++ ++ +L+SC+++ +LK+I I L Q + K++ +S GD YA+ +
Sbjct: 5 KLMKGTYISLLKSCKSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRI 64
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F + +P++F+YN MI+A+ + + AI+L++Q+ + PD +T P+V+K
Sbjct: 65 FNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHG-----VWPDNYTYPYVLKGIG 119
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
+ G+++HA V K GL+ N+ +D+Y + + +VFEEM DRD V+WN
Sbjct: 120 CIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNI 179
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-P 247
+ISGY R + + EA+DV+R+M E P
Sbjct: 180 MISGYVRCKR-------------------------------FEEAVDVYRRMWTESNEKP 208
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+E ++VS L ACA L +LELG+ IH Y + L T++ NAL++MY KCG ++ A ++F
Sbjct: 209 NEATVVSTLSACAVLRNLELGKEIHDYI-ASELDLTTIMGNALLDMYCKCGHVSVAREIF 267
Query: 308 DQMV-------------------------------ERDVVSWSTVIGGLANHGKAHKAIH 336
D M RD+V W+ +I G + + I
Sbjct: 268 DAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIA 327
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF EMQ V P+ + LL+ CA +G +G + + ++ I+ L+++
Sbjct: 328 LFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQG-KWIHNYIDENRIKVDAVVGTALIEMY 386
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ G ++++ I + K D W S++
Sbjct: 387 AKCGCIEKSFEIFNGLKEK-DTTSWTSII 414
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 180/436 (41%), Gaps = 75/436 (17%)
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
K T ++KSC + S KQI AH+ GL+ T N L+
Sbjct: 8 KGTYISLLKSCKSM---SQLKQIQAHIFCVGLQQDRDTLNKLMAF--------------- 49
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
S + LG A +F+ + ++ + MI + GS+ A+ +
Sbjct: 50 --------------SMDSSLGDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISL 95
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
F+Q++ G+ PD + VL +G + GE +H + K L +CN+ ++MY +
Sbjct: 96 FQQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAE 155
Query: 297 CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIG 355
G + +Q+F++M +RD VSW+ +I G + +A+ ++ M PN+ T +
Sbjct: 156 LGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVS 215
Query: 356 LLSACA-----------HTGFWNE-------GLMYFD--------SMKRDHHIEHKIEHY 389
LSACA H +E G D S+ R+ +++
Sbjct: 216 TLSACAVLRNLELGKEIHDYIASELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNV 275
Query: 390 GCLVDLLGR---AGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE--IAVIAMEHL 444
C ++ G+LDQA N+ E P + D +W ++++ ++ E IA+ +
Sbjct: 276 NCWTSMVTGYVICGQLDQARNLFERSPSR-DIVLWTAMINGYVQFNRFEETIALFGEMQI 334
Query: 445 LVLEPEDTGNYVLLSNIYA----KHGRW------EDVSRMRKLIRSKSMKKTPGCSLIEV 494
++P+ LL+ + G+W E+ ++ ++ + ++ C IE
Sbjct: 335 RGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEK 394
Query: 495 NNEVQEFVSGDDTKPF 510
+ E+ + DT +
Sbjct: 395 SFEIFNGLKEKDTTSW 410
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/484 (38%), Positives = 291/484 (60%), Gaps = 18/484 (3%)
Query: 62 LAYASLLF--KQVKEPNVFLYNAMIRAYTNN---HLYGLAINLYKQMLRDPRTGSLILPD 116
+AYA+ +F + +K + FL+N +IRA +N I++Y +M R+ R + PD
Sbjct: 8 IAYANPIFHIRHLKLES-FLWNIIIRAIVHNVSSPQRHSPISVYLRM-RNHR----VSPD 61
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
T PF++ S L LG++ HA + FGL +LL++Y C +L A +VF+
Sbjct: 62 FHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFD 121
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
+ +D+ AWN++++ YA+ G + AR LFD+MP ++SW+ +I+GY G Y EALD+
Sbjct: 122 DSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDL 181
Query: 237 FRQMQM-----VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
FR+MQ+ + P+E ++ +VL AC +LG+LE G+W+H Y DK H+ V+ ALI
Sbjct: 182 FREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALI 241
Query: 292 EMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPN 349
+MY KCG + +A ++F+ + ++DV ++S +I LA +G + LF EM + PN
Sbjct: 242 DMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPN 301
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF+G+L AC H G NEG YF M + I I+HYGC+VDL GR+G + +A + I
Sbjct: 302 SVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 361
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
MPM+PD IWGSLLS R +++ A++ L+ L+P ++G YVLLSN+YAK GRW
Sbjct: 362 ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWM 421
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAK 529
+V +R + K + K PGCS +EV V EFV GD+++ + I+ +L+ + A
Sbjct: 422 EVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAG 481
Query: 530 DVID 533
V D
Sbjct: 482 YVTD 485
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 15/236 (6%)
Query: 20 ILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV-KEP 75
+L +C L L++ +H I KY + L T +ID+ G L A +F + +
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+V Y+AMI +YGL + Q+ + T I P+ T ++ +C +
Sbjct: 265 DVKAYSAMICCLA---MYGLTDECF-QLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 136 GKQ-IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLISGY 193
GK + +FG+ ++DLYG+ + EA M + D++ W +L+SG
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 194 ARLGQMKKA----RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
LG +K + L + P + ++ + + Y G + E + +M++ GI
Sbjct: 381 RMLGDIKTCEGALKRLIELDPMNS-GAYVLLSNVYAKTGRWMEVKCIRHEMEVKGI 435
>gi|296081958|emb|CBI20963.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 194/410 (47%), Positives = 245/410 (59%), Gaps = 113/410 (27%)
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
+C +LGKQ+H H KFG KS+++ EN+L+++Y KCD L +AH+VFEEMT+RD
Sbjct: 1 MCYNLGKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERD-------- 52
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
TI SWTA+ I
Sbjct: 53 ---------------------ATIFSWTAI-----------------------------I 62
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
S+VSVLPACAQLG+LELG+WIH+Y DK L
Sbjct: 63 SLVSVLPACAQLGALELGKWIHIYADKAGFL----------------------------- 93
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
RD+ W LANHG+A +MQ+ KV PN ITF+GLLSACAH G NEGL
Sbjct: 94 --RDICVW------LANHGRA--------QMQKAKVEPNIITFVGLLSACAHAGLLNEGL 137
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
YF+SM+RD +IE +EHYGCLV+LLG +GRLDQAL +I++MPMKPD+ IWG L SSCR+
Sbjct: 138 GYFESMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRS 197
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ NLEI IAMEHLL LEP+DTGNY+ G+W+ VSRMRKL+ SK M KTPGCS
Sbjct: 198 HGNLEIVAIAMEHLLELEPDDTGNYL---------GKWDGVSRMRKLMSSKYMNKTPGCS 248
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA-KDVIDIMYEDI 539
IEV+N VQE+ SGDD+KPF K I+ +L+LL +HQ + D+I+IM + I
Sbjct: 249 SIEVDNMVQEYASGDDSKPFSKAIYRVLKLLVMHQSKMDDDIIEIMGKKI 298
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 262/444 (59%), Gaps = 38/444 (8%)
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
G +LP LP KSCA LG+QIH+ + GL + ++ + +Y +C
Sbjct: 5 GPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPD 64
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLG------------------------------QM 199
+A+++FEEM RD+V+WN +ISG+A G M
Sbjct: 65 DAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSM 124
Query: 200 KKARM--------LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
KAR+ +FD+M + ++SW AM++ YT+ + EA+++F +MQ GIEPD ++
Sbjct: 125 GKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVT 184
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+ +VLP+C ++ +L LG+ IH + + ++ NAL++MY CGC+ +A +FD M
Sbjct: 185 LATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMG 244
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
RDVVSW+++I HG +AI LF +M + P+ I F+ +L+AC+H G + G
Sbjct: 245 TRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKH 304
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
YF SM + HI K+EHY C+VDLLGRAG + +A + I MP+KP+ ++WG+LL +CR +
Sbjct: 305 YFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIH 364
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
SN++I ++A + LL L P+ TG YVLLSNIYA+ GRW DVS +R ++ SK +KK PG S
Sbjct: 365 SNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSN 424
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIF 515
E+ + V F GD + P K I+
Sbjct: 425 AELGDRVHTFHIGDTSHPQSKMIY 448
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 149/311 (47%), Gaps = 41/311 (13%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
D+A +F +++ + +NAM+ YTNN ++ A+ L+ +M +D I PD TL
Sbjct: 131 DIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDG-----IEPDAVTL 185
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
V+ SC + SLGK+IH + + + S + ENAL+D+Y C L EA VF+ M
Sbjct: 186 ATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGT 245
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+V+W ++IS Y R G ++A +D+F +M
Sbjct: 246 RDVVSWTSIISAYGRHGHGREA-------------------------------IDLFEKM 274
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGE-WIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
G+EPD I+ V++L AC+ G L++G+ + + + H+ + ++++ + GC
Sbjct: 275 CGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGC 334
Query: 300 INQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I +A M ++ + W ++G H ++ I L L++ P + LLS
Sbjct: 335 IREAYDFIMVMPIKPNERVWGALLGACRIH--SNMDIGLLAADSLLRLAPKQTGYYVLLS 392
Query: 359 AC-AHTGFWNE 368
A G W +
Sbjct: 393 NIYARAGRWAD 403
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/546 (35%), Positives = 300/546 (54%), Gaps = 58/546 (10%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSN---FLVTKMIDVCNSGG 60
+ G+ + R + ++C ++ +LK++H L+ + FL K++ + +S
Sbjct: 95 KYGSSTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFS 154
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFT 119
D+ YA +F ++ + F++N +IRA ++ A LY++ML + PDK T
Sbjct: 155 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS----PDKHT 210
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
PFV+K+CA + S GKQ+H + K G N L+ LYG C
Sbjct: 211 FPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC-------------- 256
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
G + AR +FD+MP ++VSW +MI G Y AL +FR+
Sbjct: 257 -----------------GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE 299
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY----CDKNHLLRRTVICNALIEMYI 295
MQ EPD ++ SVL ACA LGSL LG W H + CD + + ++ N+LIEMY
Sbjct: 300 MQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD-VAMDVLVKNSLIEMYC 357
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITF 353
KCG + A Q+F M +RD+ SW+ +I G A HG+A +A++ F M +R V PN +TF
Sbjct: 358 KCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTF 417
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
+GLL AC H GF N+G YFD M RD+ IE +EHYGC+VDL+ RAG + +A++++ MP
Sbjct: 418 VGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMP 477
Query: 414 MKPDAKIWGSLLSS-CRTYSNLEIAVIAMEHLLVLEPED-------TGNYVLLSNIYAKH 465
MKPDA IW SLL + C+ +++E++ +++ + ++ +G YVLLS +YA
Sbjct: 478 MKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASA 537
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQ 525
RW DV +RKL+ ++K PGCS IE+N EF +GD + P K I+ L+++
Sbjct: 538 SRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVI---D 594
Query: 526 DRAKDV 531
DR + +
Sbjct: 595 DRLRSI 600
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 180/472 (38%), Positives = 280/472 (59%), Gaps = 46/472 (9%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G +A A +F ++ +V +NAMI Y A+ L+K+M++
Sbjct: 158 TALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK---- 213
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ V+ +CA LG+Q+H+ + G S+ NAL+DLY KC
Sbjct: 214 -TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKC---- 268
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LF+ + Y ++SW +I GYTH+
Sbjct: 269 ---------------------------GEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
Y EAL +F++M G P++++++S+LPACA LG++E+G WIH+Y +K R + NA
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK----RLKGVANA 357
Query: 290 ------LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
LI+MY KCG I A Q+FD ++ R + SW+ +I G A HG+A+ A +F M++
Sbjct: 358 SSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK 417
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
++ P+DITF+GLLSAC+H+G + G F SMK D+ I K+EHYGC++DLLG +G
Sbjct: 418 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 477
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A +I M M+PD IW SLL +C+ + N+E+ ++L+ +EP++ G+YVLLSNIYA
Sbjct: 478 EAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYA 537
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
GRW +V+++R L+ K MKK PGCS IE+++ V EF+ GD P ++I+
Sbjct: 538 TAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 589
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 224/390 (57%), Gaps = 15/390 (3%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
L+ IH Q++K L +N+ ++K+I+ C L YA +F+ ++EPN+ ++N M R
Sbjct: 3 LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
+ + A+ LY M+ SL +LP+ +T PF++KSCA G+QIH HV K
Sbjct: 63 HALSSDPVSALYLYVCMI------SLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLK 116
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
G +L+ +Y + L +A KVF++ + RD+V++ LI+GYA G + A+ +
Sbjct: 117 LGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKM 176
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
FD++P +VSW AMISGY G+ EAL++F++M + PDE ++VSV+ ACAQ S+
Sbjct: 177 FDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASI 236
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
ELG +H + D + I NALI++YIKCG + A LF+ + +DV+SW+T+IGG
Sbjct: 237 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGY 296
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MYFDSMKRDHHI 382
+ +A+ LF EM R PND+T + +L ACAH G G +Y + KR +
Sbjct: 297 THMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYIN--KRLKGV 354
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
+ H L+D+ + G ++ A + + +
Sbjct: 355 ANASSHRTSLIDMYAKCGDIEAAQQVFDSI 384
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 186/495 (37%), Positives = 280/495 (56%), Gaps = 44/495 (8%)
Query: 20 ILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L++C IE +IH +K LS + F+ ++ G + +F Q +
Sbjct: 144 LLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWD 203
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ + +I+AY+ AI + +M D+ TL V+ +C+ L +LG
Sbjct: 204 LISWTTLIQAYSKMGYPSEAIAAFFRMN--------CTADRMTLVVVLSACSQLGDFTLG 255
Query: 137 KQIHAHVCK--FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
K+I A++ F + S NALLD+Y KC
Sbjct: 256 KKILAYMDHHLFDVHSDVFLGNALLDMYLKC----------------------------- 286
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
GQ AR LF MP +VSW +MISG H G + EAL +FR+MQ +G++PD +++V
Sbjct: 287 --GQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVG 344
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
VL +CA LG LELG+W+H Y DKNH+ + NAL++MY KCG I+QA +F M +D
Sbjct: 345 VLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKD 404
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V S++ +I G A HGKA +A+ +F EM R+ V P+ +T +G+LSAC+H G EG +F
Sbjct: 405 VYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQ 464
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
M R +H++ + EHYGC+VDLLGRAG + +A +MP+ PDA +WGSLL +C+ ++ +
Sbjct: 465 DMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKV 524
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E+ ++ L+ +EPE G Y+L+SNIY+ RW D + RK ++ ++KKTPGCS IEV
Sbjct: 525 ELGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEV 584
Query: 495 NNEVQEFVSGDDTKP 509
+ V EF G+ + P
Sbjct: 585 DGMVHEFRKGEKSHP 599
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 211/418 (50%), Gaps = 68/418 (16%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNF------LVTKM-------IDVCNSGGDLAYAS 66
+L SC+++ E+K+IH I+K ++S L TK+ + + +S +L YAS
Sbjct: 32 LLSSCKSVREIKQIHASIIKANTTRSTTTLPIISLCTKITSLLQQDVHLADSIQNLWYAS 91
Query: 67 LLFKQVKEPNVFLYNAMIRAY-TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
L + V+++NA+I++ T+N+ + +LY+QML + PD +TLP+++K
Sbjct: 92 SLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLS-----PDTYTLPYLLK 146
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+C+ QIHAH K GL S+ +N L+ Y + KVF++ D+++
Sbjct: 147 ACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLIS 206
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W LI Y+++G +A F +M T
Sbjct: 207 WTTLIQAYSKMGYPSEAIAAFFRMNCTA-------------------------------- 234
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL---RRTVICNALIEMYIKCGCINQ 302
D +++V VL AC+QLG LG+ I Y D +HL + NAL++MY+KCG +
Sbjct: 235 --DRMTLVVVLSACSQLGDFTLGKKILAYMD-HHLFDVHSDVFLGNALLDMYLKCGQPHL 291
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
A QLF M +++VSW+++I GLA+ G +A+H+F MQ + + P+ +T +G+L++CA+
Sbjct: 292 ARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCAN 351
Query: 363 -----TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
G W + + MK D ++ + LVD+ + G +DQA + + M K
Sbjct: 352 LGDLELGKWVHSYIDKNHMKADGYVAN------ALVDMYAKCGSIDQAFMVFQAMKCK 403
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT 284
T ++ ++RQM ++G+ PD ++ +L AC+Q + IH + K L
Sbjct: 114 TSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNL 173
Query: 285 VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
+ N L+ Y G I ++FDQ D++SW+T+I + G +AI F R+
Sbjct: 174 FVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFF---RM 230
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH---IEHKIEHYGCLVDLLGRAGR 401
+ +T + +LSAC+ G + G M DHH + + L+D+ + G+
Sbjct: 231 NCTADRMTLVVVLSACSQLGDFTLGKKILAYM--DHHLFDVHSDVFLGNALLDMYLKCGQ 288
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLS 426
A + MP+K + W S++S
Sbjct: 289 PHLARQLFHLMPVK-NLVSWNSMIS 312
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 180/476 (37%), Positives = 276/476 (57%), Gaps = 13/476 (2%)
Query: 60 GDLAYASLLFKQVK----EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP 115
GD A L +Q++ EPNV +N ++ + G A++ ++R G P
Sbjct: 97 GDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRS---GRALDAVTALVRMHSEG--FFP 151
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
D + + + + S+GKQ+H +V K G + + AL+D+YGKC E +VF
Sbjct: 152 DATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVF 211
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM----PYTTIVSWTAMISGYTHIGSYA 231
E + D+ + N L++G +R Q+ +A +LF + +VSWT++++ G
Sbjct: 212 HESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDL 271
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EA+D+FR MQ +G+EP+ ++I VLPA A + +L G H + + L + +AL+
Sbjct: 272 EAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALV 331
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
+MY KCG A +FD M R+VVSW+ +IGG A HG A A+ LF MQ+ K P+ +
Sbjct: 332 DMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLV 391
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
TF +L AC+ G EG YF+ M++ H I ++EHY C+V LLGR+G+LD+A ++I E
Sbjct: 392 TFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINE 451
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MP +PD+ IWGSLL SCR Y N+ +A +A E L LEP + GNYVLLSNIYA W+ V
Sbjct: 452 MPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGV 511
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
+R+R +++ +KK GCS IE+ N+V ++GD++ P + I L L + +R
Sbjct: 512 NRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNR 567
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 150/363 (41%), Gaps = 44/363 (12%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
PD LP +KSC L + +HA GL ++LL Y + A V
Sbjct: 18 PDPHLLPSALKSCPA---QPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSV 74
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT----TIVSWTAMISGYTHIGSY 230
F+ M ++++V W+ LI+GY+ G + A L ++M +++W ++SG G
Sbjct: 75 FDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRA 134
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
+A+ +M G PD + L A + + +G+ +H Y K + AL
Sbjct: 135 LDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTAL 194
Query: 291 IEMYIKCGCINQASQLFDQM-----------------------------------VERDV 315
I+MY KCG ++ ++F + VE +V
Sbjct: 195 IDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNV 254
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSW++++ +G+ +A+ LF MQ + V PN +T +L A A+ G
Sbjct: 255 VSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCF 314
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
R + H + LVD+ + G+ A I + MP + + W +++ + +
Sbjct: 315 SLRKGFL-HDVYVGSALVDMYAKCGKARHARTIFDAMPSR-NVVSWNAMIGGYAMHGDAA 372
Query: 436 IAV 438
AV
Sbjct: 373 NAV 375
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
++ V PD + S L +C + L +H + L + ++L+ YI+ G
Sbjct: 11 LRHVSFPPDPHLLPSALKSCP---AQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGA 67
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
A +FD+M E++VV WS +I G + G A A L +M+ V PN IT+ GL+S
Sbjct: 68 TGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSG 127
Query: 360 CAHTG 364
+G
Sbjct: 128 LNRSG 132
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 184/502 (36%), Positives = 285/502 (56%), Gaps = 55/502 (10%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS--GGDLAYASLLFKQVKEPNV 77
+LQ C N+ EL++IH Q+LK L +K++ C S G LAYA +F ++ PN
Sbjct: 24 LLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNT 83
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F++N MIR Y+N+ A+ LY ML + + +T PF++K+C+ + +
Sbjct: 84 FMWNTMIRGYSNSKEPEEALLLYHHMLYHS-----VPHNAYTFPFLLKACSSMSALEETQ 138
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIHAH+ K G S T N+LL++Y K G
Sbjct: 139 QIHAHIIKMGFGSEIYTTNSLLNVYSKS-------------------------------G 167
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+K AR+LFD++ EAL++F +MQ GI+ D +++VS L
Sbjct: 168 DIKSARLLFDQVDQRD-----------------TEALNLFHRMQTAGIKLDNVALVSTLQ 210
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACA LG L+ G+WIH Y K+ + ++ LI+MY KCG + +A ++F +M E+ V
Sbjct: 211 ACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSV 270
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G A HG+ +A+ F +MQ V PN +TF G+L+AC+H G +E + F+SM+
Sbjct: 271 WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESME 330
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
R H + IEHYGC+VDLLGRAG L +A +IE MP+KP+A IWG+LL++C + NLE+
Sbjct: 331 RIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELG 390
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
+ L+ ++P G Y+ L++I+A G W +R+R+ ++ + + K PGCS+I VN
Sbjct: 391 KQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGT 450
Query: 498 VQEFVSGDDTKPFLKDIFWLLE 519
EF++GD++ P +K+I +LE
Sbjct: 451 AHEFLAGDESHPQIKEIDHMLE 472
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 195/521 (37%), Positives = 301/521 (57%), Gaps = 49/521 (9%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSN--FLVTKMIDVCNSGGDLA----YAS 66
LE R V +++ C L L+ H L+ L + F ++K++ C + YA
Sbjct: 19 LEARVVSLVRRCPGLRALRGAHAHFLRLRLPRLTYAFALSKLLASCAAASATTVASSYAR 78
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAIN-----LYKQMLRDPRTGSLILPDKFTLP 121
LF Q+ EP F YN++IRA + + + LY++ML GS P+ FTL
Sbjct: 79 ALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLH---AGSPA-PNSFTLA 134
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
FV+K+C L G+Q+HA GL+ + LL+LY +C+E+ A VF+ M +
Sbjct: 135 FVLKACTAL---GEGQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVE- 190
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
DK +V+W++MI GY+ +G EAL +FR MQ
Sbjct: 191 -------------------------DK----NLVAWSSMIGGYSRMGMVNEALGLFRDMQ 221
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
VG+ PDE+++VSV+ ACA+ G+L+LG+W+H + D+ + + ALI+MY KCG I
Sbjct: 222 AVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGLIE 281
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+A +FD MVERD +WS +I GLA HG A A+ LF M +LKV PN++TF+G+LSACA
Sbjct: 282 RAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACA 341
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H+G ++G Y+ +M+ + IE +E+YGC+VDLL R+G LD+A + + MP+ P++ IW
Sbjct: 342 HSGLVDDGRRYWCTMQ-ELGIEASMENYGCMVDLLCRSGLLDEAFSFVTGMPISPNSVIW 400
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
+LL + ++ + ++I +A L LEP++ NYVLLSN+YA + +W+ V MRK ++
Sbjct: 401 RNLLVASKSSNRIDIVELASRRLFELEPQNPENYVLLSNLYALNSQWDRVRYMRKKMKDN 460
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
++ GCS IE+N + +FV D + P +K I +L +A
Sbjct: 461 NVTVVAGCSSIEINGYLHKFVVSDGSHPEIKKIRLVLREIA 501
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 177/479 (36%), Positives = 289/479 (60%), Gaps = 9/479 (1%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMI 84
+++ +KIH LK F+ +I + G L +A +F + + ++ +N +I
Sbjct: 130 SDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLI 189
Query: 85 RAYTNNHLYGLAINLYKQMLR--DPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
Y+ N YK++LR D T + I D T+ +I +C+ L + +
Sbjct: 190 CGYSQ-------YNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKY 242
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
+ + L+ N L+D+YG+ A VF+ M +R+IV+WN L+ G+A++G + A
Sbjct: 243 IKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAA 302
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R LFD MP ++SWT+MI+GY+ +++A+ +F++M ++PD++++ SVL ACA L
Sbjct: 303 RKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHL 362
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
G L++G +H Y ++ + + N+LI+MY KCG + +A ++F +M ++D VSW++VI
Sbjct: 363 GKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVI 422
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
GLA +G A+ A+ LF +M R V P TF+G+L ACAH G N+GL YF+SM+ H +
Sbjct: 423 SGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGL 482
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
++HYGC+VDLL R+G +D+A I++MP+ PD +W LLS+C+ + N+ +A IA +
Sbjct: 483 VPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATK 542
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
LL L+P D+GNYVLLSN YA RW+D +MR+L+ ++K G S IEV+ V +
Sbjct: 543 RLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEVDGMVSNY 601
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 210/402 (52%), Gaps = 18/402 (4%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCN-SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
K++H +++ L FL++ +I + S +L A L+F Q++ P + ++N MIR +
Sbjct: 34 KELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQ 93
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
+ AI++Y +M TG + TL F+ K+CA + G++IH H K G +
Sbjct: 94 SDHPVEAIHMYTRMHHQGITG-----NNLTLIFLFKACARVSDIVSGRKIHVHALKLGFE 148
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
S+ NAL+ +Y C +L A K+F+ M DRD+V+WN LI GY++ + K+ LFD M
Sbjct: 149 SYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAM 208
Query: 210 PYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
I V+ +I +H+G + A + + ++ +E D +++ +
Sbjct: 209 TAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLA 268
Query: 266 ELGEWIHMYCDKNHLLRRTVIC-NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
EL + + + + R ++ NAL+ + K G + A +LFD M +RDV+SW+++I G
Sbjct: 269 ELAQGVF-----DRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITG 323
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
+ + A+ LF EM KV P+ +T +LSACAH G + G ++R H ++
Sbjct: 324 YSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRR-HGVQA 382
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
I L+D+ + G +++AL + M K D+ W S++S
Sbjct: 383 DIYVGNSLIDMYCKCGMVEKALEVFHRMKDK-DSVSWTSVIS 423
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 125/243 (51%), Gaps = 8/243 (3%)
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ KA ++F+++ T+V W MI G + EA+ ++ +M GI + ++++ +
Sbjct: 65 NLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFK 124
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACA++ + G IH++ K + NALI MY CG + A ++FD M++RD+VS
Sbjct: 125 ACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVS 184
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+T+I G + + K + + LF M + + +T + ++ AC+H G W + DSM
Sbjct: 185 WNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWE----FADSMV 240
Query: 378 ---RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+++++E + L+D+ GR + A + + M + + W +L+ NL
Sbjct: 241 KYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRER-NIVSWNALVMGHAKVGNL 299
Query: 435 EIA 437
A
Sbjct: 300 TAA 302
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 193/536 (36%), Positives = 306/536 (57%), Gaps = 53/536 (9%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+ C+ L LK++H ++ L + +++++ + +S +A +F + P +FL
Sbjct: 15 LLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLI-SSTIVFTHALSIFNHIPNPTIFL 73
Query: 80 YNAMIRAYTN--NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
YN +I + N H + +A +LY ++L T + + P+ FT P + K+C G+
Sbjct: 74 YNTLISSLANIKPHTH-IAFSLYSRVL----THTTLKPNGFTFPSLFKACGSQPWLRHGR 128
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+H HV KF L CD ++A L++ YA+ G
Sbjct: 129 ALHTHVLKF--------------LEPTCDPFVQA----------------ALLNYYAKCG 158
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTH--------IGSYAEALDVFRQMQMVGIEPDE 249
++ R LF+++ + SW +++S Y H + E L +F +MQ I+ +E
Sbjct: 159 KVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANE 218
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+++V+++ ACA+LG+L G W H+Y K++L + ALI+MY KCGC++ A QLFDQ
Sbjct: 219 VTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQ 278
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
+ RD + ++ +IGG A HG H+A+ LF +M + P+D+T + + +C+H G EG
Sbjct: 279 LPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEG 338
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
F+SMK + +E K+EHYGCLVDLLGRAGRL +A + MPMKP+A IW SLL + R
Sbjct: 339 CDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAAR 398
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ NLEI + ++HL+ LEPE +GNYVLLSN+YA RW+DV R+RKL++ + K PG
Sbjct: 399 VHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGS 458
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL------HQDRAKDVI-DIMYED 538
SL+EV + EF+ GD T P K+I+ LE ++ H+ R +V+ DI E+
Sbjct: 459 SLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEEE 514
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 268/441 (60%), Gaps = 9/441 (2%)
Query: 85 RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA----GLLCPSLGKQIH 140
RA L+ A +L M+ P + P+ TL V+ +CA L L +H
Sbjct: 41 RAARQGDLHAAAASLCA-MVSSPAAPA---PNDVTLLTVLSACADSPSSPLASPLALTLH 96
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
A K SH + L Y A ++F+ M R +V +N +ISG R G +
Sbjct: 97 ARALKL-FPSHLLLSTCLARFYLASRLPHLALQLFDSMPVRSVVTYNTMISGLMRNGLVD 155
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
A +FD MP VSWTA+I G+ G + EA+D FR M + G+E D I++V+V+ ACA
Sbjct: 156 AAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETDYITLVAVVSACA 215
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
++G+L LG W+H + L R + N+LI+MY +CG +N A+Q+F + +R VVSW++
Sbjct: 216 EVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQVFRSIRKRTVVSWNS 275
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
+I G A +G+ AI LF EM+R P+ +T G+L+AC+H G GL Y+D M ++
Sbjct: 276 MIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEY 335
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
+ ++EHYGC+VDLLGRAGRLD+A++++E MPM+P+ + G+LL+ CRT+ NL++A
Sbjct: 336 GVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRTHGNLDMAEQM 395
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQE 500
M+HL L+P+ NYVLLSNIYA G+W+ ++R L++++ +KK PG S +E++ +V E
Sbjct: 396 MQHLFELDPQGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSTVEIDGDVHE 455
Query: 501 FVSGDDTKPFLKDIFWLLELL 521
FVSGD + P +I +L LL
Sbjct: 456 FVSGDQSHPLAGEIGQMLGLL 476
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 17/240 (7%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V ++ +C + L +H +L+ L ++ + +ID+ G + A+ +F+ ++
Sbjct: 207 LVAVVSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQVFRSIR 266
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLL 131
+ V +N+MI + N AI L+++M R PD TL V+ +C AGL
Sbjct: 267 KRTVVSWNSMIVGFAANGRCTDAIELFEEMRRQG-----FKPDAVTLTGVLTACSHAGLT 321
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNNLI 190
L + ++G+ + ++DL G+ L EA V E M R + V L+
Sbjct: 322 EHGL-RYYDLMTTEYGVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALL 380
Query: 191 SGYARLGQMKKARM----LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
+G G + A LF+ P ++ + + Y +G + A V M+ G++
Sbjct: 381 AGCRTHGNLDMAEQMMQHLFELDPQGD-ANYVLLSNIYAAVGKWDGAGKVRSLMKARGVK 439
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/492 (36%), Positives = 281/492 (57%), Gaps = 6/492 (1%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H LK F+ ++ S G L + F ++ NV +N+MI Y
Sbjct: 67 VHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGD 126
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
A L+ +M R L D+FTL ++ +C+ G+ +H + G
Sbjct: 127 TREACALFGEMRRQG-----FLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDL 181
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
I AL+D+Y KC +L A + FE M + +V+W +++ + G + AR FD MP
Sbjct: 182 ILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPER 241
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
VSW MIS Y G Y EALD+++QMQ G PDE ++V VL AC ++G L +G+ +H
Sbjct: 242 NTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVH 301
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+Y N + N+L++MY KCG ++ A +LF +M R+VVSW+ +IGGLA HG+A
Sbjct: 302 LYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRAL 361
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
AI F M R P+ ITF+ LLS+C+H G G YF+SM+ ++++H++EHY C+
Sbjct: 362 DAITFFRSMVR-NTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACM 420
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VDLLGR G L++A+ +I+EMPMKPD +WG+LL +CR + N++I ++ LL LE
Sbjct: 421 VDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGISG 480
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLK 512
G +VL+SN+ + +WED+ R+RKL++ + +K G S IE+NN + EF D
Sbjct: 481 GLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSIHEFGVEDIRHESSS 540
Query: 513 DIFWLLELLALH 524
+I+ +++ L+ H
Sbjct: 541 EIYAVVDQLSYH 552
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 168/376 (44%), Gaps = 68/376 (18%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F + +P+ +YN + RAY N+ A+ L++ MLR +LP++FTLPFV+K+C
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRG-----VLPNEFTLPFVVKAC 55
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+H K G NALL Y L ++ + F+EM R++V+WN
Sbjct: 56 TRAQAWDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWN 115
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
++I GYA+ G + EA +F +M+ G
Sbjct: 116 SMIGGYAQAGDTR-------------------------------EACALFGEMRRQGFLG 144
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC---------- 297
DE ++ S+L AC+Q G+LE G +H + ++ AL++MY KC
Sbjct: 145 DEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCF 204
Query: 298 ---------------------GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
G ++ A FD M ER+ VSW+T+I G+ H+A+
Sbjct: 205 EMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALD 264
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
L+ +MQ P++ T + +LSAC G G M ++ + H I L+D+
Sbjct: 265 LYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIH-NPDISLINSLLDMY 323
Query: 397 GRAGRLDQALNIIEEM 412
+ G++D A+ + EM
Sbjct: 324 AKCGQVDTAIRLFREM 339
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 17/282 (6%)
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+FD + V + + Y + EAL + R M G+ P+E ++ V+ AC + +
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
+ +H K + + + NAL+ Y G + + + FD+M R+VVSW+++IGG
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-----LMYFDSMKRD 379
A G +A LF EM+R ++ T LL AC+ G G LM D
Sbjct: 121 YAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVD 180
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
+ G LVD+ + G L A E MP+K W S+L + + +++ A
Sbjct: 181 LILG------GALVDMYSKCGDLCMARRCFEMMPIKSVVS-WTSMLCAQTKHGSVDAARC 233
Query: 440 AMEHLLVLEPE-DTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
+H+ PE +T ++ + + Y + G++ + + K ++S
Sbjct: 234 WFDHM----PERNTVSWNTMISCYVQRGQYHEALDLYKQMQS 271
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 288/488 (59%), Gaps = 13/488 (2%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F IL +C +L L + H +I+K + F+ ++D+ G + +A LF ++ + +
Sbjct: 169 FASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRD 228
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +NAMI Y N L A+ L+++ +P + + + C +
Sbjct: 229 VVSWNAMIAGYVQNGLIEDALKLFQE-----------IPKRDVITWNTMMAGYAQCGDVE 277
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ + + + + ++ N ++ Y + + EA K+F+ M +R++++WN +ISG+A+
Sbjct: 278 NAVE--LFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQN 335
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
GQ+++A LF MP +VSW AMI+GY+ G AL +F QMQMV ++P+ + VL
Sbjct: 336 GQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVL 395
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
PACA L LE G H ++ ++ N L+ MY KCG I A ++FD+M ++D
Sbjct: 396 PACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSA 455
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
S S +I G A +G + +++ LF +MQ + P+ +TF+G+LSAC H G +EG YFD M
Sbjct: 456 SLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIM 515
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
R +HI +EHYGC++DLLGRAG D+A ++I +MP+KPDA +WGSLLS+CRT++N+++
Sbjct: 516 TRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDL 575
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+HL+ L P++ YVLLSNIYA GRW+D+ +R ++ + +KK GCS I +
Sbjct: 576 GEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKK 635
Query: 497 EVQEFVSG 504
+V F+ G
Sbjct: 636 QVHAFLVG 643
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 206/422 (48%), Gaps = 27/422 (6%)
Query: 20 ILQSCEN---LIELKKIHTQILKYLLS-QSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
+LQ C N L + K +H +++ Q L K++ + G L A +F ++
Sbjct: 70 LLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVK 129
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
NV + AMI AY + A+ + +M I P+ FT ++ +C L L
Sbjct: 130 NVVSWTAMIAAYARHEHGQEALGFFYEM-----QDVGIQPNHFTFASILPACTDL--EVL 182
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G + H + K G +S+ N L+D+Y K + A ++F++M RD+V+WN +I+GY +
Sbjct: 183 G-EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQ 241
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G ++ A LF ++P +++W M++GY G A+++F +M E + +S ++
Sbjct: 242 NGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMP----EQNLVSWNTM 297
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALIEMYIKCGCINQASQLFDQMVERD 314
+ Q GS++ E ++ + R VI NA+I + + G + +A +LF M E +
Sbjct: 298 IAGYVQNGSVK--EAFKLF---QIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECN 352
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VVSW+ +I G + +G+A A+ LF +MQ + + PN TF +L ACA +G +
Sbjct: 353 VVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHE 412
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK----IWGSLLSSCRT 430
+ R + + LV + + G ++ A + + M + A I G ++ C
Sbjct: 413 VVIRS-GFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSK 471
Query: 431 YS 432
S
Sbjct: 472 ES 473
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 183/373 (49%), Gaps = 34/373 (9%)
Query: 147 GLKSHSITENALLD--LYGKC---DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
G+ HS T ++LL L K +L+ AH + + +DI N L+S Y +LG + +
Sbjct: 59 GIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVE 118
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
AR +FD+MP +VSWTAMI+ Y EAL F +MQ VGI+P+ + S+LPAC
Sbjct: 119 ARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTD 178
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
L LGE+ H K + N L++MY K GCI A +LFD+M +RDVVSW+ +
Sbjct: 179 LEV--LGEF-HDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAM 235
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I G +G A+ LF E+ + V IT+ +++ A G + F+ M
Sbjct: 236 IAGYVQNGLIEDALKLFQEIPKRDV----ITWNTMMAGYAQCGDVENAVELFEKMP---- 287
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
E + + ++ + G + +A + + MP + + W +++S +E A+
Sbjct: 288 -EQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPER-NVISWNAVISGFAQNGQVEEAL--- 342
Query: 442 EHLLVLEPE-DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT--------PGC--- 489
L PE + ++ + Y+++G+ E+ ++ ++ MK P C
Sbjct: 343 -KLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAAL 401
Query: 490 SLIEVNNEVQEFV 502
+++E NE E V
Sbjct: 402 AVLEQGNEAHEVV 414
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 190/515 (36%), Positives = 292/515 (56%), Gaps = 40/515 (7%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYAS 66
S E E++ + +++SC L +IH I++ L Q++F+ + + + D+ Y+S
Sbjct: 63 SRDESENQLISLIKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSS 122
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
+F Q+ +P+ YN MIRAY+ +H LY++M R + P+ + FV+KS
Sbjct: 123 QVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRG-----VPPNPLSSSFVMKS 177
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
C + G QIHA + + G +S ++ L+DLY CD+ EA KVF+E I W
Sbjct: 178 CIRISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDE-----IPQW 232
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV--G 244
+ VSW +IS H +AL +F MQ G
Sbjct: 233 DT--------------------------VSWNVLISCCIHNRRTRDALRMFDIMQSTADG 266
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
EPD+++ + +L ACA LG+LE GE +H Y +++ +CN+LI MY +CG + +A
Sbjct: 267 FEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAY 326
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+F +M ER+VVSWS +I G A HG +AI F +MQ+L V P+D T G+LSAC+H G
Sbjct: 327 SIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCG 386
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
++GLM+FD M + IE I HYGC+VDLLGRAG LDQA +I M +KPD+ +W +L
Sbjct: 387 LVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTL 446
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L +CR + + + + HL+ L+ ++ G+YVLL NIY+ G W+ V+ +RK ++ K ++
Sbjct: 447 LGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQ 506
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
+PGCS IE+ +V EFV D P +I+ +L+
Sbjct: 507 TSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLD 541
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 189/518 (36%), Positives = 297/518 (57%), Gaps = 15/518 (2%)
Query: 14 EDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F L +C L +L +IH I K ++ + ++D+ + G +A A F
Sbjct: 151 EYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFD 210
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ N+ +N++I Y N G A+ ++ M+ + + PD+ TL V+ +CA
Sbjct: 211 GMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNG-----VEPDEITLASVVSACASW 265
Query: 131 LCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
G QIHA V K ++ + NAL+D+Y KC + EA VF+ M R++V+ ++
Sbjct: 266 SAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSM 325
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+ GYAR +K AR++F M +VSW A+I+GYT G EA+ +F ++ I P
Sbjct: 326 VCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTH 385
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT------VICNALIEMYIKCGCINQA 303
+ ++L ACA L L+LG H K+ ++ + N+LI+MY+KCG +
Sbjct: 386 YTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDG 445
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+F++MVERDVVSW+ +I G A +G A+ +F +M P+ +T IG+LSAC+H
Sbjct: 446 CLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHA 505
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G EG YF SM+ + + +H+ C+VDLLGRAG LD+A ++I+ MPM+PD +WGS
Sbjct: 506 GLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGS 565
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL++C+ + N+E+ E L+ ++P ++G YVLLSN+YA+ GRW+DV R+RK +R + +
Sbjct: 566 LLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGV 625
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
K PGCS IE+ + V F+ D P KDI +L+ L
Sbjct: 626 IKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFL 663
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 2/308 (0%)
Query: 109 TGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL 168
G L D ++ SC ++IHA + K S +N L+D YGKC
Sbjct: 11 VGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYF 70
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
+A KVF+ M R+ ++N ++S + G++ +A +F MP SW AM+SG+
Sbjct: 71 EDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHD 130
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
+ EAL F M +E S S L ACA L L +G IH K+ L + +
Sbjct: 131 RFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGS 190
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY KCG + A + FD M R++VSW+++I +G A KA+ +F M V P
Sbjct: 191 ALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEP 250
Query: 349 NDITFIGLLSACAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
++IT ++SACA EGL ++ +KRD + + + LVD+ + R+++A
Sbjct: 251 DEITLASVVSACASWSAIREGLQIHARVVKRDKY-RNDLVLGNALVDMYAKCRRVNEARL 309
Query: 408 IIEEMPMK 415
+ + MP++
Sbjct: 310 VFDRMPLR 317
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 206/486 (42%), Gaps = 120/486 (24%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMID------------------- 54
F +L SC ++ I+ ++IH +I+K S F+ +++D
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81
Query: 55 ------------VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102
V G L A +FK + EP+ +NAM+ + + + A+ +
Sbjct: 82 QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M + +L ++++ + +CAGL ++G QIHA + K +AL+D+Y
Sbjct: 142 M----HSEDFVL-NEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY 196
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
KC + A + F+ M R+IV+WN+LI+ Y + G K
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGK--------------------- 235
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
AL+VF M G+EPDEI++ SV+ ACA ++ G IH K R
Sbjct: 236 ----------ALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYR 285
Query: 283 RT-VICNALIEMYIKCGCINQASQLFDQ-------------------------------M 310
V+ NAL++MY KC +N+A +FD+ M
Sbjct: 286 NDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNM 345
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC---------- 360
+E++VVSW+ +I G +G+ +A+ LF ++R + P TF LL+AC
Sbjct: 346 MEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGR 405
Query: 361 -AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
AHT G + + D + + L+D+ + G ++ + E M ++ D
Sbjct: 406 QAHTQILKHGFWFQSGEESDIFVGNS------LIDMYMKCGMVEDGCLVFERM-VERDVV 458
Query: 420 IWGSLL 425
W +++
Sbjct: 459 SWNAMI 464
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 187/527 (35%), Positives = 301/527 (57%), Gaps = 42/527 (7%)
Query: 14 EDRFVPILQSCENLIELKKIHTQI-LKYLLSQSNFLVTKMI-DVCNSGGDLAYASLLFKQ 71
+ R P + C +L +K++H + L+ LS + L + G +A+A L+F Q
Sbjct: 8 QRRQPPAWRRCRSLRHIKQMHAVMALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQ 67
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ P+ F+YN +IR + A++LY +MLR + PDK T PFV+++C +
Sbjct: 68 IPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGG-GGVRPDKLTFPFVLRACTAMG 126
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI---------------------- 169
G Q+HAHV K G +S + +NAL+ ++ C L
Sbjct: 127 AGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMIT 186
Query: 170 ---------EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
A +F+E +D+V+WN +I+ YA+ G M AR LFD++P +VSW M
Sbjct: 187 GCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVM 246
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
ISGY GS+ AL++F QMQ +G +PD ++++S+L ACA G L++G+ +H + +
Sbjct: 247 ISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLH--SSLSDM 304
Query: 281 LRRT----VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
R V+ NALI+MY KCG + A ++F M ++DV +W++++GGLA HG ++I
Sbjct: 305 FSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESID 364
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
+F +M + KV P++ITF+ +L AC+H G ++G +F+ M+ + +E I+HYGC+VD+L
Sbjct: 365 MFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDML 424
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
GRAG L +A I+ M +P++ IW +LLS+CR + +E+A A LL +++G+YV
Sbjct: 425 GRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYV 484
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE--VNNEVQEF 501
LLSNIYA G W +MRKL+ + K G + ++ V + +Q F
Sbjct: 485 LLSNIYASVGEWFGSEKMRKLMDDSGVNKEAGQTFVDGSVKDIIQSF 531
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 178/462 (38%), Positives = 268/462 (58%), Gaps = 4/462 (0%)
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
YA +F V P+ FL A++R L ++ + R LP F+
Sbjct: 90 YALNVFSAVSPPDPFLAAALLRFAFLTQPPLLPFRVFSHLRRAHGAELPFLPFAFST-LA 148
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+ A P+ V G H EN+L+ Y C ++ A KVF+EM ++D+
Sbjct: 149 KSATASRSLPAAAAAHAVSVLVGGFDRHRFVENSLIGAYVACGDVGAARKVFDEMVEKDV 208
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
++W +++ Y R G M+ A +F + P +V+WTAM++GY +AL+VF +M +
Sbjct: 209 ISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAEL 268
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G+ DE+S+ + ACAQLG+L W+ ++ V+ + L++MY KCG I++A
Sbjct: 269 GMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEA 328
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAH 362
S++F M E++V ++S++I GLA+HG+A +AI LF EM R V PN +TFIG+L+AC+H
Sbjct: 329 SKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACSH 388
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G EG YF MK + I +HY C+VDLLGRAG +D+AL+++ M + P +WG
Sbjct: 389 AGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWG 448
Query: 423 SLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
+LL +CR + EIA + EHL LEPE GNYVLLSNI A G+WE+VS++R L+R +
Sbjct: 449 ALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILMRKQR 508
Query: 483 MKKTPGCSLIEVNNE-VQEFVSGDDTKPFLKDI-FWLLELLA 522
+KK P SL E + V +F +GD+ P +I LLEL+A
Sbjct: 509 LKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLELVA 550
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 143/362 (39%), Gaps = 73/362 (20%)
Query: 42 LSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN-------HLYG 94
+ F+ +I + GD+ A +F ++ E +V + +++ AYT + ++G
Sbjct: 173 FDRHRFVENSLIGAYVACGDVGAARKVFDEMVEKDVISWTSIVVAYTRSGDMRSAEEVFG 232
Query: 95 ---------------------LAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ + + R G +I D+ +L I +CA L
Sbjct: 233 RCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVI--DEVSLTGAISACAQLGAL 290
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ + G ++ + + L+D+Y KC + EA KVF M ++++ ++++I+G
Sbjct: 291 RRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGL 350
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G+ +A LF +M + +EP+ ++ +
Sbjct: 351 ASHGRASEAIALFKEM------------------------------VNRANVEPNHVTFI 380
Query: 254 SVLPACAQLGSLELGE-WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-V 311
VL AC+ G + G + DK ++ ++++ + G +++A L M V
Sbjct: 381 GVLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSV 440
Query: 312 ERDVVSWSTVIGGLANHGKAH----KAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFW 366
W ++G HGK+ A HLF K+ P I ++ L + A G W
Sbjct: 441 TPHGGVWGALLGACRIHGKSEIAKVVAEHLF------KLEPESIGNYVLLSNILASAGKW 494
Query: 367 NE 368
E
Sbjct: 495 EE 496
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 296/534 (55%), Gaps = 58/534 (10%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSN---FLVTKMIDVCNSGGDLAYASLLFKQV 72
R + ++C ++ +LK++H L+ + FL K++ + +S D+ YA +F +
Sbjct: 50 RIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 109
Query: 73 KEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ + F++N +IRA ++ A LY++ML + PDK T PFV+K+CA +
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS----PDKHTFPFVLKACAYIF 165
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
S GKQ+H + K G N L+ LYG C
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC-------------------------- 199
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G + AR +FD+MP ++VSW +MI G Y AL +FR+MQ EPD +
Sbjct: 200 -----GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYT 253
Query: 252 IVSVLPACAQLGSLELGEWIHMY----CDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+ SVL ACA LGSL LG W H + CD + + ++ N+LIEMY KCG + A Q+F
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVD-VAMDVLVKNSLIEMYCKCGSLRMAEQVF 312
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLLSACAHTGF 365
M +RD+ SW+ +I G A HG+A +A++ F M +R V PN +TF+GLL AC H GF
Sbjct: 313 QGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGF 372
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
N+G YFD M RD+ IE +EHYGC+VDL+ RAG + +A++++ MPMKPDA IW SLL
Sbjct: 373 VNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Query: 426 SS-CRTYSNLEIAVIAMEHLLVLEPED-------TGNYVLLSNIYAKHGRWEDVSRMRKL 477
+ C+ +++E++ +++ + ++ +G YVLLS +YA RW DV +RKL
Sbjct: 433 DACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKL 492
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
+ ++K PGCS IE+N EF +GD + P K I+ L+++ DR + +
Sbjct: 493 MSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVI---DDRLRSI 543
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 192/504 (38%), Positives = 278/504 (55%), Gaps = 71/504 (14%)
Query: 17 FVPILQSCENL---IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL------ 67
F +L+SC + E K+IH +LK L F+ T +I++ G+L YA L
Sbjct: 135 FPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSS 194
Query: 68 -------------------------LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102
LF+++ + +NAMI Y + + A+ +++
Sbjct: 195 LRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQE 254
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M R + + P++ T+ V+ +CA LG + + + GL S+ NAL+D+Y
Sbjct: 255 MKR-----ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMY 309
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
KC G + KAR LF+ + I+SW MI
Sbjct: 310 SKC-------------------------------GDLDKARDLFEGICEKDIISWNVMIG 338
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL-L 281
GY+H+ SY EAL +FR+MQ +EP++++ VS+LPACA LG+L+LG+WIH Y DK L L
Sbjct: 339 GYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGL 398
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
T + +LI+MY KCG I A Q+F M + + SW+ +I GLA HG A+ A+ LF +M
Sbjct: 399 TNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQM 458
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+ P+DITF+G+LSAC+H G G F SM D+ I K++HYGC++DLLGRAG
Sbjct: 459 RDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGL 518
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
D+A +++ M MKPD IWGSLL +CR + N+E+ A +HL LEPE+ G YVLLSNI
Sbjct: 519 FDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNI 578
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKK 485
YA GRW+DV+R+R + K MKK
Sbjct: 579 YATAGRWDDVARIRTKLNDKGMKK 602
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 255/437 (58%), Gaps = 12/437 (2%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
+L +C++ LK+IH+QI+K L + F ++K+I+ C + G+L+YA LLF+ +++PN
Sbjct: 38 LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQ 97
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F++N MIR + + AI+ Y +ML + P+ +T PF++KSCA + GK
Sbjct: 98 FIWNTMIRGNSLSSSPVGAIDFYVRMLL-----CGVEPNSYTFPFLLKSCAKVGATQEGK 152
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIH HV K GL+S +L+++Y + EL A VF + + RD V++ LI+GY G
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ AR LF+++P VSW AMI+GY G + EAL F++M+ + P+E ++V+VL
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACAQ GSLELG W+ + + + L + NALI+MY KCG +++A LF+ + E+D++S
Sbjct: 273 ACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIIS 332
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +IGG ++ +A+ LF +MQ+ V PND+TF+ +L ACA+ G + G +
Sbjct: 333 WNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID 392
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA-KIWGSLLS--SCRTYSNL 434
+ + L+D+ + G ++ A + MKP + W +++S + ++N+
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG--MKPKSLGSWNAMISGLAMHGHANM 450
Query: 435 EIAVIAMEHLLVLEPED 451
+ + EP+D
Sbjct: 451 ALELFRQMRDEGFEPDD 467
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 170/364 (46%), Gaps = 49/364 (13%)
Query: 14 EDRFVPILQSC--ENLIELKK-IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E V +L +C +EL + + I + L + LV +ID+ + GDL A LF+
Sbjct: 264 ESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFE 323
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ E ++ +N MI Y++ + Y A+ L+++M + S + P+ T ++ +CA L
Sbjct: 324 GICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQ-----SNVEPNDVTFVSILPACAYL 378
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
LGK IHA++ K K +T +L W +LI
Sbjct: 379 GALDLGKWIHAYIDK---KFLGLTNTSL---------------------------WTSLI 408
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
YA+ G ++ A+ +F M ++ SW AMISG G AL++FRQM+ G EPD+I
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468
Query: 251 SIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+ V VL AC+ G +ELG + + + + +I++ + G ++A L
Sbjct: 469 TFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKN 528
Query: 310 M-VERDVVSWSTVIGGLANHGKAH----KAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
M ++ D W +++G HG A HLF E++ P N ++ L + A G
Sbjct: 529 MEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLF-ELE----PENPGAYVLLSNIYATAG 583
Query: 365 FWNE 368
W++
Sbjct: 584 RWDD 587
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 296/534 (55%), Gaps = 58/534 (10%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSN---FLVTKMIDVCNSGGDLAYASLLFKQV 72
R + ++C ++ +LK++H L+ + FL K++ + +S D+ YA +F +
Sbjct: 41 RIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 100
Query: 73 KEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ + F++N +IRA ++ A LY++ML + PDK T PFV+K+CA +
Sbjct: 101 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS----PDKHTFPFVLKACAYIF 156
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
S GKQ+H + K G N L+ LYG C
Sbjct: 157 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC-------------------------- 190
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G + AR +FD+MP ++VSW +MI G Y AL +FR+MQ EPD +
Sbjct: 191 -----GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYT 244
Query: 252 IVSVLPACAQLGSLELGEWIHMY----CDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+ SVL ACA LGSL LG W H + CD + + ++ N+LIEMY KCG + A Q+F
Sbjct: 245 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVD-VAMDVLVKNSLIEMYCKCGSLRMAEQVF 303
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLLSACAHTGF 365
M +RD+ SW+ +I G A HG+A +A++ F M +R V PN +TF+GLL AC H GF
Sbjct: 304 QGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGF 363
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
N+G YFD M RD+ IE +EHYGC+VDL+ RAG + +A++++ MPMKPDA IW SLL
Sbjct: 364 VNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 423
Query: 426 SS-CRTYSNLEIAVIAMEHLLVLEPED-------TGNYVLLSNIYAKHGRWEDVSRMRKL 477
+ C+ +++E++ +++ + ++ +G YVLLS +YA RW DV +RKL
Sbjct: 424 DACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKL 483
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
+ ++K PGCS IE+N EF +GD + P K I+ L+++ DR + +
Sbjct: 484 MSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVI---DDRLRSI 534
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 191/535 (35%), Positives = 298/535 (55%), Gaps = 72/535 (13%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL----------- 62
F +L+SC + LIE ++IH +LK ++ T +I + G L
Sbjct: 68 FPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSS 127
Query: 63 ------------AYASL--------LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102
YAS LF ++ +V +NAMI Y + A+ LYK
Sbjct: 128 HRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKD 187
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M++ + + PD+ T+ V+ +CA LG+Q+H+ + G S+ N L+DLY
Sbjct: 188 MMK-----TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLY 242
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
KC G+++ A LF + ++SW +I
Sbjct: 243 SKC-------------------------------GEVETACGLFQGLAKKDVISWNTLIG 271
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHL 280
G+TH+ Y EAL +F++M G P++++++SVLPACA LG++++G WIH+Y +K +
Sbjct: 272 GHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGV 331
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
+ + +LI+MY KCG I A Q+FD M+ R + SW+ +I G A HGKA+ A LF +
Sbjct: 332 TNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSK 391
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
M++ + P+DITF+GLLSAC+H+G + G F SM +D+ I K+EHYGC++DLLG G
Sbjct: 392 MRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCG 451
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSN 460
+A +I MPM+PD IW SLL +C+ ++N+E+ ++L+ +EPE+ G+YVLLSN
Sbjct: 452 LFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSN 511
Query: 461 IYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
IYA GRW+ V+++R L+ K +KK PGCS IE+++ V EF+ GD P ++I+
Sbjct: 512 IYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIY 566
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 202/353 (57%), Gaps = 8/353 (2%)
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTL 120
L+YA +F+ ++EPN+ ++N M R + N A+ LY M+ SL +LP+ ++
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMI------SLGLLPNSYSF 68
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PF++KSCA G+QIH HV K G +L+ +Y + L +AHKVF+ +
Sbjct: 69 PFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSH 128
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
R +V++ LI+GYA G + AR LFD++ +VSW AMISGY ++ EAL++++ M
Sbjct: 129 RHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDM 188
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
++PDE ++V+V+ ACAQ GS+ELG +H + + + I N LI++Y KCG +
Sbjct: 189 MKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEV 248
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A LF + ++DV+SW+T+IGG + +A+ LF EM R PND+T + +L AC
Sbjct: 249 ETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 308
Query: 361 AHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
AH G + G ++ KR + + L+D+ + G ++ A + + M
Sbjct: 309 AHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM 361
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 176/367 (47%), Gaps = 44/367 (11%)
Query: 9 SIKELEDRFVPILQSC--ENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
++K E V ++ +C IEL +++H+ I + + +V +ID+ + G++ A
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF+ + + +V +N +I +T+ +LY A+ L+++MLR + P+ T+ V+
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGES-----PNDVTMLSVLP 306
Query: 126 SCAGLLCPSLGKQIHAHVCKF--GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+CA L +G+ IH ++ K G+ + S +L+D+Y KC ++ A +VF+ M R +
Sbjct: 307 ACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSL 366
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
+WN +I G+A G+ A D+F +M+
Sbjct: 367 SSWNAMIFGFAMHGKANAA-------------------------------FDLFSKMRKN 395
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH-LLRRTVICNALIEMYIKCGCINQ 302
GI+PD+I+ V +L AC+ G L+LG I +++ + + +I++ CG +
Sbjct: 396 GIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKE 455
Query: 303 ASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
A ++ M +E D V W +++ H + +++ P N +++ L + A
Sbjct: 456 AKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIE-PENPGSYVLLSNIYA 514
Query: 362 HTGFWNE 368
G W++
Sbjct: 515 TAGRWDQ 521
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 21/332 (6%)
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV----SWTAMI 221
D L A +FE + + +++ WN + G+A A L+ M ++ S+ ++
Sbjct: 13 DGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLL 72
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
+ E + + +G + D S++ AQ G LE + H++
Sbjct: 73 KSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVV 132
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
T ALI Y G IN A +LFD++ +DVVSW+ +I G +A+ L+ +M
Sbjct: 133 SYT----ALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDM 188
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+ V P++ T + ++SACA +G G S DH I+ L+DL + G
Sbjct: 189 MKTNVKPDESTMVTVVSACAQSGSIELGRQ-LHSWIEDHGFGSNIKIVNVLIDLYSKCGE 247
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
++ A + + + K D W +L+ T+ NL + + ++ E + +LS +
Sbjct: 248 VETACGLFQGLA-KKDVISWNTLIGG-HTHMNLYKEALLLFQEMLRSGESPNDVTMLSVL 305
Query: 462 YA-KH------GRWEDV---SRMRKLIRSKSM 483
A H GRW V R++ + + S+
Sbjct: 306 PACAHLGAIDIGRWIHVYINKRLKGVTNASSL 337
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 296/505 (58%), Gaps = 8/505 (1%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ + C NL+ +I Q+LK + +L +I + S G+ A +F + +
Sbjct: 160 LFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRD 219
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +N++I Y A+ +Y+QM+ + + PD+ T+ V+ +CA L LG
Sbjct: 220 LVSWNSLINGYVRRRQPREAMGIYQQMITEH-----VKPDEVTMIGVVSACAQLESLKLG 274
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
++IH ++ + GL NAL+D+Y KC +L +F+ M + +V+W +I GYA+
Sbjct: 275 REIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKN 334
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A LF MP +V+W AMI EAL++FR+MQ ++PD+++++ L
Sbjct: 335 GLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCL 394
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+QLG+L+ G W H Y K++L + ALI+MY KCG + +A Q+F++M R+ +
Sbjct: 395 SACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSL 454
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+ +IGGLA +G + AI F +M + P++ITF+G+L+AC H G EG YFD M
Sbjct: 455 TWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQM 514
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
K ++ + +HY C+V+LLGRAG L++A +I+ MPM+ DA +WG+L +C + NL I
Sbjct: 515 KSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLI 574
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A LL L+P D+G YVLL+N+Y + G+WE+ +RK++ + ++KTPG S IEVN
Sbjct: 575 GERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNG 634
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELL 521
+ EF+ D + P + I+ L+
Sbjct: 635 IINEFIVRDKSHPQSEQIYECFNLI 659
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 226/466 (48%), Gaps = 70/466 (15%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFK 70
L + + +L++C++ +LK+I Q++ L F +++I C + +L Y +
Sbjct: 52 LSNPLLSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILN 111
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ PNVF +NA+IR + + LYK+ML R G PD +T F+ K CA L
Sbjct: 112 NLQNPNVFSWNAVIRGCVESENPQKGLVLYKRML--TRAGCR--PDNYTYSFLFKVCANL 167
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
+ +G +I V K G N ++ + E AHKVF+E RD+V+WN+LI
Sbjct: 168 VLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLI 227
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+GY R Q + EA+ +++QM ++PDE+
Sbjct: 228 NGYVRRRQPR-------------------------------EAMGIYQQMITEHVKPDEV 256
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+++ V+ ACAQL SL+LG IH Y +++ L + + NAL++MY+KCG + LFD M
Sbjct: 257 TMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNM 316
Query: 311 VERDVVSWSTVIGGLANHG-------------------------------KAHKAIHLFH 339
++ VVSW+T+I G A +G + +A+ LF
Sbjct: 317 RKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFR 376
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
EMQ + P+ +T + LSAC+ G + G+ + +K+ H++ + L+D+ +
Sbjct: 377 EMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKK-HNLSLDVALGTALIDMYAKC 435
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
G + +AL + EMP + ++ W +++ Y N+ A+ ++
Sbjct: 436 GNMTKALQVFNEMPRR-NSLTWTAIIGGLALYGNVNDAIFYFSKMI 480
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/498 (35%), Positives = 289/498 (58%), Gaps = 10/498 (2%)
Query: 18 VPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
VP+ S N+ + T + + + +S M+ + G + A LF+ + +
Sbjct: 199 VPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPD 258
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
++ +NAMI Y N L A+ L+ +ML + S + PD+FT+ V+ +CA L
Sbjct: 259 RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHE----SSMAPDEFTITSVLSACANLGNVR 314
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM--TDRDIVAWNNLISG 192
+GKQ+HA++ + + +S NAL+ Y K + A ++ ++ TD +++++ L+ G
Sbjct: 315 IGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG 374
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y ++G M+ AR +F M +V+WTAMI GY G EA+D+FR M G EP+ ++
Sbjct: 375 YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTL 434
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+VL CA L L+ G+ IH ++ L + + + NA+I MY + G A ++FDQ+
Sbjct: 435 AAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCW 494
Query: 313 R-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
R + ++W+++I LA HG+ +A+ LF EM R V P+ IT++G+LSAC+H GF NEG
Sbjct: 495 RKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKR 554
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
Y+D +K +H I ++ HY C+VDLL RAG +A I MP++PDA WGSLLS+CR +
Sbjct: 555 YYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH 614
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N E+A +A E LL ++P ++G Y ++N+Y+ GRW D +R+ K + K+++K G S
Sbjct: 615 KNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSW 674
Query: 492 IEVNNEVQEFVSGDDTKP 509
+ +++ F + D P
Sbjct: 675 THIRSKIHVFGADDVVHP 692
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 224/503 (44%), Gaps = 69/503 (13%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI----DVCNSGGDLAYASLLFKQ 71
R + + Q+ N + IH + +K L S +L ++ + G L A LF +
Sbjct: 31 RLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDE 90
Query: 72 V--KEPNVFLYNAMIRAYTNNHLYGLAINLYKQML---------------RDPRTGSLI- 113
+ NVF +N+++ + + A ++ +M R R G I
Sbjct: 91 IPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIK 150
Query: 114 ----------LPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
P +FTL V+ SCA ++G+++H+ V K GL S N++L++YG
Sbjct: 151 TLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYG 210
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
KC + A VFE M R + +WN ++S LG+M A LF+ MP +IVSW AMI+G
Sbjct: 211 KCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAG 270
Query: 224 YTHIGSYAEALDVF-RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
Y G A+AL +F R + + PDE +I SVL ACA LG++ +G+ +H Y + +
Sbjct: 271 YNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY 330
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVE------------------------------ 312
+ + NALI Y K G + A ++ DQ +E
Sbjct: 331 NSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGV 390
Query: 313 ---RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
RDVV+W+ +I G +G+ +AI LF M PN T +LS CA + G
Sbjct: 391 MNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYG 450
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
R +E ++ + R+G A + +++ + + W S++ +
Sbjct: 451 KQIHCRAIRS-LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALA 509
Query: 430 TYSNLEIAVIAMEHLLV--LEPE 450
+ E AV E +L +EP+
Sbjct: 510 QHGQGEEAVGLFEEMLRAGVEPD 532
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/498 (35%), Positives = 289/498 (58%), Gaps = 10/498 (2%)
Query: 18 VPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
VP+ S N+ + T + + + +S M+ + G + A LF+ + +
Sbjct: 93 VPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPD 152
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
++ +NAMI Y N L A+ L+ +ML + S + PD+FT+ V+ +CA L
Sbjct: 153 RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHE----SSMAPDEFTITSVLSACANLGNVR 208
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM--TDRDIVAWNNLISG 192
+GKQ+HA++ + + +S NAL+ Y K + A ++ ++ TD +++++ L+ G
Sbjct: 209 IGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEG 268
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y ++G M+ AR +F M +V+WTAMI GY G EA+D+FR M G EP+ ++
Sbjct: 269 YVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTL 328
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+VL CA L L+ G+ IH ++ L + + + NA+I MY + G A ++FDQ+
Sbjct: 329 AAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCW 388
Query: 313 R-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
R + ++W+++I LA HG+ +A+ LF EM R V P+ IT++G+LSAC+H GF NEG
Sbjct: 389 RKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKR 448
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
Y+D +K +H I ++ HY C+VDLL RAG +A I MP++PDA WGSLLS+CR +
Sbjct: 449 YYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH 508
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N E+A +A E LL ++P ++G Y ++N+Y+ GRW D +R+ K + K+++K G S
Sbjct: 509 KNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSW 568
Query: 492 IEVNNEVQEFVSGDDTKP 509
+ +++ F + D P
Sbjct: 569 THIRSKIHVFGADDVVHP 586
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 199/427 (46%), Gaps = 42/427 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G LA A +F ++ E + + M+ +G AI M D T P +FT
Sbjct: 6 GRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT-----PTQFT 60
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L V+ SCA ++G+++H+ V K GL S N++L++YGKC + A VFE M
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF-R 238
R + +WN ++S LG+M A LF+ MP +IVSW AMI+GY G A+AL +F R
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+ + PDE +I SVL ACA LG++ +G+ +H Y + + + + NALI Y K G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 299 CINQASQLFDQMVE---------------------------------RDVVSWSTVIGGL 325
+ A ++ DQ +E RDVV+W+ +I G
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
+G+ +AI LF M PN T +LS CA + G R +E
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS-LLEQS 359
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
++ + R+G A + +++ + + W S++ + + E AV E +L
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419
Query: 446 V--LEPE 450
+EP+
Sbjct: 420 RAGVEPD 426
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 39/309 (12%)
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+A+ G++ AR +F +MP VSWT M+ G G + EA+ M G P + ++
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC--------------- 297
+VL +CA + +G +H + K L + N+++ MY KC
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 298 ----------------GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
G ++ A LF+ M +R +VSW+ +I G +G KA+ LF M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 342 -QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
+ P++ T +LSACA+ G G + R + + + L+ ++G
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRT-EMAYNSQVTNALISTYAKSG 240
Query: 401 RLDQALNIIEEMPMKPDAKI--WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLL 458
++ A I+++ M+ D + + +LL ++E A E V+ D + +
Sbjct: 241 SVENARRIMDQ-SMETDLNVISFTALLEGYVKIGDME---SAREMFGVMNNRDVVAWTAM 296
Query: 459 SNIYAKHGR 467
Y ++GR
Sbjct: 297 IVGYEQNGR 305
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
M+ K G + A +F +M ERD VSW+ ++ GL G+ +AI +M P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC------LVDLLGRAGRLDQAL 406
+LS+CA T G ++ H K+ C ++++ G+ G + A
Sbjct: 61 LTNVLSSCAVTQAGAVG-------RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETAT 113
Query: 407 NIIEEMPMKPDAKIWGSLLS 426
+ E MP++ + W +++S
Sbjct: 114 TVFERMPVRSVSS-WNAMVS 132
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 295/505 (58%), Gaps = 19/505 (3%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ +L++C+N ++ IH +I++ Q F+V ++I VC++ + YA +F+ V PN
Sbjct: 32 LISLLRNCKNNAQVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSIDYAYDVFRYVSNPN 91
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V+LY AMI + ++ ++LY +M+ S +LPD + + V+K+C C
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIH-----SSVLPDNYVITSVLKACGLDEC---- 142
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
++IH+ V K G S L+++YGK EL +A KVF+EM DRD V +I+ Y+
Sbjct: 143 REIHSQVLKLGFGSSRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQVVATVMINCYSEC 202
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G +K+A LF + V WTAMI G +AL++FR+MQ+ V L
Sbjct: 203 GCIKEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQLS---------VFYL 253
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
PA + G +H + + + + NALI MY +CG IN A ++F M ++DV+
Sbjct: 254 PARIWV-RWSSGAGVHSFVENQKMELSNFVGNALINMYSRCGDINVAKRVFKGMRDKDVI 312
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
S++T+I GLA HG + +AI++F +M PN +T + LL+AC+H G + GL F+SM
Sbjct: 313 SYNTMISGLAMHGASVEAINVFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 372
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
R +E +IEHYGC+VDLLGR GRL++A IE M ++PD + G+LLS+C+ + N+E+
Sbjct: 373 WRVFSVEPQIEHYGCIVDLLGRVGRLEEAYRFIENMLIEPDHIMLGALLSACKIHGNMEL 432
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ L E D+G YVLLS+IYA G+W++ + +R+ +R ++K PGCS IEV+N
Sbjct: 433 GEKIAKRLFESENPDSGTYVLLSHIYASSGKWKESTEIRESMRESGIEKEPGCSTIEVDN 492
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELL 521
++ EF GD P + I+ L+ L
Sbjct: 493 QIHEFHVGDIAHPRKEAIYQRLQEL 517
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 272/453 (60%), Gaps = 7/453 (1%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G + A LF+ + ++ +NAMI Y N L A+ L+ +ML + S + PD+FT
Sbjct: 244 GRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHE----SSMAPDEFT 299
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM- 178
+ V+ +CA L +GKQ+HA++ + + +S NAL+ Y K + A ++ ++
Sbjct: 300 ITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSM 359
Query: 179 -TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
TD +++++ L+ GY ++G M+ AR +F M +V+WTAMI GY G EA+D+F
Sbjct: 360 ETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLF 419
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
R M G EP+ ++ +VL CA L L+ G+ IH ++ L R + + NA+I MY +
Sbjct: 420 RSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARS 479
Query: 298 GCINQASQLFDQMVER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
G A ++FDQ+ R + ++W+++I LA HG+ +A+ LF EM R V P+ IT++G+
Sbjct: 480 GSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGV 539
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
LSAC+H GF NEG Y+D +K +H I ++ HY C+VDLL RAG +A I MP++P
Sbjct: 540 LSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEP 599
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
DA WGSLLS+CR + N E+A +A E LL ++P ++G Y ++N+Y+ GRW D +R+ K
Sbjct: 600 DAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWK 659
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
+ K+++K G S + +++ F + D P
Sbjct: 660 ARKEKAVRKETGFSWTHIRSKIHVFGADDVVHP 692
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 224/503 (44%), Gaps = 69/503 (13%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI----DVCNSGGDLAYASLLFKQ 71
R + + Q+ N + IH + +K L S +L ++ + G L A LF +
Sbjct: 31 RLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDE 90
Query: 72 V--KEPNVFLYNAMIRAYTNNHLYGLAINLYKQML---------------RDPRTGSLI- 113
+ NVF +N+++ + + A ++ +M R R G I
Sbjct: 91 IPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIK 150
Query: 114 ----------LPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
P +FTL V+ SCA ++G+++H+ V K GL S N++L++YG
Sbjct: 151 TLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYG 210
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
KC + A VFE M R + +WN ++S LG+M A LF+ MP +IVSW AMI+G
Sbjct: 211 KCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAG 270
Query: 224 YTHIGSYAEALDVF-RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
Y G A+AL +F R + + PDE +I SVL ACA LG++ +G+ +H Y + +
Sbjct: 271 YNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY 330
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVE------------------------------ 312
+ + NALI Y K G + A ++ DQ +E
Sbjct: 331 NSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGV 390
Query: 313 ---RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
RDVV+W+ +I G +G+ +AI LF M PN T +LS CA + G
Sbjct: 391 MNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYG 450
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
R +E ++ + R+G A + +++ + + W S++ +
Sbjct: 451 KQIHCRAIRS-LLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALA 509
Query: 430 TYSNLEIAVIAMEHLLV--LEPE 450
+ E AV E +L +EP+
Sbjct: 510 QHGQGEEAVGLFEEMLRAGVEPD 532
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 189/506 (37%), Positives = 282/506 (55%), Gaps = 10/506 (1%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
V +LQ C N E+++IH Q + L +++D S + YA L+F ++ P+V
Sbjct: 29 VILLQMCHNFQEVRQIHAQFIVSGLLARPPNAGRLLDSYVSMSQIYYALLVFNRIPSPDV 88
Query: 78 FLYNAMIRAYT-NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
F YNAMIR T N Y +L + + PD +T FV+K C+ L G
Sbjct: 89 FAYNAMIRGLTLGNCPYD------SLLLYNKLLLGGLTPDNYTYTFVLKVCSHLKAIFEG 142
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
KQ+H V K G+ + +L+ +Y K D L A V E + +++A N++ISGY
Sbjct: 143 KQVHCQVIKAGVAPDTHIHTSLIHMYAKSDCLACAEGVLAECSQENVLAINSMISGYMSQ 202
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV---GIEPDEISIV 253
G ++KAR +FDKM +W+ MI+GYT G + EAL +FR+M MV G++P+E ++V
Sbjct: 203 GHVEKARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALV 262
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S L A A LG+L+ G WIH Y + + L++MY KCG I+ + +LF +M +R
Sbjct: 263 SSLSATACLGALDQGRWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYKLFREMQQR 322
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DVV+W ++ G A HG+A K LF EM PN++ F+ +LSAC+H G+ G YF
Sbjct: 323 DVVTWGVMMSGFAMHGQARKCFQLFDEMVAGGTRPNEVIFVAILSACSHAGYLELGHHYF 382
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ M D I +EHYGC+VDLLGRAG+L +A +I MP +P A IWG+LLS+CR + +
Sbjct: 383 NQMVTDFGIRPSVEHYGCMVDLLGRAGQLAEAEELIISMPEEPTAVIWGALLSACRIHKD 442
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L A L+ LEP Y L +++ G E+ + + I+ ++ T G S IE
Sbjct: 443 LRRGRRAFRQLMQLEPLRGDRYKLAGQMFSSAGEKEEADNVTRFIKENELETTRGSSFIE 502
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
+N V EFV GD ++++ + E
Sbjct: 503 INGVVHEFVVGDADHHKAREMYRMWE 528
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 294/509 (57%), Gaps = 39/509 (7%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C L++L+ KIHT ++K F+ T ++ + G L A +F +
Sbjct: 115 FPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIP 174
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ NV + A+I Y + AI++++++L + PD FT+ V+ +C L
Sbjct: 175 DKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMN-----LAPDSFTIVRVLSACTQLGDL 229
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ G+ IH + + G+ + +L+D+Y
Sbjct: 230 NSGEWIHKCIMEMGMVRNVFVGTSLVDMY------------------------------- 258
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G M+KAR +FD MP IVSW AMI GY G EA+D+F QMQ ++PD ++V
Sbjct: 259 AKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVV 318
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
VL ACA+LG+LELGEW+ D+N L V+ ALI++Y KCG +++A ++F M E+
Sbjct: 319 GVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEK 378
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D V W+ +I GLA +G + LF ++++L + P+ TFIGLL C H G +EG YF
Sbjct: 379 DRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYF 438
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM R + IEHYGC+VDLLGRAG LD+A +I MPM+ +A +WG+LL +CR + +
Sbjct: 439 NSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRD 498
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
++A +A++ L+ LEP ++GNYVLLSNIY+ + +W++ +++R + K ++K PGCS IE
Sbjct: 499 TQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIE 558
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
V+ V EF+ GD P + I+ L+ L
Sbjct: 559 VDGIVHEFLVGDKYHPLSEKIYAKLDELT 587
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/446 (32%), Positives = 225/446 (50%), Gaps = 46/446 (10%)
Query: 7 ALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS 66
L IK+L ILQ + LK +H +L++ L N+L+ ++ D Y
Sbjct: 13 GLEIKKL------ILQGFNSFKHLKHLHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTR 66
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
LF Q+K+PN+FL+N MIR +N + AI Y M + LP+ FT PFV+K+
Sbjct: 67 FLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEG-----FLPNNFTFPFVLKA 121
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
CA LL LG +IH V K G + +L+ LY KC
Sbjct: 122 CARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKC--------------------- 160
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
G ++ A +FD +P +VSWTA+ISGY +G + EA+D+FR++ + +
Sbjct: 161 ----------GYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLA 210
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD +IV VL AC QLG L GEWIH + ++R + +L++MY KCG + +A +
Sbjct: 211 PDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSV 270
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
FD M E+D+VSW +I G A +G +AI LF +MQR V P+ T +G+LSACA G
Sbjct: 271 FDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGAL 330
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
G + R+ + + + L+DL + G + +A + + M K D +W +++S
Sbjct: 331 ELGEWVSGLVDRNEFLYNPVLGTA-LIDLYAKCGSMSRAWEVFKGMKEK-DRVVWNAIIS 388
Query: 427 --SCRTYSNLEIAVIAMEHLLVLEPE 450
+ Y + + L ++P+
Sbjct: 389 GLAMNGYVKISFGLFGQVEKLGIKPD 414
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/452 (39%), Positives = 275/452 (60%), Gaps = 15/452 (3%)
Query: 78 FLYNAMIRAYTNN---HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
F++N +IRA +N I++Y +M + PD T PF++ S +
Sbjct: 24 FVWNIIIRAIVHNVSPPQRHSPISVYFRMRHH-----CVSPDFHTFPFLLPSFHNPIHLP 78
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
LG++ HA + FGL +LL++Y C +L A ++F+E +D+ AWN++++ YA
Sbjct: 79 LGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYA 138
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-----VGIEPDE 249
+ G + AR LFD+MP ++SW+ +I+GY G Y EALD+FR+MQ+ V + P++
Sbjct: 139 KAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNK 198
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++ +VL AC +LG+LE G+W+H Y DK + V+ ALI+MY KCG + +A ++FD
Sbjct: 199 FTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDA 258
Query: 310 M-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWN 367
+ ++DV ++S +I LA +G + +F EM + PN +TF+G+L AC H G N
Sbjct: 259 LGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLIN 318
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+G YF M + I I+HYGC+VDL GR+G + +A + I MPM+PD IWGSLLS
Sbjct: 319 KGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 378
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
R +++ A++ L+ L+P ++G YVLLSN+YAK GRW +V R+R + K +KK P
Sbjct: 379 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVP 438
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
GCS +EV V EFV GD+++ + I+ +LE
Sbjct: 439 GCSYVEVEGVVHEFVVGDESQQESERIYAMLE 470
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 161/389 (41%), Gaps = 68/389 (17%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA---------- 63
F +L S N I L ++ H QIL + L + F+ T ++++ +S GDL+
Sbjct: 64 FPFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESV 123
Query: 64 ---------------------YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102
+A LF ++ E NV ++ +I Y Y A++L+++
Sbjct: 124 SKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 183
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M + P+KFT+ V+ +C L GK +H+++ K+G++ + AL+D+Y
Sbjct: 184 MQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMY 243
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
KC L A +VF+ LG K + +++AMI
Sbjct: 244 AKCGSLERAKRVFDA------------------LGSKKDVK------------AYSAMIC 273
Query: 223 GYTHIGSYAEALDVFRQMQMV-GIEPDEISIVSVLPACAQLGSLELGE-WIHMYCDKNHL 280
G E VF +M I P+ ++ V +L AC G + G+ + M ++ +
Sbjct: 274 CLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGI 333
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFH 339
++++Y + G I +A M +E DV+ W +++ G G
Sbjct: 334 TPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALK 393
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ L P N ++ L + A TG W E
Sbjct: 394 RLIELD-PMNSGAYVLLSNVYAKTGRWIE 421
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 15/237 (6%)
Query: 20 ILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV-KEP 75
+L +C L L++ +H+ I KY + L T +ID+ G L A +F + +
Sbjct: 204 VLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKK 263
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+V Y+AMI +YGL + Q+ + T + I P+ T ++ +C +
Sbjct: 264 DVKAYSAMICCLA---MYGLTDECF-QVFSEMTTSNNINPNSVTFVGILGACVHRGLINK 319
Query: 136 GKQIHAHVC-KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLISGY 193
GK + +FG+ ++DLYG+ + EA M + D++ W +L+SG
Sbjct: 320 GKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 379
Query: 194 ARLGQMKKA----RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
LG +K + L + P + ++ + + Y G + E + +M++ GI+
Sbjct: 380 RMLGDIKTCEGALKRLIELDPMNS-GAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIK 435
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/509 (36%), Positives = 296/509 (58%), Gaps = 45/509 (8%)
Query: 20 ILQSCENLIEL--------KKIHTQILKYLLSQSNFLVTK--MIDVCNSGGDLAYASLLF 69
IL+ C +L++L K+IH +++ + N K + + + +++A+ +F
Sbjct: 33 ILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIF 92
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
Q++ PN+F +N MIR + + A+ L+ QM S ILPD T PF+ K+ A
Sbjct: 93 NQIQAPNIFTWNTMIRGFAESENPSPAVELFSQM----HAASSILPDTHTFPFLFKAVAK 148
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L+ SLG+ IH+ V + G S +N+L+ +Y
Sbjct: 149 LMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMY--------------------------- 181
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+ LG + A +F+ M Y V+W ++I+G+ G EAL ++R+M G+EPD
Sbjct: 182 ----SVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDG 237
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++VS+L AC +LG+L LGE +HMY K L++ NAL+++Y KCG A ++FD+
Sbjct: 238 FTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDE 297
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M ER VVSW+++I GLA +G ++A+ LF E++R + P++ITF+G+L AC+H G +EG
Sbjct: 298 MEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG 357
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF MK ++ I +IEH+GC+VDLL RAG++ A + I MP+ P+A IW +LL +C
Sbjct: 358 FNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACT 417
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ +LE+ +A + LE +G++VLLSN+YA RW DV +RK++ K +KKTPG
Sbjct: 418 IHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGY 477
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
SL+E+ N V EF+ GD + P ++ + +L
Sbjct: 478 SLVELKNRVYEFIMGDRSHPQSEETYAML 506
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/527 (37%), Positives = 297/527 (56%), Gaps = 15/527 (2%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L +C L +LK +IH I K S F+ + +ID + G + A +F ++
Sbjct: 159 FGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGME 218
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E NV +N +I Y N G AI + R G PD+ TL V+ +CA L
Sbjct: 219 EKNVVSWNCLITCYEQN---GPAIEALEAFGRMTELG--FKPDEVTLASVVSACATLAAF 273
Query: 134 SLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
G QIHA V K ++ I NAL+D+Y KC + EA VF+ M R+ V+ ++SG
Sbjct: 274 KEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSG 333
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA+ +K AR +F + IVSW A+I+GYT G EAL +FR ++ + P +
Sbjct: 334 YAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTF 393
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRT------VICNALIEMYIKCGCINQASQL 306
++L A A L LELG H + K+ ++ + N+LI+MY+KCG + + ++
Sbjct: 394 GNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRV 453
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F+ MVE+D VSW+T+I G A +G +A+ LF +M P+ +T IG L AC+H G
Sbjct: 454 FENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLV 513
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
EG YF SM ++H + +HY C+VDLLGRAG L++A ++IE MP +PDA +W SLLS
Sbjct: 514 EEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLS 573
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+C+ + N+ + E + ++P +G YVLL+N+Y++ GRW D +RKL+R + + K
Sbjct: 574 ACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQ 633
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
PGCS I++ + V F+ D P K+I+ +L+LL H +A V D
Sbjct: 634 PGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPD 680
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 191/389 (49%), Gaps = 4/389 (1%)
Query: 98 NLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENA 157
L KQ++ G + D ++ C L + +H + + +N
Sbjct: 5 GLVKQIIGSAGGGGIFFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNR 64
Query: 158 LLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
L+D+YGKC L A KVF+ M++R++ ++N++IS R G + ++ LF MP SW
Sbjct: 65 LIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSW 124
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
+MI+G+ + EALD F +M ++ S S L AC++L L+LG IH K
Sbjct: 125 NSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISK 184
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + + LI+ Y KCG + A ++FD M E++VVSW+ +I +G A +A+
Sbjct: 185 SKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEA 244
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F M L P+++T ++SACA + EG+ + + + + LVD+
Sbjct: 245 FGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYA 304
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
+ GR+++A + + MP++ +A +++S Y+ A ++ +D ++
Sbjct: 305 KCGRVNEARCVFDRMPVR-NAVSETTMVSG---YAKSASVKAARSMFATIKQKDIVSWNA 360
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
L Y ++G E+ + ++++ +S+ T
Sbjct: 361 LIAGYTQNGENEEALGLFRMLKRESVCPT 389
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/459 (38%), Positives = 277/459 (60%), Gaps = 11/459 (2%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+PN+ +N MI + ++ LY A+ ++ M LR PD T+ V+ + L
Sbjct: 212 QPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRG------FEPDGTTISSVLPAVGDLED 265
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+G IH +V K GL S +AL+D+YGKC E +VF++M D+ + N I G
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325
Query: 193 YARLGQMKKARMLF----DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+R GQ++ + LF D+ +VSWT+MI+ + G EAL++FR+MQ+ G++P+
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPN 385
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++I +LPAC + +L G+ H + + + + +ALI+MY KCG I + FD
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ +++V W+ VI G A HGKA +A+ +F MQR P+ I+F +LSAC+ +G E
Sbjct: 446 GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G YF+SM + IE ++EHY C+V LL RAG+L+QA +I MP+ PDA +WG+LLSSC
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R ++N+ + +A E L LEP + GNY+LLSNIYA G W +V+R+R ++++K ++K PG
Sbjct: 566 RVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
CS IEV N+V ++GD + P + I L+ L++ +
Sbjct: 626 CSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKK 664
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 221/430 (51%), Gaps = 47/430 (10%)
Query: 26 NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
+L + ++ H ILK L L TK++ + A A+L+ V EPNVF ++ +I
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIY 87
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
A++ H + A++ + QML ++PD LP +K+CAGL +Q+H
Sbjct: 88 AFSKFHQFHHALSTFSQMLTRG-----LMPDNRVLPSAVKACAGLSALKPARQVHGIASV 142
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
G S S +++L+ +Y KC+++ +AH+VF+ M + D+V+W+ L++ YAR G + +A+ L
Sbjct: 143 SGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRL 202
Query: 206 FDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
F +M + + +SW MI+G+ H G Y+EA+ +F M + G EPD +I SVLPA
Sbjct: 203 FSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGD 262
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM----------- 310
L L +G IH Y K L+ + +ALI+MY KC C ++ SQ+FDQM
Sbjct: 263 LEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAF 322
Query: 311 ------------------------VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
+E +VVSW+++I + +G+ +A+ LF EMQ V
Sbjct: 323 IFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGV 382
Query: 347 PPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
PN +T LL AC + G + S++R I + L+D+ + GR+ +
Sbjct: 383 KPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG--ISTDVYVGSALIDMYAKCGRIQAS 440
Query: 406 LNIIEEMPMK 415
+ +P K
Sbjct: 441 RICFDGIPTK 450
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 295/528 (55%), Gaps = 13/528 (2%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDV---CNSGGDLAYASLLFK 70
FV +L SC E L ++IH+ I + L + +I + CNS + A +F
Sbjct: 261 FVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNS---VQEAREIFD 317
Query: 71 QVKEPNVFLYNAMIRAYTNN-HLYGLAINLYKQML-RDPRTGSLILPDKFTLPFVIKSCA 128
++ + +V ++AMI Y + + +I+ Q+L R R G + P+K T ++++C
Sbjct: 318 RMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREG--VFPNKVTFMSILRACT 375
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
G+QIHA + K G + + A+ ++Y KC + EA +VF +M ++++VAW +
Sbjct: 376 AHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTS 435
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+S Y + G + A +F +MP +VSW MI+GY G + ++ M+ G +PD
Sbjct: 436 FLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPD 495
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++++++L AC L LE G+ +H K L TV+ +LI MY KCG + +A +FD
Sbjct: 496 RVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFD 555
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M RD V+W+ ++ G HG +A+ LF M + +V PN+IT ++SAC+ G E
Sbjct: 556 KMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQE 615
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G F M+ D + + +HYGC+VDLLGRAGRL +A I+ MP +PD +W +LL +C
Sbjct: 616 GREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGAC 675
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
++++N+++A A H+L LEP Y+ LSNIYA+ GRW+D +++R+++ + +KK G
Sbjct: 676 KSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRG 735
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
S IE++ + FV+ D P + I LE L A D+ +
Sbjct: 736 ESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRF 783
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 238/508 (46%), Gaps = 73/508 (14%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+ IL++C N L + +KIHT + + + T +I + + G+++ A +F ++
Sbjct: 160 FLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMT 219
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E NV + A+I+A + A LY+QML+ + I P+ T ++ SC
Sbjct: 220 ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQ-----AGISPNAVTFVSLLNSCNTPEAL 274
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ G++IH+H+ + GL++ I NAL+ +Y KC+ + EA ++F+ M+ RD+++W+ +I+GY
Sbjct: 275 NRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGY 334
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ SGY S E + +M+ G+ P++++ +
Sbjct: 335 AQ--------------------------SGYKDKESIDEVFQLLERMRREGVFPNKVTFM 368
Query: 254 SVLPACAQLGSLELGEWIH--------------------MYCDKNHLL-----------R 282
S+L AC G+LE G IH MY + +
Sbjct: 369 SILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANK 428
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
V + + MYIKCG ++ A ++F +M R+VVSW+ +I G A +G K L M+
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488
Query: 343 RLKVPPNDITFIGLLSAC-AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
P+ +T I +L AC A G L++ +++K +E L+ + + G+
Sbjct: 489 AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLG--LESDTVVATSLIGMYSKCGQ 546
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
+ +A + ++M + D W ++L+ + + AV + + L+ + N + L+ +
Sbjct: 547 VAEARTVFDKMSNR-DTVAWNAMLAGYGQHGDGLEAVDLFKRM--LKERVSPNEITLTAV 603
Query: 462 YAKHGRWEDVSRMRKLIR--SKSMKKTP 487
+ R V R++ R + K TP
Sbjct: 604 ISACSRAGLVQEGREIFRMMQEDFKMTP 631
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 187/402 (46%), Gaps = 45/402 (11%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
K +H Q+ + + +L +I+ + D+A A +F+++ +V +++MI AY N
Sbjct: 76 KMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGN 135
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ A + +++M T + I P++ T ++K+C G++IH V G+++
Sbjct: 136 NHPAKAFDTFERM-----TDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMET 190
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
AL+ +Y KC G++ A +F KM
Sbjct: 191 DVAVATALITMYSKC-------------------------------GEISVACEVFHKMT 219
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+VSWTA+I EA +++ QM GI P+ ++ VS+L +C +L G
Sbjct: 220 ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRR 279
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
IH + + L ++ NALI MY KC + +A ++FD+M +RDV+SWS +I G A G
Sbjct: 280 IHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGY 339
Query: 331 AHK-----AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL-MYFDSMKRDHHIEH 384
K L M+R V PN +TF+ +L AC G +G ++ + K ++
Sbjct: 340 KDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDR 399
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
++ + ++ + G + +A + +M K + W S LS
Sbjct: 400 SLQ--TAIFNMYAKCGSIYEAEQVFSKMANK-NVVAWTSFLS 438
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 147/314 (46%), Gaps = 33/314 (10%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
+L + T VI+ CA GK +H + + G++ N+L++ Y K +++ A
Sbjct: 52 LLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAE 111
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
+VF MT RD+V W+++I+ YA G H A+
Sbjct: 112 QVFRRMTLRDVVTWSSMIAAYA----------------------------GNNHP---AK 140
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
A D F +M IEP+ I+ +S+L AC LE G IH + + ALI
Sbjct: 141 AFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALIT 200
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
MY KCG I+ A ++F +M ER+VVSW+ +I A H K ++A L+ +M + + PN +T
Sbjct: 201 MYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVT 260
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
F+ LL++C N G S + +E + L+ + + + +A I + M
Sbjct: 261 FVSLLNSCNTPEALNRG-RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRM 319
Query: 413 PMKPDAKIWGSLLS 426
K D W ++++
Sbjct: 320 S-KRDVISWSAMIA 332
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 2/218 (0%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
G EA+ + ++ G+ + + V+ CA+ E G+ +H D+ + +
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
N+LI Y K + A Q+F +M RDVV+WS++I A + KA F M +
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
PN ITF+ +L AC + +G ++ + +E + L+ + + G + A
Sbjct: 155 PNRITFLSILKACNNYSILEKG-RKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+ +M + + W +++ + + L A E +L
Sbjct: 214 VFHKMTER-NVVSWTAIIQANAQHRKLNEAFELYEQML 250
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/486 (36%), Positives = 285/486 (58%), Gaps = 38/486 (7%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G + A LF ++ +V +NAMI Y Y A+ L+K+M++
Sbjct: 204 TALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMK---- 259
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ I PD+ T+ V+ +CA LG+Q+H+ + G S+ N+L+DLY KC
Sbjct: 260 -TNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKC---- 314
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LF+ + Y ++SW +I GYTH+
Sbjct: 315 ---------------------------GELETACGLFEGLLYKDVISWNTLIGGYTHMNL 347
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVIC 287
Y EAL +F++M G P++++++S+LPACA LG++++G WIH+Y DK + +
Sbjct: 348 YKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLR 407
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+LI+MY KCG I A Q+F+ ++ + + SW+ +I G A HG+A A +F M+++ +
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIE 467
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+DITF+GLLSAC+ +G + G F +M +D+ I K+EHYGC++DLLG +G +A
Sbjct: 468 PDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I M M+PD IW SLL +C+ N+E+ ++L+ +EPE+ G YVLLSNIYA GR
Sbjct: 528 MINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGR 587
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
W +V+++R L+ K MKK PGCS IE+++ V EF+ GD P ++I+ +LE + + ++
Sbjct: 588 WNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Query: 528 AKDVID 533
A V D
Sbjct: 648 AGFVPD 653
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/449 (33%), Positives = 249/449 (55%), Gaps = 18/449 (4%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPN 76
+L +C+ L L+ IH Q++K L +N+ ++K++++C L YA +F+ ++EPN
Sbjct: 39 LLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPN 98
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCPSL 135
+ ++N M R + + A+ LY M+ SL +LP+ +T PF++KSCA
Sbjct: 99 LLIWNTMFRGHALSSDPVSALKLYVCMI------SLGLLPNSYTFPFLLKSCAKSKAFKE 152
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+QIH HV K G +L+ +Y + L +A KVF+ RD+V++ LI GYA
Sbjct: 153 GQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYAS 212
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G ++ A+ LFD++P +VSW AMISGY G+Y EAL++F++M I PDE ++V+V
Sbjct: 213 RGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTV 272
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ ACAQ GS+ELG +H + D + I N+L+++Y KCG + A LF+ ++ +DV
Sbjct: 273 VSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDV 332
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MY 372
+SW+T+IGG + +A+ LF EM R PND+T + +L ACAH G + G +Y
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
D KR + L+D+ + G ++ A + + K + W +++ +
Sbjct: 393 ID--KRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAMIFGFAMHG 449
Query: 433 NLEIA--VIAMEHLLVLEPEDTGNYVLLS 459
+ A + + + +EP+D LLS
Sbjct: 450 RADAAFDIFSRMRKIGIEPDDITFVGLLS 478
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/498 (36%), Positives = 302/498 (60%), Gaps = 12/498 (2%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+IE +K+H +K L +++ ++ + + G + +F ++ E +V +N +I +
Sbjct: 46 VIEGEKVHGYAVKTGLESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISS 105
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHV-CK 145
Y + + AI+++++M R+ S + D+ T+ + +C+ L +G++I+ +V +
Sbjct: 106 YVGHGRFEDAISVFQRMSRE----SNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTE 161
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
F + T NAL+D++ KC L +A +F+ M D+++ W +++SGY G+ +AR L
Sbjct: 162 FEMSVR--TGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEAREL 219
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
F++ P +V WTAM++GY + EAL++FR MQ I PD +VS+L CAQ G+L
Sbjct: 220 FERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGAL 279
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
E G+WIH Y +N + V+ AL++MY KCGCI A +F +M ERD SW+++I GL
Sbjct: 280 EQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGL 339
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A +G + +A+ L++EM+ + V +DITF+ +L+AC+H GF EG F SM H I+ K
Sbjct: 340 ATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPK 399
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK---IWGSLLSSCRTYSNLEIAVIAME 442
EHY CL+DLL RAG LD+A +I++M + D ++ SLLS+ R Y N++IA E
Sbjct: 400 SEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAARNYGNVKIAERVAE 459
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
L +E D+ + LL+++YA RWEDV+ +R+ ++ ++K PGCS IEV+ EF+
Sbjct: 460 KLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEVDGVSHEFI 519
Query: 503 SGDD--TKPFLKDIFWLL 518
G+D + P + +I +L
Sbjct: 520 VGNDPSSHPKMDEINSML 537
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 166/348 (47%), Gaps = 66/348 (18%)
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
G + PD FTLP V+KS L G+++H + K GL+S S N+L+ +Y ++
Sbjct: 23 GQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLMGMYAALGKME 82
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
HKVF+EM +RD+V+WN LIS Y G+ + A +F +M +
Sbjct: 83 ITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRES---------------- 126
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY-CDKNHLLRRTVICN 288
++ DE +IVS L AC+ L +LE+GE I+ Y + + RT N
Sbjct: 127 --------------NLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTEFEMSVRT--GN 170
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA----------------- 331
AL++M+ KCGC+++A +FD M +++V W++++ G ++G+
Sbjct: 171 ALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVL 230
Query: 332 --------------HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
+A+ LF MQ ++ P++ + LL+ CA TG +G ++
Sbjct: 231 WTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIR 290
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ K+ LVD+ + G ++ AL + EM + D W SL+
Sbjct: 291 ENRVTVDKVVGTA-LVDMYAKCGCIETALGVFYEMKER-DTASWTSLI 336
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
M+ S+ + L +F +++ G+ PD ++ VL + +L + GE +H Y K
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
L + +CN+L+ MY G + ++FD+M ERDVVSW+ +I HG+ AI +F
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 340 EMQR-LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
M R + ++ T + LSAC+ G + + + E + LVD+ +
Sbjct: 121 RMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTE--FEMSVRTGNALVDMFCK 178
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLS 426
G LD+A I + M K + K W S++S
Sbjct: 179 CGCLDKARAIFDSMRDK-NVKCWTSMVS 205
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/483 (38%), Positives = 287/483 (59%), Gaps = 38/483 (7%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVK 73
RF + C ++ +LK+IH Q++ N+ ++++ C + GDL+YA LF +
Sbjct: 28 RFSLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQ 87
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
EPN F++N +IRA+ ++ A+ LY M R ++P K T PF++K+C+
Sbjct: 88 EPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLD-----VIPGKHTFPFLLKACSNFQSL 142
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
Q+H HV KFGL + N L+ Y ++ A +VF+E+++R + W +ISGY
Sbjct: 143 QSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGY 202
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ Y + EAL++F QM + G+EP+ ++
Sbjct: 203 AQ--------------NYCS-----------------NEALELFDQMIVEGLEPNGATLA 231
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL ACAQ G L+LGE IH++ ++ + ++ AL+ MY K G I A +LFD + ER
Sbjct: 232 SVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDTISER 291
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+ +W+ +I GLA HG A +A+ F ++++ ++ PNDITF+G+LSAC H G + G F
Sbjct: 292 NTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIF 351
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
MKR + IE KIEHYGC+VDLLGR G L +A +I+ M K D I G+LL SC+ + N
Sbjct: 352 HLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLGSCKNHGN 411
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+EIA ++ +LVLEP + G YV+LSN+YA+ GRWEDV R+RK+++S ++KKTPG SL++
Sbjct: 412 IEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLVD 471
Query: 494 VNN 496
+N
Sbjct: 472 SDN 474
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/459 (38%), Positives = 277/459 (60%), Gaps = 11/459 (2%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+PN+ +N MI + ++ LY A+ ++ M LR PD T+ V+ + L
Sbjct: 212 QPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRG------FEPDGTTISSVLPAVGDLED 265
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+G IH +V K GL S +AL+D+YGKC E +VF++M D+ + N I G
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325
Query: 193 YARLGQMKKARMLF----DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+R GQ++ + LF D+ +VSWT+MI+ + G EAL++FR+MQ+ G++P+
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPN 385
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++I +LPAC + +L G+ H + + + + +ALI+MY KCG I + FD
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ +++V W+ VI G A HGKA +A+ +F MQR P+ I+F +LSAC+ +G E
Sbjct: 446 GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G YF+SM + IE ++EHY C+V LL RAG+L+QA +I MP+ PDA +WG+LLSSC
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R ++N+ + +A E L LEP + GNY+LLSNIYA G W +V+R+R ++++K ++K PG
Sbjct: 566 RVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
CS IEV N+V ++GD + P + I L+ L++ +
Sbjct: 626 CSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKK 664
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 221/430 (51%), Gaps = 47/430 (10%)
Query: 26 NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
+L + ++ H ILK L L TK++ + A A+L+ V EPNVF ++ +I
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIY 87
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
A++ H + A++ + QML ++PD LP +K+CAGL +Q+H
Sbjct: 88 AFSKFHQFHHALSTFSQMLTRG-----LMPDNRVLPSAVKACAGLSALKPARQVHGIASV 142
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
G S S +++L+ +Y KC+++ +AH+VF+ M + D+V+W+ L++ YAR G + +A+ L
Sbjct: 143 SGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRL 202
Query: 206 FDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
F +M + + +SW MI+G+ H G Y+EA+ +F M + G EPD +I SVLPA
Sbjct: 203 FSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGD 262
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM----------- 310
L L +G IH Y K L+ + +ALI+MY KC C ++ SQ+FDQM
Sbjct: 263 LEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAF 322
Query: 311 ------------------------VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
+E +VVSW+++I + +G+ +A+ LF EMQ V
Sbjct: 323 IFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGV 382
Query: 347 PPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
PN +T LL AC + G + S++R I + L+D+ + GR+ +
Sbjct: 383 KPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG--ISTDVYVGSALIDMYAKCGRIQAS 440
Query: 406 LNIIEEMPMK 415
+ +P K
Sbjct: 441 RICFDGIPTK 450
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 262/412 (63%), Gaps = 4/412 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELIEA 171
+ P+ TL ++ CA C G +H + CK GL ++ + A+L +Y K +A
Sbjct: 60 VEPNHITLIALLSGCAD--CEPFGDSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKA 117
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
VF+ + D++ V WN +I GY R G++ A +FD+MP ++SWTAMI+G+ G +
Sbjct: 118 RLVFDRVEDKNSVTWNTMIDGYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHE 177
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL FR+MQ+ G++PD +++++ L ACA LG+L G W+H + + N+LI
Sbjct: 178 EALAWFREMQVSGVKPDYVAVIAALAACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLI 237
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
++Y +CGC+ A Q+FD+M +R VVSW++VI G A +G AH+++ F MQ + P+ +
Sbjct: 238 DLYCRCGCVEFARQVFDEMEKRTVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAV 297
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
TF G L+AC+H G EG+ YF++MKRD+ I +IEHYGCLVDL RAGRL++AL ++E
Sbjct: 298 TFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEEALKVVES 357
Query: 412 MPMKPDAKIWGSLLSSCRTYSN-LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
MPMKP+ + GSLL++CRT+ N E+A M+ L L+ + NYV+LSN+YA G+WE
Sbjct: 358 MPMKPNEVVIGSLLAACRTHGNDTELAERMMKRLSELKVKGHSNYVILSNMYAADGQWEG 417
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
S+MR+ ++ +KK PG S IE+++ F++GD I +LEL++
Sbjct: 418 ASKMRRKMKGLGLKKQPGFSSIEIDDRTHVFMAGDSAHVENGYIREVLELIS 469
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 148/341 (43%), Gaps = 76/341 (22%)
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
T VSWT+ I+ + G AEA F M++ G+EP+ I+++++L CA G+ +H
Sbjct: 28 TTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEP--FGDSLH 85
Query: 273 MYC-----DKNHLL---------------------------RRTVICNALIEMYIKCGCI 300
Y D+N ++ + +V N +I+ Y++ G +
Sbjct: 86 GYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMRSGRV 145
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+ A+++FD+M ERD++SW+ +I G G +A+ F EMQ V P+ + I L+AC
Sbjct: 146 DDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAALAAC 205
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP------- 413
A+ G + GL + ++ + L+DL R G ++ A + +EM
Sbjct: 206 ANLGALSFGL-WVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKRTVVSW 264
Query: 414 ---------------------------MKPDAKIWGSLLSSCRTYSNLEIAVI---AMEH 443
KPDA + L++C +E V AM+
Sbjct: 265 NSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKR 324
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+ P +Y L ++Y++ GR E+ K++ S MK
Sbjct: 325 DYRISPR-IEHYGCLVDLYSRAGRLEEAL---KVVESMPMK 361
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 40/318 (12%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MID G + A+ +F ++ E ++ + AMI + L+ A+ +++M S
Sbjct: 135 MIDGYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREM-----QVS 189
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
+ PD + + +CA L S G +H V K++ N+L+DLY +C + A
Sbjct: 190 GVKPDYVAVIAALAACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFA 249
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
+VF+EM R +V+WN++I G+A +G+ H
Sbjct: 250 RQVFDEMEKRTVVSWNSVIVGFA--------------------------ANGHAH----- 278
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVICNAL 290
E+L FR+MQ +PD ++ L AC+ +G +E G +++ + R L
Sbjct: 279 ESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCL 338
Query: 291 IEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHK-AIHLFHEMQRLKVPP 348
+++Y + G + +A ++ + M ++ + V +++ HG + A + + LKV
Sbjct: 339 VDLYSRAGRLEEALKVVESMPMKPNEVVIGSLLAACRTHGNDTELAERMMKRLSELKVKG 398
Query: 349 NDITFIGLLSACAHTGFW 366
+ ++ L + A G W
Sbjct: 399 HS-NYVILSNMYAADGQW 415
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 30/151 (19%)
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
Q +Q VSW++ I L+ +G+ +A F M+ V PN IT I LLS CA
Sbjct: 19 QKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCE 78
Query: 365 FWNEGL----------------------MYFD--SMKRDHHIEHKIEH-----YGCLVDL 395
+ + L MY ++ + ++E + ++D
Sbjct: 79 PFGDSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDG 138
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
R+GR+D A + +EMP + D W ++++
Sbjct: 139 YMRSGRVDDAAKVFDEMPER-DLISWTAMIN 168
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/471 (38%), Positives = 291/471 (61%), Gaps = 10/471 (2%)
Query: 28 IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
+E +K+H +K + + ++++ G + +A +F ++ + + L+N M+R Y
Sbjct: 63 VEGRKVHAAAVKTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCY 122
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG 147
+ A+ L ++M R T PD+ TL + +C+ SLG++I A++ G
Sbjct: 123 IRCGRFTAAVALAEEMERSGAT-----PDRVTLVTAVTACSRAGDLSLGRRIRAYM--DG 175
Query: 148 LKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
+ S+ NALLD+Y K L EA K+F++M +R+I++W L+SGYA GQ+ KARMLF
Sbjct: 176 VFGFSLPVANALLDMYTKNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLF 235
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
+ ++ WTAMI+ GS+ EAL +FR MQ+ +EPD+ ++V++L CA +G+L+
Sbjct: 236 YQCTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIGALD 295
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
GEWIH Y + ++ V+ ALIEMY KCG ++++ Q+F +M RD +W+ +I GLA
Sbjct: 296 QGEWIHQYAEGRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLA 355
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+G+A KA+ LF EMQR K P+ ITFIG+L+AC H G +EG +F +MK + IE +I
Sbjct: 356 TNGQASKALELFEEMQRSKTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRI 415
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA-KIWGSLLSSCRTYSNLEIAVIAMEHLL 445
EHY CLV+LLG AG L +A +I +MP+ D ++G+LL++C+ Y N+E++ + +
Sbjct: 416 EHYSCLVNLLGHAGLLYEAEKLIRDMPVNNDTMPLFGALLTACKAYGNVEMSERLTKRIA 475
Query: 446 VLE-PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ ++ VL+SN+YA RWE+ R+R + ++KKT GCS+IEV
Sbjct: 476 KEDCSQNPDVNVLMSNVYATASRWEESIRVRSKMTHPAVKKTAGCSMIEVK 526
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 175/396 (44%), Gaps = 72/396 (18%)
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N +IR + + +Y D R L+ D +T PFV+++ + G+++H
Sbjct: 15 NVLIRTLARRGSFARVMAVYY----DLRARGLV-ADSYTYPFVLRAIGVMKLSVEGRKVH 69
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
A K G + + T ++LL++Y + A KVF+EM R +V WN ++ Y R G+
Sbjct: 70 AAAVKTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRCGR-- 127
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
+ A+ + +M+ G PD +++V+ + AC+
Sbjct: 128 -----------------------------FTAAVALAEEMERSGATPDRVTLVTAVTACS 158
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
+ G L LG I Y D V NAL++MY K G + +A ++F QM ER+++SW+
Sbjct: 159 RAGDLSLGRRIRAYMDGVFGFSLPV-ANALLDMYTKNGYLEEAVKMFQQMPERNIISWTI 217
Query: 321 VIGGLA-------------------------------NHGKAHKAIHLFHEMQRLKVPPN 349
++ G A HG +A+ LF +MQ +V P+
Sbjct: 218 LVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVEPD 277
Query: 350 DITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
T + LL+ CA+ G ++G ++ + R+ I+ + L+++ + G +D++L I
Sbjct: 278 KFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGT--ALIEMYSKCGHVDKSLQI 335
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
M + DA W +++ T A+ E +
Sbjct: 336 FGRMQGR-DAAAWTAIICGLATNGQASKALELFEEM 370
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/503 (35%), Positives = 284/503 (56%), Gaps = 45/503 (8%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
+ L ++ H ++K ++ F+ +ID + L+ A +F ++ +V +N
Sbjct: 141 AAAGLTPVRGAHAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNT 200
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+ A A +++ +M P+K T
Sbjct: 201 AMAAMVRQGEVDAARSMFDEM-----------PEKDT----------------------- 226
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
++ N +LD Y K E +A ++F+ M R++V+W+ ++S Y + G M+ A
Sbjct: 227 ----------VSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMA 276
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R++FDKMP +V+WT M+S G EA +F +M IE D I++VS+L ACA+
Sbjct: 277 RVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAES 336
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD-QMVERDVVSWSTV 321
GSL LG+ IH + + L R T++CNAL++M+ KCGC+N+A +FD ++VE+D+VSW+ +
Sbjct: 337 GSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNII 396
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
IGG A HG KA+ LF +M++ P+ +T I +LSAC H G EG +F +M+ D+
Sbjct: 397 IGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYG 456
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
I+ +IEHYGC+VDLLGR G + +A+++I+ MP +P+ IWGSLLS+CR + N+E A +A+
Sbjct: 457 IKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAV 516
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
L L+P GNY +LSNIYA+ G+W D+++ R ++ +KT G S IE+N EF
Sbjct: 517 NELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEF 576
Query: 502 VSGDDTKPFLKDIFWLLELLALH 524
GD P I +++ L+ H
Sbjct: 577 TVGDRKHPESDQISDMIDRLSSH 599
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 254/412 (61%), Gaps = 4/412 (0%)
Query: 115 PDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELIEA 171
P+ T ++ C S LG +H + CK GL ++H + A++ +Y K +A
Sbjct: 69 PNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKA 128
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
VF+ M D++ V WN +I GY R GQ+ A +FDKMP ++SWTAMI+G+ G
Sbjct: 129 RLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQE 188
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL FR+MQ+ G++PD ++I++ L AC LG+L G W+H Y + N+LI
Sbjct: 189 EALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLI 248
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
++Y +CGC+ A Q+F M +R VVSW++VI G A +G AH+++ F +MQ P+ +
Sbjct: 249 DLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAV 308
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
TF G L+AC+H G EGL YF MK D+ I +IEHYGCLVDL RAGRL+ AL +++
Sbjct: 309 TFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQS 368
Query: 412 MPMKPDAKIWGSLLSSCRTY-SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
MPMKP+ + GSLL++C + +N+ +A M+HL L + NYV+LSN+YA G+WE
Sbjct: 369 MPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEG 428
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
S+MR+ ++ +KK PG S IE+++ + F++GD+ I +LEL++
Sbjct: 429 ASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELIS 480
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 151/345 (43%), Gaps = 80/345 (23%)
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL--GSLELGEW 270
T VSWT+ I+ T G AEA F M + G+EP+ I+ +++L C GS LG+
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 271 IHMYC-----DKNHLL---------------------------RRTVICNALIEMYIKCG 298
+H Y D+NH++ + +V N +I+ Y++ G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
++ A+++FD+M ERD++SW+ +I G G +A+ F EMQ V P+ + I L+
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI---------- 408
AC + G + GL + ++ + L+DL R G ++ A +
Sbjct: 215 ACTNLGALSFGL-WVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 409 ------------------------IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
++E KPDA + L++C S++ + + +
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC---SHVGLVEEGLRYF 330
Query: 445 LVLEPE-----DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+++ + +Y L ++Y++ GR ED KL++S MK
Sbjct: 331 QIMKCDYRISPRIEHYGCLVDLYSRAGRLEDA---LKLVQSMPMK 372
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 40/296 (13%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ Y+ +++ MID G + A+ +F ++ E ++ + AMI + A
Sbjct: 131 VFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEA 190
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + + +C L S G +H +V K++ N
Sbjct: 191 LLWFREM-----QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN 245
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
+L+DLY +C + A +VF M R +V+WN++I G+A G ++ + F KM
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM------- 298
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG--EWIHMY 274
Q G +PD ++ L AC+ +G +E G + M
Sbjct: 299 ------------------------QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHG 329
CD + R L+++Y + G + A +L M ++ + V +++ +NHG
Sbjct: 335 CDY-RISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 44/165 (26%)
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
N Q +Q VSW++ I L +G+ +A F +M V PN ITFI LLS C
Sbjct: 22 NPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC 81
Query: 361 --------------------------------------AHTGFWNEGLMYFDSMKRDHHI 382
+ G + + + FD M+ + +
Sbjct: 82 GDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV 141
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+ ++D R+G++D A + ++MP + D W ++++
Sbjct: 142 T-----WNTMIDGYMRSGQVDNAAKMFDKMPER-DLISWTAMING 180
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 285/470 (60%), Gaps = 8/470 (1%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
E +KIH ++K L ++ ++D+ G + + +F+++ E + +N MI Y
Sbjct: 126 EGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYV 185
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
+ A+++Y++M + P++ T+ + +CA L LGK+IH ++ L
Sbjct: 186 RCKRFEEAVDVYRRMQMESNEK----PNEATVVSTLSACAVLRNLELGKEIHDYIAN-EL 240
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
I NALLD+Y KC + A ++F+ M +++ W ++++GY GQ+ +AR LF++
Sbjct: 241 DLTPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFER 300
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
P +V WTAMI+GY + +A+ +F +MQ+ G+EPD+ +V++L CAQLG+LE G
Sbjct: 301 SPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQG 360
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+WIH Y D+N + V+ ALIEMY KCGCI ++ ++F+ + + D SW+++I GLA +
Sbjct: 361 KWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMN 420
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
GK +A+ LF MQ + P+DITF+ +LSAC H G EG F SM +HIE +EH
Sbjct: 421 GKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEH 480
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPD---AKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
YGC +DLLGRAG L +A +++++P + + ++G+LLS+CRTY N+++ L
Sbjct: 481 YGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALA 540
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
++ D+ + LL++IYA RWEDV ++R ++ +KK PG S IEV+
Sbjct: 541 KVKSSDSSLHTLLASIYASADRWEDVRKVRSKMKDLGIKKVPGYSAIEVD 590
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/508 (29%), Positives = 239/508 (47%), Gaps = 79/508 (15%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLL 68
K L+ ++ +L+SC+++ +LK+I I + L Q ++ K++ +S GD YA+ +
Sbjct: 5 KLLKGTYISLLKSCKSMSQLKQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRI 64
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F + P++F+YN MI+A+ AI+L++Q LR+ + PD +T P+V+K
Sbjct: 65 FNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQ-LRERG----VWPDNYTYPYVLKGIG 119
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
+ G++IHA V K GL+ N+L+D+Y + + +VFEEM +RD V+WN
Sbjct: 120 CIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNI 179
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-P 247
+ISGY R + + EA+DV+R+MQM E P
Sbjct: 180 MISGYVRCKR-------------------------------FEEAVDVYRRMQMESNEKP 208
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+E ++VS L ACA L +LELG+ IH Y N L ++ NAL++MY KCGC++ A ++F
Sbjct: 209 NEATVVSTLSACAVLRNLELGKEIHDYI-ANELDLTPIMGNALLDMYCKCGCVSVAREIF 267
Query: 308 DQMV-------------------------------ERDVVSWSTVIGGLANHGKAHKAIH 336
D M+ RDVV W+ +I G AI
Sbjct: 268 DAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIA 327
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF EMQ V P+ + LL+ CA G +G + + ++ I+ L+++
Sbjct: 328 LFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQG-KWIHNYIDENRIKMDAVVSTALIEMY 386
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPEDTGN 454
+ G ++++L I + D W S++ A+ E + L+P+D
Sbjct: 387 AKCGCIEKSLEIFNGLK-DMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITF 445
Query: 455 YVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
+LS G V RKL S S
Sbjct: 446 VAVLSAC----GHAGLVEEGRKLFHSMS 469
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/414 (40%), Positives = 254/414 (61%), Gaps = 4/414 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELI 169
I P+ T ++ +C S L +H + CK GL +SH + A+L +Y K +
Sbjct: 64 IEPNHITFISLLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVR 123
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A VF+ M D++ V WN +I GY R GQ+ A +FD+MP ++SWTAMI+G+ G
Sbjct: 124 KARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGF 183
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EAL FR+MQ+ G+ PD ++I++ L AC LG+L G W H Y + N+
Sbjct: 184 HEEALAWFREMQISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNS 243
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI++Y +CGC+ A Q+FD M +R VVSW++VI G A +G A++++ F +MQ P+
Sbjct: 244 LIDLYCRCGCVEFARQVFDTMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPD 303
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G L+AC+H G EG YF MK D+ I +IEH+GCLVDL RAGRL+ A+ ++
Sbjct: 304 AVTFTGALTACSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVV 363
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEI-AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
E MPMKP+ + GSLL++CR + N I A M+H+ L+ + NYV+LSN+YA G+W
Sbjct: 364 ESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKHISDLDVKGHSNYVILSNMYAADGKW 423
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
E S+MR+ ++ +KK PG S IE+++ F++GD+ I +LE+++
Sbjct: 424 EGASKMRRKMKGLGLKKQPGYSSIEIDDYTHVFMAGDNAHVETAYIREVLEVIS 477
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 36/247 (14%)
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL--GSLELGEW 270
TIVSWT+ I+ + AEA F M++ GIEP+ I+ +S+L AC GS L +
Sbjct: 32 TIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSACGNFPSGSEALSDL 91
Query: 271 IHMYC-----DKNHLL---------------------------RRTVICNALIEMYIKCG 298
+H Y D++H++ + +V N +I+ Y++ G
Sbjct: 92 LHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMRNG 151
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
++ A ++FD+M ERD++SW+ +I G G +A+ F EMQ V P+ + I L+
Sbjct: 152 QVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALA 211
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC + G + GL + + + L+DL R G ++ A + + M K
Sbjct: 212 ACTNLGALSFGL-WAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTME-KRTV 269
Query: 419 KIWGSLL 425
W S++
Sbjct: 270 VSWNSVI 276
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 128/295 (43%), Gaps = 38/295 (12%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ Y+ +++ MID G + A +F ++ E ++ + AMI + + A
Sbjct: 128 VFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEA 187
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + + +C L S G H +V +++ N
Sbjct: 188 LAWFREM-----QISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSN 242
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
+L+DLY +C + A +VF+ M R +V+WN++I G+A G ++ + F
Sbjct: 243 SLIDLYCRCGCVEFARQVFDTMEKRTVVSWNSVIVGFAANGNANESLVYF---------- 292
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYC 275
R+MQ G +PD ++ L AC+ +G +E G ++ M
Sbjct: 293 ---------------------RKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQYFQMMK 331
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHG 329
+ R L+++Y + G + A ++ + M ++ + V +++ NHG
Sbjct: 332 TDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVIGSLLAACRNHG 386
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 44/165 (26%)
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+N Q +Q +VSW++ I L+ + +A F +M+ + PN ITFI LLSA
Sbjct: 18 VNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSA 77
Query: 360 CAHTGFWNEGL--------------------------MY------------FDSMKRDHH 381
C + +E L MY FD M+ +
Sbjct: 78 CGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNS 137
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + ++D R G++D A+ + +EMP + D W ++++
Sbjct: 138 VT-----WNTMIDGYMRNGQVDNAVKVFDEMPER-DLISWTAMIT 176
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 182/459 (39%), Positives = 274/459 (59%), Gaps = 11/459 (2%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFT 119
DLA A F+Q+ E ++ +N+MI Y N Y L A++++ +MLRD S++ PD+FT
Sbjct: 229 DLAMAQ--FEQMAERDIVTWNSMISGY-NQRGYDLRALDMFSKMLRD----SMLSPDRFT 281
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L V+ +CA L +G+QIH+H+ G I NAL+ +Y +C + A ++ E+
Sbjct: 282 LASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 180 DRD--IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
+D I + L+ GY +LG M +A+ +FD + +V+WTAMI GY G Y EA+++F
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLF 401
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
R M P+ ++ ++L + L SL G+ IH K+ + + NALI MY K
Sbjct: 402 RSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
G I AS+ FD + ERD VSW+++I LA HG A +A+ LF M + P+ IT++G+
Sbjct: 462 GSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
SAC H G N+G YFD MK I + HY C+VDL GRAG L +A IE+MP++P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
D WGSLLS+CR Y N+++ +A E LL+LEPE++G Y L+N+Y+ G+WE+ +++RK
Sbjct: 582 DVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
++ +KK G S IEV ++V F D P +I+
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIY 680
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 202/427 (47%), Gaps = 42/427 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+ + F ++ + + + MI Y N Y AI + +M+R+ I P +FT
Sbjct: 94 GDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREG-----IEPSQFT 148
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L V+ S A C GK++H+ + K GL+ + N+LL++Y KC + + A VF+ M
Sbjct: 149 LTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMV 208
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+DI +WN +I+ + ++GQM A F++M IV+W +MISGY G ALD+F +
Sbjct: 209 VKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSK 268
Query: 240 M-QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
M + + PD ++ SVL ACA L L +GE IH + ++ NALI MY +CG
Sbjct: 269 MLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 299 CI---------------------------------NQASQLFDQMVERDVVSWSTVIGGL 325
+ N+A +FD + +RDVV+W+ +I G
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGY 388
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
HG +AI+LF M + PN T +LS + G S + I +
Sbjct: 389 EQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEI-YS 447
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+ L+ + +AG + A + + + D W S++ + + + E A+ E +L
Sbjct: 448 VSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 446 V--LEPE 450
+ L P+
Sbjct: 508 MEGLRPD 514
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 160/352 (45%), Gaps = 50/352 (14%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQ--------IHAHVCKFGLKSHSITENALLDLYGKCD 166
P +L +++ C LL S+ K +H V K GL N L+++Y K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ A K+F+EM R +WN ++S YA+ G M + FD++P VSWT MI GY +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
IG Y +A+ + +M GIEP + ++ +VL + A LE G+ +H + K L +
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSV 183
Query: 287 CNALIEMYIKCGCINQASQLFD-------------------------------QMVERDV 315
N+L+ MY KCG A +FD QM ERD+
Sbjct: 184 SNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V+W+++I G G +A+ +F +M R + P+ T +LSACA N +
Sbjct: 244 VTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACA-----NLEKLCIG 298
Query: 375 SMKRDHHIEHKIEHYG----CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
H + + G L+ + R G ++ A +IE+ K D KI G
Sbjct: 299 EQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK-DLKIEG 349
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/503 (35%), Positives = 284/503 (56%), Gaps = 45/503 (8%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
+ L ++ H ++K ++ F+ +ID + L+ A +F ++ +V +N
Sbjct: 213 AAAGLTPVRGAHAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNT 272
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+ A A +++ +M P+K T
Sbjct: 273 AMAAMVRQGEVDAARSMFDEM-----------PEKDT----------------------- 298
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
++ N +LD Y K E +A ++F+ M R++V+W+ ++S Y + G M+ A
Sbjct: 299 ----------VSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMA 348
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R++FDKMP +V+WT M+S G EA +F +M IE D I++VS+L ACA+
Sbjct: 349 RVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAES 408
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD-QMVERDVVSWSTV 321
GSL LG+ IH + + L R T++CNAL++M+ KCGC+N+A +FD ++VE+D+VSW+ +
Sbjct: 409 GSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNII 468
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
IGG A HG KA+ LF +M++ P+ +T I +LSAC H G EG +F +M+ D+
Sbjct: 469 IGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYG 528
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
I+ +IEHYGC+VDLLGR G + +A+++I+ MP +P+ IWGSLLS+CR + N+E A +A+
Sbjct: 529 IKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAV 588
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
L L+P GNY +LSNIYA+ G+W D+++ R ++ +KT G S IE+N EF
Sbjct: 589 NELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEF 648
Query: 502 VSGDDTKPFLKDIFWLLELLALH 524
GD P I +++ L+ H
Sbjct: 649 TVGDRKHPESDQISDMIDRLSSH 671
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 276/468 (58%), Gaps = 38/468 (8%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G + A +F ++ +V +NAMI Y Y A+ L+K M++
Sbjct: 161 TALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK---- 216
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ V+ +CA LG+Q+H+ + G S+ NAL+DLY KC
Sbjct: 217 -TNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKC---- 271
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LF+ +PY ++SW +I GYTH+
Sbjct: 272 ---------------------------GELETACGLFEGLPYKDVISWNTLIGGYTHMNL 304
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVIC 287
Y EAL +F++M G P++++++S+LPACA LG++++G WIH+Y DK + + +
Sbjct: 305 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLR 364
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+LI+MY KCG I A Q+F+ ++ + + SW+ +I G A HG+A + +F M++ +
Sbjct: 365 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIE 424
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+DITF+GLLSAC+H+G + G F SM +D+ + K+EHYGC++DLLG +G +A
Sbjct: 425 PDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 484
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I M M+PD IW SLL +C+ + N+E+ ++L+ +EPE+ G+YVLLSNIYA GR
Sbjct: 485 MINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGR 544
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
W +V+ R L+ K MKK PGCS IE+++ V EF+ GD P ++I+
Sbjct: 545 WNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 592
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 224/393 (56%), Gaps = 15/393 (3%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPNVFLYNAM 83
L L+ IH Q++K L +N+ ++K+I+ C L YA +F+ ++EPN+ ++N M
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 84 IRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
R + + A+ LY M+ SL +LP+ +T PF++KSCA G+QIH H
Sbjct: 63 FRGHALSSDPVSALKLYVCMI------SLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGH 116
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V K G +L+ +Y + L +AHKVF+E RD+V++ LI GYA G ++ A
Sbjct: 117 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENA 176
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
+ +FD++P +VSW AMISGY G+Y EAL++F+ M + PDE ++V+V+ ACAQ
Sbjct: 177 QKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 236
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
GS+ELG +H + D + I NALI++Y KCG + A LF+ + +DV+SW+T+I
Sbjct: 237 GSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLI 296
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MYFDSMKRD 379
GG + +A+ LF EM R PND+T + +L ACAH G + G +Y D KR
Sbjct: 297 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID--KRL 354
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
+ + L+D+ + G ++ A + +
Sbjct: 355 KGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI 387
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/532 (36%), Positives = 299/532 (56%), Gaps = 54/532 (10%)
Query: 15 DRF--VPILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLF 69
DRF + IL +C L K+IH Q+++ L + T ++D+ G + YA LF
Sbjct: 226 DRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLF 285
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
Q+ + ++ +NAMI Y+ N + ++M + G + PD T+ ++ CA
Sbjct: 286 DQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKM----QEGGKLHPDWITMINLLPPCAQ 341
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L LGK +H + G H + E AL+D+YG+C
Sbjct: 342 LEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGEC------------------------ 377
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
G++K A LF +M ++SW AMI+ YT G +A+ +F+ + ++PD
Sbjct: 378 -------GKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDA 430
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+I S+LPA A+L SL E IH Y K L T + N+++ MY KCG + +A ++FD+
Sbjct: 431 TTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDR 490
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M +DV+SW+TVI A HG +I LF EM+ PN TF+ LL +C+ G NEG
Sbjct: 491 MTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEG 550
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF+SMKRD++I IEHYGC++DL+GR G LD A N IEEMP+ P A+IWGSLL++ R
Sbjct: 551 WEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASR 610
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
++E+A IA EH+L LE ++TG YVLLSN+YA+ GRWEDV R++ ++ + ++K+ GC
Sbjct: 611 NKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGC 670
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDIGE 541
S+++++++ FV+ D + + ++ DV+DI+ + IGE
Sbjct: 671 SVVDLSSKTFRFVNQDRSDNEINMVY--------------DVLDIISKKIGE 708
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 211/460 (45%), Gaps = 84/460 (18%)
Query: 40 YLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINL 99
+L+ +++ +T+ + G + A LF+ +++ + F++N MIR + +N L+ A++
Sbjct: 54 FLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDF 113
Query: 100 YKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALL 159
Y +M G D FT PFVIK+C GL + G+++H V K GL N+L+
Sbjct: 114 YHRMEFGGVRG-----DNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLI 168
Query: 160 DLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG---------------------- 197
+Y K + A VF EM RD+V+WN++ISGY +G
Sbjct: 169 IMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRF 228
Query: 198 -----------------------QMKKARMLFDKMPYTTIV------------------- 215
QM ++R+ D M T++V
Sbjct: 229 SVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQI 288
Query: 216 ------SWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSLELG 268
+W AMI GY+ E+ R+MQ G + PD I+++++LP CAQL ++ LG
Sbjct: 289 TDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLG 348
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+ +H + +N L V+ AL++MY +CG + A LF QM ER+++SW+ +I +
Sbjct: 349 KSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKN 408
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM---YFDSMKRDHHIEHK 385
G+ KA+ LF ++ + P+ T +L A A E Y +K D +
Sbjct: 409 GENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVS 468
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+V + G+ G L +A I + M K D W +++
Sbjct: 469 ----NSIVFMYGKCGNLLRAREIFDRMTFK-DVISWNTVI 503
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 294/505 (58%), Gaps = 39/505 (7%)
Query: 18 VPILQSCENLI-ELKKIHTQILKYLLSQSNFLVTK--MIDVCNSGGDLAYASLLFKQVKE 74
+ +LQ C + +LK+IH +++ +S +N + K + + + ++YA +F +
Sbjct: 21 ISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHN 80
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
PNVF +N +IR Y + A Y+QM+ S + PD T PF++K+ + L
Sbjct: 81 PNVFTWNTIIRGYAESDNPSPAFLFYRQMVV-----SCVEPDTHTYPFLLKAISKSLNVR 135
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+ IH+ + G +S +N+LL +Y C
Sbjct: 136 EGEAIHSVTIRNGFESLVFVQNSLLHIYAAC----------------------------- 166
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
G + A +F+ M +V+W +MI+G+ G EAL +FR+M + G+EPD ++VS
Sbjct: 167 --GDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVS 224
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
+L A A+LG+LELG +H+Y K L + + + N+L+++Y KCG I +A ++F +M ER+
Sbjct: 225 LLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERN 284
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VSW+++I GLA +G +A+ LF EM+ + P++ITF+G+L AC+H G +EG YF
Sbjct: 285 AVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFR 344
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
MK + I +IEHYGC+VDLL RAG + QA I+ MP++P+A IW +LL +C + +L
Sbjct: 345 RMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHL 404
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
+ IA HLL LEP+ +G+YVLLSN+YA RW DV +R+ + +KKTPG SL+E+
Sbjct: 405 GLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVEL 464
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLE 519
N V EF GD + P +D++ LLE
Sbjct: 465 GNRVYEFTMGDRSHPQSQDVYALLE 489
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 293/497 (58%), Gaps = 9/497 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ L +C L L K++H Q+++ L ++ + ++++ G A +F +
Sbjct: 273 YTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLH 332
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ N + +I + + + ++ L+ QM L+ D+F L +I C +
Sbjct: 333 DRNNVAWTVLIAGFLQHGCFTESVELFNQM-----RAELMTLDQFALATLISGCCSRMDL 387
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+Q+H+ K G + N+L+ +Y KCD L A +F M ++DIV+W ++I+ +
Sbjct: 388 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAH 447
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISI 252
+++G + KAR FD M +++W AM+ Y G+ + L ++ M + PD ++
Sbjct: 448 SQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTY 507
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V++ CA LG+ +LG+ I K L+ T + NA+I MY KCG I +A ++FD +
Sbjct: 508 VTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNV 567
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+D+VSW+ +I G + HG +AI +F ++ + P+ I+++ +LS C+H+G EG Y
Sbjct: 568 KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSY 627
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
FD MKR H+I +EH+ C+VDLLGRAG L +A ++I+EMPMKP A++WG+LLS+C+ +
Sbjct: 628 FDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHG 687
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N E+A +A +H+ L+ D+G+Y+L++ IYA G+ +D +++RKL+R K +KK PG S +
Sbjct: 688 NNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWM 747
Query: 493 EVNNEVQEFVSGDDTKP 509
EVNN+V F + D + P
Sbjct: 748 EVNNKVHVFKADDVSHP 764
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 196/422 (46%), Gaps = 9/422 (2%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L+ A LF ++ +V +N ++ Y + Y ++ + M R + P+ FT
Sbjct: 85 GRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSS----PNAFT 140
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ +KSC L SL Q+ V KFG + S AL+D++ +C + A ++F +
Sbjct: 141 FAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIK 200
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+ I N+++ GY + + A LFD MP +VSW M+S + G EALD+
Sbjct: 201 EPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
MQ G+ D + S L ACA+L SL G+ +H +N + +AL+E+Y KCGC
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGC 320
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+A +F+ + +R+ V+W+ +I G HG +++ LF++M+ + + L+S
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C G + I+ + L+ + + L A +I M K D
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAESIFRFMNEK-DIV 438
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
W S++++ N+ A E + ++ + + Y +HG ED RM ++
Sbjct: 439 SWTSMITAHSQVGNI---AKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVML 495
Query: 480 SK 481
S+
Sbjct: 496 SE 497
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 33/272 (12%)
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF-EEMTDR 181
++SC + + +H + GL S +N LL Y C L +A ++ ++
Sbjct: 10 ALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHP 69
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+++ N +++GY +LG++ A LF +MP + SW ++SGY Y +L+ F M
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 242 MVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
G P+ + + +C LG L + K + + AL++M+++CG +
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTV 189
Query: 301 NQAS-------------------------------QLFDQMVERDVVSWSTVIGGLANHG 329
+ AS +LFD M ERDVVSW+ ++ L+ G
Sbjct: 190 DLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+ +A+ + +MQ V + T+ L+ACA
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 291/532 (54%), Gaps = 39/532 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
I++ C L+ ++K +Q+ +L+ + I C+S L A Q+++PNVF+
Sbjct: 786 IIKQCSTPKLLESALAAMIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFV 845
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
YNA+I+ + ++ Y +MLRD + P +T ++++ A G+ +
Sbjct: 846 YNALIKGFVTCSHPIRSLEFYVRMLRDS-----VSPSSYTYSSLVQASA--FASGFGESL 898
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW------------- 186
AH+ KFG H + L+ Y + EA KVF+EM +RD V W
Sbjct: 899 QAHIWKFGFGFHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDM 958
Query: 187 ------------------NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
N LI GY RLG ++ A LF++MP I+SWT MI+GY+
Sbjct: 959 DSANSLANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNK 1018
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
Y EA+ VF +M GI PDE+++ +V+ ACA LG LE+G+ +HMY +N + I +
Sbjct: 1019 RYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGS 1078
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY KCG + +A +F + ++++ W+++I GLA HG A +A+ +F +M+ V P
Sbjct: 1079 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 1138
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N +TF+ + +AC H G EG + SM D+ I +EHYGC+V L +AG + +AL +
Sbjct: 1139 NTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALEL 1198
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I M +P+A IWG+LL CR + NLEIA IA L++LEP ++G Y LL ++YA+ RW
Sbjct: 1199 IGSMEFEPNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYAEQNRW 1258
Query: 469 EDVSRMRKLIRSKSMKKT-PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
DV+ +R +R ++K PG S I ++ F + D + ++ LL+
Sbjct: 1259 RDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLD 1310
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 286/507 (56%), Gaps = 43/507 (8%)
Query: 18 VPILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---LAYASLLFKQ 71
VPIL E +L E+++ H +LK L F +K++ + + ++YA + +
Sbjct: 40 VPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNR 99
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ PN F +N++IRAY N+ +A+ ++++ML P + PDK++ FV+K+CA
Sbjct: 100 IGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP-----VFPDKYSFTFVLKACAAFC 154
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC---------------------DELI- 169
G+QIH K GL + EN L+++YG+ + L+
Sbjct: 155 GFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 214
Query: 170 ---------EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
EA +F+EM +R++ +WN +ISGYA G +K+A+ +FD MP +VSW AM
Sbjct: 215 AYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAM 274
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
++ Y H+G Y E L+VF +M E PD ++VSVL ACA LGSL GEW+H+Y DK+
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG 334
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
+ + AL++MY KCG I++A ++F +RDV +W+++I L+ HG A+ +F
Sbjct: 335 IEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFS 394
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
EM PN ITFIG+LSAC H G ++ F+ M + +E IEHYGC+VDLLGR
Sbjct: 395 EMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRM 454
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLS 459
G++++A ++ E+P + + SLL +C+ + LE A LL L D+ Y +S
Sbjct: 455 GKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMS 514
Query: 460 NIYAKHGRWEDVSRMRKLIRSKSMKKT 486
N+YA GRWE V R+ +R++ + ++
Sbjct: 515 NLYASDGRWEKVIDGRRNMRAERVNRS 541
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 179/474 (37%), Positives = 286/474 (60%), Gaps = 19/474 (4%)
Query: 65 ASLLFKQVK----EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
AS +FK+++ +PN + +++ ++ LY + L+K M RT + + + L
Sbjct: 217 ASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVM----RTRGIEIGAE-AL 271
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
V+ CA + GK+IH +V K G + + +NAL+ YGK + +AHKVF E+ +
Sbjct: 272 AVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKN 331
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYT----------TIVSWTAMISGYTHIGSY 230
+++V+WN LIS YA G +A F M + ++SW+A+ISG+ + G
Sbjct: 332 KNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRG 391
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
++L++FRQMQ+ + + ++I SVL CA+L +L LG +H Y +N + ++ N L
Sbjct: 392 EKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGL 451
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND 350
I MY+KCG + +FD + RD++SW+++IGG HG A+ F+EM R ++ P++
Sbjct: 452 INMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDN 511
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
ITF+ +LSAC+H G G FD M + IE +EHY C+VDLLGRAG L +A +I+
Sbjct: 512 ITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVR 571
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
MP++P+ +WG+LL+SCR Y +++I +L L+ + TG+++LLSNIYA +GRW+D
Sbjct: 572 NMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWDD 631
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
+R+R R+K +KK PG S IEV +V F +G+ L+DI+ +LE L LH
Sbjct: 632 SARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFGLEDIYVILEELNLH 685
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 220/498 (44%), Gaps = 86/498 (17%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
EL F Q C L + +++H+Q++ + FL ++I V L++A +F
Sbjct: 29 ELIYSFHAFFQRCFTLQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDA 88
Query: 72 VKEPNV---FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
+ ++ L+N++IRA ++ + A+ LY +M + LPD FTLP VI++C+
Sbjct: 89 IPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKLG-----FLPDGFTLPLVIRACS 143
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
L L + +H H + G ++H N L+ +YGK + +A ++F+ M R IV+WN
Sbjct: 144 SLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNT 203
Query: 189 LISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
++SGYA A +F +M + V+WT+++S + G Y E L++F+ M+ G
Sbjct: 204 MVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRG 263
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYC----------DKNHLL------------- 281
IE ++ VL CA + ++ G+ IH Y KN L+
Sbjct: 264 IEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAH 323
Query: 282 --------RRTVICNALIEMYIKCGCINQASQLFDQM----------VERDVVSWSTVIG 323
+ V NALI Y + G ++A F M V +V+SWS VI
Sbjct: 324 KVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVIS 383
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-------------- 369
G A G+ K++ LF +MQ KV N +T +LS CA N G
Sbjct: 384 GFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSD 443
Query: 370 -----------LMYFDSMKRDHHIEHKIE-----HYGCLVDLLGRAGRLDQALNIIEEM- 412
M K H + IE + L+ G G + AL EM
Sbjct: 444 NILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMI 503
Query: 413 --PMKPDAKIWGSLLSSC 428
MKPD + ++LS+C
Sbjct: 504 RARMKPDNITFVAILSAC 521
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 19 PILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
+L C L L +++H ++ ++S + + +I++ GD L+F ++
Sbjct: 415 SVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGR 474
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
++ +N++I Y + L A+ + +M+R + + PD T ++ +C+ +
Sbjct: 475 DLISWNSLIGGYGMHGLGENALRTFNEMIR-----ARMKPDNITFVAILSACSHAGLVAA 529
Query: 136 GKQIHAH-VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
G+ + V +F ++ + ++DL G+ L EA + M
Sbjct: 530 GRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNM 573
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 174/496 (35%), Positives = 293/496 (59%), Gaps = 6/496 (1%)
Query: 31 KKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+ IH LK + +S + ++ + L A +F ++ E +V + ++ Y
Sbjct: 162 EAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYAR 221
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
GLA ++ R G + P+ TL + + + + G +H +V + G+
Sbjct: 222 A---GLADEAWRLFCRMVVVGGM-RPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVA 277
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+NAL+D++GKC + A +VF+ M +D+ +W ++++ YA+ G ++ A LF M
Sbjct: 278 RSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDM 337
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P +VSW+ MI+ Y+ + EA+ +FR+M G++P + ++VSVL ACAQLG L+LG
Sbjct: 338 PRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGR 397
Query: 270 WIHM-YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
WI+ Y N + + NALI+M+ KCG + +AS+LFD+M ER+VVSW+T+I A H
Sbjct: 398 WIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVH 457
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G++ +AI LF +++ + P+ ITF+GLL++C+H+G +EG YF M+ + IE ++EH
Sbjct: 458 GQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEH 517
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
Y C++DLLG+ G L++A + MPM+ D WG+LL++CR + N+EI + L+ L+
Sbjct: 518 YACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELD 577
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
P D+G YVL+S IYA +W+ V +R +R + +KK PGCS IEV + +F+ D +
Sbjct: 578 PSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDFLVADVSH 637
Query: 509 PFLKDIFWLLELLALH 524
++I+ L+ + H
Sbjct: 638 ACSEEIYSALKNIYFH 653
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 203/467 (43%), Gaps = 79/467 (16%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPN 76
+L+SC + L ++H + L+ F ++++ C A++L + PN
Sbjct: 41 LLESCASFRRLLQLHALLTVTGLAAHRFPASRLLAFCALSTPPRLAHAAAILARASPGPN 100
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP-DKFTLPFVIKSCAGLL---- 131
++ M+R + L A+ L+++++RD LP D T F +K+ A
Sbjct: 101 AYMLGTMMRGFLRARLPARALGLFRRVVRDR------LPADARTFVFAVKAAAAAAESEH 154
Query: 132 --CPSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
PS G+ IH K G S+ NAL+ Y L +A KVF+EM +RD+V+W
Sbjct: 155 GGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTT 214
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L+ GYAR G +A LF +M ++ G G+ P+
Sbjct: 215 LVDGYARAGLADEAWRLFCRM----------VVVG--------------------GMRPN 244
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN------- 301
+++V+ + A Q+G L G +H Y + + R + NAL++M+ KCGC+
Sbjct: 245 AVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFD 304
Query: 302 ------------------------QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
A QLF M R+VVSWS +I + + +A+ L
Sbjct: 305 GMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWL 364
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F EM V P D T + +LSACA G + G +++ + I + L+D+
Sbjct: 365 FREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFA 424
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ G + +A + +EM + + W +++ + + E A+ E L
Sbjct: 425 KCGDVGEASKLFDEMAER-NVVSWNTMIMAHAVHGQSEEAIRLFEQL 470
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 298/480 (62%), Gaps = 8/480 (1%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C E +++H+ ++K F+ +I + + GDL A +F ++
Sbjct: 413 FPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEML 472
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +N++I Y+ + + + L++ M + + DK T+ VI +C L
Sbjct: 473 VKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEE-----VQADKVTMVKVISACTHLGDW 527
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S+ + ++ + ++ N L+D Y + +L A KVF +M D++ V N +I Y
Sbjct: 528 SMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAY 587
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G + A+ +FD++P ++SW++MI Y+ ++++L++FRQMQ ++PD + I
Sbjct: 588 AKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIA 647
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL ACA LG+L+LG+WIH Y +N++ T++ N+LI+M+ KCGC+ +A Q+F +M E+
Sbjct: 648 SVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEK 707
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +SW+++I GLAN+G +A+++F+ M PN++TF+G+L ACA+ EGL +F
Sbjct: 708 DTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHF 767
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ MK H++E +++HYGC+V +L RAG+L++A N I EMP+ PD +W LL +C+T+ N
Sbjct: 768 ERMKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGN 827
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+ +A +A + L L+P ++G+Y+LLSNIYA RW D +R+ + +++K+P CS+++
Sbjct: 828 VAVAEVATKKLSELDPSNSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSVVD 887
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 214/316 (67%), Gaps = 1/316 (0%)
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M +++V+WN +I+G+A G+++ AR+LFD+MP +VSWT +I GYT YAEA+ +F
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
R M GI P EI++++V+PA + LG + +GE +H YC K ++ + N+LI++Y K
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKI 120
Query: 298 GCINQASQLFDQMVER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
G + + ++FD+M++R ++VSW+++I G A HG + +A+ LF EM+R + PN ITF+ +
Sbjct: 121 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSV 180
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
++AC+H G +GL +F SM +++I+ +I+H+GC++D+LGRAGRL +A IIE +P++
Sbjct: 181 INACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEV 240
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
+ +W LL C Y +E+ A++ + LE E G++ +LSN+ + GR+ D + RK
Sbjct: 241 NVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARK 300
Query: 477 LIRSKSMKKTPGCSLI 492
L+ + + K PG +L+
Sbjct: 301 LLDERKIVKVPGLALV 316
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 209/402 (51%), Gaps = 18/402 (4%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMI-DVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
+KK+H ++ L + ++K+I DL +A +F+Q++ P FL+N ++R
Sbjct: 327 VKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLA 386
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
+ AI YK+ + PD T PFV+K+CA P G+Q+H+HV K G
Sbjct: 387 QSDAPKDAIVFYKKAQEKG-----MKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGF 441
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
N+L+ LY C +L+ A +F+EM +D+V+WN+LI GY++ + K+ LF+
Sbjct: 442 LLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFEL 501
Query: 209 MPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
M + V+ +IS TH+G ++ A + R ++ IE D +++ ++G
Sbjct: 502 MQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQ 561
Query: 265 LELGEWI-HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
L+ E + DKN TV NA+I Y K G + A ++FDQ+ +D++SWS++I
Sbjct: 562 LQSAEKVFSQMKDKN-----TVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMIC 616
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
+ ++ LF +MQR KV P+ + +LSACAH G + G D ++R+ +I+
Sbjct: 617 AYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRN-NIK 675
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
L+D+ + G + +AL + EM K D W S++
Sbjct: 676 TDTIMENSLIDMFAKCGCMQEALQVFTEMEEK-DTLSWNSII 716
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 42/290 (14%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G++ YA LLF Q+ NV + +I YT LY A+ L++ M+ I P + T
Sbjct: 20 GEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMM-----AGGISPSEIT 74
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ V+ + + L +G+ +H + K G+ S + N+L+DLY K + + KVF+EM
Sbjct: 75 VLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEML 134
Query: 180 D-RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
D R++V+W ++ISG+A H G EAL++F
Sbjct: 135 DRRNLVSWTSIISGFA------------------------------MH-GLSVEALELFA 163
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKC 297
+M+ GI P+ I+ +SV+ AC+ G +E G + + ++ +I+M +
Sbjct: 164 EMRRAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRA 223
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGK---AHKAIHLFHEMQR 343
G + +A Q+ + + VE +V+ W ++G + +G+ +AI + +++R
Sbjct: 224 GRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLER 273
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 301/564 (53%), Gaps = 76/564 (13%)
Query: 14 EDRFVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL--- 67
E F I +SC + E K++H +LK L + F+ T +I++ G+L A L
Sbjct: 128 EYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFD 187
Query: 68 ----------------------------LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINL 99
LF ++ +V +NAMI Y + A+
Sbjct: 188 KSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAF 247
Query: 100 YKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP-SLGKQIHAHVCKFGLKSHSITENAL 158
+++M R + + P+ T+ V+ +CA LG + + + GL S+ N L
Sbjct: 248 FEEMRR-----AKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGL 302
Query: 159 LDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWT 218
+D+Y KC G +++A LF+K+ +VSW
Sbjct: 303 IDMYVKC-------------------------------GDLEEASNLFEKIQDKNVVSWN 331
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
MI GYTH+ Y EAL +FR+M I+P++++ +S+LPACA LG+L+LG+W+H Y DKN
Sbjct: 332 VMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKN 391
Query: 279 -HLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
++ TV + +LI+MY KCG + A ++FD M + + +W+ +I G A HG A+
Sbjct: 392 MKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALG 451
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF M P+DITF+G+L+AC H G + G YF SM +D+ + K+ HYGC++DL
Sbjct: 452 LFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLF 511
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
GRAG D+A +++ M MKPD IW SLL +CR + +E+A +HL LEPE+ YV
Sbjct: 512 GRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYV 571
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFW 516
LLSNIYA GRWEDV+++R + MKK PGCS IEV++ V EF+ GD P +I+
Sbjct: 572 LLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYK 631
Query: 517 LLELLALHQDRA---KDVIDIMYE 537
+L+ + + ++A D +++Y+
Sbjct: 632 MLDEIDMRLEKAGFVPDTSEVLYD 655
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 250/425 (58%), Gaps = 14/425 (3%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
+L +C+ L LK+IH+QI+K L ++F ++K+I+ C + GDL+YA LFK ++ PN
Sbjct: 34 LLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNH 93
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++N MIR +++ LA+ Y M+ S P+++T P + KSC + GK
Sbjct: 94 VIWNHMIRGLSSSESPFLALEYYVHMI-----SSGTEPNEYTFPSIFKSCTKIRGAHEGK 148
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
Q+HAHV K GL+ ++ +L+++Y + EL+ A VF++ + RD V++ LI+GYA G
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ +AR LFD++P +VSW AMISGY G EA+ F +M+ + P+ +++SVL
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLS 268
Query: 258 ACAQLG-SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACAQ G SL+LG W+ + + L + N LI+MY+KCG + +AS LF+++ +++VV
Sbjct: 269 ACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVV 328
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MYF 373
SW+ +IGG + +A+ LF M + + PND+TF+ +L ACA+ G + G Y
Sbjct: 329 SWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYV 388
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
D K +++ + + L+D+ + G L A I + M K A W +++S + +
Sbjct: 389 D--KNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLA-TWNAMISGFAMHGH 445
Query: 434 LEIAV 438
+ A+
Sbjct: 446 TDTAL 450
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 183/491 (37%), Positives = 281/491 (57%), Gaps = 39/491 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY---ASLLFKQVKE 74
+ +L C +L ELK+I +K L ++TK+I+ C +Y A LF Q+ +
Sbjct: 33 LSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
++ L+N M R Y ++ LA +L+ ++L S +LPD +T ++K+CA
Sbjct: 93 KDIILFNIMARGYARSNSPYLAFSLFGELL-----CSGLLPDDYTFSSLLKACASSKALR 147
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G +H K GL + L+++Y +C++
Sbjct: 148 EGMGLHCFAVKLGLNHNIYICPTLINMYAECND--------------------------- 180
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
M AR +FD+M IVS+ A+I+GY EAL +FR++Q IEP +++++S
Sbjct: 181 ----MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLS 236
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
V+ +CA LG+L+LG+WIH Y K + + ALI+M+ KCG + A +F+ M RD
Sbjct: 237 VIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRD 296
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+WS +I A HG KAI +F EM+R V P++ITF+GLL AC+H G +G YF
Sbjct: 297 TQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFY 356
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
SM + + I I+HYGC+VDLLGRAG LD+A N ++++ +K +W +LLS+C T+ N+
Sbjct: 357 SMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNV 416
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E+A +E + L+ G+YV+LSN+YA+ GRWEDV+ +RKL++ + + K PGCS +EV
Sbjct: 417 EMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEV 476
Query: 495 NNEVQEFVSGD 505
NN V EF SGD
Sbjct: 477 NNVVHEFFSGD 487
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 150/323 (46%), Gaps = 41/323 (12%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C + L++ +H +K L+ + ++ +I++ D+ A +F +++
Sbjct: 133 FSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEME 192
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+P + YNA+I Y + A++L++++ S I P T+ VI SCA L
Sbjct: 193 QPCIVSYNAIITGYARSSQPNEALSLFREL-----QASNIEPTDVTMLSVIMSCALLGAL 247
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LGK IH +V K G + AL+D++ KC L +A +FE M RD AW+ +I +
Sbjct: 248 DLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAF 307
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A TH G +A+ +F +M+ G+ PDEI+ +
Sbjct: 308 A------------------------------TH-GDGLKAISMFEEMKREGVRPDEITFL 336
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGCINQASQLFDQM-V 311
+L AC+ G +E G K + + + ++++ + G +++A D++ +
Sbjct: 337 GLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEI 396
Query: 312 ERDVVSWSTVIGGLANHGKAHKA 334
+ + W T++ + HG A
Sbjct: 397 KATPILWRTLLSACSTHGNVEMA 419
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 301/526 (57%), Gaps = 40/526 (7%)
Query: 11 KELEDRFVPIL-QSCENLIELKKIHT-QILKYLLSQSNFLVTKMIDVCNSG--GDLAYAS 66
K R P L + C +L ++K++H +L+ LS S+ L ++I G G A+A
Sbjct: 4 KSGTQRQQPALWRRCRSLRQIKQVHALMVLQGFLSDSSAL-RELIFASAVGVRGGTAHAR 62
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL--PDKFTLPFVI 124
L+F ++ P+ F+YN +IR ++ A+++Y +M R L+ PDK T PFV+
Sbjct: 63 LVFDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVL 122
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL----------------------- 161
++CA + G Q+HAHV K G +S + NAL+ +
Sbjct: 123 RACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAV 182
Query: 162 --------YGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
+ + ++ A ++F+E +D+V+WN +I+ YA+LG M AR LFD P
Sbjct: 183 AWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRD 242
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
+VSW AMISGY GS +A+++F QMQ +G +PD ++++S+L ACA G L+ G +H
Sbjct: 243 VVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHG 302
Query: 274 YCDK--NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
+ + + T + NALI+MY KCG + A ++F M +++V +W+++IGGLA HG A
Sbjct: 303 FLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHA 362
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
++I +F +M + V P++ITF+ +L+AC+H G ++G YF M++ + IE I+HYGC
Sbjct: 363 TESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGC 422
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VD+L R G L +A I M ++P+ IW +LL +CR + +E+A A LL +
Sbjct: 423 MVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDA 482
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
+G++VLLSNIYA G W MRKL+ + K G ++I+ +++
Sbjct: 483 SGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVIDSSSK 528
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 295/507 (58%), Gaps = 10/507 (1%)
Query: 19 PILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPN 76
P L++C ++ E K+I + LSQ + ++++ +S GD+ ++ +F Q+ P
Sbjct: 10 PSLKNCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPSPT 69
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +N++IR ++ +++++ +MLR + PD T PFV K+ A L L
Sbjct: 70 ISNWNSIIRGFSKGKNPNPSVSVFVKMLRFG-----VCPDHLTYPFVAKAVARLSELRLA 124
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+H + K GL N+L+ +YG C ++ A KVF+EM R+ V+WN ++ GYA+
Sbjct: 125 LAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAKC 184
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A +F MP +VSW++MI G G Y AL +F +M++VG + + +++VSVL
Sbjct: 185 GDLDSAHQVFXSMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANXVTMVSVL 244
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD--QMVERD 314
ACA LG+LE G +H Y N + V+ +L++MY KCG I +A +F M + D
Sbjct: 245 CACAHLGALEXGRXMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTD 304
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V+ W+T+IGGLA HG +++ LF EMQ L + P++IT++ L SACAH G +E +F
Sbjct: 305 VLMWNTIIGGLATHGLVXESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFK 364
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
S+ + + K EHY C+VD+L RAG+L +A + I +MPM+P A + G+LL+ C +
Sbjct: 365 SLGKQGMVP-KSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRF 423
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
++A L+ LEP+ G Y+ LSN+YA W++ MR+ + + +KK+PG S +EV
Sbjct: 424 DLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVEV 483
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLELL 521
+ F++ D T L+ I+ +L +
Sbjct: 484 LGTLHRFIAHDKTHNDLEKIYMMLNTI 510
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 301/526 (57%), Gaps = 40/526 (7%)
Query: 11 KELEDRFVPIL-QSCENLIELKKIHT-QILKYLLSQSNFLVTKMIDVCNSG--GDLAYAS 66
K R P L + C +L ++K++H +L+ LS S+ L ++I G G A+A
Sbjct: 4 KSGTQRQQPALWRRCRSLRQIKQVHALMVLQGFLSDSSAL-RELIFASAVGVRGGTAHAR 62
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL--PDKFTLPFVI 124
L+F ++ P+ F+YN +IR ++ A+++Y +M R L+ PDK T PFV+
Sbjct: 63 LVFDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVL 122
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL----------------------- 161
++CA + G Q+HAHV K G +S + NAL+ +
Sbjct: 123 RACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAV 182
Query: 162 --------YGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
+ + ++ A ++F+E +D+V+WN +I+ YA+LG M AR LFD P
Sbjct: 183 AWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRD 242
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
+VSW AMISGY GS +A+++F QMQ +G +PD ++++S+L ACA G L+ G +H
Sbjct: 243 VVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHG 302
Query: 274 YCDK--NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
+ + + T + NALI+MY KCG + A ++F M +++V +W+++IGGLA HG A
Sbjct: 303 FLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHA 362
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
++I +F +M + V P++ITF+ +L+AC+H G ++G YF M++ + IE I+HYGC
Sbjct: 363 TESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGC 422
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VD+L R G L +A I M ++P+ IW +LL +CR + +E+A A LL +
Sbjct: 423 MVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDA 482
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
+G++VLLSNIYA G W MRKL+ + K G ++I+ +++
Sbjct: 483 SGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVIDSSSK 528
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 188/486 (38%), Positives = 282/486 (58%), Gaps = 12/486 (2%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T M+ GDL A F ++ E +V +NAM AY A+NL+ QML +
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEG-- 253
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I PD T I SC+ + P+L I + + + +S + ALLD++ K L
Sbjct: 254 ---ITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310
Query: 170 EAHKVFEEM-TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A +F+E+ + R+ V WN +IS Y R+G++ AR LFD MP +VSW +MI+GY G
Sbjct: 311 IARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNG 370
Query: 229 SYAEALDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
A ++++F++M + I+PDE++I SVL AC +G+L+L W+ + ++
Sbjct: 371 ESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGF 430
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
N+LI MY KCG + A ++F M RDVVS++T+I G A +G +AI L M+ +
Sbjct: 431 NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIE 490
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+ +T+IG+L+AC+H G NEG F S++ ++HY C+VDLLGRAG LD+A
Sbjct: 491 PDHVTYIGVLTACSHAGLLNEGKNVFKSIQAP-----TVDHYACMVDLLGRAGELDEAKM 545
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I+ MPMKP A ++GSLL++ R + + + +A L LEP++ GNYVLLSNIYA GR
Sbjct: 546 LIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGR 605
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
WEDV R+R++++ +KK+ G S +E +V +F GD + KDI+ LL L R
Sbjct: 606 WEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKR 665
Query: 528 AKDVID 533
V D
Sbjct: 666 VGFVAD 671
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 214/476 (44%), Gaps = 79/476 (16%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS-GGDLAYASLLFKQVKEP 75
V + N+ +L++ H ++ L N+ V+ ++ C AY +F P
Sbjct: 4 LVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSP 63
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL-PDKFTLPFVIKSCAGLLCPS 134
+ +Y+ M++ Y+ + ++L+K T SL L P F ++IK L
Sbjct: 64 DASVYSCMLKYYSRMGAHNQVVSLFKC------THSLNLRPQPFVYIYLIK-----LAGK 112
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS--- 191
G HA+V K G NA+LD+Y K ++ A +FE+M +R + WN++IS
Sbjct: 113 SGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 192 ----------------------------GYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
GYA++G ++ AR FD+MP ++VSW AM S
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL-- 281
Y EAL++F QM GI PD+ + V + +C+ +G L + I D+ H++
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 282 ------------------------------RRTVICNALIEMYIKCGCINQASQLFDQMV 311
R V N +I Y + G ++ A +LFD M
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+RDVVSW+++I G A +G++ +I LF EM + + P+++T +LSAC H G
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
D + R+ +I+ I + L+ + + G + A I + M + D + +L+S
Sbjct: 413 WVLD-IVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLIS 466
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+F P ++ M+ Y+ +G++ + + +F+ + + P + ++ + G+
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
L H Y K + I NA+++MY K G ++ A LF+QM ER + W+++I G
Sbjct: 116 L-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
G +A+ LF+ M N IT+ +++ A G YFD M E
Sbjct: 171 CWKSGNETEAVVLFNMMP----ARNIITWTSMVTGYAKMGDLESARRYFDEMP-----ER 221
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLEIA 437
+ + + + +ALN+ +M + PD W +SSC + + +A
Sbjct: 222 SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLA 277
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 246/378 (65%), Gaps = 1/378 (0%)
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD-RDIVAWNNLISGYARL 196
Q+H+ + + G + +L+ Y C + A +VF+E D+V+WN +I GY +
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + +AR LFD MP +VSWT +I Y + EA++VFR+MQ+ GIEPD ++++SVL
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 211
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC LG ++LGEW+H + + L + + NA+I+MY+KCG + +A ++F+ M ++ +V
Sbjct: 212 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 271
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+T+I G A HG +A+ LF M++ V PNDITF+ +LS C+H G + G YF +M
Sbjct: 272 TWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 331
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ I+ ++EHYGC++DLLGRAG L +A +I++MP K +A IWG+LL++ RT+ + E+
Sbjct: 332 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTEL 391
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A+ HL+ LEP ++GNY+LLSNIYA+ RW+ V +R +R + ++ PG S I+V+
Sbjct: 392 GEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDG 451
Query: 497 EVQEFVSGDDTKPFLKDI 514
V EF S D + P L I
Sbjct: 452 MVHEFTSRDGSHPSLHKI 469
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 38/280 (13%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MID GDLA A LF + NV + +I AY AI ++++M +
Sbjct: 144 MIDGYVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEG---- 199
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
I PD L V+ +C L LG+ +H V + GL NA++D+Y KC + +A
Sbjct: 200 -IEPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKA 258
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
+VFE M + IV W +I+G+A G +GS
Sbjct: 259 LEVFEGMEQKSIVTWTTMIAGFALHG-----------------------------LGS-- 287
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVICNAL 290
EA+++FR+M+ + P++I+ ++VL C+ +G +LG W + ++ R +
Sbjct: 288 EAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCM 347
Query: 291 IEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHG 329
I++ + GC+ +A L M + + W ++ HG
Sbjct: 348 IDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHG 387
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 188/486 (38%), Positives = 282/486 (58%), Gaps = 12/486 (2%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T M+ GDL A F ++ E +V +NAM AY A+NL+ QML +
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEG-- 253
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I PD T I SC+ + P+L I + + + +S + ALLD++ K L
Sbjct: 254 ---ITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310
Query: 170 EAHKVFEEM-TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A +F+E+ + R+ V WN +IS Y R+G++ AR LFD MP +VSW +MI+GY G
Sbjct: 311 IARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNG 370
Query: 229 SYAEALDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
A ++++F++M + I+PDE++I SVL AC +G+L+L W+ + ++
Sbjct: 371 ESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGF 430
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
N+LI MY KCG + A ++F M RDVVS++T+I G A +G +AI L M+ +
Sbjct: 431 NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIE 490
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+ +T+IG+L+AC+H G NEG F S++ ++HY C+VDLLGRAG LD+A
Sbjct: 491 PDHVTYIGVLTACSHAGLLNEGKNVFKSIQAP-----TVDHYACMVDLLGRAGELDEAKM 545
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I+ MPMKP A ++GSLL++ R + + + +A L LEP++ GNYVLLSNIYA GR
Sbjct: 546 LIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGR 605
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
WEDV R+R++++ +KK+ G S +E +V +F GD + KDI+ LL L R
Sbjct: 606 WEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKR 665
Query: 528 AKDVID 533
V D
Sbjct: 666 VGFVAD 671
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 214/476 (44%), Gaps = 79/476 (16%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS-GGDLAYASLLFKQVKEP 75
V + N+ +L++ H ++ L N+ V+ ++ C AY +F P
Sbjct: 4 LVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSP 63
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL-PDKFTLPFVIKSCAGLLCPS 134
+ +Y+ M++ Y+ + ++L+K T SL L P F ++IK L
Sbjct: 64 DASVYSCMLKYYSRMGAHNQVVSLFKC------THSLNLRPQPFVYIYLIK-----LAGK 112
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS--- 191
G HA+V K G NA+LD+Y K ++ A +FE+M +R + WN++IS
Sbjct: 113 SGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCW 172
Query: 192 ----------------------------GYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
GYA++G ++ AR FD+MP ++VSW AM S
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL-- 281
Y EAL++F QM GI PD+ + V + +C+ +G L + I D+ H++
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 282 ------------------------------RRTVICNALIEMYIKCGCINQASQLFDQMV 311
R V N +I Y + G ++ A +LFD M
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+RDVVSW+++I G A +G++ +I LF EM + + P+++T +LSAC H G
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
D + R+ +I+ I + L+ + + G + A I + M + D + +L+S
Sbjct: 413 WVLD-IVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLIS 466
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+F P ++ M+ Y+ +G++ + + +F+ + + P + ++ + G+
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
+ H Y K + I NA+++MY K G ++ A LF+QM ER + W+++I G
Sbjct: 116 M-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
G +A+ LF+ M N IT+ +++ A G YFD M E
Sbjct: 171 CWKSGNETEAVVLFNMMP----ARNIITWTSMVTGYAKMGDLESARRYFDEMP-----ER 221
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLEIA 437
+ + + + +ALN+ +M + PD W +SSC + + +A
Sbjct: 222 SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLA 277
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 293/497 (58%), Gaps = 9/497 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ L +C L L K++H Q+++ L ++ + ++++ G A +F +
Sbjct: 293 YTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLH 352
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ N + +I + + ++ L+ QM L+ D+F L +I C +
Sbjct: 353 DRNNVAWTVLISGFLQYGCFTESVELFNQM-----RAELMTLDQFALATLISGCCSRMDL 407
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+Q+H+ K G + N+L+ +Y KCD L A +F M ++DIV+W ++I+ Y
Sbjct: 408 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAY 467
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISI 252
+++G + KAR FD M +++W AM+ Y G+ + L +++ M + PD ++
Sbjct: 468 SQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTY 527
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V++ CA LG+ +LG+ I K L+ T + NA+I MY KCG I +A ++FD +
Sbjct: 528 VTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNV 587
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+D+VSW+ +I G + HG +AI +F ++ + P+ I+++ +LS C+H+G EG Y
Sbjct: 588 KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFY 647
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
FD MKR H+I +EH+ C+VDLLGRAG L +A ++I++MPMKP A++WG+LLS+C+ +
Sbjct: 648 FDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHG 707
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N E+A +A +H+ L+ D+G+Y+L++ IYA G+ +D +++RKL+R K +KK PG S +
Sbjct: 708 NNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWM 767
Query: 493 EVNNEVQEFVSGDDTKP 509
EV+N+V F + D + P
Sbjct: 768 EVDNKVHVFKADDVSHP 784
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 198/422 (46%), Gaps = 9/422 (2%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L+ A LF ++ +V +N ++ Y + Y +++ + M R + P+ FT
Sbjct: 105 GRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS----WPNAFT 160
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L +KSC L SL Q+ A V KF + S AL+D++ +C + A ++F +
Sbjct: 161 LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK 220
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+ + N++++GY + + A LFD MP +VSW M+S + G EALD+
Sbjct: 221 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 280
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
MQ G+ D + S L ACA+L SL G+ +H +N + +AL+E+Y K GC
Sbjct: 281 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 340
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+A +F+ + +R+ V+W+ +I G +G +++ LF++M+ + + L+S
Sbjct: 341 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 400
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C G + I+ + L+ + + L A I M K D
Sbjct: 401 CCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFRFMNEK-DIV 458
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
W S++++ YS + A E + ++ + + Y +HG ED RM K++
Sbjct: 459 SWTSMITA---YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVML 515
Query: 480 SK 481
S+
Sbjct: 516 SE 517
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 150/343 (43%), Gaps = 37/343 (10%)
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF-EEMTDR 181
++SC + + +H + GL S +N LL Y C L +A ++ ++
Sbjct: 30 ALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHP 89
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+++ N +++GYA+LG++ A LF +MP + SW ++SGY Y +L+ F M
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 242 MVGIE-PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
G P+ ++ + +C LG L + K + + AL++M+++CG +
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 209
Query: 301 NQAS-------------------------------QLFDQMVERDVVSWSTVIGGLANHG 329
+ AS +LFD M ERDVVSW+ ++ L+ G
Sbjct: 210 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 269
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD-HHIEHKIEH 388
+ +A+ + +MQ V + T+ L+ACA G + R+ HI+ +
Sbjct: 270 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA- 328
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
LV+L ++G +A + + + + W L+S Y
Sbjct: 329 -SALVELYAKSGCFKEAKGVFNSLHDRNNVA-WTVLISGFLQY 369
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 272/448 (60%), Gaps = 9/448 (2%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA---GLLCPSLG 136
+ + I + N+ + A + + QML + + P+ TL ++ +CA + G
Sbjct: 55 WTSSISHHCKNNNFLKAASEFIQMLE-----AEVEPNHITLITLLSACAHSPSKTSITFG 109
Query: 137 KQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
+H H K G + + AL+D+Y KC +L A VF++M R++V+WN +I GY +
Sbjct: 110 AALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMK 169
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + A LFDK+P +VSWT +I G+ Y EAL+ FR+MQ+ G+ PD ++++++
Sbjct: 170 NGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAI 229
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ ACA LG+L LG W+H K + N+LI+MY +CGCI A Q+FD M +R++
Sbjct: 230 ISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNL 289
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSW+++I G A +G A KA+ F M++ + PN +++ L+AC+H G +EGL F
Sbjct: 290 VSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFAD 349
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
+KRDH +IEHYGCLVDL RAGRL +A ++I++MPM P+ + GSLL++CRT ++E
Sbjct: 350 IKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVE 409
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A M++ + L P NYVL SNIYA G+W+ S++R+ ++ + ++K S IE++
Sbjct: 410 LAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEID 469
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELLAL 523
+ + +FVSGD I+ LELL+
Sbjct: 470 SGIHKFVSGDKYHEENDYIYSALELLSF 497
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 39/247 (15%)
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL---GSLELGEWI 271
VSWT+ IS + ++ +A F QM +EP+ I+++++L ACA S+ G +
Sbjct: 53 VSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAAL 112
Query: 272 HMYCDKNHL-LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
H + K+ + ++ ALI+MY KCG ++ A +FDQM R++VSW+T+I G +G
Sbjct: 113 HTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGD 172
Query: 331 AHKAIHL-------------------------------FHEMQRLKVPPNDITFIGLLSA 359
A+ L F EMQ V P+ +T I ++SA
Sbjct: 173 VDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISA 232
Query: 360 CAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
CA+ G GL ++ MK++ K+ L+D+ R G ++ A + + M + +
Sbjct: 233 CANLGALGLGLWVHRLVMKKEFRDNVKV--LNSLIDMYARCGCIELARQVFDGMSQR-NL 289
Query: 419 KIWGSLL 425
W S++
Sbjct: 290 VSWNSII 296
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 142/320 (44%), Gaps = 43/320 (13%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MID GD+ A LF ++ NV + +I + Y A+ +++M +
Sbjct: 163 MIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQL-----A 217
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
++PD T+ +I +CA L LG +H V K + + N+L+D+Y +C + A
Sbjct: 218 GVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELA 277
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
+VF+ M+ R++V+WN++I G+A G L DK
Sbjct: 278 RQVFDGMSQRNLVSWNSIIVGFAVNG-------LADK----------------------- 307
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVICNAL 290
AL FR M+ G+EP+ +S S L AC+ G ++ G I ++H R L
Sbjct: 308 -ALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCL 366
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV---P 347
+++Y + G + +A + +M ++ V+G L + + L ++ + +V P
Sbjct: 367 VDLYSRAGRLKEAWDVIKKM---PMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYP 423
Query: 348 PNDITFIGLLSACAHTGFWN 367
D ++ + A G W+
Sbjct: 424 GGDSNYVLFSNIYAAVGKWD 443
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
NQ L + VSW++ I + KA F +M +V PN IT I LLSAC
Sbjct: 38 NQTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSAC 97
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-----CLVDLLGRAGRLDQALNIIEEMPMK 415
AH+ ++ + F + H +H L+D+ + G+LD A + ++M ++
Sbjct: 98 AHSP--SKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVR 155
>gi|347954488|gb|AEP33744.1| chloroplast biogenesis 19, partial [Aethionema grandiflorum]
Length = 413
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 250/395 (63%), Gaps = 4/395 (1%)
Query: 115 PDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELIEA 171
P+ T +I C S LG +H + CK GL ++H + A+L +Y K +A
Sbjct: 15 PNHITFIALISGCGDFPTGSETLGDLLHGYACKLGLDRTHVMVGTAILGMYSKRCRFGKA 74
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
VF+ M D++ V WN +I Y R G++ +A LFD+MP ++SWTAMI+G+ G +
Sbjct: 75 RCVFDYMEDKNSVTWNTMIDAYMRSGKVDRAVKLFDEMPDPDLISWTAMINGFVKKGFHE 134
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL FR+MQ+ G++PD ++I++ L AC LG+L G W+H Y + N+LI
Sbjct: 135 EALVWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWVHRYVLSQDFKNNVRVNNSLI 194
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
++Y +CGC+ A ++FD+M +R VVSW++VI G A +G AH+++ F +MQ P+ +
Sbjct: 195 DLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGSAANGNAHESLVYFRKMQEEGFNPDAV 254
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
TF G L+AC+H G EG+ YF +MKRD+ I +IEHYGCLVDL RAGRL+ AL +++
Sbjct: 255 TFTGALTACSHVGLVEEGIQYFQTMKRDYKISPRIEHYGCLVDLYSRAGRLEDALKLVQS 314
Query: 412 MPMKPDAKIWGSLLSSCRTY-SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
M MKP+ + GSLL++CRT+ +N E+A M+HL + + NYV+LSN+YA G+WE
Sbjct: 315 MSMKPNEVVIGSLLAACRTHGNNTELAERLMKHLSEMNVKGHSNYVILSNMYAADGKWEG 374
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
+MR+ ++ +KK PG S IE+++ F++GD
Sbjct: 375 AXKMRRKMKGLGLKKQPGFSSIEIDDHTHVFMAGD 409
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 43/271 (15%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ Y+ +++ MID G + A LF ++ +P++ + AMI + + A
Sbjct: 77 VFDYMEDKNSVTWNTMIDAYMRSGKVDRAVKLFDEMPDPDLISWTAMINGFVKKGFHEEA 136
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + + +C L S G +H +V K++ N
Sbjct: 137 LVWFREM-----QISGVKPDYVAIIAALAACTNLGALSFGLWVHRYVLSQDFKNNVRVNN 191
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI-- 214
+L+DLY +C + A +VF++M R +V+WN++I G A G ++ + F KM
Sbjct: 192 SLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGSAANGNAHESLVYFRKMQEEGFNP 251
Query: 215 --VSWTAMISGYTHIGSYAEALDVFRQM-------------------------------- 240
V++T ++ +H+G E + F+ M
Sbjct: 252 DAVTFTGALTACSHVGLVEEGIQYFQTMKRDYKISPRIEHYGCLVDLYSRAGRLEDALKL 311
Query: 241 -QMVGIEPDEISIVSVLPACAQLG-SLELGE 269
Q + ++P+E+ I S+L AC G + EL E
Sbjct: 312 VQSMSMKPNEVVIGSLLAACRTHGNNTELAE 342
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 181/511 (35%), Positives = 294/511 (57%), Gaps = 10/511 (1%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
L + + + C +E +K+ ++ L N +++ + G + A LF ++
Sbjct: 97 LSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKL----GMIKPARKLFDKM 152
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
E +V +N M+ A+ + A+ Y + + I + F+ V+ C L
Sbjct: 153 PEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLG-----IQCNGFSFAGVLTVCVKLKE 207
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
L +Q+H + G S+ + +++LD Y KC + +A K+F+EM+ RD++AW ++SG
Sbjct: 208 VGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSG 267
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA+ G MK A LF +MP VSWTA+ISGY G +AL++F +M + + PD+ +
Sbjct: 268 YAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTF 327
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
S L ACA + SL+ G+ IH Y + + T++ +ALI+MY KCG + ++FD M
Sbjct: 328 SSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGN 387
Query: 313 R-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+ DVV W+T+I LA HG +AI + +M R P+ ITF+ +L+AC+H+G +GL
Sbjct: 388 KLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLN 447
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
+F+SM D+ I EHY CL+DLLGRAG ++ ++ +E+MP KPD ++W +LL CR +
Sbjct: 448 FFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIH 507
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
++E+ A E L+ LEP+ + YVLLS+IYA GRWE V ++R+L+ + +KK S
Sbjct: 508 GHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISW 567
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+E+ N+V F D + P + I+ +LE LA
Sbjct: 568 LEIENKVHSFSVSDSSHPLKEQIYSVLEQLA 598
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 178/362 (49%), Gaps = 33/362 (9%)
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK-SHSITENALLDLYGKCDELIEAHKV 174
D TL +++ CA GK++H H+ GLK + N L+++Y KC + +EA KV
Sbjct: 58 DSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKV 117
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F++M+ R++ +WNN++SGYA+LG +K AR LFDKMP +VSW M+ + G + EAL
Sbjct: 118 FDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEAL 177
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+ + + +GI+ + S VL C +L + L +H L V+ +++++ Y
Sbjct: 178 RFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAY 237
Query: 295 IKCGCINQASQLFDQMVERDV-------------------------------VSWSTVIG 323
+KCG + A +LFD+M RDV VSW+ +I
Sbjct: 238 VKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALIS 297
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
G A +G HKA+ LF +M V P+ TF L ACA G + R +
Sbjct: 298 GYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQP 357
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+ I L+D+ + G L + + M K D +W +++S+ + E A+ ++
Sbjct: 358 NTIV-VSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDD 416
Query: 444 LL 445
++
Sbjct: 417 MV 418
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR-TVICNAL 290
EA+ + G+ D ++ S+L CA +L G+ +H++ L R T + N L
Sbjct: 42 EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND 350
I MY KCG +A ++FD+M R++ SW+ ++ G A G A LF +M P D
Sbjct: 102 INMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKM-----PEKD 156
Query: 351 -ITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+++ ++ A A G+W+E L ++ ++
Sbjct: 157 VVSWNTMVIAHAQCGYWDEALRFYSEFRQ 185
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 185/509 (36%), Positives = 297/509 (58%), Gaps = 45/509 (8%)
Query: 20 ILQSCENLIEL--------KKIHTQILKYLLSQSNFLVTK--MIDVCNSGGDLAYASLLF 69
IL+ C +L++L K+IH +++ + N K + + + +++A+ +F
Sbjct: 33 ILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIF 92
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
Q++ PN+F +N MIR + + A+ L+ QM S ILPD T PF+ K+ A
Sbjct: 93 NQIQAPNIFTWNTMIRGFAESENPSPAVELFSQM----HAASSILPDTHTFPFLFKAVAK 148
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L+ SLG+ IH+ V + G S +N+L+ +Y
Sbjct: 149 LMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS-------------------------- 182
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+ G+A + A +F+ M Y V+W ++I+G+ G EAL ++R+M G+EPD
Sbjct: 183 VFGFA-----ESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDG 237
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++VS+L AC +LG+L LGE +HMY K L++ NAL+++Y KCG A ++FD+
Sbjct: 238 FTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDE 297
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M ER VVSW+++I GLA +G ++A+ LF E++R + P++ITF+G+L AC+H G +EG
Sbjct: 298 MEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG 357
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF MK ++ I +IEH+GC+VDLL RAG++ A + I MP+ P+A IW +LL +C
Sbjct: 358 FNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACT 417
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ +LE+ +A + LE +G++VLLSN+YA RW DV +RK++ K +KKTPG
Sbjct: 418 IHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGY 477
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
SL+E+ N V EF+ GD + P ++ + +L
Sbjct: 478 SLVELKNRVYEFIMGDRSHPQSEETYAML 506
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 246/378 (65%), Gaps = 1/378 (0%)
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLISGYARL 196
Q+H+ + + G + +L+ Y C + A +VF+E D+V+WN +I GY +
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + +AR LFD MP +VSWT +I Y + EA++VFR+MQ+ GIEPD ++++SVL
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 215
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC LG ++LGEW+H + + L + + NA+I+MY+KCG + +A ++F+ M ++ +V
Sbjct: 216 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 275
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+T+I G A HG +A+ LF M++ V PNDITF+ +LS C+H G + G YF +M
Sbjct: 276 TWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 335
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ I+ ++EHYGC++DLLGRAG L +A +I++MP K +A IWG+LL++ RT+ + E+
Sbjct: 336 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTEL 395
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A+ HL+ LEP ++GNY+LLSNIYA+ RW+ V +R +R + ++ PG S I+V+
Sbjct: 396 GEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDG 455
Query: 497 EVQEFVSGDDTKPFLKDI 514
V EF S D + P L I
Sbjct: 456 MVHEFTSRDGSHPSLHKI 473
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 38/280 (13%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MID GDLA A LF + NV + +I AY AI ++++M +
Sbjct: 148 MIDGYVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEG---- 203
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
I PD L V+ +C L LG+ +H V + GL NA++D+Y KC + +A
Sbjct: 204 -IEPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKA 262
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
+VFE M + IV W +I+G+A G +A LF
Sbjct: 263 LEVFEGMEQKSIVTWTTMIAGFALHGLGLEAVELF------------------------- 297
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVICNAL 290
R+M+ + P++I+ ++VL C+ +G +LG W + ++ R +
Sbjct: 298 ------RRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCM 351
Query: 291 IEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHG 329
I++ + GC+ +A L M + + W ++ HG
Sbjct: 352 IDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHG 391
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 293/497 (58%), Gaps = 9/497 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ L +C L L K++H Q+++ L ++ + ++++ G A +F +
Sbjct: 273 YTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLH 332
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ N + +I + + ++ L+ QM L+ D+F L +I C +
Sbjct: 333 DRNNVAWTVLISGFLQYGCFTESVELFNQM-----RAELMTLDQFALATLISGCCSRMDL 387
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+Q+H+ K G + N+L+ +Y KCD L A +F M ++DIV+W ++I+ Y
Sbjct: 388 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAY 447
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISI 252
+++G + KAR FD M +++W AM+ Y G+ + L +++ M + PD ++
Sbjct: 448 SQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTY 507
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V++ CA LG+ +LG+ I K L+ T + NA+I MY KCG I +A ++FD +
Sbjct: 508 VTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNV 567
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+D+VSW+ +I G + HG +AI +F ++ + P+ I+++ +LS C+H+G EG Y
Sbjct: 568 KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFY 627
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
FD MKR H+I +EH+ C+VDLLGRAG L +A ++I++MPMKP A++WG+LLS+C+ +
Sbjct: 628 FDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHG 687
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N E+A +A +H+ L+ D+G+Y+L++ IYA G+ +D +++RKL+R K +KK PG S +
Sbjct: 688 NNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWM 747
Query: 493 EVNNEVQEFVSGDDTKP 509
EV+N+V F + D + P
Sbjct: 748 EVDNKVHVFKADDVSHP 764
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 198/422 (46%), Gaps = 9/422 (2%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L+ A LF ++ +V +N ++ Y + Y +++ + M R + P+ FT
Sbjct: 85 GRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS----WPNAFT 140
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L +KSC L SL Q+ A V KF + S AL+D++ +C + A ++F +
Sbjct: 141 LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK 200
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+ + N++++GY + + A LFD MP +VSW M+S + G EALD+
Sbjct: 201 EPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 260
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
MQ G+ D + S L ACA+L SL G+ +H +N + +AL+E+Y K GC
Sbjct: 261 MQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGC 320
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+A +F+ + +R+ V+W+ +I G +G +++ LF++M+ + + L+S
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C G + I+ + L+ + + L A I M K D
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFRFMNEK-DIV 438
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
W S++++ YS + A E + ++ + + Y +HG ED RM K++
Sbjct: 439 SWTSMITA---YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVML 495
Query: 480 SK 481
S+
Sbjct: 496 SE 497
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 150/343 (43%), Gaps = 37/343 (10%)
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF-EEMTDR 181
++SC + + +H + GL S +N LL Y C L +A ++ ++
Sbjct: 10 ALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHP 69
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+++ N +++GYA+LG++ A LF +MP + SW ++SGY Y +L+ F M
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 242 MVGIE-PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
G P+ ++ + +C LG L + K + + AL++M+++CG +
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 189
Query: 301 NQAS-------------------------------QLFDQMVERDVVSWSTVIGGLANHG 329
+ AS +LFD M ERDVVSW+ ++ L+ G
Sbjct: 190 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD-HHIEHKIEH 388
+ +A+ + +MQ V + T+ L+ACA G + R+ HI+ +
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA- 308
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
LV+L ++G +A + + + + W L+S Y
Sbjct: 309 -SALVELYAKSGCFKEAKGVFNSLHDRNNVA-WTVLISGFLQY 349
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 311/598 (52%), Gaps = 97/598 (16%)
Query: 6 GALSIKEL-EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
GA S + L E+ + L ++++H Q+L+ L + +K+I +Y
Sbjct: 95 GAPSQRRLVEEHLASLPHGLPRLRHVQELHAQVLRQGLHRDPRAASKLI--------ASY 146
Query: 65 ASLLFKQVKE---------------PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
A L ++V L N ++RAY N L A+ ++ M R
Sbjct: 147 A--LLRRVPACRCVFSAAAAPPFAPSTALLANTLLRAYALNSLPHAALAVFVDMPLRQR- 203
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
D FT F+IK+ A + + H HV K G + NAL+D Y K D L
Sbjct: 204 ------DTFTYSFLIKALATAGVTPV-RAAHTHVFKLGSVEDTFVGNALIDAYSKNDGLS 256
Query: 170 EAHKVFE-------------------------------EMTDRDIVAWNNLISGYARLGQ 198
+A KVF+ EM ++D V+WN ++ GYA+ G+
Sbjct: 257 DAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGE 316
Query: 199 -------------------------------MKKARMLFDKMPYTTIVSWTAMISGYTHI 227
M+ AR++FDKMP +V+WT M+S
Sbjct: 317 AEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQK 376
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
G EA +F +M+ IE D +++VS+L ACA+ G L LG+ IH + + L R T++C
Sbjct: 377 GLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLALGKRIHRHVRQRKLGRSTLVC 436
Query: 288 NALIEMYIKCGCINQASQLFD-QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
NAL++M+ KCGC+N+A +FD ++VE+D VSW+ +IGG A HG KA++LF +M++
Sbjct: 437 NALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGF 496
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
P+ +T I +LSAC H G EG +F +M+ D+ I+ +IEHYGC+VDLLGR G + +A+
Sbjct: 497 HPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAV 556
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
++I+ MP +P+ IWGSLLS+CR + N+E A +A L L+P + GNY +LSNIYA+ G
Sbjct: 557 DMIKSMPWEPNEVIWGSLLSACRLHKNVEYAELAANELSNLQPSNAGNYAVLSNIYAEAG 616
Query: 467 RWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
+W D+++ R ++ +KT G S IE++ EF GD P I +++ L+ H
Sbjct: 617 KWSDMAKARVQMKGTGSQKTAGSSWIELDEAFHEFTVGDRKHPESDQISDMIDRLSSH 674
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 296/558 (53%), Gaps = 71/558 (12%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ-VKEPNVFLYNAMIRAYTNNHLYGL 95
+L++ + + + TK + + S + YA LF Q + + FL N+MI+AY Y
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
+ LY RD R + PD FT + KSC+ +C G Q+H+ + +FG +
Sbjct: 61 SFALY----RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVS 116
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ----------------- 198
++D+Y K ++ A F+EM R V+W LISGY R G+
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV 176
Query: 199 ---------------MKKARMLFDKMPYTTIVSWTAMISGY------------------- 224
M AR LFD+M + T+++WT MI GY
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPER 236
Query: 225 ------THIGSYA------EALDVFRQMQ-MVGIEPDEISIVSVLPACAQLGSLELGEWI 271
T IG Y E + +F++MQ ++PD+++I+SVLPA + G+L LGEW
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGITLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H + + L ++ +C A+++MY KCG I +A ++FD+M E+ V SW+ +I G A +G A
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
A+ LF M ++ P++IT + +++AC H G EG +F M R+ + KIEHYGC
Sbjct: 357 RAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGC 414
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VDLLGRAG L +A ++I MP +P+ I S LS+C Y ++E A ++ + LEP++
Sbjct: 415 MVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQN 474
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFL 511
GNYVLL N+YA RW+D ++ ++R KK GCSLIE+N V EF+SGD T P
Sbjct: 475 DGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHR 534
Query: 512 KDIFWLLELLALHQDRAK 529
+ I +L L +H + K
Sbjct: 535 RSIHLVLGDLLMHMNEEK 552
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 296/558 (53%), Gaps = 71/558 (12%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ-VKEPNVFLYNAMIRAYTNNHLYGL 95
+L++ + + + TK + + S + YA LF Q + + FL N+MI+AY Y
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
+ LY RD R + PD FT + KSC+ +C G Q+H+ + +FG +
Sbjct: 61 SFALY----RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVS 116
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ----------------- 198
++D+Y K ++ A F+EM R V+W LISGY R G+
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV 176
Query: 199 ---------------MKKARMLFDKMPYTTIVSWTAMISGY------------------- 224
M AR LFD+M + T+++WT MI GY
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPER 236
Query: 225 ------THIGSYA------EALDVFRQMQ-MVGIEPDEISIVSVLPACAQLGSLELGEWI 271
T IG Y E + +F++MQ ++PD+++I+SVLPA + G+L LGEW
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H + + L ++ +C A+++MY KCG I +A ++FD+M E+ V SW+ +I G A +G A
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
A+ LF M ++ P++IT + +++AC H G EG +F M R+ + KIEHYGC
Sbjct: 357 RAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGC 414
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VDLLGRAG L +A ++I MP +P+ I S LS+C Y ++E A ++ + LEP++
Sbjct: 415 MVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQN 474
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFL 511
GNYVLL N+YA RW+D ++ ++R KK GCSLIE+N V EF+SGD T P
Sbjct: 475 DGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHR 534
Query: 512 KDIFWLLELLALHQDRAK 529
+ I +L L +H + K
Sbjct: 535 RSIHLVLGDLLMHMNEEK 552
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/502 (35%), Positives = 286/502 (56%), Gaps = 8/502 (1%)
Query: 26 NLIELKKIHTQILKYLLSQSNFLVTKMID---VCNSGGDLAYASLLFKQVKEPNVFLYNA 82
+ ++K+ H +IL L+ + + ++ + +S YA ++ + P VF N
Sbjct: 43 GITQIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNN 102
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
MIR + L +I+LY M R + P+K TL FV+++C+ G Q+ H
Sbjct: 103 MIRCFVKGDLPRHSISLYSHMCRS----FVAAPNKHTLTFVLQACSNAFAIREGAQVQTH 158
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLISGYARLGQMKK 201
V K G NAL+ LY C + A +VF+E+ + RD+V+WN++I G+ RLGQ+
Sbjct: 159 VIKLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISV 218
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
A+ LF +MP ++SW +ISG G +ALD F+++ + P+E +VS+L A AQ
Sbjct: 219 AQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQ 278
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
LG+LE G+ IH + + AL++MY KCGCI+++ LFD+M E+D SW+ +
Sbjct: 279 LGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVM 338
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I GLA HG +A+ LF + P ++TFIG+L+AC+ G +EG +F M +
Sbjct: 339 ICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYG 398
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
IE ++EHYGC+VDLL RAG + A+ +I MP PD +W S+L SC+ + +E+
Sbjct: 399 IEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIG 458
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
L+ ++P G+YV L+ I+A+ +WEDVS++R+L+ ++ K G SLIE V F
Sbjct: 459 NKLIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRF 518
Query: 502 VSGDDTKPFLKDIFWLLELLAL 523
V+GD +I+ +LE++ +
Sbjct: 519 VAGDKEHERTTEIYKMLEIMGV 540
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 286/482 (59%), Gaps = 13/482 (2%)
Query: 68 LFKQVK----EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
LF Q + E N+ +N MI + + Y A+ +++ M + + PD ++ V
Sbjct: 162 LFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEG-----LKPDGTSVSSV 216
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+ + L P +G QIH +V K GL +AL+D+YGKC E VF EM + D+
Sbjct: 217 LPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDV 276
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYT--TIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
A N L++G +R G + A +F + +VSWT+MI+ + G EAL++FR+MQ
Sbjct: 277 GACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQ 336
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
+ G++P+ ++I +LPAC + +L G+ H + +N + + +ALI+MY KCG +
Sbjct: 337 IEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRML 396
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+ FD M R++VSW++++ G A HGK +AI++F MQR P+ ++F +LSAC
Sbjct: 397 ASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACT 456
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
G EG YFDSM R+H +E ++EHY C+V LLGR+GRL++A +I++MP +PD+ +W
Sbjct: 457 QGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVW 516
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
G+LLSSCR ++ +++ IA + + LEP + GNY+LLSNIYA W +V +R ++RS+
Sbjct: 517 GALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSR 576
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV--IDIMYEDI 539
+KK PG S IE+ N+V ++GD + P + I L L + ++ V D + +D+
Sbjct: 577 GLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDV 636
Query: 540 GE 541
E
Sbjct: 637 EE 638
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 184/380 (48%), Gaps = 44/380 (11%)
Query: 84 IRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHV 143
I+ ++ + +G I ++ ML I+PD LP VIK+CA L GKQ+H
Sbjct: 46 IQIFSKLNHFGHVIRVFSYMLTQG-----IVPDSRVLPTVIKTCAALSALQTGKQMHCFA 100
Query: 144 CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKAR 203
GL S+ ++LL +Y + D L +A VF+++ +V + LIS +AR G++K+ +
Sbjct: 101 LVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETK 160
Query: 204 MLF----DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
LF D +VSW MISG+ GSY +A+ +F+ M + G++PD S+ SVLPA
Sbjct: 161 ELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAV 220
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD----- 314
L +G IH Y K L + +ALI+MY KC C ++ S +F++M E D
Sbjct: 221 GDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACN 280
Query: 315 ----------------------------VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
VVSW+++I + +GK +A+ LF EMQ V
Sbjct: 281 ALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGV 340
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
PN +T LL AC + G R+ I + + L+D+ + GR+ +
Sbjct: 341 KPNSVTIPCLLPACGNIAALLHGKAAHCFSLRN-GIFNDVYVGSALIDMYAKCGRMLASR 399
Query: 407 NIIEEMPMKPDAKIWGSLLS 426
+ MP + + W SL++
Sbjct: 400 LCFDMMPNR-NLVSWNSLMA 418
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 158/381 (41%), Gaps = 72/381 (18%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
+IH ++K L F+V+ +ID+ + S +F ++ E +V NA++ + N
Sbjct: 231 QIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNG 290
Query: 92 LYGLAINLYKQ-----------------------------MLRDPRTGSLILPDKFTLPF 122
L A+ ++KQ + R+ + + P+ T+P
Sbjct: 291 LVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEG-VKPNSVTIPC 349
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
++ +C + GK H + G+ + +AL+D+Y KC ++ + F+ M +R+
Sbjct: 350 LLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRN 409
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+V+WN+L++GYA G+ EA+++F MQ
Sbjct: 410 LVSWNSLMAGYAMHGKT-------------------------------FEAINIFELMQR 438
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVICNALIEMYIKCGCIN 301
G +PD +S VL AC Q G E G + +NH + R + ++ + + G +
Sbjct: 439 CGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLE 498
Query: 302 QASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV----PPNDITFIGL 356
+A + QM E D W G L + + H + L E+ +V P N +I L
Sbjct: 499 EAYAMIKQMPFEPDSCVW----GALLSSCRVHNRVDL-GEIAAKRVFELEPRNPGNYILL 553
Query: 357 LSACAHTGFWNEGLMYFDSMK 377
+ A W E M D M+
Sbjct: 554 SNIYASKAMWVEVDMVRDMMR 574
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 4/198 (2%)
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
T +S I ++ + + + VF M GI PD + +V+ CA L +L+ G+ +H
Sbjct: 38 TGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMH 97
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ + L +V+ ++L+ MY++ + A +FD++ + VV+ S +I A G+
Sbjct: 98 CFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVK 157
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+ LF++ + L V N +++ G++S +G + + ++ F +M H+E +
Sbjct: 158 ETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNM----HLEGLKPDGTSV 213
Query: 393 VDLLGRAGRLDQALNIIE 410
+L G LD L I+
Sbjct: 214 SSVLPAVGDLDMPLMGIQ 231
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 203/514 (39%), Positives = 291/514 (56%), Gaps = 49/514 (9%)
Query: 21 LQSCENLIELKKIHTQILKYLL---SQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
L C+++ +LK+IH L+ L S + FL ++++ +S DL YA +F QV PN
Sbjct: 29 LNECKDMSQLKQIHALSLRSTLPNHSTTLFLYSRILHF-SSLHDLNYAYRVFDQVDNPNS 87
Query: 78 FLYNAMIRAYTNN---HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
F++N +IRA + HL AI LY ML+ S PD T PFV+K+CA L
Sbjct: 88 FMWNILIRACAQSQSVHLKREAILLYNTMLQR----SSPFPDNHTFPFVLKACAYLFALF 143
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GKQ HAH+ K G +S N+L+ Y C
Sbjct: 144 EGKQAHAHLLKLGFQSDVYINNSLIHFYASC----------------------------- 174
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
G ++ A+ +FDKMP ++VSW AMI + G + AL +F Q Q EPD +I S
Sbjct: 175 --GSLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQFQQQFFEPDGYTIQS 232
Query: 255 VLPACAQLGSLELGEWIHMY----CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
V+ ACA L +L LG W H + C + ++ N+L++MY KCG ++ A+Q+F+ M
Sbjct: 233 VINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIATQIFEGM 292
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGFWNEG 369
+ DV SW+++I G A HGK A+ F M R+ + PN ITF+G+LSAC H NEG
Sbjct: 293 QKHDVTSWNSMILGFAMHGKGELALECFERMIRISRFVPNSITFVGVLSACNHRYMVNEG 352
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS-C 428
YFD M ++ IE ++EHYGCLVD+L RAG +D+AL ++ MPMKPD IW SLL S C
Sbjct: 353 RKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWRSLLDSCC 412
Query: 429 RTYSNLEIAV-IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
+ +++E++ IA + L E + +G YVLLS +YA RW DV +RKL+ + + K P
Sbjct: 413 KKNASVELSENIARQILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTNNGILKEP 472
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
GCSLIEV+ EF +GD + P K+I+ +L ++
Sbjct: 473 GCSLIEVDGVTHEFFAGDTSHPQTKEIYQVLNVV 506
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 288/486 (59%), Gaps = 38/486 (7%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G + A LF ++ +V +NAMI Y Y A+ L+K M++
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK---- 259
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ V+ +CA LG+Q+H + G S+ NAL+DLY KC
Sbjct: 260 -TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC---- 314
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LF+++PY ++SW +I GYTH+
Sbjct: 315 ---------------------------GELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVIC 287
Y EAL +F++M G P++++++S+LPACA LG++++G WIH+Y DK + + +
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+LI+MY KCG I A Q+F+ ++ + + SW+ +I G A HG+A + LF M+++ +
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+DITF+GLLSAC+H+G + G F +M +D+ + K+EHYGC++DLLG +G +A
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I M M+PD IW SLL +C+ + N+E+ E+L+ +EPE+ G+YVLLSNIYA GR
Sbjct: 528 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 587
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
W +V++ R L+ K MKK PGCS IE+++ V EF+ GD P ++I+ +LE + + ++
Sbjct: 588 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Query: 528 AKDVID 533
A V D
Sbjct: 648 AGFVPD 653
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 231/400 (57%), Gaps = 15/400 (3%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPN 76
+L +C+ L L+ IH Q++K L +N+ ++K+I+ C L YA +FK ++EPN
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCPSL 135
+ ++N M R + + A+ LY M+ SL +LP+ +T PFV+KSCA
Sbjct: 99 LLIWNTMFRGHALSSDPVSALKLYVCMI------SLGLLPNSYTFPFVLKSCAKSKAFKE 152
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+QIH HV K G +L+ +Y + L +AHKVF++ RD+V++ LI GYA
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G ++ A+ LFD++P +VSW AMISGY G+Y EAL++F+ M + PDE ++V+V
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ ACAQ GS+ELG +H++ D + I NALI++Y KCG + A LF+++ +DV
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MY 372
+SW+T+IGG + +A+ LF EM R PND+T + +L ACAH G + G +Y
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
D KR + + L+D+ + G ++ A + +
Sbjct: 393 ID--KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/460 (37%), Positives = 274/460 (59%), Gaps = 5/460 (1%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A +F + + + +N+MI Y+ AI L+++ML+ + D FTL ++
Sbjct: 191 ARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLG-----VEADVFTLVSLL 245
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
+ + LG+ +H ++ G++ SI NAL+D+Y KC L A VF++M D+D+V
Sbjct: 246 SASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVV 305
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+W ++++ YA G ++ A +F+ MP +VSW ++I G Y EA+++F +M + G
Sbjct: 306 SWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISG 365
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ PD+ ++VS+L C+ G L LG+ H Y N + +CN+LI+MY KCG + A
Sbjct: 366 VMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAI 425
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+F M E++VVSW+ +IG LA HG +AI +F MQ + P++ITF GLLSAC+H+G
Sbjct: 426 DIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSG 485
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+ G YFD M I +EHY C+VDLLGR G L +A+ +I++MP+KPD +WG+L
Sbjct: 486 LVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGAL 545
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
L +CR Y NLEIA M+ LL L ++G YVLLSN+Y++ RW+D+ ++RK++ +K
Sbjct: 546 LGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIK 605
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
K S IE++ +F+ D I+ +L+ L H
Sbjct: 606 KCRAISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLMDH 645
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 248/502 (49%), Gaps = 73/502 (14%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L C ++ LK +H QI+ + L+ + K++ +C GDL YA LLF Q+ +PN F+
Sbjct: 45 LLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFM 104
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
YN +IR Y+N++ ++ L++QM+ +P++FT PFV+K+CA +
Sbjct: 105 YNHLIRGYSNSNDPMKSLLLFRQMVSAGP-----MPNQFTFPFVLKACAAKPFYWEAVIV 159
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
HA K G+ H+ +NA+L Y C ++ A +VF++++DR IV+WN++I+GY+++G
Sbjct: 160 HAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFC 219
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
EA+ +F++M +G+E D ++VS+L A
Sbjct: 220 D-------------------------------EAILLFQEMLQLGVEADVFTLVSLLSAS 248
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
++ +L+LG ++H+Y + +++ NALI+MY KCG + A +FDQM+++DVVSW+
Sbjct: 249 SKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWT 308
Query: 320 TVIGGLANH-------------------------------GKAHKAIHLFHEMQRLKVPP 348
+++ AN G+ +A+ LFH M V P
Sbjct: 309 SMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMP 368
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+D T + +LS C++TG G + D+ I + L+D+ + G L A++I
Sbjct: 369 DDATLVSILSCCSNTGDLALGKQAHCYIC-DNIITVSVTLCNSLIDMYAKCGALQTAIDI 427
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPEDTGNYVLLSNIYAKHG 466
MP K + W ++ + + E A+ + + L P++ LLS H
Sbjct: 428 FFGMPEK-NVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSA--CSHS 484
Query: 467 RWEDVSRMRKLIRSKSMKKTPG 488
D+ R I + + +PG
Sbjct: 485 GLVDMGRYYFDIMISTFRISPG 506
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/494 (36%), Positives = 289/494 (58%), Gaps = 6/494 (1%)
Query: 33 IHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
+H LK+ ++QS + ++ + LA+A LF ++ + +V + ++ Y
Sbjct: 162 VHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARR- 220
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
GLA ++ R G L P++ TL V+ + + + G+ ++ +V G+
Sbjct: 221 --GLADEAWRVFCRMVVAGGL-QPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRS 277
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
ENAL+D++GK A +VF+ M +D+ +W +++ YA+ G ++ A LFD MP
Sbjct: 278 VNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPR 337
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI 271
VSW+ MI+ Y+ EA+ +F+ M G+EP +VSVL ACAQLG L+LG WI
Sbjct: 338 RNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWI 397
Query: 272 H-MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
+ Y + + NA I++Y KCG + AS+LF +M ER+VVSW+++I A HG+
Sbjct: 398 YDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQ 457
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+ + + LF +++ + P++ITF+GLLSAC+H+G +EG YF MK + IE K EHY
Sbjct: 458 SEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYA 517
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C++DLLG+ G L++A + + MPM+ D WG+LL++CR Y N+EI A + L+ L P
Sbjct: 518 CMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQLNPL 577
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
D+G YVL+S IYA +W+ V +R L+R + +KK PGCS IEV+ + EF+ D +
Sbjct: 578 DSGIYVLMSQIYASKNKWDQVKILRVLMRERGVKKNPGCSSIEVDGKFHEFLVADVSHVH 637
Query: 511 LKDIFWLLELLALH 524
+DI+ L+ + H
Sbjct: 638 SEDIYAALKNIYFH 651
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 195/447 (43%), Gaps = 75/447 (16%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKE 74
+ +L+SC + ++H + L+ F ++++ C ++ + +A+ + +
Sbjct: 40 LLALLESCASFPRFLQLHALLTVSGLAAHRFPASRLLAFCALSTPPRVDHAAAILARASA 99
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP-DKFTLPFVIKSCAGL--- 130
PN ++ M+RA+ L A L+++++R+ LP D TL F IK+ A
Sbjct: 100 PNAYMLATMMRAFLRARLPSRASALFRRVIRES------LPADARTLVFAIKAAASEHEH 153
Query: 131 LCPSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
PS G+ +H K+G + S+ NAL+ Y L A +F+EM DRD+V+W L
Sbjct: 154 HSPSGGEGVHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTL 213
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+ GYAR G +A +F +M +++G G++P+E
Sbjct: 214 VDGYARRGLADEAWRVFCRM----------VVAG--------------------GLQPNE 243
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+++V+V+ A Q+G L G ++ Y + R + NALI+M+ K GC A ++FD
Sbjct: 244 VTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDS 303
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK------------------------ 345
M +DV SW+T++ A G A LF +M R
Sbjct: 304 MAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLF 363
Query: 346 -------VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
V P + + +LSACA G + G +D+ + +D+ +
Sbjct: 364 KAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAK 423
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLL 425
G D A + EM + + W S++
Sbjct: 424 CGDFDAASKLFAEMAER-NVVSWNSMI 449
>gi|296082436|emb|CBI21441.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/433 (40%), Positives = 258/433 (59%), Gaps = 21/433 (4%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFV 123
A LF ++ +PNVF + A++ Y+ N L + Y +M L+ +LPDK+ P V
Sbjct: 416 AQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKG------VLPDKYVFPKV 469
Query: 124 IKSCAGLLCPSLGKQIHAHV----CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
++C LL +G Q+H V C+F L+ N+L+D+Y K ++ +VF+EM
Sbjct: 470 FRACGQLLWLEVGIQVHKDVVICGCEFDLQ----VCNSLIDMYSKSGDVGSGRRVFDEMV 525
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+RD+++WN++ISGY + +++ A +F+ M +V+W AMI G+ + AL+ F +
Sbjct: 526 ERDVLSWNSMISGYCK--RIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSK 583
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
MQ GI ++I+I +VLPAC L+ G+ +H Y KN + NALI MY KCGC
Sbjct: 584 MQRSGIMNNQITISTVLPAC----DLKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGC 639
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
I A +F M+ RD+VSW+T+IGG HG A+ L +M V PN +TF LSA
Sbjct: 640 IGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSA 699
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H+G +EG+ F +M RD +EH+ C+VDLL RA RL+ A+ IE+MP+KP
Sbjct: 700 CSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKH 759
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IW +LL++CR N+ +A +A E L LEPE GNYV LSNIYA+ GRW+D +RKL+
Sbjct: 760 IWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRKLME 819
Query: 480 SKSMKKTPGCSLI 492
+ + K G S I
Sbjct: 820 DRGLVKPSGYSWI 832
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 47/266 (17%)
Query: 13 LEDRFV--PILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
L D++V + ++C L+ L+ ++H ++ + +ID+ + GD+
Sbjct: 460 LPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRR 519
Query: 68 LFKQVKEPNVFLYNAMIRAYT---------------------NNHLYG--------LAIN 98
+F ++ E +V +N+MI Y N + G LA+
Sbjct: 520 VFDEMVERDVLSWNSMISGYCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALE 579
Query: 99 LYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENAL 158
+ +M R S I+ ++ T+ V+ +C GKQ+HA++ K S NAL
Sbjct: 580 CFSKMQR-----SGIMNNQITISTVLPACD----LKSGKQVHAYITKNSFSSVIPVWNAL 630
Query: 159 LDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI---- 214
+ +Y KC + A+ +F M RD+V+WN +I G+ G + A L M ++ +
Sbjct: 631 IHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNS 690
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQM 240
V++T+ +S +H G E +++F M
Sbjct: 691 VTFTSALSACSHSGLVDEGMELFHTM 716
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+ A LFD++ + +V +W+ ++G + +G + + + + EM+ V P+ F + AC
Sbjct: 414 SSAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRAC 473
Query: 361 AHTGFWNEGLMYFDSMKRDHHI---EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
+ G+ + +D I E ++ L+D+ ++G + + +EM ++ D
Sbjct: 474 GQLLWLEVGI----QVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEM-VERD 528
Query: 418 AKIWGSLLS 426
W S++S
Sbjct: 529 VLSWNSMIS 537
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 285/484 (58%), Gaps = 8/484 (1%)
Query: 20 ILQSCENLIELKKI---HTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L++C + + + H ++K F+ ++ S G L + F ++ + N
Sbjct: 116 LLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRN 175
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +N+MI Y A +L++ M R +L D+FTL ++ +C+ G
Sbjct: 176 VVSWNSMINGYAQAGNTREACSLFEGMRRQG-----LLADEFTLVSLLFACSAEGNLEFG 230
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K +H+H+ G + I NAL+D+YGKC +L+ AH F+ M ++ V+W +++ A+
Sbjct: 231 KLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKR 290
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+ AR F+++P +I+SW AMIS Y G + EALD++ +M+++G+ PDE ++ +VL
Sbjct: 291 ASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVL 350
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC QLG L G+ IH N + N+L++MY +CG ++ A LF +M ++V+
Sbjct: 351 SACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVI 410
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+ +IG LA HG+A A+ F M PP++ITF+ LLSAC H G G YF +M
Sbjct: 411 SWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAM 470
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ ++++ +EHY C+VDLLGR G+L +A+++I++MPM+PD +WG+LL +CR + +++I
Sbjct: 471 RHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQI 530
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
++ LL LE G +VL+SN+ + +WED+ R+RKL+R MKK G S IE N+
Sbjct: 531 GKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNS 590
Query: 497 EVQE 500
+ E
Sbjct: 591 NIHE 594
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 234/492 (47%), Gaps = 85/492 (17%)
Query: 6 GALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
GA S + + + +L+ C ++ L ++H ++ + + + +GG + YA
Sbjct: 8 GASSARHVRE----LLRRCGSVHRLNQLHAHLVVHGVDDVTSQILASYCALPAGGGVWYA 63
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF ++ +P+ F+YN++IRAY N+H A+ L + M+R ILP++FTLPF++K
Sbjct: 64 RQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRG-----ILPNEFTLPFLLK 118
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA + H V K G NALL Y L ++ + F+EM DR++V+
Sbjct: 119 ACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVS 178
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
WN++I+GYA+ G + EA +F M+ G+
Sbjct: 179 WNSMINGYAQAGNTR-------------------------------EACSLFEGMRRQGL 207
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT-----VICNALIEMYIKCG-- 298
DE ++VS+L AC+ G+LE G+ +H +HLL R ++ NAL++MY KCG
Sbjct: 208 LADEFTLVSLLFACSAEGNLEFGKLVH-----SHLLVRGCRIDLILANALVDMYGKCGDL 262
Query: 299 -----------------------------CINQASQLFDQMVERDVVSWSTVIGGLANHG 329
I+ A F+Q+ E+ ++SW+ +I G
Sbjct: 263 LMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGG 322
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+ H+A+ L++ M+ L + P++ T +LSAC G G M D ++ + H + +
Sbjct: 323 RFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALF 381
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL--VL 447
L+D+ R G++D A+++ EMP K + W +++ + + + A++ ++
Sbjct: 382 NSLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQDALMFFRSMVSDAF 440
Query: 448 EPEDTGNYVLLS 459
P++ LLS
Sbjct: 441 PPDEITFVALLS 452
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/483 (38%), Positives = 280/483 (57%), Gaps = 40/483 (8%)
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAIN---LYKQMLRDPRTGSLILPDKFTL 120
YA LF Q+ EP F YN++IRA ++ A + +Y++MLR GS LP+ FTL
Sbjct: 76 YARNLFDQIPEPTAFCYNSLIRALSSAAGVAPAADTVLVYRRMLR---AGS-PLPNSFTL 131
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
F +K+C+ + G+Q+H+ + GL+ + LL+LY KC+E+ A VF+ M
Sbjct: 132 AFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVG 191
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
DK + +W+AMI GY+ +G EAL +FR+M
Sbjct: 192 --------------------------DK----NLAAWSAMIGGYSRVGMVNEALGLFREM 221
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
Q + PDE+++VSV+ ACA+ G+L+LG W+H + D+ + + ALI+MY KCG I
Sbjct: 222 QAADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLI 281
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+A +FD M ERD +WS +I GLA HG A+ LF M LKV PN++TFIG+LSAC
Sbjct: 282 ERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSAC 341
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
AH+G NEG Y+ +M+ + I+ +E+YGC+VDL R+ LD+A + + M + P++ I
Sbjct: 342 AHSGLVNEGRRYWSTMQ-ELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVI 400
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
W +LL + + + +I A + LL LEP + NYVLLSN+YA + +W+ VS MRK ++
Sbjct: 401 WRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKE 460
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA--KDVIDIMYED 538
++ GCS IE+N + +FV DD+ P +K+I LL +A RA K + D
Sbjct: 461 NNVNVVAGCSSIEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGHKPWTAAVLHD 520
Query: 539 IGE 541
+GE
Sbjct: 521 VGE 523
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 13/236 (5%)
Query: 21 LQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK-QVKEPN 76
L++C L E +++H+Q + L S ++ T ++++ ++A A +F V + N
Sbjct: 135 LKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKN 194
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ ++AMI Y+ + A+ L+++M + + PD+ T+ VI +CA LG
Sbjct: 195 LAAWSAMIGGYSRVGMVNEALGLFREM-----QAADVNPDEVTMVSVISACAKAGALDLG 249
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ +HA + + G+ AL+D+Y KC + A VF+ M +RD AW+ +I G A
Sbjct: 250 RWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIH 309
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
G ++ A LF +M + V++ ++S H G E + MQ +GI+P
Sbjct: 310 GLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPS 365
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 306/526 (58%), Gaps = 17/526 (3%)
Query: 14 EDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F L +C L +LK +IH+ + + ++ + ++D+ + G + YA +F
Sbjct: 151 EYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFD 210
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + +N++I Y N A+ ++ +M++ + PD+ TL V+ +CA +
Sbjct: 211 EMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIK-----CGVEPDEVTLASVVSACATI 265
Query: 131 LCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
G+QIHA V K ++ I NALLD+Y KC+ + EA +F+ M R +V+ ++
Sbjct: 266 SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSM 325
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+SGYA+ ++K AR +F M +++W A+I+G T G EAL +FR ++ + P
Sbjct: 326 VSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTH 385
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-------RTVICNALIEMYIKCGCINQ 302
+ ++L ACA L L+LG H + K H R + N+LI+MY+KCG +
Sbjct: 386 YTFGNLLNACANLADLQLGRQAHSHVLK-HGFRFQYGEDSDVFVGNSLIDMYMKCGSVEN 444
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
++F M+E+D VSW+ +I G A +G +KA+ +F +M P+ +T IG+L AC+H
Sbjct: 445 GCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSH 504
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G +EG YF SM H + +HY C+VDLLGRAG L++A N+IEEM M+PDA +WG
Sbjct: 505 AGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWG 564
Query: 423 SLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
SLL++C+ + N+++ ++ LL ++PE++G YVLLSN+YA++ W++V R+RKL+R +
Sbjct: 565 SLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRG 624
Query: 483 MKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
+ K PGCS IE+ E+ F+ D K+I+ +L + +A
Sbjct: 625 VVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQA 670
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 173/337 (51%), Gaps = 1/337 (0%)
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
G L+ D ++ CA ++HA + K S + +N L+D+YGKC +
Sbjct: 12 GDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVD 71
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
A K+F+ M +R+I +WN++I + + G + A +F+KMP SW +MISG+ G
Sbjct: 72 VARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGR 131
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EAL F QM G +E S S L ACA L L+LG IH +++ L + +A
Sbjct: 132 FDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSA 191
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
L++MY KCG + A +FD+M R VSW+++I +G +A+ +F EM + V P+
Sbjct: 192 LVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPD 251
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
++T ++SACA EG + + + + L+D+ + R+++A I
Sbjct: 252 EVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIF 311
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
+ MP++ S++S S +++A +++V
Sbjct: 312 DMMPIRSVVS-ETSMVSGYAKASKVKVARYMFSNMMV 347
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 219/495 (44%), Gaps = 105/495 (21%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L C + + ++H I+K + F+ ++IDV G + A LF ++
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT------------------------ 109
E N+F +N++I A+T + A++++++M + +
Sbjct: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
Query: 110 --GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
G L ++++ + +CAGL LG QIH+ V + S +AL+D+Y KC
Sbjct: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+ A VF+EMT R V+WN+LI+ Y + G +
Sbjct: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVD--------------------------- 234
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
EAL +F +M G+EPDE+++ SV+ ACA + +++ G+ IH K R +I
Sbjct: 235 ----EALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLIL 290
Query: 288 -NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
NAL++MY KC IN+A +FD M R VVS ++++ G A K A ++F M V
Sbjct: 291 GNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDV 350
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
IT+ L++ C G E L+ F +KR+
Sbjct: 351 ----ITWNALIAGCTQNGENEEALILFRLLKRE--------------------------- 379
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL-----VLEPEDTGNYV--LLS 459
+ P +G+LL++C ++L++ A H+L ED+ +V L
Sbjct: 380 ------SVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLI 433
Query: 460 NIYAKHGRWEDVSRM 474
++Y K G E+ R+
Sbjct: 434 DMYMKCGSVENGCRV 448
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/480 (35%), Positives = 278/480 (57%), Gaps = 41/480 (8%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +IRA T + L+ A+ L+ M PR G PD +T P +KSC+ LG QI
Sbjct: 89 FNVLIRALTASSLHRDALVLFASM--RPR-GPACFPDHYTYPLALKSCSASKDLLLGLQI 145
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H+ V K L + ++ + +Y +C +A++VF+ M RD+V+WN +I+G+AR+G
Sbjct: 146 HSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLF 205
Query: 200 KKA--------------------------------------RMLFDKMPYTTIVSWTAMI 221
+A R +FD M + ++SW AM+
Sbjct: 206 DRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAML 265
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
+ Y + + +A+++F M+ +EPD I++ +VLP C +L + +G+ IH + ++
Sbjct: 266 AVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMC 325
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
++ NAL++MY CGC+ A ++FD M RDV+SW+++I HG +A+ LF +M
Sbjct: 326 PNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKM 385
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+ P+ I F+ +L+AC+H G +G YFDSM +HI K EHY C+VDLLGRAG
Sbjct: 386 LGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGC 445
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
+++A + I M ++P+ ++WG+LL +CR +SN++I ++A ++L L PE TG YVLLSN+
Sbjct: 446 INEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNM 505
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
YA+ GRW DV+ +R ++ +K +KK PG S++E+ ++V F GD P + I+ L+ L
Sbjct: 506 YARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDEL 565
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 156/364 (42%), Gaps = 73/364 (20%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
D+ + +F ++ + +NAM+ Y NN + A+ L+ M +D + PD TL
Sbjct: 242 DIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDE-----VEPDSITL 296
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
V+ C L S+GK+IH + + + + + ENAL+D+Y C L +A ++F+ M+
Sbjct: 297 ATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSA 356
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+++W ++IS Y + G ++A +D+F +M
Sbjct: 357 RDVISWTSIISAYGKHGHGREA-------------------------------VDLFEKM 385
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGE-WIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
G+EPD I+ V+VL AC+ G L G+ + + H++ + ++++ + GC
Sbjct: 386 LGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGC 445
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
IN+A M+ + PN+ + LL A
Sbjct: 446 INEAYDFITTML----------------------------------IEPNERVWGALLQA 471
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C + GL+ D++ + + +Y L ++ RAGR ++ M K K
Sbjct: 472 CRIHSNMDIGLVAADNLFS--LVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKK 529
Query: 420 IWGS 423
G+
Sbjct: 530 FPGT 533
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 95/233 (40%), Gaps = 33/233 (14%)
Query: 133 PSLGKQIHAHVCKFGLKSHSITENA---LLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
PSL + HA + SH +A L+ Y C L AH V E +
Sbjct: 29 PSL-RAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVLESSSP--------- 78
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE--P 247
D TT V + +I T + +AL +F M+ G P
Sbjct: 79 -----------------DGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFP 121
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D + L +C+ L LG IH K L R + ++ I MY +CG A ++F
Sbjct: 122 DHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVF 181
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP-PNDITFIGLLSA 359
D M RDVVSW+ +I G A G +AI +F + L+ P+ T G+L A
Sbjct: 182 DGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPA 234
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/475 (38%), Positives = 284/475 (59%), Gaps = 38/475 (8%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYN 81
C ++ +LK+IH Q++ N+ ++++ C + GDL+YA LF +EPN F++N
Sbjct: 38 CTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNSFMWN 97
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
+IRA+ ++ A+ LY M R ++P K T PF++K+C+ Q+H
Sbjct: 98 TLIRAHASSLNPSEALLLYVDMRRLD-----VIPGKHTFPFLLKACSNFQSLQSCIQVHT 152
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
HV KFGL + N L+ Y ++ A +VF+E+++R + W +ISGYA+
Sbjct: 153 HVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQ------ 206
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
Y + EAL++F QM + G+EP+ ++ SVL ACAQ
Sbjct: 207 --------NYCS-----------------NEALELFDQMIVEGLEPNGATLASVLSACAQ 241
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
G L+LGE IH++ ++ + ++ AL+ MY K G I A +LFD + ER+ +W+ +
Sbjct: 242 SGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDXISERNTATWNAM 301
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I GLA HG A +A+ F ++++ ++ PNDITF+G+LSAC H G + G F MKR +
Sbjct: 302 ICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFHLMKRVYG 361
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
IE KIEHYGC+VDLLGR G L +A +I+ M K D I G+LL SC+ + N+EIA +
Sbjct: 362 IEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLGSCKNHGNIEIAERVV 421
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ +LVLEP + G YV+LSN+YA+ GRWEDV R+RK+++S ++KKTPG SL++ +N
Sbjct: 422 KEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLVDSDN 476
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 281/501 (56%), Gaps = 14/501 (2%)
Query: 28 IELKKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+ IH +LK LL L T ++ + G +A LF ++ E + AM RA
Sbjct: 26 LSASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARA 85
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL----GKQIHAH 142
+ + AI ++ M+ D + PD + + +C G + GK IHA
Sbjct: 86 HVASGQAAQAIAVFGDMVADG-----VFPDNVAVAVALGACHGAGSWTARRNPGKMIHAL 140
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V G+ L+ +YG+ EL + +VF++M R + WN ++ YAR G++ A
Sbjct: 141 VVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTA 200
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM---QMVGIEPDEISIVSVLPAC 259
+F MP +VSW +++GY G EAL +FRQM + P+ ++ ++L AC
Sbjct: 201 YEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGAC 260
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERDVVSW 318
A G LE G W+H Y ++N + + LI+MY KCG I+ A Q+F++ ++D+ SW
Sbjct: 261 AGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSW 320
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+TVI GLA HG+ A+ +F MQ + P+D+T +G+L+ACAH G +EGL YF SM+
Sbjct: 321 TTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEA 380
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
I KIEHYGC++DLLGR GRL +A ++I MPM P+ IWG+ LS+C+ + N+E+
Sbjct: 381 KFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGK 440
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
IA E L L+P+D V+LS++YAK W ++R R+ + S +KKTPGCS IE+ EV
Sbjct: 441 IAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEV 500
Query: 499 QEFVSGDDTKPFLKDIFWLLE 519
EFV+G P +I +L+
Sbjct: 501 HEFVAGGSQHPQYAEICSVLQ 521
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 277/489 (56%), Gaps = 39/489 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN---SGGDLAYASLLFKQVKEPN 76
+L C +L ELK++ +K L ++TK I+ C+ + + +A LF Q+ +P+
Sbjct: 26 LLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPD 85
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ L+N M R Y A L+ Q+L S + PD +T P ++K+CA G
Sbjct: 86 IVLFNTMARGYARTDTPLRAFTLFTQILF-----SGLFPDDYTFPSLLKACASCKALEEG 140
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+Q+H K GL + L+++Y C+E
Sbjct: 141 RQLHCLAIKLGLSENVYVCPTLINMYTACNE----------------------------- 171
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
M AR +FDK+ +V++ AMI+GY EAL +FR++Q ++P +++++SVL
Sbjct: 172 --MDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVL 229
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
+CA LG+L+LG+W+H Y KN R + ALI+MY KCG ++ A +F+ M RD
Sbjct: 230 SSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQ 289
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+WS +I A HG KA+ LF EM++ P++ITF+GLL AC+HTG EG YF M
Sbjct: 290 AWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGM 349
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ + + I+HYGC+VDLLGRAGRL++A I +P++P +W +LLS+C ++ N+E+
Sbjct: 350 RDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVEL 409
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+E + L+ G+Y++LSN+ A+ GRWEDV+ +RKL+ + + K PGCS +EVNN
Sbjct: 410 GKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNN 469
Query: 497 EVQEFVSGD 505
V EF SGD
Sbjct: 470 VVHEFFSGD 478
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 285/484 (58%), Gaps = 8/484 (1%)
Query: 20 ILQSCENLIELKKI---HTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L++C + + + H ++K F+ ++ S G L + F ++ + N
Sbjct: 116 LLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRN 175
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +N+MI Y A +L++ M R +L D+FTL ++ +C+ G
Sbjct: 176 VVSWNSMINGYAQAGNTREACSLFEGMRRQG-----LLADEFTLVSLLFACSAEGNLEFG 230
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K +H+H+ G + I NAL+D+YGKC +L+ AH F+ M ++ V+W +++ A+
Sbjct: 231 KLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKR 290
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+ AR F+++P +I+SW AMIS Y G + EALD++ +M+++G+ PDE ++ +VL
Sbjct: 291 ASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVL 350
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC QLG L G+ IH N + N+L++MY +CG ++ A LF +M ++V+
Sbjct: 351 SACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVI 410
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+ +IG LA HG+A A+ F M PP++ITF+ LLSAC H G G YF +M
Sbjct: 411 SWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAM 470
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ ++++ +EHY C+VDLLGR G+L +A+++I++MPM+PD +WG+LL +CR + +++I
Sbjct: 471 RHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQI 530
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
++ LL LE G +VL+SN+ + +WED+ R+RKL+R MKK G S IE N+
Sbjct: 531 GKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNS 590
Query: 497 EVQE 500
+ E
Sbjct: 591 NIHE 594
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 234/492 (47%), Gaps = 85/492 (17%)
Query: 6 GALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
GA S + + + +L+ C ++ L ++H ++ + + + +GG + YA
Sbjct: 8 GASSARHVRE----LLRRCGSVHRLNQLHAHLVVHGVDDVTSQILASYCALPAGGGVWYA 63
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF ++ +P+ F+YN++IRAY N+H A+ L + M+R ILP++FTLPF++K
Sbjct: 64 RQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRG-----ILPNEFTLPFLLK 118
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA + H V K G NALL Y L ++ + F+EM DR++V+
Sbjct: 119 ACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVS 178
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
WN++I+GYA+ G + EA +F M+ G+
Sbjct: 179 WNSMINGYAQAGNTR-------------------------------EACSLFEGMRRQGL 207
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT-----VICNALIEMYIKCG-- 298
DE ++VS+L AC+ G+LE G+ +H +HLL R ++ NAL++MY KCG
Sbjct: 208 LADEFTLVSLLFACSAEGNLEFGKLVH-----SHLLVRGCRIDLILANALVDMYGKCGDL 262
Query: 299 -----------------------------CINQASQLFDQMVERDVVSWSTVIGGLANHG 329
I+ A F+Q+ E+ ++SW+ +I G
Sbjct: 263 LMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGG 322
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+ H+A+ L++ M+ L + P++ T +LSAC G G M D ++ + H + +
Sbjct: 323 RFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALF 381
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL--VL 447
L+D+ R G++D A+++ EMP K + W +++ + + + A++ ++
Sbjct: 382 NSLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQDALMFFRSMVFDAF 440
Query: 448 EPEDTGNYVLLS 459
P++ LLS
Sbjct: 441 PPDEITFVALLS 452
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 186/502 (37%), Positives = 303/502 (60%), Gaps = 24/502 (4%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG-------GDLAYASLLFKQVKEPNVFL 79
++E +K+H ++K S F VCNS G + A +F ++ E +V
Sbjct: 132 VVEGEKVHGYVVK-----SGFDAC----VCNSVMGMYGALGKMEVAKKVFDEIPERDVVS 182
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +I +Y + + AI ++++M R+ S + D+ T+ + +C+ L +G++I
Sbjct: 183 WNVLISSYVGHRKFEDAIAVFRRMRRE----SNLKADEATVVSTLSACSVLRNQEVGEEI 238
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H +V L+ + NALLD+Y KC + +A +F+EM +++++ W +++SGYA G +
Sbjct: 239 HRYV-DAELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSL 297
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
+AR LF++ P IV WTAMI+GY + EAL +FR+MQ+ + PD +V++L C
Sbjct: 298 DEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGC 357
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
AQ G+LE G+W+H Y +N + V+ AL+++Y KCGC+ +A ++F +M ERD SW+
Sbjct: 358 AQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMKERDTASWT 417
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+VI GLA +G KA+ F +M+ P+DITFIG+L+AC H G EG YFDSM +
Sbjct: 418 SVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSMTKT 477
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD---AKIWGSLLSSCRTYSNLEI 436
+ I+ K EHY CL+DLL RAG LD+A ++E +P++ ++ SLLS+CR Y NL++
Sbjct: 478 YKIQPKSEHYSCLIDLLCRAGLLDEAELLLEMIPIESSDIVVPLYCSLLSACRNYGNLKM 537
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ L +E +D+ + LL+++YA RWEDV+ +R+ ++ ++K PGCS IEVN
Sbjct: 538 SERVGRRLERVEVKDSSVHTLLASVYASANRWEDVTTVRRKMKELGIRKFPGCSSIEVNG 597
Query: 497 EVQEFVSGDDTKPFLKDIFWLL 518
+ EF+ G + + DI +L
Sbjct: 598 VLHEFMVGGPSHMEMDDIHSVL 619
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 219/447 (48%), Gaps = 85/447 (19%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN--SGGDLAYASLLFKQVKEP 75
V +LQSCE++ L +IH +I + L + +TK++ C S G + YA + V+ P
Sbjct: 20 VDLLQSCESMAHLTQIHAKIFRVGLQDNMDTLTKIVLFCTDPSRGSIRYAERVLGFVQSP 79
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+ +YN MI+A + + + L+ ++ + + PD FTLP V K+ L
Sbjct: 80 CLVMYNLMIKAVAKDENFRKVLVLFSELRKQG-----LNPDNFTLPPVFKAMGCLGKVVE 134
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+++H +V K G + N+++ +YG ++ A KVF+E+ +RD+V+WN LIS Y
Sbjct: 135 GEKVHGYVVKSGF--DACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSY-- 190
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEISIVS 254
+G K + +A+ VFR+M+ ++ DE ++VS
Sbjct: 191 VGHRK-----------------------------FEDAIAVFRRMRRESNLKADEATVVS 221
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
L AC+ L + E+GE IH Y D L T I NAL++MY KCGC+++A +FD+M ++
Sbjct: 222 TLSACSVLRNQEVGEEIHRYVDA-ELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKN 280
Query: 315 VVSWSTVIGGLANHGKA-------------------------------HKAIHLFHEMQR 343
V+ W++++ G A++G +A+ LF +MQ
Sbjct: 281 VICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQI 340
Query: 344 LKVPPNDITFIGLLSACAHTGF-----WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
++ P++ + LL CA TG W G ++ +S+ D + LVD+ +
Sbjct: 341 QRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTA------LVDVYAK 394
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLL 425
G +++AL + EM + D W S++
Sbjct: 395 CGCVEKALEVFYEMKER-DTASWTSVI 420
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 118/244 (48%), Gaps = 10/244 (4%)
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G ++ A + + +V + MI ++ + L +F +++ G+ PD ++ V
Sbjct: 64 GSIRYAERVLGFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVF 123
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
A LG + GE +H Y K+ +CN+++ MY G + A ++FD++ ERDVV
Sbjct: 124 KAMGCLGKVVEGEKVHGYVVKSGF--DACVCNSVMGMYGALGKMEVAKKVFDEIPERDVV 181
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQR-LKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
SW+ +I H K AI +F M+R + ++ T + LSAC+ G +
Sbjct: 182 SWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVG----EE 237
Query: 376 MKR--DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ R D +E + L+D+ + G +D+A I +EM K + W S++S + +
Sbjct: 238 IHRYVDAELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNK-NVICWTSMVSGYASNGS 296
Query: 434 LEIA 437
L+ A
Sbjct: 297 LDEA 300
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/500 (37%), Positives = 282/500 (56%), Gaps = 44/500 (8%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMID---VCNSGGDLAYASLLFKQVKEPNVFLYNAM 83
++ + +H K L N + T ++ VC+S G+ A +LF ++ E NV +N M
Sbjct: 200 ILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGN---ARVLFDEIPERNVVTWNVM 256
Query: 84 IRAYTNNHLY-------------------------------GLAINLYKQMLRDPRTGSL 112
+ Y+ + L G A+ +Y+ MLR TG
Sbjct: 257 LNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLR---TG-- 311
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
+ P++ + +I +C + S G+Q H + + G + + ++ Y C E+ A
Sbjct: 312 VGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAF 371
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
FE + + +WN LISG+ R G +++AR LFD+MP + SW++MISGY+
Sbjct: 372 LQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDL 431
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
AL +F +M G++P+EI++VSV A A LG+L G W H Y N + + ALI+
Sbjct: 432 ALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALID 491
Query: 293 MYIKCGCINQASQLFDQMVER--DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND 350
MY KCG I A QLF ++ +R V W+ +I GLA HG A+ ++ LF ++QR+++ PN
Sbjct: 492 MYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNS 551
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
ITFIG+LSAC H G + G YF MK ++IE I+HYGC++DLLGRAGRL +A +I
Sbjct: 552 ITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIR 611
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
+MPMK D IWG+LL++CRT+ N+EI A E+L L+ VLLSNIYA GRW+D
Sbjct: 612 KMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDD 671
Query: 471 VSRMRKLIRSKSMKKTPGCS 490
+R+ ++S+ MKK+PGCS
Sbjct: 672 AFLVRRAMQSQRMKKSPGCS 691
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 218/471 (46%), Gaps = 79/471 (16%)
Query: 11 KELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMI-------------- 53
+ E V L+SC +L+ L ++IH+ + K L + F+ +I
Sbjct: 49 SDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARS 108
Query: 54 --DVCN---------------SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
D C+ G L A LF+++ Y M+ N+ + A
Sbjct: 109 LFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEA 168
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKS---CAGLL-CPSLGKQIHAHVCKFGLKSHS 152
I ++K M R +I P++ TL VI + G+L C + +HA K GL++ +
Sbjct: 169 IGVFKDM----RFAGVI-PNEVTLASVISAYSHVGGILNC----RMLHALSFKLGLEALN 219
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
I L+ +Y C L A +F+E+ +R++V WN +++GY++ G + AR LF+++P
Sbjct: 220 IVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAK 279
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
+VSW +I GY I EAL ++R M G+ P+E+ IV ++ AC + ++ G+ H
Sbjct: 280 DVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFH 339
Query: 273 MYC-----DKNHLLRRTVI-----C---------------------NALIEMYIKCGCIN 301
D ++ T+I C NALI +++ G I
Sbjct: 340 GIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIE 399
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
QA QLFD+M ERDV SWS++I G + + + A+ LFHEM V PN+IT + + SA A
Sbjct: 400 QARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIA 459
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
G EG + + + I L+D+ + G + AL + E+
Sbjct: 460 TLGTLMEGRWAHEYI-LSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEI 509
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 196/427 (45%), Gaps = 84/427 (19%)
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
+ TL +KSC+ LL S G+QIH+ V K GL S+ +N+L+ Y KC + A +F+
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
+ D V+ N +++GY + G + AR LF+KMP VS+T M+ G + EA+ V
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLG-----------SLELG---------EWIHMYCD 276
F+ M+ G+ P+E+++ SV+ A + +G S +LG +HMYC
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCV 231
Query: 277 KNHL-----------LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+ L R V N ++ Y K G ++ A LF+++ +DVVSW T+I G
Sbjct: 232 CSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGY 291
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG---------------- 369
+ +A+ ++ M R V PN++ + L+SAC T +EG
Sbjct: 292 VQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYD 351
Query: 370 -------------------LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
+ F+ +DH + + L+ R G ++QA + +
Sbjct: 352 FIQATIIHFYAACGEINLAFLQFELGSKDH-----VSSWNALISGFVRNGMIEQARQLFD 406
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME--HLLV---LEPEDTGNYVLLSNIYA-- 463
EMP + D W S++S YS E +A++ H +V ++P + + S I
Sbjct: 407 EMPER-DVFSWSSMISG---YSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLG 462
Query: 464 --KHGRW 468
GRW
Sbjct: 463 TLMEGRW 469
>gi|357120906|ref|XP_003562165.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Brachypodium distachyon]
Length = 529
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 279/489 (57%), Gaps = 14/489 (2%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMID-VCNSGGDLAYASLLFKQVKEPNVFLYNA 82
C + L+++H ++K L++ ++++ + G D+AYA+ L + PN F++N
Sbjct: 46 CATMARLRQLHGALVKSGLAKDPIAASRVVAFLAGKGRDVAYAARLVRHHPRPNAFMWNT 105
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS----LGKQ 138
IRA ++ A+ L+ MLR P P++ T P + S A L + G
Sbjct: 106 AIRALSDGPGPDAAVALFLDMLRSPTP-----PERRTFPSLFASYARLGVRADDDGAGAA 160
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNNLISGYARLG 197
+H V K GL + N+++ +Y EA ++ + D+VA N+ I R G
Sbjct: 161 LHGMVLKLGLAGDAYVRNSMIAMYASWGRADEALLLYGQCGQAFDVVACNSAIVALTRAG 220
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
++ +AR +FD MP T+ +W+AM+S Y+ +A+++F MQ G+EP+ +VSVL
Sbjct: 221 RVDEAREVFDAMPARTVATWSAMVSAYSRAARCQDAVELFSAMQASGVEPNANVLVSVLG 280
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV- 316
CA LG+LE G W+H Y DK+ + ++ AL++MY KCG I++A +FD + +
Sbjct: 281 CCAALGALEQGAWVHAYIDKHGVAMNALVVTALVDMYCKCGSIHKARHVFDASRSQGLAK 340
Query: 317 --SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
SW+ ++ GLA HG+ +A+ LF E++ + P+++TFI +L A H+G +E F
Sbjct: 341 LSSWNAMMLGLAVHGQCQEALALFSELETYGLSPDNVTFITILMAYGHSGMADEAKALFS 400
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+M+R++ + IEHYGCLVD L RAGRL +A ++I MPM+PD IWG+LLS CR + +
Sbjct: 401 AMEREYAVTPGIEHYGCLVDALARAGRLGEAEDVIRTMPMRPDTAIWGALLSGCRLHGDA 460
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E A + +P+D+G YVL +++ A+ G +R+ +R + + K PGCS+IEV
Sbjct: 461 EAGARAASGAMECDPQDSGAYVLAASVLARDGEVGAGVSVRERMRVEGVAKVPGCSMIEV 520
Query: 495 NNEVQEFVS 503
N V EFVS
Sbjct: 521 NGVVHEFVS 529
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 292/532 (54%), Gaps = 10/532 (1%)
Query: 6 GALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
GA + + + V + CE L E + ++L + + T M+ GD+ A
Sbjct: 189 GAGGVLSVSNALVALYMKCEAL-EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAA 247
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F++V ++NAMI Y ++ + A L+++M+ + + D+FT V+
Sbjct: 248 RSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLE-----RVPLDEFTFTSVLS 302
Query: 126 SCAGLLCPSLGKQIHAHVCK----FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
+CA + GK +H + + F ++ NAL+ LY KC + A ++F+ M +
Sbjct: 303 ACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSK 362
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
D+V+WN ++SGY + KA +F++MPY +SW M+SGY H G +AL +F +M+
Sbjct: 363 DVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMR 422
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
++P + + + AC +LGSL+ G+ +H + + NALI MY +CG +
Sbjct: 423 AEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVK 482
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+A+ +F M D VSW+ +I L HG +A+ LF M + P+ I+F+ +L+AC
Sbjct: 483 EANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN 542
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H+G +EG YF+SMKRD I +HY L+DLLGRAGR+ +A ++I+ MP +P IW
Sbjct: 543 HSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIW 602
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
++LS CRT ++E+ A + L + P+ G Y+LLSN Y+ GRW D +R+RKL+R +
Sbjct: 603 EAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 662
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
+KK PGCS IE N+V FV GD P ++ LE++ + V D
Sbjct: 663 GVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPD 714
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 176/344 (51%), Gaps = 23/344 (6%)
Query: 49 VTKMIDVCNSGGDLAYASLLFKQVKEP--NVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
T ++ + G L A F V + + L+NA+I AY A+ +++ +L
Sbjct: 91 ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLA- 149
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLG----KQIHAHVCKFGLKSHSITENALLDLY 162
+GSL PD ++ ++ S AG L P++ Q+ V K G NAL+ LY
Sbjct: 150 --SGSL-RPDDYSFTALL-SAAGHL-PNISVRHCAQLQCSVLKSGAGGVLSVSNALVALY 204
Query: 163 GKCDEL---IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA 219
KC+ L +A KV +EM D+D + W ++ GY R G + AR +F+++ V W A
Sbjct: 205 MKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNA 264
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK-- 277
MISGY H G EA ++FR+M + + DE + SVL ACA G G+ +H +
Sbjct: 265 MISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQ 324
Query: 278 -NHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
N + + + NAL+ +Y KCG I A ++FD M +DVVSW+T++ G KA+
Sbjct: 325 PNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAV 384
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+F EM N+++++ ++S H GF + L F+ M+ +
Sbjct: 385 EVFEEMPY----KNELSWMVMVSGYVHGGFSEDALKLFNRMRAE 424
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 48/369 (13%)
Query: 158 LLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT--IV 215
L+ LY +L A +F D VA +L++ YA G++ A FD +P V
Sbjct: 65 LIHLYTLSGDLPAAATLFR--ADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTV 122
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSLELGEWIHMY 274
A+IS Y A A+ VFR + G + PD+ S ++L A L ++ + +
Sbjct: 123 LHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQ 182
Query: 275 CD--KNHLLRRTVICNALIEMYIKCGCI---NQASQLFDQMVERDVVSWST--------- 320
C K+ + NAL+ +Y+KC + A ++ D+M ++D ++W+T
Sbjct: 183 CSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRG 242
Query: 321 ----------------------VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+I G + G +A LF M +VP ++ TF +LS
Sbjct: 243 DVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLS 302
Query: 359 ACAHTGFWNEGLMYFDSMKR---DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
ACA+ GF+ G + R + E + LV L + G + A I + M K
Sbjct: 303 ACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSK 362
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
D W ++LS S L+ AV E + ++ +++++ + Y G ED ++
Sbjct: 363 -DVVSWNTILSGYVESSCLDKAVEVFEEMPY---KNELSWMVMVSGYVHGGFSEDALKLF 418
Query: 476 KLIRSKSMK 484
+R++ +K
Sbjct: 419 NRMRAEDVK 427
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 281/479 (58%), Gaps = 8/479 (1%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
+L K V + NVF +N++I + A+ + M R SL P++ T P I
Sbjct: 29 TTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSM----RKLSL-KPNRSTFPCAI 83
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
KSC+ LL G+Q H FG + +AL+D+Y KC EL +A +F+E++ R+IV
Sbjct: 84 KSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIV 143
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+W ++I+GY + +A +FD M ++SW ++I+ Y G E++++F +M G
Sbjct: 144 SWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDG 203
Query: 245 -IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
I + +++ +VL ACA GS LG+ IH K L + ++I+MY KCG + A
Sbjct: 204 EINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMA 263
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+ FD+M E++V SWS ++ G HG A +A+ +F+EM V PN ITF+ +L+AC+H
Sbjct: 264 RKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHA 323
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G EG +F +M + +E +EHYGC+VDLLGRAG L +A ++I+ M ++PD +WG+
Sbjct: 324 GLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGA 383
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL +CR + N+++ I+ L L+P++ G YVLLSNIYA GRWEDV RMR L+++ +
Sbjct: 384 LLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGL 443
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI--MYEDIG 540
K PG SL+++ V F+ GD P + I+ LE L++ V D+ + D+G
Sbjct: 444 VKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVG 502
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 169/396 (42%), Gaps = 70/396 (17%)
Query: 8 LSIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
LS+K F ++SC L++L ++ H Q L + F+ + ++D+ + G+L
Sbjct: 70 LSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRD 129
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLILP-------- 115
A LF ++ N+ + +MI Y N A+ ++ M RD + + I+
Sbjct: 130 ARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMS 189
Query: 116 ------------------DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENA 157
+ TL V+ +CA LGK IH V K GL+S+ +
Sbjct: 190 TESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS 249
Query: 158 LLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
++D+Y KC ++ A K F+ M ++++ +W+ +++GY G K
Sbjct: 250 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAK----------------- 292
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCD 276
EAL+VF +M M G++P+ I+ VSVL AC+ G LE G W
Sbjct: 293 --------------EALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSH 338
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER-DVVSWSTVIGGLANHGKAHKAI 335
+ + ++++ + G + +A L M R D V W ++G + HK +
Sbjct: 339 EFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC----RMHKNV 394
Query: 336 HLFHEMQR--LKVPPNDITFIGLLSAC-AHTGFWNE 368
L R ++ P + + LLS A G W +
Sbjct: 395 DLGEISARKLFELDPKNCGYYVLLSNIYADAGRWED 430
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 281/501 (56%), Gaps = 14/501 (2%)
Query: 28 IELKKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+ IH +LK LL L T ++ + G +A LF ++ E + AM RA
Sbjct: 26 LSASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARA 85
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL----GKQIHAH 142
+ + AI ++ M+ D + PD + + +C G + GK IHA
Sbjct: 86 HVASGQAAQAIAVFGDMVADG-----VFPDNVAVAVALGACHGAGSWTARRNPGKMIHAL 140
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V G+ L+ +YG+ EL + +VF++M R + WN ++ YAR G++ A
Sbjct: 141 VVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTA 200
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM---QMVGIEPDEISIVSVLPAC 259
+F MP +VSW +++GY G EAL +FRQM + P+ ++ ++L AC
Sbjct: 201 YEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGAC 260
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERDVVSW 318
A G LE G W+H Y ++N + + LI+MY KCG I+ A Q+F++ ++D+ SW
Sbjct: 261 AGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSW 320
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+TVI GLA HG+ A+ +F MQ + P+D+T +G+L+ACAH G +EGL YF SM+
Sbjct: 321 TTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEA 380
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
I KIEHYGC++DLLGR GRL +A ++I MPM P+ IWG+ LS+C+ + N+E+
Sbjct: 381 KFRITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGK 440
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
IA E L L+P+D V+LS++YAK W ++R R+ + S +KKTPGCS IE+ EV
Sbjct: 441 IAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEV 500
Query: 499 QEFVSGDDTKPFLKDIFWLLE 519
EFV+G P +I +L+
Sbjct: 501 HEFVAGGSQHPQYAEICSVLQ 521
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/448 (39%), Positives = 274/448 (61%), Gaps = 17/448 (3%)
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
MIR ++ + + LY +M+ P++FT F+I CA G+Q+H
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAE-----PNEFTYSFLIGGCARSRLLREGEQVHGR 55
Query: 143 VCKFGLKSHSITENALLDLY---GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
V G ++ +L++LY G D + +A +VF+E+ DR+IV+WN+L++GY R G +
Sbjct: 56 VVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDV 115
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
AR +FD+MP +VSWT MI+G IG +AL +F +M+ G++ D++++V+ L AC
Sbjct: 116 DGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSAC 175
Query: 260 AQLGSLELGEWIHMYCDKN-HLLRRTVIC---NALIEMYIKCGCINQASQLFDQMVERDV 315
A+LG L+LG WIH Y D+ H + ++ N+LI MY CG I++A ++F M +R
Sbjct: 176 AELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRST 235
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP---PNDITFIGLLSACAHTGFWNEGLMY 372
+SW+++I G A G A +A+ +F MQRL P+ ITFIG+L AC+H GF ++G +
Sbjct: 236 ISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHF 295
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F+ M + I +IEHYGC+VDLL RAG LD+A +IE MPMKP+ +WG+LL CR +
Sbjct: 296 FECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHK 355
Query: 433 NLEIAV-IAMEHLLVLEPEDTGNY-VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
N E+A +A + L L+P+ Y VLLSN+YA RW+DV+ +R+ + ++K G S
Sbjct: 356 NAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRS 415
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+++N V +FV+GD T ++ +L
Sbjct: 416 WVQINGVVHDFVAGDWTHKHASSVYEML 443
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 273/464 (58%), Gaps = 13/464 (2%)
Query: 60 GDLAYASLLFKQVK-----EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL 114
GD A L ++++ EPNV +N ++ + A+ M + L+
Sbjct: 99 GDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGE----GLLR 154
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
PD + + + + S+G+Q+H + K G ++ + AL+D+YGKC + E +V
Sbjct: 155 PDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRV 214
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLF----DKMPYTTIVSWTAMISGYTHIGSY 230
F+E + D+ + N LI+G +R Q+ +A LF D+ +VSWT++++ G
Sbjct: 215 FDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKD 274
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
EA++ FR+MQ G EP+ ++I VLPA A + +L G H + + L + +AL
Sbjct: 275 LEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSAL 334
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND 350
++MY KCG + A +FD MV R+VVSW+ +IGG A +G+A A+ +FH M + K P+
Sbjct: 335 VDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDM 394
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
+TF LL+AC G EG YF M ++ + ++EHY C+V LLGRAG+LD+A ++I
Sbjct: 395 VTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLIS 454
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
+MP +PDA IWGSLL SCR + N+++A +A E L LEPE+ GNYVLLSNIYA W+
Sbjct: 455 DMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDR 514
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
V+R+R++++ +KK GCS IE+ N+V ++GDD+ P + I
Sbjct: 515 VNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAI 558
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 114/302 (37%), Gaps = 73/302 (24%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
PD LP KSC L L + +HA GL
Sbjct: 18 PDPHLLPTAFKSCPTL---PLARALHAVAEVSGLA------------------------- 49
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT--TIVSWTAMISGYTHIGSYAE 232
RD ++L+ Y RLG AR LFD MP T+V W+A+++ + G
Sbjct: 50 ------RDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEG 103
Query: 233 ALDVFRQMQMVG-------------------------------------IEPDEISIVSV 255
A + +M+ G + PD +
Sbjct: 104 AWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCA 163
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L A +G + +G+ +H Y K + ALI+MY KCG + ++FD+ DV
Sbjct: 164 LSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDV 223
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
S + +I GL+ + + +A+ LF E V N +++ +++ C G E + +F
Sbjct: 224 ASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFRE 283
Query: 376 MK 377
M+
Sbjct: 284 MQ 285
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 35/252 (13%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+++H +K +VT +ID+ G A +F + +V NA+I + N
Sbjct: 177 QQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRN 236
Query: 91 HLYGLAINLYKQMLRDPRTGSLIL------------------------------PDKFTL 120
A+ L+K+ + +++ P+ T+
Sbjct: 237 AQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTI 296
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
P V+ + A + G+ H + G +AL+D+Y KC + +A +F+ M
Sbjct: 297 PCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVS 356
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKM----PYTTIVSWTAMISGYTHIGSYAEALDV 236
R++V+WN +I GYA G+ A +F M +V++T +++ T G E
Sbjct: 357 RNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHY 416
Query: 237 FRQMQ-MVGIEP 247
F++M G+ P
Sbjct: 417 FKEMHNEYGVSP 428
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
++ V PD + + +C +L L +H + + L R + ++L+ Y++ G
Sbjct: 11 LRHVSFPPDPHLLPTAFKSCP---TLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGT 67
Query: 300 INQASQLFDQM--VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR-LKVPPNDITFIGL 356
A LFD M +R VV WS ++ A G A A L EM+R V PN IT+ GL
Sbjct: 68 TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGL 127
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
+S +G + ++ +M + + C + +G G
Sbjct: 128 VSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVG 171
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+P + L+ + H L+ ++ + ++D+ G + A ++F + NV
Sbjct: 300 LPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNV 359
Query: 78 FLYNAMIRAYTNNHLYGLAIN---LYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+NAMI Y +YG A+N ++ ML+ + PD T ++ +C
Sbjct: 360 VSWNAMIGGYA---MYGEAVNAVWMFHSMLKCKQK-----PDMVTFTCLLAACTQAGLTE 411
Query: 135 LG----KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNL 189
G K++H ++G+ ++ L G+ +L EA+ + +M + D W +L
Sbjct: 412 EGRHYFKEMHN---EYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSL 468
Query: 190 ISGYARLGQMKKARMLFDKM 209
+ G + A + +K+
Sbjct: 469 LGSCRVHGNVDLAEVAAEKL 488
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 289/532 (54%), Gaps = 39/532 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
I++ C L+ ++K L+Q L+ + I C S L A Q++EPNVF+
Sbjct: 34 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFV 93
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
YNA+ + + ++ LY +MLRD + P +T ++K A G+ +
Sbjct: 94 YNALFKGFVTCSHPIRSLELYVRMLRDS-----VSPSSYTYSSLVK--ASSFASRFGESL 146
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW------------- 186
AH+ KFG H + L+D Y + EA KVF+EM +RD +AW
Sbjct: 147 QAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDM 206
Query: 187 ------------------NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
N LI+GY LG +++A LF++MP I+SWT MI GY+
Sbjct: 207 DSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNK 266
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
Y EA+ VF +M GI PDE+++ +V+ ACA LG LE+G+ +HMY +N + I +
Sbjct: 267 RYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGS 326
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY KCG + +A +F + ++++ W+++I GLA HG A +A+ +F +M+ V P
Sbjct: 327 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 386
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N +TF+ + +AC H G +EG + SM D+ I +EHYG +V L +AG + +AL +
Sbjct: 387 NAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALEL 446
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I M +P+A IWG+LL CR + NL IA IA L+VLEP ++G Y LL ++YA+ RW
Sbjct: 447 IGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW 506
Query: 469 EDVSRMRKLIRSKSMKKT-PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
DV+ +R +R ++K PG S I ++ F + D + ++ LL+
Sbjct: 507 RDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLD 558
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 177/489 (36%), Positives = 279/489 (57%), Gaps = 8/489 (1%)
Query: 29 ELKKIHTQ-ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
E++++H Q ++ LL+ + ++++ + +++YA +F+++ +VF+YN MIR
Sbjct: 3 EVRQLHAQFVVSGLLNHHSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGL 62
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLIL-PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
L Y +L L PD +T FV+K+C+ GKQ+H + K
Sbjct: 63 M------LGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKA 116
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
G+ ++ ++L+ +Y ++EA V E ++ + +A N++ISGY G + KAR +F
Sbjct: 117 GISPNTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMF 176
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
D+M + SW+A+I+G T G + EAL +F M + P+E ++VS+L ACA LG+L
Sbjct: 177 DQMKAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALH 236
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
G WIH Y D+ + ALI+MY KCG I + F +M RD+V+W +I G A
Sbjct: 237 QGRWIHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFA 296
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+G+A K LF EM + PN + F+ +LSAC+H G+ EG +YF+ M D I I
Sbjct: 297 IYGQAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSI 356
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
EHYGC+VDLLGRAGRL +A I MP KP++ IWGS+LS+CRT+++L A HL+
Sbjct: 357 EHYGCMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLIE 416
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
LEP Y L ++ G ++ +++RK+I + M+ T G S IEV+ + EF+ GD
Sbjct: 417 LEPRSGDRYKLAGLMFGNAGEKQEATKIRKMIEDQGMETTSGSSFIEVDGTIHEFLVGDT 476
Query: 507 TKPFLKDIF 515
+I+
Sbjct: 477 IHNEAAEIY 485
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 44/271 (16%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L++C N L E K++H QI+K +S + + + +I + S G + A + ++
Sbjct: 90 YTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSSLIHMYTSSGSIVEAECVLREFS 149
Query: 74 EPNVFLYNAMIRAY-------------------------------TNNHLYGLAINLYKQ 102
E N N+MI Y T N ++ A+ L++
Sbjct: 150 EENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALALFED 209
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M+ S LP++ L ++ +CA L G+ IHA++ + G AL+D+Y
Sbjct: 210 MMV-----SHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSIRLSTALIDMY 264
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM----PYTTIVSWT 218
KC ++ +K F +M RDIV W +ISG+A GQ KK LF++M Y V +
Sbjct: 265 AKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYGQAKKCFELFEEMLADGIYPNGVIFV 324
Query: 219 AMISGYTHIGSYAEALDVFRQMQM-VGIEPD 248
A++S +H G E F QM + +GI P
Sbjct: 325 AILSACSHAGYVEEGKLYFNQMMVDLGIRPS 355
>gi|186478293|ref|NP_172391.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099767|sp|O80488.1|PPR23_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09190
gi|3249103|gb|AAC24086.1| Contains similarity to membrane-associated salt-inducible protein
homolog TM021B04.10 gb|2191192 from A. thaliana BAC
gb|AF007271 [Arabidopsis thaliana]
gi|28393182|gb|AAO42022.1| unknown protein [Arabidopsis thaliana]
gi|332190289|gb|AEE28410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 484
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 287/483 (59%), Gaps = 7/483 (1%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
E+E + + +L L +IH +L++ L SN L+ I +C S + YA+ +F
Sbjct: 2 EIERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSH 61
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ PNV ++NAMI+ Y+ +++ + M I D++T ++KSC+ L
Sbjct: 62 IQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM-----KSRGIWADEYTYAPLLKSCSSLS 116
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
GK +H + + G +++LY + +A KVF+EM++R++V WN +I
Sbjct: 117 DLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIR 176
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G+ G +++ LF +M +IVSW +MIS + G EAL++F +M G +PDE +
Sbjct: 177 GFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEAT 236
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQM 310
+V+VLP A LG L+ G+WIH + + L + + + NAL++ Y K G + A+ +F +M
Sbjct: 237 VVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM 296
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEG 369
R+VVSW+T+I G A +GK I LF M + KV PN+ TF+G+L+ C++TG G
Sbjct: 297 QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERG 356
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
F M +E + EHYG +VDL+ R+GR+ +A ++ MP+ +A +WGSLLS+CR
Sbjct: 357 EELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACR 416
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
++ ++++A +A L+ +EP ++GNYVLLSN+YA+ GRW+DV ++R L++ ++K+ G
Sbjct: 417 SHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQ 476
Query: 490 SLI 492
S I
Sbjct: 477 STI 479
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 295/506 (58%), Gaps = 9/506 (1%)
Query: 18 VPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V ++ +C L +L+ K++ I + ++ +V+ ++D+ + A LF +
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA 299
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
N+ L NAM Y L A+ ++ M+ S + PD+ ++ I SC+ L
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMM-----DSGVRPDRISMLSAISSCSQLRNIL 354
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK H +V + G +S NAL+D+Y KC A ++F+ M+++ +V WN++++GY
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEPDEISIV 253
G++ A F+ MP IVSW +ISG + EA++VF MQ G+ D ++++
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+ AC LG+L+L +WI+ Y +KN + + L++M+ +CG A +F+ + R
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV +W+ IG +A G A +AI LF +M + P+ + F+G L+AC+H G +G F
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM + H + + HYGC+VDLLGRAG L++A+ +IE+MPM+P+ IW SLL++CR N
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A A E + VL PE TG+YVLLSN+YA GRW D++++R ++ K ++K PG S I+
Sbjct: 655 VEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
+ + EF SGD++ P + +I +L+
Sbjct: 715 IRGKTHEFTSGDESHPEMPNIEAMLD 740
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 197/416 (47%), Gaps = 53/416 (12%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMI-DVCNSGG--DLAYASLLFKQVKE-PN 76
L++C+ + ELK H + K L +TK++ C G L++A +F+ +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
F+YN++IR Y ++ L AI L+ +M+ S I PDK+T PF + +CA G
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMN-----SGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
QIH + K G +N+L+ Y +C EL A KVF+EM++R++V+W ++I GYAR
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
K A LF FR ++ + P+ +++V V+
Sbjct: 214 DFAKDAVDLF------------------------------FRMVRDEEVTPNSVTMVCVI 243
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA+L LE GE ++ + + + ++ +AL++MY+KC I+ A +LFD+ ++
Sbjct: 244 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG--FWNEGLMYFD 374
+ + G +A+ +F+ M V P+ I+ + +S+C+ W +
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC---- 359
Query: 375 SMKRDHHIEHKIEHY----GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + + E + L+D+ + R D A I + M K W S+++
Sbjct: 360 ---HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVA 411
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 300/521 (57%), Gaps = 9/521 (1%)
Query: 18 VPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V ++ +C L +L+ K++ I + ++ +V+ ++D+ + A LF +
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA 299
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
N+ L NAM Y L A+ ++ M+ S + PD+ ++ I SC+ L
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMM-----DSGVRPDRISMLSAISSCSQLRNIL 354
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK H +V + G +S NAL+D+Y KC A ++F+ M+++ +V WN++++GY
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEPDEISIV 253
G++ A F+ MP IVSW +ISG + EA++VF MQ G+ D ++++
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+ AC LG+L+L +WI+ Y +KN + + L++M+ +CG A +F+ + R
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV +W+ IG +A G A +AI LF +M + P+ + F+G L+AC+H G +G F
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM + H + + HYGC+VDLLGRAG L++A+ +IE+MPM+P+ IW SLL++CR N
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A A E + VL PE TG+YVLLSN+YA GRW D++++R ++ K ++K PG S I+
Sbjct: 655 VEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI 534
+ + EF SGD++ P + +I +L+ ++ V D+
Sbjct: 715 IRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 755
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 197/416 (47%), Gaps = 53/416 (12%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMI-DVCNSGG--DLAYASLLFKQVKE-PN 76
L++C+ + ELK H + K L +TK++ C G L++A +F+ +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
F+YN++IR Y ++ L AI L+ +M+ S I PDK+T PF + +CA G
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMN-----SGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
QIH + K G +N+L+ Y +C EL A KVF+EM++R++V+W ++I GYAR
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
K A LF FR ++ + P+ +++V V+
Sbjct: 214 DFAKDAVDLF------------------------------FRMVRDEEVTPNSVTMVCVI 243
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA+L LE GE ++ + + + ++ +AL++MY+KC I+ A +LFD+ ++
Sbjct: 244 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG--FWNEGLMYFD 374
+ + G +A+ +F+ M V P+ I+ + +S+C+ W +
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC---- 359
Query: 375 SMKRDHHIEHKIEHY----GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + + E + L+D+ + R D A I + M K W S+++
Sbjct: 360 ---HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVA 411
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/388 (44%), Positives = 249/388 (64%), Gaps = 2/388 (0%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
N +L Y E+ EA KVF+ M+ RD+V+WN +I GYA G + AR +FD
Sbjct: 120 NVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAF 179
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
SW++MIS Y EAL+++R+M++ G+ PD IS+VSVL AC+ +G+L +G +H +
Sbjct: 180 SWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFV 239
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
+ N + + AL++MY KCG I + ++F M +DV++WS++I GLANHG H A+
Sbjct: 240 ESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDAL 299
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
LF EM + PN+ITFIG+L AC H G N+G YF SM H + ++EHYGC+VDL
Sbjct: 300 SLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDL 359
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGRAG +++A+ +I M KPD IW +LL +CR + N+EIA AM L VL+P G+Y
Sbjct: 360 LGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHY 419
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
VLLSNIYA+ WE V+ MRK IR +++++ PG S IE N V EFVSGD + P +++I+
Sbjct: 420 VLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIY 479
Query: 516 WLLELL--ALHQDRAKDVIDIMYEDIGE 541
+LE + L Q + + ++ +DI E
Sbjct: 480 KMLEEMMDRLRQAGYRPMTSLVLQDIDE 507
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 168/416 (40%), Gaps = 101/416 (24%)
Query: 33 IHTQILKYLLSQSN-FLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT- 88
+H + L+ + ++ F+ T ++++ + G++A A F + +VFL N M+ AY
Sbjct: 69 LHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVA 128
Query: 89 ----------------------NNHLYGLAINLYKQMLRDPRTGSL-------------- 112
N ++G A+ M R+ G+
Sbjct: 129 RGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAY 188
Query: 113 --------------------ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
+ PD ++ V+ +C+ + ++G ++H V ++
Sbjct: 189 AKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDM 248
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
AL+D+Y KC ++ + KVF M +D++ W+++I G A
Sbjct: 249 KLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLAN----------------- 291
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWI 271
G H +AL +F +M G++P+EI+ + VL AC +G + G ++
Sbjct: 292 ---------HGLGH-----DALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYF 337
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER-DVVSWSTVIGGLANHGK 330
D + ++ R ++++ + G + +A +L M + D + W T++G +
Sbjct: 338 SSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGAC----R 393
Query: 331 AHKAIHLFHE-MQRLKV--PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
HK + + E M +LKV P D ++ L + A W EG+ R +I+
Sbjct: 394 IHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSW-EGVAEMRKTIRRENIQ 448
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 193/502 (38%), Positives = 290/502 (57%), Gaps = 21/502 (4%)
Query: 33 IHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
IH + K LL + L T ++ + G +A LF ++ +P + AM RA+ +
Sbjct: 33 IHGLLFKEGLLHAGSHLPTALLSAYAALGRPRHARDLFDEMPDPGLVTRTAMARAHAASG 92
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC-PSL---------GKQIHA 141
A+ ++ ML D +LPD L + +C G P+ GK +HA
Sbjct: 93 QTAQALAVFGDMLADG-----VLPDNVALAVALAACHGTGSFPAALGMAAARRPGKMVHA 147
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
+ G+ L+ LYG+ EL+ + ++F+ M + V+WN ++ Y R +
Sbjct: 148 LIVTSGIVPDVFVSTELIRLYGEYGELLVSRRLFDAMPVKSTVSWNAMVHQYIRHSNVGD 207
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM---QMVGIEPDEISIVSVLPA 258
A LF MP +VSW +I+GY IG + EAL++FRQM + P+ +I +VL A
Sbjct: 208 AYELFLAMPKRDVVSWNTIIAGYCLIGRFMEALELFRQMMSPSSCPVHPNGPTISTVLAA 267
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERDVVS 317
CA G LE G W+H Y D+N + + +LI+MY KCG I +A Q+F++ +RD+ S
Sbjct: 268 CAGAGCLETGIWVHAYIDRNRMNDDGSLDRSLIDMYAKCGSIEKALQVFEKAPGKRDLYS 327
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+TVI GLA HGKA A+ +F MQ + P+D+T +G+L+ACAH G +EGL +F S++
Sbjct: 328 WTTVICGLAMHGKAADALRMFGMMQDNGIRPDDVTLVGVLNACAHGGLVDEGLHHFYSLE 387
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ + I KIEHYGC++DLLGR GRL +A +II M MKP+A IWG+ L++C+ +SN+E+
Sbjct: 388 K-YAITPKIEHYGCVIDLLGRVGRLQEAYSIIRTMRMKPNAVIWGAFLNACKVHSNVELG 446
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
IA L L+P+D V+LS++YAK W ++R R+ + S MKKTPGCS IE++ E
Sbjct: 447 EIAAAELTRLDPDDPWAKVMLSSLYAKAQDWSSLARERREMNSLQMKKTPGCSSIELDGE 506
Query: 498 VQEFVSGDDTKPFLKDIFWLLE 519
V EFV+G P +I +LE
Sbjct: 507 VHEFVAGSFQHPQHGEICTVLE 528
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 301/522 (57%), Gaps = 23/522 (4%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLS---QSNFLVT-KMIDVCNSGGDLAYASLLFKQV 72
F + ++C L + + + Y+LS + N V ++D+ G + A F+++
Sbjct: 114 FPKVFKACSELKNYR-VGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 172
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ +VF++N M+ YT+ + A+N++++M+ + + P+ T+ + +C L
Sbjct: 173 EFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEG-----VKPNSITIASAVSACTNLSL 227
Query: 133 PSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL-- 189
G++IH + K L S + N+L+D Y KC + A + F + D+V+WN +
Sbjct: 228 LRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLA 287
Query: 190 ISGYARLGQMKKA-----RM-----LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
++G+ + G K A RM +F ++ +V W ++IS G ALD+ R+
Sbjct: 288 VTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLRE 347
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M + +E + +++VS LPAC++L +L G+ IH + + L I N+LI+MY +CG
Sbjct: 348 MNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGS 407
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
I ++ ++FD M +RD+VSW+ +I HG A++LF + + + + PN ITF LLSA
Sbjct: 408 IQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSA 467
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H+G EG YF MK ++ ++ +E Y C+VDLL RAG+ ++ L IE+MP +P+A
Sbjct: 468 CSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAA 527
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
+WGSLL +CR + N ++A A +L LEP+ +GNYVL++NIY+ GRWED +++R L++
Sbjct: 528 VWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMK 587
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+ + K PGCS IEV ++ FV GD + P ++ I +E L
Sbjct: 588 ERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESL 629
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 199/463 (42%), Gaps = 97/463 (20%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ ILQ C L L+ ++H Q++ + FL +++++V G + A +F ++
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E NVF + A++ Y Y I L+ M+ + + PD F P V K+C+ L
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG-----VRPDHFVFPKVFKACSELKNY 127
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+GK ++ ++ G + +S + ++LD++ KC + A + FEE+ +D+ WN ++SGY
Sbjct: 128 RVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGY 187
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G+ KK AL+VFR+M + G++P+ I+I
Sbjct: 188 TSKGEFKK-------------------------------ALNVFRKMVLEGVKPNSITIA 216
Query: 254 SVLPACAQLGSLELGEWIHMYCDK-NHLLRRTVICNALIEMYIKC----------GCINQ 302
S + AC L L G IH YC K L ++ N+L++ Y KC G I Q
Sbjct: 217 SAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQ 276
Query: 303 ---------------------------------ASQLFDQMVERDVVSWSTVIGGLANHG 329
A +F ++ RDVV W+++I A G
Sbjct: 277 TDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSG 336
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
++ A+ L EM V N +T + L AC+ +G K H +
Sbjct: 337 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG-------KEIHQFIIRCGLD 389
Query: 390 GC------LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
C L+D+ GR G + ++ I + MP + D W ++S
Sbjct: 390 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMIS 431
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 296/520 (56%), Gaps = 38/520 (7%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
D F+ L C N+ ++K++H Q+ + + K++ +C DL A LLF +++E
Sbjct: 4 DFFISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEE 63
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+ ++ MI + N Y +++++R GS PD F+LPFVIK+C +
Sbjct: 64 RDPVSWSVMIGGFVKNGDYERCFQTFRELIR---AGSK--PDNFSLPFVIKACRDTMGLI 118
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
+G+ IH+ V K GL + + L+D+Y KC
Sbjct: 119 MGRLIHSTVLKNGLHLDNFVCSTLVDMYAKC----------------------------- 149
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
G + A+ LFD+MP +V+ T MI+GY G E+ +F QM+ G PD++++V+
Sbjct: 150 --GMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVT 207
Query: 255 VLPACAQLGSLELGEWIHMY-CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
++ ACA+LG++ +H Y C + + L + A+I+MY KCG I+ + ++FD+M ++
Sbjct: 208 IVNACAKLGAMNKARLVHDYVCARRYSLD-VELGTAMIDMYAKCGSIDSSREIFDRMEQK 266
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+V+SWS +IG HG+ +A+ LFH M + PN ITFI LL AC+H G ++GL F
Sbjct: 267 NVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLF 326
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M + + ++HY C+VDLLGRAGRLDQAL +IE M ++ D IW + L +CR +
Sbjct: 327 SLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQ 386
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+++A A + LL L+ ++ G+Y+LLSNIYA GRW+DV+++R L+ + +KK PG + IE
Sbjct: 387 VDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIE 446
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
V+N + F +GD++ +I+ +L+ L+ + A V D
Sbjct: 447 VDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPD 486
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 188/505 (37%), Positives = 283/505 (56%), Gaps = 41/505 (8%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C L L K IH+ LK + F+ +I +S G + A +F +
Sbjct: 130 FPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLP 189
Query: 74 E--PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+V +N+MI Y +H Y LA+ ++ ++L D GSL PD+ TL + C L
Sbjct: 190 ALVRDVVSWNSMISGYLQSHRYELALKVFWELLGD---GSLS-PDEVTLVSALSVCGRLG 245
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
LGK+IH G ++L+D+Y KC
Sbjct: 246 LLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKC-------------------------- 279
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GQ++ AR +FD++P+ V WT+MI+GY + EA+++FR+MQ+ G D +
Sbjct: 280 -----GQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAAT 334
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
I VL AC G+L G WIH+YC++N + NALI MY KCG I +A ++F +
Sbjct: 335 IACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLT 394
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGL 370
+ D+ SWS VI GLA +G++ KA+HLF +M+ + + PN+ITF+G+L AC H GF ++GL
Sbjct: 395 QPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGL 454
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
YF++M + +++ IEHYGC+VDLLGRA L +A I +P++PD IW SLL +CR
Sbjct: 455 YYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRN 514
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ N+E+A A + + LEP G VLLSN+YA RW DV R+RK + ++ +KK PGCS
Sbjct: 515 HGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCS 574
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIF 515
+E++ V E D + P + I+
Sbjct: 575 FVEIDGLVHELFVADRSHPEMGAIY 599
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 15/233 (6%)
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
+R LF ++ + SW M Y+ AE + ++ M G PD S VL ACA+
Sbjct: 80 SRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACAR 139
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM--VERDVVSWS 319
L L G IH K + + NALI + CG + A +FD + + RDVVSW+
Sbjct: 140 LSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWN 199
Query: 320 TVIGGLANHGKAHKAIHLFHE-MQRLKVPPNDITFIGLLSACAHTGFWN-----EGLMYF 373
++I G + A+ +F E + + P+++T + LS C G + GL
Sbjct: 200 SMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTG 259
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
D + L+D+ + G+++ A + + +P + + W S+++
Sbjct: 260 SGFVLDVFVGSS------LIDMYSKCGQIEDARKVFDRIPHR-NTVCWTSMIA 305
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 287/497 (57%), Gaps = 9/497 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ L +C L L K++H ++++ L ++ + +I++ G A +F ++
Sbjct: 263 YTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 322
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ N + +I + ++ L+ QM L+ D+F L +I C +
Sbjct: 323 DRNSVSWTVLIGGSLQYECFSKSVELFNQM-----RAELMAIDQFALATLISGCFNRMDL 377
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+Q+H+ K G + N+L+ LY KC +L A VF M++RDIV+W ++I+ Y
Sbjct: 378 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 437
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISI 252
+++G + KAR FD M ++W AM+ Y G+ + L ++ M + PD ++
Sbjct: 438 SQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 497
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V++ CA +G+ +LG+ I + K L+ + NA I MY KCG I++A +LFD +
Sbjct: 498 VTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNG 557
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+DVVSW+ +I G + HG +A F +M P+ I+++ +LS C+H+G EG +Y
Sbjct: 558 KDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLY 617
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
FD M R H I +EH+ C+VDLLGRAG L +A ++I++MPMKP A++WG+LLS+C+ +
Sbjct: 618 FDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHG 677
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N E+A +A +H+ L+ D+G+Y+LL+ IY+ G+ +D +++RKL+R K +KK PG S +
Sbjct: 678 NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWM 737
Query: 493 EVNNEVQEFVSGDDTKP 509
EV N+V F + D + P
Sbjct: 738 EVENKVHVFKADDVSHP 754
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 212/466 (45%), Gaps = 10/466 (2%)
Query: 21 LQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK-QVKEPN 76
L+SC + L + +H +++ L+ + FL ++ S G L+ A L + +KEPN
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
V +N M+ Y A L+ +M RD + + ++ D SC L C L
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
Q+ KF E AL+D++ +C + A ++F ++ I N++++GYA+
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK 206
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
L + A F+ M +VSW MI+ + G EAL + +M G+ D + S
Sbjct: 207 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 266
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L ACA+L SL G+ +H ++ + +ALIE+Y KCG +A ++F+ + +R+
Sbjct: 267 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 326
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSW+ +IGG + K++ LF++M+ + + L+S C + G
Sbjct: 327 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 386
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
+ H I L+ L + G L A + M + D W S++++ YS +
Sbjct: 387 CLKSGH-NRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER-DIVSWTSMITA---YSQIG 441
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
+ A E + + + + Y +HG ED +M + S+
Sbjct: 442 NIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/544 (34%), Positives = 307/544 (56%), Gaps = 46/544 (8%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYA 65
L++K+ E ++ +++ C++L E K++H QILK+ L +F + ++ C + + YA
Sbjct: 26 LNLKQKEQEYLCLVKKCKSLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYA 85
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F+Q+ EP F +N MIR Y NN + AI LY ML+ + PD FT P V+K
Sbjct: 86 CSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQRE-----VEPDNFTYPVVLK 140
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA L G QIH HV K GL+ +N+L+++YGKC RDI
Sbjct: 141 ACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKC---------------RDI-- 183
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
+M A +F +M ++ SW+A+I+ + + + E L +F M G
Sbjct: 184 ------------EMSCA--IFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGC 229
Query: 246 EPDEISI-VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
E SI V+VL AC LG+ LG H KN + +L++MY+KCG + +
Sbjct: 230 WRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGL 289
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
LF M ++ +S+S +I GL HG +A+ +F EM + P+D+T++ +LSAC+H+G
Sbjct: 290 CLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSG 349
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+EGL FD MK ++ IE ++HYGC+VDL GRAG L++A +++ MP+K + +W SL
Sbjct: 350 LVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSL 409
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LS+C+ + NL++ IA E+L L + +Y++LSN+YA+ +WE+ +++R + ++ +
Sbjct: 410 LSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRTKMINRGLI 469
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF-------WLLELLALHQDRAKDVIDIMYE 537
+TPG SL+EV ++V +FVS D + +I+ W L D ++ ++D+ E
Sbjct: 470 QTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTSQVMLDVDEE 529
Query: 538 DIGE 541
+ GE
Sbjct: 530 EKGE 533
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 287/497 (57%), Gaps = 9/497 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ L +C L L K++H ++++ L ++ + +I++ G A +F ++
Sbjct: 273 YTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 332
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ N + +I + ++ L+ QM L+ D+F L +I C +
Sbjct: 333 DRNSVSWTVLIGGSLQYECFSKSVELFNQM-----RAELMAIDQFALATLISGCFNRMDL 387
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+Q+H+ K G + N+L+ LY KC +L A VF M++RDIV+W ++I+ Y
Sbjct: 388 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 447
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISI 252
+++G + KAR FD M ++W AM+ Y G+ + L ++ M + PD ++
Sbjct: 448 SQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 507
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V++ CA +G+ +LG+ I + K L+ + NA I MY KCG I++A +LFD +
Sbjct: 508 VTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNG 567
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+DVVSW+ +I G + HG +A F +M P+ I+++ +LS C+H+G EG +Y
Sbjct: 568 KDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLY 627
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
FD M R H I +EH+ C+VDLLGRAG L +A ++I++MPMKP A++WG+LLS+C+ +
Sbjct: 628 FDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHG 687
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N E+A +A +H+ L+ D+G+Y+LL+ IY+ G+ +D +++RKL+R K +KK PG S +
Sbjct: 688 NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWM 747
Query: 493 EVNNEVQEFVSGDDTKP 509
EV N+V F + D + P
Sbjct: 748 EVENKVHVFKADDVSHP 764
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 217/493 (44%), Gaps = 38/493 (7%)
Query: 21 LQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK-QVKEPN 76
L+SC + L + +H +++ L+ + FL ++ S G L+ A L + +KEPN
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDP----------------------------R 108
V +N M+ Y A L+ +M R R
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 109 TGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL 168
+G LP+ FT V+KSC L C L Q+ KF E AL+D++ +C +
Sbjct: 131 SGD-SLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A ++F ++ I N++++GYA+L + A F+ M +VSW MI+ + G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
EAL + +M G+ D + S L ACA+L SL G+ +H ++ + +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
ALIE+Y KCG +A ++F+ + +R+ VSW+ +IGG + K++ LF++M+ +
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ L+S C + G + H I L+ L + G L A +
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGH-NRAIVVSNSLISLYAKCGDLQNAEFV 428
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
M + D W S++++ YS + + A E + + + + Y +HG
Sbjct: 429 FSSMSER-DIVSWTSMITA---YSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAE 484
Query: 469 EDVSRMRKLIRSK 481
ED +M + S+
Sbjct: 485 EDGLKMYSAMLSQ 497
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 194/553 (35%), Positives = 304/553 (54%), Gaps = 60/553 (10%)
Query: 19 PIL---QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVK 73
PIL +SC ++++LK+I + K L F V++++ C + GD+ +A LLF Q++
Sbjct: 52 PILLAMESCTSMLQLKQIQAHMTKTALISHTFPVSRVLAFCALSDSGDINHAHLLFSQLQ 111
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
PN +++N MIR Y+ + + QM++ + D + F +K+C L
Sbjct: 112 NPNTYIWNTMIRGYSKAKMGQTGFLFFCQMVQKG-----VEMDCRSFVFALKACEQFLGV 166
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK +H V K G + +N L+ YG L A VF+E+++RD+V+W ++I GY
Sbjct: 167 LEGKSVHCVVWKMGFVYTLLVQNGLVHFYGLRGCLGLARLVFDEISERDVVSWTSMIDGY 226
Query: 194 ARLGQMKKARMLFDKMPYTTIVS------------------------------------- 216
++ +A LFD M +V
Sbjct: 227 SKHKWCDEALKLFDSMLMYGVVEPNEVTMIAVLSSCSQKGDLILGKTFLEYVKTRNVTRS 286
Query: 217 ---WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
A++ Y G A ++F M P E ++ VLP C QLG L++G+WIH
Sbjct: 287 LNLMNAILDMYVKCGCLDSAREIFDTMG-AAFAPMENTLACVLPVCGQLGCLDVGQWIH- 344
Query: 274 YCDKNHLLRR-----TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+N++ R ++ NALI+MY KCG I++A+++F+ M ER++VSW+++I A+H
Sbjct: 345 ---RNYVRMRYNEISVILANALIDMYAKCGVIHEAAKVFNDMPERNLVSWNSMITAYASH 401
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G A +A+ +F M P+DIT +G+LSAC+H G EG YF +MKR + IE K EH
Sbjct: 402 GHAKQALSVFERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYFQNMKRKYGIEPKNEH 461
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
Y C++DLLGR G L+ A +I +MPM+P A WG+L+ +CR + N+E+A IA LL L+
Sbjct: 462 YACMIDLLGRVGLLEDAYELITKMPMEPSAAAWGALVHACRMHGNVEVAKIAAPRLLELD 521
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
PED+G YVLL+NI A RW DV R+++R + +KK PG S++EV + EF++GD++
Sbjct: 522 PEDSGIYVLLANICASGRRWGDVKMARRMMRERRVKKIPGRSIVEVEGQFHEFLAGDESH 581
Query: 509 PFLKDIFWLLELL 521
P + I+ L+ L
Sbjct: 582 PQSEGIYNALDQL 594
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/474 (37%), Positives = 285/474 (60%), Gaps = 42/474 (8%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L YA LF ++ +P+V + N ++R + ++LY +M + + PD++T
Sbjct: 26 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRG-----VSPDRYT 80
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
FV+K+C+ L S G H V + G + +NAL+ + C +L A ++F++
Sbjct: 81 FTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSA 140
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT-------------------------- 213
VAW+++ SGYA+ G++ +A LFD+MPY
Sbjct: 141 KAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDR 200
Query: 214 -----IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+V+W AMISGY + G EAL +F++M+ G PD ++I+S+L ACA LG LE G
Sbjct: 201 FTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETG 260
Query: 269 EWIHMYCDKNHLLRRTV-----ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
+ +H+Y + + ++ I NALI+MY KCG I++A ++F + +RD+ +W+T+I
Sbjct: 261 KRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIV 320
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
GLA H A +I +F EMQRLKV PN++TFIG++ AC+H+G +EG YF M+ ++IE
Sbjct: 321 GLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIE 379
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
I+HYGC+VD+LGRAG+L++A +E M ++P+A +W +LL +C+ Y N+E+ A E
Sbjct: 380 PNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEK 439
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
LL + +++G+YVLLSNIYA G+W+ V ++RK+ +KK G SLIE +++
Sbjct: 440 LLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDD 493
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 145/324 (44%), Gaps = 47/324 (14%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI C ++ A LF + E +V +NAMI Y N A+ ++K+M RD
Sbjct: 181 MITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEM-RDAGEH- 238
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI-----TENALLDLYGKCD 166
PD T+ ++ +CA L GK++H ++ + S SI NAL+D+Y KC
Sbjct: 239 ---PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCG 295
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ A +VF + DRD+ WN LI G A
Sbjct: 296 SIDRAIEVFRGVKDRDLSTWNTLIVGLAL------------------------------- 324
Query: 227 IGSYAE-ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRT 284
+AE ++++F +MQ + + P+E++ + V+ AC+ G ++ G ++ + D ++
Sbjct: 325 --HHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 382
Query: 285 VICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+++M + G + +A + M +E + + W T++G +G + ++
Sbjct: 383 KHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 442
Query: 344 LKVPPNDITFIGLLSACAHTGFWN 367
++ + ++ L + A TG W+
Sbjct: 443 MRKDESG-DYVLLSNIYASTGQWD 465
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 287/497 (57%), Gaps = 9/497 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ L +C L L K++H ++++ L ++ + +I++ G A +F ++
Sbjct: 273 YTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ 332
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ N + +I + ++ L+ QM L+ D+F L +I C +
Sbjct: 333 DRNSVSWTVLIGGSLQYECFSKSVELFNQM-----RAELMAIDQFALATLISGCFNRMDL 387
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+Q+H+ K G + N+L+ LY KC +L A VF M++RDIV+W ++I+ Y
Sbjct: 388 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 447
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISI 252
+++G + KAR FD M ++W AM+ Y G+ + L ++ M + PD ++
Sbjct: 448 SQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 507
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V++ CA +G+ +LG+ I + K L+ + NA I MY KCG I++A +LFD +
Sbjct: 508 VTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNG 567
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+DVVSW+ +I G + HG +A F +M P+ I+++ +LS C+H+G EG +Y
Sbjct: 568 KDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLY 627
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
FD M R H I +EH+ C+VDLLGRAG L +A ++I++MPMKP A++WG+LLS+C+ +
Sbjct: 628 FDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHG 687
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N E+A +A +H+ L+ D+G+Y+LL+ IY+ G+ +D +++RKL+R K +KK PG S +
Sbjct: 688 NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWM 747
Query: 493 EVNNEVQEFVSGDDTKP 509
EV N+V F + D + P
Sbjct: 748 EVENKVHVFKADDVSHP 764
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 218/493 (44%), Gaps = 38/493 (7%)
Query: 21 LQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK-QVKEPN 76
L+SC + L + +H +++ L+ + FL ++ S G L+ A L + +KEPN
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDP----------------------------R 108
V +N M+ Y A L+ +M R R
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 109 TGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL 168
+G LP+ FT V+KSC L C L Q+ KF E AL+D++ +C +
Sbjct: 131 SGD-SLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A ++F ++ I N++++GYA+L + A F+ M +VSW MI+ + G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
EAL + +M G+ D + S L ACA+L SL G+ +H ++ + +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
ALIE+Y KCG +A ++F+ + +R+ VSW+ +IGG + K++ LF++M+ +
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ L+S C + G + H I L+ L + G L A +
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGH-NRAIVVSNSLISLYAKCGDLQNAEFV 428
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
M + D W S++++ YS + + A E ++ + + + Y +HG
Sbjct: 429 FSSMSER-DIVSWTSMITA---YSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAE 484
Query: 469 EDVSRMRKLIRSK 481
ED +M + S+
Sbjct: 485 EDGLKMYSAMLSQ 497
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 293/521 (56%), Gaps = 15/521 (2%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L +C + + ++H + K ++ ++ + ++D+ A +F+ +
Sbjct: 895 FASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMP 954
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E N+ +N++I Y N G A+ L+ M++ + +PD+ TL V+ +CAGL
Sbjct: 955 ERNIVSWNSLITCYEQNGPVGEALVLFVSMMK-----AGFVPDEVTLASVMSACAGLAAD 1009
Query: 134 SLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
G+Q+HA V K + + NAL+D+Y KC A VF+ M R +V+ +LI+G
Sbjct: 1010 REGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITG 1069
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YAR ++ A+M+F +M +++W +I+ Y G EAL +F +++ + P +
Sbjct: 1070 YARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTY 1129
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLL------RRTVICNALIEMYIKCGCINQASQL 306
+VL AC + L+LG+ H++ K + N+L++MY+K G I+ +++
Sbjct: 1130 GNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKV 1189
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F++M RD VSW+ +I G A +G+A A+HLF M K P+ +T IG+LSAC H+G
Sbjct: 1190 FERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLV 1249
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
EG YF SM DH I +HY C++DLLGRAG L + +I+EM M+PDA +W SLL
Sbjct: 1250 EEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLG 1309
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
SCR + N+E+ A L L+P ++G YVLLSN+YA+ G+W DV R+R ++ + + K
Sbjct: 1310 SCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQ 1369
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
PGCS IE+ +V F++ D+ P +I +L ++ + R
Sbjct: 1370 PGCSWIEIGRKVSVFLARDNGHPCKNEIHAILRIIQMQMSR 1410
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 216/432 (50%), Gaps = 15/432 (3%)
Query: 3 ARIGALSIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSG 59
+ + +L I+ + +L C ++L +++H I K + L T ++DV +
Sbjct: 140 SNMNSLGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNC 199
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
LA A F + EPN +N ++R Y + +A++++ +ML + + P +T
Sbjct: 200 FLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRML-----SAGVRPLGYT 254
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ + +C G+ IHA V + G + H ++++D+Y KC + A +F
Sbjct: 255 VSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAP 314
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+D+V +++SG A G++ A+ +F+ M +VSW AM++GY AL +F+Q
Sbjct: 315 MKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQ 374
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ E D I++ SVL AC + + GE +H + K ++ NAL+ MY KCGC
Sbjct: 375 MRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGC 434
Query: 300 INQASQ--LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
+ A + LF+ ERD SW+++I G H + A++ +MQ +V PN TF L
Sbjct: 435 LRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS-EVTPNQSTFSSAL 493
Query: 358 SACAHTGFWNEGLMYFDSM-KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
+ACA+ +G+ M ++ + I+ + L+D+ + + D ++ I E P +
Sbjct: 494 AACANIFLLKQGMQIHAYMIRKGYEIDDILR--SVLIDMYCKCRQFDYSIRIFEARPSR- 550
Query: 417 DAKIWGSLLSSC 428
D +W S++ C
Sbjct: 551 DVILWNSMIFGC 562
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 189/392 (48%), Gaps = 40/392 (10%)
Query: 48 LVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDP 107
+ T ++ S G +A A +F+ +KE N+ +NAM+ Y + A+ L++QM ++
Sbjct: 320 MSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQET 379
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
R D TL V+ +C G+L G+++HA K G S I +NAL+ +Y KC
Sbjct: 380 REF-----DAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGC 434
Query: 168 LIEAHKV--FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
L A ++ FE ++RD SW ++ISGY
Sbjct: 435 LRSAERLLLFEMGSERDSY-------------------------------SWNSLISGYE 463
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
AL +MQ + P++ + S L ACA + L+ G IH Y + +
Sbjct: 464 RHSMSEAALYALTKMQ-SEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDI 522
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+ + LI+MY KC + + ++F+ RDV+ W+++I G A GK + LF EMQ+
Sbjct: 523 LRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQG 582
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
+ + +TF+G L +C G G YF M D I +IEHY C+++LLG+ G + +
Sbjct: 583 IKADSVTFLGALVSCISEGHVRLGRSYFTLMM-DESIIPRIEHYECMIELLGKHGCMVEL 641
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ +E MP +P +W + CR Y N ++
Sbjct: 642 EDFVEHMPFEPTTAMWLRIFDCCREYGNRKLG 673
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 192/476 (40%), Gaps = 109/476 (22%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+S NL + H + LK FL+ ++ G L A +F ++ PN F
Sbjct: 769 LLRSAPNLPAARAAHARALKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFS 828
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDP----------------RTGSLIL------PDK 117
YNA++ A+ A L+ + DP R +L D
Sbjct: 829 YNALLSAHARLGRPADARALF-HAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADD 887
Query: 118 FTL-----PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
F L + +CA G Q+HA V K +ALLD+Y KC+ EA
Sbjct: 888 FVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEAR 947
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
+VFE M +R+IV+WN+LI+ Y + G + E
Sbjct: 948 RVFEAMPERNIVSWNSLITCYEQNGPV-------------------------------GE 976
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR-TVICNALI 291
AL +F M G PDE+++ SV+ ACA L + G +H K+ R V+ NAL+
Sbjct: 977 ALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALV 1036
Query: 292 EMYIKCG------C-------------------------INQASQLFDQMVERDVVSWST 320
+MY KCG C + A +F QMVE++V++W+
Sbjct: 1037 DMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNV 1096
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC-----------AHTGFWNEG 369
+I A +G+ +A+ LF ++R V P T+ +L+AC AH EG
Sbjct: 1097 LIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEG 1156
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ D E + LVD+ + G +D + E M + D W +++
Sbjct: 1157 FRF------DFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR-DNVSWNAMI 1205
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 159/343 (46%), Gaps = 8/343 (2%)
Query: 148 LKSHSITE----NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKAR 203
LKS + E N L+ Y + L +A +VF+E+ + ++N L+S +ARLG+ AR
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 204 MLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLG 263
LF +P S+ A+I+ A+AL M + S S L ACA
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
G +H K+ + I +AL++MY KC +A ++F+ M ER++VSW+++I
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
+G +A+ LF M + P+++T ++SACA EG + +
Sbjct: 967 CYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFR 1026
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+ LVD+ + GR A + + M + SL++ +N+E A +
Sbjct: 1027 EDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVS-ETSLITGYARSANVEDAQMVFSQ 1085
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
++ ++ + +L YA++G E+ R+ ++ +S+ T
Sbjct: 1086 MV---EKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPT 1125
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
+N I A G + AR LFD MP SW A+I+ + G +EAL +F M +GI
Sbjct: 88 FNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGI 147
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
P + ++ SVL CA+ L +H + K ++ AL+++Y C + A +
Sbjct: 148 RPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARR 207
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
FD ++E + +SW+ ++ G A+ +F M V P T + AC
Sbjct: 208 AFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNA 267
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
EG + R H EH + +VD+ + G +D A ++ PMK
Sbjct: 268 LEEGRCIHAFVLR-HGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMK 316
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 127/296 (42%), Gaps = 42/296 (14%)
Query: 20 ILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS--LLFKQVKE 74
+L +C ++++ K +H +K S L ++ + + G L A LLF+ E
Sbjct: 390 VLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSE 449
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+ + +N++I Y + + A+ +M S + P++ T + +CA +
Sbjct: 450 RDSYSWNSLISGYERHSMSEAALYALTKM------QSEVTPNQSTFSSALAACANIFLLK 503
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G QIHA++ + G + I + L+D+Y KC + + ++FE RD++ WN++I G A
Sbjct: 504 QGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCA 563
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
Y+ G Y LD+F +MQ GI+ D ++ +
Sbjct: 564 -----------------------------YSGKGEY--GLDLFDEMQKQGIKADSVTFLG 592
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
L +C G + LG ++ R +IE+ K GC+ + + M
Sbjct: 593 ALVSCISEGHVRLGRSYFTLMMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHM 648
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
T + N IE CG + A +LFD M RD SW+ +I + G +A+ LF M
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 344 LKVPPNDITFIGLLSACAHT-GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
L + P D T +LS CA ++ KRD + + LVD+ G L
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRD--FQSNVILGTALVDVYGNCFLL 202
Query: 403 DQALNIIEEMPMKPDAKIW 421
A +++ ++P+A W
Sbjct: 203 ADARRAFDDI-LEPNAISW 220
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 300/497 (60%), Gaps = 10/497 (2%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+IE +K+H +K L +++ ++ + S G + +F ++ + +V +N +I +
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISS 121
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
Y N + AI ++K+M ++ S + D+ T+ + +C+ L +G++I+ V
Sbjct: 122 YVGNGRFEDAIGVFKRMSQE----SNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE 177
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
S I NAL+D++ KC L +A VF+ M D+++ W +++ GY G++ +AR+LF
Sbjct: 178 FEMSVRIG-NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLF 236
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
++ P +V WTAM++GY + EAL++FR MQ GI PD +VS+L CAQ G+LE
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
G+WIH Y ++N + V+ AL++MY KCGCI A ++F ++ ERD SW+++I GLA
Sbjct: 297 QGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLA 356
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+G + +A+ L++EM+ + V + ITF+ +L+AC H GF EG F SM H+++ K
Sbjct: 357 MNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKS 416
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPD---AKIWGSLLSSCRTYSNLEIAVIAMEH 443
EH CL+DLL RAG LD+A +I++M + D ++ SLLS+ R Y N++IA E
Sbjct: 417 EHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEK 476
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVS 503
L +E D+ + LL+++YA RWEDV+ +R+ ++ ++K PGCS IE++ EF+
Sbjct: 477 LEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIV 536
Query: 504 GDD--TKPFLKDIFWLL 518
GDD + P + +I +L
Sbjct: 537 GDDLLSHPKMDEINSML 553
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 71/386 (18%)
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ P++ +YN M+++ + + + L+ ++ G + PD FTLP V+KS L
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGEL-----RGQGLYPDNFTLPVVLKSIGRLR 60
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
G+++H + K GL+ S N+L+ +Y ++ HKVF+EM RD+V+WN LIS
Sbjct: 61 KVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLIS 120
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEI 250
Y G+ + +A+ VF++M Q ++ DE
Sbjct: 121 SYVGNGR-------------------------------FEDAIGVFKRMSQESNLKFDEG 149
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+IVS L AC+ L +LE+GE I+ + I NAL++M+ KCGC+++A +FD M
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 311 VE-------------------------------RDVVSWSTVIGGLANHGKAHKAIHLFH 339
+ +DVV W+ ++ G + +A+ LF
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
MQ + P++ + LL+ CA TG +G + + K+ LVD+ +
Sbjct: 269 CMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA-LVDMYAKC 327
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLL 425
G ++ AL + E+ + D W SL+
Sbjct: 328 GCIETALEVFYEIKER-DTASWTSLI 352
>gi|115441803|ref|NP_001045181.1| Os01g0914600 [Oryza sativa Japonica Group]
gi|20804987|dbj|BAB92663.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534712|dbj|BAF07095.1| Os01g0914600 [Oryza sativa Japonica Group]
Length = 589
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/362 (45%), Positives = 253/362 (69%), Gaps = 1/362 (0%)
Query: 158 LLDLYGKCDELIE-AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
++D YG+ ++ A ++F++M DRD+V WN++I GYAR G+M +AR+LF++MP ++S
Sbjct: 218 MIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVIS 277
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W+ +I GY G EAL+ F++M GI+PD ++ V + ACAQLG+LE G W+H Y +
Sbjct: 278 WSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLE 337
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
K +L V+ ALI+MY+KCG ++ A +F+ M ++ VV+W+ +I GL HG AI
Sbjct: 338 KKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIK 397
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF++M+ + P +D++ + +L++C H G +EGL F M++D +E K+EHYG L+DLL
Sbjct: 398 LFNQMETERAPMDDLSILAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLL 457
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
GRAGR+DQA N IE MPM+P ++WGSLL+SCR++ +E+A +++E L L +D+G YV
Sbjct: 458 GRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYV 517
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFW 516
LLSNIYA G W+DV R+RKL+ ++ MKK G S+IEV+ ++ EFV+G + P ++I+
Sbjct: 518 LLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVDGQIHEFVNGGSSHPHKEEIYL 577
Query: 517 LL 518
L
Sbjct: 578 TL 579
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
MID G + A +LF+++ E NV ++ +I Y A+ +++MLR
Sbjct: 248 NSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLR---- 303
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I PD+ + +CA L G+ +H+++ K + + + AL+D+Y KC L
Sbjct: 304 -CGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLD 362
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYT 225
A +FE M + +V WN +I G G A LF++M +S A+++ T
Sbjct: 363 LAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCT 422
Query: 226 HIGSYAEALDVFRQMQM-VGIEP 247
H G +E L +F +M+ +G+EP
Sbjct: 423 HAGLVSEGLGIFYRMEKDLGLEP 445
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQM--LRD 106
T +ID+ G L A L+F+ + + +V +N MI H YGL AI L+ QM R
Sbjct: 349 TALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGL-GTHGYGLDAIKLFNQMETERA 407
Query: 107 PRTGSLILPDKFTLPFVIKSC--AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK 164
P D ++ V+ SC AGL+ LG + GL+ AL+DL G+
Sbjct: 408 PM-------DDLSILAVLTSCTHAGLVSEGLGI-FYRMEKDLGLEPKVEHYGALIDLLGR 459
Query: 165 CDELIEAHKVFEEM 178
+ +A E M
Sbjct: 460 AGRVDQARNTIETM 473
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 255/380 (67%), Gaps = 4/380 (1%)
Query: 140 HAHVCKFG--LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
H+ + K G S +AL+ Y K L+EA KVF+E+T RD +N L+S YA+ G
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGG 167
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIVSVL 256
+ A LF++MP +VSWTAM+SGY G + EA++ F +M + G++P+E+++ SVL
Sbjct: 168 LVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVL 227
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDV 315
PACA +G++ELG + Y LLR + NAL+EMY KCG I QA Q+F + ++D+
Sbjct: 228 PACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDL 287
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
SW+++I A HG +A+ LF++++ V P+ ITF+G++ AC H G NEG ++FDS
Sbjct: 288 CSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDS 347
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+ + ++ +IEHYGC+VDLLGRAG L ++ ++I MP++PDA IWG+LL +C + N+E
Sbjct: 348 MEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVE 407
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A +AM+ L+ LEP++T N V+LSNIYA G+W+ V+++ KL++ K KK+ G S IE++
Sbjct: 408 LAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELD 467
Query: 496 NEVQEFVSGDDTKPFLKDIF 515
+ +F+ D + P ++++
Sbjct: 468 GTMHKFLVEDKSHPRFEEVY 487
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 255/380 (67%), Gaps = 4/380 (1%)
Query: 140 HAHVCKFG--LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
H+ + K G S +AL+ Y K L+EA KVF+E+T RD +N L+S YA+ G
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGG 167
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIVSVL 256
+ A LF++MP +VSWTAM+SGY G + EA++ F +M + G++P+E+++ SVL
Sbjct: 168 LVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVL 227
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDV 315
PACA +G++ELG + Y LLR + NAL+EMY KCG I QA Q+F + ++D+
Sbjct: 228 PACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDL 287
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
SW+++I A HG +A+ LF++++ V P+ ITF+G++ AC H G NEG ++FDS
Sbjct: 288 CSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDS 347
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+ + ++ +IEHYGC+VDLLGRAG L ++ ++I MP++PDA IWG+LL +C + N+E
Sbjct: 348 MEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVE 407
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A +AM+ L+ LEP++T N V+LSNIYA G+W+ V+++ KL++ K KK+ G S IE++
Sbjct: 408 LAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELD 467
Query: 496 NEVQEFVSGDDTKPFLKDIF 515
+ +F+ D + P ++++
Sbjct: 468 GTMHKFLVEDKSHPRFEEVY 487
>gi|218189594|gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
Length = 589
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/362 (45%), Positives = 253/362 (69%), Gaps = 1/362 (0%)
Query: 158 LLDLYGKCDELIE-AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
++D YG+ ++ A ++F++M DRD+V WN++I GYAR G+M +AR+LF++MP ++S
Sbjct: 218 MIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVIS 277
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W+ +I GY G EAL+ F++M GI+PD ++ V + ACAQLG+LE G W+H Y +
Sbjct: 278 WSIVIDGYVRFGEPNEALEFFQRMLSCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLE 337
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
K +L V+ ALI+MY+KCG ++ A +F+ M ++ VV+W+ +I GL HG AI
Sbjct: 338 KKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIK 397
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF++M+ + P +D++ + +L++C H G +EGL F M++D +E K+EHYG L+DLL
Sbjct: 398 LFNQMETERAPMDDLSVLAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLL 457
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
GRAGR+DQA N IE MPM+P ++WGSLL+SCR++ +E+A +++E L L +D+G YV
Sbjct: 458 GRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYV 517
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFW 516
LLSNIYA G W+DV R+RKL+ ++ MKK G S+IEV+ ++ EFV+G + P ++I+
Sbjct: 518 LLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVDGQIHEFVNGGSSHPHKEEIYL 577
Query: 517 LL 518
L
Sbjct: 578 TL 579
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 10/203 (4%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
MID G + A +LF+++ E NV ++ +I Y A+ +++ML
Sbjct: 248 NSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRML----- 302
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I PD+ + +CA L G+ +H+++ K + + + AL+D+Y KC L
Sbjct: 303 SCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLD 362
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYT 225
A +FE M + +V WN +I G G A LF++M +S A+++ T
Sbjct: 363 LAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSVLAVLTSCT 422
Query: 226 HIGSYAEALDVFRQMQM-VGIEP 247
H G +E L +F +M+ +G+EP
Sbjct: 423 HAGLVSEGLGIFYRMEKDLGLEP 445
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQM--LRD 106
T +ID+ G L A L+F+ + + +V +N MI H YGL AI L+ QM R
Sbjct: 349 TALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGL-GTHGYGLDAIKLFNQMETERA 407
Query: 107 PRTGSLILPDKFTLPFVIKSC--AGLLCPSLGKQIHAHVCK-FGLKSHSITENALLDLYG 163
P D ++ V+ SC AGL+ LG I + K GL+ AL+DL G
Sbjct: 408 PM-------DDLSVLAVLTSCTHAGLVSEGLG--IFYRMEKDLGLEPKVEHYGALIDLLG 458
Query: 164 KCDELIEAHKVFEEM 178
+ + +A E M
Sbjct: 459 RAGRVDQARNTIETM 473
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 289/532 (54%), Gaps = 39/532 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
I++ C L+ ++K L+Q L+ + I C S L A Q++EPNVF+
Sbjct: 34 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKCLDLAVSTMTQMQEPNVFV 93
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
YNA+ + + ++ LY +MLRD + P +T ++K A G+ +
Sbjct: 94 YNALFKGFVTCSHPIRSLELYVRMLRDS-----VSPSSYTYSSLVK--ASSFASRFGESL 146
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW------------- 186
AH+ KFG H + L+D Y + EA KVF+EM +RD +AW
Sbjct: 147 QAHIWKFGFGFHVKIQTTLIDFYSATGGIREARKVFDEMPERDDIAWTTMVSAYRRVLDM 206
Query: 187 ------------------NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
N LI+GY LG +++A LF++MP I+SWT MI GY+
Sbjct: 207 DSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNK 266
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
Y EA+ VF +M GI PDE+++ +V+ ACA LG LE+G+ +HMY +N + I +
Sbjct: 267 RYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGS 326
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY KCG + +A +F + ++++ W+++I GLA HG A +A+ +F +M+ V P
Sbjct: 327 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 386
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N +TF+ + +AC H G +EG + SM D+ I +EHYG +V L +AG + +AL +
Sbjct: 387 NAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALEL 446
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I M +P+A IWG+LL CR + NL IA IA L+VLEP ++G Y LL ++YA+ RW
Sbjct: 447 IGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW 506
Query: 469 EDVSRMRKLIRSKSMKKT-PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
DV+ +R +R ++K PG S I ++ F + D + ++ LL+
Sbjct: 507 RDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLD 558
>gi|215741011|dbj|BAG97506.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/362 (45%), Positives = 253/362 (69%), Gaps = 1/362 (0%)
Query: 158 LLDLYGKCDELIE-AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
++D YG+ ++ A ++F++M DRD+V WN++I GYAR G+M +AR+LF++MP ++S
Sbjct: 112 MIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVIS 171
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W+ +I GY G EAL+ F++M GI+PD ++ V + ACAQLG+LE G W+H Y +
Sbjct: 172 WSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLE 231
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
K +L V+ ALI+MY+KCG ++ A +F+ M ++ VV+W+ +I GL HG AI
Sbjct: 232 KKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIK 291
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF++M+ + P +D++ + +L++C H G +EGL F M++D +E K+EHYG L+DLL
Sbjct: 292 LFNQMETERAPMDDLSILAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLL 351
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
GRAGR+DQA N IE MPM+P ++WGSLL+SCR++ +E+A +++E L L +D+G YV
Sbjct: 352 GRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYV 411
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFW 516
LLSNIYA G W+DV R+RKL+ ++ MKK G S+IEV+ ++ EFV+G + P ++I+
Sbjct: 412 LLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVDGQIHEFVNGGSSHPHKEEIYL 471
Query: 517 LL 518
L
Sbjct: 472 TL 473
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
MID G + A +LF+++ E NV ++ +I Y A+ +++MLR
Sbjct: 142 NSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLR---- 197
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I PD+ + +CA L G+ +H+++ K + + + AL+D+Y KC L
Sbjct: 198 -CGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLD 256
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYT 225
A +FE M + +V WN +I G G A LF++M +S A+++ T
Sbjct: 257 LAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCT 316
Query: 226 HIGSYAEALDVFRQMQM-VGIEP 247
H G +E L +F +M+ +G+EP
Sbjct: 317 HAGLVSEGLGIFYRMEKDLGLEP 339
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 11/177 (6%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ + PD + +VL AC +G +H + L NALI Y + G
Sbjct: 1 MRRAAVAPDAYTFPAVLKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGD 60
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++FD V RD+VSW++++ G G+ A LF EM++ + ++ ++
Sbjct: 61 CRSGRKVFDHGV-RDLVSWNSMVAGYVGCGEVDLAQDLFDEMRQ----RDAFSWATMIDG 115
Query: 360 CAH-TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
G + FD M + + + ++D R GR+D+A + EEMP +
Sbjct: 116 YGEMAGGVDRARELFDQMP-----DRDLVCWNSMIDGYARHGRMDEARVLFEEMPER 167
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQM--LRD 106
T +ID+ G L A L+F+ + + +V +N MI H YGL AI L+ QM R
Sbjct: 243 TALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGL-GTHGYGLDAIKLFNQMETERA 301
Query: 107 PRTGSLILPDKFTLPFVIKSC--AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK 164
P D ++ V+ SC AGL+ LG + GL+ AL+DL G+
Sbjct: 302 PM-------DDLSILAVLTSCTHAGLVSEGLGI-FYRMEKDLGLEPKVEHYGALIDLLGR 353
Query: 165 CDELIEAHKVFEEM 178
+ +A E M
Sbjct: 354 AGRVDQARNTIETM 367
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 301/586 (51%), Gaps = 79/586 (13%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA--------- 63
+E + + +LQ + L +IH +L+ L + L TK I C+S LA
Sbjct: 151 IERKCLSLLQQSKTRANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGI 210
Query: 64 -YASLLFK-QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
+A +F + + FL N+MI+AY Y + LY RD R + PD FT
Sbjct: 211 VHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALY----RDLRRNTSFTPDSFTFS 266
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
+ KSCA + G++IH+HV G AL+D+Y K ++ A K+F+EM DR
Sbjct: 267 VLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDR 326
Query: 182 DIVAWNNLISGYAR-------------------------------LGQMKKARMLFDKMP 210
V+W LI GY R LG M AR LFD+MP
Sbjct: 327 SQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMP 386
Query: 211 YTTIVSWT-------------------------------AMISGYTHIGSYAEALDVFRQ 239
++VSWT AMISGY EAL +F +
Sbjct: 387 ERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHE 446
Query: 240 MQ-MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
MQ +EPDE++IVSVLPA A LG+L+LG W+H + + L R T + ALI+MY KCG
Sbjct: 447 MQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCG 506
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I ++ +FD M E++ SW+ +I A +G+A +A+ LF EM PN+IT IG+LS
Sbjct: 507 EIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLS 566
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC H+G EG +F +M+ + + KIEHYGC+VDLLGRAG L +A ++E MP + +
Sbjct: 567 ACNHSGLVEEGKRWFKAME-EFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANG 625
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
I S L +C ++ A ++ + +E + GNY++L N+YA RW++ ++ L+
Sbjct: 626 IILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLM 685
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
R +KK GCS IEV++ V EFV+GD P + I +L L +H
Sbjct: 686 RRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKWEAIHSVLGQLWVH 731
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 289/532 (54%), Gaps = 39/532 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
I++ C L+ ++K L+Q L+ + I C S L A Q++EPNVF+
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFV 838
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
YNA+ + + ++ LY +MLRD + P +T ++K A G+ +
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRDS-----VSPSSYTYSSLVK--ASSFASRFGESL 891
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW------------- 186
AH+ KFG H + L+D Y + EA KVF+EM +RD +AW
Sbjct: 892 QAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDM 951
Query: 187 ------------------NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
N LI+GY LG +++A LF++MP I+SWT MI GY+
Sbjct: 952 DSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNK 1011
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
Y EA+ VF +M GI PDE+++ +V+ ACA LG LE+G+ +HMY +N + I +
Sbjct: 1012 RYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGS 1071
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY KCG + +A +F + ++++ W+++I GLA HG A +A+ +F +M+ V P
Sbjct: 1072 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 1131
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N +TF+ + +AC H G +EG + SM D+ I +EHYG +V L +AG + +AL +
Sbjct: 1132 NAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALEL 1191
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I M +P+A IWG+LL CR + NL IA IA L+VLEP ++G Y LL ++YA+ RW
Sbjct: 1192 IGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW 1251
Query: 469 EDVSRMRKLIRSKSMKKT-PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
DV+ +R +R ++K PG S I ++ F + D + ++ LL+
Sbjct: 1252 RDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLD 1303
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 300/529 (56%), Gaps = 6/529 (1%)
Query: 7 ALSIKELEDRFVPILQSCENLI-ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
LS E FV C++ E +H +K + F+ +I V G + A
Sbjct: 83 GLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCA 142
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF + + + +N+MI Y + + A L+++M R + PD FT ++
Sbjct: 143 RKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKM----REWGM-EPDGFTFVNLLS 197
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
C+ LG+ +H + G+K I NAL+D+Y KC L A +F+ ++++V+
Sbjct: 198 VCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVS 257
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W ++IS YA+ G ++ AR +FD+MP +VSW +MIS Y G Y EALD+F +M+ +
Sbjct: 258 WTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRV 317
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
PDE ++VS+L AC+QLG L +G+ IH Y N + N+LI+MY KCG + A
Sbjct: 318 VPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALD 377
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+F +M +++VSW+ +IG LA HG +AI LF EMQ P++IT GLLSAC+H+G
Sbjct: 378 IFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGL 437
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ GL YFD M + + +IEHY C+VDLLGR G L +A+ +I MPMKPD +WG+LL
Sbjct: 438 VDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALL 497
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+CR + N+EI ++ LL LEP G YVL+SNIY + RWEDV ++RKL+ + +KK
Sbjct: 498 GACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKK 557
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI 534
S IE++ + EF+ D I+ +L+ L H A + +I
Sbjct: 558 GRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGYLCNI 606
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 214/422 (50%), Gaps = 76/422 (18%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
LK +H QI+ + L+ + K+I C + GDL YA +F Q+ +PN F+YN++IR Y
Sbjct: 4 LKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGY 63
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL---GKQIHAHVC 144
+N+ A+ L+++M+ S + P++FTLPFV+K+C C S +H
Sbjct: 64 SNSDDPIDAVLLFRRMI-----CSGLSPNEFTLPFVLKACG---CKSAYWEAVLVHGLAI 115
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
K G+ S +NAL+ +Y C + A K+F+++TD+ +V+WN++I GYA +G K+A +
Sbjct: 116 KLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFL 175
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
L FR+M+ G+EPD + V++L C+Q
Sbjct: 176 L-------------------------------FRKMREWGMEPDGFTFVNLLSVCSQSRD 204
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
L+LG ++H + + ++ NAL++MY KCG ++ A +FD+ E++VVSW+++I
Sbjct: 205 LDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISA 264
Query: 325 LANH-------------------------------GKAHKAIHLFHEMQRLKVPPNDITF 353
A H G+ +A+ LF++M+ +V P++ T
Sbjct: 265 YAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATL 324
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
+ +L+AC+ G G + + + + + Y L+D+ + G + AL+I EMP
Sbjct: 325 VSILAACSQLGDLVMGKKIHNYILSNKG-AYGVTLYNSLIDMYAKCGPVVTALDIFLEMP 383
Query: 414 MK 415
K
Sbjct: 384 GK 385
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/479 (35%), Positives = 286/479 (59%), Gaps = 7/479 (1%)
Query: 20 ILQSCENL--IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+L++C + + +H ++LK F+ +I +L +A +F ++ E ++
Sbjct: 802 LLKACARISNVSCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDL 861
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+N++I Y Y + ++++M G D T+ V+ +C L +
Sbjct: 862 VSWNSLICGYGRCRRYSEVLVVFEEMRMADVKG-----DAVTMVKVVLACTVLGEWGVVD 916
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+ ++ + ++ N L+D+YG+ + A +VF+ M DR++V+WN +I GY + G
Sbjct: 917 AMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAG 976
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ AR LFD MP+ ++SWT+MIS Y+ G + +A+ +F++M + ++PDEI++ SVL
Sbjct: 977 NLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLS 1036
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACA +G+L++GE +H Y K + + NALI+MY KCG + + +F++M +RD VS
Sbjct: 1037 ACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVS 1096
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W++VI GLA +G A A++LF M R V P TF+G+L ACAH G ++GL YF+SM+
Sbjct: 1097 WTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESME 1156
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
R + + +++HYGC+VDLL R+G L +A I+ MPM PD +W LLS+ + + NL +A
Sbjct: 1157 RVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLA 1216
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
IA + LL +P ++GNY+L SN YA RWEDV +MR+L+ ++ K S +E+N+
Sbjct: 1217 EIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEIND 1275
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 188/400 (47%), Gaps = 70/400 (17%)
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
S ++ A+ LF+Q+ P + +N MIR ++ + AI Y M G +
Sbjct: 742 SPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFG-----NN 796
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
T PF++K+CA + S +HA V K G S NAL+ Y EL A KVF+E
Sbjct: 797 LTYPFLLKACARISNVSC-TTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDE 855
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M++RD+V+WN+LI GY R + Y+E L VF
Sbjct: 856 MSERDLVSWNSLICGYGRCRR-------------------------------YSEVLVVF 884
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH------------------ 279
+M+M ++ D +++V V+ AC LG + + + Y ++N
Sbjct: 885 EEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRR 944
Query: 280 ----LLRRT---------VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
L RR V NA+I Y K G + A +LFD M RDV+SW+++I +
Sbjct: 945 SMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYS 1004
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
G+ KA+ LF EM KV P++IT +LSACAH G + G + + R + + I
Sbjct: 1005 QAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYI-RKYDVNADI 1063
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
L+D+ + G +++ L++ EEM K D+ W S+++
Sbjct: 1064 YVGNALIDMYCKCGAVEKGLSVFEEMG-KRDSVSWTSVIA 1102
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 9/243 (3%)
Query: 174 VFEEMTDRDIVAWNNLISGYA-RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
+ +E+ D ++ NL+ YA + KA LF ++P T+ W MI G++ E
Sbjct: 720 MIKELLPTDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIE 779
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
A+ + M + + ++ +L ACA++ ++ +H K + NALI
Sbjct: 780 AIRNYNLMYSQALFGNNLTYPFLLKACARISNVSCTT-VHARVLKLGFDSDLFVSNALIH 838
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
Y + A ++FD+M ERD+VSW+++I G + + + +F EM+ V + +T
Sbjct: 839 GYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVT 898
Query: 353 FIGLLSACAHTGFWNEGLMYFDSM---KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+ ++ AC G W D+M ++ +E + L+D+ GR +D A +
Sbjct: 899 MVKVVLACTVLGEWG----VVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVF 954
Query: 410 EEM 412
+ M
Sbjct: 955 DRM 957
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/498 (35%), Positives = 301/498 (60%), Gaps = 15/498 (3%)
Query: 11 KELEDRFV-PILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SGGDLAYASLL 68
+EL ++F+ + +L LK++ + ++ LS S+FL K++ C +L+YA +
Sbjct: 20 EELVNQFISAAISKSRHLNHLKQVQSFLIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFI 79
Query: 69 FKQVKEPNVFLYNAMIRAYTNN---HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
F + PN LY A++ Y+++ H A + ++ M+ S P+ F P V+K
Sbjct: 80 FDRFSFPNTHLYAAVLTGYSSSLPLHASS-AFSFFRLMVNR----SFPRPNHFIYPLVLK 134
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC-DELIEAHKVFEEMTDRDIV 184
S L +H H+ K G + + + ALL Y + A ++F+EM++R++V
Sbjct: 135 STPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVV 194
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMV 243
+W ++SGYAR G + A LF++MP + SW A+++ T G + EA+ +FR+M
Sbjct: 195 SWTAMLSGYARSGDIFNAVALFEEMPERDVPSWNAILAACTQNGLFVEAVSLFRRMINDP 254
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
I P+E+++V VL ACAQ G+L+L + IH + + +L + N+L+++Y KCG + +A
Sbjct: 255 CIRPNEVTLVCVLSACAQTGTLQLAKGIHAFAYRRNLSSDVFVSNSLVDLYGKCGNLEEA 314
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK---VPPNDITFIGLLSAC 360
S +F ++ + +W+++I A HG++ +AI +F +M +L + P+ ITFIGLL+AC
Sbjct: 315 SSVFKMSSKKSLTAWNSMINCFALHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNAC 374
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
H G ++G YFD MK+ IE +IEHYGCL+DLLGRAG+ D+AL + M M+ D I
Sbjct: 375 THGGLVSKGRGYFDLMKKRFGIEPRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAI 434
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
WGSLL++C+ Y +L++A +A+++L+ L P + G +++N+Y + G WE+ R RK+I+
Sbjct: 435 WGSLLNACKKYGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKH 494
Query: 481 KSMKKTPGCSLIEVNNEV 498
++ K PG S IE++N++
Sbjct: 495 QNAYKPPGWSQIEIDNKL 512
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 299/535 (55%), Gaps = 31/535 (5%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
L +R + C+++ K+ L ++ +I + G A L Q+
Sbjct: 51 LANRLIDFYSKCDSIQSAHKV----FHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQM 106
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+PN+ YN++I ++ ++N++K ML+ S +L D+FTL ++ SCA L
Sbjct: 107 PKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQC---SNVLFDEFTLVSLVGSCASLGA 163
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
P L +Q+H GL S+ I NAL+D YGKC E + +F M +RD+V+W ++++
Sbjct: 164 PELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAA 223
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA+ +++ A LF +M VSWTA+I+G+ G EAL +F QM+ GI P +
Sbjct: 224 YAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTF 283
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRT--------VICNALIEMYIKCGCINQAS 304
SVL ACA L + G+ IH H++R T I NALI+MY KCG + A+
Sbjct: 284 ASVLSACADLALIARGKEIH-----GHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSAT 338
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
LF M E+D+VSW+++I G A +G +++ +F M + PN +TF+GLLSAC HTG
Sbjct: 339 TLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTG 398
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD-AKIWGS 423
+EGL DSM++D+ + + +HY ++DLLGR RL++A+ +I+ P D +WG+
Sbjct: 399 LVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGA 458
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL +CR + N+++A A E L LEP + YV++ NIYA RW++ ++R+L+ + +
Sbjct: 459 LLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAASRWDEARQVRRLMMERGL 518
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYED 538
+K CS IEV N +FV+ + + + +++ ++ +++D MY+
Sbjct: 519 RKEAACSWIEVRNTRHQFVAKERSHCQINEVYEVIH----------NLVDQMYDS 563
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 174/358 (48%), Gaps = 36/358 (10%)
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
+I C LGK +H+H K L + N L+D Y KCD + AHKVF + ++
Sbjct: 20 LISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPVKN 79
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-- 240
+WN +IS Y+R G +A L D+MP +VS+ ++ISG H G E+L+VF+ M
Sbjct: 80 THSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLK 139
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG-- 298
Q + DE ++VS++ +CA LG+ EL +H L +I NALI+ Y KCG
Sbjct: 140 QCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEP 199
Query: 299 -----------------------CINQASQ------LFDQMVERDVVSWSTVIGGLANHG 329
QAS+ LF QM E++ VSW+ +I G A +G
Sbjct: 200 DISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNG 259
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH--KIE 387
+ +A+HLF +M+ +PP+ TF +LSACA G + R I++ I
Sbjct: 260 RGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIF 319
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
L+D+ + G++ A + + M K D W SL++ + E ++ E ++
Sbjct: 320 ILNALIDMYCKCGQMRSATTLFKGMHEK-DIVSWNSLITGFAQNGHGEESLAVFERMI 376
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 120/283 (42%), Gaps = 48/283 (16%)
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
+ ++P S++ C L+LG+ +H + K L+ T + N LI+ Y KC I
Sbjct: 7 LSSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQ 66
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
A ++F + ++ SW+ +I + G ++A +L +M + PN +++ L+S
Sbjct: 67 SAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPK----PNLVSYNSLISGLG 122
Query: 362 HTGFWNEGLMYFDSM-----------------------------KRDHH-------IEHK 385
H GF E L F +M R H +
Sbjct: 123 HHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSN 182
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
I L+D G+ G D + +I MP + D W S++++ S LE A H L
Sbjct: 183 IIIGNALIDAYGKCGEPDISFSIFSRMPER-DVVSWTSMVAAYAQASRLEDA-----HWL 236
Query: 446 V--LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
++ ++T ++ L +A++GR ++ + + +R + + +
Sbjct: 237 FSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPS 279
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/471 (39%), Positives = 283/471 (60%), Gaps = 9/471 (1%)
Query: 28 IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
+E +K H +K + + ++D+ G A LF ++ + ++N MIR Y
Sbjct: 63 VEGRKAHAAAMKTGFWWDAYTASSLMDMYTLLGRADVARKLFDEMPHRALVVWNMMIRCY 122
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG 147
Y AI L ++M R S + PDK TL + C+ SLG++IHA++ G
Sbjct: 123 VRCGRYTAAIALAEEMER-----SGLTPDKVTLVTSVTVCSRAGDLSLGRRIHAYM--DG 175
Query: 148 LKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
+ S+ NALLD+Y K L EA K+FE+M R+I++W L+SGYA GQ+ KAR+LF
Sbjct: 176 VFGFSLPVANALLDMYMKNGCLEEAVKLFEQMPSRNIISWTILVSGYAFAGQLDKARVLF 235
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
+ ++ WTAMI+ G + EAL +FR+MQM +EPD +IV++L CA LG+L+
Sbjct: 236 YQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQMQRVEPDRFTIVTLLTCCANLGALD 295
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
GEWIH + + V+ ALI+MY KCG + ++ ++F+QM RD +W+++I GLA
Sbjct: 296 QGEWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQMQGRDTTAWTSIICGLA 355
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+G+A +A+ LF +M+R KV P+ ITFIG+LSAC H G +EG F +MK + I +I
Sbjct: 356 TNGQAGRALELFEDMERSKVKPDSITFIGVLSACCHGGLVDEGRKQFHAMKDVYRIPPRI 415
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA-KIWGSLLSSCRTYSNLEIAVIAMEHLL 445
EHY CLV+LLGRAG LD+A +I ++ + DA ++G+LL++C+ N+E++ + +
Sbjct: 416 EHYSCLVNLLGRAGLLDEAEKLIRDIQINKDAMPLFGALLTACKAQGNVEMSERLTKRIG 475
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ +L+SN+YA RWED R+R + ++KKT GCSLIEV
Sbjct: 476 EQGYQIPDVNLLMSNVYATASRWEDAIRVRSKMAHPTIKKTAGCSLIEVKG 526
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 168/381 (44%), Gaps = 70/381 (18%)
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N +IR + + +Y + G ++ D FT PFV+++ L G++ H
Sbjct: 15 NLLIRTLARRGSFARVMAVYYDL-----RGRGLVADSFTYPFVLRAIGVLKLSVEGRKAH 69
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
A K G + T ++L+D+Y A K+F+EM R +V WN +I Y R G+
Sbjct: 70 AAAMKTGFWWDAYTASSLMDMYTLLGRADVARKLFDEMPHRALVVWNMMIRCYVRCGR-- 127
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
Y A+ + +M+ G+ PD++++V+ + C+
Sbjct: 128 -----------------------------YTAAIALAEEMERSGLTPDKVTLVTSVTVCS 158
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
+ G L LG IH Y D V NAL++MY+K GC+ +A +LF+QM R+++SW+
Sbjct: 159 RAGDLSLGRRIHAYMDGVFGFSLPV-ANALLDMYMKNGCLEEAVKLFEQMPSRNIISWTI 217
Query: 321 VIGGLA-------------------------------NHGKAHKAIHLFHEMQRLKVPPN 349
++ G A HG +A+ LF EMQ +V P+
Sbjct: 218 LVSGYAFAGQLDKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQMQRVEPD 277
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
T + LL+ CA+ G ++G + D ++ L+D+ + G + +++ +
Sbjct: 278 RFTIVTLLTCCANLGALDQG-EWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVF 336
Query: 410 EEMPMKPDAKIWGSLLSSCRT 430
E+M + D W S++ T
Sbjct: 337 EQMQGR-DTTAWTSIICGLAT 356
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 280/510 (54%), Gaps = 21/510 (4%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDV-----CNSGGDLAYASLLFKQVKEPNV 77
S +++ K++H +++ L +ID+ C+ G L + + F+ +V
Sbjct: 90 SLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFR-----DV 144
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +M Y N L A+ +++M L R P+ T+ ++ +C L G
Sbjct: 145 ISWTSMASCYVNCGLLREALGAFRKMGLNGER------PNSVTVSSILPACTDLKDLKSG 198
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+++H V + G+ + +AL+++Y C + +A VF+ M+ RD V+WN LI+ Y
Sbjct: 199 REVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLN 258
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+ +K +F +M + SW A+I G G +AL+V +MQ G +P++I+I
Sbjct: 259 KECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITI 318
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
SVLPAC L SL G+ IH Y ++ + AL+ MY KCG + + ++F M +
Sbjct: 319 TSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTK 378
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
RD VSW+T+I + HG +A+ LF EM V PN +TF G+LS C+H+ +EGL+
Sbjct: 379 RDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLI 438
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
FDSM RDH +E +H+ C+VD+L RAGRL++A I++MP++P A WG+LL CR Y
Sbjct: 439 FDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYK 498
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N+E+ IA L +E ++ GNYVLLSNI W + S RKL+R + + K PGCS I
Sbjct: 499 NVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWI 558
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+V N V FV GD + +I+ L+ +
Sbjct: 559 QVRNRVHTFVVGDKSNDQSDEIYRFLDYMG 588
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 192/463 (41%), Gaps = 82/463 (17%)
Query: 48 LVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDP 107
L K I V ++ GDL A LF ++ +P++ + +I A T + AI Y D
Sbjct: 13 LALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYN----DF 68
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
R + + PDK L V K+CA L K++H +FG S + NAL+D+YGKC
Sbjct: 69 RHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRC 128
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
A VFE M RD+++W ++ S Y G ++
Sbjct: 129 SEGARLVFEGMPFRDVISWTSMASCYVNCGLLR--------------------------- 161
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
EAL FR+M + G P+ +++ S+LPAC L L+ G +H + +N + +
Sbjct: 162 ----EALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVS 217
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVV------------------------------- 316
+AL+ MY C I QA +FD M RD V
Sbjct: 218 SALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVG 277
Query: 317 ----SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
SW+ VIGG +G+ KA+ + MQ PN IT +L AC + G
Sbjct: 278 LNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQI 337
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
+ R H + LV + + G L+ + + M K D W +++ + +
Sbjct: 338 HGYIFR-HWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM-TKRDTVSWNTMIIATSMHG 395
Query: 433 NLEIAVIAMEHLLVLEPEDTG---NYVLLSNIYA--KHGRWED 470
N E A+ LL E D+G N V + + + H R D
Sbjct: 396 NGEEAL-----LLFREMVDSGVRPNSVTFTGVLSGCSHSRLVD 433
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 131/285 (45%), Gaps = 38/285 (13%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
IL +C +L +LK ++H +++ + + F+ + ++++ S + A L+F + +
Sbjct: 185 ILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRD 244
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQM-------------------LRDPRT-------- 109
+N +I AY N ++++ +M +++ RT
Sbjct: 245 TVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLS 304
Query: 110 ---GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
S P++ T+ V+ +C L GKQIH ++ + T AL+ +Y KC
Sbjct: 305 RMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCG 364
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMIS 222
+L + +VF MT RD V+WN +I + G ++A +LF +M + + V++T ++S
Sbjct: 365 DLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLS 424
Query: 223 GYTHIGSYAEALDVFRQMQMV-GIEPDEISIVSVLPACAQLGSLE 266
G +H E L +F M +EPD ++ ++ G LE
Sbjct: 425 GCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLE 469
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L +C NL L K+IH I ++ Q T ++ + GDL + +F + + +
Sbjct: 321 VLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRD 380
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+N MI A + + A+ L+++M+ S + P+ T V+ C+
Sbjct: 381 TVSWNTMIIATSMHGNGEEALLLFREMV-----DSGVRPNSVTFTGVLSGCS-------- 427
Query: 137 KQIHAHVCKFGL-------KSHSITENA-----LLDLYGKCDELIEAHKVFEEMT-DRDI 183
H+ + GL + HS+ +A ++D+ + L EA++ ++M +
Sbjct: 428 ---HSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTA 484
Query: 184 VAWNNLISG 192
AW L+ G
Sbjct: 485 GAWGALLGG 493
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 280/486 (57%), Gaps = 13/486 (2%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVK----EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR 105
+ +I S GD A L ++++ EPNV +N ++ + G A + ++R
Sbjct: 90 SALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRS---GRARDAVLALVR 146
Query: 106 DPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
G LPD + + + + ++G+Q+H +V K G + + AL+D+YGKC
Sbjct: 147 --MHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKC 204
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMI 221
E +VF+E + D+ + N L++G +R Q+ +A LF + I VSWT+++
Sbjct: 205 GRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIV 264
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
+ G EA+D+FR+MQ GIEP+ ++I VLPA A + +L G H + +
Sbjct: 265 ACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFH 324
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
+ +AL++MY KCG + A +F+ M R+VVSW+ +IGG A HG+A A+ LF M
Sbjct: 325 HDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSM 384
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
Q K P+ +TF +L AC+ G+ EG YF+ M+ H I ++EHY C+V LLGRAG+
Sbjct: 385 QSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGK 444
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
LD A +II +MP +PD IWGSLL SCR + N+ +A +A E+L LEPE+ GNYVLLSNI
Sbjct: 445 LDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNI 504
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
YA W+ V+R+R ++++ +KK GCS IE+ N+V ++GD + P + I L+ L
Sbjct: 505 YASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHL 564
Query: 522 ALHQDR 527
+ R
Sbjct: 565 TMEMRR 570
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 157/364 (43%), Gaps = 46/364 (12%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
PD LP +KSC+ L L + +HA G+ + ++LL Y + +A V
Sbjct: 21 PDPRLLPSALKSCSAL---RLARALHAAAAVAGVSRDAFVASSLLHAYLRFGATADARSV 77
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY----TTIVSWTAMISGYTHIGSY 230
+ M R +V W+ LI+ +A G + A L ++M +++W ++SG G
Sbjct: 78 LDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRA 137
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
+A+ +M G PD + L A +G + +GE +H Y K + AL
Sbjct: 138 RDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATAL 197
Query: 291 IEMYIKCGCINQASQLFDQM-----------------------------------VERDV 315
I+MY KCG ++ ++FD+ +E +V
Sbjct: 198 IDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNV 257
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL-MYFD 374
VSW++++ +G+ +A+ LF EMQ + PN +T +L A A+ G +
Sbjct: 258 VSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCF 317
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
S+++ H H I LVD+ + GR+ A I E MP + + W +++ +
Sbjct: 318 SLRKGFH--HDIYVGSALVDMYAKCGRVRDARMIFEAMPYR-NVVSWNAMIGGYAMHGEA 374
Query: 435 EIAV 438
E AV
Sbjct: 375 ENAV 378
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 147/379 (38%), Gaps = 64/379 (16%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+++H ++K + T +ID+ G +F + +V NA++ + N
Sbjct: 176 EQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRN 235
Query: 91 HLYGLAINLYKQML----------------------RDPRTGSL--------ILPDKFTL 120
A+ L+++ + RD L I P+ T+
Sbjct: 236 AQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTI 295
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
P V+ + A + G+ H + G +AL+D+Y KC + +A +FE M
Sbjct: 296 PCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPY 355
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
R++V+WN +I GYA G+ + A+ +FR M
Sbjct: 356 RNVVSWNAMIGGYAMHGEAEN-------------------------------AVRLFRSM 384
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGE-WIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
Q +PD ++ VL AC+Q G E G + + K+ + R ++ + + G
Sbjct: 385 QSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGK 444
Query: 300 INQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
++ A + +QM E D W +++G HG A + +L+ P N ++ L +
Sbjct: 445 LDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLE-PENAGNYVLLSN 503
Query: 359 ACAHTGFWNEGLMYFDSMK 377
A W+ D MK
Sbjct: 504 IYASKKMWDGVNRLRDMMK 522
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/536 (36%), Positives = 291/536 (54%), Gaps = 58/536 (10%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSN---FLVTKMIDVCNSGGDLAYASLLFKQV 72
R + + ++C ++ +LK++H L+ FL K++ + +S D+ YA +F +
Sbjct: 31 RILSLAETCSDMSQLKQLHAFTLRTTYPDEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 90
Query: 73 KEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ + F++N +IRA ++ A LY++ML + PDK T PFV+K+CA +
Sbjct: 91 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESA----PDKHTFPFVLKACAYIF 146
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
S GKQ+H + K G N L+ YG C
Sbjct: 147 GLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSC-------------------------- 180
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G + AR +FD+MP ++VSW +MI +G Y AL +FR MQ EPD +
Sbjct: 181 -----GCLDLARKVFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRDMQK-SFEPDGYT 234
Query: 252 IVSVLPACAQLGSLELGEWIHMY----CDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+ SVL ACA LGSL LG W H++ CD + + +I N+LIEMY KCG + A Q+F
Sbjct: 235 MQSVLSACAGLGSLSLGTWSHVFLLRNCDVD-VAMDVLIKNSLIEMYCKCGSLRMAEQVF 293
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR--LKVPPNDITFIGLLSACAHTGF 365
M + D+ SW+ +I G A HGKA +A++ F M + V PN +TF+ LL AC H G
Sbjct: 294 QGMRKHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIACNHRGM 353
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
N+G YFD M R++ IE +EHYGC++DLL RAG + +A++++ MPMKPDA IW SLL
Sbjct: 354 VNKGRQYFDMMVREYGIEPALEHYGCIIDLLARAGYITEAIDMVMSMPMKPDAVIWRSLL 413
Query: 426 SS-CRTYSNLEIA-------VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
+ C+ +++E++ + ME +G YVLLS +YA RW DV +RKL
Sbjct: 414 DACCKKGASVELSEEIARNIIGTMEDNQSSNSNCSGAYVLLSRVYASANRWNDVGIVRKL 473
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
+ ++K PGCS IE+N EF +GD + P K I+ L+++ DR + ++D
Sbjct: 474 MSDHGIRKEPGCSSIEINGISNEFFAGDTSHPQTKQIYQQLKVI---DDRLRSIVD 526
>gi|413937828|gb|AFW72379.1| hypothetical protein ZEAMMB73_412000 [Zea mays]
Length = 471
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/467 (38%), Positives = 289/467 (61%), Gaps = 17/467 (3%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGL---------AINLYKQMLRDPRTGSLILPDKF 118
LF PNVFLY+A++ AY + A+ L+ +MLR R P++F
Sbjct: 5 LFDATPHPNVFLYSAILSAYASAAAAASPSSYAHARDALALFLRMLRHGRPS----PNQF 60
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGL--KSHSITENALLDLYGKCDELIEAHKVFE 176
P V+++ A + + + IH+H CK G + + +LLD Y + + +A K+F+
Sbjct: 61 VYPLVLRA-ACAVDVRIVRSIHSHACKSGFCGYEYDVIRTSLLDCYSRHAMMADARKLFD 119
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
+T+R +V+W L+SGYAR G++ A MLF++M + +W A+I+G + +AEA+ +
Sbjct: 120 GLTERSVVSWTALVSGYARAGKIGDAIMLFERMTERDVAAWNAIITGCSQNRLFAEAVGI 179
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
F +M G+ P+ +I VL AC LG L++G+ IH + + + + N LI+MY K
Sbjct: 180 FGRMVGTGLRPNATTISCVLSACGHLGMLKIGKLIHCCAWRTCVGFGSSVLNGLIDMYGK 239
Query: 297 CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
CG + A+ +F ++ +R + +W+++I LA HG + AI +F+EM+ V P+ ITF+GL
Sbjct: 240 CGNLEGATWIFYEVSDRSLTAWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVITFVGL 299
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
L+AC H GF +EG+ YF+ M+ +H IE +IEHYGC+++LLGRAGR ALN+I M ++
Sbjct: 300 LNACTHGGFVDEGIKYFELMQHEHGIEPEIEHYGCIINLLGRAGRFQDALNVISNMRIES 359
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
D IWGSLL++CR + N+E+A +A+ LL L+P + V+L+N+Y++ G WE+V + RK
Sbjct: 360 DEVIWGSLLNACRVHRNVELAELAIRKLLELDPNNANYVVMLANVYSEGGLWEEVRKARK 419
Query: 477 LIRSKSM-KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+ +++ KK PGCS IEV+ ++ F SGDD ++I+ LE LA
Sbjct: 420 FMEEENIGKKLPGCSWIEVDRKIHRFYSGDDAHSESENIYDTLEDLA 466
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 151/338 (44%), Gaps = 45/338 (13%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
++ L +S T ++ G + A +LF+++ E +V +NA+I + N L+
Sbjct: 116 KLFDGLTERSVVSWTALVSGYARAGKIGDAIMLFERMTERDVAAWNAIITGCSQNRLFAE 175
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
A+ ++ +M+ G+ + P+ T+ V+ +C L +GK IH + + S
Sbjct: 176 AVGIFGRMV-----GTGLRPNATTISCVLSACGHLGMLKIGKLIHCCAWRTCVGFGSSVL 230
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
N L+D+YGKC L A +F E++DR + AWN+LI+ A G K
Sbjct: 231 NGLIDMYGKCGNLEGATWIFYEVSDRSLTAWNSLINCLALHGHSKC-------------- 276
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMY 274
A+ VF +M+ G+EPD I+ V +L AC G ++ G ++ +
Sbjct: 277 -----------------AISVFNEMRGEGVEPDVITFVGLLNACTHGGFVDEGIKYFELM 319
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHK 333
++ + +I + + G A + M +E D V W G L N + H+
Sbjct: 320 QHEHGIEPEIEHYGCIINLLGRAGRFQDALNVISNMRIESDEVIW----GSLLNACRVHR 375
Query: 334 AIHLFHEMQR--LKVPPNDITFIGLLSAC-AHTGFWNE 368
+ L R L++ PN+ ++ +L+ + G W E
Sbjct: 376 NVELAELAIRKLLELDPNNANYVVMLANVYSEGGLWEE 413
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 111/279 (39%), Gaps = 46/279 (16%)
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYA---------EALDVFRQMQMVG-IEPDEISI 252
R LFD P+ + ++A++S Y + A +AL +F +M G P++
Sbjct: 3 RHLFDATPHPNVFLYSAILSAYASAAAAASPSSYAHARDALALFLRMLRHGRPSPNQFVY 62
Query: 253 VSVLPACAQLGSLELGEWIHMY--------------------CDKNHLL----------- 281
VL A + + + IH + C H +
Sbjct: 63 PLVLRAACAV-DVRIVRSIHSHACKSGFCGYEYDVIRTSLLDCYSRHAMMADARKLFDGL 121
Query: 282 --RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
R V AL+ Y + G I A LF++M ERDV +W+ +I G + + +A+ +F
Sbjct: 122 TERSVVSWTALVSGYARAGKIGDAIMLFERMTERDVAAWNAIITGCSQNRLFAEAVGIFG 181
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
M + PN T +LSAC H G G + R + L+D+ G+
Sbjct: 182 RMVGTGLRPNATTISCVLSACGHLGMLKIGKLIHCCAWRT-CVGFGSSVLNGLIDMYGKC 240
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
G L+ A I E+ + W SL++ + + + A+
Sbjct: 241 GNLEGATWIFYEVSDR-SLTAWNSLINCLALHGHSKCAI 278
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 299/518 (57%), Gaps = 12/518 (2%)
Query: 18 VPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V ++ +C L +L+ K++ I + ++ +++ ++D+ + A LF +
Sbjct: 239 VCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGA 298
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
N+ L NAM Y L A+ + M+ S I PD+ ++ I SC+ L
Sbjct: 299 SNLDLCNAMASNYVRQGLTKEALGVLNLMM-----DSGIRPDRISMLSAISSCSQLRNIL 353
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK H +V + G +S NAL+D+Y KC A ++F+ M+++ +V WN++++GY
Sbjct: 354 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYI 413
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEPDEISIV 253
G++ A F+ MP IVSW +IS Y EA++VF MQ + D ++++
Sbjct: 414 ENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMM 473
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+ AC LG+L+L +WI+ Y +KN + + L++M+ +CG A +F+ + R
Sbjct: 474 SIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 533
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV +W+ IG +A G +AI LF+EM + P+ + FIG L+AC H G +G F
Sbjct: 534 DVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIF 593
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM++ H + + HYGC+VDLLGRAG L++AL +I++MP +P+ IW SLL++CR N
Sbjct: 594 NSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGN 653
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A A E + VL PE TG+YVLLSN+YA GRW D++++R ++ K ++K PG S+I+
Sbjct: 654 VEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQ 713
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
+ + EF SGD++ P ++ I +L+ L+ RA D+
Sbjct: 714 IRGKTHEFTSGDESHPEMRKIEAMLDELS---QRASDL 748
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 194/416 (46%), Gaps = 53/416 (12%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMI-DVCNSGG--DLAYASLLFKQVKE-PN 76
L++C+ + ELK H + K L +TK++ C G L++A +F+ +
Sbjct: 38 LKNCKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGT 97
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
F+YN++IR Y ++ L AI L+ +M+ S I PDK+T PF + CA G
Sbjct: 98 CFMYNSLIRGYASSGLCKEAILLFIRMM-----NSGISPDKYTFPFGLSVCAKSRDKGNG 152
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
QIH + K +N+L+ Y +C EL A KVF+EM++R++V+W ++I GYAR
Sbjct: 153 IQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARR 212
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
K A LF FR ++ + P+ +++V V+
Sbjct: 213 EFAKDAVDLF------------------------------FRMVRDEDVIPNSVTMVCVI 242
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA+L LE GE ++ + + + ++ +AL++MY+KC I+ A +LFD+ ++
Sbjct: 243 SACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLD 302
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG--FWNEGLMYFD 374
+ + G +A+ + + M + P+ I+ + +S+C+ W +
Sbjct: 303 LCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSC---- 358
Query: 375 SMKRDHHIEHKIEHY----GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + + E + L+D+ + R D A I + M K W S+++
Sbjct: 359 ---HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVA 410
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/497 (36%), Positives = 278/497 (55%), Gaps = 36/497 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+P+ L LK++H ++ L + + I G L + +F + V
Sbjct: 314 LPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTV 373
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+NA++ Y N A++LY QM T S + PD FT+ ++ +C+ + G+
Sbjct: 374 SSWNALLCGYAQNSDPRKALDLYLQM-----TDSGLDPDWFTIGSLLLACSRMKSLHYGE 428
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+IH + GL +LL LY C G
Sbjct: 429 EIHGFALRNGLAVDPFIGISLLSLYICC-------------------------------G 457
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ A++LFD M + ++VSW MI+GY+ G EA+++FRQM GI+P EI+I+ V
Sbjct: 458 KPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCG 517
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
AC+QL +L LG+ +H + K HL + +++I+MY K GCI + ++FD++ E+DV S
Sbjct: 518 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 577
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G HG+ +A+ LF +M RL + P+D TF G+L AC+H G +GL YF+ M
Sbjct: 578 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML 637
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
H+IE K+EHY C+VD+LGRAGR+D AL +IEEMP PD++IW SLLSSCR + NL +
Sbjct: 638 NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLG 697
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
LL LEPE NYVL+SN++A G+W+DV R+R ++ ++K GCS IEV +
Sbjct: 698 EKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGK 757
Query: 498 VQEFVSGDDTKPFLKDI 514
V F+ GD+ P L+++
Sbjct: 758 VHNFLIGDEMLPELEEV 774
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 188/350 (53%), Gaps = 45/350 (12%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLV-TKMIDVCNSGGDLAYASLLFKQVKEP 75
+LQ+C ++ +++H + ++F++ T++I + + G + + ++F +++
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
N+F +NA++ AYT N L+ A++++ +++ PD FTLP VIK+CAGLL L
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHK----PDNFTLPCVIKACAGLLDLGL 119
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+ IH K L S NAL+ +YGKC + EA KVFE M +R++V+WN++I G++
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE---PDEISI 252
G ++ E+ + FR+M +VG E PD ++
Sbjct: 180 NGFLQ-------------------------------ESFNAFREM-LVGEESFVPDVATL 207
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V+VLP CA +E G +H K L ++ N+LI+MY KC +++A LFD+ +
Sbjct: 208 VTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDK 267
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQR--LKVPPNDITFIGLLSAC 360
+++VSW+++IGG A + +L +MQ K+ ++ T + +L C
Sbjct: 268 KNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 218/507 (42%), Gaps = 81/507 (15%)
Query: 14 EDRFVP-------ILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLA 63
E+ FVP +L C +++K +H +K L++ + +ID+ + L+
Sbjct: 197 EESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLS 256
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
A LLF + + N+ +N+MI Y L ++M + + + D+FT+ V
Sbjct: 257 EAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTED---AKMKADEFTILNV 313
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+ C K++H + + GL+S+ + NA + Y +C L + +VF+ M + +
Sbjct: 314 LPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTV 373
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
+WN L+ GYA+ +K ALD++ QM
Sbjct: 374 SSWNALLCGYAQNSDPRK-------------------------------ALDLYLQMTDS 402
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G++PD +I S+L AC+++ SL GE IH + +N L I +L+ +YI CG A
Sbjct: 403 GLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAA 462
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
LFD M R +VSW+ +I G + +G +AI+LF +M + P +I + + AC+
Sbjct: 463 QVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQL 522
Query: 364 G------------------------------FWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
+ G + D E + + ++
Sbjct: 523 SALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVII 582
Query: 394 DLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL--- 447
G GR +AL + E+M +KPD + +L +C +E + +L L
Sbjct: 583 AGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNI 642
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRM 474
EP+ +Y + ++ + GR +D R+
Sbjct: 643 EPK-LEHYTCVVDMLGRAGRIDDALRL 668
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 39/348 (11%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
++++C L++L + IH K L F+ +I + G + A +F+ + E N
Sbjct: 107 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERN 166
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +N++I ++ N + N +++ML + +PD TL V+ CAG G
Sbjct: 167 LVSWNSIICGFSENGFLQESFNAFREMLVGEES---FVPDVATLVTVLPVCAGEEDIEKG 223
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+H K GL + N+L+D+Y KC L EA
Sbjct: 224 MAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEA------------------------- 258
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM--VGIEPDEISIVS 254
++LFDK IVSW +MI GY + ++MQ ++ DE +I++
Sbjct: 259 ------QLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILN 312
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
VLP C + L+ + +H Y ++ L ++ NA I Y +CG + + ++FD M +
Sbjct: 313 VLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKT 372
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
V SW+ ++ G A + KA+ L+ +M + P+ T LL AC+
Sbjct: 373 VSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 420
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 100/183 (54%), Gaps = 3/183 (1%)
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM- 240
D V +I+ Y+ G +RM+FDK+ + W A++S YT + +A+ +F ++
Sbjct: 33 DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELI 92
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ +PD ++ V+ ACA L L LG+ IH K L+ + NALI MY KCG +
Sbjct: 93 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLV 152
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLLS 358
+A ++F+ M ER++VSW+++I G + +G ++ + F EM P+ T + +L
Sbjct: 153 EEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLP 212
Query: 359 ACA 361
CA
Sbjct: 213 VCA 215
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 281/500 (56%), Gaps = 43/500 (8%)
Query: 21 LQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
++SC + +L + + K F++ +I + S GD+ A +LF V+ V
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGV 237
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQML--RDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+NAMI Y N + + ++K ML R P D+ TL V +C L +L
Sbjct: 238 IAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPF-------DEVTLLSVATACGRLGDANL 290
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+ I + + G+ AL+D+Y KC
Sbjct: 291 GQWIAEYAEEKGMLRSRNLATALVDMYAKC------------------------------ 320
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G++ KAR LFD+M +V+W+AMISGYT EAL +F +MQ + P+++++VSV
Sbjct: 321 -GELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSV 379
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L ACA LG+LE G+W+H Y + L ++ AL++ Y KCGCI A + F+ M R+
Sbjct: 380 LSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNT 439
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
+W+ +I G+A++G++ +A+ LF M + P D+TFIG+L AC+H EG +F S
Sbjct: 440 WTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTS 499
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M +D+ I +IEHYGC+VDLLGRAG +D+A I MP++P+A +W +LLS+C + N+E
Sbjct: 500 MTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVE 559
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
I A++ ++ L+P +GNY+LLSN YA G+W++ + +RK ++ K ++K PGCSLIE+
Sbjct: 560 IGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELE 619
Query: 496 NEVQEFVSGDDTKPFLKDIF 515
+ EF + D P L +I+
Sbjct: 620 GTIFEFFAEDSEHPQLTEIY 639
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 200/401 (49%), Gaps = 45/401 (11%)
Query: 57 NSGGDLAYASLLFKQVKEP--NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL 114
S L+YA LF+ P + YN +IR++ A++L+ +ML D + +
Sbjct: 113 TSSAHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDD----TAVS 168
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
PD+ T+ +KSC+ + S+G+ + A+ K G N+L+ +Y C
Sbjct: 169 PDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCG-------- 220
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
D+VA A +LF + +++W AMI+GY G + E +
Sbjct: 221 -------DVVA----------------AHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVV 257
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
++F+ M V DE++++SV AC +LG LG+WI Y ++ +LR + AL++MY
Sbjct: 258 EMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMY 317
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
KCG +++A +LFD+M RDVV+WS +I G + +A+ +F+EMQ +V PND+T +
Sbjct: 318 AKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMV 377
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM 414
+LSACA G G + S R + + LVD + G + A+ E MP+
Sbjct: 378 SVLSACAVLGALETG-KWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPV 436
Query: 415 KPDAKIWGSLL----SSCRTYSNLEIAVIAMEHLLVLEPED 451
+ + W +L+ S+ R+ LE+ +E +EP D
Sbjct: 437 R-NTWTWTALIKGMASNGRSREALELFSSMLE--ANIEPTD 474
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 255/411 (62%), Gaps = 2/411 (0%)
Query: 111 SLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIE 170
S LP+++T FV K+C L G+QI H K GL+S+ NA++ +Y + E
Sbjct: 26 SGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDE 85
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
A +VF+ D+D+ +WN +I GY G++ +A+ +FD+M +VSWT +I+GY +G +
Sbjct: 86 ARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCF 145
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
EALD+F +M G P+E ++ S L ACA L +L+ G WIH+Y DK+ + + +L
Sbjct: 146 KEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASL 205
Query: 291 IEMYIKCGCINQASQLF--DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
++MY KCG I+ A+++F + ++ V W+ +IGG A HGK+ +AI LF +M+ KV P
Sbjct: 206 LDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSP 265
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N +TF+ LL+AC+H EG YF SM + IE +IEHYGC+VDLLGR+G L +A
Sbjct: 266 NKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEET 325
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
+ MPM PDA IWG+LL +CR + ++E + + L+ + G +VLL+N+Y+ G+W
Sbjct: 326 VFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQW 385
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
++ +R+ I KKTPGCS IE+N +F+ GD + P K ++ L+
Sbjct: 386 DEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLD 436
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 42/251 (16%)
Query: 233 ALDVFRQMQMV-GIEPDEISIVSVLPACAQ-LGSLELGEWIHMYCDKNHLLRRTVICNAL 290
++ +F M V G P+ + V V AC LG LE GE I ++ K L + NA+
Sbjct: 15 SMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLE-GEQIRVHAIKIGLESNLFVTNAM 73
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK----------------- 333
I MY G +++A ++FD +++D+ SW+ +IGG G+ +
Sbjct: 74 IRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWT 133
Query: 334 --------------AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MYFDSM 376
A+ LFHEM + PPN+ T L+ACA+ ++G +Y D
Sbjct: 134 TIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKS 193
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII-EEMPMKPDAKIWGSLLSSCRTYSNLE 435
+ I+ L+D+ + G +D A + +E +K W +++ + +
Sbjct: 194 E----IKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSK 249
Query: 436 IAVIAMEHLLV 446
A+ E + V
Sbjct: 250 EAIDLFEQMKV 260
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 118/271 (43%), Gaps = 28/271 (10%)
Query: 21 LQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK--EP 75
L +C NL+ L + IH I K + + L+ ++D+ G++ +A+ +F +
Sbjct: 171 LAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKL 230
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA-GLLCPS 134
V+ +NAMI Y + AI+L++QM + + P+K T ++ +C+ G L
Sbjct: 231 KVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEK-----VSPNKVTFVALLNACSHGKLVEE 285
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHK-VFEEMTDRDIVAWNNLISG- 192
+ +G++ ++DL G+ L EA + VF D W L+
Sbjct: 286 GRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGAC 345
Query: 193 --YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+ + + ++ + ++ I + + Y+ G + EA V +++++ G +
Sbjct: 346 RIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKK--- 402
Query: 251 SIVSVLPACAQLGSLELGEWIHMYC--DKNH 279
P C+ S+EL H + D++H
Sbjct: 403 -----TPGCS---SIELNGVFHQFLVGDRSH 425
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 282/488 (57%), Gaps = 40/488 (8%)
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAIN---LYKQMLRDPRTGSLILP 115
G +YA LF Q+ EP F YN++IRA ++ A + +Y++MLR GS LP
Sbjct: 74 GAAPSYARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLR---AGS-PLP 129
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
+ FTL F +K+C+ + G+Q+H+ + GL+ + LL+LY KC+E+ A VF
Sbjct: 130 NSFTLAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVF 189
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
+ M DK + +W+AMI GY+ +G EAL
Sbjct: 190 DGMVG--------------------------DK----NLAAWSAMIGGYSRVGMVNEALG 219
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
+FR+MQ + PDE+++VSV+ ACA+ G+L+LG W+H + D+ + + ALI+MY
Sbjct: 220 LFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYA 279
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
KCG I +A +FD M ERD +WS +I GLA HG A+ LF M LKV PN++TFIG
Sbjct: 280 KCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIG 339
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+LSACAH+G NEG Y+ +M+ + I+ +E+YGC+VDL R+ LD+A + + M +
Sbjct: 340 VLSACAHSGLVNEGRRYWSTMQ-ELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIP 398
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
P++ IW +LL + + + +I A + LL LEP + NYVLLSN+YA + +W+ VS MR
Sbjct: 399 PNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMR 458
Query: 476 KLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA--KDVID 533
K ++ ++ GCS IE+N + +FV DD+ P +K+I LL +A RA K
Sbjct: 459 KKMKENNVNVVAGCSSIEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGHKPWTA 518
Query: 534 IMYEDIGE 541
+ D+GE
Sbjct: 519 AVLHDVGE 526
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 13/236 (5%)
Query: 21 LQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK-QVKEPN 76
L++C L E +++H+Q + L S ++ T ++++ ++A A +F V + N
Sbjct: 138 LKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKN 197
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ ++AMI Y+ + A+ L+++M + + PD+ T+ VI +CA LG
Sbjct: 198 LAAWSAMIGGYSRVGMVNEALGLFREM-----QAADVNPDEVTMVSVISACAKAGALDLG 252
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ +HA + + G+ AL+D+Y KC + A VF+ M +RD AW+ +I G A
Sbjct: 253 RWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIH 312
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
G ++ A LF +M + V++ ++S H G E + MQ +GI+P
Sbjct: 313 GLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQELGIKPS 368
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/474 (37%), Positives = 278/474 (58%), Gaps = 46/474 (9%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G + A +F ++ +V +NAMI Y Y A+ L+K+M++
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK---- 200
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ V+ +CA LG+Q+H+ + G S+ NAL+DLY KC
Sbjct: 201 -TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKC---- 255
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A L + + ++SW +I GYTH+
Sbjct: 256 ---------------------------GEVETACELLEGLSNKDVISWNTLIGGYTHMNL 288
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
Y EAL +F++M G P++++++S+LPACA LG++++G WIH+Y DK L+ V+ NA
Sbjct: 289 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK--LKGVVVTNA 346
Query: 290 ------LIEMYIKCGCINQASQLFDQMV-ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
LI+MY KCG I+ A Q+ D R + +W+ +I G A HG+A+ A +F M+
Sbjct: 347 SSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMR 406
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+ + P+DITF+GLLSAC+H+G + G F SM++D++I K+EHYGC++DLLG +G
Sbjct: 407 KNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLF 466
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIY 462
+A +I MPM+PD IW SLL +C+ + NLE+ + L+ +EPE+ G+YVLLSNIY
Sbjct: 467 KEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIY 526
Query: 463 AKHGRWEDVSRMRKLIRSKSM-KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
A G+W +V ++R L+ K M KK PGCS IE+++ V EF+ GD P ++I+
Sbjct: 527 ATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 580
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 136/428 (31%), Positives = 229/428 (53%), Gaps = 15/428 (3%)
Query: 41 LLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAI 97
L +++ +++++ C L YA +F+ + EPN ++N M R + + A+
Sbjct: 1 LFPNTHYAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSAL 60
Query: 98 NLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
LY M+ SL +LP+ FT PF++KSCA G+QIH HV K G
Sbjct: 61 KLYVVMI------SLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHT 114
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
+L+ +Y + L +A KVF+ + RD+V++ LI+GYA G ++ A+ +FD++P +VS
Sbjct: 115 SLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVS 174
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W AMISGY G+Y +AL++F++M ++PDE ++ +V+ ACAQ GS+ELG +H + +
Sbjct: 175 WNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWIN 234
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
+ I NALI++Y KCG + A +L + + +DV+SW+T+IGG + +A+
Sbjct: 235 DHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALL 294
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MYFDSMKRDHHIEHKIEHYGCLV 393
LF EM R PND+T + +L ACAH G + G +Y D + + + L+
Sbjct: 295 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLI 354
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY--SNLEIAVIAMEHLLVLEPED 451
D+ + G +D A + + W +++ + +N + + +EP+D
Sbjct: 355 DMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDD 414
Query: 452 TGNYVLLS 459
LLS
Sbjct: 415 ITFVGLLS 422
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 173/372 (46%), Gaps = 51/372 (13%)
Query: 9 SIKELEDRFVPILQSC--ENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
++K E ++ +C IEL +++H+ I + + +V +ID+ + G++ A
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
L + + +V +N +I YT+ +LY A+ L+++MLR T P+ T+ ++
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-----PNDVTMLSILP 316
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSIT-----ENALLDLYGKCDELIEAHKVFEEMT- 179
+CA L +G+ IH ++ K LK +T +L+D+Y KC ++ A +V +
Sbjct: 317 ACAHLGAIDIGRWIHVYIDK-KLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAF 375
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+R + WN +I G+A G+ A D+F +
Sbjct: 376 NRSLSTWNAMIFGFAMHGRANA-------------------------------AFDIFSR 404
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWI--HMYCDKNHLLRRTVICNALIEMYIKC 297
M+ GIEPD+I+ V +L AC+ G L+LG I M D N + + +I++
Sbjct: 405 MRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYN-ITPKLEHYGCMIDLLGHS 463
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
G +A ++ + M +E D V W +++ HG ++ +++ P N +++ L
Sbjct: 464 GLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIE-PENPGSYVLL 522
Query: 357 LSACAHTGFWNE 368
+ A G WNE
Sbjct: 523 SNIYATAGKWNE 534
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 264/458 (57%), Gaps = 9/458 (1%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+NAMI Y + LY A ++++M+ S I D+FT VI CA C LGK++
Sbjct: 257 WNAMISGYAHRGLYLEAFEMFRKMIM-----SKIQLDEFTFTSVISVCANAGCFRLGKEM 311
Query: 140 HAHVCKFGLKSHS----ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
HA+ K NAL+ Y KC ++ A ++F +M +RD+V+WN ++SGY
Sbjct: 312 HAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVN 371
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
+ M +A+ F++MP I+SW MISG IG EAL F +M++ G EP + +
Sbjct: 372 VRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGA 431
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ +C+ LGSL+ G +H + NALI MY +CG ++ A LF M D
Sbjct: 432 IISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDA 491
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
+SW+ +I L HG+ +AI LF EM + + P+ I+F+ ++SAC+H G EG YFDS
Sbjct: 492 ISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDS 551
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M + + EHY ++DLL RAG+ +A ++E MP +P A IW +LL+ CR + N++
Sbjct: 552 MHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNID 611
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ + A E L L+P+ G YVLLSN+YA G+W D++++RKL+R + +KK PGCS IEV
Sbjct: 612 LGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVE 671
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
N+V F+ GD P ++ I+ LE L L + V D
Sbjct: 672 NKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPD 709
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 199/429 (46%), Gaps = 77/429 (17%)
Query: 9 SIKELEDRFVPILQSC--ENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA 63
SI+ +R+ +LQ C ++ I + +H ++ ++ ++ID+ + L
Sbjct: 6 SIRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLN 65
Query: 64 YASLLFKQVKEPNVF---------------------------------LYNAMIRAYTNN 90
YA LF ++ +P++ YNAMI AY++N
Sbjct: 66 YARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHN 125
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK---QIHAHVCKFG 147
H AI L+ M RD PD +T V+ + A L K Q+H V K G
Sbjct: 126 HDGHAAIELFCDMQRDN-----FRPDNYTFTSVLGALA--LVAEKEKHCQQLHCAVVKSG 178
Query: 148 LKSHSITENALLDLYGKCDE---------LIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+ NAL+ Y KC + EA K+F+EM +RD ++W +I+GY +
Sbjct: 179 TGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNND 238
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ A+ + V+W AMISGY H G Y EA ++FR+M M I+ DE + SV+
Sbjct: 239 LDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISV 298
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTV----------ICNALIEMYIKCGCINQASQLFD 308
CA G LG+ +H Y +TV + NALI Y KCG ++ A ++F+
Sbjct: 299 CANAGCFRLGKEMHAY------FLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFN 352
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M ERD+VSW+ ++ G N +A F+EM N +++I ++S A GF E
Sbjct: 353 KMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPE----KNILSWIIMISGLAQIGFAEE 408
Query: 369 GLMYFDSMK 377
L +F+ MK
Sbjct: 409 ALKFFNRMK 417
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 151/339 (44%), Gaps = 47/339 (13%)
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
SL + +HAH+ G + N L+D+Y K +L A +F+E+ DIVA LI+ Y
Sbjct: 30 SLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAY 89
Query: 194 ARLGQMKKARMLFDKMP--YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
+ G +K +R +F P V + AMI+ Y+H A+++F MQ PD +
Sbjct: 90 SAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYT 149
Query: 252 IVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKC---------GCIN 301
SVL A A + E + +H K+ T + NALI Y+KC +
Sbjct: 150 FTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMA 209
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANH--------------------------GKAHKAI 335
+A +LFD+M RD +SW+T+I G + G AH+ +
Sbjct: 210 EARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGL 269
Query: 336 HL-----FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MYFDSMKRDHHIEHKIE 387
+L F +M K+ ++ TF ++S CA+ G + G YF + + +
Sbjct: 270 YLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMP 329
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
L+ + G++D A I +MP + D W +LS
Sbjct: 330 VNNALITFYWKCGKVDIAQEIFNKMPER-DLVSWNIILS 367
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 287/529 (54%), Gaps = 54/529 (10%)
Query: 12 ELEDRFVP-ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
E++ +P +L++C + K+IH +K L F+V ++ + + G L A L
Sbjct: 106 EVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARL 165
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLA---INLYKQML------RDPRTGSL------ 112
LF ++ E +V ++ MIRAY YG + I + M+ D G
Sbjct: 166 LFDKMSERDVVSWSTMIRAYIT-LFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMI 224
Query: 113 ---ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ P+ T+ +I SC + LGK++HA++ + G AL+D+YGKC
Sbjct: 225 EENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKC---- 280
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ AR +FD M +++WTAMIS Y
Sbjct: 281 ---------------------------GEIRSARAIFDSMKNKDVMTWTAMISAYAQANC 313
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
A +F QM+ G+ P+E+++VS+L CA G+L++G+W H Y DK + ++ A
Sbjct: 314 IDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTA 373
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI+MY KCG I+ A +LF + ++RD+ +W+ ++ G HG KA+ LF EM+ L V PN
Sbjct: 374 LIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPN 433
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
DITFIG L AC+H G EG F+ M D + K+EHYGC+VDLLGRAG LD+A +I
Sbjct: 434 DITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMI 493
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
E MP+ P+ IWG++L++C+ + N + +A LL LEP++ G VL+SNIYA RW
Sbjct: 494 ESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWN 553
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
DV+ MRK ++ +KK PG S IEVN V +F GD P ++ I +L
Sbjct: 554 DVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEML 602
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
AL+ + M+ + IE D I SVL AC+Q+ +G+ IH + KN L+ + NAL++
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN--HGKAHKAI--------------- 335
MY +CG + A LFD+M ERDVVSWST+I +G + ++I
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 336 -----HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
LF M V PNDIT + L+ +C G G + R+ +
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRN-GFGMSLALAT 271
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
LVD+ G+ G + A I + M K D W +++S+
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMKNK-DVMTWTAMISA 307
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 185/484 (38%), Positives = 286/484 (59%), Gaps = 29/484 (5%)
Query: 62 LAYASLLF--KQVKEPNVFLYNAMIRAYTNN---HLYGLAINLYKQMLRDPRTGSLILPD 116
+AYA+ +F + +K + FL+N +IRA +N I++Y +M R+ R + PD
Sbjct: 8 IAYANPIFHIRHLKLES-FLWNIIIRAIVHNVSSPQRHSPISVYLRM-RNHR----VSPD 61
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
T PF++ S L LG++ HA + FGL +LL++Y C +L A +VF+
Sbjct: 62 FHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFD 121
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
+ +D+ AWN++++ YA+ G + AR LFD+MP ++SW+ +I+GY G Y EALD+
Sbjct: 122 DSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDL 181
Query: 237 FRQMQM-----VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
FR+MQ+ + P+E ++ +VL AC +LG+LE G+W+H Y DK H+ V+ ALI
Sbjct: 182 FREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALI 241
Query: 292 EMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPN 349
+MY KCG + +A ++F+ + ++DV ++S +I LA +G + LF EM + PN
Sbjct: 242 DMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPN 301
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF+G+L AC H G NEG YF M + I I+HYGC+VDL GR+G + +A + I
Sbjct: 302 SVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 361
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
MPM+PD IWGSLLS R +++ A++ L+ L+P ++G YVLLSN+YAK GRW
Sbjct: 362 ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWM 421
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAK 529
+ + K PGCS +EV V EFV GD+++ + I+ +L+ + A
Sbjct: 422 E-----------GINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAG 470
Query: 530 DVID 533
V D
Sbjct: 471 YVTD 474
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Query: 20 ILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV-KEP 75
+L +C L L++ +H I KY + L T +ID+ G L A +F + +
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+V Y+AMI +YGL + Q+ + T I P+ T ++ +C +
Sbjct: 265 DVKAYSAMICCLA---MYGLTDECF-QLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 136 GKQ-IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLISGY 193
GK + +FG+ ++DLYG+ + EA M + D++ W +L+SG
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 194 ARLGQMK 200
LG +K
Sbjct: 381 RMLGDIK 387
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/504 (36%), Positives = 281/504 (55%), Gaps = 38/504 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+LQ+ L L ++H I+ +S L+TK++++ + G ++Y +F V P+ FL
Sbjct: 18 LLQAGPRLYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDSFL 77
Query: 80 YNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+ ++I++ + +H + + ++ Y +M+ S + P +T VIKSCA L G+
Sbjct: 78 FTSLIKSTSKSHNFSIYSLYFYSRMVL-----SNVSPSNYTFTSVIKSCADLSALKHGRV 132
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+H HV G + AL+ LYGKC +LI
Sbjct: 133 VHGHVLVHGFGLDVYVQAALVALYGKCGDLI----------------------------- 163
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
AR +FDK+ +IV+W +MISGY G EA+ +F +M+ G+EPD + VSVL A
Sbjct: 164 --NARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSA 221
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA LG+ LG W+H Y N L V+ +LI MYI+CG +++A ++FD M ER+VV+W
Sbjct: 222 CAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAW 281
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ +I G +G +A+ LFHEM+R + PN ITF+ +LSACAH G NEG F S++
Sbjct: 282 TAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIRE 341
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNII-EEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
++H+ +EH CLVD+LGRAG LD+A N I EE+P P I ++L +C+ + N ++
Sbjct: 342 EYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLG 401
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
EHLL EPE+ +YV+LSNIYA GR + V +R + K +KK G S +EV+ +
Sbjct: 402 AQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQK 461
Query: 498 VQEFVSGDDTKPFLKDIFWLLELL 521
F GD + I+ L+ L
Sbjct: 462 TYLFSMGDKSHSETNAIYHYLDEL 485
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 177/486 (36%), Positives = 280/486 (57%), Gaps = 38/486 (7%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T ++ S G + A +F ++ +V +NAMI Y Y A+ L+K+M++
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK---- 188
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ VI + A LG+Q+H+ + G S+ NAL+D Y KC
Sbjct: 189 -TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKC---- 243
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+M+ A LF + Y ++SW +I GYTH+
Sbjct: 244 ---------------------------GEMETACGLFLGLSYKDVISWNILIGGYTHLNL 276
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVIC 287
Y EAL +F++M G P++++++S+L ACA LG++++G WIH+Y DK + + +
Sbjct: 277 YKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 336
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+LI+MY KCG I A Q+F+ M+ + + +W+ +I G A HG+A+ A +F M++ ++
Sbjct: 337 TSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIK 396
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+DITF+GLLSAC+H G + G F SM ++ I K+EHYGC++DLLG +G +A
Sbjct: 397 PDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEE 456
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I M M+PD IW SLL +C+ + N+E+ ++L +EP + G+YVLLSNIYA GR
Sbjct: 457 MISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGR 516
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
W +V+R+R L+ K MKK PGCS IE+++ V EF+ GD P ++I+ +LE + +
Sbjct: 517 WNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQE 576
Query: 528 AKDVID 533
A V D
Sbjct: 577 AGFVPD 582
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 209/369 (56%), Gaps = 16/369 (4%)
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTL 120
L YA +F+ ++EPN+ ++N M R + + A+ LY M+ SL +LP+ +T
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMI------SLGLLPNSYTF 66
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PF++KSCA L G QIH HV K G + +L+ +Y + + L +AHKVF+ +
Sbjct: 67 PFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSH 126
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+V++ L++GYA G ++ AR +FD++P +VSW AMISGY G+Y EAL++F++M
Sbjct: 127 RDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEM 186
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ PDE ++V+V+ A A+ GS+ELG +H + + I NALI+ Y KCG +
Sbjct: 187 MKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEM 246
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A LF + +DV+SW+ +IGG + +A+ LF EM R PND+T + +L AC
Sbjct: 247 ETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHAC 306
Query: 361 AHTGFWNEGL---MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP- 416
AH G + G +Y D KR + + L+D+ + G ++ A + M K
Sbjct: 307 AHLGAIDIGRWIHVYID--KRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSL 364
Query: 417 ---DAKIWG 422
+A I+G
Sbjct: 365 PAWNAMIFG 373
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 169/363 (46%), Gaps = 51/363 (14%)
Query: 28 IEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
IEL +++H+ I + + +V +ID + G++ A LF + +V +N +I
Sbjct: 211 IELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGG 270
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
YT+ +LY A+ L+++MLR + P+ T+ ++ +CA L +G+ IH ++ K
Sbjct: 271 YTHLNLYKEALLLFQEMLRSGES-----PNDVTMLSILHACAHLGAIDIGRWIHVYIDKR 325
Query: 147 --GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
G+ + S +L+D+Y KC ++ AH+VF M + + AWN +I G+A G+ A
Sbjct: 326 LKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAA-- 383
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
D+F +M+ I+PD+I+ V +L AC+ G
Sbjct: 384 -----------------------------FDIFSRMRKNEIKPDDITFVGLLSACSHAGM 414
Query: 265 LELGEWIHMYCDKNHLLRRTVIC---NALIEMYIKCGCINQASQLFDQM-VERDVVSWST 320
L+LG H++ H + T +I++ G +A ++ M +E D V W +
Sbjct: 415 LDLGR--HIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCS 472
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE-----GLMYFDS 375
++ HG + +++ P N +++ L + A G WNE GL+
Sbjct: 473 LLKACKMHGNVELGEKFAQNLFKIE-PNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKG 531
Query: 376 MKR 378
MK+
Sbjct: 532 MKK 534
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 291/514 (56%), Gaps = 16/514 (3%)
Query: 19 PILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDV-----CNSGGDLAYASLLFKQVK 73
P+L+ C+++ LK+IH +LK LSQS + + +++V C+ +YA +FK ++
Sbjct: 12 PLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQ 71
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL-- 131
+ N+F+YN+MIR Y + AI Y ++ L +K+T P +IK+CA +
Sbjct: 72 QRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRG-----FLANKYTFPPLIKACALVYRE 126
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
+G +HAHV G ++ + +AL++ Y D L A +F++ + +D+V W ++
Sbjct: 127 LKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKSSGKDVVVWTVMVD 185
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GY ++G ++ AR+LFD+MP ++SW+AM++ Y+ + + E L +FRQMQ I P++
Sbjct: 186 GYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSV 245
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
I SVL ACA LG++ G W+H Y + L ++ AL++MY KCG I A ++F+ +
Sbjct: 246 IASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGIS 305
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+D +W+ +I G A G K++ LF +M + TF+ +L+AC H GL
Sbjct: 306 NKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLE 365
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP---MKPDAKIWGSLLSSC 428
+FD M + ++ + EHY C+VDL+ RAG ++ A +EE DA +WG++LS+C
Sbjct: 366 FFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSAC 425
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R Y N+EI L L D G VL NI+++ GR +RK KK PG
Sbjct: 426 RQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPG 485
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
CS+I V+ VQEF++GD + P ++ I +L L+
Sbjct: 486 CSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLS 519
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/477 (35%), Positives = 277/477 (58%), Gaps = 13/477 (2%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A +F + E NV +N++I Y N G A+ L+ +M+ + PD+ TL V+
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMM-----AAGFSPDEVTLSSVM 259
Query: 125 KSCAGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+CAGL G+Q+HAH+ K L+ + NAL+D+Y KC EA +F+ M R I
Sbjct: 260 SACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSI 319
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
V+ ++++GYA+ ++ A+++F +M +++W +I+ Y G EA+ +F Q++
Sbjct: 320 VSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRD 379
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL------RRTVICNALIEMYIKC 297
I P + +VL AC + L+LG+ H++ K + N+L++MY+K
Sbjct: 380 SIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKT 439
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G I+ +++F++M RD VSW+ +I G A +G+A A+HLF M P+ +T IG+L
Sbjct: 440 GSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVL 499
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
SAC H+G +EG YF SM DH I +HY C+VDLLGRAG L +A +I +MPM+PD
Sbjct: 500 SACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPD 559
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
+ +W SLL +CR + N+E+ L L+P+++G YVLLSN+YA+ G+W +V R+R+
Sbjct: 560 SVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRS 619
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAK-DVID 533
++ + + K PGCS IE+ ++ F++ D P +I L ++ + R D ID
Sbjct: 620 MKDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTLRIIQMEMGRTSIDEID 676
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 199/480 (41%), Gaps = 115/480 (23%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+S NL + H +ILK ++ FL+ ++ G L A +F ++ N F
Sbjct: 26 LLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFS 85
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDP------------------------RTGSLILP 115
YNA++ AY A L+ + + DP R + +
Sbjct: 86 YNALLSAYARLGRPDEARALF-EAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHA 144
Query: 116 DKFTL-----PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIE 170
D F L + +CA G+Q+H V + +AL+D+Y KC+ +
Sbjct: 145 DDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPED 204
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
A +VF+ M +R++V+WN+LI+ Y + G + +A ML
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALML------------------------- 239
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY---CDKNHLLRRTVIC 287
F +M G PDE+++ SV+ ACA L + G +H + CD+ L V+
Sbjct: 240 ------FVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDR--LRDDMVLN 291
Query: 288 NALIEMYIKCG------CI-------------------------NQASQLFDQMVERDVV 316
NAL++MY KCG CI A +F QMVE++V+
Sbjct: 292 NALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVI 351
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC-----------AHTGF 365
+W+ +I A +G+ +AI LF +++R + P T+ +L+AC AH
Sbjct: 352 AWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHV 411
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
EG + D E + LVD+ + G +D + E M + D W +++
Sbjct: 412 LKEGFRF------DFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR-DNVSWNAMI 464
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 6/355 (1%)
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S + HA + K + + N L+ Y + L +A +VF+E+ R+ ++N L+S Y
Sbjct: 34 SGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAY 93
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH--IGSYAEALDVFRQMQMVGIEPDEIS 251
ARLG+ +AR LF+ +P S+ A+++ G A+AL M + S
Sbjct: 94 ARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYS 153
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
S L ACA GE +H ++ I +AL++MY KC A ++FD M
Sbjct: 154 FASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMP 213
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
ER+VVSW+++I +G +A+ LF EM P+++T ++SACA EG
Sbjct: 214 ERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQ 273
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
M + + + LVD+ + GR +A I + MP + S+L+
Sbjct: 274 VHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVS-ETSILTGYAKS 332
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+N+E A + ++ ++ + +L YA++G E+ R+ ++ S+ T
Sbjct: 333 ANVEDAQVVFSQMV---EKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 20 ILQSCENLIELK---KIHTQILK------YLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+L +C N+ +L+ + H +LK + F+ ++D+ G + + +F+
Sbjct: 391 VLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 450
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + +NAMI Y N A++L+++ML PD T+ V+ +C
Sbjct: 451 RMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNEN-----PDSVTMIGVLSACGHS 505
Query: 131 LCPSLGKQ-IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNN 188
G++ H+ G+ ++DL G+ L EA ++ +M + D V W +
Sbjct: 506 GLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWAS 565
Query: 189 LISG-----YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
L+ LG+ R LF+ P + + + + Y +G +AE V R M+
Sbjct: 566 LLGACRLHKNVELGEWTAGR-LFELDPQNS-GPYVLLSNMYAEMGKWAEVFRVRRSMKDR 623
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNHLLRRTV 285
G VS P C+ +E+G ++++ DK H R +
Sbjct: 624 G--------VSKQPGCSW---IEIGRKMNVFLARDKRHPCRNEI 656
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 182/503 (36%), Positives = 282/503 (56%), Gaps = 35/503 (6%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F + +SC N E K+IH K + + ++++ ++ G L A +F ++++
Sbjct: 91 FPSLFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKT 150
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V + MI + A+ L+ +M++ + P++ TL V+ +CA ++
Sbjct: 151 VVSWATMIGVHAQWDQPNEAVRLFDRMMKSEN----VKPNEVTLVNVLTACARARDLAMV 206
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K+IH ++ + G H + L+D+Y KC
Sbjct: 207 KRIHEYIDEHGFGRHVVLNTVLMDVYCKC------------------------------- 235
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G ++ AR LFDK + SW MI+G+ +Y EAL +FR+MQ GI+ D++++ S+L
Sbjct: 236 GCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLL 295
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC LG+LELG+W+H Y K + + AL++MY KCG I A Q+F +M E+DV+
Sbjct: 296 LACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVM 355
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+ +I GLA G+A A+ F EM V P+ ITF+G+L+AC+H GF +EG+ +F+SM
Sbjct: 356 TWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSM 415
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ I+ IEHYG LVD+LGRAGR+ +A +I+ MPM PD + G LL +CR + NLE
Sbjct: 416 SDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEA 475
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A A + LL ++P +G YVLLSNIY +WE+ R R+L+ + M+K PGCS IEV+
Sbjct: 476 AERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHG 535
Query: 497 EVQEFVSGDDTKPFLKDIFWLLE 519
V EFV GD + +I +LE
Sbjct: 536 VVHEFVKGDSSHRQSSEINEMLE 558
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 205/399 (51%), Gaps = 42/399 (10%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCN--SGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+LK+IH Q+L+ L F +K++ C+ G L YA L+F Q+ P + N++IR
Sbjct: 3 QLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRG 62
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
T+ +L+ A+ Y++M+ ++PD++T P + KSC S GKQIH H K
Sbjct: 63 CTDKNLHQEALLFYQEMMVQG-----LIPDRYTFPSLFKSCRN---SSEGKQIHCHSTKL 114
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
G S + +N L+++Y C L+ A KVF++M D+ +V+W +I +A+ Q +A LF
Sbjct: 115 GFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLF 174
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
D+M M+ ++P+E+++V+VL ACA+ L
Sbjct: 175 DRM------------------------------MKSENVKPNEVTLVNVLTACARARDLA 204
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
+ + IH Y D++ R V+ L+++Y KCGC+ A LFD+ E+++ SW+ +I G
Sbjct: 205 MVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHV 264
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+A+ LF EMQ + + +T LL AC H G G + + + I+ +
Sbjct: 265 EDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELG-KWLHAYIKKQRIDVDV 323
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
LVD+ + G ++ A+ + EMP K D W +L+
Sbjct: 324 ALGTALVDMYAKCGSIETAIQVFHEMPEK-DVMTWTALI 361
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 147/328 (44%), Gaps = 43/328 (13%)
Query: 9 SIKELEDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
++K E V +L +C +L +K+IH I ++ + L T ++DV G + A
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLA 241
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF + +E N+F +N MI + + Y A+ L+++M G DK T+ ++
Sbjct: 242 RDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKG-----DKVTMASLLL 296
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+C L LGK +HA++ K + AL+D+Y KC + A +VF EM ++D++
Sbjct: 297 ACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMT 356
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W LI G A GQ + A FD +M + G+
Sbjct: 357 WTALILGLAMCGQAENALQYFD-------------------------------EMHIKGV 385
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGCINQAS 304
+PD I+ V VL AC+ G ++ G + ++ T+ L+++ + G I +A
Sbjct: 386 KPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAE 445
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAH 332
+L M + V+GGL + H
Sbjct: 446 ELIKSM---PMAPDQFVLGGLLGACRIH 470
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 174/499 (34%), Positives = 281/499 (56%), Gaps = 36/499 (7%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F+P+L L + K+IH I++ +S FL + +ID+ D+ A +F Q +
Sbjct: 355 FLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVD 414
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ + AMI Y N + A+ +++ +L++ + + TL V+ +CAGL +LG
Sbjct: 415 IVVCTAMISGYVLNGMNNNALEIFRWLLQER-----MRANSVTLASVLPACAGLAALTLG 469
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K++H H+ K G +A++D+Y KC L AH+ F ++D+D V
Sbjct: 470 KELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVC----------- 518
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
W +MI+ + G EA+D+FRQM M G + D +SI + L
Sbjct: 519 --------------------WNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAAL 558
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA L +L G+ IH + + +ALI+MY KCG ++ A ++FD M E++ V
Sbjct: 559 SACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEV 618
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+++I NHG+ +++LFH M + P+ +TF+ ++SAC H G +EG+ YF M
Sbjct: 619 SWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCM 678
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ I ++EHY C+VDL GRAGRL++A +I MP PDA +WG+LL +CR + N+E+
Sbjct: 679 TEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVEL 738
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A +A +L L+P+++G YVLLSN++A G+WE V ++R L++ + ++K PGCS I+VNN
Sbjct: 739 AEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNN 798
Query: 497 EVQEFVSGDDTKPFLKDIF 515
FV+ D + P I+
Sbjct: 799 TTHMFVAADRSHPQSSQIY 817
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 138/510 (27%), Positives = 219/510 (42%), Gaps = 100/510 (19%)
Query: 12 ELEDRFVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
L + V ILQ+C + L + ++ H Q+L + + L TK++ + G A +
Sbjct: 44 SLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNI 103
Query: 69 FKQVK----EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
F Q++ EP +N MIR +T + A+ Y +ML G LPDK+T P+VI
Sbjct: 104 FYQLRLWCSEP----WNWMIRGFTMMGQFDFALLFYFKML-----GCGTLPDKYTFPYVI 154
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLK-------------------------------SHSI 153
K+C GL +LG+ +H + G + +
Sbjct: 155 KACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGV 214
Query: 154 TENALLDLYGKCDELIEAHKVFEEM----TDRDIVAW----------------------- 186
N +L+ Y K + A VF EM T+ + V +
Sbjct: 215 LWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLV 274
Query: 187 ------------NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
N L++ YA+ G + AR LFD MP T +V+W MISGY G EA
Sbjct: 275 VSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEAS 334
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+F +M ++PD I+ S LP ++ +L G+ IH Y +N + + +ALI++Y
Sbjct: 335 CLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIY 394
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
KC + A ++FDQ D+V + +I G +G + A+ +F + + ++ N +T
Sbjct: 395 FKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLA 454
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG------CLVDLLGRAGRLDQALNI 408
+L ACA GL K H K H G ++D+ + GRLD A
Sbjct: 455 SVLPACA-------GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 507
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+ K DA W S+++SC E A+
Sbjct: 508 FIGISDK-DAVCWNSMITSCSQNGKPEEAI 536
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 191/427 (44%), Gaps = 51/427 (11%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L C + I + ++H ++ L + + ++ + G L A LF +
Sbjct: 251 FACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP 310
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ ++ +N MI Y N A L+ +M+ + + PD T + +
Sbjct: 311 KTDLVTWNGMISGYVQNGFMDEASCLFHEMIS-----ARMKPDSITFSSFLPLLSEGATL 365
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK+IH ++ + G+ ++AL+D+Y KC RD+
Sbjct: 366 RQGKEIHCYIIRNGVSLDVFLKSALIDIYFKC---------------RDV---------- 400
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ AR +FD+ IV TAMISGY G AL++FR + + + +++
Sbjct: 401 ------EMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLA 454
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVLPACA L +L LG+ +H + KN + +A+++MY KCG ++ A Q F + ++
Sbjct: 455 SVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK 514
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-----HTGFWNE 368
D V W+++I + +GK +AI LF +M + ++ LSACA H G
Sbjct: 515 DAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIH 574
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
M + + D E L+D+ + G LD A + + M K + W S++++
Sbjct: 575 AFMMRGAFRSDLFAESA------LIDMYSKCGNLDLACRVFDTMEEKNEVS-WNSIIAAY 627
Query: 429 RTYSNLE 435
+ L+
Sbjct: 628 GNHGRLK 634
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/460 (37%), Positives = 273/460 (59%), Gaps = 12/460 (2%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
DL A F + E +V +NAM+ Y N L + L+ +M+ + I PD+ T
Sbjct: 209 DLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVN-----AGIEPDETTW 263
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
VI +C+ P L + + + ++ + ALLD+Y KC + A ++F+E+
Sbjct: 264 VTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGA 323
Query: 181 -RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
R+ V WN +IS Y R+G + AR LF+ MP +V+W +MI+GY G A A+++F++
Sbjct: 324 YRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKE 383
Query: 240 MQMVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
M + PDE+++VSV+ AC LG+LELG W+ + +N + NA+I MY +CG
Sbjct: 384 MITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCG 443
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ A ++F +M RDVVS++T+I G A HG +AI+L M+ + P+ +TFIG+L+
Sbjct: 444 SMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLT 503
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H G EG F+S+K + I+HY C+VDLLGR G L+ A +E MPM+P A
Sbjct: 504 ACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHA 558
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
++GSLL++ R + +E+ +A L LEP+++GN++LLSNIYA GRW+DV R+R+ +
Sbjct: 559 GVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAM 618
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+ +KKT G S +E ++ +F+ D + DI+ LL
Sbjct: 619 KKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLL 658
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 219/475 (46%), Gaps = 79/475 (16%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS-GGDLAYASLLFKQVKEPNVF 78
I N L+++H QI+ L N+ V +I+ C Y LLF PNVF
Sbjct: 7 IASRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVF 66
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
++ +M+R Y++ + + +++ M G + PD F P +IKS + G
Sbjct: 67 VFTSMLRFYSHLQDHAKVVLMFEHM-----QGCGVRPDAFVYPILIKSAG-----NGGIG 116
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD--RDIVAWNNLISGYARL 196
HAHV K G S + NA++D+Y + + A KVF+E+ D R + WN ++SGY +
Sbjct: 117 FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKW 176
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHI----------------------------- 227
+A+ LFD MP +++WTAM++GY +
Sbjct: 177 ESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYA 236
Query: 228 --GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG---------EWIHMYC- 275
G E L +F +M GIEPDE + V+V+ AC+ G L + I + C
Sbjct: 237 QNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCF 296
Query: 276 ----------------------DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
D+ R +V NA+I Y + G ++ A +LF+ M R
Sbjct: 297 VRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGR 356
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+VV+W+++I G A +G++ AI LF EM K+ P+++T + ++SAC H G G +
Sbjct: 357 NVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELG-NW 415
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
++ I+ I + ++ + R G ++ A + +EM + D + +L+S
Sbjct: 416 VVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-DVVSYNTLISG 469
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 181/490 (36%), Positives = 281/490 (57%), Gaps = 42/490 (8%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLV-TKMIDVCNSGGDLA---YASLLFKQVKEP 75
++ C +L ELK+I +K Q+N V TK+I+ C S +A +A +F ++ +P
Sbjct: 41 LIPKCTSLRELKQIQAYTIK--THQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQP 98
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
++ L+N M R Y AI L Q+L S +LPD +T ++K+CA L
Sbjct: 99 DIVLFNTMARGYARFDDPLRAILLCSQVL-----CSGLLPDDYTFSSLLKACARLKALEE 153
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
GKQ+H K G+ + L+++Y C+++
Sbjct: 154 GKQLHCLAVKLGVGDNMYVCPTLINMYTACNDV--------------------------- 186
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
AR +FDK+ +V++ A+I+ EAL +FR++Q G++P +++++
Sbjct: 187 ----DAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVA 242
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L +CA LG+L+LG WIH Y KN + + ALI+MY KCG ++ A +F M RD
Sbjct: 243 LSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDT 302
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
+WS +I A HG +AI + EM++ KV P++ITF+G+L AC+HTG EG YF S
Sbjct: 303 QAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHS 362
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M ++ I I+HYGC++DLLGRAGRL++A I+E+P+KP +W +LLSSC ++ N+E
Sbjct: 363 MTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVE 422
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A + ++ + L+ G+YV+LSN+ A++GRW+DV+ +RK++ K K PGCS IEVN
Sbjct: 423 MAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVN 482
Query: 496 NEVQEFVSGD 505
N V EF SGD
Sbjct: 483 NVVHEFFSGD 492
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 148/289 (51%), Gaps = 8/289 (2%)
Query: 156 NALLDLYGKCDEL-----IEAHKVFEEMTDRDIVA-WNNLISGYARLGQMKKARMLFDKM 209
+++L L KC L I+A+ + + ++ N + + M A +FDK+
Sbjct: 36 SSILSLIPKCTSLRELKQIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKI 95
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P IV + M GY A+ + Q+ G+ PD+ + S+L ACA+L +LE G+
Sbjct: 96 PQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGK 155
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
+H K + +C LI MY C ++ A ++FD++ E VV+++ +I A +
Sbjct: 156 QLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNS 215
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+ ++A+ LF E+Q + P D+T + LS+CA G + G + +K++ + ++
Sbjct: 216 RPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKN-GFDQYVKVN 274
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
L+D+ + G LD A+++ ++MP + D + W +++ + T+ + A+
Sbjct: 275 TALIDMYAKCGSLDDAVSVFKDMPRR-DTQAWSAMIVAYATHGHGSQAI 322
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 166/357 (46%), Gaps = 42/357 (11%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C L L K++H +K + + ++ +I++ + D+ A +F ++
Sbjct: 138 FSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIG 197
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
EP V YNA+I + N A+ L++++ S + P T+ + SCA L
Sbjct: 198 EPCVVAYNAIITSCARNSRPNEALALFRELQE-----SGLKPTDVTMLVALSSCALLGAL 252
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+ IH +V K G + AL+D+Y KC L +A VF++M RD AW+ +I Y
Sbjct: 253 DLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAY 312
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A TH G ++A+ + R+M+ ++PDEI+ +
Sbjct: 313 A------------------------------TH-GHGSQAISMLREMKKAKVQPDEITFL 341
Query: 254 SVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-V 311
+L AC+ G +E G E+ H + ++ +I++ + G + +A + D++ +
Sbjct: 342 GILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPI 401
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ + W T++ ++HG A + + L + ++ L + CA G W++
Sbjct: 402 KPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELD-DSHGGDYVILSNLCARNGRWDD 457
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 27/241 (11%)
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI-- 300
+EP SI+S++P C L L + I Y K H TV+ LI I
Sbjct: 29 AALEPPSSSILSLIPKCTSLREL---KQIQAYTIKTHQNNPTVL-TKLINFCTSNPTIAS 84
Query: 301 -NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ A ++FD++ + D+V ++T+ G A +AI L ++ + P+D TF LL A
Sbjct: 85 MDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKA 144
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKI----EHYGC--LVDLLGRAGRLDQALNIIEEMP 413
CA EG K+ H + K+ Y C L+++ +D A + +++
Sbjct: 145 CARLKALEEG-------KQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIG 197
Query: 414 MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPEDTGNYVLLSNI----YAKHGR 467
+P + ++++SC S A+ L L+P D V LS+ GR
Sbjct: 198 -EPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGR 256
Query: 468 W 468
W
Sbjct: 257 W 257
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 182/492 (36%), Positives = 284/492 (57%), Gaps = 27/492 (5%)
Query: 48 LVTKMIDVCNSGGD-----LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102
LV + D SG + L A +FK ++ P+ L+N MIRA+ + +I + Q
Sbjct: 57 LVFALGDFLPSGSNSSAHHLLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQ 116
Query: 103 ML-RDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI-TENALLD 160
ML D R PD T F++ +C L G+Q+H+ V G S ++ + L++
Sbjct: 117 MLLTDSR------PDAHTYSFLLAACTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVN 170
Query: 161 LY-----GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
Y G+ L A KVF++M++R++V WN++++GY R G + AR +F +MP +V
Sbjct: 171 FYAAVVGGEGAALASARKVFDDMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVV 230
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
SWT MISGY G +AL++F QM+ G+E D++ +++ L ACA+LG L++G WIH Y
Sbjct: 231 SWTTMISGYAKNGKCKQALNLFDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHSYI 290
Query: 276 DKNHLL--RRTVIC--NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
+ +R ++ NALI MY CG I++A ++F M ER VSW+++I A G A
Sbjct: 291 QDTFVGSNQRVLVSLNNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYA 350
Query: 332 HKAIHLFHEMQRL---KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
+ +F MQRL + P+ ITFIG+L AC+H G +EG F M + I+ +IEH
Sbjct: 351 QAVLEIFRSMQRLGTSEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEH 410
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV-L 447
YGC+VDLL RAG LD+A +I MP+KP+ +WG+LL CR Y N E+A + + L+
Sbjct: 411 YGCMVDLLSRAGFLDEAQELIATMPVKPNNAVWGALLGGCRFYRNAELASLVSQKLVAEP 470
Query: 448 EPEDTGNYV-LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
+P+ Y+ LL+ +YA +W+DV+ +R+ + + +KK G S +++N + V+GD
Sbjct: 471 DPDKAAGYLSLLAQVYASAEKWQDVATVRQKMVAMGVKKPAGQSWVQINEVFHDSVAGDR 530
Query: 507 TKPFLKDIFWLL 518
T I+ +L
Sbjct: 531 THENTSSIYEML 542
>gi|334187520|ref|NP_001190262.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
gi|223635618|sp|P0C8Q7.1|PP369_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08305
gi|332003897|gb|AED91280.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
Length = 534
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 183/520 (35%), Positives = 305/520 (58%), Gaps = 16/520 (3%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYN 81
C+++ EL KIHT ++ LS+ V++ + +S GD+ YA ++ +P + +N
Sbjct: 18 CKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWN 77
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
+IR ++N+ +I++Y QMLR +LPD T PF++KS + L LG +H
Sbjct: 78 FVIRGFSNSRNPEKSISVYIQMLRFG-----LLPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
V K GL+ N L+ +YG + A K+F+EM +++V WN+++ YA+ G +
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACA 260
AR++FD+M +V+W++MI GY G Y +AL++F QM +G + +E+++VSV+ ACA
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 252
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF--DQMVERDVVSW 318
LG+L G+ +H Y HL ++ +LI+MY KCG I A +F + E D + W
Sbjct: 253 HLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 312
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ +IGGLA+HG +++ LFH+M+ K+ P++ITF+ LL+AC+H G E +F S+K
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK- 371
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+ E K EHY C+VD+L RAG + A + I EMP+KP + G+LL+ C + NLE+A
Sbjct: 372 ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAE 431
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
+ L+ L+P + G YV L+N+YA + ++ MR+ + K +KK G S+++++
Sbjct: 432 TVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTR 491
Query: 499 QEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYED 538
F++ D T I+ +L+L + +D+ Y+D
Sbjct: 492 HRFIAHDKTHFHSDKIYAVLQLTGAWMN-----LDVDYDD 526
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 301/533 (56%), Gaps = 17/533 (3%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L +C +L+ ++H + + + + T ++D+ A +F +
Sbjct: 154 FASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMP 213
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E NV +N++I Y N G A+ L+ +M+ TG PD+ TL V+ +CAGL
Sbjct: 214 ERNVVSWNSLITCYEQNGPVGEALVLFVEMMA---TG--FFPDEVTLSSVMSACAGLAAE 268
Query: 134 SLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
G+Q+HAH+ K L+ + NAL+D+Y KC EA +F+ M R +V+ ++++G
Sbjct: 269 REGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAG 328
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA+ ++ A+++F +M +++W +I+ Y G EA+ +F Q++ I P +
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTY 388
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLL------RRTVICNALIEMYIKCGCINQASQL 306
+VL AC + L+LG+ H++ K + N+L++MY+K G I+ +++
Sbjct: 389 GNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKV 448
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F++M RD VSW+ +I G A +G+A A+HLF M P+ +T IG+LSAC H+G
Sbjct: 449 FERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLV 508
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+EG +F M DH I +HY C+VDLLGRAG L +A +I++MP +PD+ +W SLL
Sbjct: 509 DEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLG 568
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+CR + N+E+ L L+PE++G YVLLSN+YA+ G+W DV R+R+ ++ + + K
Sbjct: 569 ACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQ 628
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539
PGCS IE+ +++ F++ D+ P +I L ++ + R ID + +D+
Sbjct: 629 PGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEMCRTS--IDGIDDDL 679
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 198/482 (41%), Gaps = 119/482 (24%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL----------------- 62
+L+S +L + H +LK ++ FL+ ++ G L
Sbjct: 26 LLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFS 85
Query: 63 ------AYASL--------LFKQVKEPNVFLYNAMIRAYTNNHL--YGLAINLYKQMLRD 106
AYA L LF+ + +P+ YNA++ A + G A+ M D
Sbjct: 86 YNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHAD 145
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
+L + ++ + +CA G+Q+H V + AL+D+Y KC+
Sbjct: 146 ----DFVL-NAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCE 200
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
++A +VF+ M +R++V+WN+LI+ Y + G +
Sbjct: 201 RPVDARRVFDAMPERNVVSWNSLITCYEQNGPV--------------------------- 233
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT-V 285
EAL +F +M G PDE+++ SV+ ACA L + G +H + K LR V
Sbjct: 234 ----GEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMV 289
Query: 286 ICNALIEMYIKCG------CI-------------------------NQASQLFDQMVERD 314
+ NAL++MY KCG CI A +F QMVE++
Sbjct: 290 LNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKN 349
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC-----------AHT 363
V++W+ +I A +G+ +AI LF +++R + P T+ +L+AC AH
Sbjct: 350 VIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHV 409
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
EG + D E + LVD+ + G +D + E M + D W +
Sbjct: 410 HVLKEGFRF------DFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR-DNVSWNA 462
Query: 424 LL 425
++
Sbjct: 463 MI 464
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 166/358 (46%), Gaps = 8/358 (2%)
Query: 133 PSLGKQIHAHVC--KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
PSL AH C K + + N L+ Y + L EA +VF+ + R+ ++N L+
Sbjct: 31 PSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALL 90
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH--IGSYAEALDVFRQMQMVGIEPD 248
S YARLG+ +AR LF+ +P S+ A+++ G +AL M +
Sbjct: 91 SAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLN 150
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
S S L ACA L GE +H ++ I AL++MY KC A ++FD
Sbjct: 151 AYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFD 210
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M ER+VVSW+++I +G +A+ LF EM P+++T ++SACA E
Sbjct: 211 AMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAERE 270
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G M + + + LVD+ + GR +A I + MP + S+L+
Sbjct: 271 GRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVS-ETSILAGY 329
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+N+E A + ++ ++ + +L YA++G E+ R+ ++ S+ T
Sbjct: 330 AKSANVEDAQVVFSQMV---EKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 305/534 (57%), Gaps = 20/534 (3%)
Query: 10 IKELEDRFVPILQSCENLIELKKIHTQIL-KYLLS----QSNFLVTKMIDVC-------N 57
I L +++ C+ + +L ++H Q K LLS S ++TK++ +
Sbjct: 23 IYNLSHSIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKS 82
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
S L YA F ++ P+ F YN +IR +T + A++ + QM R + PD
Sbjct: 83 SFSLLHYAVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFS-----VPPDF 137
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
+ PF +K+CA L SL + +H+ V KFG S N+L+ +Y D L A +VF+E
Sbjct: 138 HSYPFALKACAHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDE 197
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA-EALDV 236
+DRD+V++N L+ G+ + G+ KAR +FD MP VSW ++I+GY GSY EA+ +
Sbjct: 198 SSDRDVVSYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQ-GSYCNEAIGL 256
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
F M + +EPD I++VS L ACAQLG LE G+ IH Y KN + + + L++ Y K
Sbjct: 257 FDLMMGLKLEPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAK 316
Query: 297 CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
GCI+ A ++F+ ++ +++W+ ++ G+A HG +H ++ F M + P+ I+F+G+
Sbjct: 317 SGCIDTAIKVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGV 376
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
L C+H G +E FD M+ + + +++HYGC+ DLL RAG + +A+ + + +PM
Sbjct: 377 LVGCSHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGG 436
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
D +W LL CR + N+EIA A + ++ L+PED G Y +L+N+YA RWEDV ++R+
Sbjct: 437 DIFVWSGLLGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRR 496
Query: 477 LIRS-KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAK 529
+ S +++KK G S I++ EF++G+ +I+ +L+ + HQ
Sbjct: 497 SMSSNRAVKKNAGRSSIQLGGLTHEFLAGESLHAQSSEIYMVLDGIREHQSEGS 550
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 199/579 (34%), Positives = 309/579 (53%), Gaps = 79/579 (13%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
L +IH +++ L + FL+TK+++ ++ G + YA LF + P+VF++NA+IR+Y+
Sbjct: 72 LDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSR 131
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
N++Y + +Y+ M TG + PD FT P+V+K+C LL L IH + K+G
Sbjct: 132 NNMYRDTVEMYRWM---RWTG--VHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFG 186
Query: 150 SHSITENALLDL-------------------------------YGKCDELIEAHKVFEEM 178
S +N L+ L Y + + +EA ++F +M
Sbjct: 187 SDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQM 246
Query: 179 -------------------TDRDIVAWNNLISG--------------------YARLGQM 199
TD D + I G YA+ G +
Sbjct: 247 RNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLV 306
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
A+ FD+M T ++ W AMISGY G EA+++F M I+PD +++ S + A
Sbjct: 307 TVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLAS 366
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
AQ+GSLEL +W+ Y K++ + +LI+MY KCG + A ++FD+ ++DVV WS
Sbjct: 367 AQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWS 426
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I G HG+ +AI+L+H M++ V PND+TFIGLL+AC H+G EG F MK D
Sbjct: 427 AMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMK-D 485
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
I + EHY C+VDLLGRAG L +A I ++P++P +WG+LLS+C+ Y + +
Sbjct: 486 FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEY 545
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A L L+P +TG+YV LSN+YA W+ V+ +R L+R K + K G S+IE+N ++Q
Sbjct: 546 AANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQ 605
Query: 500 EFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYED 538
F GD + P K+IF L+ L + R K+V + Y +
Sbjct: 606 AFHVGDKSHPMAKEIFDELQRL---ERRLKEVGFVPYTE 641
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 133/300 (44%), Gaps = 39/300 (13%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMI 84
++L + + IH ++K L L+ + G + A F Q+K NV ++NAMI
Sbjct: 269 DDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMI 328
Query: 85 RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
Y N A+NL+ M+ I PD T+ + + A + L + + +V
Sbjct: 329 SGYAKNGHAEEAVNLFHYMISRN-----IKPDSVTVRSAVLASAQVGSLELAQWMDDYVS 383
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
K S +L+D+Y KC + A +VF+ +D+D+V W+ +I GY GQ
Sbjct: 384 KSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQ------ 437
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
W EA++++ M+ G+ P++++ + +L AC G
Sbjct: 438 -----------GW--------------EAINLYHVMKQAGVFPNDVTFIGLLTACNHSGL 472
Query: 265 LELGEWIHMYCDKN-HLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVI 322
++ G W +C K+ ++ R + ++++ + G + +A ++ +E V W ++
Sbjct: 473 VKEG-WELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALL 531
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 183/501 (36%), Positives = 279/501 (55%), Gaps = 62/501 (12%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
L SC + ELK+ H+QI++ LS N + ++I C ++ + L Q+ +F+Y
Sbjct: 27 LDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCA----ISKSGYLRWQLARNCIFMY 82
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
+ M L+K + P+KFT P +I++C GKQIH
Sbjct: 83 SRM---------------LHKS----------VSPNKFTYPPLIRACCIDYAIEEGKQIH 117
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
AHV KFG + D + NNLI Y ++
Sbjct: 118 AHVLKFGFGA-------------------------------DGFSLNNLIHMYVNFQSLE 146
Query: 201 KARMLFDKMPYT--TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+AR +FD MP VSW AMI+ Y EA +F +M++ + D+ S+L A
Sbjct: 147 QARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSA 206
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
C LG+LE G+WIH Y +K+ + + + +I+MY KCGC+ +AS++F+++ ++ + SW
Sbjct: 207 CTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSW 266
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ +IGGLA HGK AI LF EM+R V P+ ITF+ +LSACAH+G EG YF M
Sbjct: 267 NCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTE 326
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
++ +EH+GC+VDLLGRAG L++A +I EMP+ PDA + G+L+ +CR + N E+
Sbjct: 327 VLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGE 386
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
+ ++ LEP ++G YVLL+N+YA GRWEDV+++RKL+ + +KK PG S+IE + V
Sbjct: 387 QIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGV 446
Query: 499 QEFVSGDDTKPFLKDIFWLLE 519
EF++G P K+I+ L+
Sbjct: 447 DEFIAGGRAHPQAKEIYAKLD 467
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 171/375 (45%), Gaps = 44/375 (11%)
Query: 1 MAARIGALSIKELEDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN 57
M +R+ S+ + + P++++C + E K+IH +LK+ F + +I +
Sbjct: 81 MYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYV 140
Query: 58 SGGDLAYASLLFKQV--KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP 115
+ L A +F + ++ N +NAMI AY ++ A L+ +M R +++L
Sbjct: 141 NFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRM----RLENVVL- 195
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
DKF ++ +C GL GK IH ++ K G++ S ++D+Y KC L +A +VF
Sbjct: 196 DKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVF 255
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
E+ + I +WN +I G A G+ + A++
Sbjct: 256 NELPQKGISSWNCMIGGLAMHGKGEA-------------------------------AIE 284
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMY 294
+F++M+ + PD I+ V+VL ACA G +E G+ Y + L+ + ++++
Sbjct: 285 LFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLL 344
Query: 295 IKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
+ G + +A +L ++M V D ++G HG + ++ L+ P N +
Sbjct: 345 GRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELE-PHNSGRY 403
Query: 354 IGLLSACAHTGFWNE 368
+ L + A G W +
Sbjct: 404 VLLANLYASAGRWED 418
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 197/569 (34%), Positives = 296/569 (52%), Gaps = 69/569 (12%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLF-KQVKEPNVF 78
+LQ C L +IH IL+ + + ++TK I C +A LF + + F
Sbjct: 8 LLQRCRTRKTLLQIHALILRNAIDANVNILTKFITTCGQLSSTRHARHLFDNRSHRGDTF 67
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
L N+MI+++ A LYK + R+ + +PD FT + K CA + G +
Sbjct: 68 LCNSMIKSHVVMRQLADAFTLYKDLRRE----TCFVPDNFTFTVLAKCCALRMAVWEGLE 123
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR--- 195
H HV K G AL+D+Y K L A KVF +M DR +V+W LI GY R
Sbjct: 124 THGHVVKIGFCFDMYVSTALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGYVRRGD 183
Query: 196 ----------------------------LGQMKKARMLFDKMPYTTIVSWTAMISGYTH- 226
+G M+ AR LFD+MP ++SWT+MI GY +
Sbjct: 184 MGNAWFLFKLMPGRDSAAFNLLIDGYVKVGDMESARSLFDEMPERNVISWTSMIYGYCNN 243
Query: 227 ------------------------IGSYA------EALDVFRQMQMVGI-EPDEISIVSV 255
IG Y EAL +FR++Q + EP+E+++VS+
Sbjct: 244 GDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALKLFRELQSSTVFEPNEVTVVSI 303
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
LPA A LG+LELGEW+H + + L +C +L++MY+KCG I++A ++F ++ +++
Sbjct: 304 LPAIATLGALELGEWVHRFVQRKKLDAAVNVCTSLVDMYLKCGEISKARKVFSEIPKKET 363
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
+W+ +I G A +G A +A+ F EMQ+ + PNDIT G+LSAC+H G EG F +
Sbjct: 364 ATWNALINGFAMNGLASEALEAFSEMQQEGIKPNDITMTGVLSACSHGGLVEEGKGQFKA 423
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M + + KIEHYGCLVDLLGRAG LD+A N+I+ MP + + I S +C +++
Sbjct: 424 MI-ESGLSPKIEHYGCLVDLLGRAGCLDEAENLIKSMPFEANGIILSSFSFACGFSNDVT 482
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
A + + +EP + G YV++ N+YA RW+DV + L+R + KK G S IEV+
Sbjct: 483 RAQRVLNQAVNMEPGNNGIYVMMRNLYAMEERWKDVKEINGLMRRRGAKKEVGSSAIEVD 542
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELLALH 524
+ V EF+SG P L I ++ L +H
Sbjct: 543 SRVSEFISGGIAHPQLDVIESVIGQLWIH 571
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 187/517 (36%), Positives = 282/517 (54%), Gaps = 12/517 (2%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
+IH K F+ T +I + S + A LLF ++ P+ +N +I Y N
Sbjct: 142 EIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNG 201
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
Y A+ L++ M S + PD L V+ +C S G+ IH V G
Sbjct: 202 HYDDALRLFEDM-----RSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAID 256
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
S + AL+++Y C + A K+++ ++ + ++ ++SGYA+LG +K AR +FD+M
Sbjct: 257 SHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIE 316
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI 271
+V W+AMISGY EAL +F +M PD+I+++SV+ AC+ +G+L WI
Sbjct: 317 RDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWI 376
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H Y D++ R + NALI+MY KCG + +A ++F+ M ++V+SWS++I A HG A
Sbjct: 377 HTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNA 436
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
AI LF M+ + + PN +TFIG+L AC H G EG F SM +H I EHYGC
Sbjct: 437 DSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGC 496
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VDL RA L +A+ +IE MP P+ IWGSL+S+C+ + E+ A + LL LEP+
Sbjct: 497 MVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDH 556
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV-------SG 504
G V+LSNIYAK RW DV +RK + K + K S IE+NN+V F+
Sbjct: 557 DGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQS 616
Query: 505 DDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDIGE 541
D+ L ++ L+L+ + +ID+ ED E
Sbjct: 617 DEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKE 653
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 198/461 (42%), Gaps = 74/461 (16%)
Query: 30 LKKIHTQILKYLLS--QSNFLVTKM----IDVCNSGGDLAYASLLFKQVKEPNVFLYNAM 83
LK+IH QIL + +N L++K+ + +S L YA +F Q+ P+ N +
Sbjct: 32 LKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQL 91
Query: 84 IRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHV 143
+R + + I LY + R + D+F+ P ++K+ + + + G +IH
Sbjct: 92 LRHLSRSSFPEKTIFLYHNL----RAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLA 147
Query: 144 CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKAR 203
K G + L+ +Y C +++A +F++M D VAWN +I GY + G
Sbjct: 148 SKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGH----- 202
Query: 204 MLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLG 263
Y +AL +F M+ ++PD + + +VL AC G
Sbjct: 203 --------------------------YDDALRLFEDMRSSDMKPDSVILCTVLSACGHAG 236
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ------------------ 305
+L G IH + N + + ALI MY CG ++ A +
Sbjct: 237 NLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLS 296
Query: 306 -------------LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
+FDQM+ERD+V WS +I G A + +A+ LF EM + + P+ IT
Sbjct: 297 GYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQIT 356
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
+ ++SAC+H G + + R + L+D+ + G L +A + E M
Sbjct: 357 MLSVISACSHVGALAQANWIHTYVDRS-GFGRALSVNNALIDMYAKCGNLVKAREVFENM 415
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
P K + W S++++ + N + A+ + + E G
Sbjct: 416 PRK-NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNG 455
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 255/411 (62%), Gaps = 5/411 (1%)
Query: 115 PDKFTLPFVIKSCAG----LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIE 170
P+ TL V+ +CAG L L +HA K + + L Y
Sbjct: 66 PNDVTLLTVLSACAGDSSSALARPLALSLHALAVKL-FPCNLLLCTCLARFYLASRLPHL 124
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
A K+F+ M DR +V +N +I+G R G + AR +FD+MP VSWTA+I G G +
Sbjct: 125 AIKLFDSMPDRSVVTYNTMITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRH 184
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
EA+D F M G+EPD +++V+ + ACA++G+L LG W+H + L + N+L
Sbjct: 185 DEAIDCFHSMLRDGVEPDYVTLVAAISACAEVGALGLGMWVHRFVVDKRLEHNVRVANSL 244
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND 350
I+MY +CG ++ A Q+F ++ +R VVSW+++I G A +G+ A+ F M+R P+
Sbjct: 245 IDMYARCGQVDFARQVFGRIRKRTVVSWNSMIVGFAANGQYADAVEHFEAMRREGFKPDT 304
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
+TF G+L+AC+H G +EGL Y+D+M+ +H I ++EHYGC+VDLLGRAGRL +A+ ++E
Sbjct: 305 VTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAARMEHYGCVVDLLGRAGRLGEAMRVVE 364
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
MPM+P+ + G+LL+ CR + ++++A M+HLL +P NYVLLSNIYA G+W
Sbjct: 365 SMPMRPNEVVLGALLAGCRMHGDVDLAEQLMQHLLEQDPGGDSNYVLLSNIYAAVGKWGG 424
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
++R L++S+ +KK PG S +E++ EV EFV GD + P +++F +L LL
Sbjct: 425 AGKVRSLMKSRGVKKRPGQSTVEIDGEVHEFVCGDRSHPQAREVFEVLGLL 475
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 15/259 (5%)
Query: 176 EEMTDRDIVAWNNLISGYARLGQMK------KARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+ RD+V+W + I+ AR G ++ A + P V+ ++S S
Sbjct: 24 RRLPPRDVVSWTSAIARPAREGDLQGAAAALSAMLSSPAAPPPNDVTLLTVLSACAGDSS 83
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVIC 287
A A + + + ++ +++ C L L + K + + R+V+
Sbjct: 84 SALARPLALSLHALAVKLFPCNLL----LCTCLARFYLASRLPHLAIKLFDSMPDRSVVT 139
Query: 288 -NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
N +I ++ G + A ++FD+M D VSW+ +I G +G+ +AI FH M R V
Sbjct: 140 YNTMITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGV 199
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
P+ +T + +SACA G G M+ D +EH + L+D+ R G++D A
Sbjct: 200 EPDYVTLVAAISACAEVGALGLG-MWVHRFVVDKRLEHNVRVANSLIDMYARCGQVDFAR 258
Query: 407 NIIEEMPMKPDAKIWGSLL 425
+ + K W S++
Sbjct: 259 QVFGRI-RKRTVVSWNSMI 276
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H ++ L + + +ID+ G + +A +F ++++ V +N+MI + N
Sbjct: 225 VHRFVVDKRLEHNVRVANSLIDMYARCGQVDFARQVFGRIRKRTVVSWNSMIVGFAANGQ 284
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLLCPSLGKQIHAHVCKFGLKS 150
Y A+ ++ M R+ PD T V+ +C AGL L + A + G+ +
Sbjct: 285 YADAVEHFEAMRREG-----FKPDTVTFTGVLTACSHAGLTDEGL-RYYDAMRTEHGIAA 338
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNNLISGYARLGQMKKARMLFDKM 209
++DL G+ L EA +V E M R + V L++G G + A L +
Sbjct: 339 RMEHYGCVVDLLGRAGRLGEAMRVVESMPMRPNEVVLGALLAGCRMHGDVDLAEQLMQHL 398
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 184/509 (36%), Positives = 294/509 (57%), Gaps = 52/509 (10%)
Query: 17 FVPILQSCENLIE---------LKKIHTQILKYLLSQSN-----FLVTKMIDVCNSGGDL 62
+P+++ C NL++ L++IH +++ +S S+ L+ ++ + S +
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSL-PSPPPM 69
Query: 63 AYASLLFKQVKEP-NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
+YA +F ++++P NVF++N +IR Y A +LY++M R L+ PD T P
Sbjct: 70 SYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREM----RVSGLVEPDTHTYP 125
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
F+IK+ + LG+ IH+ V + G S +N+LL LY C
Sbjct: 126 FLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC---------------- 169
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
G + A +FDKMP +V+W ++I+G+ G EAL ++ +M
Sbjct: 170 ---------------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN 214
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
GI+PD +IVS+L ACA++G+L LG+ +H+Y K L R N L+++Y +CG +
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE 274
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSAC 360
+A LFD+MV+++ VSW+++I GLA +G +AI LF M+ + + P +ITF+G+L AC
Sbjct: 275 EAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC 334
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
+H G EG YF M+ ++ IE +IEH+GC+VDLL RAG++ +A I+ MPM+P+ I
Sbjct: 335 SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 394
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
W +LL +C + + ++A A +L LEP +G+YVLLSN+YA RW DV ++RK +
Sbjct: 395 WRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLR 454
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
+KK PG SL+EV N V EF+ GD + P
Sbjct: 455 DGVKKVPGHSLVEVGNRVHEFLMGDKSHP 483
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 301/544 (55%), Gaps = 44/544 (8%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F+ + + LIE K+ H + L N L + +I+ + G + A L+F ++ E +
Sbjct: 289 FLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKD 348
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +N +I +Y +H G A+N+ M R+ +L D TL ++ + A LG
Sbjct: 349 VVTWNLLISSYVQHHQVGKALNMCHLM----RSENLRF-DSVTLSSILSASAVTSNIKLG 403
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K+ H + + L+S + N+++D+Y KC+ + +A KVF+ T+RD+V WN L++ YA++
Sbjct: 404 KEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQV 463
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI-- 250
G +A LF +M + ++ +SW ++I G+ G EA D+F QMQ +G +P+ I
Sbjct: 464 GLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITW 523
Query: 251 ---------------------------------SIVSVLPACAQLGSLELGEWIHMYCDK 277
SI SVL AC + SL G IH + +
Sbjct: 524 TTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITR 583
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + +L++MY KCG I++A ++F M +++ ++ +I A HG+A +A+ L
Sbjct: 584 HEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALAL 643
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F +Q+ + P+ ITF +LSAC+H G NEGL F M H++ +EHYGC+V LL
Sbjct: 644 FKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLS 703
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
R G LD+AL +I MP +PDA I GSLL++CR + +E+ +HL LEP ++GNYV
Sbjct: 704 RCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVA 763
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWL 517
LSN YA GRW +VS MR L++ + ++K PGCS I+ ++ FV+GD + P ++I+ +
Sbjct: 764 LSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAM 823
Query: 518 LELL 521
L +L
Sbjct: 824 LAML 827
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 196/416 (47%), Gaps = 49/416 (11%)
Query: 20 ILQSC---ENLIELKKIHTQILKY--LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
+LQ C L ++IH +ILK +++ ++ TK++ A LF +++
Sbjct: 85 LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRV 144
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
NVF + A++ A+ + +M + + PD F LP V+K+C L
Sbjct: 145 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENG-----VFPDNFVLPNVLKACGSLQLIG 199
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
LGK +H +V K G + ++L+D+YGKC
Sbjct: 200 LGKGVHGYVLKMGFGACVFVSSSLVDMYGKC----------------------------- 230
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
G ++ AR +FD M +V+W +MI GY G EA+DVF M++ GIEP +++ S
Sbjct: 231 --GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVAS 288
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
L A A L +L G+ H N L ++ +++I Y K G I A +F +M+E+D
Sbjct: 289 FLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKD 348
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG---FWNEGLM 371
VV+W+ +I H + KA+++ H M+ + + +T +LSA A T EG
Sbjct: 349 VVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHC 408
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
Y ++R+ +E + ++D+ + R+D A + + + D +W +LL++
Sbjct: 409 Y--CIRRN--LESDVVVANSIIDMYAKCERIDDARKVFDSTTER-DLVLWNTLLAA 459
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 232/497 (46%), Gaps = 57/497 (11%)
Query: 3 ARIGALSIKE---LEDRFV--PILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMID 54
A +G + ++E D FV +L++C +L + K +H +LK F+ + ++D
Sbjct: 166 ALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVD 225
Query: 55 VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL 114
+ G L A +F + E NV +N+MI Y N L AI+++ M + I
Sbjct: 226 MYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEG-----IE 280
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P + T+ + + A L GKQ HA A+L+
Sbjct: 281 PTRVTVASFLSASANLDALIEGKQGHA--------------IAILN-------------- 312
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
D D + +++I+ Y+++G ++ A ++F +M +V+W +IS Y +AL
Sbjct: 313 ---SLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKAL 369
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
++ M+ + D +++ S+L A A +++LG+ H YC + +L V+ N++I+MY
Sbjct: 370 NMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMY 429
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
KC I+ A ++FD ERD+V W+T++ A G + +A+ LF++MQ VPPN I++
Sbjct: 430 AKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWN 489
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP- 413
++ G NE F M+ + + + L+ L ++G +A+ ++M
Sbjct: 490 SVILGFLRNGQVNEAKDMFSQMQ-SLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQE 548
Query: 414 --MKPDAKIWGSLLSSCRTYSNL----EIAVIAMEHLLVLE-PEDTGNYVLLSNIYAKHG 466
++P S+L +C +L I H L P T L ++YAK G
Sbjct: 549 AGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATS----LVDMYAKCG 604
Query: 467 RWEDVSRMRKLIRSKSM 483
++ ++ ++ SK +
Sbjct: 605 SIDEAKKVFHMMSSKEL 621
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 272/461 (59%), Gaps = 38/461 (8%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G +A+A L+F Q+ P+ F+YN +IR + A++LY +MLR + PDK T
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGG-GGVRPDKLT 84
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI---------- 169
PFV+++C + G Q+HAHV K G +S + +NAL+ ++ C L
Sbjct: 85 FPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRA 144
Query: 170 ---------------------EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
A +F+E +D+V+WN +I+ YA+ G M AR LFD+
Sbjct: 145 REDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQ 204
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+P +VSW MISGY GS+ AL++F QMQ +G +PD ++++S+L ACA G L++G
Sbjct: 205 VPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVG 264
Query: 269 EWIHMYCDKNHLLRRT----VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
+ +H + + R V+ NALI+MY KCG + A ++F M ++DV +W++++GG
Sbjct: 265 QRLH--SSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGG 322
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA HG ++I +F +M + KV P++ITF+ +L AC+H G ++G +F+ M+ + +E
Sbjct: 323 LALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEP 382
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
I+HYGC+VD+LGRAG L +A I+ M +P++ IW +LLS+CR + +E+A A L
Sbjct: 383 NIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQL 442
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
L +++G+YVLLSNIYA G W +MRKL+ + K
Sbjct: 443 LKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 49/323 (15%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT--NNHLYGLAINLYKQMLRDPRT 109
MI GD+A A LF QV E +V +N MI Y +HL+ A+ L++QM R
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLH--ALELFEQMQRMGEK 242
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH--SITENALLDLYGKCDE 167
PD T+ ++ +CA +G+++H+ + ++ + NAL+D+Y KC
Sbjct: 243 -----PDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGS 297
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+ AH+VF M D+D+ WN+++ G A G +
Sbjct: 298 MKSAHEVFWSMRDKDVSTWNSIVGGLALHGHV---------------------------- 329
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVI 286
E++D+F +M + PDEI+ V+VL AC+ G ++ G E+ ++ K +
Sbjct: 330 ---LESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKH 386
Query: 287 CNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+++M + G + +A + D M E + V W T++ HG+ A H ++ + +
Sbjct: 387 YGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKAR 446
Query: 346 VPPNDIT--FIGLLSACAHTGFW 366
ND + ++ L + A G W
Sbjct: 447 ---NDESGDYVLLSNIYASVGEW 466
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/463 (39%), Positives = 278/463 (60%), Gaps = 11/463 (2%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFT 119
DLA A F+Q+ E ++ +N+MI + N Y L A++++ +MLRD SL+ PD+FT
Sbjct: 229 DLAMAQ--FEQMAERDIVTWNSMISGF-NQRGYDLRALDIFSKMLRD----SLLSPDRFT 281
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L V+ +CA L +GKQIH+H+ G I NAL+ +Y +C + A ++ E+
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 180 DRD--IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
+D I + L+ GY +LG M +A+ +F + +V+WTAMI GY GSY EA+++F
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
R M G P+ ++ ++L + L SL G+ IH K+ + + NALI MY K
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
G I AS+ FD + ERD VSW+++I LA HG A +A+ LF M + P+ IT++G+
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
SAC H G N+G YFD MK I + HY C+VDL GRAG L +A IE+MP++P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
D WGSLLS+CR + N+++ +A E LL+LEPE++G Y L+N+Y+ G+WE+ +++RK
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
++ +KK G S IEV ++V F D T P +I+ ++
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMK 684
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 198/427 (46%), Gaps = 42/427 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+ F Q+ + + + MI Y N Y AI + M+++ I P +FT
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG-----IEPTQFT 148
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L V+ S A C GK++H+ + K GL+ + N+LL++Y KC + + A VF+ M
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
RDI +WN +I+ + ++GQM A F++M IV+W +MISG+ G ALD+F +
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 240 MQMVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
M + PD ++ SVL ACA L L +G+ IH + ++ NALI MY +CG
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 299 CI---------------------------------NQASQLFDQMVERDVVSWSTVIGGL 325
+ NQA +F + +RDVV+W+ +I G
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
HG +AI+LF M PN T +LS + + G S + I +
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI-YS 447
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+ L+ + +AG + A + + + D W S++ + + + E A+ E +L
Sbjct: 448 VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 446 V--LEPE 450
+ L P+
Sbjct: 508 MEGLRPD 514
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 158/352 (44%), Gaps = 50/352 (14%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQ--------IHAHVCKFGLKSHSITENALLDLYGKCD 166
P +L +++ C LL S+ K +H V K GL N L+++Y K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ A K+F+EM R +WN ++S Y++ G M FD++P VSWT MI GY +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
IG Y +A+ V M GIEP + ++ +VL + A +E G+ +H + K L +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 287 CNALIEMYIKCGCINQASQLFD-------------------------------QMVERDV 315
N+L+ MY KCG A +FD QM ERD+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V+W+++I G G +A+ +F +M R + P+ T +LSACA N +
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA-----NLEKLCIG 298
Query: 375 SMKRDHHIEHKIEHYG----CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
H + + G L+ + R G ++ A +IE+ K D KI G
Sbjct: 299 KQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK-DLKIEG 349
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 149/347 (42%), Gaps = 56/347 (16%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+ A +F +K+ +V + AMI Y + YG AINL++ M+ G P+ +T
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV-----GGGQRPNSYT 415
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L ++ + L S GKQIH K G NAL+ +Y K + A + F+ +
Sbjct: 416 LAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR 475
Query: 180 -DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+RD V+W ++I A+ G ++ AL++F
Sbjct: 476 CERDTVSWTSMIIALAQHGHAEE-------------------------------ALELFE 504
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKC 297
M M G+ PD I+ V V AC G + G ++ M D + ++ +++++ +
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFH---EMQRLKVPPNDITF 353
G + +A + ++M +E DVV+W G L + + HK I L E L P N +
Sbjct: 565 GLLQEAQEFIEKMPIEPDVVTW----GSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 620
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDH----------HIEHKIEHYG 390
L + + G W E SMK ++HK+ +G
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFG 667
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 292/537 (54%), Gaps = 10/537 (1%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA 63
+ GA ++ + + + + C+ E ++L + + + T M+ GD+
Sbjct: 191 KSGAAAVLSVSNALIALYMKCDT-PEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVN 249
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
A +F++V ++NAMI Y + + A L+++M+ + + D+FT V
Sbjct: 250 AARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEK-----VPLDEFTFTSV 304
Query: 124 IKSCAGLLCPSLGKQIHAHVCK----FGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ +CA GK +H + + F ++ NAL+ LY K +++ A ++F+ M
Sbjct: 305 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 364
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+D+V+WN ++SGY G + KA +F MPY +SW M+SGY H G +AL +F Q
Sbjct: 365 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 424
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ ++P + + + AC +LG+L+ G +H + + NAL+ MY KCG
Sbjct: 425 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 484
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+N A +F M D VSW+ +I L HG +A+ LF +M + P+ I+F+ +L+A
Sbjct: 485 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 544
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C H G +EG YF+SMKRD I +HY L+DLLGR+GR+ +A ++I+ MP +P
Sbjct: 545 CNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPS 604
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IW ++LS CRT ++E A + L + P+ G Y+LLSN Y+ GRW D +R+RKL+R
Sbjct: 605 IWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMR 664
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
+ +KK PGCS IEV +++ F+ GD P ++++ LE++ + V D +
Sbjct: 665 DRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKF 721
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 174/344 (50%), Gaps = 23/344 (6%)
Query: 49 VTKMIDVCNSGGDLAYASLLFKQVKEP--NVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
T ++ + G L A+ F V + L+NAM+ A+ L A++++ +L
Sbjct: 95 ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLG- 153
Query: 107 PRTGSLILPDKFTLPFVIKSCAGL--LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK 164
+GSL PD ++ +I + + L Q+H V K G + NAL+ LY K
Sbjct: 154 --SGSL-RPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMK 210
Query: 165 CD---ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
CD +A KV +EM D+D + W ++ GY R G + AR +F+++ V W AMI
Sbjct: 211 CDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMI 270
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH---MYCDKN 278
SGY G A+A ++FR+M + DE + SVL ACA G G+ +H + N
Sbjct: 271 SGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPN 330
Query: 279 HLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + + NAL+ +Y K G I A ++FD M +DVVSW+T++ G + G KA+ +
Sbjct: 331 FVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEV 390
Query: 338 FHEMQRLKVPP--NDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
F KV P ND++++ ++S H G + L F+ M+ +
Sbjct: 391 F------KVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE 428
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 269/445 (60%), Gaps = 9/445 (2%)
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA----GLLCPSLG 136
+ + RA L+ A +L ML P + P+ TL V+ +CA L L
Sbjct: 37 STIARAARQGDLHAAAASLCA-MLSSPAAPA---PNDVTLLTVLSACADSPSSPLARPLA 92
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+HA K SH + L Y A ++F+ M R +V +N ++SG R
Sbjct: 93 LTLHARALKL-FPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSVVTYNTMVSGLMRN 151
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A +FD MP VSWTA+I G+ G + EA+D FR M + +EPD +++++V+
Sbjct: 152 GLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDYVTLIAVV 211
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA++G+L LG W+H + L R + N+LI+MY +CG + A+Q+F + +R VV
Sbjct: 212 SACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQVFHSIRKRTVV 271
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+++I GLA +G +AI LF EM+R P+ +T G+L+AC+H G GL Y+D M
Sbjct: 272 SWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLM 331
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
++ I ++EHYGC+VDLLGRAGRLD+A++++E MPM+P+ + G+LL+ CR + +L++
Sbjct: 332 TTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRMHGDLDM 391
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A M+HL L+P NYVLLSNIYA G+W+ ++R L++++ +KK PG S++E++
Sbjct: 392 AEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSIVEIDG 451
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELL 521
+V EFVS D + P ++I +L LL
Sbjct: 452 DVHEFVSSDRSHPQAEEIGQMLGLL 476
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 9/180 (5%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H +L+ L ++ + +ID+ G + A+ +F +++ V +N+MI N L
Sbjct: 226 VHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQVFHSIRKRTVVSWNSMIVGLAANGL 285
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLLCPSLGKQIHAHVCKFGLKS 150
AI L+++M R PD TL V+ +C AGL L + ++G+ +
Sbjct: 286 CTEAIELFEEMRRQG-----FKPDAVTLTGVLTACSHAGLTEHGL-RYYDLMTTEYGIAA 339
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNNLISGYARLGQMKKARMLFDKM 209
++DL G+ L EA V E M R + V L++G G + A L +
Sbjct: 340 RMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLAGCRMHGDLDMAEQLMQHL 399
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 59/162 (36%), Gaps = 40/162 (24%)
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP----PNDITFIGL 356
+ SQ + RDVVSW++ I A G H A M L P PND+T + +
Sbjct: 18 TKESQRAPRHAPRDVVSWTSTIARAARQGDLHAAAASLCAM--LSSPAAPAPNDVTLLTV 75
Query: 357 LSACAHTG------------------------FWNEGLMYFDSMKRDHHIE--------- 383
LSACA + + L F R H+
Sbjct: 76 LSACADSPSSPLARPLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDTMPV 135
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ Y +V L R G +D A + + MP PD W +L+
Sbjct: 136 RSVVTYNTMVSGLMRNGLVDAAFEVFDGMP-GPDKVSWTALI 176
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 272/461 (59%), Gaps = 38/461 (8%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G +A+A L+F Q+ P+ F+YN +IR + A++LY +MLR + PDK T
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGG-GGVRPDKLT 84
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI---------- 169
PFV+++C + G Q+HAHV K G +S + +NAL+ ++ C L
Sbjct: 85 FPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRA 144
Query: 170 ---------------------EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
A +F+E +D+V+WN +I+ YA+ G M AR LFD+
Sbjct: 145 REDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQ 204
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+P +VSW MISGY GS+ AL++F QMQ +G +PD ++++S+L ACA G L++G
Sbjct: 205 VPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVG 264
Query: 269 EWIHMYCDKNHLLRRT----VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
+ +H + + R V+ NALI+MY KCG + A ++F M ++DV +W++++GG
Sbjct: 265 QRLH--SSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGG 322
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA HG ++I +F +M + KV P++ITF+ +L AC+H G ++G +F+ M+ + +E
Sbjct: 323 LALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEP 382
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
I+HYGC+VD+LGRAG L +A I+ M +P++ IW +LLS+CR + +E+A A L
Sbjct: 383 NIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQL 442
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
L +++G+YVLLSNIYA G W +MRKL+ + K
Sbjct: 443 LKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 49/323 (15%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT--NNHLYGLAINLYKQMLRDPRT 109
MI GD+A A LF QV E +V +N MI Y +HL+ A+ L++QM R
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLH--ALELFEQMQRMGEK 242
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH--SITENALLDLYGKCDE 167
PD T+ ++ +CA +G+++H+ + ++ + NAL+D+Y KC
Sbjct: 243 -----PDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGS 297
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+ AH+VF M D+D+ WN+++ G A G +
Sbjct: 298 MKSAHEVFWSMRDKDVSTWNSIVGGLALHGHV---------------------------- 329
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVI 286
E++D+F +M + PDEI+ V+VL AC+ G ++ G E+ ++ K +
Sbjct: 330 ---LESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKH 386
Query: 287 CNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+++M + G + +A + D M E + V W T++ HG+ A H ++ + +
Sbjct: 387 YGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKAR 446
Query: 346 VPPNDIT--FIGLLSACAHTGFW 366
ND + ++ L + A G W
Sbjct: 447 ---NDESGDYVLLSNIYASVGEW 466
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 295/562 (52%), Gaps = 76/562 (13%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
L +++ Q++ L + FL+ K I+ C GD+ YA F++V EP++ L+NA+I+ YT
Sbjct: 3 LDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQ 62
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
++ I +Y M S + P+ FT +V+K+C G +GKQIH K+G
Sbjct: 63 KNIVDAPIRMYMDM-----QISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFG 117
Query: 150 SHSITENALLDLYGKCDEL-------------------------------IEAHKVFEEM 178
S+ +N+L+ +Y K ++ +EA VF+EM
Sbjct: 118 SNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM 177
Query: 179 TDRDI-----------VAWNN----------------------------LISGYARLGQM 199
++ A+ N L + YA+ G +
Sbjct: 178 RQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLV 237
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
+ AR F++M ++ W AMISGY + G EA+ +FR+M I D I++ S + A
Sbjct: 238 EVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLAS 297
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
AQ+GSLEL W+ Y K+ T + LI+MY KCG I A +FD++ ++DVV WS
Sbjct: 298 AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWS 357
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I G HG +AI L++EM++ V PND TFIGLL+AC ++G EG F M D
Sbjct: 358 VMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP-D 416
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
H IE +HY C+VDLLGRAG L+QA + I MP+KP +WG+LLS+C+ + + + I
Sbjct: 417 HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEI 476
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A E L +L+P +TG+YV LSN+YA W V+ +R ++ K + K G S IE+N ++
Sbjct: 477 AAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLE 536
Query: 500 EFVSGDDTKPFLKDIFWLLELL 521
F GD + P K+IF L+ L
Sbjct: 537 TFQVGDRSHPKSKEIFEELDRL 558
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 113/245 (46%), Gaps = 9/245 (3%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMI 84
E+L + K IH + K L +V + + G + A F ++++PN+ L+NAMI
Sbjct: 200 EDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMI 259
Query: 85 RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
Y NN AI L+++M+ I D T+ + + A + L + + ++
Sbjct: 260 SGYANNGYGEEAIKLFREMITKN-----IRVDSITMRSAVLASAQVGSLELARWLDGYIS 314
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
K + + L+D+Y KC + A VF+ + D+D+V W+ +I GY G ++A
Sbjct: 315 KSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAIC 374
Query: 205 LFDKMPYTTIV----SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
L+++M + ++ +++ + G E ++F M GIEP V+
Sbjct: 375 LYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLG 434
Query: 261 QLGSL 265
+ G L
Sbjct: 435 RAGYL 439
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/476 (38%), Positives = 266/476 (55%), Gaps = 44/476 (9%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G + A LF ++ +V +NAMI Y + + A+ + +M
Sbjct: 197 TALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQE---- 252
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + P++ T+ V+ +C L LGK I + V G + NAL+D+Y KC
Sbjct: 253 -ADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKC---- 307
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G++ AR LFD M ++ W MI GY H+
Sbjct: 308 ---------------------------GEIGTARKLFDGMEDKDVILWNTMIGGYCHLSL 340
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN- 288
Y EAL +F M + P++++ ++VLPACA LG+L+LG+W+H Y DKN L+ T N
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKN--LKGTGNVNN 398
Query: 289 -----ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
++I MY KCGC+ A Q+F M R + SW+ +I GLA +G A +A+ LF EM
Sbjct: 399 VSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMIN 458
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
P+DITF+G+LSAC GF G YF SM +D+ I K++HYGC++DLL R+G+ D
Sbjct: 459 EGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFD 518
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A ++ M M+PD IWGSLL++CR + +E E L LEPE++G YVLLSNIYA
Sbjct: 519 EAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYA 578
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
GRW+DV+++R + K MKK PGC+ IE++ V EF+ GD P ++IF +L+
Sbjct: 579 GAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLD 634
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 238/441 (53%), Gaps = 15/441 (3%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQV--KEP 75
+L C ++ LK+IH+ I+K L + F +K+I+ C + DL+YA LF + + P
Sbjct: 31 LLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPP 90
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
N+F++N +IRA++ +++L+ QML S + P+ T P + KSCA
Sbjct: 91 NIFIWNTLIRAHSLTPTPTSSLHLFSQMLH-----SGLYPNSHTFPSLFKSCAKSKATHE 145
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
KQ+HAH K L H +L+ +Y + EL A VF++ T RD V++ LI+GY
Sbjct: 146 AKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVS 205
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + AR LFD++P +VSW AMI+GY G + EAL F +MQ + P++ ++VSV
Sbjct: 206 EGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSV 265
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L AC L SLELG+WI + + + NAL++MY KCG I A +LFD M ++DV
Sbjct: 266 LSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDV 325
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MY 372
+ W+T+IGG + +A+ LF M R V PND+TF+ +L ACA G + G Y
Sbjct: 326 ILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAY 385
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
D + + + + ++ + + G ++ A + M + A W +++S
Sbjct: 386 IDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLAS-WNAMISGLAMNG 444
Query: 433 NLEIAVIAMEHLL--VLEPED 451
+ E A+ E ++ +P+D
Sbjct: 445 HAERALGLFEEMINEGFQPDD 465
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/504 (37%), Positives = 296/504 (58%), Gaps = 10/504 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV L++C E +H+ I K F+ +I G L +A +F +
Sbjct: 155 FVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESS 214
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V + MI Y N+ AI L+ ML S + P++ T+ ++ +C+
Sbjct: 215 VKDVVTWTTMINGYARNNWLDEAIALFNSMLS-----SDVKPNEVTMIALLSACSQKGDS 269
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+GK +H H+ + + NA+LD+Y KC L A ++F M RD+ +W +L++GY
Sbjct: 270 EMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGY 329
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISI 252
A+ G + AR LFD+MP IVSW AMI+GY+ EAL++F M +VG+ P E ++
Sbjct: 330 AKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTL 389
Query: 253 VSVLPACAQLGSLELGEWIHM-YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
V VL A QLG LE+G+ IH + +K + ++ NA+++MY KCG I+ A++LF M
Sbjct: 390 VCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMP 449
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E+++VSW+++I A++G A KA+ LF +M + P+ ITFIG+LSAC++ GF +EG
Sbjct: 450 EKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQA 509
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
+F+SM+ +E K EHY C+VDLL R G L +A +I MPM+ WG+LL +CR +
Sbjct: 510 HFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKH 569
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+E+A +A E LL L+PED+G Y LL+NI A +W+DV +R+++R + +KK PG SL
Sbjct: 570 GNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRRMMRERGVKKVPGHSL 629
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIF 515
IE+ + EF+ D + +I+
Sbjct: 630 IEIEGKFHEFLVADTSHTRSSEIY 653
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 214/465 (46%), Gaps = 81/465 (17%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
ILQSC ++ +LK+I I L F ++++ C + GD+ YA L+F Q + PN
Sbjct: 58 ILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNC 117
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F +N MI+ Y + + + ++QM+R+ D + F +K+C +G
Sbjct: 118 FFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEF-----DSGSFVFALKACGQFAEKIVGM 172
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+H+ + K G S +N L+ Y + L A ++F+E + +D+V W +I+GYAR
Sbjct: 173 AVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNN 232
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ EA+ +F M ++P+E++++++L
Sbjct: 233 WLD-------------------------------EAIALFNSMLSSDVKPNEVTMIALLS 261
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVIC-----NALIEMYIKCGCINQASQ------- 305
AC+Q G E+G+ +H H+ R+ + C NA+++MY+KCGC+ A +
Sbjct: 262 ACSQKGDSEMGKTLH-----EHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMER 316
Query: 306 ------------------------LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
LFD+M ER++VSW+ +I G + + + +A+ LFH M
Sbjct: 317 RDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNM 376
Query: 342 -QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
+ + P + T + +LSA G G + I+ + ++D+ + G
Sbjct: 377 VDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCG 436
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+D A + MP K + W S++S+ +Y + + A+ + ++
Sbjct: 437 SIDAAAKLFHSMPEK-NLVSWNSMISAYASYGHAKKALTLFDQMI 480
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 272/461 (59%), Gaps = 38/461 (8%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G +A+A L+F Q+ P+ F+YN +IR + A++LY +MLR + PDK T
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGG-GGVRPDKLT 84
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI---------- 169
PFV+++C + G Q+HAHV K G +S + +NAL+ ++ C L
Sbjct: 85 FPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRA 144
Query: 170 ---------------------EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
A +F+E +D+V+WN +I+ YA+ G M AR LFD+
Sbjct: 145 REDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQ 204
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+P +VSW MISGY GS+ AL++F QMQ +G +PD ++++S+L ACA G L++G
Sbjct: 205 VPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVG 264
Query: 269 EWIHMYCDKNHLLRRT----VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
+ +H + + R V+ NALI+MY KCG + A ++F M ++DV +W++++GG
Sbjct: 265 QRLH--SSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGG 322
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA HG ++I +F +M + KV P++ITF+ +L AC+H G ++G +F+ M+ + +E
Sbjct: 323 LALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEP 382
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
I+HYGC+VD+LGRAG L +A I+ M +P++ IW +LLS+CR + +E+A A L
Sbjct: 383 NIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQL 442
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
L +++G+YVLLSNIYA G W +MRKL+ + K
Sbjct: 443 LKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 49/323 (15%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT--NNHLYGLAINLYKQMLRDPRT 109
MI GD+A A LF QV E +V +N MI Y +HL+ A+ L++QM R
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLH--ALELFEQMQRMGEK 242
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH--SITENALLDLYGKCDE 167
PD T+ ++ +CA +G+++H+ + ++ + NAL+D+Y KC
Sbjct: 243 -----PDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGS 297
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+ AH+VF M D+D+ WN+++ G A G +
Sbjct: 298 MKSAHEVFWSMRDKDVSTWNSIVGGLALHGHV---------------------------- 329
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVI 286
E++D+F +M + PDEI+ V+VL AC+ G ++ G E+ ++ K +
Sbjct: 330 ---LESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKH 386
Query: 287 CNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+++M + G + +A + D M E + V W T++ HG+ A H ++ + +
Sbjct: 387 YGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKAR 446
Query: 346 VPPNDIT--FIGLLSACAHTGFW 366
ND + ++ L + A G W
Sbjct: 447 ---NDESGDYVLLSNIYASVGEW 466
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 300/537 (55%), Gaps = 46/537 (8%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYA 65
L+ K E ++ +L+ C+++ E K++H ILK L +F + ++ C + G + YA
Sbjct: 25 LNAKFNEQGWLSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYA 84
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F Q++EP F YN MIR N+ A+ LY +ML I PD FT PFV+K
Sbjct: 85 CSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERG-----IEPDNFTYPFVLK 139
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+C+ L+ G QIHAHV K GL + D+
Sbjct: 140 ACSLLVALKEGVQIHAHVFKAGL-------------------------------EVDVFV 168
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
N LIS Y + G ++ A ++F++M ++ SW+++I + + + E L + M G
Sbjct: 169 QNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGR 228
Query: 246 EPDEISI-VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
E SI VS L AC LGS LG IH +N V+ +LI+MY+KCG + +
Sbjct: 229 HRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGL 288
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+F M ++ S++ +I GLA HG+ +A+ +F +M + P+D+ ++G+LSAC+H G
Sbjct: 289 CVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVLSACSHAG 348
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
NEGL F+ M+ +H I+ I+HYGC+VDL+GRAG L +A ++I+ MP+KP+ +W SL
Sbjct: 349 LVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSL 408
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LS+C+ + NLEI IA E++ L + G+Y++L+N+YA+ +W +V+R+R + K +
Sbjct: 409 LSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWANVARIRTEMAEKHLV 468
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF-------WLLELLALHQDRAKDVIDI 534
+TPG SL+E N V +FVS D ++P + I+ W L+ D ++ ++D+
Sbjct: 469 QTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQQMEWQLKFEGYTPDMSQVLLDV 525
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 290/549 (52%), Gaps = 59/549 (10%)
Query: 14 EDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+ F + +SC L L+ ++H LK + T +D+ +L+ A LF
Sbjct: 275 QSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFN 334
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ N+ YNA+I Y + GL + D+ +L ++CA +
Sbjct: 335 SLPNHNLQSYNAIIVGYARSD-KGLGL------------------DEVSLSGAFRACAVI 375
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G Q+H K +S+ NA+LD+YGKC L+EA VFEEM RD V+WN +I
Sbjct: 376 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAII 435
Query: 191 SG-------------------------------------YARLGQMKKARMLFDKMPYTT 213
+ Y++ G M+KA L D++ T
Sbjct: 436 AAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 495
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
+VSW A+ISG++ EA F +M +G++PD + ++L CA L ++ELG+ IH
Sbjct: 496 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 555
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
K L I + L++MY KCG + +F++ RD V+W+ ++ G A HG +
Sbjct: 556 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 615
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
A+ +F MQ V PN TF+ +L AC H G +GL YF SM ++ ++ ++EHY C+V
Sbjct: 616 ALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVV 675
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
D++GR+G++ +AL +IE MP + DA IW +LLS C+ + N+E+A A +L LEPED+
Sbjct: 676 DIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSA 735
Query: 454 NYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKD 513
YVLLSNIYA G W +V+++RK++R +KK PGCS IE+ +EV F+ GD P K+
Sbjct: 736 AYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKE 795
Query: 514 IFWLLELLA 522
I+ L++L
Sbjct: 796 IYENLDVLT 804
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 133/265 (50%), Gaps = 5/265 (1%)
Query: 100 YKQMLRDPRTGSLILP-DKFTLPFVIKSCAG--LLCPSLGKQIHAHVCKFGLKSHSITEN 156
+K + P + P K T + + C+ LCP GKQ HA + K N
Sbjct: 24 FKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCP--GKQAHARMILTEFKPTVFVTN 81
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
L+ +Y KC +L A KVF+ M RD V+WN ++ GYA G + A+ LFD MP +VS
Sbjct: 82 CLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVS 141
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W ++ISGY H G + + +DVF QM +G D + VL +C+ L G IH
Sbjct: 142 WNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAV 201
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
K V +AL++MY KC ++ + Q F M E++ VSWS +I G + +
Sbjct: 202 KMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLE 261
Query: 337 LFHEMQRLKVPPNDITFIGLLSACA 361
LF EMQ+ V + TF + +CA
Sbjct: 262 LFKEMQKAGVGVSQSTFASVFRSCA 286
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 201/452 (44%), Gaps = 61/452 (13%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+ A LF + E +V +N++I Y +N + I+++ QM R G++ D+ T
Sbjct: 122 GDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQM---GRMGTVF--DRTT 176
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
V+KSC+ L G QIH K G +T +ALLD+Y
Sbjct: 177 FAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMY----------------- 219
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
A+ ++ + F MP VSW+A+I+G L++F++
Sbjct: 220 --------------AKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKE 265
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
MQ G+ + + SV +CA L +L LG +H + K VI A ++MY+KC
Sbjct: 266 MQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNN 325
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++ A +LF+ + ++ S++ +I G A ++ K + L ++++ G A
Sbjct: 326 LSDAQKLFNSLPNHNLQSYNAIIVGYA---RSDKGLGL-----------DEVSLSGAFRA 371
Query: 360 CAHTGFWNEGLMYFD-SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
CA EGL SMK + I ++D+ G+ G L +A + EEM + DA
Sbjct: 372 CAVIKGDLEGLQVHGLSMKS--LCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDA 428
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE---DTGNYVLLSNIYAKHGRWEDVSRMR 475
W +++++ N E + H +++ D+ + L ++Y+K G E ++
Sbjct: 429 VSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLH 488
Query: 476 KLIRSKSMKK----TPGCSLIEVNNEVQEFVS 503
+ +++ G SL + + E Q+ S
Sbjct: 489 DRLAEQTVVSWNAIISGFSLQKQSEEAQKTFS 520
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 286/506 (56%), Gaps = 6/506 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVT-KMIDVCNSGGDLAYASLLFKQVKEPNVF 78
+L C+ + EL++IH Q L + L + ++ K+ G A A LF ++ P++
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDII 85
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+ +++ + + AI+++ + PD F + + GL +G
Sbjct: 86 SFTSLMSLHLKLDHHWKAISVFSHAIASGHR-----PDGFAAVGALSASGGLGDQRIGSV 140
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+H + + GL S + NAL+D+Y +C + A VF+ M +D V W +++ GY +
Sbjct: 141 VHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVG 200
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ A F +MP + VSWTA+I+G+ +AL++F +M + G P+ I+IV VL A
Sbjct: 201 VDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSA 260
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA +G+L+LG IH Y K++ ++ NAL++MY K G I A +F+++ +D +W
Sbjct: 261 CADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTW 320
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+T+I G KA+ LF +M R + PN +TF+ +LSAC+H G EG FD M+
Sbjct: 321 TTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMRE 380
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+HI+ ++EHYGC+VDLLGR G L++A +I+ M ++PD IW SLLS+C + N +A
Sbjct: 381 VYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAE 440
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
IA ++ EP D G YVLL N+YA RW++ MRK + S+ + K PGCS IEV+ V
Sbjct: 441 IAGMEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVV 500
Query: 499 QEFVSGDDTKPFLKDIFWLLELLALH 524
EF+ D T ++I+ LE++A H
Sbjct: 501 HEFLVEDKTHDARREIYVTLEIMARH 526
>gi|347954512|gb|AEP33756.1| chloroplast biogenesis 19, partial [Raphanus sativus]
Length = 476
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/424 (39%), Positives = 253/424 (59%), Gaps = 21/424 (4%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELIEA 171
+ P+ TL ++ C+ C LG +H + CK G ++H + A+L +Y K +A
Sbjct: 65 VEPNHITLIALLSGCSD--CEPLGDSLHGYACKLGFDRNHVMVGTAILGMYSKRRRFRKA 122
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
VF+ M D + V WN +I GY R ++S T MI+G+ G
Sbjct: 123 RLVFDRMGDXNSVTWNTMIDGYXR-----------------DLISXTXMINGFVKKGLNE 165
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL FR+MQ+ G+EPD ++I++ L AC LG+L G W+H Y + N+LI
Sbjct: 166 EALAWFREMQVSGVEPDYVAIIAALAACTNLGALSFGLWVHRYVVSQDFKNNVRVSNSLI 225
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
++Y +CGC+ A Q+FD+M +R VVSW++VI G A +G AH+++ F +MQ + P+ +
Sbjct: 226 DLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEERFKPDAV 285
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
TF G L+AC+H G EG+ YF++MKRD+ I +IEHYGCLVDL RAGRL+ AL ++E
Sbjct: 286 TFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEDALKVVES 345
Query: 412 MPMKPDAKIWGSLLSSCRTYSN-LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
MPMKP+ + GSLL++CRT+ N E+A M+HL L+ + NYV+LSN+YA G+WE
Sbjct: 346 MPMKPNEVVIGSLLAACRTHGNDTELAERMMKHLSELKVKSHSNYVILSNMYAADGKWEG 405
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKD 530
S+MR+ ++ +KK PG S IE+++ F++GD I ++EL++
Sbjct: 406 ASKMRRKMKGLGLKKQPGFSSIEIDDRTHVFMAGDSAHVETAYIREVVELISSDSRLQGS 465
Query: 531 VIDI 534
V+++
Sbjct: 466 VVEL 469
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 144/340 (42%), Gaps = 68/340 (20%)
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
K L P TT VSWT+ I+ + G AEA M++ G+EP+ I+++++L C+
Sbjct: 22 KTHHLNQSTPETT-VSWTSRITLLSRNGRLAEAAKELTAMRLAGVEPNHITLIALLSGCS 80
Query: 261 QLGSLELGEWIHMYC-----DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
LG+ +H Y D+NH++ + A++ MY K +A +FD+M + +
Sbjct: 81 DCEP--LGDSLHGYACKLGFDRNHVM----VGTAILGMYSKRRRFRKARLVFDRMGDXNS 134
Query: 316 VSWST--------------VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
V+W+T +I G G +A+ F EMQ V P+ + I L+AC
Sbjct: 135 VTWNTMIDGYXRDLISXTXMINGFVKKGLNEEALAWFREMQVSGVEPDYVAIIAALAACT 194
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP-------- 413
+ G + GL + ++ + L+DL R G ++ A + ++M
Sbjct: 195 NLGALSFGL-WVHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWN 253
Query: 414 --------------------------MKPDAKIWGSLLSSCRTYSNLEIAVI---AMEHL 444
KPDA + L++C +E V AM+
Sbjct: 254 SVIVGFAANGHAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRD 313
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+ P +Y L ++Y++ GR ED K++ S MK
Sbjct: 314 YRISPR-IEHYGCLVDLYSRAGRLEDA---LKVVESMPMK 349
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 135/314 (42%), Gaps = 44/314 (14%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAI--NLYKQMLRDPRTG-------SLILP 115
A L+F ++ + N +N MI Y + + + K+ L + S + P
Sbjct: 122 ARLVFDRMGDXNSVTWNTMIDGYXRDLISXTXMINGFVKKGLNEEALAWFREMQVSGVEP 181
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
D + + +C L S G +H +V K++ N+L+DLY +C + A +VF
Sbjct: 182 DYVAIIAALAACTNLGALSFGLWVHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 241
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
++M R +V+WN++I G+A +G+ H E+L
Sbjct: 242 DKMEKRTVVSWNSVIVGFA--------------------------ANGHAH-----ESLV 270
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVICNALIEMY 294
FR+MQ +PD ++ L AC+ +G +E G +++ + R L+++Y
Sbjct: 271 YFRKMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCLVDLY 330
Query: 295 IKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHK-AIHLFHEMQRLKVPPNDIT 352
+ G + A ++ + M ++ + V +++ HG + A + + LKV +
Sbjct: 331 SRAGRLEDALKVVESMPMKPNEVVIGSLLAACRTHGNDTELAERMMKHLSELKVKSHS-N 389
Query: 353 FIGLLSACAHTGFW 366
++ L + A G W
Sbjct: 390 YVILSNMYAADGKW 403
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/414 (41%), Positives = 260/414 (62%), Gaps = 19/414 (4%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSL--GKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELI 169
+ P+ T ++ +C L G IHA+V K GL + ++ AL+D+Y KC +L
Sbjct: 85 VRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLD 144
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
A +F+EM R+ V+WN +I G R G++ +A +LFD+M +SWT+MI G+ G
Sbjct: 145 LAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGC 204
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ +AL+ FR+MQ+ G+EPD ++I+SVL ACA LG+L LG WI+ + K I N+
Sbjct: 205 FEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNS 264
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI+MY +CGCI A Q+F+QM +R +VSW+++I G A +G A +A+ F+ M++
Sbjct: 265 LIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKE----- 319
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
H+G +EGL +FD MKR I +IEHYGCLVDL RAGRL+ ALN+I
Sbjct: 320 -----------GHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVI 368
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
MPMKP+ + GSLL++CRT+ ++ +A M++L ++P NYVLLSNIYA GRW+
Sbjct: 369 ANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWD 428
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
S++RK +++ + K PG S IE++ + EFV+GD T ++I+ +L+ L L
Sbjct: 429 GASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHLFL 482
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 117/250 (46%), Gaps = 36/250 (14%)
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ--LGSLEL 267
P IVSWT+ I+ + G EA F +MQ+ G+ P+ I+ +++L AC L L
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF 109
Query: 268 GEWIHMYCDKNHLLRRTV-ICNALIEMYIKC--------------------------GC- 299
G IH Y K L V + AL++MY KC GC
Sbjct: 110 GGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCM 169
Query: 300 ----INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
+ +A LFDQM ERD +SW+++IGG G +A+ F EMQ V P+ +T I
Sbjct: 170 RNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIIS 229
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+L+ACA+ G GL + + + I+ L+D+ R G + A + E+MP K
Sbjct: 230 VLAACANLGALGLGL-WINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMP-K 287
Query: 416 PDAKIWGSLL 425
W S++
Sbjct: 288 RSLVSWNSMI 297
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 47/290 (16%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MID C G++ A +LF Q+ E + + +MI + + A+ +++M +
Sbjct: 164 MIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQL-----A 218
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
+ PD T+ V+ +CA L LG I+ V K K + N+L+D+Y +C + A
Sbjct: 219 GVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLA 278
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKA-------------------RMLFDKMPYT 212
+VFE+M R +V+WN++I G+A G ++A FD M T
Sbjct: 279 RQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGHSGLVDEGLQFFDIMKRT 338
Query: 213 TIVS-----WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
+S + ++ Y+ G +AL+V M M +P+E+ + S+L AC G + L
Sbjct: 339 RKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPM---KPNEVVLGSLLAACRTHGDVGL 395
Query: 268 GEWIHMY-------CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
E + Y D N++L L +Y G + AS++ +M
Sbjct: 396 AERLMKYLCEVDPGSDSNYVL--------LSNIYAAVGRWDGASKVRKKM 437
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/565 (34%), Positives = 296/565 (52%), Gaps = 76/565 (13%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
L L +++ Q++ L + FL+ K I+ C GD+ YA F++V EP++ L+NA+I+
Sbjct: 15 LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
YT ++ I +Y M S + P+ FT +V+K+C G +GKQIH K+
Sbjct: 75 YTQKNIVDAPIRMYMDM-----QISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKY 129
Query: 147 GLKSHSITENALLDLYGKCDEL-------------------------------IEAHKVF 175
G S+ +N+L+ +Y K ++ +EA VF
Sbjct: 130 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 189
Query: 176 EEMTDRDI-----------VAWNN----------------------------LISGYARL 196
+EM ++ A+ N L + YA+
Sbjct: 190 KEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKR 249
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G ++ AR F++M ++ W AMISGY + G EA+ +FR+M I D I++ S +
Sbjct: 250 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 309
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
A AQ+GSLEL W+ Y K+ T + LI+MY KCG I A +FD++ ++DVV
Sbjct: 310 LASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVV 369
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
WS +I G HG +AI L++EM++ V PND TFIGLL+AC ++G EG F M
Sbjct: 370 LWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM 429
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
DH IE +HY C+VDLLGRAG L+QA + I MP+KP +WG+LLS+C+ + + +
Sbjct: 430 P-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRL 488
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
IA E L +L+P +TG+YV LSN+YA W V+ +R ++ K + K G S IE+N
Sbjct: 489 GEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEING 548
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELL 521
++ F GD + P K+IF L+ L
Sbjct: 549 NLETFQVGDRSHPKSKEIFEELDRL 573
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 9/247 (3%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
+ E+L + K IH + K L +V + + G + A F ++++PN+ L+NA
Sbjct: 213 NVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNA 272
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
MI Y NN AI L+++M+ I D T+ + + A + L + + +
Sbjct: 273 MISGYANNGYGEEAIKLFREMITKN-----IRVDSITMRSAVLASAQVGSLELARWLDGY 327
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
+ K + + L+D+Y KC + A VF+ + D+D+V W+ +I GY G ++A
Sbjct: 328 ISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEA 387
Query: 203 RMLFDKMPYTTIV----SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
L+++M + ++ +++ + G E ++F M GIEP V+
Sbjct: 388 ICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDL 447
Query: 259 CAQLGSL 265
+ G L
Sbjct: 448 LGRAGYL 454
>gi|413943789|gb|AFW76438.1| hypothetical protein ZEAMMB73_890738 [Zea mays]
Length = 529
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/474 (38%), Positives = 286/474 (60%), Gaps = 18/474 (3%)
Query: 28 IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
+E +K+H +K + ++++ G A +F ++ + + L+N M+R Y
Sbjct: 63 VEGRKVHAAAVKTGFRWDAYTACSLMEMYTMLGRADSARRVFDEMPQRFLVLWNMMMRCY 122
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG 147
+ A+ L QM T PD+ TL + +C+ +LG++IH+++ G
Sbjct: 123 IRCGRFTAAVALAVQMESGGAT-----PDRVTLVTAVTACSRAGDLNLGRRIHSYM--DG 175
Query: 148 LKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
+ S+ NALLD+Y K L EA K+FE+M +R+I++W L+SGY GQ+ KAR+ F
Sbjct: 176 VFGFSLPVANALLDMYTKNGYLEEAVKMFEQMPERNIISWTILVSGYGIAGQLDKARVFF 235
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
+ ++ WT+MI+ GS+ EAL +FR MQ+ +EPD+ ++V++L CA +G+L+
Sbjct: 236 YQCTQKDLILWTSMINACVQHGSFEEALILFRDMQLQRVEPDKFTVVTLLTCCANIGALD 295
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
GEWIH Y + ++ V+ ALIEMY KCG ++++ Q+F +M +D +W+ +I GLA
Sbjct: 296 QGEWIHQYAESRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGKDAAAWTAIICGLA 355
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+G+A KA+ LF EMQR K P+ ITFIG+LSAC H G +EG YF +MK +HIE +I
Sbjct: 356 TNGQASKALELFEEMQRSKTKPDGITFIGVLSACCHGGLVDEGQRYFQAMKEVYHIEPRI 415
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA-KIWGSLLSSCRTYSNLEIA-----VIA 440
EHY CLV+LLG AG L +A +I +MP+ D ++G+LL++C+ N+E++ IA
Sbjct: 416 EHYSCLVNLLGHAGLLYEAEKLITDMPVNNDTMPLFGALLTACKANGNVEMSEWLTKRIA 475
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E P N VL+SN+YA RWE+ R+R + + ++KKT GCS+IEV
Sbjct: 476 KED---CSPNPDVN-VLMSNVYATASRWEEAIRVRSKMTNPAVKKTAGCSMIEV 525
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 173/396 (43%), Gaps = 72/396 (18%)
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N +IR + + +Y D R L D +T PFV+++ + G+++H
Sbjct: 15 NVLIRTLARRGSFSRVMAVYY----DLRARGLA-ADSYTYPFVLRAIGTMKLSVEGRKVH 69
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
A K G + + T +L+++Y A +VF+EM R +V WN ++ Y R G+
Sbjct: 70 AAAVKTGFRWDAYTACSLMEMYTMLGRADSARRVFDEMPQRFLVLWNMMMRCYIRCGR-- 127
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
+ A+ + QM+ G PD +++V+ + AC+
Sbjct: 128 -----------------------------FTAAVALAVQMESGGATPDRVTLVTAVTACS 158
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
+ G L LG IH Y D V NAL++MY K G + +A ++F+QM ER+++SW+
Sbjct: 159 RAGDLNLGRRIHSYMDGVFGFSLPV-ANALLDMYTKNGYLEEAVKMFEQMPERNIISWTI 217
Query: 321 VIGGLA-------------------------------NHGKAHKAIHLFHEMQRLKVPPN 349
++ G HG +A+ LF +MQ +V P+
Sbjct: 218 LVSGYGIAGQLDKARVFFYQCTQKDLILWTSMINACVQHGSFEEALILFRDMQLQRVEPD 277
Query: 350 DITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
T + LL+ CA+ G ++G ++ + R+ I+ + L+++ + G +D++L I
Sbjct: 278 KFTVVTLLTCCANIGALDQGEWIHQYAESRNMKIDAVLGT--ALIEMYSKCGHVDKSLQI 335
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
M K DA W +++ T A+ E +
Sbjct: 336 FGRMQGK-DAAAWTAIICGLATNGQASKALELFEEM 370
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 131/308 (42%), Gaps = 51/308 (16%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL---GEWIHMYCDKNHLLRRT 284
GS++ + V+ ++ G+ D + VL A +G+++L G +H K
Sbjct: 25 GSFSRVMAVYYDLRARGLAADSYTYPFVLRA---IGTMKLSVEGRKVHAAAVKTGFRWDA 81
Query: 285 VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
+L+EMY G + A ++FD+M +R +V W+ ++ G+ A+ L +M+
Sbjct: 82 YTACSLMEMYTMLGRADSARRVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVALAVQMESG 141
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
P+ +T + ++AC+ G N G M D + L+D+ + G L++
Sbjct: 142 GATPDRVTLVTAVTACSRAGDLNLGRRIHSYM--DGVFGFSLPVANALLDMYTKNGYLEE 199
Query: 405 ALNIIEEMP------------------------------MKPDAKIWGSLLSSCRTYSNL 434
A+ + E+MP + D +W S++++C + +
Sbjct: 200 AVKMFEQMPERNIISWTILVSGYGIAGQLDKARVFFYQCTQKDLILWTSMINACVQHGSF 259
Query: 435 EIAVIAME--HLLVLEPEDTGNYVLLS---NIYA-KHGRWEDVSRMRKLIRSKSMK--KT 486
E A+I L +EP+ LL+ NI A G W + + S++MK
Sbjct: 260 EEALILFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEW-----IHQYAESRNMKIDAV 314
Query: 487 PGCSLIEV 494
G +LIE+
Sbjct: 315 LGTALIEM 322
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 291/497 (58%), Gaps = 6/497 (1%)
Query: 31 KKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+ IH K + QS + ++ + S L A LF ++ + +V + ++ Y
Sbjct: 150 EAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYAR 209
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
L A ++ +M+ P++ TL + + LG+ +H V + G++
Sbjct: 210 GGLPDEAWRVFCRMV----VAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVR 265
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
ENAL+D++GKC + A ++F+ M +D+ +W +++S YA+ G ++ A LF ++
Sbjct: 266 MSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEI 325
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P VSW+ M++ Y+ EA+ +F M G+EP + ++VSVL ACAQLG L++G
Sbjct: 326 PNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGR 385
Query: 270 WIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
++ +H + TV + NA I+M+ KCG + AS+LF M +++VVSW+T+I A H
Sbjct: 386 CLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALH 445
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G++ +A+HLF + + + + P++IT+IG+LSAC+H+G +EG +F MK + IE + EH
Sbjct: 446 GQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEH 505
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
Y C++DLLG+ G L++A + MP+ D WG+LL++CR + N+EI A + L+ L+
Sbjct: 506 YACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLVGLD 565
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
P D+G YVL+S IYA +W V +R ++R + +KK PGCS IEV+ + EF++ D +
Sbjct: 566 PSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKNPGCSSIEVDGKFHEFLAADVSH 625
Query: 509 PFLKDIFWLLELLALHQ 525
+DI+ LE + LH
Sbjct: 626 AHSEDIYAALENIYLHS 642
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 196/435 (45%), Gaps = 74/435 (17%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKE 74
+ +L+SC + L ++ + L+ F ++++ C + LA+A+ + Q E
Sbjct: 34 LLSLLESCASFRRLLQLQALLTVSGLAAHRFPASRLLAFCALSDPPRLAHAAAVLAQCAE 93
Query: 75 -PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP-DKFTLPFVIKSCAGLLC 132
PN ++ M+R + A+ L++++LRD LP D T+ F +K+
Sbjct: 94 GPNAYMLATMMRGFLRAGKPAHALALFRRVLRDR------LPADARTIVFAVKAATTSSS 147
Query: 133 PSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
P+ + IH K G S+ NAL+ +Y L +A K+F+EM DRD+V+W L+
Sbjct: 148 PA--EAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVD 205
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GYAR G +A +F +M +++G G P+E++
Sbjct: 206 GYARGGLPDEAWRVFCRM----------VVAG--------------------GGWPNEVT 235
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V+ A Q+G L LG +H ++ + + NAL++M+ KCGC+ A ++FD M
Sbjct: 236 LVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMP 295
Query: 312 ERDVVSWSTVI------GGLANHGKAHK-------------------------AIHLFHE 340
+DV SW++++ G L N GK K A+ +F++
Sbjct: 296 IKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFND 355
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
M V P D T + +LSACA G + G +D+ H +E + +D+ + G
Sbjct: 356 MIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCG 415
Query: 401 RLDQALNIIEEMPMK 415
+ A + M K
Sbjct: 416 DVGAASRLFRNMEDK 430
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 287/506 (56%), Gaps = 6/506 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVT-KMIDVCNSGGDLAYASLLFKQVKEPNVF 78
+L C+ + EL++IH Q L + L + ++ K+ G A A LF ++ P++
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDII 85
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+ +++ + + AI+++ + PD F + + GL +G
Sbjct: 86 SFTSLMSLHLKLDHHWKAISVFSHAIASGHR-----PDGFAAVGALSASGGLGDQRIGSV 140
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+H + + GL S + NAL+D+Y +C + A VF+ M +D V W +++ GY +
Sbjct: 141 VHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVG 200
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ A F +MP + VSWTA+I+G+ +AL++F +M + G P+ I+IV VL A
Sbjct: 201 VDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSA 260
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA +G+L+LG IH Y K++ ++ NAL++MY K G I A +F+++ +D +W
Sbjct: 261 CADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTW 320
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+T+I G KA+ LF +M R + PN +TF+ +LSAC+H G EG FD M+
Sbjct: 321 TTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMRE 380
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+HI+ ++EHYGC+VDLLGR G L++A +I+ M ++PD IW SLLS+C + N +A
Sbjct: 381 VYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAE 440
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
IA + ++ EP D G YVLL N+YA RW++ MRK + S+ + K PGCS IEV+ V
Sbjct: 441 IAGKEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVV 500
Query: 499 QEFVSGDDTKPFLKDIFWLLELLALH 524
EF+ D + ++I+ LE++A H
Sbjct: 501 HEFLVEDKSHDARREIYVTLEIMARH 526
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 282/511 (55%), Gaps = 38/511 (7%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQ 71
+ V ++ C + +LK I +++ L+Q FL +K+I+ G +AYA +F
Sbjct: 7 QGSLVAAIKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSC 66
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
PN+F++N +IR Y+ + AI LY+ M I P+ +T FV+K+C LL
Sbjct: 67 THHPNLFMWNTIIRGYSISDSPITAIALYRDMFL-----CGISPNSYTFGFVLKACCKLL 121
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
G+++H+ + K GL + N L+ LY C + A +F+EM + D +W+ ++S
Sbjct: 122 RLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVS 181
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GYA+ GQ EAL +FR+MQ + D +
Sbjct: 182 GYAQNGQA-------------------------------VEALKLFREMQAENVSSDAFT 210
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+ SV+ C LG+L+LG+W+H Y DK + V+ AL+ MY KCG ++ A ++F M
Sbjct: 211 LASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMA 270
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
ERDV +WST+I G A HG KA+ LF M+R K PN +TF +LSAC+H+G +G
Sbjct: 271 ERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQ 330
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
F++M ++ I +I+HYGC+VDL RAG + A I+ MP++P+ +W +LL +C+T+
Sbjct: 331 IFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTH 390
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
++ +L L+P NYVL+SN+YA GRW V ++R L++ K+ KK G S
Sbjct: 391 GYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSS 450
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
IE+N V +F+ GD++ P + I+ +L +A
Sbjct: 451 IEINFMVHKFIMGDESHPEREKIYGMLHQMA 481
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 275/483 (56%), Gaps = 44/483 (9%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+HT ++K +++V +I + +G DL A LF + +V +NAMI Y
Sbjct: 22 VHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGE 81
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
G ++ +M VC+
Sbjct: 82 MGHTRMVFDRM---------------------------------------VCR-----DV 97
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
I+ N +++ Y ++ EA ++F+EM +R++V+WN+++SG+ + G +++A LF +MP
Sbjct: 98 ISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCR 157
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
+VSW +M++ Y G EAL +F QM+ VG++P E ++VS+L ACA LG+L+ G +H
Sbjct: 158 DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLH 217
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
Y + N + +++ AL++MY KCG I+ A+Q+F+ M +DV++W+T+I G+A HG
Sbjct: 218 TYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVK 277
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+A LF EM+ V PNDITF+ +LSAC+H G +EG D M + IE K+EHY C+
Sbjct: 278 EAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCV 337
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
+DLL RAG L++A+ +I MPM+P+ G+LL CR + N E+ + + L+ L+P +
Sbjct: 338 IDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHS 397
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLK 512
G Y+LLSNIYA +W+D ++R L++ + K PG S+IE+ V FV+GD + P
Sbjct: 398 GRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESN 457
Query: 513 DIF 515
I+
Sbjct: 458 KIY 460
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 122/282 (43%), Gaps = 21/282 (7%)
Query: 7 ALSIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLA 63
A+ +K E V +L +C +L L K +HT I + ++ + T ++D+ G ++
Sbjct: 187 AVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKIS 246
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
A+ +F ++ +V +N +I + A L+K+M + + P+ T +
Sbjct: 247 LATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKE-----ASVEPNDITFVAM 301
Query: 124 IKSC--AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-D 180
+ +C AG++ K + +G++ + ++DL + L EA ++ M +
Sbjct: 302 LSACSHAGMVDEGQ-KLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPME 360
Query: 181 RDIVAWNNL-----ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
+ A L I G LG+M R++ + ++ + + + Y + +A
Sbjct: 361 PNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSG--RYILLSNIYAAAKKWDDARK 418
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
V M++ GI ++ VSV+ + G+W H +K
Sbjct: 419 VRNLMKVNGI--SKVPGVSVIELKGMVHRFVAGDWSHPESNK 458
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/518 (35%), Positives = 296/518 (57%), Gaps = 50/518 (9%)
Query: 17 FVPILQSCENLIE---------LKKIHTQILKYLLSQSNFLVTK----MIDVCNSGGDLA 63
+P+++ C NL++ L++IH +++ +S S+ + K + S ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 64 YASLLFKQVKEP-NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPF 122
YA +F ++++P NVF++N +IR Y A +LY++M R L+ PD T PF
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREM----RVSGLVEPDTHTYPF 126
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
+IK+ + LG+ IH+ V + G S +N+LL LY C
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC----------------- 169
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
G + A +FDKMP +V+W ++I+G+ G EAL ++ +M
Sbjct: 170 --------------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
GI+PD +IVS+L ACA++G+L LG+ +H+Y K L R N L+++Y +CG + +
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACA 361
A LFD+MV+++ VSW+++I GLA +G +AI LF M+ + + P +ITF+G+L AC+
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G EG YF M+ ++ IE +IEH+GC+VDLL RAG++ +A I+ MPM+P+ IW
Sbjct: 336 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 395
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
+LL +C + + ++A A +L LEP +G+YVLLSN+YA RW DV ++RK +
Sbjct: 396 RTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRD 455
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
+KK PG SL+EV N V EF+ GD + P I+ L+
Sbjct: 456 GVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 493
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 301/544 (55%), Gaps = 44/544 (8%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F+ + + LIE K+ H + L N L + +I+ + G + A L+F ++ E +
Sbjct: 1384 FLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKD 1443
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +N +I +Y +H G A+N+ M R+ +L D TL ++ + A LG
Sbjct: 1444 VVTWNLLISSYVQHHQVGKALNMCHLM----RSENLRF-DSVTLSSILSASAVTSNIKLG 1498
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K+ H + + L+S + N+++D+Y KC+ + +A KVF+ T+RD+V WN L++ YA++
Sbjct: 1499 KEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQV 1558
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI-- 250
G +A LF +M + ++ +SW ++I G+ G EA D+F QMQ +G +P+ I
Sbjct: 1559 GLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITW 1618
Query: 251 ---------------------------------SIVSVLPACAQLGSLELGEWIHMYCDK 277
SI SVL AC + SL G IH + +
Sbjct: 1619 TTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITR 1678
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + +L++MY KCG I++A ++F M +++ ++ +I A HG+A +A+ L
Sbjct: 1679 HEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALAL 1738
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F +Q+ + P+ ITF +LSAC+H G NEGL F M H++ +EHYGC+V LL
Sbjct: 1739 FKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLS 1798
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
R G LD+AL +I MP +PDA I GSLL++CR + +E+ +HL LEP ++GNYV
Sbjct: 1799 RCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVA 1858
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWL 517
LSN YA GRW +VS MR L++ + ++K PGCS I+ ++ FV+GD + P ++I+ +
Sbjct: 1859 LSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAM 1918
Query: 518 LELL 521
L +L
Sbjct: 1919 LAML 1922
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 199/421 (47%), Gaps = 59/421 (14%)
Query: 20 ILQSC---ENLIELKKIHTQILKY--LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
+LQ C L ++IH +ILK +++ ++ TK++ A LF +++
Sbjct: 1180 LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRV 1239
Query: 75 PNVFLYNAMI-----RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
NVF + A++ ++ + L G + +M + + PD F LP V+K+C
Sbjct: 1240 RNVFSWAAIVGLQCRMGFSEDALLG-----FIEMQENG-----VFPDNFVLPNVLKACGS 1289
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L LGK +H +V K G + ++L+D+YGKC
Sbjct: 1290 LQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKC------------------------ 1325
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
G ++ AR +FD M +V+W +MI GY G EA+DVF M++ GIEP
Sbjct: 1326 -------GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTR 1378
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+++ S L A A L +L G+ H N L ++ +++I Y K G I A +F +
Sbjct: 1379 VTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSR 1438
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG---FW 366
M+E+DVV+W+ +I H + KA+++ H M+ + + +T +LSA A T
Sbjct: 1439 MLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLG 1498
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
EG Y ++R+ +E + ++D+ + R+D A + + + D +W +LL+
Sbjct: 1499 KEGHCY--CIRRN--LESDVVVANSIIDMYAKCERIDDARKVFDSTTER-DLVLWNTLLA 1553
Query: 427 S 427
+
Sbjct: 1554 A 1554
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 232/497 (46%), Gaps = 57/497 (11%)
Query: 3 ARIGALSIKE---LEDRFV--PILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMID 54
A +G + ++E D FV +L++C +L + K +H +LK F+ + ++D
Sbjct: 1261 ALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVD 1320
Query: 55 VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL 114
+ G L A +F + E NV +N+MI Y N L AI+++ M + I
Sbjct: 1321 MYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEG-----IE 1375
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P + T+ + + A L GKQ HA A+L+
Sbjct: 1376 PTRVTVASFLSASANLDALIEGKQGHAI--------------AILN-------------- 1407
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
D D + +++I+ Y+++G ++ A ++F +M +V+W +IS Y +AL
Sbjct: 1408 ---SLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKAL 1464
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
++ M+ + D +++ S+L A A +++LG+ H YC + +L V+ N++I+MY
Sbjct: 1465 NMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMY 1524
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
KC I+ A ++FD ERD+V W+T++ A G + +A+ LF++MQ VPPN I++
Sbjct: 1525 AKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWN 1584
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP- 413
++ G NE F M+ + + + L+ L ++G +A+ ++M
Sbjct: 1585 SVILGFLRNGQVNEAKDMFSQMQ-SLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQE 1643
Query: 414 --MKPDAKIWGSLLSSCRTYSNL----EIAVIAMEHLLVLE-PEDTGNYVLLSNIYAKHG 466
++P S+L +C +L I H L P T L ++YAK G
Sbjct: 1644 AGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATS----LVDMYAKCG 1699
Query: 467 RWEDVSRMRKLIRSKSM 483
++ ++ ++ SK +
Sbjct: 1700 SIDEAKKVFHMMSSKEL 1716
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/503 (35%), Positives = 291/503 (57%), Gaps = 38/503 (7%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L +C L +K + H ++LK F++ +I ++ G A +F + +
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRD 176
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +N MI A+ N L A +L +M + + PD+ T+ ++ +CA L G
Sbjct: 177 VVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN----LRPDEVTMVSLVPACAQLGNLERG 232
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K +H++ + GL + NA+LD+Y KCD++ A +VF + ++D
Sbjct: 233 KFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKD-------------- 278
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
++SWT+M+SG G + EAL +F++MQ+ IE DEI++V VL
Sbjct: 279 -----------------VLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVL 321
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACAQ G+L+ G++IH+ DK + V+ AL++MY KCG I+ A Q+F +M R+V
Sbjct: 322 SACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVF 381
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+ +IGGLA HG AI LF +M+ K+ P+D+TFI LL AC+H G +EGL F +M
Sbjct: 382 TWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAM 441
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
K IE ++EHYGC+VDLL RA ++D AL IE MP+K ++ +W +LL +CR+ + ++
Sbjct: 442 KNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDL 501
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A ++ LEP+ G YV+LSN+YA +W+ ++RK +++K ++KTPGCS IE+N
Sbjct: 502 AEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNG 561
Query: 497 EVQEFVSGDDTKPFLKDIFWLLE 519
+ +FV+GD + + I+ ++E
Sbjct: 562 MIHQFVAGDRSHLQTEQIYAMIE 584
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 224/440 (50%), Gaps = 43/440 (9%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQVKEPNVFLYN 81
C ++ + K+ H +L+ L + +K+I + GDL YA LF Q++ P+ F+ N
Sbjct: 21 CTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICN 80
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
MIR Y + A++LY M+ + D +T PFV+ +CA L LG++ H
Sbjct: 81 TMIRGYARSQNPYEAVSLYYFMVERG-----VPVDNYTYPFVLAACARLGAVKLGRRFHC 135
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
V K G S NAL+ Y C A VF+E T RD+V WN +I+ + G +K
Sbjct: 136 EVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEK 195
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
A L D+M ++ + PDE+++VS++PACAQ
Sbjct: 196 AFDLLDEMT------------------------------KLDNLRPDEVTMVSLVPACAQ 225
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
LG+LE G+++H Y + L + NA+++MY KC I A ++F+++ E+DV+SW+++
Sbjct: 226 LGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSM 285
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
+ GLA G +A+ LF +MQ K+ ++IT +G+LSACA TG ++G Y +
Sbjct: 286 LSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQG-KYIHLLIDKFE 344
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI-- 439
I + LVD+ + G +D AL + M ++ + W +L+ + + E A+
Sbjct: 345 INCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNALIGGLAMHGHGEDAISLF 403
Query: 440 -AMEHLLVLEPEDTGNYVLL 458
MEH ++ P+D LL
Sbjct: 404 DQMEHDKLM-PDDVTFIALL 422
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 10/236 (4%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
VP NL K +H+ + L ++ + ++D+ D+ A +F +++E +
Sbjct: 219 LVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKD 278
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V + +M+ + + A+ L+++M + I D+ TL V+ +CA G
Sbjct: 279 VLSWTSMLSGLAKSGYFQEALALFQKMQLNK-----IELDEITLVGVLSACAQTGALDQG 333
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K IH + KF + + E AL+D+Y KC + A +VF M R++ WN LI G A
Sbjct: 334 KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMH 393
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEP 247
G + A LFD+M + + V++ A++ +H G E L +F+ M+ IEP
Sbjct: 394 GHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEP 449
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 281/503 (55%), Gaps = 37/503 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+LQ+ L L ++H ++ S FL+TK++++ + G ++Y +F V P+ FL
Sbjct: 18 LLQAGPRLKLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFL 77
Query: 80 YNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+ ++IR+ + H + + ++ Y +M+ S + P +T VIKSCA L+ G+
Sbjct: 78 FTSLIRSTSKFHNFSVYSLYFYTRMVL-----SNVAPSNYTFTSVIKSCADLVALRHGRI 132
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
IH HV G S + AL+ YGKC G
Sbjct: 133 IHGHVLVNGFGSDVYVQTALMSFYGKC-------------------------------GV 161
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ AR +FDKM ++V+W +MISGY G EA+ +F +M+ +G+EP+ + VSVL A
Sbjct: 162 LCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSA 221
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA LG+ LG W+H Y N L V+ +LI MY +CG +++A ++FD M ER+VV+W
Sbjct: 222 CAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAW 281
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ +I G +G +A+ LFHEM+R + PN ITF+ +LSACAH G NEG F+SM+
Sbjct: 282 TAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMRE 341
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
++ + ++EH+ CLVD+LGRAG LD+A N I+E+ +P IW ++L +C+ + N +
Sbjct: 342 EYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGA 401
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
EH L EP + +YV+LSNIYA GR + V +R + K +KK G S I+++ +
Sbjct: 402 QVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKT 461
Query: 499 QEFVSGDDTKPFLKDIFWLLELL 521
F GD + +I+ L+ L
Sbjct: 462 YLFSMGDKSHTETNEIYHYLDQL 484
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/468 (36%), Positives = 271/468 (57%), Gaps = 38/468 (8%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G + A +F ++ +V +NA I Y Y A+ L+K+M++
Sbjct: 173 TALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMK---- 228
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ V+ +CA LG+Q+H+ + G + NAL+DLY KC
Sbjct: 229 -TNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKC---- 283
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LF + ++SW +I GYTH+
Sbjct: 284 ---------------------------GELETACGLFQGLSNKDVISWNTLIGGYTHMNL 316
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVIC 287
Y EAL +F+ M G +P++++++S+L ACA LG++++G WIH+Y DK + + +
Sbjct: 317 YKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 376
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+LI+MY KCG I A Q+FD M+ R + SW+ +I G A HG+A+ A +F M++ +
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+DITF+GLLSAC+H+G + G F SM RD+ + K+EHYGC++DL G +G +A
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEK 496
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I M M+PD IW SLL +C+ + N+E+ ++L+ +EPE+ G+YVLLSNIYA R
Sbjct: 497 MINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAER 556
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
W +V++ R L+ K MKK PGCS IE+++ V EF+ GD P ++I+
Sbjct: 557 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 227/402 (56%), Gaps = 15/402 (3%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKE 74
+ +L C+ L L+ IH Q++K L +N+ ++K+++ C L YA +F ++E
Sbjct: 6 LSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCP 133
P + ++N M R + + A+ LY M+ SL +LP+ +T PF++KSCA
Sbjct: 66 PXLLIWNTMFRGHALSSDPVSALKLYVCMV------SLGLLPNSYTFPFLLKSCAKSXAF 119
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+H V KFG +L+ +Y + L +A KV ++ + RD+V++ LI+GY
Sbjct: 120 KEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGY 179
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G ++ A +FD++P +VSW A ISGY G+Y EAL++F++M + PDE ++V
Sbjct: 180 ASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMV 239
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+VL ACAQ GS+ELG +H + + + I NALI++Y KCG + A LF + +
Sbjct: 240 TVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK 299
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL--- 370
DV+SW+T+IGG + +A+ LF +M R PND+T + +LSACAH G + G
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIH 359
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
+Y D KR + + L+D+ + G ++ A + + M
Sbjct: 360 VYID--KRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM 399
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 175/367 (47%), Gaps = 44/367 (11%)
Query: 9 SIKELEDRFVPILQSC--ENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
+++ E V +L +C IEL +++H+ I + + +V +ID+ + G+L A
Sbjct: 230 NVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETA 289
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF+ + +V +N +I YT+ +LY A+ L++ MLR P+ T+ ++
Sbjct: 290 CGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEK-----PNDVTMLSILS 344
Query: 126 SCAGLLCPSLGKQIHAHVCKF--GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+CA L +G+ IH ++ K G+ + S +L+D+Y KC ++ A +VF+ M +R +
Sbjct: 345 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
+WN +I G+A G+ A D+F +M+
Sbjct: 405 SSWNAMIFGFAMHGRANA-------------------------------AFDIFSRMRKN 433
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH-LLRRTVICNALIEMYIKCGCINQ 302
GIEPD+I+ V +L AC+ G L+LG I +++ L+ + +I++ G +
Sbjct: 434 GIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKE 493
Query: 303 ASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
A ++ + M +E D V W +++ HG + +++ P N +++ L + A
Sbjct: 494 AEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIE-PENPGSYVLLSNIYA 552
Query: 362 HTGFWNE 368
WNE
Sbjct: 553 TAERWNE 559
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 294/520 (56%), Gaps = 49/520 (9%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
E K++H Q+LK+ +++F + ++ C + G + YA +F+Q+ +P F +N MIR
Sbjct: 3 EFKQVHAQVLKW---ENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMIRG 59
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
Y N A+ LY +ML + D FT P + K+CA L G QIH ++ K
Sbjct: 60 YVNVMNMENALFLYYEMLERG-----VESDNFTYPALFKACASLRSIEEGMQIHGYIFKR 114
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
GL+ D+ N+LI+ Y + G+++ + +F
Sbjct: 115 GLEG-------------------------------DLFVQNSLINMYGKCGKIELSCSVF 143
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSL 265
+ M + SW+A+I+ + +G ++E L VF +M G P+E +VSVL AC LG+L
Sbjct: 144 EHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGAL 203
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+LG H+ +N ++ +LI+MY+KCGCI + LF +MV+++ +S+S +I GL
Sbjct: 204 DLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGL 263
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A HG+ +A+ +F +M + P+D+ ++G+LSAC H G +EGL F+ MK +H IE
Sbjct: 264 AMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPT 323
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
I+HYGC+V L+GRAG L++AL I MP+KP+ +W LLS+C+ + NLEI IA + L
Sbjct: 324 IQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLG 383
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
L + G+YV+LSN+YA+ RWEDV+++R + K +TPG SL++V ++ +FVS D
Sbjct: 384 ELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQD 443
Query: 506 DTKPFLKDIF-------WLLELLALHQDRAKDVIDIMYED 538
+ P K ++ W L+ D ++ + D+ E+
Sbjct: 444 MSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDEEE 483
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 289/499 (57%), Gaps = 42/499 (8%)
Query: 30 LKKIHTQILKYL--LSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
L++IH +IL ++ +S +FL++K++ + G+ YA +F Q+ P +F YN++IR
Sbjct: 4 LRQIHARILTHVPPISSVSFLISKILSFAALSPFGNFDYARKIFSQIPNPGIFAYNSVIR 63
Query: 86 AYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
+ I+L+K M+ P+ FT+ FV+K+C+ ++ GKQIHA +
Sbjct: 64 GCLYTKIPSKEPIHLFKDMVGKGYPN----PNTFTMAFVLKACSIIMALEEGKQIHAQIL 119
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
+ G S +++L++ Y KC+E+ A KV
Sbjct: 120 RSGFSSSPYVQSSLVNFYSKCEEITIARKV------------------------------ 149
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
FD++ +V W+AM+SGY +G EAL +FR+MQ+VGIEPDE+S+V VL ACA +G+
Sbjct: 150 -FDEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGA 208
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
L++G+W+H Y K + + ALI MY KCGCI +A ++FD+M +D +WS++I G
Sbjct: 209 LDIGKWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVG 268
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA HG A A+++F M+ + PN +TFIG+LSACAH G ++G Y+ SM + IE
Sbjct: 269 LAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSM-LELGIEP 327
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+EHYGC+VDLL R G +D+A + +P PD IW +LL + L+ A + L
Sbjct: 328 SMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVAGKL 386
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
L LEP NY++L+N+YA + E VS +RK+++ +K PGC+ IEV+ V FV+G
Sbjct: 387 LELEPWKAENYIILANLYASVSQLEKVSHVRKMMKENGIKALPGCTSIEVDGFVHNFVTG 446
Query: 505 DDTKPFLKDIFWLLELLAL 523
D + P ++I L +AL
Sbjct: 447 DWSHPEAEEIKKTLRDVAL 465
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L++C ++ L K+IH QIL+ S S ++ + +++ + ++ A +F ++ E N
Sbjct: 98 VLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERN 157
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ ++AM+ Y + A+ ++++M G I PD+ +L V+ +CA + +G
Sbjct: 158 LVCWSAMVSGYARLGMINEALIMFREM---QVVG--IEPDEVSLVGVLSACAMVGALDIG 212
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K +HA++ K + AL+++Y KC + +A ++F+EM +D AW+++I G A
Sbjct: 213 KWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIH 272
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
G + A +F +M V++ ++S H G ++ + M +GIEP
Sbjct: 273 GLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLELGIEPS 328
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 123/308 (39%), Gaps = 29/308 (9%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCN 57
M + + I+ E V +L +C + L K +H I K ++ L T +I++
Sbjct: 180 MFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYA 239
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
G + A +F +++ + +++MI + L A+N++ +M P+
Sbjct: 240 KCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAK-----PNH 294
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
T ++ +CA S GK+ + + + G++ ++DL + + EA+
Sbjct: 295 VTFIGILSACAHGGLVSDGKRYWSSMLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALI 354
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA-----MISGYTHIGSYAE 232
+ D V W L+ Y + ++KA M+ K+ + W A + + Y + +
Sbjct: 355 IPTPDPVIWRTLLVAYTKNRMLQKAEMVAGKL--LELEPWKAENYIILANLYASVSQLEK 412
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLG------SLELGEWIHMYCDKNHLLRRTVI 286
V + M+ GI+ LP C + + G+W H ++ R V
Sbjct: 413 VSHVRKMMKENGIK--------ALPGCTSIEVDGFVHNFVTGDWSHPEAEEIKKTLRDVA 464
Query: 287 CNALIEMY 294
LI Y
Sbjct: 465 LKILISGY 472
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/414 (39%), Positives = 251/414 (60%), Gaps = 4/414 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLC--PSLGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELI 169
+ P+ T ++ C S G +H + CK GL ++H + A++ +Y K +
Sbjct: 63 VEPNHITFIALLSGCGDFSSGSESFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVS 122
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A VF+ M ++ + WN +I GY R G++ A LFD+MP ++SWTAMI+G+ G
Sbjct: 123 KARLVFDHMEGKNSMTWNTMIDGYMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGF 182
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EAL FR+MQ G+EPD ++I++VL AC LG+L G W+H Y + N+
Sbjct: 183 HEEALVWFREMQSSGVEPDYVAIIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNS 242
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
I+++ +CGC+ A +FD M +R VVSW++VI + +G A +++ F MQ PN
Sbjct: 243 SIDLHCRCGCVELAQPVFDHMEKRTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPN 302
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G L+AC+H G EGL YF +MK+++ I +IEHYGCLVDL RAGRL+ ALN++
Sbjct: 303 AVTFTGALTACSHVGLVEEGLRYFQTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVV 362
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEI-AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
+ MPMKP+ + GSLL++CRT+ N + A M+HL + NYV+LSN+YA G+W
Sbjct: 363 QSMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDTNVKSHSNYVILSNMYAADGKW 422
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
E S+MR+ ++ +KK PG S IE+++ F++GD I +LE+L+
Sbjct: 423 EGASKMRRKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETGYIREVLEILS 476
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 145/336 (43%), Gaps = 75/336 (22%)
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL--GSL 265
K+ +T +SWT+ I+ + G AEA F M+ G+EP+ I+ +++L C GS
Sbjct: 26 KLNLSTTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIALLSGCGDFSSGSE 85
Query: 266 ELGEWIHMYC-----DKNHLLRRTVIC---------------------------NALIEM 293
G+ +H Y D+NH++ T I N +I+
Sbjct: 86 SFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSMTWNTMIDG 145
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
Y++ G I+ A +LFD+M ER ++SW+ +I G G +A+ F EMQ V P+ +
Sbjct: 146 YMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYVAI 205
Query: 354 IGLLSACAHTGFWNEGLMY--------FDSMKR----------------------DHHIE 383
I +L+AC + G + GL F + R DH +
Sbjct: 206 IAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDHMEK 265
Query: 384 HKIEHYGCLVDLLGRAGRLDQAL---NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
+ + ++ + G D++L ++E KP+A + L++C S++ +
Sbjct: 266 RTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTAC---SHVGLVEEG 322
Query: 441 MEHLLVLEPE-----DTGNYVLLSNIYAKHGRWEDV 471
+ + ++ E +Y L ++Y++ GR ED
Sbjct: 323 LRYFQTMKKEYRISPRIEHYGCLVDLYSRAGRLEDA 358
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 113/275 (41%), Gaps = 37/275 (13%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ ++ +++ MID G + A LF ++ E + + AMI + + A
Sbjct: 127 VFDHMEGKNSMTWNTMIDGYMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEA 186
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + V+ +C L S G +H ++ +++ N
Sbjct: 187 LVWFREM-----QSSGVEPDYVAIIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNN 241
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
+ +DL+ +C + A VF+ M R +V+WN++I ++ G
Sbjct: 242 SSIDLHCRCGCVELAQPVFDHMEKRTVVSWNSVIVVFSANGHAD---------------- 285
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYC 275
E+L FR+MQ G +P+ ++ L AC+ +G +E G +
Sbjct: 286 ---------------ESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEGLRYFQTMK 330
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ + R L+++Y + G + A + M
Sbjct: 331 KEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSM 365
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/498 (36%), Positives = 274/498 (55%), Gaps = 39/498 (7%)
Query: 20 ILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
IL +C L LK++H +++ + + G L A +F ++
Sbjct: 242 ILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKT 301
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +NA+I N A+NLY QM T S ++PD FT+ ++ + A L G
Sbjct: 302 VNSWNALIGGCAQNGDPRKALNLYIQM-----TYSGLVPDWFTIGSLLLASAHLKSLRYG 356
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K++H V + GL+ S +LL LY C
Sbjct: 357 KEVHGFVLRHGLEIDSFIGISLLSLYIHC------------------------------- 385
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G+ AR+LFD M + VSW AMISGY+ G +AL +FR++ G +P +I++VSVL
Sbjct: 386 GESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVL 445
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+Q +L LG+ H Y K L+ + + I+MY K GCI ++ +FD + +D+
Sbjct: 446 GACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLA 505
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+ +I HG ++I LF M+++ P+ TFIG+L+ C+H G EGL YF+ M
Sbjct: 506 SWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEM 565
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ H IE K+EHY C++D+LGRAGRLD AL ++ EMP +PD+++W SLLS CR + LEI
Sbjct: 566 QNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEI 625
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
I E LL LEP++ NYV LSN+YA GRW+DV R+R++I+ ++K GCS IE+
Sbjct: 626 GQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGG 685
Query: 497 EVQEFVSGDDTKPFLKDI 514
+V FV+GD+ P K++
Sbjct: 686 KVHSFVAGDNLLPQSKEM 703
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 141/278 (50%), Gaps = 38/278 (13%)
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
A N LY AI+++ +++ D + D FT P VIK+C G L LG+ IH V K
Sbjct: 4 AVHRNELYSDAIDMFVKLITDTEFNA----DNFTFPCVIKACTGSLDRGLGEVIHGMVIK 59
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
GL LLD++ N LI+ Y + G + A +
Sbjct: 60 MGL---------LLDVF----------------------VGNALIAMYGKFGFVDAAVKV 88
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM--VGIEPDEISIVSVLPACAQLG 263
F MP +VSW ++ISG++ G + D+ +M G+ PD ++V+VLP CA+
Sbjct: 89 FHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREV 148
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
+++G IH K L + N+L++MY KCG + +A LFD+ ++ VSW+T+IG
Sbjct: 149 DVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIG 208
Query: 324 GLANHGKAHKAIHLFHEMQ-RLKVPPNDITFIGLLSAC 360
GL G +A +LF EMQ + + N++T + +L AC
Sbjct: 209 GLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 162/350 (46%), Gaps = 38/350 (10%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++++C ++ + IH ++K L F+ +I + G + A +F +
Sbjct: 34 FPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMP 93
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
N+ +N++I ++ N ++ +M+ +LPD TL V+ CA +
Sbjct: 94 VRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEG---LLPDIATLVTVLPVCAREVDV 150
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+G +IH K GL N+L+D+Y KC
Sbjct: 151 QMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKC---------------------------- 182
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV-GIEPDEISI 252
G + +A+MLFDK VSW MI G G EA ++FR+MQM IE +E+++
Sbjct: 183 ---GYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTV 239
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+++LPAC ++ L + +H Y ++ ++ N + Y KCG + A ++F M
Sbjct: 240 LNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMET 299
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
+ V SW+ +IGG A +G KA++L+ +M + P+ T LL A AH
Sbjct: 300 KTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAH 349
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 47/231 (20%)
Query: 230 YAEALDVF-RQMQMVGIEPDEISIVSVLPACAQLGSLE--LGEWIHMYCDKNHLLRRTVI 286
Y++A+D+F + + D + V+ AC GSL+ LGE IH K LL +
Sbjct: 11 YSDAIDMFVKLITDTEFNADNFTFPCVIKACT--GSLDRGLGEVIHGMVIKMGLLLDVFV 68
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK- 345
NALI MY K G ++ A ++F M R++VSW+++I G + +G + + EM +
Sbjct: 69 GNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEE 128
Query: 346 -VPPNDITFIGLLSACAH-----------------------------------TGFWNEG 369
+ P+ T + +L CA G+ E
Sbjct: 129 GLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEA 188
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
M FD R + + + ++ L G + +A N+ EM M+ D ++
Sbjct: 189 QMLFDKNNRKNAVS-----WNTMIGGLCTKGYIFEAFNLFREMQMQEDIEV 234
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/468 (36%), Positives = 276/468 (58%), Gaps = 6/468 (1%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G + A LF ++ E +V +N M+ AY + A+ Y+++ R I ++++
Sbjct: 131 GKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLG-----IGYNEYS 185
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
++ C + L KQ H V G S+ + +++LD Y KC E+ +A ++F+EM
Sbjct: 186 FAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMI 245
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
RD++AW ++SGYA+ G ++ AR LFD MP V+WT++I+GY +AL++F +
Sbjct: 246 IRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTK 305
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M + I PD+ + S L A A + SL G+ IH Y + ++ T++ ++LI+MY KCGC
Sbjct: 306 MMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGC 365
Query: 300 INQASQLFDQMVER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ +FD M ++ DVV W+T+I LA HG+ +AI +F +M RL + P+ IT I LL+
Sbjct: 366 LEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLN 425
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H+G EGL ++S+ H + EHY CL+DLLGRAG D +N +E+MP KP+
Sbjct: 426 ACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPND 485
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
+IW +LL CR + N+E E ++ L+P+ + YVLLS+I+A GRWE V +R+L+
Sbjct: 486 EIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLM 545
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQD 526
+ ++K S IE+ N+V F + D P + I+ L+ LA H +
Sbjct: 546 NERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIYLALKQLAGHME 593
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 190/380 (50%), Gaps = 36/380 (9%)
Query: 114 LPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS-HSITENALLDLYGKCDELIEAH 172
LP K TL ++++ CA LGK +H H+ GLK ++ N L+++Y KC + A+
Sbjct: 48 LPSK-TLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAY 106
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
KVF+EM+ R++ +WN ++SGYA+LG++K AR LFDKMP +VSW M+ Y G +
Sbjct: 107 KVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCND 166
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
AL +R+++ +GI +E S +L C ++ LEL + H L VI +++++
Sbjct: 167 ALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLD 226
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWST-------------------------------V 321
Y KC + A +LFD+M+ RDV++W+T +
Sbjct: 227 AYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSL 286
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I G A H HKA+ LF +M L + P+ TF L A A N G + R +
Sbjct: 287 IAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRT-N 345
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
I L+D+ + G L+ + + M K D +W +++SS + + A+
Sbjct: 346 IRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMF 405
Query: 442 EHL--LVLEPEDTGNYVLLS 459
+ + L ++P+ VLL+
Sbjct: 406 DDMVRLGMKPDRITLIVLLN 425
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVI 286
G +A+ + GI ++ +L CA SL+LG+W+H++ L R T +
Sbjct: 29 GQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFL 88
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
N LI MY KCG A ++FD+M R++ SW+ ++ G A GK A LF +M
Sbjct: 89 ANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKM----- 143
Query: 347 PPND-ITFIGLLSACAHTGFWNEGLMYFDSMKR 378
P D +++ ++ A A +GF N+ L ++ ++R
Sbjct: 144 PEKDVVSWNTMVIAYAKSGFCNDALRFYRELRR 176
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 292/537 (54%), Gaps = 10/537 (1%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA 63
+ GA ++ + + + + C+ E ++L + + + T M+ GD+
Sbjct: 193 KSGAAAVLSVSNALIALYMKCDT-PEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVN 251
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
A +F++V ++NAMI Y + + A L+++M+ + + D+FT V
Sbjct: 252 AARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEK-----VPLDEFTFTSV 306
Query: 124 IKSCAGLLCPSLGKQIHAHVCK----FGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ +CA GK +H + + F ++ NAL+ LY K +++ A ++F+ M
Sbjct: 307 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 366
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+D+V+WN ++SGY G + KA +F MPY +SW M+SGY H G +AL +F Q
Sbjct: 367 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 426
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ ++P + + + AC +LG+L+ G +H + + NAL+ MY KCG
Sbjct: 427 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 486
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+N A +F M D VSW+ +I L HG +A+ LF +M + P+ I+F+ +L+A
Sbjct: 487 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 546
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C H G +EG YF+SMKRD I +HY L+DLLGR+GR+ +A ++I+ MP +P
Sbjct: 547 CNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPS 606
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IW ++LS CRT ++E A + L + P+ G Y+LLSN Y+ GRW D +R+RKL+R
Sbjct: 607 IWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMR 666
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
+ +KK PGCS IEV +++ F+ GD P ++++ LE++ + V D +
Sbjct: 667 DRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKF 723
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 174/344 (50%), Gaps = 23/344 (6%)
Query: 49 VTKMIDVCNSGGDLAYASLLFKQVKEP--NVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
T ++ + G L A+ F V + L+NAM+ A+ L A++++ +L
Sbjct: 97 ATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLG- 155
Query: 107 PRTGSLILPDKFTLPFVIKSCAGL--LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK 164
+GSL PD ++ +I + + L Q+H V K G + NAL+ LY K
Sbjct: 156 --SGSL-RPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMK 212
Query: 165 CDEL---IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
CD +A KV +EM D+D + W ++ GY R G + AR +F+++ V W AMI
Sbjct: 213 CDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMI 272
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH---MYCDKN 278
SGY G A+A ++FR+M + DE + SVL ACA G G+ +H + N
Sbjct: 273 SGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPN 332
Query: 279 HLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + + NAL+ +Y K G I A ++FD M +DVVSW+T++ G + G KA+ +
Sbjct: 333 FVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEV 392
Query: 338 FHEMQRLKVPP--NDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
F KV P ND++++ ++S H G + L F+ M+ +
Sbjct: 393 F------KVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE 430
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 188/518 (36%), Positives = 283/518 (54%), Gaps = 42/518 (8%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ IL++C +L L ++IHTQ++K + ++ + +ID+ G+L A + ++++
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V + AMI YT + L+ A+ L+++M I D I +CAG+
Sbjct: 478 EEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQG-----IRSDNIGFSSAISACAGIQAL 532
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ G+QIHA G D+ N L+S Y
Sbjct: 533 NQGQQIHAQSYISGYS-------------------------------EDLSIGNALVSLY 561
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR G+ + A + F+K+ +SW A+ISG+ G EAL VF QM G+E + +
Sbjct: 562 ARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFG 621
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S + A A +++ G+ IH K T N LI +Y KCG I A + F +M E+
Sbjct: 622 SAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEK 681
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+VVSW+ +I G + HG +A+ LF EM++L + PN +TF+G+LSAC+H G NEGL YF
Sbjct: 682 NVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYF 741
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM ++H + K EHY C+VDLLGRA L A IEEMP++PDA IW +LLS+C + N
Sbjct: 742 RSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKN 801
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+EI A HLL LEPED+ YVLLSN+YA G+W+ R R++++ + +KK PG S IE
Sbjct: 802 IEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIE 861
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
V N + F GD P + I+ ++ L +RA ++
Sbjct: 862 VKNSIHAFFVGDRLHPLAEQIYEYIDDL---NERAGEI 896
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 197/421 (46%), Gaps = 57/421 (13%)
Query: 17 FVPILQSCENLIEL----KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
F +L +C IEL +++H I+K+ LS F+ ++ + + G+L A +F ++
Sbjct: 216 FSSVLSACTK-IELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM 274
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ YN++I A+ L+++M D + PD T+ ++ +CA +
Sbjct: 275 HRRDRISYNSLISGLAQRGFSDRALQLFEKMQLD-----CMKPDCVTVASLLSACASVGA 329
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
GKQ+H++V K G+ S I E +LLDLY KC ++ AH+ F ++V WN
Sbjct: 330 GYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWN----- 384
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
M+ Y +G+ +E+ +F QMQ+ G+ P++ +
Sbjct: 385 --------------------------VMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
S+L C LG+L+LGE IH K+ +C+ LI+MY K G ++ A + ++ E
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLRE 478
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
DVVSW+ +I G H +A+ LF EM+ + ++I F +SACA N+G
Sbjct: 479 EDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG--- 535
Query: 373 FDSMKRDHHIEHKIEHYG-------CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ H + I Y LV L R GR A E++ K D W +L+
Sbjct: 536 -----QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAK-DNISWNALI 589
Query: 426 S 426
S
Sbjct: 590 S 590
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 229/513 (44%), Gaps = 90/513 (17%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
++ + + C N L++ KK+H +I K + L +++ID+ + G++ A LF +
Sbjct: 13 YLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIP 72
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
NV +N +I L + L+ M+ + T PD+ T V+++C+G P
Sbjct: 73 SSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVT-----PDESTFASVLRACSGGKAP 127
Query: 134 -SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+ +QIHA + G S + N L+DLY K
Sbjct: 128 FQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKN--------------------------- 160
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
G + A+++F+++ VSW AMISG + G EA+ +F QM + P
Sbjct: 161 ----GHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVF 216
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
SVL AC ++ +LGE +H + K L T +CNAL+ +Y + G + A Q+F +M
Sbjct: 217 SSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHR 276
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
RD +S++++I GLA G + +A+ LF +MQ + P+ +T LLSACA G +G
Sbjct: 277 RDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQL 336
Query: 373 FD-----SMKRDHHIEHKIEHYGCLVDL-------------------------------L 396
M D IE G L+DL
Sbjct: 337 HSYVIKMGMSSDLIIE------GSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAY 390
Query: 397 GRAGRLDQALNIIEEMPMK---PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
G+ G L ++ I +M ++ P+ + S+L +C + L++ H V++
Sbjct: 391 GQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG--EQIHTQVIKSGFQF 448
Query: 454 N-YV--LLSNIYAKHGRWEDVSRMRKLIRSKSM 483
N YV +L ++YAKHG + + + +R + +
Sbjct: 449 NVYVCSVLIDMYAKHGELDTARGILQRLREEDV 481
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 183/396 (46%), Gaps = 38/396 (9%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
K++H+ ++K +S + ++D+ D+ A F + NV L+N M+ AY
Sbjct: 334 KQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQL 393
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ ++ QM + ++P+++T P ++++C L LG+QIH V K G +
Sbjct: 394 GNLSESYWIFLQMQIEG-----LMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQF 448
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+ + L+D+Y K EL A + + + + D+V+W +I+G
Sbjct: 449 NVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAG------------------ 490
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
YT +AEAL +F++M+ GI D I S + ACA + +L G+
Sbjct: 491 -------------YTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ 537
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
IH + I NAL+ +Y +CG A F+++ +D +SW+ +I G A G
Sbjct: 538 IHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGH 597
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+A+ +F +M + V N TF +SA A+T +G M + + + + E
Sbjct: 598 CEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGY-DSETEASN 656
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
L+ L + G ++ A EMP K + W ++++
Sbjct: 657 VLITLYSKCGSIEDAKREFFEMPEK-NVVSWNAMIT 691
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 195/419 (46%), Gaps = 46/419 (10%)
Query: 14 EDRFVPILQSCEN----LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLF 69
E F +L++C ++IH +I+ + S + +ID+ + G + A L+F
Sbjct: 111 ESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVF 170
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+++ + + AMI + N AI L+ QM + S ++P + V+ +C
Sbjct: 171 ERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHK-----SAVIPTPYVFSSVLSACTK 225
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
+ LG+Q+H + K+GL S + NAL+ LY + LI A ++F +M RD +++N+L
Sbjct: 226 IELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSL 285
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
ISG A+ G +A LF+K MQ+ ++PD
Sbjct: 286 ISGLAQRGFSDRALQLFEK-------------------------------MQLDCMKPDC 314
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+++ S+L ACA +G+ G+ +H Y K + +I +L+++Y+KC I A + F
Sbjct: 315 VTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLT 374
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
+VV W+ ++ G ++ +F +MQ + PN T+ +L C G + G
Sbjct: 375 TETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG 434
Query: 370 LMYFDSMKRDHHIEHKIEHYGC--LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + + Y C L+D+ + G LD A I++ + + D W ++++
Sbjct: 435 EQIHTQVIKSG---FQFNVYVCSVLIDMYAKHGELDTARGILQRL-REEDVVSWTAMIA 489
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ GI + + + + C GSL + +H K+ V+ + LI++Y+ G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++ A +LFD + +V W+ VI GL A + + LF M V P++ TF +L A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-------C--LVDLLGRAGRLDQALNIIE 410
C+ G F ++ H KI H+G C L+DL + G +D A + E
Sbjct: 121 CSG------GKAPFQVTEQIH---AKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFE 171
Query: 411 EMPMKPDAKIWGSLLS 426
+ +K D+ W +++S
Sbjct: 172 RLFLK-DSVSWVAMIS 186
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 281/497 (56%), Gaps = 36/497 (7%)
Query: 26 NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
NL +++++H Q + + Q+ + K++ + L A LF + + ++ M+
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
+ Y +++++R G+ PD +TLPFVI++C L +G+ IH V K
Sbjct: 810 GFAKVGDYMNCFGTFRELIR---CGAR--PDNYTLPFVIRACRDLKNLQMGRLIHHIVYK 864
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
FGL AL+D+YGKC E+ + AR L
Sbjct: 865 FGLDLDHFVCAALVDMYGKCREI-------------------------------EDARFL 893
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
FDKM +V+WT MI GY G+ E+L +F +M+ G+ PD++++V+V+ ACA+LG++
Sbjct: 894 FDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 953
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
I Y + ++ A+I+M+ KCGC+ A ++FD+M E++V+SWS +I
Sbjct: 954 HKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAY 1013
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
HG+ KA+ LF M R + PN IT + LL AC+H G EGL +F M D+ +
Sbjct: 1014 GYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXD 1073
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
++HY C+VDLLGRAGRLD+AL +I M + D +WG+ L +CRT+ ++ +A A LL
Sbjct: 1074 VKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLL 1133
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
L+P++ G+Y+LLSNIYA GRWEDV+++R L+ + +KK PG + IEV+N+ +F GD
Sbjct: 1134 ELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGD 1193
Query: 506 DTKPFLKDIFWLLELLA 522
T P K+I+ +L+ L
Sbjct: 1194 TTHPRSKEIYEMLKSLG 1210
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 284/506 (56%), Gaps = 36/506 (7%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
++ L +C NL +++++H Q + + ++ + K+I + L A LF + +
Sbjct: 65 YISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRD 124
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++ M+ + G IN + R G+ PD +TLPFVI++C L +G
Sbjct: 125 SVSWSVMVGGFAK---VGDYINCFGTFRELIRCGAR--PDNYTLPFVIRACRDLKNLQMG 179
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ IH V KFGL AL+D+Y KC E+
Sbjct: 180 RLIHHIVYKFGLDLDHFVCAALVDMYVKCREI---------------------------- 211
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+ AR LFDKM +V+WT MI GY G E+L +F +M+ G+ PD++++V+V+
Sbjct: 212 ---EDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVV 268
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA+LG++ I Y + ++ A+I+MY KCGC+ A ++FD+M E++V+
Sbjct: 269 FACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVI 328
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SWS +I HG+ KA+ LF M + P+ IT LL AC+H G EGL +F SM
Sbjct: 329 SWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSM 388
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
D+ + ++HY C+VDLLGRAGRLD+AL +I+ M ++ D +WG+ L +CRT+ ++ +
Sbjct: 389 WEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVL 448
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A A LL L+ ++ G+YVLLSNIYA GRWEDV+++R L+ + +KKTPG + IEV+N
Sbjct: 449 AEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDN 508
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLA 522
+ +F GD T P K+I+ +L+ L+
Sbjct: 509 KSHQFSVGDTTHPRSKEIYEMLKSLS 534
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 161/357 (45%), Gaps = 48/357 (13%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
++++C +L L + IH + K+ L +F+ ++D+ ++ A LF ++ E +
Sbjct: 842 VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERD 901
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ + MI Y ++ L+ +M + ++PDK + V+ +CA L
Sbjct: 902 LVTWTVMIGGYAECGNANESLVLFDKMREEG-----VVPDKVAMVTVVFACAKLGAMHKA 956
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ I ++ + + I A++D++ KC + A ++F+ M ++++++W+ +I+ Y
Sbjct: 957 RTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 1016
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
GQ +K ALD+F M GI P++I++VS+L
Sbjct: 1017 GQGRK-------------------------------ALDLFPMMLRSGILPNKITLVSLL 1045
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGCINQASQLFDQMV-ERD 314
AC+ G +E G +++ +R V ++++ + G +++A +L M E+D
Sbjct: 1046 YACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKD 1105
Query: 315 VVSWSTVIGGLANHGK---AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
W +G H A KA E+Q P N +I L + A+ G W +
Sbjct: 1106 EGLWGAFLGACRTHKDVXLAEKAATSLLELQ----PQNPGHYILLSNIYANAGRWED 1158
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 290/504 (57%), Gaps = 50/504 (9%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL-----LFKQVKEPN 76
Q +L LK+ H IL+ Q +++ ++ + Y S +F V++PN
Sbjct: 63 QCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 122
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
VFL+N MI+ N+ AI LY +M+ + P+K+T P V+K+C+ + G
Sbjct: 123 VFLWNCMIKVCIENNEPFKAILLYYEMMV-----AHFRPNKYTYPAVLKACSDAGVVAEG 177
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
Q+HAH+ K GL ++ + +Y L+EA ++ ++ +
Sbjct: 178 VQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDD-----------------KG 220
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G++ M K G + EAL++F QMQ I P + + SVL
Sbjct: 221 GEVDAVCMPDRK-------------------GCFMEALEIFHQMQKEKIRPRKFVLPSVL 261
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA LG+L+ G WIH Y +N + V+ +L++MY KCG I+ A ++F++M ++V
Sbjct: 262 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 321
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+ +IGGLA HG+A AI LF +M + PN+ITF+G+L+ACAH G +GL F+SM
Sbjct: 322 SWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSM 378
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
++++ +E +IEHYGC+VDLLGRAG L +A ++ +P +P +WG+LL +CR + N+E+
Sbjct: 379 RKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVEL 438
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN- 495
+ LL LEP+++G Y LLSNIYAK GRWE+V +RKL++ + +K TPG S+I++
Sbjct: 439 GERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGR 498
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLE 519
EV +F+ GD + P +KDI+ +L+
Sbjct: 499 GEVHKFIIGDGSHPQVKDIYQMLD 522
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/484 (36%), Positives = 268/484 (55%), Gaps = 46/484 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+A A LF +VF + A++ Y N + A ++ M PDK
Sbjct: 307 GDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAM-----------PDK-- 353
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
++++ NA++ Y + + EA ++F+ M
Sbjct: 354 -------------------------------NAVSWNAMMAAYVQRRMMEEAKELFDAMP 382
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
R++ +WN +++GYA+ G + +AR +F MP VSW AM++ Y+ IG E L +F++
Sbjct: 383 CRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKE 442
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M G + + VL CA + +LE G +H K + NAL+ MY KCG
Sbjct: 443 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGS 502
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ +A F++M ERDVVSW+T+I G A HG +A+ +F M++ P+DIT +G+L+A
Sbjct: 503 MEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAA 562
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H+G +G+ YF SM RD + K EHY C++DLLGRAGRLD+A+N++++MP +PD+
Sbjct: 563 CSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDST 622
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
+WG+LL + R + N E+ A E + LEPE+ G YVLLSNIYA G+W DV +MR ++
Sbjct: 623 MWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMH 682
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV--IDIMYE 537
+ +KK PG S IEV N+V F GD P +DI+ LE L + +A V D++
Sbjct: 683 ERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLH 742
Query: 538 DIGE 541
D+ E
Sbjct: 743 DVEE 746
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 182/406 (44%), Gaps = 50/406 (12%)
Query: 36 QILKYLLS---QSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
Q L + S +F ++ LA LF ++ + YN MI ++ N+ L
Sbjct: 156 QALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGL 215
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL-GKQIHAHVCKFGLKSH 151
LA + + + P+K + S G+L + +I F ++
Sbjct: 216 VSLARHYFD-----------LAPEKDAV-----SWNGMLAAYVRNGRIQEARELFDSRTE 259
Query: 152 --SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+I+ NAL+ Y + ++ EA K+F +M RD+V+WN ++SGYAR G M +AR LFD
Sbjct: 260 WDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVA 319
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE--ISIVSVLPACAQLGSLEL 267
P + +WTA++SGY G EA VF M PD+ +S +++ A Q +E
Sbjct: 320 PIRDVFTWTAIVSGYAQNGMLEEAKRVFDAM------PDKNAVSWNAMMAAYVQRRMMEE 373
Query: 268 GEWIH--MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+ + M C R N ++ Y + G +++A +F M ++D VSW+ ++
Sbjct: 374 AKELFDAMPC------RNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAY 427
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
+ G + + + LF EM R N F +LS CA G+ + + +
Sbjct: 428 SQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGY---- 483
Query: 386 IEHYGCLVD-----LLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
GC V + + G +++A + EEM + D W ++++
Sbjct: 484 --GVGCFVGNALLAMYFKCGSMEEAHSAFEEMEER-DVVSWNTMIA 526
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 160/345 (46%), Gaps = 29/345 (8%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
++ + +S M+ + G L A F+ + P+ F YN ++ A +
Sbjct: 128 RLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSLAD 187
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
L+ +M + D + +I S A SL + H + +++
Sbjct: 188 VRALFDEM---------PVKDSVSYNVMISSHANHGLVSLAR----HYFDLAPEKDAVSW 234
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
N +L Y + + EA ++F+ T+ D ++WN L++GY + Q+++A+ +F+KMP +V
Sbjct: 235 NGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVV 294
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI-HMY 274
SW M+SGY G AEA +F V D + +++ AQ G LE + +
Sbjct: 295 SWNTMVSGYARRGDMAEARRLFD----VAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAM 350
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
DKN V NA++ Y++ + +A +LFD M R+V SW+T++ G A G +A
Sbjct: 351 PDKN-----AVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEA 405
Query: 335 IHLFHEMQRLKVPPND-ITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+F M P D +++ +L+A + GF E L F M R
Sbjct: 406 RAIFGMM-----PQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGR 445
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 41/306 (13%)
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ + T N +L Y L +A F + D ++N L+ + R LFD+
Sbjct: 135 RRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDE 194
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
MP VS+ MIS + + G + A F + E D +S +L A + G ++
Sbjct: 195 MPVKDSVSYNVMISSHANHGLVSLARHYFD----LAPEKDAVSWNGMLAAYVRNGRIQ-- 248
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
E ++ + + NAL+ Y++ I +A ++F++M +RDVVSW+T++ G A
Sbjct: 249 EARELFDSRTEW--DAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARR 306
Query: 329 GKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE---- 383
G +A LF P D+ T+ ++S A G E FD+M + +
Sbjct: 307 GDMAEARRLFD-----VAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAM 361
Query: 384 ----------------------HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
+ + ++ +AG LD+A I MP K DA W
Sbjct: 362 MAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQK-DAVSW 420
Query: 422 GSLLSS 427
++L++
Sbjct: 421 AAMLAA 426
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 43/276 (15%)
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D +++ N I+ + R G++ A LF MP + ++ M++GY G +AL FR
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSL--------------ELGEWIHMYCDKNHLL---- 281
+ PD S ++L A SL + + + NH L
Sbjct: 164 IP----RPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLA 219
Query: 282 ---------RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ V N ++ Y++ G I +A +LFD E D +SW+ ++ G +
Sbjct: 220 RHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIE 279
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK-RDHHIEHKIEHYGC 391
+A +F++M + V +++ ++S A G E FD RD + +
Sbjct: 280 EAQKMFNKMPQRDV----VSWNTMVSGYARRGDMAEARRLFDVAPIRD------VFTWTA 329
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+V + G L++A + + MP K +A W +++++
Sbjct: 330 IVSGYAQNGMLEEAKRVFDAMPDK-NAVSWNAMMAA 364
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 282/492 (57%), Gaps = 6/492 (1%)
Query: 34 HTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK-EPNVFLYNAMIRAYTNNHL 92
H +K + F+ ++ S G L + LF ++ NV +N MI
Sbjct: 130 HGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGE 189
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
A L+++M R +L D FT ++ C+ +G+ +H H+ G +
Sbjct: 190 TSEACALFREMRRQG-----VLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDL 244
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
I NAL+D+YGKC +L AH+ F+ M +++V+W +++ A+ G + AR F++MP
Sbjct: 245 ILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPER 304
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
I+SW AMIS Y G + E L ++ +M+ +G+ PDE+++ VL Q G L G IH
Sbjct: 305 NIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIH 364
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
Y + + N+LI+MY +CG ++ + LF +M ++ +SW+ +IG LA HG+A
Sbjct: 365 CYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQ 424
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+A+ F M P++ITF+GLLSAC+H G +G YF +M+ ++++ ++EHY C+
Sbjct: 425 EAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACM 484
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VDLLGR G L +A+++I++MPMKPD +WG+L+ +CR + ++EI +A++ LL LE +
Sbjct: 485 VDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGING 544
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLK 512
G +VL+SN+ + +WED+ R+RKL+R + KK G S IE+NN + EF D
Sbjct: 545 GLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSIHEFGVEDIRHESSS 604
Query: 513 DIFWLLELLALH 524
I+ ++ LA H
Sbjct: 605 QIYAAVDQLAYH 616
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 236/540 (43%), Gaps = 116/540 (21%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID----VCNSGGDLA--YASLLFKQVK 73
+LQ C ++ L ++H +L + S +V +++ + GD+A +A +F +V
Sbjct: 9 LLQQCRSIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMFDRVP 68
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+P+ F YN++IRAY+N+ A+ L++ +LR ILP++FTLPFV+K+C+
Sbjct: 69 DPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRG-----ILPNEFTLPFVLKACSRARAA 123
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD-RDIVAWNNLISG 192
H K G NALL L ++ ++F EM R++V+WN +I G
Sbjct: 124 EHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGG 183
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
A+ G+ +EA +FR+M+ G+ D +
Sbjct: 184 CAQAGET-------------------------------SEACALFREMRRQGVLADVFTF 212
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
VS+L C++ G+LE+G +H + + ++ NAL++MY KCG + A + FD M
Sbjct: 213 VSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPI 272
Query: 313 RDVVSWSTVIGGLANHGKAHKA-------------------------------IHLFHEM 341
++VVSW++++ LA HG A + L++ M
Sbjct: 273 KNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRM 332
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+ L + P+++T G+LS G G M +D + + L+D+ R G+
Sbjct: 333 KSLGLTPDEVTLAGVLSVHGQNGDLASGRM-IHCYIQDSFSDPGVTVLNSLIDMYARCGQ 391
Query: 402 LDQALNIIEEMPMK----------------------------------PDAKIWGSLLSS 427
+D ++++ EMP K PD + LLS+
Sbjct: 392 VDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSA 451
Query: 428 CRTYSNLEIA---VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
C LE AM H+ ++PE +Y + ++ +HG +++ LI+ MK
Sbjct: 452 CSHGGLLEDGQYYFKAMRHIYNVKPE-VEHYACMVDLLGRHGH---LAKAVDLIKDMPMK 507
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 166/340 (48%), Gaps = 16/340 (4%)
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+VA +SG A + AR +FD++P ++ ++I Y++ G EAL + R +
Sbjct: 41 LVASYCALSGRAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLR 100
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
GI P+E ++ VL AC++ + E H K +R+ + NAL+ G +
Sbjct: 101 RGILPNEFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRD 160
Query: 303 ASQLFDQMV-ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+ +LF +M R+VVSW+T+IGG A G+ +A LF EM+R V + TF+ LL C+
Sbjct: 161 SRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCS 220
Query: 362 HTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
G G L++ + ++ + + LVD+ G+ G L A + MP+K +
Sbjct: 221 KEGNLEVGRLVHCHMLASGSRVDLILGN--ALVDMYGKCGDLWMAHRCFDVMPIK-NVVS 277
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPE-DTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
W S+L + + +++ A E + PE + ++ + + Y + GR+ + + R
Sbjct: 278 WTSMLCALAKHGSVDAARDWFEQM----PERNIISWNAMISCYVQGGRFPETLGLYN--R 331
Query: 480 SKSMKKTPG----CSLIEVNNEVQEFVSGDDTKPFLKDIF 515
KS+ TP ++ V+ + + SG +++D F
Sbjct: 332 MKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSF 371
>gi|326518042|dbj|BAK07273.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 284/471 (60%), Gaps = 9/471 (1%)
Query: 28 IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
+E +K H LK + + ++D+ G L A +F ++ + V ++N M+R Y
Sbjct: 63 VEGRKAHAATLKTGFRWDAYTASSLMDMYTMLGRLEAARKVFDEMPQRAVVVWNMMLRCY 122
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG 147
A+ L ++M R T PD+ TL + +C+ SLG++IHA++ G
Sbjct: 123 VRCGRNTEAVALAEEMERGRLT-----PDRVTLLTALTACSRAGDLSLGRKIHAYM--DG 175
Query: 148 LKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
+ S+ NALLD+Y K L EA +FE+M R++V+W L+SGYA GQ+ KAR+LF
Sbjct: 176 VTGFSLPVANALLDMYVKNGCLEEAVNLFEKMPSRNVVSWTTLVSGYAFAGQVDKARLLF 235
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
+ ++ WTAMI+ Y G + EAL +FR MQM IEPD ++V++L CA LG+L+
Sbjct: 236 HQCTEKDLIMWTAMINAYVQHGCFIEALSLFRDMQMHQIEPDRFTVVTLLTCCANLGALD 295
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
G+ IH + + ++ V+ ALI+MY KCG + ++ ++F++M RD +W+ +I GLA
Sbjct: 296 QGQLIHQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSVEVFERMEGRDTKAWTAIICGLA 355
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+G+A +A+ LF +M+R + P+ +TFIG+LSAC H G +EG F +MK + I ++
Sbjct: 356 TNGQAGRALELFEDMERSEAKPDSVTFIGVLSACCHGGLVDEGRKQFRAMKEVYRIRPRV 415
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA-KIWGSLLSSCRTYSNLEIAVIAMEHLL 445
EHY CLV+LLGRAG+LD+A +I+ +P+ DA ++G+L+++C+ N++++ + +
Sbjct: 416 EHYSCLVNLLGRAGQLDEAEKLIKSIPINKDAMPLFGALITACKAQGNVKMSERLTKRIG 475
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ +L+SN+YA RWEDV R+R + S+KK GCSLIEV
Sbjct: 476 KQGYQIPDVNLLMSNVYATASRWEDVVRVRSKMAHPSVKKNAGCSLIEVKG 526
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 165/350 (47%), Gaps = 67/350 (19%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
++ D FT PFV+++ L G++ HA K G + + T ++L+D+Y L A
Sbjct: 42 LVADSFTYPFVLRAIGALQISVEGRKAHAATLKTGFRWDAYTASSLMDMYTMLGRLEAAR 101
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
KVF+EM R +V WN ++ Y R G+ E
Sbjct: 102 KVFDEMPQRAVVVWNMMLRCYVRCGR-------------------------------NTE 130
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
A+ + +M+ + PD +++++ L AC++ G L LG IH Y D V NAL++
Sbjct: 131 AVALAEEMERGRLTPDRVTLLTALTACSRAGDLSLGRKIHAYMDGVTGFSLPV-ANALLD 189
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHE------------ 340
MY+K GC+ +A LF++M R+VVSW+T++ G A G+ KA LFH+
Sbjct: 190 MYVKNGCLEEAVNLFEKMPSRNVVSWTTLVSGYAFAGQVDKARLLFHQCTEKDLIMWTAM 249
Query: 341 -------------------MQRLKVPPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDH 380
MQ ++ P+ T + LL+ CA+ G ++G L++ + R+
Sbjct: 250 INAYVQHGCFIEALSLFRDMQMHQIEPDRFTVVTLLTCCANLGALDQGQLIHQFAEGRNM 309
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
++ + L+D+ + G +++++ + E M + D K W +++ T
Sbjct: 310 KLDAVLGT--ALIDMYAKCGHVEKSVEVFERMEGR-DTKAWTAIICGLAT 356
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 6/238 (2%)
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
S+A+ + V+ ++ G+ D + VL A L G H K +
Sbjct: 26 SHADVMAVYYDLRERGLVADSFTYPFVLRAIGALQISVEGRKAHAATLKTGFRWDAYTAS 85
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
+L++MY G + A ++FD+M +R VV W+ ++ G+ +A+ L EM+R ++ P
Sbjct: 86 SLMDMYTMLGRLEAARKVFDEMPQRAVVVWNMMLRCYVRCGRNTEAVALAEEMERGRLTP 145
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ +T + L+AC+ G + G M D + L+D+ + G L++A+N+
Sbjct: 146 DRVTLLTALTACSRAGDLSLGRKIHAYM--DGVTGFSLPVANALLDMYVKNGCLEEAVNL 203
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
E+MP + + W +L+S ++ A + +D + + N Y +HG
Sbjct: 204 FEKMPSR-NVVSWTTLVSGYAFAGQVDKARLLFHQ---CTEKDLIMWTAMINAYVQHG 257
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 154/366 (42%), Positives = 250/366 (68%), Gaps = 3/366 (0%)
Query: 161 LYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
+Y KC L A K+F+EM ++++ W +++SGY G++ KAR LF++ P +V WTAM
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
I+GY + EA+ +F++MQ+ ++PD+ +V++L CAQ+G+LE G WIH Y D+ +
Sbjct: 61 INGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGI 120
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
V+ +LIEMY KCGCI +A ++F + E+D +W+++I GLA +GK KA+ LF +
Sbjct: 121 PVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALELFSK 180
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
M++++ P+++TFIG+LSAC+H G EG +F+SM ++IE K+EHYGCL+DLLGRAG
Sbjct: 181 MKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRAG 240
Query: 401 RLDQALNIIEEMPMKPD---AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
+LD+A +I+++ + ++GSLLS+CR Y N+++ E L+ +E D+ + L
Sbjct: 241 QLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESRDSSVHTL 300
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWL 517
L+NIYA GRW DV+R+R+ ++ +KK PGCS IEV+ V EF+ G+ + +++I+ +
Sbjct: 301 LANIYASAGRWVDVNRVRREMKDLGVKKVPGCSSIEVDGIVHEFLVGNPSCSEMREIYSM 360
Query: 518 LELLAL 523
L+ + L
Sbjct: 361 LDRMRL 366
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 146/321 (45%), Gaps = 40/321 (12%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T M+ + G+L A LF++ +V L+ AMI Y + + A+ L+++M
Sbjct: 27 TSMVSGYVNYGELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVALFQEM-----Q 81
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ PDKF L ++ CA + G IH ++ + G+ ++ +L+++Y KC +
Sbjct: 82 IQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIE 141
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A ++F + ++D W ++I G A G+ KA LF KM
Sbjct: 142 KALRIFCGLREKDTATWTSIICGLAMNGKTSKALELFSKM-------------------- 181
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICN 288
+Q++ + PDE++ + VL AC+ G +E G E+ + ++ +
Sbjct: 182 --------KQVEAI---PDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYG 230
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKV 346
LI++ + G +++A +L ++V + + G L + + +K + + + Q +K+
Sbjct: 231 CLIDLLGRAGQLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKI 290
Query: 347 PPNDITFIGLLSAC-AHTGFW 366
D + LL+ A G W
Sbjct: 291 ESRDSSVHTLLANIYASAGRW 311
>gi|125573086|gb|EAZ14601.1| hypothetical protein OsJ_04525 [Oryza sativa Japonica Group]
Length = 616
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 253/375 (67%), Gaps = 9/375 (2%)
Query: 158 LLDLYGKCDELIE-AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
++D YG+ ++ A ++F++M DRD+V WN++I GYAR G+M +AR+LF++MP ++S
Sbjct: 218 MIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVIS 277
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W+ +I GY G EAL+ F++M GI+PD ++ V + ACAQLG+LE G W+H Y +
Sbjct: 278 WSIVIDGYVRFGEPNEALEFFQRMLRCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLE 337
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
K +L V+ ALI+MY+KCG ++ A +F+ M ++ VV+W+ +I GL HG AI
Sbjct: 338 KKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIK 397
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF++M+ + P +D++ + +L++C H G +EGL F M++D +E K+EHYG L+DLL
Sbjct: 398 LFNQMETERAPMDDLSILAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLL 457
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
GRAGR+DQA N IE MPM+P ++WGSLL+SCR++ +E+A +++E L L +D+G YV
Sbjct: 458 GRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYV 517
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKD--- 513
LLSNIYA G W+DV R+RKL+ ++ MKK G S+IEV+ ++ EFV+G + +
Sbjct: 518 LLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVDGQIHEFVNGVSSPDYYPASLV 577
Query: 514 -----IFWLLELLAL 523
+FW LA
Sbjct: 578 QEHEVLFWRFGTLAF 592
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
MID G + A +LF+++ E NV ++ +I Y A+ +++MLR
Sbjct: 248 NSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLR---- 303
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I PD+ + +CA L G+ +H+++ K + + + AL+D+Y KC L
Sbjct: 304 -CGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLD 362
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYT 225
A +FE M + +V WN +I G G A LF++M +S A+++ T
Sbjct: 363 LAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCT 422
Query: 226 HIGSYAEALDVFRQMQM-VGIEP 247
H G +E L +F +M+ +G+EP
Sbjct: 423 HAGLVSEGLGIFYRMEKDLGLEP 445
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQM--LRD 106
T +ID+ G L A L+F+ + + +V +N MI H YGL AI L+ QM R
Sbjct: 349 TALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGL-GTHGYGLDAIKLFNQMETERA 407
Query: 107 PRTGSLILPDKFTLPFVIKSC--AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK 164
P D ++ V+ SC AGL+ LG + GL+ AL+DL G+
Sbjct: 408 PM-------DDLSILAVLTSCTHAGLVSEGLGI-FYRMEKDLGLEPKVEHYGALIDLLGR 459
Query: 165 CDELIEAHKVFEEM 178
+ +A E M
Sbjct: 460 AGRVDQARNTIETM 473
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 262/434 (60%), Gaps = 13/434 (2%)
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH--AHVCKF---GLKSH 151
+L+ ++LR R G L LPF A + AH F G H
Sbjct: 126 FHLFSRILRTARGGELPF-----LPFAFSPLAKSAAAARSLPAAQAAHAVSFLVGGFDKH 180
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
EN+L+ Y C ++ A KVF+EM +D++ W +++ Y+R M A +F + P
Sbjct: 181 RFVENSLIGAYIACGDVGAARKVFDEMVVKDVICWTSIVVAYSRSRDMGSAEEVFGQCPV 240
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI 271
+V+WTAM++GY +AL+VF +M +GI DE+S+ + ACAQLG+++ W+
Sbjct: 241 KDMVAWTAMVTGYAQNAMPMKALEVFDRMTALGIGIDEVSLTGAISACAQLGAVKRAAWV 300
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
+ N V+ + L++MY KCG I++A ++FD M E++V ++S+++ GLA+HG+A
Sbjct: 301 QEIAEMNGFGMNVVVGSGLVDMYAKCGLIDEACKVFDGMQEKNVYTYSSMVVGLASHGRA 360
Query: 332 HKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+AI LF +M +R V PN +TFIG+L+AC+H G +G YF MK + I +HY
Sbjct: 361 REAIALFKDMVRRADVAPNHVTFIGVLTACSHAGMVTDGRYYFAQMKDKYGILPSADHYT 420
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C+VDLLGRAG +D+AL+++ M ++P +WG+LL +CR + E+A +A EHL LEPE
Sbjct: 421 CMVDLLGRAGLVDEALDLVRSMTVEPHGGVWGALLGACRIHGKTEVAKVAAEHLFKLEPE 480
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE-VQEFVSGDDTKP 509
GNYVLLSN A G+W++VS++RK++RS+ +KK P S E + V +F +GD++ P
Sbjct: 481 GIGNYVLLSNTLAAAGKWDEVSKVRKVMRSRRLKKVPAVSWFEGRDGLVHQFFAGDNSHP 540
Query: 510 FLKDI-FWLLELLA 522
++I LLEL+A
Sbjct: 541 RTREIKKALLELVA 554
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 187/534 (35%), Positives = 296/534 (55%), Gaps = 60/534 (11%)
Query: 19 PILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
PI +SC +L+ + K++H+ +++Y S F +I+ DL A L+F +
Sbjct: 101 PIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVK 160
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLR-----------------DPRTGSLIL---- 114
+ YN +I AY+ + A L+ +M D G +I
Sbjct: 161 DTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQ 220
Query: 115 -----PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
P++ TL V+ CA L +G +I L S+ I A+L++Y KC
Sbjct: 221 DEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKC---- 276
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G + R++FD M +V+W+AMI+GY G
Sbjct: 277 ---------------------------GAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGR 309
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
EAL++F M+ I+P+++++VSVL ACAQLGS+E GE I Y + L+ + +A
Sbjct: 310 SNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASA 369
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
L+ MY KCG I +A Q+FD++ +RD V+W+++I GLA +G A AI L++ M+ ++V PN
Sbjct: 370 LLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPN 429
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+ITF+GL++AC H G GL +F SM+ DH+I IEH+ C+VDL R+GRL A I
Sbjct: 430 NITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFI 489
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
M ++P+ IWG+LLS+ R + N+E+A +A + LL LEP+++GNYV+LSNIYA GRW+
Sbjct: 490 CRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQ 549
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
+ ++RKL++ K ++K S +EV + V +F+ GD + P +++ ++ LAL
Sbjct: 550 EALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTIDGLAL 603
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 227/413 (54%), Gaps = 11/413 (2%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
+E + +L + +LK+I I+ LS + + ++++ + YA +F Q+
Sbjct: 1 MERYLIDLLHCSLPINQLKQIQALIIIKYLSLTPLFIRRLLN----ASFIQYARQVFDQI 56
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
P+ ++ + I AY+ L A+ + M ++ + FT+P + KSCA LL
Sbjct: 57 PHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNN-----VRIVCFTIPPIFKSCASLLA 111
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+GKQ+H+ V ++G S +NAL++ Y K ++L A +F+ + +D +A+N LIS
Sbjct: 112 IDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISA 171
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y+R G++ AR LFDKM +IVSW AMIS Y G Y + +F++MQ EP+EI++
Sbjct: 172 YSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITL 231
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+VL CA+LG LE+G I D +L ++ A++EMY+KCG ++ +FD M
Sbjct: 232 ATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMAR 291
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
RDVV+WS +I G A +G++++A+ LF M+ ++ PND+T + +LSACA G G
Sbjct: 292 RDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETG-ER 350
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
S + + L+ + + G + +A I +++P + D W S++
Sbjct: 351 IGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQR-DNVTWNSMI 402
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 284/506 (56%), Gaps = 43/506 (8%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+S L L+++H I+ L +S L+TK+I + + G + YA LF V P+ FL
Sbjct: 97 LLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFL 156
Query: 80 YNAMIRAYTNNHLYGLAIN---LYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++++++ + +G +I+ Y++ML S +T VIK+CA L LG
Sbjct: 157 FDSLLKVTSK---FGFSIDTVLFYRRMLFSGAPQS-----NYTFTSVIKACADLSALRLG 208
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K+IH+HV G S + AL+ LY K ++ A KVF+ M R I+AWN+LISGY +
Sbjct: 209 KEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQN 268
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G +P E++ +F M G +PD +IVS+L
Sbjct: 269 G-----------LP--------------------QESIGLFHLMMESGFQPDSATIVSLL 297
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
+C+QLG+L+ G W+H Y D N V+ +LI MY +CG +++A ++FD M ER+VV
Sbjct: 298 SSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVV 357
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+ +I G HG +A+ LF EM+ PN+ITF+ +LSACAH+G ++G F SM
Sbjct: 358 TWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSM 417
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE-MPMKPDAKIWGSLLSSCRTYSNLE 435
K + + +EH C+VD+ GRAG L+ A I++ +P +P +W S+L +CR + N +
Sbjct: 418 KEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFD 477
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ V EH+L +EPE+ G+YV+LSNIYA GR + V +R ++ + +KK G S IE+N
Sbjct: 478 LGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEIN 537
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELL 521
+ F GD + P I+ L+ L
Sbjct: 538 RKTYLFSMGDKSHPQTNTIYRYLDEL 563
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 143/318 (44%), Gaps = 42/318 (13%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++++C +L L K+IH+ ++ ++ +I + D+ A +F +
Sbjct: 192 FTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMP 251
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ + +N++I Y N L +I L+ M+ S PD T+ ++ SC+ L
Sbjct: 252 QRTIIAWNSLISGYDQNGLPQESIGLFHLMME-----SGFQPDSATIVSLLSSCSQLGAL 306
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G +H + G D ++V +LI+ Y
Sbjct: 307 DFGCWLHDYADGNGF-------------------------------DLNVVLGTSLINMY 335
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
R G + KAR +FD M +V+WTAMISGY G +A+++F +M+ G P+ I+ V
Sbjct: 336 TRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFV 395
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA-LIEMYIKCGCINQASQLFDQMVE 312
+VL ACA G ++ G + + + L V N +++M+ + G +N A Q + +
Sbjct: 396 AVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIP 455
Query: 313 RD--VVSWSTVIGGLANH 328
++ W++++G H
Sbjct: 456 KEPGPAVWTSMLGACRMH 473
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 274/468 (58%), Gaps = 38/468 (8%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G + A +F ++ +V +NA+I Y + A++L+K+M++
Sbjct: 173 TALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMK---- 228
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ V+ +CA LG+Q+H+ + GL S+ NAL+DLY KC
Sbjct: 229 -TNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKC---- 283
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LF + ++SW MI GYTH+
Sbjct: 284 ---------------------------GEVETACGLFQGLSNKDVISWNTMIGGYTHLNL 316
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVIC 287
Y EAL +F++M G P++++++S+LPACAQLG+++ G WIH+Y DK + + +
Sbjct: 317 YKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLR 376
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+LI+MY KCG I A Q+F+ M R + + + +I G A HG+A+ A +F M++ +
Sbjct: 377 TSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+DITF+GLLSAC+H+G + G F SM +++ I K+EHYGC++DLLG G +A
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEE 496
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I M M+PD IW SLL +C+ + N+E+ + L+ +EPE+ G+YVLLSNIYA GR
Sbjct: 497 MINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGR 556
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
W +V+ +R L+ K MKK PGCS IE+++ V EF+ GD P ++I+
Sbjct: 557 WNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 266/484 (54%), Gaps = 30/484 (6%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC----NSGGDLAYASLLFKQVK 73
+ +L +C+ L L+ IH Q++K L +N+ ++++++ C N G L YA +F+ ++
Sbjct: 6 LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDG-LPYAISVFETIQ 64
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLC 132
EPN+ ++N M R + + AI LY M+ SL +LP+ +T PF++KSCA L
Sbjct: 65 EPNLLIWNTMFRGHALSSDPVSAIKLYVCMI------SLGLLPNSYTFPFLLKSCAKLKV 118
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
G+QIH HV K G + +L+ +Y K +AHKVF+ + RD+V++ LI+G
Sbjct: 119 SKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITG 178
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA G ++ A+ +FD++P +VSW A+ISGY G+ EALD+F++M ++PDE ++
Sbjct: 179 YASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTM 238
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V+V+ ACAQ GS++LG +H + D + L I NALI++Y KCG + A LF +
Sbjct: 239 VTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSN 298
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL-- 370
+DV+SW+T+IGG + +A+ LF EM R PND+T + +L ACA G + G
Sbjct: 299 KDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWI 358
Query: 371 -MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP----DAKIWGSLL 425
+Y D KR + + L+D+ + G ++ A + M + +A I+G +
Sbjct: 359 HVYID--KRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAM 416
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS--KSM 483
+N + + +EP+D LLS H D+ R++ RS ++
Sbjct: 417 HG---RANAAFDIFSRMRKNGIEPDDITFVGLLS--ACSHSGMLDLG--RRIFRSMTQNY 469
Query: 484 KKTP 487
K TP
Sbjct: 470 KITP 473
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 171/400 (42%), Positives = 249/400 (62%), Gaps = 7/400 (1%)
Query: 129 GLLC---PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
GL+C PS C K + N+ L + D I+A +F + D+
Sbjct: 100 GLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCP 159
Query: 186 WNNLISGYAR----LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
S R L + R+L + SWT+MI+GY G EA+ +F +M+
Sbjct: 160 DTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSWTSMIAGYVQCGKAKEAIHLFAKME 219
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
G++ +E+++V+VL ACA LG+L+LG IH Y +++ R I N LI+MY+KCGC+
Sbjct: 220 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 279
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+A ++F++M ER VVSWS +IGGLA HG+A +A+ LF +M ++ + PN +TFIGLL AC+
Sbjct: 280 EACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACS 339
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G +EG +F SM RD+ I +IEHYGC+VDLL RAG L +A I MPMKP+ +W
Sbjct: 340 HMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVW 399
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
G+LL +CR + N+E+A A++HLL L+P + G YV+LSNIYA+ GRWED +R+RK ++ +
Sbjct: 400 GALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDR 459
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+KKTPG S I V+ V EFV+G+++ P + IF E L
Sbjct: 460 QVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEEL 499
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 178/394 (45%), Gaps = 53/394 (13%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV--KEP 75
+ +L++ + EL+++H QI+K S +T++ VC YA +FK V ++P
Sbjct: 65 IDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKP 124
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
F++N+ ++A AI L+ ++ + + PD FT V+++C LL S
Sbjct: 125 ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYD-----VCPDTFTCSSVLRACLNLLDLSN 179
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD--------------- 180
G+ +H V K G +S + +++ Y +C + EA +F +M +
Sbjct: 180 GRILHGVVEKVGFRSWT----SMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLA 235
Query: 181 ------------------------RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
R++ N LI Y + G +++A +F++M T+VS
Sbjct: 236 ACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVS 295
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W+AMI G G EAL +F M VGIEP+ ++ + +L AC+ +G + G
Sbjct: 296 WSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMT 355
Query: 277 KNH-LLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKA 334
+++ ++ + ++++ + G +++A + M ++ + V W ++G H A
Sbjct: 356 RDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 415
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ L P ND ++ L + A G W +
Sbjct: 416 EEAIKHLLELD-PLNDGYYVVLSNIYAEAGRWED 448
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 171/388 (44%), Positives = 245/388 (63%), Gaps = 2/388 (0%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
N +L Y E+ EA KVF+ M RD+V+WN +I GYA G++ AR +FD
Sbjct: 27 NVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAF 86
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
SW++MIS Y EAL+++R+M I PD I++VSV+ AC+ LG+L +G +H +
Sbjct: 87 SWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFV 146
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
+ N + + ALI+MY KCG I A ++FD+M E+DV +WS++I GLANHG H+++
Sbjct: 147 ESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESL 206
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
LF +M + PN +TF+G+L AC H G +EG YF SM H IE +EHYGC+VDL
Sbjct: 207 SLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDL 266
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGR+G +++A +I M +PD IW +LL +CR + N+EIA AM L VL+P G+Y
Sbjct: 267 LGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHY 326
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
VLLSNIYA+ WE V+ MRK IR ++++ PG S IE + ++ EFVSGD P K+I+
Sbjct: 327 VLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIY 386
Query: 516 WLLELL--ALHQDRAKDVIDIMYEDIGE 541
+LE + L Q K + ++ +DI E
Sbjct: 387 RVLEEMMDRLKQAGYKPMTGLVLQDIDE 414
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 150/326 (46%), Gaps = 45/326 (13%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G++ A +F ++ + F +++MI AY + A+ L+++M + I+PD T
Sbjct: 68 GEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREM-----HAASIIPDCIT 122
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L V+ +C+ L ++G ++H V ++ AL+D+Y KC ++ A +VF+ M
Sbjct: 123 LVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMP 182
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
++D+ W+++I G A G H E+L +F +
Sbjct: 183 EKDVQTWSSMIIGLAN--------------------------HGLGH-----ESLSLFSK 211
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCG 298
M G++P+ ++ V VL AC +G + G+ ++ H + TV ++++ + G
Sbjct: 212 MISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSG 271
Query: 299 CINQASQLFDQMV-ERDVVSWSTVIGGLANHGKAHKAIHLFHE-MQRLKV--PPNDITFI 354
+ +A QL M E D + W ++G + HK + + E M +L+V P D ++
Sbjct: 272 HVEEARQLIRSMTFEPDTIIWRALLGAC----RIHKNVEIAEEAMAKLRVLDPLGDGHYV 327
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDH 380
L + A W +++RD+
Sbjct: 328 LLSNIYAQANSWEGVAEMRKTIRRDN 353
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V ++ +C +L L ++H + + L T +ID+ GD+ A +F ++
Sbjct: 123 LVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMP 182
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V +++MI N+ L +++L+ +M+ + + P+ T V+ +C +
Sbjct: 183 EKDVQTWSSMIIGLANHGLGHESLSLFSKMISEG-----MKPNGVTFVGVLIACTHVGLV 237
Query: 134 SLGKQIHAHVCKF-GLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
S GK+ + + G++ ++DL G+ + EA ++ MT + D + W L+
Sbjct: 238 SEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLG 297
Query: 192 G 192
Sbjct: 298 A 298
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 292/521 (56%), Gaps = 13/521 (2%)
Query: 6 GALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
GALS+ + V + CE+ E + ++L + ++ + T M+ GD+ A
Sbjct: 192 GALSVC---NALVALYMKCES-PEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAA 247
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F++V ++NAMI Y ++ + A L+++M+ + + D+FT V+
Sbjct: 248 RSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLE-----RVPLDEFTFTSVLS 302
Query: 126 SCAGLLCPSLGKQIHAHVCK----FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
+CA + + GK +H + + F ++ NAL+ Y KC + A ++F+ MT +
Sbjct: 303 ACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLK 362
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
D+V+WN ++SGY + KA +F++MPY +SW M+SGY H G +AL +F +M+
Sbjct: 363 DVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMR 422
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
++P + + + AC +LG+L+ G+ +H + + NALI MY +CG +
Sbjct: 423 SENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVK 482
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+A +F M D VSW+ +I L HG +A+ LF M + P+ I+F+ +L+AC
Sbjct: 483 EAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN 542
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H+G +EG YF+SMKRD I +HY L+DLLGRAGR+ +A ++I+ MP +P IW
Sbjct: 543 HSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIW 602
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
++LS CRT ++E+ A + L + P+ G Y+LLSN Y+ G W D +R+RKL+R +
Sbjct: 603 EAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDR 662
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+KK PGCS IE N+V F+ GD P +++ LE++
Sbjct: 663 GVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVG 703
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 173/345 (50%), Gaps = 23/345 (6%)
Query: 49 VTKMIDVCNSGGDLAYASLLFKQVKEP--NVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
T ++ + L A F V + L+NA+I AY A+ +++ +L
Sbjct: 91 ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLA- 149
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLG----KQIHAHVCKFGLKSHSITENALLDLY 162
+GSL PD ++ ++ AG P++ Q+H V K G NAL+ LY
Sbjct: 150 --SGSL-RPDDYSFTALLS--AGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALY 204
Query: 163 GKCDE---LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA 219
KC+ +A KV +EM ++D + W ++ GY R G + AR +F+++ V W A
Sbjct: 205 MKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNA 264
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH---MYCD 276
MISGY H G EA ++FR+M + + DE + SVL ACA +G G+ +H +
Sbjct: 265 MISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQ 324
Query: 277 KNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
N + + + NAL+ Y KCG I A ++FD M +DVVSW+T++ G KA+
Sbjct: 325 PNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAV 384
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
+F EM N+++++ ++S H GF + L F+ M+ ++
Sbjct: 385 EVFEEMPY----KNELSWMVMVSGYVHGGFAEDALKLFNKMRSEN 425
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 172/510 (33%), Positives = 289/510 (56%), Gaps = 4/510 (0%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++ +C L++ K IH ++L ++ +ID+ DL A +F+++
Sbjct: 118 FPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 177
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR-DPRTGSLILPDKFTLPFVIKSCAGLLC 132
+V +N++I Y N + A+ +Y Q ++ + PD T+ ++++C L
Sbjct: 178 LRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGD 237
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
GK +H ++ G + + N L+++Y KC L+ + +VF M +D V+WN++I+
Sbjct: 238 LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINV 297
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y + G+M + +F+ M I++W +I+ H L + +M+ G+ PD ++
Sbjct: 298 YIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATM 357
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+S+LP C+ L + G+ IH K L + N LIEMY KCG + + Q+F M
Sbjct: 358 LSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT 417
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+DVV+W+ +I +G+ KA+ F EM+ + P+ + F+ ++ AC+H+G EGL Y
Sbjct: 418 KDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNY 477
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F MK+D+ IE +IEHY C+VDLL R+ LD+A + I MP+KPD+ IWG+LLS+CR
Sbjct: 478 FHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSG 537
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
+ EIA E ++ L P+DTG YVL+SNIYA G+W+ V +RK I+++ +KK PGCS +
Sbjct: 538 DTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWM 597
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
E+ N+V F +G +++ LL +LA
Sbjct: 598 EIQNKVYVFGTGTKFFEQFEEVNKLLGMLA 627
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 209/456 (45%), Gaps = 70/456 (15%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN-VFL 79
L S +L K+H+ I+ L S K+I D + +F+ N V+L
Sbjct: 23 LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYL 82
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N++IRA T+N L+ A++LY + R + PD +T P VI +CAGLL + K I
Sbjct: 83 WNSIIRALTHNGLFSEALSLYSETQRIR-----LQPDTYTFPSVINACAGLLDFEMAKSI 137
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H V G S NAL+D+Y + ++L +A KVFEEM RD+V+WN+LISGY G
Sbjct: 138 HDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYW 197
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
+A ++ Y I + E ++ F+ PD ++I S+L AC
Sbjct: 198 NEALEIY-----------------YQSIKLFMEMVNQFK--------PDLLTITSILQAC 232
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
LG LE G+++H Y + T N LI MY KCG + + ++F M +D VSW+
Sbjct: 233 GHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWN 292
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++I +GK ++ +F M+ + IT+ ++++C H+ N GL M+ +
Sbjct: 293 SMINVYIQNGKMGDSLKVFENMKARDI----ITWNTIIASCVHSEDCNLGLRMISRMRTE 348
Query: 380 HHI-------------------EHKIEHYGC---------------LVDLLGRAGRLDQA 405
E +GC L+++ + G L +
Sbjct: 349 GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNS 408
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
+ + M K D W +L+S+C Y + AV A
Sbjct: 409 FQVFKLMKTK-DVVTWTALISACGMYGEGKKAVRAF 443
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 301/530 (56%), Gaps = 12/530 (2%)
Query: 17 FVPILQSCENLIELKKIHTQIL-KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
F+ ++++ L E+K+IH I+ LS N+L ++ G+ A +F ++ P
Sbjct: 136 FLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHP 195
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+V +N MI Y A+ LY +M+ D I PD++T+ ++ C L L
Sbjct: 196 DVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG-----IEPDEYTVLSLLVCCGHLSDIRL 250
Query: 136 GKQIHAHVCKFG--LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK +H + + G S+ I NALLD+Y KC E A + F+ M +D+ +WN ++ G+
Sbjct: 251 GKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGF 310
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL-DVFRQMQMV-GIEPDEIS 251
RLG M+ A+ +FD+MP +VSW +++ GY+ G + ++F +M +V ++PD ++
Sbjct: 311 VRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVT 370
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VS++ A G L G W+H + L + +ALI+MY KCG I +A +F
Sbjct: 371 MVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT 430
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E+DV W+++I GLA HG +A+ LF MQ V PN++T + +L+AC+H+G EGL
Sbjct: 431 EKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLH 490
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE-EMPMKPDAKIWGSLLSSCRT 430
F+ MK + + EHYG LVDLL RAGR+++A +I++ +MPM+P +WGS+LS+CR
Sbjct: 491 VFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRG 550
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
++E A +A+ LL LEPE G YVLLSNIYA GRW + R+ + ++ +KKT G S
Sbjct: 551 GEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Query: 491 LIEVNNEVQEFVSGD-DTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539
+ + FV+ + P +I +L+ L D +D++ +I
Sbjct: 611 SVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPKLDCLDLLEIEI 660
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 218/473 (46%), Gaps = 96/473 (20%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSGGDLAYASLLF 69
+L + + +L++C + + K++ QI+++ L F ++++I +L A LLF
Sbjct: 32 QLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLF 91
Query: 70 KQ-VKEPNVFLYNAMIRAYTN--NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
PNVF+YN MI A ++ N +G LY M+R + PD+ T +++K+
Sbjct: 92 LNFTPNPNVFVYNTMISAVSSSKNECFG----LYSSMIRHR-----VSPDRQTFLYLMKA 142
Query: 127 CAGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+ L S KQIH H+ G L + N+L+ Y + A KVF M D+ +
Sbjct: 143 SSFL---SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSS 199
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
+N +I GYA+ G++ EAL ++ +M GI
Sbjct: 200 FNVMIVGYAK--------------------------QGFS-----LEALKLYFKMVSDGI 228
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT--VICNALIEMYIKC------ 297
EPDE +++S+L C L + LG+ +H + ++ + + ++ NAL++MY KC
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 298 -------------------------GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
G + A +FDQM +RD+VSW++++ G + G
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 333 KAIH-LFHEMQRL-KVPPNDITFIGLLSACAHT-----GFWNEGLMYFDSMKRDHHIEHK 385
+ + LF+EM + KV P+ +T + L+S A+ G W GL+ +K D +
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS-- 406
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
L+D+ + G +++A + + K D +W S+++ + N + A+
Sbjct: 407 ----SALIDMYCKCGIIERAFMVFKTATEK-DVALWTSMITGLAFHGNGQQAL 454
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 284/506 (56%), Gaps = 43/506 (8%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+S L L+++H I+ L +S L+TK+I + + G + YA LF V P+ FL
Sbjct: 33 LLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFL 92
Query: 80 YNAMIRAYTNNHLYGLAIN---LYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++++++ + +G +I+ Y++ML S +T VIK+CA L LG
Sbjct: 93 FDSLLKVTSK---FGFSIDTVLFYRRMLFSGAPQS-----NYTFTSVIKACADLSALRLG 144
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K+IH+HV G S + AL+ LY K ++ A KVF+ M R I+AWN+LISGY +
Sbjct: 145 KEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQN 204
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G +P E++ +F M G +PD +IVS+L
Sbjct: 205 G-----------LP--------------------QESIGLFHLMMESGFQPDSATIVSLL 233
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
+C+QLG+L+ G W+H Y D N V+ +LI MY +CG +++A ++FD M ER+VV
Sbjct: 234 SSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVV 293
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+ +I G HG +A+ LF EM+ PN+ITF+ +LSACAH+G ++G F SM
Sbjct: 294 TWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSM 353
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE-MPMKPDAKIWGSLLSSCRTYSNLE 435
K + + +EH C+VD+ GRAG L+ A I++ +P +P +W S+L +CR + N +
Sbjct: 354 KEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFD 413
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ V EH+L +EPE+ G+YV+LSNIYA GR + V +R ++ + +KK G S IE+N
Sbjct: 414 LGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEIN 473
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELL 521
+ F GD + P I+ L+ L
Sbjct: 474 RKTYLFSMGDKSHPQTNTIYRYLDEL 499
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 143/318 (44%), Gaps = 42/318 (13%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++++C +L L K+IH+ ++ ++ +I + D+ A +F +
Sbjct: 128 FTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMP 187
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ + +N++I Y N L +I L+ M+ S PD T+ ++ SC+ L
Sbjct: 188 QRTIIAWNSLISGYDQNGLPQESIGLFHLMME-----SGFQPDSATIVSLLSSCSQLGAL 242
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G +H + G D ++V +LI+ Y
Sbjct: 243 DFGCWLHDYADGNGF-------------------------------DLNVVLGTSLINMY 271
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
R G + KAR +FD M +V+WTAMISGY G +A+++F +M+ G P+ I+ V
Sbjct: 272 TRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFV 331
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA-LIEMYIKCGCINQASQLFDQMVE 312
+VL ACA G ++ G + + + L V N +++M+ + G +N A Q + +
Sbjct: 332 AVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIP 391
Query: 313 RD--VVSWSTVIGGLANH 328
++ W++++G H
Sbjct: 392 KEPGPAVWTSMLGACRMH 409
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 153/369 (41%), Positives = 244/369 (66%), Gaps = 1/369 (0%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
N ++ Y + +++ A ++F+ M D D+++WN ++SGYA G+++ +F++MP +
Sbjct: 60 NVIVSGYIELGDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMPARNVY 119
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLELGEWIHMY 274
SW +I GY G + EAL+ F++M + G+ P++ ++V+VL AC++LG LE+G+W+H+Y
Sbjct: 120 SWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDLEIGKWVHVY 179
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
D + NALI+MY KCG I +A +FD + +D+++W+T+I LA H A A
Sbjct: 180 ADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHXHAADA 239
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVD 394
+ LF M+R P+ +TF+G+LSAC H G G ++F SM D+ I +IEHYGC+VD
Sbjct: 240 LSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDYLIVPQIEHYGCMVD 299
Query: 395 LLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGN 454
LLGRAG ++QA++I+ +MPM+PD IW +LL +CR Y N+E+A +A++ L+ LEP + GN
Sbjct: 300 LLGRAGLINQAVDIVRKMPMEPDVVIWAALLGACRXYKNVEMAELALQRLIELEPNNPGN 359
Query: 455 YVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
+V+LSNIY GR +DV+R++ +R +K PGCS+I N+ V EF S D+ P I
Sbjct: 360 FVMLSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSVVEFYSLDERHPETDSI 419
Query: 515 FWLLELLAL 523
+ L+ L +
Sbjct: 420 YRALQGLTI 428
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 45/288 (15%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F+++ NV+ +N +I Y N L+ A+ +K+ML D +++P+ +T+ V+ +C
Sbjct: 109 VFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVD----GVVVPNDYTVVAVLSAC 164
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+ L +GK +H + G K + NAL+D+Y KC + +A VF+ + +DI+ WN
Sbjct: 165 SRLGDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWN 224
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+I+ A A L +F M+ G P
Sbjct: 225 TIINSLAMHXHAADA-------------------------------LSLFEGMKRAGERP 253
Query: 248 DEISIVSVLPACAQLGSLELGEWIHM--YCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
D ++ V +L AC +G + G ++H D ++ + ++++ + G INQA
Sbjct: 254 DGVTFVGILSACTHMGLVRNG-FLHFQSMVDDYLIVPQIEHYGCMVDLLGRAGLINQAVD 312
Query: 306 LFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFH-EMQRL-KVPPND 350
+ +M +E DVV W+ ++G + +K + + +QRL ++ PN+
Sbjct: 313 IVRKMPMEPDVVIWAALLGAC----RXYKNVEMAELALQRLIELEPNN 356
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 287/492 (58%), Gaps = 5/492 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
KK+H I+K + Q L +I++ G + A LF Q+ + + +++ A
Sbjct: 23 KKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQA 82
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+L L ++++ M + + PD + ++K+CA L GKQ+HA +
Sbjct: 83 NLPHLTLSMFPAMFKQDG----LQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSD 138
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+ +++L+D+Y KC VF+ ++ ++ ++W +ISGYA+ G+ A LF KMP
Sbjct: 139 DDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMP 198
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLELGE 269
++SWTA+ISG G++ ++ +F +M+ GI+ D + S++ A A L L LG+
Sbjct: 199 VKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGK 258
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
IH + NAL++MY KC + A ++F +MV+RD+VSW+++I G A HG
Sbjct: 259 QIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHG 318
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
A +A+ L++ M + PN++TF+GL+ AC+H G ++G +F+SM +D+ I ++HY
Sbjct: 319 LAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHY 378
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
CL+DLL R+G L++A N+I+ MP KPD W +LLS+C + N I + +HLL L+P
Sbjct: 379 TCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKP 438
Query: 450 EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
ED Y+LLSNIYA WE VS++R+L+ + +KK PG S I + E Q F++G+ + P
Sbjct: 439 EDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHP 498
Query: 510 FLKDIFWLLELL 521
++IF LLE L
Sbjct: 499 AKEEIFGLLEEL 510
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 126/258 (48%), Gaps = 34/258 (13%)
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L + +++CA P +GK++H H+ K G+ N L+++YGKC + +A +F ++
Sbjct: 6 LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
RD ++W ++++ + +P+ T+ + AM F+Q
Sbjct: 66 HRDPISWASILTANNQ-----------ANLPHLTLSMFPAM----------------FKQ 98
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
G++PD ++ ACA LG+++ G+ +H + + V+ ++L++MY KCG
Sbjct: 99 ---DGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGL 155
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ +FD + ++ +SW+ +I G A G+ AI LF +M N +++ L+S
Sbjct: 156 PDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPV----KNLLSWTALISG 211
Query: 360 CAHTGFWNEGLMYFDSMK 377
+G W + F M+
Sbjct: 212 LVQSGNWVDSFYLFMEMR 229
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 292/523 (55%), Gaps = 38/523 (7%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIR----- 85
KK+H+ ++K L + ++++ GDL A ++F ++K N +NAMI
Sbjct: 127 KKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNC 186
Query: 86 -------------------------AYTNNHLY-GLAINLYKQMLRDPRTGSLILPDKFT 119
A N H + A+ + +L+D + + PD+F+
Sbjct: 187 GRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKD----TSLKPDRFS 242
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE-- 177
L + +CA L S GKQIH ++ + + NAL+ +Y K + A ++ E+
Sbjct: 243 LASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSG 302
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
++D D++A+ L++GY +LG + AR +F+ + +V+WTAMI GY G +A++VF
Sbjct: 303 ISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVF 362
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
+ M G P+ ++ ++L A + + SL G+ IH ++ + NAL MY K
Sbjct: 363 KTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKA 422
Query: 298 GCINQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
G IN A ++F+ + + RD VSW+++I LA HG +AI LF +M L + P+ IT++G+
Sbjct: 423 GSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGV 482
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
LSAC H G +G YFD MK H I+ + HY C+VDL GRAG L +A +E MPM+P
Sbjct: 483 LSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEP 542
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
D WGSLLSSC+ Y N+++A +A E LL++EP ++G Y L+N+Y+ G+W+D +++RK
Sbjct: 543 DVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRK 602
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
L++++ +KK G S +++ N+ F D P +I+ +++
Sbjct: 603 LMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMD 645
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 187/423 (44%), Gaps = 42/423 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L A +F + + + +I Y + AI ++ M++D +LP +FT
Sbjct: 55 GKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDK-----VLPTQFT 109
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L V+ SCA +GK++H+ V K GL + N+LL++Y K +L A VF+ M
Sbjct: 110 LTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMK 169
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
R+ +WN +IS + G++ A F+ + IVSW +MI+G G EAL F
Sbjct: 170 LRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSS 229
Query: 240 -MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM----- 293
++ ++PD S+ S L ACA L L G+ IH Y + + NALI M
Sbjct: 230 ILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSG 289
Query: 294 ----------------------------YIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
Y+K G I A Q+F+ + + DVV+W+ +I G
Sbjct: 290 GVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGY 349
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEH 384
+G + AI +F M PN T +LSA + N G ++ +++ +
Sbjct: 350 VQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSP 409
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ + L + +AG ++ A + + D W S++ + + E A+ E +
Sbjct: 410 SVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQM 467
Query: 445 LVL 447
L L
Sbjct: 468 LTL 470
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 130/241 (53%), Gaps = 4/241 (1%)
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
+ K GL N L++LY K ++AH +F EM + +WN ++SGYA+ G+++KA
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
+FD +P VSWT +I GY +G + +A+ +F M + P + ++ +VL +CA
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
GS +G+ +H + K L + N+L+ MY K G + A +FD+M R+ SW+ +I
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
N G+ A+ F + + +++ +++ C GF NE L +F S+ +D +
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDI----VSWNSMIAGCNQHGFDNEALQFFSSILKDTSL 236
Query: 383 E 383
+
Sbjct: 237 K 237
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 176/485 (36%), Positives = 266/485 (54%), Gaps = 36/485 (7%)
Query: 49 VTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPR 108
T ++D+ G L A LF + + V + AMI ++ L+ +M +
Sbjct: 235 TTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEEN- 293
Query: 109 TGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL 168
I P++ T+ +I C LGKQ+HA++ + G AL+D+YGKC ++
Sbjct: 294 ----IFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDI 349
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
+ AR LFD ++ WTAM+S Y
Sbjct: 350 -------------------------------RNARALFDSTQNRDVMIWTAMLSAYAQAN 378
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
+A ++F QM+ G+ P +++IVS+L CA G+L+LG+W+H Y DK + ++
Sbjct: 379 CIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNT 438
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY KCG IN A +LF + + RD+ W+ +I G A HG +A+ +F EM+R V P
Sbjct: 439 ALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKP 498
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
NDITFIGLL AC+H G EG F+ M + +IEHYGC+VDLLGRAG LD+A +
Sbjct: 499 NDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEM 558
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I+ MP+KP+ +WG+L+++CR + N ++ +A LL +EPE+ G VL+SNIYA RW
Sbjct: 559 IKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRW 618
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
D + +RK +++ MKK PG S+IEVN V EF+ GD + P ++ I +L + + A
Sbjct: 619 SDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEA 678
Query: 529 KDVID 533
V D
Sbjct: 679 GYVPD 683
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 184/399 (46%), Gaps = 40/399 (10%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
K+IH +LK L + F+ ++ + + YA L+F ++ E +V ++ MIR+ + N
Sbjct: 114 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRN 173
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ +A+ L ++M + P + + ++ A +GK +HA+V +
Sbjct: 174 KEFDMALELIREM-----NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNE 228
Query: 151 H--SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
H T ALLD+Y KC L A ++F +T + +V+W +I+G R +++
Sbjct: 229 HMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLE-------- 280
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
E +F +MQ I P+EI+++S++ C G+L+LG
Sbjct: 281 -----------------------EGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLG 317
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+ +H Y +N + AL++MY KC I A LFD RDV+ W+ ++ A
Sbjct: 318 KQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQA 377
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
+A +LF +M+ V P +T + LLS CA G + G + S +E
Sbjct: 378 NCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG-KWVHSYIDKERVEVDCIL 436
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
LVD+ + G ++ A + E + D +W ++++
Sbjct: 437 NTALVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITG 474
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 151/332 (45%), Gaps = 40/332 (12%)
Query: 101 KQMLRDPRTGSLILPD-KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALL 159
KQ L+ R G F P V+K+C + LGK+IH V K GL
Sbjct: 77 KQSLKANRNGDDDDDVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGL----------- 125
Query: 160 DLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA 219
DRD+ N L+ Y ++ AR++FDKM +VSW+
Sbjct: 126 --------------------DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWST 165
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN- 278
MI + + AL++ R+M + + P E+++VS++ A ++ +G+ +H Y +N
Sbjct: 166 MIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS 225
Query: 279 ---HLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
H+ T AL++MY KCG + A QLF+ + ++ VVSW+ +I G + +
Sbjct: 226 NNEHMGVPTT--TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGT 283
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
LF MQ + PN+IT + L+ C TG G + R+ + LVD+
Sbjct: 284 KLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRN-GFSVSLALATALVDM 342
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
G+ + A + + + D IW ++LS+
Sbjct: 343 YGKCSDIRNARALFDSTQNR-DVMIWTAMLSA 373
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 164/356 (46%), Gaps = 53/356 (14%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
K++H IL+ S S L T ++D+ D+ A LF + +V ++ AM+ AY
Sbjct: 318 KQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQA 377
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ A NL+ QM RT S + P K T+ ++ CA LGK +H+++ K ++
Sbjct: 378 NCIDQAFNLFDQM----RT-SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV 432
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
I AL+D+Y KC ++ A ++F E RDI WN +I+G+A
Sbjct: 433 DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFA---------------- 476
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-- 268
+ GY EALD+F +M+ G++P++I+ + +L AC+ G + G
Sbjct: 477 ----------MHGYGE-----EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKK 521
Query: 269 ---EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGG 324
+ +H + L+ + ++++ + G +++A ++ M ++ + + W G
Sbjct: 522 LFEKMVHTF----GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVW----GA 573
Query: 325 LANHGKAHKAIHL--FHEMQRLKVPPNDITFIGLLSAC-AHTGFWNEGLMYFDSMK 377
L + HK L Q L++ P + + L+S A W++ +MK
Sbjct: 574 LVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMK 629
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL AC Q+ +LG+ IH + K L R + NAL+ MY +C C+ A +FD+M+ER
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DVVSWST+I L+ + + A+ L EM ++V P+++ + +++ A T G
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 374 DSMKRDHHIEH-KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
+ R+ + EH + L+D+ + G L A + + K W ++++ C +
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS-WTAMIAGCIRSN 277
Query: 433 NLE 435
LE
Sbjct: 278 RLE 280
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 183/502 (36%), Positives = 286/502 (56%), Gaps = 42/502 (8%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQVKEPNVFLYN 81
C ++ + K+ H +L+ L + +K+I + GDL YA LF Q++ P+ F+ N
Sbjct: 21 CTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICN 80
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
MIR Y + A++LY M+ + D +T PFV+ +CA L LG++ H
Sbjct: 81 TMIRGYARSQNPYEAVSLYYFMVERG-----VPVDNYTYPFVLAACARLGAVKLGRRFHC 135
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
V K G S NAL+ Y C A VF+E T RD
Sbjct: 136 EVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRD------------------- 176
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIVSVLPACA 260
+V+W MI+ + + G +A D+ +M ++ + PDE+++VS++PACA
Sbjct: 177 ------------VVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACA 224
Query: 261 QLGSLELGEWIHMYC---DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
QLG+LE G+++H Y DK + V+ AL++MY KCG I+ A Q+F +M R+V +
Sbjct: 225 QLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFT 284
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +IGGLA HG AI LF +M+ K+ P+D+TFI LL AC+H G +EGL F +MK
Sbjct: 285 WNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMK 344
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
IE ++EHYGC+VDLL RA ++D AL IE MP+K ++ +W +LL +CR+ + ++A
Sbjct: 345 NKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLA 404
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
++ LEP+ G YV+LSN+YA +W+ ++RK +++K ++KTPGCS IE+N
Sbjct: 405 EKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGM 464
Query: 498 VQEFVSGDDTKPFLKDIFWLLE 519
+ +FV+GD + + I+ ++E
Sbjct: 465 IHQFVAGDRSHLQTEQIYAMIE 486
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 265/429 (61%), Gaps = 9/429 (2%)
Query: 114 LPDKFTLPFVIKSCAGLLCPSLGKQ----IHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+P+ TL V+ +CA L ++ +HA V K SH + L+ Y
Sbjct: 64 VPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPH 122
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
A ++F+ M R V +N +ISG R G + A +FD MP VSWTA+I G G
Sbjct: 123 LALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 182
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EA++ FR M + G+EPD +++++V+ ACA++G+L LG W+H + L R I N+
Sbjct: 183 HDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANS 242
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI+MY +CG + A Q+F M +R VVSW+++I G A +G+ A+ F M+R P+
Sbjct: 243 LIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPD 302
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G+L+AC+H G +EGL Y+D M+ ++ I ++EHYGC+VDLLGR+GRL++A+ ++
Sbjct: 303 AVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEAMRVV 362
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
MPM+P+ + G+LL+ CR + ++ +A M+HLL L+P NYVLLSNIYA G+W+
Sbjct: 363 TTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWD 422
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAK 529
++R L++++ ++K PG S +E++ +V EFVSGD + P ++I +L LL +H+
Sbjct: 423 GAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLL-MHEMAGH 481
Query: 530 D---VIDIM 535
D VID +
Sbjct: 482 DYDHVIDCL 490
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 296/517 (57%), Gaps = 9/517 (1%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L +C + +LK +H +IL+ S +ID+ G L A +FK ++
Sbjct: 281 YGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLR 340
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E + +N++I + L A+ L+ QM R S ++ D+F LP ++ C+G
Sbjct: 341 EHDHISWNSLITGVVHFGLGEDALILFNQMRR-----SSVVLDEFILPTILGVCSGPDYA 395
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S G+ +H + K G+ S + NA++ +Y KC + +A VF M R+ ++W +I+ +
Sbjct: 396 STGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAF 455
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+R G + KAR FD MP IV+W +M+S Y G E L ++ M+ G++PD I+
Sbjct: 456 SRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFT 515
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+ + ACA L ++LG + + K L + N+++ MY +CG I +A FD + ++
Sbjct: 516 TSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDK 575
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D++SW+ ++ A +G K I F +M + + PN I+++ +LS C+H G EG YF
Sbjct: 576 DLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYF 635
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
DSM R I EH+ C+VDLLGRAG L+QA ++IE MP KP+A +W +LL SCR + +
Sbjct: 636 DSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHD 695
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L +A A + L+ L+ E + YVLLSN+Y++ G ++V+ MRKL++ K ++ + GCS IE
Sbjct: 696 LRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIE 755
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLL-ELLALHQDRAK 529
V+N V F + + P +K+++ L E++ + +D K
Sbjct: 756 VDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGK 792
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 195/395 (49%), Gaps = 7/395 (1%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ--VKEPNVFLYNAMIRAYTNNHLY 93
Q+ + ++ F MI S ++ A LF + V+ + + MI Y+ N +
Sbjct: 64 QVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFH 123
Query: 94 GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI 153
+ + M+RD G D F+ V+K+C L L Q+HA V K G +
Sbjct: 124 SRSFETFSLMIRDTNDGGKNY-DPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETC 182
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
+N+++ +Y KC ++ A VF ++ + WN++I GY+++ KA +F++MP
Sbjct: 183 IQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERD 242
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
VSW +IS ++ G + L +F +M G P+ ++ SVL ACA L+ G +H
Sbjct: 243 EVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHA 302
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
+ V N LI+MY KCGC++ A ++F + E D +SW+++I G+ + G
Sbjct: 303 RILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGED 362
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCL 392
A+ LF++M+R V ++ +L C+ + + G L++ ++K + + +
Sbjct: 363 ALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGN--AI 420
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+ + + G D+A + MP++ + W +++++
Sbjct: 421 ITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITA 454
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 155/349 (44%), Gaps = 39/349 (11%)
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
P + +++HA + GL S N LL +Y C +A +VF+E R+I WN +I
Sbjct: 24 PHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRA 83
Query: 193 YARLGQMKKARMLFDKMPYTT--IVSWTAMISGYTHIGSYAEALDVF----RQMQMVGIE 246
+M A LFD+MP VSWT MISGY+ G ++ + + F R G
Sbjct: 84 LVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKN 143
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG-------- 298
D S SV+ AC LG L +H K T I N+++ MY+KCG
Sbjct: 144 YDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETV 203
Query: 299 ----------CIN-------------QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
C N +A Q+F++M ERD VSW+T+I + HG + +
Sbjct: 204 FFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCL 263
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
+F EM PN +T+ +LSACA T G + R H + G L+D+
Sbjct: 264 AMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNG-LIDM 322
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ G LD A + + + + D W SL++ + E A+I +
Sbjct: 323 YAKCGCLDLAKRVFKSLR-EHDHISWNSLITGVVHFGLGEDALILFNQM 370
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 168/392 (42%), Gaps = 64/392 (16%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++++C +L + + ++H + K + ++ + GD+ A +F ++
Sbjct: 149 FTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIE 208
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLIL------------------ 114
P++F +N+MI Y+ + A+ ++ +M RD + + ++
Sbjct: 209 RPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVE 268
Query: 115 -------PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
P+ T V+ +CA G +HA + + + N L+D+Y KC
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGC 328
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
L A +VF+ + + D ++WN+LI+G G + A +LF++M +++V
Sbjct: 329 LDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVV------------ 376
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
DE + ++L C+ GE +H Y K+ + +
Sbjct: 377 -------------------LDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVG 417
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
NA+I MY KCG ++A +F M R+ +SW+ +I + G KA F M
Sbjct: 418 NAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPE---- 473
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
N +T+ +LS GF EGL + SM+ +
Sbjct: 474 RNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSN 505
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/429 (39%), Positives = 264/429 (61%), Gaps = 9/429 (2%)
Query: 114 LPDKFTLPFVIKSCA----GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+P+ TL V+ +CA L L +HA V K SH + L+ Y
Sbjct: 9 VPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPH 67
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
A ++F+ M R V +N +ISG R G + A +FD MP VSWTA+I G G
Sbjct: 68 LALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 127
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EA+D FR M + G+EPD +++++V+ ACA++G+L LG W+H + L R I N+
Sbjct: 128 HDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANS 187
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI+MY +CG + A Q+F M +R VVSW+++I G A +G+ A+ F M+R P+
Sbjct: 188 LIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPD 247
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G+L+AC+H G +EGL Y+D M+ ++ I ++EHYGC+VDLLGR+G+L++A+ ++
Sbjct: 248 AVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVV 307
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
MPM+P+ + G+LL+ CR + ++ +A M+HLL L+P NYVLLSNIYA G+W+
Sbjct: 308 TTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWD 367
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAK 529
++R L++++ ++K PG S +E++ +V EFVSGD + P ++I +L LL +H+
Sbjct: 368 GAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLL-MHEMAGH 426
Query: 530 D---VIDIM 535
D VID +
Sbjct: 427 DYDHVIDCL 435
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ ++ +C + L +H +++ L ++ + +ID+ G + A +F ++
Sbjct: 150 LIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFSGMR 209
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA-GLLC 132
+ V +N+MI + N A+ ++ M R+ PD T V+ +C+ G L
Sbjct: 210 KRTVVSWNSMIVGFAANGRCADAVEHFEAMRREG-----FKPDAVTFTGVLTACSHGGLT 264
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNNLIS 191
+ ++G+ + ++DL G+ +L EA +V M R + V L++
Sbjct: 265 DEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALLA 324
Query: 192 GYARLGQMKKARMLFDKM 209
G G + A L +
Sbjct: 325 GCRMHGDVGMAEQLMQHL 342
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 291/537 (54%), Gaps = 10/537 (1%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA 63
++GA ++ + + + + C+ + + ++L + + T ++ GD+
Sbjct: 189 KLGAGAVLSVSNALIALYMKCDA-PGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVH 247
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
A F+++ ++NAMI Y + + A L+++M+ I PD+FT +
Sbjct: 248 AARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMV-----SKRIPPDEFTFTSL 302
Query: 124 IKSCAGLLCPSLGKQIHAHVCK----FGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ +CA GK +H + F ++ NAL+ LY K ++ A K+F+ MT
Sbjct: 303 LSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMT 362
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+D+V+WN ++SGY G + A +F +MPY + +SW M+SGY H G +AL +F Q
Sbjct: 363 LKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQ 422
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ ++P + + + AC +LG+L+ G+ +H + + NAL+ MY +CG
Sbjct: 423 MRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGA 482
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ A +F M D VSW+ +I L HG +A+ LF +M + P+ I+F+ +L+A
Sbjct: 483 VKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTA 542
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C H G ++G YF+SM+RD I +HY L+DLLGRAGR+ +A ++I+ MP +P
Sbjct: 543 CNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPA 602
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IW ++LS CR ++E+ A + L + PE G Y+LLSN Y+ GRW D +R+RKL+R
Sbjct: 603 IWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMR 662
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
+ +KK PGCS IEV N+V F+ GD P +++ LE++ + V D +
Sbjct: 663 DRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKF 719
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 18/342 (5%)
Query: 49 VTKMIDVCNSGGDLAYASLLFKQVK--EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
T ++ G L ++ F V + L+NAMI A+ L A+++++ +L
Sbjct: 92 ATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLAS 151
Query: 107 PRTGSLILPDKFTLPFVIKSCAGL--LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK 164
+ + PD ++ ++ + + L S Q+H V K G + NAL+ LY K
Sbjct: 152 DDS---LRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMK 208
Query: 165 CDE---LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
CD +A KV +EM ++D + W ++ G+ R G + AR F+++ V W AMI
Sbjct: 209 CDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMI 268
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH---MYCDKN 278
SGY G AEA ++FR+M I PDE + S+L ACA G G+ +H + +
Sbjct: 269 SGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPD 328
Query: 279 HLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + + NAL+ +Y K G I A+++FD M +DVVSW+T++ G G A +
Sbjct: 329 FVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARI 388
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
F EM ++++++ ++S H G + L F+ M+ +
Sbjct: 389 FKEMPY----KSELSWMVMVSGYVHGGLAEDALKLFNQMRSE 426
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 164/378 (43%), Gaps = 49/378 (12%)
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
SH LL LY +L +F D VA +L+S YA G+++ + FD +
Sbjct: 58 SHPHLTLRLLHLYTLSPDLATPAVLFR--ADPGPVAATSLVSAYAVAGRLRDSAAFFDSV 115
Query: 210 PYTT--IVSWTAMISGYTHIGSYAEALDVFRQMQMV--GIEPDEISIVSVLPACAQLGSL 265
P V AMIS + A A+ VFR + + PD+ S S+L A Q+ L
Sbjct: 116 PVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDL 175
Query: 266 ELGEWIHMYCDKNHLLRRTV--ICNALIEMYIKC---GCINQASQLFDQMVERDVVSWST 320
+ ++C + L V + NALI +Y+KC G A ++ D+M E+D ++W+T
Sbjct: 176 AVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTT 235
Query: 321 VIGGLANHGKAH-------------------------------KAIHLFHEMQRLKVPPN 349
++ G G H +A LF M ++PP+
Sbjct: 236 IVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPD 295
Query: 350 DITFIGLLSACAHTGFWNEGLMY---FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
+ TF LLSACA+ GF+ G F ++ D E + LV L ++G++ A
Sbjct: 296 EFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVAT 355
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
I + M +K D W ++LS L+ A + + + +++++ + Y G
Sbjct: 356 KIFDSMTLK-DVVSWNTILSGYIESGCLDNAARIFKEMPY---KSELSWMVMVSGYVHGG 411
Query: 467 RWEDVSRMRKLIRSKSMK 484
ED ++ +RS+ +K
Sbjct: 412 LAEDALKLFNQMRSEDVK 429
>gi|414873430|tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/502 (37%), Positives = 290/502 (57%), Gaps = 20/502 (3%)
Query: 32 KIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+IH + K LL L T ++ + G +A LF ++ +P + AM RA+ +
Sbjct: 32 EIHGLLFKEGLLHAGAHLPTALLSAYAALGRPRHARDLFDEMPDPGLVSRTAMARAHAAS 91
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--------AGLLCPSL-GKQIHA 141
A+ +++ M+ D +LPD L + +C AG+ GK +HA
Sbjct: 92 GQAAQALAVFRDMIADG-----VLPDNVALAVALAACHTTASLPAAGMAAARRPGKMVHA 146
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
+ G+ L+ +YG+ EL + ++F+ M R V+WN ++ Y R +
Sbjct: 147 IIVTSGIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRSTVSWNAMVHQYIRHSNVGD 206
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM---QMVGIEPDEISIVSVLPA 258
A LF MP +VSW MI+GY+ +G + EAL++ RQM + P+ ++ +VL A
Sbjct: 207 AYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCPVYPNGPTMSTVLAA 266
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE-RDVVS 317
CA G LE G W+H + D+N + + +LI+MY+KCG I +A Q+F++ E RD+ S
Sbjct: 267 CAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVFEKAPEARDLYS 326
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+T+I GLA HG+A A+ +F MQ + P+D+T +G+L+ACAH G +EGL +F S++
Sbjct: 327 WTTMICGLAMHGRAADALKMFGMMQDNGIHPDDVTLVGVLNACAHCGLVDEGLRHFYSLE 386
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ + I KIEHYGC++DLLGR GRL +A NII M MKP+A IWG+ L++C+ +SN+E+
Sbjct: 387 K-YAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNAVIWGAFLNACKVHSNVELG 445
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
IA L L+P D V+LS++YAK W ++R R+ + + +KKTPGCS IE++ E
Sbjct: 446 EIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERREMNNLQIKKTPGCSSIELDGE 505
Query: 498 VQEFVSGDDTKPFLKDIFWLLE 519
V EFV+G P +I +LE
Sbjct: 506 VHEFVAGGFQHPQHGEICTVLE 527
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/460 (38%), Positives = 267/460 (58%), Gaps = 14/460 (3%)
Query: 42 LSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYK 101
+S++ T MI G+L A + F ++ E +V +NAM+ Y I L+
Sbjct: 196 ISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFN 255
Query: 102 QMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC-KFGLKSHSITENALLD 160
ML + PD+ T VI SC+ L P L + I + G + + + ALLD
Sbjct: 256 DMLSPGN----VQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLD 311
Query: 161 LYGKCDELIEAHKVFEEM---TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
++ KC L AHK+FE++ R V WN +IS YAR+G + AR LFDKMP VSW
Sbjct: 312 MHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSW 371
Query: 218 TAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
+MI+GYT G +A+ +F +M +PDE+++VSV AC LG L LG W
Sbjct: 372 NSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILK 431
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
+NH+ + N+LI MY +CG + A +F +M RD+VS++T+I G A HG ++I
Sbjct: 432 ENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIE 491
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
L +M+ + P+ IT+I +L+AC+H G EG F+S+K ++HY C++D+L
Sbjct: 492 LLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIKFP-----DVDHYACMIDML 546
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
GRAGRL++A+ +I+ MPM+P A I+GSLL++ + +E+ +A L +EP ++GNYV
Sbjct: 547 GRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYV 606
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
LLSNIYA GRW+D ++R +R + +KKT G S +E N+
Sbjct: 607 LLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLEHNS 646
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 211/470 (44%), Gaps = 84/470 (17%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG-GDLAYASLLFKQVKEPNVF 78
I+ NL L+++H Q++ + L N V ++ C +Y +F P+V
Sbjct: 9 IVSKITNLHRLRQLHAQLVHHSLHHQNHWVVLLLTQCTRLLAPSSYTCHIFHAATHPDVR 68
Query: 79 LYNAMIRAYTNNHLYG-LAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++ M++ Y+ + + ++L+K MLR I P+ ++KS S
Sbjct: 69 VFTFMLKYYSQIGVRAQVPVSLFKHMLRHCN----IKPNTSFYSVMMKSAG-----SESM 119
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY---- 193
AHV K G N +L +Y K + A K+F+EM DR + WN +ISGY
Sbjct: 120 LFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCG 179
Query: 194 -------------------------------ARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
A+ G +K ARM FDKMP ++VSW AM+S
Sbjct: 180 NEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLS 239
Query: 223 GYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSLELGEWI---------- 271
GY G+ E + +F M G ++PDE + V+V+ +C+ LG L E I
Sbjct: 240 GYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGF 299
Query: 272 -------------HMYC---DKNHLL---------RRTVICNALIEMYIKCGCINQASQL 306
H C + H + R +V NA+I Y + G + A L
Sbjct: 300 RPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHL 359
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGF 365
FD+M +RD VSW+++I G +G++ KAI LF EM P+++T + + SAC H G
Sbjct: 360 FDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGE 419
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
G + S+ +++HI+ I Y L+ + R G + A+ I +EM +
Sbjct: 420 LGLG-NWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATR 468
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 16/232 (6%)
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEA-LDVFRQM-QMVGIEPDEISIVSVLPACAQL 262
+F + + +T M+ Y+ IG A+ + +F+ M + I+P+ ++ +
Sbjct: 58 IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSE 117
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
L L + D++H +R N ++ +Y K G I A +LFD+M +R V W+ +I
Sbjct: 118 SMLFLAHVLKSGYDRDHYVR-----NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 172
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
G G +A LFH M ++ N IT+ +++ A G MYFD M
Sbjct: 173 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMP----- 227
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEM----PMKPDAKIWGSLLSSCRT 430
E + + ++ + G ++ + + +M ++PD W +++SSC +
Sbjct: 228 ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSS 279
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 268/453 (59%), Gaps = 7/453 (1%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G + A LF+ + + + +NA+I Y N L A+ + +ML + S + PD+FT
Sbjct: 242 GRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRML----SYSTMAPDEFT 297
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE-- 177
+ V+ +CA L S+GKQ+HA++ + + NAL+ +Y K + A V ++
Sbjct: 298 ITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAV 357
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M D +++++ L+ GY +LG MK AR +FD M +V+WTAMI GY G EA+++F
Sbjct: 358 MADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELF 417
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
R M G EP+ ++ +VL CA L LE G+ IH ++ + + + N+++ MY +
Sbjct: 418 RLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARS 477
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
G + A ++FD++ ++ V+W+++I LA HG A+ LF EM R+ V P+ ITF+G+
Sbjct: 478 GSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGV 537
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
LSAC H GF +EG YF ++ H I ++ HY C+VDLL RAG +A I++MP++P
Sbjct: 538 LSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEP 597
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
DA WGSLLS+CR + N ++A +A E LL ++P ++G Y LSN+Y+ GRW D +++ K
Sbjct: 598 DAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWK 657
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
+ KS+KK G S + N V F + D P
Sbjct: 658 RRKDKSVKKETGFSWTHIGNRVHVFGADDVLHP 690
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 48/351 (13%)
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
PRT D +++ C P G+ IHA K GL + + N LL Y
Sbjct: 13 PRTAMAAASDSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPA 72
Query: 167 ELI-----EAHKVFEEM--TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA 219
EA ++F+E+ R++ WN+L+S YA+ G++ AR +F +MP VSWT
Sbjct: 73 AGGGGGFREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTV 132
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
M+ G +G + EA+ +F M G+ P + ++ +VL +CA + +G +H + K
Sbjct: 133 MVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLG 192
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV------------------------ 315
L + N+++ MY KCG A +F++M ER V
Sbjct: 193 LSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFE 252
Query: 316 -------VSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWN 367
VSW+ VI G +G KA+ F M + P++ T +LSACA N
Sbjct: 253 NMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACA-----N 307
Query: 368 EGLMYFDSMKRDHHIEHKIEHYG----CLVDLLGRAGRLDQALNIIEEMPM 414
G++ + + ++ + G L+ + ++G ++ A ++++ M
Sbjct: 308 LGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVM 358
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/473 (36%), Positives = 258/473 (54%), Gaps = 63/473 (13%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI--- 169
+LP K + +++SCA LG+ H + K G + I + LLD Y K +L
Sbjct: 6 VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65
Query: 170 ----------------------------EAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
EA +F+ MT+R+ +WN++I+ Y +LG +
Sbjct: 66 RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINS 125
Query: 202 ARMLFDKMPYTTIVSWTA--------------------------------MISGYTHIGS 229
AR++FD P +VSW A MIS Y G
Sbjct: 126 ARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGE 185
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ A+ +F+QMQ ++P E+++VS+L ACA LG+L++GEWIH Y L V+ NA
Sbjct: 186 FGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA 245
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI+MY KCG + A +F + +++ W+++I GL +G+ +AI F M++ + P+
Sbjct: 246 LIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 305
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF+G+LS C+H+G + G YF M + +E +EHYGC+VDLLGRAG L +AL +I
Sbjct: 306 GVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELI 365
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
MPMKP++ + GSLL +C+ + + ++ + LL L+P D GNYV LSN+YA RW+
Sbjct: 366 RAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWD 425
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
DV+ RKL+ + + KTPGCS IEVNN V EFV+GD + P I L+ +A
Sbjct: 426 DVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIA 478
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 56 CNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP 115
C S +A L N +N MI AY +G AI++++QM + + P
Sbjct: 149 CKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSEN-----VKP 203
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
+ T+ ++ +CA L +G+ IH ++ LK + NAL+D+Y KC L A VF
Sbjct: 204 TEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVF 263
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYA 231
++ ++I WN++I G G+ ++A F M I V++ ++SG +H G +
Sbjct: 264 HGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLS 323
Query: 232 EALDVFRQMQMV-GIEP 247
F +M V G+EP
Sbjct: 324 AGQRYFSEMLGVYGLEP 340
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 299/541 (55%), Gaps = 46/541 (8%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYA 65
LS K E V +L+ C N+ E K+ H +ILK L +F + ++ C + G + YA
Sbjct: 25 LSFKLGEKECVSLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYA 84
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F+Q+ E F +N M+R + + A+ YK+M + PD FT P ++K
Sbjct: 85 CSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERG-----VKPDNFTYPTLLK 139
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA L G Q+HAH+ K GL++ D+
Sbjct: 140 ACARLPAVEEGMQVHAHILKLGLEN-------------------------------DVFV 168
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
N+LIS Y + G++ +F++M ++ SW+A+I+ + +G +++ L + M G
Sbjct: 169 QNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGY 228
Query: 246 EPDEISI-VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
E SI VSVL AC LG+L+LG +H + +N ++ +LIEMY+KCG + +
Sbjct: 229 WRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGM 288
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
LF +M +++ +S+S +I GLA HG + + +F EM + P+DI ++G+L+AC+H G
Sbjct: 289 CLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAG 348
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
EGL F+ MK +H IE I+HYGC+VDL+GRAG++D+AL +I+ MPM+P+ +W SL
Sbjct: 349 LVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSL 408
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LS+ + ++NL+ IA + L L+ + +YV+LSN+YA+ RWEDV++ R + SK +
Sbjct: 409 LSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLS 468
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF-------WLLELLALHQDRAKDVIDIMYE 537
+ PG SL+EV ++ FVS D P + ++ W L+ D + + D+ E
Sbjct: 469 QRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQVLCDVDEE 528
Query: 538 D 538
+
Sbjct: 529 E 529
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 265/429 (61%), Gaps = 9/429 (2%)
Query: 114 LPDKFTLPFVIKSCAGLLCPSLGKQ----IHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+P+ TL V+ +CA L ++ +HA V K SH + L+ Y
Sbjct: 98 VPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPH 156
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
A ++F+ M R V +N +ISG R G + A +FD MP VSWTA+I G G
Sbjct: 157 LALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 216
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EA+D FR M + G+EPD +++++V+ ACA++G+L LG W+H + L R I N+
Sbjct: 217 HDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANS 276
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI+MY +CG + A Q+F M +R VVSW+++I G A +G+ A+ F M+R P+
Sbjct: 277 LIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPD 336
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF G+L+AC+H G +EGL Y+D M+ ++ I ++EHYGC+VDLLGR+G+L++A+ ++
Sbjct: 337 AVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVV 396
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
MPM+P+ + G+LL+ CR + ++ +A M+HLL L+P NYVLLSNIYA G+W+
Sbjct: 397 TTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWD 456
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAK 529
++R L++++ ++K PG S +E++ +V EFVSGD + P ++I +L LL +H+
Sbjct: 457 GAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDRSHPQAEEISQMLGLL-MHEMAGH 515
Query: 530 D---VIDIM 535
D VID +
Sbjct: 516 DYDHVIDCL 524
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H +++ L ++ + +ID+ G + A +F +++ V +N+MI + N
Sbjct: 258 VHRLVVRQGLERNVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGR 317
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA-GLLCPSLGKQIHAHVCKFGLKSH 151
A+ ++ M R+ PD T V+ +C+ G L + ++G+ +
Sbjct: 318 CADAVEHFEAMRREG-----FKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAAR 372
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNNLISGYARLGQMKKARMLFDKM 209
++DL G+ +L EA +V M R + V L++G G + A L +
Sbjct: 373 MEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHL 431
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/468 (37%), Positives = 273/468 (58%), Gaps = 6/468 (1%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+ A LF ++ E +V +N ++ AY + AI LY RD R + + F+
Sbjct: 143 GDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLY----RDFRRLDMGF-NAFS 197
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
V+ C L L KQ+H V G S+ + ++++D Y KC E+ A +F+EM
Sbjct: 198 FAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEML 257
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+DI AW ++SGYA+ G M A LF +MP VSW+A+ISGY EALD F +
Sbjct: 258 VKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTK 317
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M GI P++ + S L ACA + +L+ G+ +H Y + + T++ ++LI+MY KCG
Sbjct: 318 MMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGM 377
Query: 300 INQASQLFDQMVER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ + +F M + DVV W+T+I LA +G KA+ +F++M + P+ ITFI +LS
Sbjct: 378 LEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILS 437
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H+G EGL +F +M DH + EHY CL+DLLGRAG + +N +E M KPD
Sbjct: 438 ACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDD 497
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
++W +LL CR ++N+E+ E ++ L+P+ + YV L+++YA G+WE V ++R+L+
Sbjct: 498 RVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELM 557
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQD 526
K ++K G S I+V N+ F++ D P ++I+ LLE LA H +
Sbjct: 558 DEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTE 605
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 33/324 (10%)
Query: 136 GKQIHAHVCKFGLKS-HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK +H H+ G K +I N L+ +Y +C +EA KVF++M+ R++ +WN++++GYA
Sbjct: 81 GKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYA 140
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+LG + AR LFD+M +VSW ++ Y G + EA+ ++R + + + + S
Sbjct: 141 KLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAG 200
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG---C------------ 299
VL C +L L+L + +H L V+ +++++ Y KCG C
Sbjct: 201 VLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKD 260
Query: 300 ----------------INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+N AS+LF QM E++ VSWS +I G A + H+A+ F +M +
Sbjct: 261 IHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMK 320
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+ P TF L ACA G + R + + I L+D+ + G L+
Sbjct: 321 FGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIV-VSSLIDMYSKCGMLE 379
Query: 404 QALNIIEEMPMKPDAKIWGSLLSS 427
+ + M K D +W +++S+
Sbjct: 380 ASCCVFHLMGNKQDVVVWNTMISA 403
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 166/394 (42%), Gaps = 88/394 (22%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDV---CN------------- 57
F +L C L EL K++H Q+L + L + ++D C
Sbjct: 198 FAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEML 257
Query: 58 -----------SG----GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102
SG GD+ AS LF Q+ E N ++A+I Y N L A++ + +
Sbjct: 258 VKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTK 317
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M++ I P+++T + +CA + GKQ+H ++ + + ++I ++L+D+Y
Sbjct: 318 MMKFG-----INPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMY 372
Query: 163 GKCDELIEAHKVFEEMTDR-DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
KC L + VF M ++ D+V WN +IS A+ G +KA +F+ M +
Sbjct: 373 SKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVES--------- 423
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-------EWIH-M 273
G++PD I+ + +L AC+ G ++ G + H +
Sbjct: 424 ----------------------GLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGV 461
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGC-INQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ D+ H + LI++ + GC + ++L + + D WS ++G H
Sbjct: 462 FPDQEHY-------SCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIE 514
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
+ + LK P + ++ L S A G W
Sbjct: 515 LGRKVAERVIELK-PQSSAAYVSLASLYAFLGKW 547
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 52/251 (20%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVI 286
G EAL ++ G+ V +L CA+ + G+ +H++ R T++
Sbjct: 41 GRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIV 100
Query: 287 CNALIEMYIKCGC-------------------------------INQASQLFDQMVERDV 315
N LI MY +CG +N A +LFD+M+E+DV
Sbjct: 101 ANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDV 160
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSW+T++ A G ++AI L+ + +RL + N +F G+L C
Sbjct: 161 VSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVK----------LKE 210
Query: 376 MKRDHHIEHKIEHYGCL---------VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
++ + ++ G L VD + G + A + +EM +K D W +++S
Sbjct: 211 LQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVK-DIHAWTTIVS 269
Query: 427 SCRTYSNLEIA 437
+ ++ A
Sbjct: 270 GYAKWGDMNSA 280
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 268/456 (58%), Gaps = 38/456 (8%)
Query: 76 NVFLYNAMIRAYTNNHLYGL---AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL- 131
+ FL N +IR + + A + MLR + + P+KFT PF++KSCA L
Sbjct: 96 DAFLVNTLIRTHVTSPFPSARRRAAAFFPLMLR-----AAVAPNKFTFPFLLKSCAALPG 150
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
P +G Q HA KFG + N L+ +Y
Sbjct: 151 SPDVGLQAHAAALKFGFAADHYVSNTLIHMYS--------------------------CF 184
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G LG AR +F++MP + V+W+AMI GY G ++A+ +FR MQ+ G+ PDE++
Sbjct: 185 GAGFLGD---ARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVT 241
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
++ VL A A LG+LEL W+ + ++ + + +CNALI+ KCG ++ A +F+ M
Sbjct: 242 VIGVLAAAADLGALELTRWVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGME 301
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
ER VVSW++VI LA G+ +A+ +F EM+ + V P+D+ FIG+L+AC+H G +EG
Sbjct: 302 ERTVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRG 361
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
YFDSMK ++ IE KIEHYGC+VD+ GRAG ++Q L + MPMKP+ IW +L+++CR +
Sbjct: 362 YFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAH 421
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
LE+ +LL P NYV+LSN+YA RW++ S +R+ + + +KK PGCSL
Sbjct: 422 GRLELGESITRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSL 481
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
+E++ EV EF++GD++ P K+I+ ++E ++ R
Sbjct: 482 VELDGEVHEFIAGDESHPQYKEIYRMVEEMSRELRR 517
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 153/360 (42%), Gaps = 45/360 (12%)
Query: 17 FVPILQSCENLIELKKI----HTQILKYLLSQSNFLVTKMIDV--CNSGGDLAYASLLFK 70
F +L+SC L + H LK+ + +++ +I + C G L A +F+
Sbjct: 138 FPFLLKSCAALPGSPDVGLQAHAAALKFGFAADHYVSNTLIHMYSCFGAGFLGDARNVFE 197
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + ++AMI Y L A+ L++ M S + PD+ T+ V+ + A L
Sbjct: 198 RMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGM-----QVSGVRPDEVTVIGVLAAAADL 252
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
L + + V + G+ NAL+D KC ++ A VFE M +R +V+W ++I
Sbjct: 253 GALELTRWVGRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVI 312
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
A G+ K EA+ VF +M+ VG+ PD++
Sbjct: 313 DALAMEGRGK-------------------------------EAVGVFEEMKAVGVLPDDV 341
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGCINQASQLFDQ 309
+ + VL AC+ G ++ G + + + +++M+ + G + Q +
Sbjct: 342 AFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRA 401
Query: 310 M-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M ++ + + W T++ HG+ + + + P ++ ++ L + A T W E
Sbjct: 402 MPMKPNPIIWRTLVAACRAHGRLELGESITRNLLN-EFPAHEANYVMLSNVYALTQRWKE 460
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/508 (35%), Positives = 291/508 (57%), Gaps = 50/508 (9%)
Query: 17 FVPILQSCENLIE---------LKKIHTQILKYLLSQSNFLVTK----MIDVCNSGGDLA 63
+P+++ C NL++ L++IH ++ +S S+ + K + S ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 64 YASLLFKQVKEP-NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPF 122
YA +F ++++P NVF++N +IR Y A++LY++M R + PD T PF
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREM----RASGFVEPDTHTYPF 126
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
++K+ + LG+ IH+ V + G S +N+LL LY C
Sbjct: 127 LLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC----------------- 169
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
G + A +FDKMP +V+W ++I+G+ G EAL ++ +M +
Sbjct: 170 --------------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDL 215
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
GI+PD +IVS+L ACA++G+L LG+ H+Y K L R N L+++Y +CG + +
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ-RLKVPPNDITFIGLLSACA 361
A LFD+MV+++ VSW+++I GLA +G +AI LF M+ + + P +ITF+G+L AC+
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACS 335
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G EG YF M ++ IE +IEH+GC+VDLL RAG++ +A I +MPM+P+ IW
Sbjct: 336 HCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIW 395
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
+LL +C + + ++A +A +L LEP +G+YVLLSN+YA RW DV ++RK +
Sbjct: 396 RTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRD 455
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
++K PG SL+EV N V EF+ GD + P
Sbjct: 456 GVRKVPGHSLVEVGNRVHEFLMGDKSHP 483
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 145/294 (49%), Gaps = 23/294 (7%)
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW---NNLISGYARLGQ---------- 198
S T LL + KC L++ + V R I A+ N + A LG+
Sbjct: 5 SETSVLLLPMVEKCINLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLP 64
Query: 199 ----MKKARMLFDKM--PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEIS 251
M A +F K+ P + W +I GY IG+ A+ ++R+M+ G +EPD +
Sbjct: 65 SPPPMSYAHKVFSKIEKPINVFI-WNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHT 123
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+L A ++ + LGE IH ++ + N+L+ +Y CG + A ++FD+M
Sbjct: 124 YPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E+D+V+W++VI G A +GK +A+ L+ EM + P+ T + LLSACA G G
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ M + + + L+DL R GR+++A + +EM K ++ W SL+
Sbjct: 244 FHVYMIKV-GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLI 295
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 283/492 (57%), Gaps = 8/492 (1%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F PIL++ L E ++H K F+ T ++D+ + G + YA +F ++
Sbjct: 117 FPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMS 176
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ +V +N MI Y L A L+++M S ++PD+ L ++ +C
Sbjct: 177 QRDVVTWNTMIERYCRFGLLDEAFKLFEEM-----KDSNVMPDEMILCNIVSACGRTGNM 231
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ I+ + + ++ + AL+ +Y + A + F +M+ R++ ++SGY
Sbjct: 232 RYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGY 291
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
++ G++ AR++FD+ +V WT MIS Y EAL VF +M GI+PD ++++
Sbjct: 292 SKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTML 351
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV+ AC LG+L+ +W+H Y N L I NALI MY KCG ++ A +F++M R
Sbjct: 352 SVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTR 411
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+VVSWS++I A HG+A ++ LF +M++ V PN++TF+G+L C+H+G EG F
Sbjct: 412 NVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 471
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM +++I KIEHYGC+VDL GRA L +AL +IE MPM P+ IWGSL+S+CR +
Sbjct: 472 ASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGE 531
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
LE+ +A + +L LEP+ G VL+SNIYA+ RW+ V +R ++ K + K G S I+
Sbjct: 532 LELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRID 591
Query: 494 VNNEVQEFVSGD 505
+N + EF+ GD
Sbjct: 592 LNGKSHEFLIGD 603
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 193/439 (43%), Gaps = 70/439 (15%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE-PNVFL 79
L C++L +K++H IL+ +++ + +S +L+YA LF + P +
Sbjct: 22 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISPLPESIV 81
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N+++R + + I L+ Q +R G D+ + P ++K+ + + G ++
Sbjct: 82 FNSLLRDLSRSGEPRATI-LFYQRIR--HVGGRF--DRISFPPILKAVSKVSALFEGMEL 136
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H K S E L+D+Y C + A VF+EM+ RD+V WN +I Y R G
Sbjct: 137 HGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFG-- 194
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
L D EA +F +M+ + PDE+ + +++ AC
Sbjct: 195 -----LLD------------------------EAFKLFEEMKDSNVMPDEMILCNIVSAC 225
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ-------------- 305
+ G++ I+ + +N + T + AL+ MY GC++ A +
Sbjct: 226 GRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVST 285
Query: 306 -----------------LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
+FDQ +D+V W+T+I A +A+ +F EM + P
Sbjct: 286 AMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKP 345
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ +T + ++SAC + G ++ + + +E + L+++ + G LD A ++
Sbjct: 346 DVVTMLSVISACVNLGTLDKA-KWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDV 404
Query: 409 IEEMPMKPDAKIWGSLLSS 427
E+MP + + W S++++
Sbjct: 405 FEKMPTR-NVVSWSSMINA 422
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 281/510 (55%), Gaps = 40/510 (7%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V + +C N+ L + +H Q +K S+ ++D+ + G+L A F+++
Sbjct: 657 LVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMG 716
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ V + ++I AY LY AI L+ +M + PD +++ V+ +CA
Sbjct: 717 QKTVVSWTSLIAAYVREGLYDDAIRLFYEM-----ESKGVSPDVYSMTSVLHACACGNSL 771
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+ +H ++ K + NAL+D+Y KC
Sbjct: 772 DKGRDVHNYIRKNNMALCLPVSNALMDMYAKC---------------------------- 803
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G M++A ++F ++P IVSW MI GY+ EAL +F +MQ PD I++
Sbjct: 804 ---GSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMA 859
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+LPAC L +LE+G IH +N + NALI+MY+KCG + A LFD + E+
Sbjct: 860 CLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEK 919
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+++W+ +I G HG ++AI F +M+ + P++ITF +L AC+H+G NEG +F
Sbjct: 920 DLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFF 979
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM + ++E K+EHY C+VDLL R G L +A N+IE MP+KPDA IWG+LL CR + +
Sbjct: 980 NSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHD 1039
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A EH+ LEP++ G YVLL+NIYA+ +WE+V ++R+ I + +KK+PGCS IE
Sbjct: 1040 VELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIE 1099
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
V + FVS D P K IF LL L +
Sbjct: 1100 VQGKFTTFVSADTAHPQAKSIFSLLNNLRI 1129
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 195/415 (46%), Gaps = 42/415 (10%)
Query: 15 DRFVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
+ + ILQ C L E K +H+ I + L K++ + S G L +F
Sbjct: 452 NAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDH 511
Query: 72 VKEPN-VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ N VFL+N M+ Y Y +I L+K+M + TG + +T ++K A L
Sbjct: 512 ILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITG-----NSYTFSCILKCFATL 566
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
K+IH V K G S++ N+L I
Sbjct: 567 GRVGECKRIHGCVYKLGFGSYNTVVNSL-------------------------------I 595
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+ Y + G++ A LFD++ +VSW +MISG G AL+ F QM ++ + D
Sbjct: 596 ATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLA 655
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++V+ + ACA +GSL LG +H K R + N L++MY KCG +N A Q F++M
Sbjct: 656 TLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKM 715
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
++ VVSW+++I G AI LF+EM+ V P+ + +L ACA ++G
Sbjct: 716 GQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGR 775
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ ++++ ++ + L+D+ + G +++A + ++P+K D W +++
Sbjct: 776 DVHNYIRKN-NMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMI 828
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 124/241 (51%), Gaps = 5/241 (2%)
Query: 189 LISGYARLGQMKKARMLFDK-MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
L+ Y G +++ R +FD + + W M+S Y IG Y E++ +F++MQ +GI
Sbjct: 492 LVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITG 551
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+ + +L A LG + + IH K + N+LI Y K G ++ A +LF
Sbjct: 552 NSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLF 611
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D++ +RDVVSW+++I G +G +H A+ F +M L+V + T + ++ACA+ G +
Sbjct: 612 DELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLS 671
Query: 368 EG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
G ++ +K ++ L+D+ + G L+ A+ E+M K W SL++
Sbjct: 672 LGRALHGQGVKA--CFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVS-WTSLIA 728
Query: 427 S 427
+
Sbjct: 729 A 729
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
I + +G A+++ R Q ++ + S S+L CA+ L+ G+ +H N +
Sbjct: 425 ICKFCEVGDLRNAVELLRMSQKSELDLNAYS--SILQLCAEHKCLQEGKMVHSVISSNGI 482
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMV-ERDVVSWSTVIGGLANHGKAHKAIHLFH 339
V+ L+ MY+ CG + + ++FD ++ + V W+ ++ A G ++I+LF
Sbjct: 483 PIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFK 542
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI--EHYGCLVDLL- 396
+MQ+L + N TF +L A G E KR H +K+ Y +V+ L
Sbjct: 543 KMQKLGITGNSYTFSCILKCFATLGRVGE-------CKRIHGCVYKLGFGSYNTVVNSLI 595
Query: 397 ---GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
++G +D A + +E+ + D W S++S C
Sbjct: 596 ATYFKSGEVDSAHKLFDELGDR-DVVSWNSMISGC 629
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 276/461 (59%), Gaps = 7/461 (1%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
M+ + G + A +F+ ++E ++ +NA+I Y N L +A+ + +ML T S
Sbjct: 235 MVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRML----TAS 290
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
+ PD+FT+ V+ +CA L +GKQ+H+++ + G+ S NAL+ Y K + A
Sbjct: 291 SMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETA 350
Query: 172 HKVFEE--MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
++ ++ + D +++++ L+ GY +LG K+AR +FD M +++WTAMI GY G
Sbjct: 351 RRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQ 410
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
EA+++FR M G EP+ ++ +VL ACA L L G+ IH ++ + + NA
Sbjct: 411 NDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNA 470
Query: 290 LIEMYIKCGCINQASQLFDQMVER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
+I +Y + G + A ++FDQ+ R + V+W+++I LA HG +AI LF EM R+ V P
Sbjct: 471 IITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKP 530
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ +T+IG+ SAC H GF ++G Y++ M +H I ++ HY C+VDLL RAG L +A
Sbjct: 531 DRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEF 590
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I+ MP+ PD +WGSLL++CR N ++A +A E LL ++P+++G Y L+N+Y+ GRW
Sbjct: 591 IQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRW 650
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
D +R+ KL + K++KK G S V ++V F + D P
Sbjct: 651 NDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHP 691
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 200/436 (45%), Gaps = 40/436 (9%)
Query: 44 QSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM 103
++ F ++ + G LA A ++F Q+ E + + M+ + A+ + M
Sbjct: 95 RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154
Query: 104 LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
+ G + P +F L V+ SCA +G+++H+ V K GL S N++L +YG
Sbjct: 155 V-----GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYG 209
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
KC + A VFE M R +WN ++S Y G+M A +F+ M +IVSW A+I+G
Sbjct: 210 KCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAG 269
Query: 224 YTHIGSYAEALDVF-RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
Y G AL F R + +EPDE ++ SVL ACA L L++G+ +H Y + +
Sbjct: 270 YNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPY 329
Query: 283 RTVICNALI---------------------------------EMYIKCGCINQASQLFDQ 309
+ I NALI E Y+K G QA ++FD
Sbjct: 330 SSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDV 389
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M RDV++W+ +I G +G+ +A+ LF M R PN T +LSACA + G
Sbjct: 390 MNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYG 449
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
R E + ++ + R+G + A + +++ + + W S++ +
Sbjct: 450 KQIHCRAIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALA 508
Query: 430 TYSNLEIAVIAMEHLL 445
+ E A++ E +L
Sbjct: 509 QHGLGEQAIVLFEEML 524
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 38/268 (14%)
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE----LIEAHKVFEEM--TDRDIVAW 186
PS G+ IHAH K GL + N LL Y + EA ++F+++ R+ W
Sbjct: 41 PSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTW 100
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
N+L+S YA+ G++ AR++F +MP VSWT M+ G G + +A+ F M G+
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS-- 304
P + + +VL +CA + +G +H + K L + N+++ MY KCG A
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220
Query: 305 -----------------------------QLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
+F+ M ER +VSW+ +I G +G A+
Sbjct: 221 FERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMAL 280
Query: 336 HLFHEM-QRLKVPPNDITFIGLLSACAH 362
F M + P++ T +LSACA+
Sbjct: 281 KFFSRMLTASSMEPDEFTVTSVLSACAN 308
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/468 (37%), Positives = 273/468 (58%), Gaps = 6/468 (1%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+ A LF ++ E +V +N ++ AY + AI LY RD R + + F+
Sbjct: 143 GDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLY----RDFRRLDMGF-NAFS 197
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
V+ C L L KQ+H V G S+ + ++++D Y KC E+ A +F+EM
Sbjct: 198 FAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEML 257
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+DI AW ++SGYA+ G M A LF +MP VSW+A+ISGY EALD F +
Sbjct: 258 VKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTK 317
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M GI P++ + S L ACA + +L+ G+ +H Y + + T++ ++LI+MY KCG
Sbjct: 318 MMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGM 377
Query: 300 INQASQLFDQMVER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ + +F M + DVV W+T+I LA +G KA+ +F++M + P+ ITFI +LS
Sbjct: 378 LEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILS 437
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H+G EGL +F +M DH + EHY CL+DLLGRAG + +N +E M KPD
Sbjct: 438 ACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDD 497
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
++W +LL CR ++N+E+ E ++ L+P+ + YV L+++YA G+WE V ++R+L+
Sbjct: 498 RVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELM 557
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQD 526
K ++K G S I+V N+ F++ D P ++I+ LLE LA H +
Sbjct: 558 DEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTE 605
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 33/324 (10%)
Query: 136 GKQIHAHVCKFGLKS-HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK +H H+ G K +I N L+ +Y +C +EA KVF++M+ R++ +WN++++GYA
Sbjct: 81 GKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYA 140
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+LG + AR LFD+M +VSW ++ Y G + EA+ ++R + + + + S
Sbjct: 141 KLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAG 200
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG---C------------ 299
VL C +L L+L + +H L V+ +++++ Y KCG C
Sbjct: 201 VLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKD 260
Query: 300 ----------------INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+N AS+LF QM E++ VSWS +I G A + H+A+ F +M +
Sbjct: 261 IHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMK 320
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+ P TF L ACA G + R + + I L+D+ + G L+
Sbjct: 321 FGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIV-VSSLIDMYSKCGMLE 379
Query: 404 QALNIIEEMPMKPDAKIWGSLLSS 427
+ + M K D +W +++S+
Sbjct: 380 ASCCVFHLMGNKQDVVVWNTMISA 403
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 165/394 (41%), Gaps = 88/394 (22%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCN---------------- 57
F +L C L EL K++H Q+L + L + ++D +
Sbjct: 198 FAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEML 257
Query: 58 -----------SG----GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102
SG GD+ AS LF Q+ E N ++A+I Y N L A++ + +
Sbjct: 258 VKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTK 317
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M++ I P+++T + +CA + GKQ+H ++ + + ++I ++L+D+Y
Sbjct: 318 MMKFG-----INPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMY 372
Query: 163 GKCDELIEAHKVFEEMTDR-DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
KC L + VF M ++ D+V WN +IS A+ G +KA +F+ M +
Sbjct: 373 SKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVES--------- 423
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-------EWIH-M 273
G++PD I+ + +L AC+ G ++ G + H +
Sbjct: 424 ----------------------GLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGV 461
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGC-INQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ D+ H LI++ + GC + ++L + + D WS ++G H
Sbjct: 462 FPDQEHY-------ACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIE 514
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
+ + LK P + ++ L S A G W
Sbjct: 515 LGRKVAERVIELK-PQSSAAYVSLASLYAFLGKW 547
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 103/251 (41%), Gaps = 52/251 (20%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR-RTVI 286
G EAL ++ GI V +L CA+ + G+ +H++ R T++
Sbjct: 41 GRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIV 100
Query: 287 CNALIEMYIKCGC-------------------------------INQASQLFDQMVERDV 315
N LI MY +CG +N A +LFD+M+E+DV
Sbjct: 101 ANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDV 160
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSW+T++ A G ++AI L+ + +RL + N +F G+L C
Sbjct: 161 VSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVK----------LKE 210
Query: 376 MKRDHHIEHKIEHYGCL---------VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
++ + ++ G L VD + G + A + +EM +K D W +++S
Sbjct: 211 LQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVK-DIHAWTTIVS 269
Query: 427 SCRTYSNLEIA 437
+ ++ A
Sbjct: 270 GYAKWGDMNSA 280
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 296/508 (58%), Gaps = 16/508 (3%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F IL++C + E K+IH ++K + + FL+ +I + GD+ +A +F ++
Sbjct: 128 FSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMP 187
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV-IKSCAGLLC 132
+ YN+MI Y + LA L+ M + + +LI + F K GL
Sbjct: 188 IQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDK--NLISWNSMLGGFAQTKDGIGLAL 245
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
K + ++ N ++ + KC + AH +F M RD+++W+N+I G
Sbjct: 246 ELFEKMPERDL---------VSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDG 296
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEPDEIS 251
YA+LG +K AR LFD+MP +V++ +++GY G Y EAL++F +MQ + PDE +
Sbjct: 297 YAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETT 356
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V L A +QLG +E +H Y +N + + ALI+MY KCG I A +FD +
Sbjct: 357 LVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVD 416
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
++ + W+ +I G+A +G A + EM RL V P+ ITFIG+L+ACAH G EGL+
Sbjct: 417 QKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLI 476
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
F+ M++ H +E K++HYGC+VD+LG+AG ++ AL IEEMP++P+ IW +LLS+C+ +
Sbjct: 477 CFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNH 536
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N I + +HL+ ++ ++ +YVLLSNIYA+ G W S++R +++ +++ K PGCS
Sbjct: 537 ENFTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSW 596
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
IE+ V EF+ D + P++ +I+ +L+
Sbjct: 597 IELEGVVHEFLVRDKSHPYVSEIYSVLD 624
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 233/455 (51%), Gaps = 44/455 (9%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---LAYASLLF------K 70
+L+ CE ++ ++H +I+K +++ L TK+I S + +A +F +
Sbjct: 20 LLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYAVQ 79
Query: 71 QVK----EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
+++ + + FL+NA+I++Y++ + A+ L+ ML + DKF+ ++K+
Sbjct: 80 RIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENG-----FCVDKFSFSLILKA 134
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
CA + GKQIH + K + S+ N L+ +Y +C ++ A +VF+ M +D V++
Sbjct: 135 CARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSY 194
Query: 187 NNLISGYARLGQMKKARMLFDKMPY--TTIVSWTAMISGYTHI-GSYAEALDVFRQMQMV 243
N++I GY + G + AR LFD MP ++SW +M+ G+ AL++F +M
Sbjct: 195 NSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMP-- 252
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALIEMYIKCGCINQ 302
E D +S +++ A+ G +E + N + +R VI + +I+ Y K G I
Sbjct: 253 --ERDLVSWNTIIGGFAKCGRIEFAHSLF-----NRMPKRDVISWSNMIDGYAKLGDIKV 305
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACA 361
A LFD+M ++DVV+++T++ G A +G +A+ +FHEMQR + P++ T + LSA +
Sbjct: 306 ARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAIS 365
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYG----CLVDLLGRAGRLDQALNIIEEMPMKPD 417
G + + ++ +E+ I G L+D+ + G ++ A+ I + + K
Sbjct: 366 QLGHVEKA-----ASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQK-G 419
Query: 418 AKIWGSLLSSC--RTYSNLEIAVIAMEHLLVLEPE 450
W +++S L ++ H L ++P+
Sbjct: 420 IDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPD 454
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/536 (35%), Positives = 290/536 (54%), Gaps = 7/536 (1%)
Query: 2 AARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD 61
A + GA + + + V + C + L ++ + + T M+ G
Sbjct: 175 ALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGC 234
Query: 62 LAYASLLFKQVKEP-NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
L K + E + YNAMI Y N LY A+ + ++M+ S I D+FT
Sbjct: 235 FDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMV-----SSGIELDEFTY 289
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
P VI++CA LGKQ+HA+V + S +N+L+ LY KC + EA +FE+M
Sbjct: 290 PSVIRACANARLLQLGKQVHAYVLRREDFSFHF-DNSLVTLYYKCGKFNEARAIFEKMPA 348
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
+D+V+WN L+SGY G + +A+++F +M I+SW MISG G E L +F M
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ G EP + + + +CA LG+ G+ H K NALI MY KCG +
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVV 468
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+A Q+F M D VSW+ +I L HG +A+ ++ EM + + P+ ITF+ +L+AC
Sbjct: 469 EEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTAC 528
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
+H G ++G YF+SM+ + I +HY L+DLL R+G+ +A +IIE +P KP A+I
Sbjct: 529 SHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEI 588
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
W +LLS CR + N+E+ +IA + L L PE G Y+LLSN+YA G+WE+V+R+RKL+R
Sbjct: 589 WEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRD 648
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
+ +KK CS IE+ +V F+ D + P + ++ L+ L R V D +
Sbjct: 649 RGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSF 704
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 203/419 (48%), Gaps = 64/419 (15%)
Query: 10 IKELEDRFVPILQSC-----ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
++ + +R+ L+ C +L + +H I+ + ++ ++IDV +L Y
Sbjct: 8 VRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDY 67
Query: 65 ASLLFKQVKEPN----------------------VF-----------LYNAMIRAYTNNH 91
A LF ++ EP+ VF +YNAMI +++N+
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNN 127
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK--QIHAHVCKFGLK 149
AINL+ +M + PD FT V+ A L+ + Q HA K G
Sbjct: 128 DGYSAINLFCKMKHEG-----FKPDDFTYASVLAGLA-LVVDDEKQCVQFHAAALKSGAG 181
Query: 150 SHSITENALLDLYGKCDE----LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
+ NAL+ +Y +C L A KVF+++ ++D +W +++GY + G + L
Sbjct: 182 YVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKEL 241
Query: 206 FDKMPYT-TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
M +V++ AMISGY + G Y EAL++ R+M GIE DE + SV+ ACA
Sbjct: 242 LKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARL 301
Query: 265 LELGEWIHMYCDKNHLLRRTVIC----NALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
L+LG+ +H Y +LRR N+L+ +Y KCG N+A +F++M +D+VSW+
Sbjct: 302 LQLGKQVHAY-----VLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNA 356
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++ G + G +A +F EM+ N ++++ ++S A GF EGL F MKR+
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKE----KNILSWMIMISGLAENGFGEEGLKLFSCMKRE 411
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 262/455 (57%), Gaps = 44/455 (9%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T MI S G L+ A +F ++ + NV + +MI Y N+ +A L++
Sbjct: 175 TNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFE-------- 226
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
++PDK + +T A+L Y + +
Sbjct: 227 ---VMPDK---------------------------------NEVTWTAMLKGYTRSGRIN 250
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
EA ++F+ M + + A N +I G+ G++ KAR +FD+M +W+A+I Y G
Sbjct: 251 EAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGF 310
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
EAL +F MQ G+ P+ SI+S+L C L SL+ G +H ++H + +
Sbjct: 311 ELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSV 370
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI MYIKCG + ++FD+ +D+V W+++I G A HG KA+ +FHEM P+
Sbjct: 371 LITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPD 430
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+ITFIG+LSAC +TG EGL F+SMK + ++ K EHY C+VDLLGRAG+L++A+N+I
Sbjct: 431 EITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLI 490
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
E MP++ DA +WG+LLS+CRT+ NL++A IA + LL LEP G Y+LLSN+YA RW+
Sbjct: 491 ENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWK 550
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
DV+ +RK +R++++ K+PGCS IEV+N+V F G
Sbjct: 551 DVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGG 585
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 146/309 (47%), Gaps = 19/309 (6%)
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE-NALLDLYGKCDELIEAHKVFE 176
F+ I C LG+ A L+S ++T NA++ Y EA K+F+
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
+M +R+ ++WN L+SGY + G + +AR +FDKMP +VSWT+M+ GY G EA +
Sbjct: 72 KMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELL 131
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
F +M E + +S +L + G ++ + ++ T + L
Sbjct: 132 FWRMP----EKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSE--- 184
Query: 297 CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
G +++A ++FD+M +R+VV+W+++I G A + K A LF M N++T+ +
Sbjct: 185 -GRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP----DKNEVTWTAM 239
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
L +G NE F +M + ++ G G + +A + ++M K
Sbjct: 240 LKGYTRSGRINEAAELFKAMP-----VKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKD 294
Query: 417 DAKIWGSLL 425
D W +L+
Sbjct: 295 DG-TWSALI 302
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 18 VPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
+ IL C +L L +++H+Q+++ ++ + +I + GDL +F +
Sbjct: 334 ISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSS 393
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
++ ++N++I Y + A+ ++ +M S PD+ T V+ +C
Sbjct: 394 KDIVMWNSIIAGYAQHGFGEKALEVFHEMF-----SSGAAPDEITFIGVLSACGYTGKVK 448
Query: 135 LGKQIHAHV-CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLISG 192
G +I + K+ + + ++DL G+ +L EA + E M + D + W L+S
Sbjct: 449 EGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
+++ I I + + G I++A +FD + + V SW+ ++ G ++ + +A
Sbjct: 9 RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF +M N I++ GL+S G +E FD M E + + +V
Sbjct: 69 LFDKMPER----NTISWNGLVSGYVKNGMISEARKVFDKMP-----ERNVVSWTSMVRGY 119
Query: 397 GRAGRLDQALNIIEEMPMK 415
+ G +D+A + MP K
Sbjct: 120 VQEGLIDEAELLFWRMPEK 138
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 291/524 (55%), Gaps = 19/524 (3%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+++H + K ++ T ++D+ A +F + E N+ +N++I Y N
Sbjct: 167 EQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQN 226
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG-LK 149
A+ L+ +M++D +PD+ TL V+ +CAGL G+Q+H + K +
Sbjct: 227 GPVDEALALFVRMMKDG-----FVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFR 281
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+ NAL+D+Y KC EA VF+ M R +V+ ++I+GYA+ + A+ +F +M
Sbjct: 282 EDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQM 341
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
+V+W +I+ Y H EAL +F +++ + P + +VL ACA L +L+LG+
Sbjct: 342 VEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQ 401
Query: 270 WIHMYCDKNHLL------RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
H++ K + N+L++MY+K G I+ +++F++M RD VSW+ +I
Sbjct: 402 QAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIV 461
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
G A +G+A A+ LF M P+ +T IG+LSAC H+G EG YF SM DH I
Sbjct: 462 GYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGII 521
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+HY C++DLLGRAG L + +IE MPM+PDA +W SLL +CR + N+++ A
Sbjct: 522 PTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGK 581
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVS 503
L L+P+++G YVLLSN+YA+ G+W DV R+R+ ++ + + K PGCS IE+ +V F++
Sbjct: 582 LFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFLA 641
Query: 504 GDDTKPFLKDIFWLLELLALHQDR-------AKDVIDIMYEDIG 540
D+ P +I L ++ + R A D+++ E G
Sbjct: 642 RDNIHPCRNEIHDTLRIIQMQMSRMSIDAEIADDLMNFSSEACG 685
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 188/453 (41%), Gaps = 86/453 (18%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
++ + ++ F ++ C G A LF + +P+ YNA++ A + G
Sbjct: 71 RVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGD 130
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
A+ M D + + ++ + +CA G+Q+HA V K S
Sbjct: 131 ALRFLAAMHADD-----FVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIG 185
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
AL+D+Y KC+ EA KVF+ M +R+IV+WN+LI+ Y + G +
Sbjct: 186 TALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVD--------------- 230
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
EAL +F +M G PDE+++ SV+ ACA L + G +H
Sbjct: 231 ----------------EALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRM 274
Query: 276 DKNHLLRRT-VICNALIEMYIKCGCINQASQLFD-------------------------- 308
K+ R V+ NAL++MY KCG +A +FD
Sbjct: 275 VKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDA 334
Query: 309 -----QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC--- 360
QMVE++VV+W+ +I A++ + +A+ LF ++R V P T+ +L+AC
Sbjct: 335 QAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANL 394
Query: 361 --------AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
AH EG + D E + LVD+ + G + + E M
Sbjct: 395 ANLQLGQQAHVHVLKEGFRF------DSGPESDVFVGNSLVDMYLKTGSISDGAKVFERM 448
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+ D W +++ + A++ E +L
Sbjct: 449 AAR-DNVSWNAMIVGYAQNGRAKDALLLFERML 480
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 122/260 (46%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
N LL Y + L +A +VF+ M R+ ++N L+S ARLG+ A LF +P
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
S+ A+++ G +AL M + S S L ACA + GE +H
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
K+ I AL++MY KC +A ++FD M ER++VSW+++I +G +A+
Sbjct: 174 TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEAL 233
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
LF M + P+++T ++SACA EG M + + LVD+
Sbjct: 234 ALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDM 293
Query: 396 LGRAGRLDQALNIIEEMPMK 415
+ GR +A + + M ++
Sbjct: 294 YAKCGRTWEAKCVFDRMAIR 313
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/504 (36%), Positives = 286/504 (56%), Gaps = 18/504 (3%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMI 84
E L E +++H + K + T ++D+ G L A +F ++ + LYN MI
Sbjct: 118 EMLREGEQVHVHVFKNGFQTDERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMI 177
Query: 85 RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
AY LA L++ ++P++ T + + H
Sbjct: 178 AAYMEAGEVELAEELFE-----------VMPERNTHTLMEMVGGYSARGDMDSAKHVFEM 226
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS-GYARLGQMKKAR 203
G+ + + A++ + K + +A VF+ M RD+ WN +I YA+ G ++ AR
Sbjct: 227 ANGVVNMVLC-TAMISGFAKTGSVDDARSVFDGMRQRDVATWNVMIGVMYAKCGLVEDAR 285
Query: 204 MLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLG 263
+FD MP +V WT+MISGYT +G + +A+ +FR MQ+ G++ D+ +I +V+ +C Q+G
Sbjct: 286 KVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMG 345
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
+L+LG ++H YCD + L + + N+LI+MY KCG I +A ++F +V+RD SW+ +I
Sbjct: 346 ALDLGRYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMIM 405
Query: 324 GLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
G A +G + +A+ LF +M+ +V PN+ITF+G+L++C+H G +G +F M + + I
Sbjct: 406 GFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYGI 465
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
+IEHYGC+VDLLGRA L +A IEEMP+ PD IW SLL +CR + +A E
Sbjct: 466 APRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLLFACRARGEVGLAEYVAE 525
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
+ LEP G VLLSN+YA RW DV+++R + + K PGCS+IEVN EF+
Sbjct: 526 RVEELEPSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSRVSKRPGCSVIEVNGCAHEFL 585
Query: 503 SGDDTKPFLKDIFWLL----ELLA 522
SGD+T + I+ +L ELLA
Sbjct: 586 SGDETHLETEAIYNILLGINELLA 609
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 187/406 (46%), Gaps = 24/406 (5%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
E+R V + C + +L+++H + + ++S+F+ K++ G L A +
Sbjct: 14 ENRLVGLAARCASARQLEQLHARAVLLGHARSSFVAAKLVRAFADLGHLRAARAVAAVRA 73
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+A R A+ LY QM R + P FT+ V+K+ A
Sbjct: 74 HSQSG-SSAAARD---------AVALYAQMHRGCPG---VRPLTFTVSSVLKAAARREML 120
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+H HV K G ++ L+DLY +C L +A +VF+ + +D +N +I+ Y
Sbjct: 121 REGEQVHVHVFKNGFQTDERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAY 180
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G+++ A LF+ MP + M+ GY+ G A VF +M + +
Sbjct: 181 MEAGEVELAEELFEVMPERNTHTLMEMVGGYSARGDMDSAKHVF---EMANGVVNMVLCT 237
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALIE-MYIKCGCINQASQLFDQMV 311
+++ A+ GS++ + + + +R V N +I MY KCG + A ++FD M
Sbjct: 238 AMISGFAKTGSVDDARSVF-----DGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMP 292
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
ER+VV W+++I G GK +A+ LF +MQ V +D T ++S+C G + G
Sbjct: 293 ERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLG-R 351
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
Y + H + I L+D+ + G + +A I + + D
Sbjct: 352 YVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDD 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 91/206 (44%), Gaps = 9/206 (4%)
Query: 9 SIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
+K + ++ SC + L + +H + L + + +ID+ + GD+ A
Sbjct: 326 GVKADDATIATVVSSCGQMGALDLGRYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKA 385
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F+ + + + F + MI + N L G A++L+ QM + ++P++ T V+
Sbjct: 386 HEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGE----VMPNEITFLGVLT 441
Query: 126 SCA-GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDI 183
SC+ G L H +G+ ++DL G+ L EA + EEM D+
Sbjct: 442 SCSHGGLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDV 501
Query: 184 VAWNNLISGYARLGQMKKARMLFDKM 209
W +L+ G++ A + +++
Sbjct: 502 AIWRSLLFACRARGEVGLAEYVAERV 527
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 279/486 (57%), Gaps = 40/486 (8%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQ 71
E +F+ + + C L +L ++H I++ Q+ F++ K+ID C + GD+ YA ++F +
Sbjct: 55 EQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDR 114
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ + FL+N MIR + N +A YK+ML I D FT F++K L
Sbjct: 115 IENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKG-----IAADNFTFSFLLKMTGQLG 169
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
LGKQ+H ++ K GL SH N L+ +YG
Sbjct: 170 SIMLGKQLHVNILKLGLDSHVYVRNTLIHMYG---------------------------- 201
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
RL + AR LFD++P T +V+W A+I + G Y EALD+F QM G+EPDE +
Sbjct: 202 ---RLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEAT 258
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V + AC+ LG+L+ G W+H + + N + + N+LI+MY KCG + A ++F+ +
Sbjct: 259 LVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVS 318
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV-PPNDITFIGLLSACAHTGFWNEGL 370
+++V+W+T+I GLA HG A A+ LF M +V P+ +TF+ +L AC + G EG
Sbjct: 319 GKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGR 378
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
YFD M + +I+ ++HYG +VD+LGRAG +++A +I+ MPM+ +A IW +LL++C+
Sbjct: 379 RYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQM 438
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK-TPGC 489
+ N+E+ H+L + + + +YVLL+N+YA G+W ++ + RK + K ++K PG
Sbjct: 439 HGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGN 498
Query: 490 SLIEVN 495
S +E+N
Sbjct: 499 SYLEIN 504
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 263/469 (56%), Gaps = 42/469 (8%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G + YA +F + P++F++NAM+R Y + G A +Y++M R + PD FT
Sbjct: 47 GRMGYARKVFDGIPRPDLFMHNAMVRGYAHAGAPGDAFAVYRRMTEASR----LRPDAFT 102
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL----------- 168
+++++CAGL G+Q+H V K G + NAL++++ KC +L
Sbjct: 103 FCYLLRACAGLPGSRAGRQVHGAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAG 162
Query: 169 --------------------IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
A K+F+E T +DIV WN ++ YA+ G+M+ AR LFD+
Sbjct: 163 EGDVVAWSAVIAGHAARGDMAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDR 222
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
P +VSW +I+GY G AL+VF +M+ G PDE +IVS+L CA G L+ G
Sbjct: 223 APEKDVVSWNTIITGYAAQGMLKHALEVFDEMRAAGWTPDEATIVSLLSCCANTGLLDAG 282
Query: 269 EWIHMYCDKNHLLRRT----VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
IH + HL RR V+ NAL+ MY KCG ++ A + F+ M + DV +W++VIGG
Sbjct: 283 RMIH---HQLHLERRPWISIVVGNALVSMYAKCGDLHTAVEGFNTMKDTDVWTWNSVIGG 339
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
LA HG+A +++ F +M ++ PN+I+F+ +L AC+H G +G +F MK + IE
Sbjct: 340 LAFHGQAEQSVRFFKKMLEKRIHPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIEP 399
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
HY C+VD+LGRAG LD+A I+ M +P A +W +LL +CRT+ N+ + + E L
Sbjct: 400 NARHYSCIVDMLGRAGLLDEAYAIVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVREKL 459
Query: 445 LVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L + + + +YVLLS IYA G W V R+ + + ++K G + I+
Sbjct: 460 LNMNEDASADYVLLSGIYASSGEWLGVETERRSMDRRGIRKAAGYAQID 508
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/451 (39%), Positives = 258/451 (57%), Gaps = 45/451 (9%)
Query: 78 FLYNAMIRAYTNNHLYGLA-----INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
FL+N +IRA+ I+++ +M + PD T PF+++S A
Sbjct: 25 FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHG-----VQPDFHTFPFLLQSFASPSL 79
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
LG+ +HA + +FGL D ++ +LIS
Sbjct: 80 LHLGRSVHAQILRFGLA---------------IDPFVQ----------------TSLISM 108
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI---EPDE 249
Y+ G + AR LF MP ++SW+ MI+GY G Y EAL +FR+MQM+G+ P+E
Sbjct: 109 YSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 168
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++ VL AC +LG+LE G+W H Y DK + V+ ALI+MY KCG + +A+ +F
Sbjct: 169 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 228
Query: 310 M-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ +DV++WS +I GLA HG A + + LF +M V PN +TF+ + AC H G +E
Sbjct: 229 LGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSE 288
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G Y M D+ I I+HYGC+VDL GRAGR+ +A N+++ MPM+PD +WG+LLS
Sbjct: 289 GKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGS 348
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R + ++E +A++ L+ LEP ++G YVLLSN+YAK GRWEDV +R L+ + +KK PG
Sbjct: 349 RMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPG 408
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
CSLIEV + EF GDD+ P + I +LE
Sbjct: 409 CSLIEVGGVLHEFFVGDDSHPETRQIHMMLE 439
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 156/345 (45%), Gaps = 45/345 (13%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+ +H QIL++ L+ F+ T +I + +S G + A LF + E NV ++ MI Y
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRC 143
Query: 91 HLYGLAINLYKQM----LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
Y A+ L+++M + D R P++FT+ V+ +C L GK HA++ K
Sbjct: 144 GQYKEALALFREMQMLGVNDVR------PNEFTMSGVLAACGRLGALEHGKWAHAYIDKC 197
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLISGYARLGQMKKARML 205
G+ + AL+D+Y KC + +A VF + ++D++AW+ +ISG A G +
Sbjct: 198 GMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAE----- 252
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
E + +F +M G+ P+ ++ ++V AC G +
Sbjct: 253 --------------------------ECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLV 286
Query: 266 ELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIG 323
G +++ + ++ ++++Y + G I +A + M +E DV+ W ++
Sbjct: 287 SEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLS 346
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
G HG ++ L+ P N ++ L + A G W +
Sbjct: 347 GSRMHGDIETCELALKKLIELE-PTNSGAYVLLSNVYAKRGRWED 390
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 123/301 (40%), Gaps = 18/301 (5%)
Query: 5 IGALSIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGD 61
+G ++ E +L +C L L K H I K + L T +ID+ G
Sbjct: 159 LGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGS 218
Query: 62 LAYASLLFKQVKEPN--VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
+ A+ +F + PN V ++AMI + L + L+ +M+ + P+ T
Sbjct: 219 VEKATWVFSNLG-PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQG-----VRPNAVT 272
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCK-FGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
V +C S GK + + + + ++DLYG+ + EA V + M
Sbjct: 273 FLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSM 332
Query: 179 T-DRDIVAWNNLISGYARLGQMKKARMLFDK---MPYTTIVSWTAMISGYTHIGSYAEAL 234
+ D++ W L+SG G ++ + K + T ++ + + Y G + +
Sbjct: 333 PMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVR 392
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
V M+ +GI+ ++ S++ L +G+ H + H++ ++ +E Y
Sbjct: 393 HVRDLMETMGIK--KVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGY 450
Query: 295 I 295
+
Sbjct: 451 V 451
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 178/474 (37%), Positives = 273/474 (57%), Gaps = 46/474 (9%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G + A LF ++ +V +NAMI Y Y A+ L+K+M+
Sbjct: 159 TALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTN- 217
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ PD+ T+ V+ +CA LG+ +H+ + G S+ NAL+DLY K
Sbjct: 218 ---VRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSK----- 269
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LFD + ++SW +I GYTH+
Sbjct: 270 --------------------------FGEVETACELFDGLWNKDVISWNTLIGGYTHMNL 303
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN- 288
Y EAL +F++M G P++++++S+LPACA LG++++G WIH+Y +K + V+ N
Sbjct: 304 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKK---LKGVVTNV 360
Query: 289 -----ALIEMYIKCGCINQASQLFDQ-MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
+LI+MY KCG I+ A Q+FD M R + +W+ +I G A HG+A+ A +F M+
Sbjct: 361 SSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMR 420
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+ P+DITF+GLLSAC+H+G + G F SM R + I K+EHYGC++DLLG +G
Sbjct: 421 MNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLF 480
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIY 462
+A +I MPM+PD IW SLL +C+ + NLE+ + L+ +EP ++G+YVLLSNIY
Sbjct: 481 KEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIY 540
Query: 463 AKHGRWEDVSRMRKLIRSKSM-KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
A GRW +V+++R L+ K M KK PGCS IE+++ V EF+ GD P ++I+
Sbjct: 541 AAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 594
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 240/439 (54%), Gaps = 15/439 (3%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSG---GDLAYASLLFKQVKEPNVFLYNAMIRA 86
++ IH Q++K L +N+ ++K+++ C YA +F ++EPN+ ++N M R
Sbjct: 4 VRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
+ + A+ LY M+ SL +LPD +T PF++KSCA G+QIH HV K
Sbjct: 64 HALSSDPVSALKLYLVMI------SLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLK 117
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
G +L+ +Y + L +A KVF+ + RD+V++ LI+GY G ++ A+ L
Sbjct: 118 LGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKL 177
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV-GIEPDEISIVSVLPACAQLGS 264
FD++P +VSW AMISGY G+Y EAL++F++M M+ + PDE ++V+V+ ACAQ S
Sbjct: 178 FDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDS 237
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
+ELG +H + + + I NALI++Y K G + A +LFD + +DV+SW+T+IGG
Sbjct: 238 IELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGG 297
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG--LMYFDSMKRDHHI 382
+ +A+ LF EM R PND+T + +L ACAH G + G + + + K +
Sbjct: 298 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVV 357
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY--SNLEIAVIA 440
+ L+D+ + G +D A + + W +++S + +N + +
Sbjct: 358 TNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFS 417
Query: 441 MEHLLVLEPEDTGNYVLLS 459
+ +EP+D LLS
Sbjct: 418 RMRMNGIEPDDITFVGLLS 436
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 181/369 (49%), Gaps = 46/369 (12%)
Query: 9 SIKELEDRFVPILQSC--ENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
+++ E V ++ +C + IEL + +H+ I + + + +V +ID+ + G++ A
Sbjct: 217 NVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETA 276
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF + +V +N +I YT+ +LY A+ L+++MLR T P+ T+ ++
Sbjct: 277 CELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-----PNDVTMLSILP 331
Query: 126 SCAGLLCPSLGKQIHAHVCKF--GLKSH-SITENALLDLYGKCDELIEAHKVFEE-MTDR 181
+CA L +G+ IH ++ K G+ ++ S + +L+D+Y KC ++ A +VF+ M++R
Sbjct: 332 ACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNR 391
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+ WN +ISG+A G+ A D+F +M+
Sbjct: 392 SLSTWNAMISGFAMHGRANA-------------------------------AFDIFSRMR 420
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH-LLRRTVICNALIEMYIKCGCI 300
M GIEPD+I+ V +L AC+ G L+LG I + + + + +I++ G
Sbjct: 421 MNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLF 480
Query: 301 NQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+A ++ + M +E D V W +++ HG ++ +++ P N +++ L +
Sbjct: 481 KEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIE-PGNSGSYVLLSNI 539
Query: 360 CAHTGFWNE 368
A G WNE
Sbjct: 540 YAAAGRWNE 548
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 288/506 (56%), Gaps = 8/506 (1%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L +C N+ + K +H +I++ + ++D+ G + + +F ++
Sbjct: 128 YASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLR 187
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E NV + ++I + +++ QM +D ++ D F L ++ C G
Sbjct: 188 EHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKD-----CVIMDNFILATILGVCEGETNI 242
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S+G+Q+H K G+ S NA L +Y KC + +A FE M D+++W +I+ +
Sbjct: 243 SIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSF 302
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G +++AR F++MP ++SW AM+ Y + E L ++ M + PD I+ V
Sbjct: 303 SHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFV 362
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+++ AC++L +LG I K L + N+ I +Y +CG I +A LFD + E+
Sbjct: 363 TMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEK 422
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+++SW++++GG A +G+ K I +F M P+ IT+I +LS C+H+G E +F
Sbjct: 423 NLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHF 482
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM +D I +EH+ C+VDL GRAG L AL++I++MP KP+A IWG+LLS+CR + +
Sbjct: 483 NSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHD 542
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
E+A +AM++LL L E+ +Y+LL+N Y+ GR E VS +R++++ K ++K PGCS IE
Sbjct: 543 TEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIE 602
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
V N V F + D + P +KDI+ LE
Sbjct: 603 VCNRVHVFTANDTSHPQVKDIYKALE 628
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 135/236 (57%), Gaps = 5/236 (2%)
Query: 130 LLCPSLG-----KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
+ C S+G Q+H K+G ++ + +N+++D+Y KCD + A +VF + +
Sbjct: 1 MACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLF 60
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+WN +I GY++L +M +A F +MP VSW +IS ++H G + ++L F +M + G
Sbjct: 61 SWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQG 120
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+P+ ++ SVL ACA + + G+ +H + ++ N L++MY KCG I+ +
Sbjct: 121 CQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASK 180
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
++F+ + E +VV+W+++I G+A+ G + +F++M++ V ++ +L C
Sbjct: 181 RVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVC 236
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 61/373 (16%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
++H KY + + +ID+ + A +F ++++P++F +N MI Y+ H
Sbjct: 14 QLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSWNCMIYGYSKLH 73
Query: 92 LYGLAINLYKQML-RDPRTGSLIL-------------------------PDKFTLPFVIK 125
G AI+ ++QM RD + + I+ P+ T V+
Sbjct: 74 EMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLS 133
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA + GK +HA + + + N L+D+Y KC + + +VF + + ++V
Sbjct: 134 ACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVT 193
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W +LISG A H GS E D+F QM+ +
Sbjct: 194 WTSLISGIA-------------------------------HFGSQEEVYDIFYQMRKDCV 222
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
D + ++L C ++ +GE +H + K + + NA + MY KCG +AS
Sbjct: 223 IMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASL 282
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
F+ M DV+SW+T+I ++ G +A F+ M V I++ +L A F
Sbjct: 283 AFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNV----ISWNAMLGAYCQNSF 338
Query: 366 WNEGLMYFDSMKR 378
W EGL + M R
Sbjct: 339 WEEGLKLYILMLR 351
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 271/459 (59%), Gaps = 39/459 (8%)
Query: 76 NVFLYNAMIRAYTNNHLYGL---AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ FL N +IRA+ + L A + + MLR S LP+KFT PF++K+CA
Sbjct: 107 DAFLANTLIRAHAASPLPSARLRAASFFPLMLR-----SATLPNKFTFPFLLKACAAF-- 159
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
P +G Q HA KFG + N L+ +Y G
Sbjct: 160 PGVGVQAHAAALKFGFTTDQYVSNTLIHMYS--------------------------CFG 193
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
LG AR +FD+M ++ V+W+AMI GY G ++A+ +FR+MQ G+ PDE+++
Sbjct: 194 GEFLGD---ARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVTM 250
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+ VL A A LG+LEL W+ + +K + + +CNALI+ KCG ++ A +F M E
Sbjct: 251 IGVLAAAADLGALELARWVGRFVEKEGIGKSVTLCNALIDALAKCGDLDGAMAVFQGMKE 310
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
R +VSW++VI LA G+ +A+ +F EM+ V P+D+ FIG+L+AC+H G +EG Y
Sbjct: 311 RTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYGY 370
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F+SM+ + I+ KIEHYGC+VD+ GRAG +++A+ + +MPMKP+ IW +L+++CR +
Sbjct: 371 FESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNPIIWRTLVAACRAHG 430
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
LE+ +LL P NYV+LSN+YA RW++ S +R+ + + +KK PGCSL+
Sbjct: 431 RLELGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIRREMSKRGIKKVPGCSLV 490
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
E++ EV EF++GD++ P K+I+ ++E +A RA +
Sbjct: 491 ELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHI 529
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 157/360 (43%), Gaps = 48/360 (13%)
Query: 17 FVPILQSCENLIELK-KIHTQILKYLLSQSNFLVTKMIDV--CNSGGDLAYASLLFKQVK 73
F +L++C + + H LK+ + ++ +I + C G L A +F ++
Sbjct: 149 FPFLLKACAAFPGVGVQAHAAALKFGFTTDQYVSNTLIHMYSCFGGEFLGDARNVFDRMA 208
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ + ++AMI Y + L A+ L+++M S + PD+ T+ V+ + A L
Sbjct: 209 KSSAVTWSAMIGGYVRSGLSSDAVGLFREM-----QASGVRPDEVTMIGVLAAAADLGAL 263
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
L + + V K G+ NAL+D KC +L A VF+ M +R IV+W ++I
Sbjct: 264 ELARWVGRFVEKEGIGKSVTLCNALIDALAKCGDLDGAMAVFQGMKERTIVSWTSVIDAL 323
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G+ K EA+ VF +M+ G+ PD+++ +
Sbjct: 324 AMEGRGK-------------------------------EAVAVFEEMKTAGVRPDDVAFI 352
Query: 254 SVLPACAQLGSLELG----EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
VL AC+ G ++ G E + M + + +++M+ + G + +A + +
Sbjct: 353 GVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHY---GCMVDMFGRAGMVERAMEFVHK 409
Query: 310 M-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M ++ + + W T++ HG+ + + + P ++ ++ L + A T W E
Sbjct: 410 MPMKPNPIIWRTLVAACRAHGRLELGETITRNLLN-EYPAHEANYVMLSNVYALTRRWKE 468
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/497 (36%), Positives = 276/497 (55%), Gaps = 42/497 (8%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
++H IL Q FL TK+I + + G + YA +F + ++ ++++NA+ RA T
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP----SLGKQIHAHVCKFG 147
+ LY +M R G + D+FT +V+K+C C + GK+IHAH+ + G
Sbjct: 158 HGEEVLGLYWKM---NRIG--VESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRG 212
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
SH L+D+Y AR G + A +F+
Sbjct: 213 YNSHVYIMTTLVDMY-------------------------------ARFGCVDYASYVFN 241
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM--QMVGIEPDEISIVSVLPACAQLGSL 265
MP +VSW+AMI+ Y G EAL FR+M + P+ +++VSVL ACA L +L
Sbjct: 242 GMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAAL 301
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
E G IH Y + L + +AL+ MY +CG ++ ++FD+M +RDVVSW+++I
Sbjct: 302 EQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSY 361
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
HG KAI +F EM P +TF+ +L AC+H G EG F+SM RDH I+ +
Sbjct: 362 GVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQ 421
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+EHY C+VDLLGRA RLD+A ++++M +P K+WGSLL SCR + N+E+A A L
Sbjct: 422 VEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF 481
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
LEP++ GNYVLL++IYA+ W++V R++KL+ + ++K PG +EV ++ FVS D
Sbjct: 482 ALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMD 541
Query: 506 DTKPFLKDIFWLLELLA 522
+ P ++ I L LA
Sbjct: 542 EFNPLMEQIHAFLVKLA 558
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 189/406 (46%), Gaps = 62/406 (15%)
Query: 4 RIGALSIKELEDRFVP--ILQSC-------ENLIELKKIHTQILKYLLSQSNFLVTKMID 54
RIG S DRF +L++C ++L + K+IH + + + +++T ++D
Sbjct: 171 RIGVES-----DRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVD 225
Query: 55 VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL 114
+ G + YAS +F + NV ++AMI Y N A+ +++M+ + + S
Sbjct: 226 MYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSS--- 282
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P+ T+ V+++CA L G+ IH ++ + GL S +AL+ +YG+C +L +V
Sbjct: 283 PNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRV 342
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F+ M DRD+V+WN+LIS Y + GY +A+
Sbjct: 343 FDRMHDRDVVSWNSLISSYG--------------------------VHGYGR-----KAI 371
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA-LIEM 293
+F +M G P ++ VSVL AC+ G +E G+ + ++H ++ V A ++++
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDL 431
Query: 294 YIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
+ +++A+++ M E W +++G HG A + L+ P N
Sbjct: 432 LGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE-PKNAGN 490
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
++ L A W+E +KR ++ +EH G L L GR
Sbjct: 491 YVLLADIYAEAQMWDE-------VKR---VKKLLEHRG-LQKLPGR 525
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 138/338 (40%), Gaps = 39/338 (11%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P + T +I C S G ++H H+ G L+ +Y + A KV
Sbjct: 75 PSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F++ R I WN A+ T G E L
Sbjct: 135 FDKTRKRTIYVWN-------------------------------ALFRALTLAGHGEEVL 163
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACA----QLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
++ +M +G+E D + VL AC L G+ IH + + I L
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTL 223
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPP 348
++MY + GC++ AS +F+ M R+VVSWS +I A +GKA +A+ F EM + P
Sbjct: 224 VDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSP 283
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N +T + +L ACA +G + + R ++ + LV + GR G+LD +
Sbjct: 284 NSVTMVSVLQACASLAALEQGRLIHGYILR-RGLDSILPVISALVTMYGRCGKLDVGQRV 342
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
+ M + D W SL+SS + A+ E +L
Sbjct: 343 FDRMHDR-DVVSWNSLISSYGVHGYGRKAIQIFEEMLA 379
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
+S +I G +AL V Q P + + ++ C SL G +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQALRVLSQES----SPSQQTYELLILCCGHRSSLSDGLRVHRH 102
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
N + + LI MY G ++ A ++FD+ +R + W+ + L G +
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHT----GFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+ L+ +M R+ V + T+ +L AC + +G + R + H +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSH-VYIMT 221
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
LVD+ R G +D A + MP++ + W ++++
Sbjct: 222 TLVDMYARFGCVDYASYVFNGMPVR-NVVSWSAMIA 256
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 180/523 (34%), Positives = 302/523 (57%), Gaps = 21/523 (4%)
Query: 9 SIKELEDR--------FVPILQSC--ENLIEL-KKIHTQILK--YLLSQSNFLVTKMIDV 55
SI+ LE R + +++ C N I +++H+ IL + SQ FL +I++
Sbjct: 47 SIQLLESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEM 106
Query: 56 CNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP 115
G L YA LF+ + NV + + A+++N + A+ +++M + P
Sbjct: 107 YGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGER-----P 161
Query: 116 DKFTLPFVIKSCAGLLCPSL--GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHK 173
D+ T ++ + A + ++ G++IH + GL + + A++ +YGKC L +A
Sbjct: 162 DRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARA 221
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
FEE+ ++ V WN +++ Y G+ ++A LF +M V W AMI+ Y G +A
Sbjct: 222 AFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQA 281
Query: 234 LDVFRQMQ-MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
LD++R M + P + + V+V+ CA+L +L+ G IH + ++ NAL+
Sbjct: 282 LDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVH 341
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
MY KCGC+++A +F M +D +SW+T+I A HG + +A+ L+ EM V P ++T
Sbjct: 342 MYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVT 401
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
F+GLLSAC+H G +GL YF M+ DH I+ + H+GC++DLLGR GRL +A +++ M
Sbjct: 402 FVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSM 461
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVS 472
P++ +A W SLL +C+T+ +L+ V A + ++ P +G YVLLSNIYA GRW+DV
Sbjct: 462 PIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVE 521
Query: 473 RMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
++RK++ ++ +KK+PG S IE+ + V EFVSGD + P ++I+
Sbjct: 522 KIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIY 564
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 268/463 (57%), Gaps = 13/463 (2%)
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
G L YA +F + P+ FL A++R HL + ++ R LP
Sbjct: 101 GAPLRYAVAVFSSLSPPDPFLAAALLRF---AHLTQPPLETFRLFSRLRCAHGSDLP--- 154
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKF-----GLKSHSITENALLDLYGKCDELIEAHK 173
LPF A + A G H EN+L+ Y C ++ A K
Sbjct: 155 FLPFAFSPLAKSAAAARSLHAAASAHAVSLLLGGFDKHRFVENSLISAYVACGDVGAARK 214
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
VF+EM +D+++W +++ Y+R+ M A +F P +V+WTAM++GY +A
Sbjct: 215 VFDEMLVKDVISWTSIVVAYSRIRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKA 274
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
L+ F QM + G+ DE+S+ + ACAQLG+++ W+ ++N L R V+ + L++M
Sbjct: 275 LEAFEQMAVAGMPIDEVSLTGAISACAQLGAVKRAAWVQEIAERNGLGRNVVVGSGLVDM 334
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDIT 352
Y KCG I++A ++F+ M +++V ++S++I GLA+HG+A+ I LF++M +R V PN +T
Sbjct: 335 YAKCGLIDEARKVFEGMHDKNVYTYSSMIVGLASHGRANDVIALFNDMVRRADVEPNHVT 394
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
FIG+L+AC+H G EG YF MK + I +HY C+VDLL R+G + +AL++++ M
Sbjct: 395 FIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYACMVDLLARSGLVTEALDLVKSM 454
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVS 472
++P +WG+LL +CR + N E+A IA EHL LEPE GNYVLLSN A G W++VS
Sbjct: 455 TVEPHGGVWGALLGACRIHGNTEVAKIAAEHLFRLEPEGIGNYVLLSNTLASAGEWDEVS 514
Query: 473 RMRKLIRSKSMKKTPGCSLIEVNNE-VQEFVSGDDTKPFLKDI 514
++RKL+R + +KK P S E + V +F +GD+T P + +I
Sbjct: 515 KLRKLMRIRGLKKDPAVSWFEGRDGFVHQFFAGDNTHPSMHEI 557
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 304/570 (53%), Gaps = 71/570 (12%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTK----------------MIDVCNSG 59
+ V + +C +L E +++ + K + NF+V++ M++ G
Sbjct: 139 KLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 198
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
AS LF ++ + +V +N+MI Y +N L + +YKQM+ I D T
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLG-----IDVDLAT 253
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ V+ CA SLGK +H+ K + N LLD+Y KC +L A +VFE+M
Sbjct: 254 IISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 180 DRDIVAWNNLISGYARLG----------QMKKARMLFDKMPYTTIVS------------- 216
+R++V+W ++I+GY R G QM+K + D + T+I+
Sbjct: 314 ERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKD 373
Query: 217 ----------------WTAMISGYTHIGSYAEALDVFRQM---------QMVG-IEPDEI 250
A++ YT GS A VF M M+G ++PD
Sbjct: 374 VHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSR 433
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++ +LPACA L +LE G+ IH Y +N + NAL+++Y+KCG + A LFD +
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+D+VSW+ +I G HG ++AI F+EM+ + P++++FI +L AC+H+G +G
Sbjct: 494 PSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+F MK D +IE K+EHY C+VDLL R G L +A IE +P+ PDA IWG+LL CR
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRI 613
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
Y ++E+A E + LEPE+TG YVLL+NIYA+ +WE+V RMR+ I K ++K PGCS
Sbjct: 614 YHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCS 673
Query: 491 LIEVNNEVQEFVSGDDTK-PFLKDIFWLLE 519
IE+ +V FVSG+++ P K I LL+
Sbjct: 674 WIEIKGKVNLFVSGNNSSHPHSKKIESLLK 703
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 180/350 (51%), Gaps = 34/350 (9%)
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
T V++ CAG + GK++H+ + + + L+ LY C +L E +VF+ M
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTM 160
Query: 179 TDRDIVAWNNLISGYARLGQMKK--------------------ARMLFDKMPYTTIVSWT 218
+++ WN ++S YA++G K+ A LFDK+ ++SW
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
+MISGY G L++++QM +GI+ D +I+SVL CA G+L LG+ +H K+
Sbjct: 221 SMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280
Query: 279 HLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLF 338
RR N L++MY KCG ++ A ++F++M ER+VVSW+++I G G++ AI L
Sbjct: 281 TFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLL 340
Query: 339 HEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
+M++ V + + +L ACA +G + G D +K + ++E + L+D+ +
Sbjct: 341 QQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYTK 399
Query: 399 AGRLDQALNIIEEM-------------PMKPDAKIWGSLLSSCRTYSNLE 435
G +D A ++ M +KPD++ +L +C + S LE
Sbjct: 400 CGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALE 449
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 280/495 (56%), Gaps = 42/495 (8%)
Query: 19 PIL--QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG---GDLAYASLLFKQVK 73
PIL C +L EL +I +K + +F V K+I+ C ++YA LF+ +
Sbjct: 32 PILLISKCNSLRELMQIQAYAIKSHIEDVSF-VAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
EP++ ++N+M R Y+ +L+ ++L D ILPD +T P ++K+CA
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDG-----ILPDNYTFPSLLKACAVAKAL 145
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+H K GL + L+++Y +C+++
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDV------------------------- 180
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR +FD++ +V + AMI+GY EAL +FR+MQ ++P+EI+++
Sbjct: 181 ------DSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLL 234
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL +CA LGSL+LG+WIH Y K+ + + ALI+M+ KCG ++ A +F++M +
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +WS +I ANHGKA K++ +F M+ V P++ITF+GLL+AC+HTG EG YF
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M I I+HYG +VDLL RAG L+ A I+++P+ P +W LL++C +++N
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L++A E + L+ G+YV+LSN+YA++ +WE V +RK+++ + K PGCS IE
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Query: 494 VNNEVQEFVSGDDTK 508
VNN V EF SGD K
Sbjct: 475 VNNVVHEFFSGDGVK 489
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 162/325 (49%), Gaps = 12/325 (3%)
Query: 154 TENALLDLYGKCDEL-----IEAHKVFEEMTDRDIVA-WNNLISGYARLGQMKKARMLFD 207
T+N +L L KC+ L I+A+ + + D VA N + M AR LF+
Sbjct: 29 TQNPIL-LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFE 87
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
M IV + +M GY+ + E +F ++ GI PD + S+L ACA +LE
Sbjct: 88 AMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEE 147
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
G +H K L +C LI MY +C ++ A +FD++VE VV ++ +I G A
Sbjct: 148 GRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYAR 207
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
+ ++A+ LF EMQ + PN+IT + +LS+CA G + G + + H ++
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHSFCKYVK 266
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV- 446
L+D+ + G LD A++I E+M K D + W +++ + + E +++ E +
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAEKSMLMFERMRSE 325
Query: 447 -LEPEDTGNYVLLSNIYAKHGRWED 470
++P++ ++ L N + GR E+
Sbjct: 326 NVQPDEI-TFLGLLNACSHTGRVEE 349
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 140/277 (50%), Gaps = 20/277 (7%)
Query: 5 IGALSIKELEDRFVP-------ILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMID 54
+ +L ++ LED +P +L++C + L E +++H +K L + ++ +I+
Sbjct: 113 VFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLIN 172
Query: 55 VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL 114
+ D+ A +F ++ EP V YNAMI Y + A++L+++M G +
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM-----QGKYLK 227
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P++ TL V+ SCA L LGK IH + K + AL+D++ KC L +A +
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSI 287
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSY 230
FE+M +D AW+ +I YA G+ +K+ ++F++M + +++ +++ +H G
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 231 AEALDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLE 266
E F QM GI P S++ ++ G+LE
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLE 384
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 183/495 (36%), Positives = 284/495 (57%), Gaps = 11/495 (2%)
Query: 17 FVPILQSCENLIELKKIHTQIL-KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
F+ ++++ L E+K+IH I+ LS N+L ++ G L +A +F + +P
Sbjct: 135 FLHLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQP 194
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+V +N MI Y A+ LY +M+ D I PD++TL ++ C L L
Sbjct: 195 DVSSFNVMIVGYAKQGFGLEALELYYKMVSDG-----IEPDEYTLLGLLVCCGHLSDIRL 249
Query: 136 GKQIHAHVCKFG--LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK +H + + G S+ I NALLD+Y KC E A + F+ + +D+ +WN ++ G+
Sbjct: 250 GKGVHGWIERRGPVYSSNLILRNALLDMYFKCKESGLAKRAFDALKKKDMRSWNTMVVGF 309
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL-DVFRQMQMV-GIEPDEIS 251
RLG M+ A+ +FD+MP +VSW +++ Y+ G A+ ++F +M +V ++PD ++
Sbjct: 310 VRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEKVKPDRVT 369
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VS++ A G L G W+H + L + +ALI+MY KCG I +A +F
Sbjct: 370 MVSLISGAANNGELSHGRWVHGLMIRLQLEGDAFLSSALIDMYCKCGLIERAFMVFKTAT 429
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E+DV W+++I G A HG +A+ LF MQ V PN +T + +L+AC+H+G EGL
Sbjct: 430 EKDVPLWTSMITGFAFHGYGQQALQLFKRMQEEDVTPNKVTLLAVLTACSHSGLVEEGLH 489
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE-EMPMKPDAKIWGSLLSSCRT 430
F MK + EHYG LVDLL RAGRL++A +I++ +MPM+P +WGS+LS+CR
Sbjct: 490 VFYHMKEKFGFHPETEHYGSLVDLLCRAGRLEEAKDIVQNKMPMRPSQSMWGSILSACRE 549
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
++E A +A+ LL LEPE G YVLLSNIYA GRW + R+ + S+ +KKT G S
Sbjct: 550 GEDIETAELALSELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMESRGVKKTAGYS 609
Query: 491 LIEVNNEVQEFVSGD 505
+ V FV+ +
Sbjct: 610 SVVGVEGVHSFVAAE 624
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 212/461 (45%), Gaps = 96/461 (20%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSGGDLAYASLLF 69
+L + + +L++C + + K++ QI+++ L F ++++I +L A LLF
Sbjct: 31 QLNHQSLVLLENCSSRNQFKQVLAQIMRFNLIGVTFPMSRLIFFSAITYPENLDLAKLLF 90
Query: 70 KQ-VKEPNVFLYNAMIRAYTN--NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
PNVF+YN MI A ++ N +G LY M+R + PD+ T ++K+
Sbjct: 91 LDFTPNPNVFVYNTMISAVSSSKNECFG----LYSSMIR-----YRVSPDRQTFLHLMKA 141
Query: 127 CAGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+ L S KQIH H+ G L + N+L+ Y + L A KVF M D+ +
Sbjct: 142 SSFL---SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVSS 198
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
+N +I GYA+ G G EAL+++ +M GI
Sbjct: 199 FNVMIVGYAKQG-----------------------------FG--LEALELYYKMVSDGI 227
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT--VICNALIEMYIKC------ 297
EPDE +++ +L C L + LG+ +H + ++ + + ++ NAL++MY KC
Sbjct: 228 EPDEYTLLGLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILRNALLDMYFKCKESGLA 287
Query: 298 -------------------------GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
G + A +FDQM +RD+VSW++++ + G
Sbjct: 288 KRAFDALKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQ 347
Query: 333 KAIH-LFHEMQRL-KVPPNDITFIGLLSACAHT-----GFWNEGLMYFDSMKRDHHIEHK 385
+A+ LF+EM + KV P+ +T + L+S A+ G W GLM ++ D +
Sbjct: 348 RAVRELFYEMLIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLMIRLQLEGDAFLS-- 405
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
L+D+ + G +++A + + K D +W S+++
Sbjct: 406 ----SALIDMYCKCGLIERAFMVFKTATEK-DVPLWTSMIT 441
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 276/506 (54%), Gaps = 15/506 (2%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMI 84
E L E +KIH +I+ + T +I++ G A +F ++K+ ++ +N MI
Sbjct: 221 EVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMI 280
Query: 85 RAYTNNHLYGLAINLYKQMLRD--PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
Y N + A+ LY+++ + RT K T ++ +C+ + + G+ +H+H
Sbjct: 281 GCYVLNGDFHEALELYQKLDMEGFKRT-------KATFVSILGACSSVKALAQGRLVHSH 333
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG---QM 199
+ + GL S AL+++Y KC L EA KVF M +RD VAW+ LI YA G
Sbjct: 334 ILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDA 393
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEPDEISIVSVLPA 258
+KAR +FD++ +SW AMI+ Y G A+ +FR+M G++PD ++ ++VL A
Sbjct: 394 RKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEA 453
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA LG L + +H ++ L V+ N LI MY +CG + +A +LF E+ VVSW
Sbjct: 454 CASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSW 513
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ ++ + +G+ +A+ LF EM V P+D+T+ +L C H G +G YF M
Sbjct: 514 TAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAE 573
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
H + +H+ +VDLLGR+GRL A ++E MP +PD W + L++CR + LE+
Sbjct: 574 LHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGE 633
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
A E + L+P T Y+ +SNIYA HG WE V+ +RK + + +KK PG S IEV+ ++
Sbjct: 634 AAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKL 693
Query: 499 QEFVSGDDTKPFLKDIFWLLELLALH 524
EF SG P +I EL LH
Sbjct: 694 HEFSSGGKYHPRTDEI--CEELTRLH 717
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/546 (23%), Positives = 235/546 (43%), Gaps = 120/546 (21%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
FV +L +C +L + ++IH ++ L L ++ + G + A +F+ ++ +
Sbjct: 113 FVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRD 172
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL- 135
+NA+I A++ + + A+ ++K+M D + P+ T VI +G P +
Sbjct: 173 ETSWNAVILAHSQSGDWSGALRIFKEMKCD------VKPNSTTYINVI---SGFSTPEVL 223
Query: 136 --GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G++IHA + G + + AL+++YGKC EA +VF++M RD+V+WN
Sbjct: 224 PEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWN------ 277
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
MI Y G + EAL++++++ M G + + + V
Sbjct: 278 -------------------------VMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFV 312
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L AC+ + +L G +H + + L + AL+ MY KCG + +A ++F+ M R
Sbjct: 313 SILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR 372
Query: 314 DVVSWSTVIGGLANHG------KAHK----------------------------AIHLFH 339
D V+WST+IG A++G KA K A+ +F
Sbjct: 373 DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFR 432
Query: 340 EMQ-RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
EM + P+ +TFI +L ACA G +E + + + +E + L+++ R
Sbjct: 433 EMTGAAGLKPDAVTFIAVLEACASLGRLSE-VKALHAQISESELESNVVVTNTLINMYAR 491
Query: 399 AGRLD-------------------------------QALNIIEEMPM---KPDAKIWGSL 424
G L+ +AL++ +EM + KPD + S+
Sbjct: 492 CGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSI 551
Query: 425 LSSCRTYSNLEIA---VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
L C +LE M L L P ++ + ++ + GR D ++L+ S
Sbjct: 552 LFVCTHGGSLEQGWRYFTDMAELHALAPT-ADHFAAMVDLLGRSGRLFDA---KELLESM 607
Query: 482 SMKKTP 487
+ P
Sbjct: 608 PFEPDP 613
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 208/457 (45%), Gaps = 51/457 (11%)
Query: 17 FVPIL---QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV- 72
F+ +L SC +++E + +H +I + + +I + L A +F+ +
Sbjct: 10 FLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMD 69
Query: 73 -KEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ NV +NAMI AY N A+ LY +M L+ T D T V+ +C+ L
Sbjct: 70 WRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGT------DHVTFVSVLGACSSL 123
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
+ G++IH V GL S NAL+ +Y
Sbjct: 124 ---AQGREIHNRVFYSGLDSFQSLANALVTMY---------------------------- 152
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
AR G + A+ +F + SW A+I ++ G ++ AL +F++M+ ++P+
Sbjct: 153 ---ARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDVKPNST 208
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ ++V+ + L G IH N V+ ALI MY KCG ++A ++FD+M
Sbjct: 209 TYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKM 268
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG- 369
+RD+VSW+ +IG +G H+A+ L+ ++ TF+ +L AC+ +G
Sbjct: 269 KKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGR 328
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
L++ ++R ++ ++ LV++ + G L++A + M + DA W +L+ +
Sbjct: 329 LVHSHILERG--LDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYA 385
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
+ + A A + L DT ++ + Y ++G
Sbjct: 386 SNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNG 422
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 158/363 (43%), Gaps = 56/363 (15%)
Query: 165 CDELIEAHKVFEEMT----DRDIVAWNNLISGYARLGQMKKARMLFDKMPYT--TIVSWT 218
C +++E + E + +RD + N LIS Y + + AR +F+ M + +VSW
Sbjct: 20 CGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWN 79
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
AMI+ Y G EAL ++ +M + G+ D ++ VSVL AC+ SL G IH +
Sbjct: 80 AMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYS 136
Query: 279 HLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLF 338
L + NAL+ MY + G + A ++F + RD SW+ VI + G A+ +F
Sbjct: 137 GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF 196
Query: 339 HEMQRLKVPPNDITFIGLLSACAHTGFWNEGL-----------------------MY--- 372
EM + V PN T+I ++S + EG MY
Sbjct: 197 KEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKC 255
Query: 373 ---------FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM---KPDAKI 420
FD MK+ + + GC V G +AL + +++ M K
Sbjct: 256 GSSHEAREVFDKMKKRDMVSWNV-MIGCYV----LNGDFHEALELYQKLDMEGFKRTKAT 310
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLV--LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
+ S+L +C + L + H+L L+ E L N+YAK G E+ ++ +
Sbjct: 311 FVSILGACSSVKALAQGRLVHSHILERGLDSE-VAVATALVNMYAKCGSLEEARKVFNAM 369
Query: 479 RSK 481
+++
Sbjct: 370 KNR 372
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 23/190 (12%)
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+PD ++ ++VL +C+ G + G +H + R T++ NALI MY KC + A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 306 LFDQM--VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-- 361
+F+ M +R+VVSW+ +I A +G + +A+ L+ M + + +TF+ +L AC+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 362 ------HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
H + GL F S+ LV + R G + A + + + +
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLAN------------ALVTMYARFGSVGDAKRMFQSLQTR 171
Query: 416 PDAKIWGSLL 425
D W +++
Sbjct: 172 -DETSWNAVI 180
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 19/252 (7%)
Query: 6 GALSIKELEDRFVPILQSCENL---IELKKIHTQILKYLLSQSNFLVTK-MIDVCNSGGD 61
GA +K F+ +L++C +L E+K +H QI + L +SN +VT +I++ G
Sbjct: 436 GAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL-ESNVVVTNTLINMYARCGS 494
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
L A LF KE V + AM+ A++ Y A++L+++M + + PD T
Sbjct: 495 LEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEG-----VKPDDVTYT 549
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKF-GLKSHSITENALLDLYGKCDELIEAHKVFEEMT- 179
++ C G + + + L + A++DL G+ L +A ++ E M
Sbjct: 550 SILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPF 609
Query: 180 DRDIVAWNNLIS-----GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
+ D VAW ++ G LG+ R +++ P +T + AM + Y G + +
Sbjct: 610 EPDPVAWMTFLTACRIHGKLELGEAAAER-VYELDPSST-APYIAMSNIYAAHGMWEKVA 667
Query: 235 DVFRQMQMVGIE 246
V ++M+ G++
Sbjct: 668 SVRKKMEERGLK 679
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 175/451 (38%), Positives = 269/451 (59%), Gaps = 38/451 (8%)
Query: 76 NVFLYNAMIRAYTNNHLYGL---AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ FL N +IRA+ + L A + MLR S +LP+KFT PF++K+CA L
Sbjct: 92 DAFLVNTLIRAHAASPLPSARLRAAAFFPLMLR-----SAVLPNKFTFPFLLKACAALPG 146
Query: 133 -PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
P +G Q HA KFG + N L+ +Y
Sbjct: 147 FPGVGLQAHAAALKFGFATDQYVSNTLIHMYS--------------------------CF 180
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G LG AR +FD+M +++V+W+AMI GY G ++A+ +FR+MQ G+ PDE++
Sbjct: 181 GGEFLGD---ARNVFDRMDKSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASGVRPDEVT 237
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
++ VL A A LG+LEL W+ + ++ + + +CNALI+ KCG ++ A +F M
Sbjct: 238 VIGVLAAAADLGALELARWVGRFVEREGIGKSVTLCNALIDALAKCGDVDGAVAVFQGME 297
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
ER VVSW++VI LA G+ +A+ +F M+ V P+D+ FIG+L+AC+H G +EG
Sbjct: 298 ERTVVSWTSVIDALAMEGRGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSHAGMVDEGYG 357
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
YFDSMK ++ I+ KIEHYGC+VD+ GRAG +++A+ I MPMKP+ IW +L+++CR +
Sbjct: 358 YFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEFIHTMPMKPNPIIWRTLVAACRAH 417
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
LE+ +LL P NYV+LSN+YA RW++ S +R+ + + +KK PGCSL
Sbjct: 418 GRLELGESITRNLLNEYPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSL 477
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+E++ EV EF++GD++ P K+I+ ++E +A
Sbjct: 478 VELDGEVHEFIAGDESHPQWKEIYMMVEEMA 508
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 154/363 (42%), Gaps = 51/363 (14%)
Query: 17 FVPILQSCENLIELKKI----HTQILKYLLSQSNFLVTKMIDV--CNSGGDLAYASLLFK 70
F +L++C L + H LK+ + ++ +I + C G L A +F
Sbjct: 134 FPFLLKACAALPGFPGVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGEFLGDARNVFD 193
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + +V ++AMI Y L A+ L+++M S + PD+ T+ V+ + A L
Sbjct: 194 RMDKSSVVTWSAMIGGYVRGGLSSDAVGLFREM-----QASGVRPDEVTVIGVLAAAADL 248
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
L + + V + G+ NAL+D KC ++ A VF+ M +R +V+W ++I
Sbjct: 249 GALELARWVGRFVEREGIGKSVTLCNALIDALAKCGDVDGAVAVFQGMEERTVVSWTSVI 308
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
A G+ K EA+ VF M+ G+ PD++
Sbjct: 309 DALAMEGRGK-------------------------------EAVAVFEAMKTAGVRPDDV 337
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLL----RRTVICNALIEMYIKCGCINQASQL 306
+ VL AC+ G ++ G + Y D + + +++M+ + G + +A +
Sbjct: 338 VFIGVLTACSHAGMVDEG---YGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEF 394
Query: 307 FDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
M ++ + + W T++ HG+ + + + P ++ ++ L + A T
Sbjct: 395 IHTMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLN-EYPAHEANYVMLSNVYALTQR 453
Query: 366 WNE 368
W E
Sbjct: 454 WKE 456
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 192/527 (36%), Positives = 288/527 (54%), Gaps = 53/527 (10%)
Query: 1 MAARIGALSIKELE-DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID---VC 56
MAARI I++L L + L + H ++ L+ F VT+++ +
Sbjct: 1 MAARI----IEQLHHPSLSQALTALTATSHLHQAHAHLIVSGLASHPFTVTRLLACAALS 56
Query: 57 NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPD 116
S DL +A +F P+ F++N +I A + ++ Y ML PD
Sbjct: 57 PSASDLPHAKTIFLHTHNPSPFMFNTIIMASSRTLD---SVTFYVCMLHAGH-----FPD 108
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
FT PF+IKS + LG Q+HAHV KFGL N ++ LY EL A KVF+
Sbjct: 109 NFTFPFLIKSSSASPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFD 168
Query: 177 E--------------------------------MTDRDIVAWNNLISGYARLGQMKKARM 204
E M ++ V+WN +ISGYA ++ +AR
Sbjct: 169 ESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARK 228
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE---PDEISIVSVLPACAQ 261
LFD+MP SW+AM+SGY+ +G EALD+F M+MV + P+E ++VS + ACAQ
Sbjct: 229 LFDEMPDRDAASWSAMVSGYSQLGMCNEALDLF--MEMVTGDKMIPNEAALVSAVSACAQ 286
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
L +LE G W+H Y + L + L++MY KCG I A+ +F+ M ER+V SW+++
Sbjct: 287 LRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSM 346
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I GLA +G +A+ LF +MQ + PN ITFI LL+ C+H+G EG F M + +
Sbjct: 347 IAGLALNGCGKEALALFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYG 406
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
I+ +++HYGC+VDLLGRAG + +AL+ +E+MPMKP +++WG+L+ +CR + +E+
Sbjct: 407 IKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELG 466
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
+ L+ LEP G Y LL NI+A RW+DV+ +R L + + + K PG
Sbjct: 467 KRLIDLEPHHGGRYALLCNIFAAAQRWDDVAMVRDLEKGRKVLKNPG 513
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/467 (38%), Positives = 273/467 (58%), Gaps = 14/467 (2%)
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
YA +F + P+ FL A++R HL + ++ R LP LPF
Sbjct: 95 YAVAVFSSLSPPDPFLAAALLRF---AHLTQPPLETFRVFSGLRRAHGRDLP---FLPFA 148
Query: 124 IKSCA--GLLCPSLGKQIHAHVCKF---GLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
A SL AH G H EN+L+ Y C ++ A KV +EM
Sbjct: 149 FSPLAKSAAAARSLPAAAGAHAVSLLLGGFDKHRFVENSLIGAYVACGDVGAARKVLDEM 208
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+D+++W ++++ Y+R M A +F P +V+WTAM++GY +AL+ F
Sbjct: 209 VVKDVISWTSIVAAYSRSRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFE 268
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
QM G+ DE+S+ + ACAQLG++ WI D++ L R V+ + L++MY KCG
Sbjct: 269 QMAGAGMPIDEVSLTGAISACAQLGAVRRAVWIQEIADRSGLGRNVVVGSGLVDMYAKCG 328
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLL 357
I++A ++F+ M E++V ++S++I GLA+HG+A+ AI LF++M +R V PN +TFIG+L
Sbjct: 329 LIDEACRVFEGMQEKNVYTYSSMIVGLASHGRANDAIALFNDMVRRADVEPNHVTFIGVL 388
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
+AC+H G EG YF MK + I +HY C+VDLLGRAG + +AL++++ M ++P
Sbjct: 389 TACSHAGMVKEGRYYFAQMKDRYGILPSADHYTCMVDLLGRAGLVIEALDLVKSMTVEPH 448
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
+WG+LL +CR + N ++A +A +HL LEPE GNYVLLSN A G W++VS++RKL
Sbjct: 449 GGVWGALLGACRIHGNTKVAKVAAQHLFKLEPEGIGNYVLLSNTLASAGEWDEVSKVRKL 508
Query: 478 IRSKSMKKTPGCSLIEVNNE-VQEFVSGDDTKPFLKDI-FWLLELLA 522
+R + +KK P S E + V +F +GD+T P++ +I LLEL A
Sbjct: 509 MRIRGLKKDPAVSSFEGRDGLVHQFFAGDNTHPWMHEIKKTLLELRA 555
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 53/342 (15%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T ++ + D+ A +F ++ + AM+ Y N + A+ ++QM
Sbjct: 217 TSIVAAYSRSRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQM-----A 271
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
G+ + D+ +L I +CA L I + GL + + + L+D+Y KC +
Sbjct: 272 GAGMPIDEVSLTGAISACAQLGAVRRAVWIQEIADRSGLGRNVVVGSGLVDMYAKCGLID 331
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
EA +VFE M ++++ ++++I G A G+ A LF+ M
Sbjct: 332 EACRVFEGMQEKNVYTYSSMIVGLASHGRANDAIALFNDM-------------------- 371
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE-WIHMYCDKNHLLRRTVICN 288
++ +EP+ ++ + VL AC+ G ++ G + D+ +L
Sbjct: 372 ----------VRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYT 421
Query: 289 ALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAH----KAIHLFHEMQR 343
++++ + G + +A L M VE W ++G HG A HLF
Sbjct: 422 CMVDLLGRAGLVIEALDLVKSMTVEPHGGVWGALLGACRIHGNTKVAKVAAQHLF----- 476
Query: 344 LKVPPNDI-TFIGLLSACAHTGFWNE-----GLMYFDSMKRD 379
K+ P I ++ L + A G W+E LM +K+D
Sbjct: 477 -KLEPEGIGNYVLLSNTLASAGEWDEVSKVRKLMRIRGLKKD 517
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 226/335 (67%)
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
A K+F +++ R++V +ISGY+R+G+++ AR++FD+M +V W+AMISGY
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
EAL++F +MQ+ GI+PD+++I+SV+ ACA+LG L+ +WIHMY DKN L + NAL
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNAL 121
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND 350
I+MY KCG + A +F++M R+V+SW+++I A HG A A+ F++M+ + PN
Sbjct: 122 IDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNG 181
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
+TF+G+L AC+H G EG F SM +H+I K EHYGC+VDL GRA L AL ++E
Sbjct: 182 VTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVE 241
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
MP+ P+ IWGSL+++C+ + E+ A + +L LEP+ G V LSNIYAK RW+D
Sbjct: 242 TMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQD 301
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
V +R L++ + + K GCS IE+NN+V EFV D
Sbjct: 302 VGELRNLMKQRGISKERGCSRIELNNQVYEFVMAD 336
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 151/338 (44%), Gaps = 42/338 (12%)
Query: 35 TQILKYLLSQSNFLV-TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLY 93
Q L +S N +V T MI + G + A L+F Q++E ++ ++AMI Y +
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 94 GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI 153
A+NL+ +M I PD+ T+ VI +CA L K IH +V K GL
Sbjct: 62 QEALNLFSEMQVFG-----IKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALP 116
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
NAL+D+Y KC L A VFE+M R++++W ++I+ +A
Sbjct: 117 VNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFA------------------- 157
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
H G + AL F QM+ I+P+ ++ V VL AC+ G +E G
Sbjct: 158 -----------IH-GDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTFA 205
Query: 274 YCDKNH-LLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKA 331
H + + +++++ + + A +L + M + +VV W +++ HG+
Sbjct: 206 SMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMAACQIHGE- 264
Query: 332 HKAIHLFHEMQRLKVPPN-DITFIGLLSACAHTGFWNE 368
+ F Q L++ P+ D + L + A W +
Sbjct: 265 -NELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQD 301
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 8 LSIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
IK + + ++ +C L L + IH + K L + + +ID+ G+L
Sbjct: 74 FGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGA 133
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A +F++++ NV + +MI A+ + A+ + QM +D I P+ T V+
Sbjct: 134 ARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQM-KDEN----IKPNGVTFVGVL 188
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITE-----NALLDLYGKCDELIEAHKVFEEMT 179
+C+ G++ A + H+IT ++DL+G+ + L +A ++ E M
Sbjct: 189 YACSHAGLVEEGRRTFASMT----NEHNITPKHEHYGCMVDLFGRANLLRDALELVETMP 244
Query: 180 -DRDIVAWNNL-----ISGYARLGQMKKARML 205
++V W +L I G LG+ ++L
Sbjct: 245 LAPNVVIWGSLMAACQIHGENELGEFAAKQVL 276
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 281/486 (57%), Gaps = 42/486 (8%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
E K++H I F+V ++++ L A LF ++ E NV + MI AY+
Sbjct: 73 EGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS 132
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
N L A+ M R+ + P+ FT V+++C GL P+L +Q+H + K GL
Sbjct: 133 NK-LNDKALKCLILMFREG-----VRPNMFTYSSVLRACDGL--PNL-RQLHCGIIKTGL 183
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+S +AL+D+Y K W++L A +FD+
Sbjct: 184 ESDVFVRSALIDVYSK---------------------WSDL----------DNALGVFDE 212
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
MP +V W ++I G+ EAL++F++M+ G D+ ++ SVL AC L LELG
Sbjct: 213 MPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELG 272
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+H++ K + ++ NALI+MY KCG + A+ F +MVE+DV+SWST++ GLA +
Sbjct: 273 RQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQN 330
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G + +A+ LF M+ PN IT +G+L AC+H G +G YF SMK+ ++ EH
Sbjct: 331 GYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREH 390
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
YGCL+DLLGRAGRLD+A+ +I EM +PD+ W +LL +CR + N+++A+ A + ++ LE
Sbjct: 391 YGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELE 450
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
PED G Y+LLSNIYA RWEDV+ +RK + ++ ++KTPGCS IEV+ ++ F+ GD +
Sbjct: 451 PEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSH 510
Query: 509 PFLKDI 514
P +++I
Sbjct: 511 PKIEEI 516
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 180/357 (50%), Gaps = 47/357 (13%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ +L++C+ L L+++H I+K L F+ + +IDV + DL A +F ++ +
Sbjct: 158 YSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRD 217
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ ++N++I + N A+NL+K+M R + L D+ TL V+++C GL LG
Sbjct: 218 LVVWNSIIGGFAQNSDGNEALNLFKRMKR-----AGFLADQATLTSVLRACTGLALLELG 272
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+Q+H HV KF I NAL+D+Y KC L +A+ F M ++D+++W+ +++G A+
Sbjct: 273 RQVHVHVLKF--DQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQ- 329
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+GY+ +AL++F M+ G P+ I+++ VL
Sbjct: 330 -------------------------NGYSR-----QALELFESMKESGSRPNYITVLGVL 359
Query: 257 PACAQLGSLELGEWIHMYCDKNHL----LRRTVICNALIEMYIKCGCINQASQLFDQM-V 311
AC+ G +E G W + K R C LI++ + G +++A +L +M
Sbjct: 360 FACSHAGLVEKG-WYYFRSMKKLFGVDPGREHYGC--LIDLLGRAGRLDEAVKLIHEMEC 416
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
E D V+W T++G H AI+ ++ L+ P + T+I L + A+T W +
Sbjct: 417 EPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELE-PEDAGTYILLSNIYANTQRWED 472
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
+ + H A+ M+ G+ D I+ ++ C+ G+++ G+ +H +
Sbjct: 27 FANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGY 86
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN--HGKAHKAIHLF 338
+ + N L+ MY+K + +A LFD+M ER+VVSW+T+I +N + KA K + L
Sbjct: 87 EPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLIL- 145
Query: 339 HEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
M R V PN T+ +L AC G N ++ +K +E + L+D+ +
Sbjct: 146 --MFREGVRPNMFTYSSVLRAC--DGLPNLRQLHCGIIKTG--LESDVFVRSALIDVYSK 199
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
LD AL + +EMP + D +W S++
Sbjct: 200 WSDLDNALGVFDEMPTR-DLVVWNSIIGG 227
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 185/459 (40%), Positives = 268/459 (58%), Gaps = 48/459 (10%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
+ + + PN F +N +I++Y+ + L+ AI LYK ++ + + PDK T PFV+K+
Sbjct: 37 ILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENE--LFPDKHTYPFVLKA 94
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
CA L GKQ+HAHV K G + LD Y
Sbjct: 95 CAYLFSLFEGKQVHAHVLKLGFE---------LDTY----------------------IC 123
Query: 187 NNLISGYARLGQMKKARMLFDKM-PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
N+LI YA G ++ AR +FD+M + +VSW MI Y +G Y L +F +M V
Sbjct: 124 NSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-Y 182
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMY----CDKNHLLRRTVICNALIEMYIKCGCIN 301
EPD ++ SV+ AC LGSL LG W+H + CDKN ++ ++ L++MY KCG +
Sbjct: 183 EPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKN-VVCDVLVNTCLVDMYCKCGSLE 241
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSAC 360
A Q+F+ M RDV SW+++I G A HGKA A+ F M ++ K+ PN ITF+G+LSAC
Sbjct: 242 IAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSAC 301
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
H+G +EGLMYF+ M +++++E + HYGCLVDL RAG + +ALN++ EMP+KPDA I
Sbjct: 302 NHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVI 361
Query: 421 WGSLLSSC-RTYSNLEIAVIAMEHLLVLEPEDT---GNYVLLSNIYAKHGRWEDVSRMRK 476
W SLL +C + ++++E++ + + E + G YVLLS +YA RW DV +RK
Sbjct: 362 WRSLLDACYKQHASVELSEEMAKQ--IFESNGSVCGGAYVLLSKVYASASRWNDVGLLRK 419
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
L+ K + K PGCSLIE+N EF +GD P KDI+
Sbjct: 420 LMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIY 458
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 171/384 (44%), Gaps = 62/384 (16%)
Query: 10 IKELEDRFVP-------ILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG 59
I E E+ P +L++C +L E K++H +LK ++ +I S
Sbjct: 74 ITEQENELFPDKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASC 133
Query: 60 GDLAYASLLFKQVKE-PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
G L A +F ++ E NV +N MI +Y Y + + ++ +M++ + PD +
Sbjct: 134 GYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMK------VYEPDCY 187
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHV---CKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
T+ VI++C GL SLG +HA V C + + L+D+Y KC L A +VF
Sbjct: 188 TMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVF 247
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
E M+ RD+ +WN++I G+A G+ K ALD
Sbjct: 248 EGMSYRDVSSWNSIILGFAVHGKAKA-------------------------------ALD 276
Query: 236 VF-RQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEM 293
F R +++ I P+ I+ V VL AC G ++ G + M + ++ V L+++
Sbjct: 277 YFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDL 336
Query: 294 YIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI- 351
Y + G I +A + +M ++ D V W +++ K H ++ L EM + N
Sbjct: 337 YARAGHIQEALNVVSEMPIKPDAVIWRSLLDACY---KQHASVELSEEMAKQIFESNGSV 393
Query: 352 ---TFIGLLSACAHTGFWNE-GLM 371
++ L A WN+ GL+
Sbjct: 394 CGGAYVLLSKVYASASRWNDVGLL 417
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 123/255 (48%), Gaps = 10/255 (3%)
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT-TIVSWTAMISGYTHIGSYAE-ALDV 236
T+ +I N+L++ + +K+ + +T +W +I Y+ + + A+ +
Sbjct: 10 TNTNIKHINHLLNQSNSISHVKQIHAQILRTIHTPNSFTWNILIQSYSKSTLHKQKAILL 69
Query: 237 FRQM---QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
++ + Q + PD+ + VL ACA L SL G+ +H + K T ICN+LI
Sbjct: 70 YKAIITEQENELFPDKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHF 129
Query: 294 YIKCGCINQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
Y CG + A ++FD+M E R+VVSW+ +I A G + +F EM ++ P+ T
Sbjct: 130 YASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-YEPDCYT 188
Query: 353 FIGLLSACAHTGFWNEGLMY--FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
++ AC G + G+ F K D ++ + CLVD+ + G L+ A + E
Sbjct: 189 MQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFE 248
Query: 411 EMPMKPDAKIWGSLL 425
M + D W S++
Sbjct: 249 GMSYR-DVSSWNSII 262
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 191/504 (37%), Positives = 290/504 (57%), Gaps = 53/504 (10%)
Query: 29 ELKKIHTQILKYLLSQ---SNFLVTKMIDVCNS--GGDLAYASLLFKQVKEPNVFLYNAM 83
+LK+IH Q L+ + S + FL T ++ +S +L YA+ +F PN F++N +
Sbjct: 37 QLKQIHAQTLRTVNSNHPNAIFLYTNILQHYSSLTQPNLTYATRVFHHFPNPNSFMWNTL 96
Query: 84 IRAY---TNNHLYGLAINLYKQMLR-DPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
IR Y TN + A+ LYK M+ + +T +PD T P V+K+CA GKQ+
Sbjct: 97 IRVYARSTNTNHKHKAMELYKTMMTMEEKTA---VPDNHTFPIVLKACAYTFSLCEGKQV 153
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
HAHV K G +S + N+L+ Y C G +
Sbjct: 154 HAHVLKHGFESDTYICNSLVHFYATC-------------------------------GCL 182
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
A +F KM VSW MI Y G + AL +F +MQ V +PD ++ SV+ AC
Sbjct: 183 DLAEKMFYKMSERNEVSWNIMIDSYAKGGIFDTALRMFGEMQRVH-DPDGYTMQSVISAC 241
Query: 260 AQLGSLELGEWIHMY----CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
A LG+L LG W+H Y CDKN ++ ++ L++MY K G + A Q+F+ M RD+
Sbjct: 242 AGLGALSLGLWVHAYILKKCDKN-MVDDVLVNTCLVDMYCKSGELEIAKQVFESMAFRDL 300
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+W+++I GLA HG+A A++ + M ++ K+ PN ITF+G+LSAC H G +EG+++FD
Sbjct: 301 NAWNSMILGLAMHGEAKAALNYYVRMVKVEKIVPNSITFVGVLSACNHRGMVDEGIVHFD 360
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS-CRTYSN 433
M +++++E ++EHYGCLVDL RAGR+++ALN++ EM +KPDA IW SLL + C+ Y++
Sbjct: 361 MMTKEYNVEPRLEHYGCLVDLFARAGRINEALNLVSEMSIKPDAVIWRSLLDACCKQYAS 420
Query: 434 LEIAVIAMEHLLVLEPE--DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
+E++ + + E +G YVLLS +YA RW DV +RKL+ K + K PGCS+
Sbjct: 421 VELSEEMAKQVFESEGSVCSSGVYVLLSKVYASACRWNDVGLLRKLMSEKGVTKEPGCSI 480
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIF 515
IE++ V EF +GD T P ++I+
Sbjct: 481 IEIDGVVHEFFAGDTTHPKSENIY 504
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 49/336 (14%)
Query: 17 FVPILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C +L E K++H +LK+ ++ ++ + G L A +F ++
Sbjct: 134 FPIVLKACAYTFSLCEGKQVHAHVLKHGFESDTYICNSLVHFYATCGCLDLAEKMFYKMS 193
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E N +N MI +Y ++ A+ ++ +M R + PD +T+ VI +CAGL
Sbjct: 194 ERNEVSWNIMIDSYAKGGIFDTALRMFGEMQR------VHDPDGYTMQSVISACAGLGAL 247
Query: 134 SLGKQIHAHV---CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
SLG +HA++ C + + L+D+Y K EL A +VFE M RD+ AWN++I
Sbjct: 248 SLGLWVHAYILKKCDKNMVDDVLVNTCLVDMYCKSGELEIAKQVFESMAFRDLNAWNSMI 307
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
G A G+ K A + R +++ I P+ I
Sbjct: 308 LGLAMHGEAKAALNYY------------------------------VRMVKVEKIVPNSI 337
Query: 251 SIVSVLPACAQLGSLELGEWIH--MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+ V VL AC G ++ G +H M + ++ R L++++ + G IN+A L
Sbjct: 338 TFVGVLSACNHRGMVDEG-IVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINEALNLVS 396
Query: 309 QM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+M ++ D V W +++ K + ++ L EM +
Sbjct: 397 EMSIKPDAVIWRSLLDACC---KQYASVELSEEMAK 429
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 301/570 (52%), Gaps = 71/570 (12%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTK----------------MIDVCNSG 59
+ V +C +L E +++ + K + NF+V++ M++ G
Sbjct: 1 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
AS LF ++ + +V +N+MI Y +N L + +YKQM+ I D T
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-----IDVDLAT 115
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ V+ CA SLGK +H+ K + N LLD+Y KC +L A +VFE+M
Sbjct: 116 IISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 175
Query: 180 DRDIVAWNNLISGYARLG----------QMKKARMLFDKMPYTTIVS------------- 216
+R++V+W ++I+GY R G QM+K + D + T+I+
Sbjct: 176 ERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 235
Query: 217 ----------------WTAMISGYTHIGSYAEALDVFRQM---------QMVG-IEPDEI 250
A++ Y GS A VF M MVG ++PD
Sbjct: 236 VHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSR 295
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++ +LPACA L +LE G+ IH Y +N + NAL+++Y+KCG + A LFD +
Sbjct: 296 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 355
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+D+VSW+ +I G HG ++AI F+EM+ + P++++FI +L AC+H+G +G
Sbjct: 356 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 415
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+F MK D +IE K+EHY C+VDLL R G L +A IE +P+ PDA IWG+LL CR
Sbjct: 416 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRI 475
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
Y ++E+A E + LEPE+TG YVLL+NIYA+ +WE+V RMR+ I K ++K PGCS
Sbjct: 476 YHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCS 535
Query: 491 LIEVNNEVQEFVSGDDTK-PFLKDIFWLLE 519
IE+ V FVSG+++ P K I LL+
Sbjct: 536 WIEIKGRVNLFVSGNNSSHPHSKKIESLLK 565
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 188/517 (36%), Positives = 274/517 (52%), Gaps = 68/517 (13%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+L YA LF ++EP + +N +I+ Y N AI L+ ++L D +PD FTL
Sbjct: 64 NLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCD------FVPDSFTL 117
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
P V+K CA L GKQIH V K G ++L+ +Y KC E+ KVF+ M D
Sbjct: 118 PCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMED 177
Query: 181 RDIVAWNNLISGYARLGQ-------------------------------MKKARMLFDKM 209
+D+V+WN+LI GYAR G+ ++ AR +FD+M
Sbjct: 178 KDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRM 237
Query: 210 PYTTIVSWTAMISGYTHIG-------------------------------SYAEALDVFR 238
P VSW AMI+GY G + +AL +F
Sbjct: 238 PIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFE 297
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
M I P+ +I+ + A + + SL G W+H Y K+ V+ LIEMY KCG
Sbjct: 298 VMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCG 357
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ A ++F + ++ + W++VI GL HG + + LF EM R + P+ ITFIG+L+
Sbjct: 358 SVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLN 417
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H GF + YF M D+ I+ IEHYGCL+D+L RAG L++A + IE MP+K +
Sbjct: 418 ACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANK 477
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
IW SLLS R + N+ + A +HL+ L P+ TG YV+LSN+YA G WE V ++R+++
Sbjct: 478 VIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMM 537
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
+ K MKK PGCS IE + EF+ GD + P ++I+
Sbjct: 538 KKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIY 574
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 139/319 (43%), Gaps = 39/319 (12%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI+ GD A LF Q+ E ++ +N+MI Y N + A+ L++ MLR+
Sbjct: 248 MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLRED---- 303
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
I P+ T+ + + +G++ G+ +H+++ K G K+ + L+++Y KC + A
Sbjct: 304 -ISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSA 362
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
+VF + + + W ++I G G +++ LFD+M T
Sbjct: 363 LRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRT------------------- 403
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNAL 290
G++P I+ + VL AC+ G E ++ ++ ++ L
Sbjct: 404 ------------GLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCL 451
Query: 291 IEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
I++ + G + +A ++M ++ + V W++++ G HG + + L P
Sbjct: 452 IDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDL-APDT 510
Query: 350 DITFIGLLSACAHTGFWNE 368
++ L + A G W +
Sbjct: 511 TGCYVILSNMYAAAGLWEK 529
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 183/537 (34%), Positives = 299/537 (55%), Gaps = 46/537 (8%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYA 65
L+ K E ++ +L+ C+++ E KK+H ILK L +F + ++ C + G + YA
Sbjct: 25 LNAKFNEQGWLSLLKRCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYA 84
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F+Q++EP F YN MIR N+ A+ LY +ML I PD FT PFV+K
Sbjct: 85 CSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERG-----IEPDNFTYPFVLK 139
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+C+ L+ G QIHAHV GL + D+
Sbjct: 140 ACSLLVALKEGVQIHAHVFNAGL-------------------------------EVDVFV 168
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
N LIS Y + G ++ A ++F++M ++ SW+++I + + + E L + M G
Sbjct: 169 QNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGR 228
Query: 246 EPDEISI-VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
E SI VS L AC LGS LG IH +N V+ +LI+MY+KCG + +
Sbjct: 229 HRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGL 288
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+F M ++ S++ +I GLA HG+ +A+ +F +M + P+D+ ++G+LSAC+H G
Sbjct: 289 CVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAG 348
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
EG F+ M+ +H I+ I+HYGC+VDL+GRAG L +A ++I+ MP+KP+ +W SL
Sbjct: 349 LVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSL 408
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LS+C+ + NLEI IA +++ L + G+Y++L+N+YA+ +W +V+R+R + K++
Sbjct: 409 LSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVEKNLV 468
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF-------WLLELLALHQDRAKDVIDI 534
+TPG SL+E N V +FVS D ++P + I+ W L+ D ++ ++D+
Sbjct: 469 QTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDV 525
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 289/522 (55%), Gaps = 47/522 (9%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQ--SNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
R + L SC + +LK++H Q ++ S + F + I +S DL YA +F Q++
Sbjct: 28 RLLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRYAFRVFHQIE 87
Query: 74 EPNVFLYNAMIRAYT-NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
PN F++NA+IRA + AI LY +ML GS ++ DK T PFV+K+CA L
Sbjct: 88 NPNSFMWNALIRACARSTDRKQHAIALYHRMLEQ---GS-VMQDKHTFPFVLKACAYLFA 143
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
S G+QIHA + K G D D+ N+L+
Sbjct: 144 LSEGEQIHAQILKLGF-------------------------------DSDVYINNSLVHF 172
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA ++ A+ +FD+M ++VSW +I + G + AL++F +MQ EPD +I
Sbjct: 173 YATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQKF-FEPDGYTI 231
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRT---VICNALIEMYIKCGCINQASQLFDQ 309
S+ ACA +GSL LG W H++ K R ++ +L++MY KCG + A QLF +
Sbjct: 232 QSIANACAGMGSLSLGMWAHVFLLKKFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHR 291
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHTGFWNE 368
M +RDV SW+++I G + HG+ A+ F M R K+ PN ITF+G+LSAC H G +E
Sbjct: 292 MPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSE 351
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G YFD M ++ I+ ++EHYGCLVDLL RAG +D+AL+++ MPM+PD IW SLL +C
Sbjct: 352 GRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDAC 411
Query: 429 RTYSNLEIAVIAMEHLLVLEPED---TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
N + + VLE E +G YVLLS +YA RW DV +RKL+ K + K
Sbjct: 412 -CKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVK 470
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
PGCS IE++ EF +GD + P ++I+ L+++ +R
Sbjct: 471 EPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVER 512
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 153/341 (44%), Gaps = 43/341 (12%)
Query: 9 SIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
S+ + + F +L++C L L ++IH QILK ++ ++ + L +A
Sbjct: 123 SVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFA 182
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F ++ E ++ +N +I A+ + A+NL+ +M + PD +T+ +
Sbjct: 183 KGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQK------FFEPDGYTIQSIAN 236
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CAG+ SLG + AHV F LK +A +V D++
Sbjct: 237 ACAGMGSLSLG--MWAHV--FLLKK------------------FDADRV------NDVLL 268
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVG 244
+L+ Y + G ++ A LF +MP + SW +MI G++ G A AL+ F M +
Sbjct: 269 NTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEK 328
Query: 245 IEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
+ P+ I+ V VL AC G + G + + + + L+++ + G I++A
Sbjct: 329 LMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEA 388
Query: 304 SQLFDQMVER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+ M R D+V W +++ K + + L EM R
Sbjct: 389 LDVVSNMPMRPDLVIWRSLLDACC---KQNAGVELSEEMAR 426
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 175/461 (37%), Positives = 267/461 (57%), Gaps = 15/461 (3%)
Query: 42 LSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYK 101
+S++ T MI G+L A + F ++ E +V +NAM+ Y I L+
Sbjct: 124 ISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFN 183
Query: 102 QMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC-KFGLKSHSITENALLD 160
ML + PD+ T VI SC+ L P L + I + K G + + + ALLD
Sbjct: 184 DMLSPGN----VQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLD 239
Query: 161 LYGKCDELIEAHKVFEEM---TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
++ KC L AHK+FE++ R V WN +IS YAR+G + A+ LFDKMP VSW
Sbjct: 240 MHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSW 299
Query: 218 TAMISGYTHIGSYAEALDVFRQM--QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
+MI+GYT G +A+ +F +M +PDE+++VSV AC LG L LG W
Sbjct: 300 NSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSIL 359
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
NH+ + N+LI MY +CG + A +F +M RD+VS++T+I G A HG ++I
Sbjct: 360 KVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESI 419
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
L +M+ + P+ IT+I +L+AC+H G +EG F+S+K ++HY C++D+
Sbjct: 420 ELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFP-----DVDHYACMIDM 474
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGRAGRL++A+ +I+ MPM+P A I+GSLL++ + +E+ +A L +EP ++GNY
Sbjct: 475 LGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNY 534
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
LLSNIYA GRW++ ++R +R + +KKT G S +E N+
Sbjct: 535 ALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHNS 575
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 151/302 (50%), Gaps = 43/302 (14%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTD----RDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
N ++ Y KC EA +F M D R+++ W +I+G+A+ G +K ARM FDKMP
Sbjct: 97 NVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPE 156
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSLELGEW 270
++VSW AM+SGY G+ E + +F M G ++PDE + +V+ +C+ LG L E
Sbjct: 157 RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSES 216
Query: 271 IHMYCD-----------KNHLL------------------------RRTVICNALIEMYI 295
I D K LL R +V NA+I Y
Sbjct: 217 IVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYA 276
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITF 353
+ G + A LFD+M +RD VSW+++I G +G++ KAI LF EM P+++T
Sbjct: 277 RVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTM 336
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
+ + SAC H G G + S+ + +HI+ I Y L+++ R G + A+ I +EM
Sbjct: 337 VSVFSACGHLGELGLG-NWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMA 395
Query: 414 MK 415
+
Sbjct: 396 TR 397
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 49/354 (13%)
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
+K ++ + ++ G L AH V + DRD N ++ YA+ G ++ AR LFD
Sbjct: 28 IKPNASFYSVMMKSAGSESMLFLAH-VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFD 86
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
+MP T+ W MISGY G+ EA +F M EIS
Sbjct: 87 EMPDRTVADWNVMISGYWKCGNEEEASTLFHVMG-----DQEIS---------------- 125
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
R + +I + K G + A FD+M ER VVSW+ ++ G A
Sbjct: 126 --------------RNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQ 171
Query: 328 HGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
G + I LF++M V P++ T+ ++S+C+ G + L K D + +
Sbjct: 172 GGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLG--DPCLSESIVRKLDDKVGFRP 229
Query: 387 EHY--GCLVDLLGRAGRLDQALNIIEEMPMKP--DAKIWGSLLSSCRTYSNLEIAVIAME 442
++ L+D+ + G L+ A I E++ + + W +++S+ +L A +
Sbjct: 230 NYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSA----K 285
Query: 443 HLLVLEPE-DTGNYVLLSNIYAKHGR-WEDVSRMRKLIRSKSMKKTPGCSLIEV 494
HL P+ DT ++ + Y ++G ++ + ++I S+ +K +++ V
Sbjct: 286 HLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSV 339
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 16/217 (7%)
Query: 220 MISGYTHIGSYAEA-LDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
M+ Y+ IG +++ + +F+ M Q I+P+ ++ + L L + D+
Sbjct: 1 MLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAHVLKSGYDR 60
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+H +R N ++ +Y K G I A +LFD+M +R V W+ +I G G +A L
Sbjct: 61 DHYVR-----NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTL 115
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
FH M ++ N IT+ +++ A G MYFD M E + + ++
Sbjct: 116 FHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMP-----ERSVVSWNAMLSGYA 170
Query: 398 RAGRLDQALNIIEEM----PMKPDAKIWGSLLSSCRT 430
+ G ++ + + +M ++PD W +++SSC +
Sbjct: 171 QGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSS 207
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 277/467 (59%), Gaps = 7/467 (1%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
M+ + G + A +F+ + E ++ +N +I Y N L G+A+ + +ML + S
Sbjct: 419 MVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRML----SAS 474
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
+ PD FT+ V+ +CA L +GKQ+H+++ + G+ S NAL+ Y K + A
Sbjct: 475 SMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETA 534
Query: 172 HKVFEE--MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
++ ++ + D +++++ L+ GY +LG K+AR +FD M +++WTAMI GY G
Sbjct: 535 RRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQ 594
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
EA+++FR M ++G EP+ ++ +VL ACA L L+ G+ IH ++ + + NA
Sbjct: 595 NDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNA 654
Query: 290 LIEMYIKCGCINQASQLFDQMVER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
+I +Y + G + A ++FDQ+ R + ++W+++I +A HG +A+ LF EM R+ V P
Sbjct: 655 IITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKP 714
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ IT++G+LSACAH GF ++G Y++ M+ +H I ++ HY C+VDL RAG L +A
Sbjct: 715 DHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEF 774
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I+ MP+ PD +WGSLL++CR N ++A +A LL ++P ++G Y L+N+Y+ GRW
Sbjct: 775 IQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRW 834
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
D +R+ KL + K +KK G S V +V F + D P I+
Sbjct: 835 NDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIY 881
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 202/442 (45%), Gaps = 52/442 (11%)
Query: 44 QSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM 103
++ F ++ + G L A ++F ++ + + + MI + + A+ + M
Sbjct: 279 RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338
Query: 104 LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
+ + P +FTL V+ SCA + +G+++H V K GL S N++L +YG
Sbjct: 339 VSEG-----FAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYG 393
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
KC + A VFE M R + +WN ++S Y G+M+ A +F+ M +IVSW +I+G
Sbjct: 394 KCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAG 453
Query: 224 YTHIGSYAEALDVF-RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
Y G AL F R + +EPD ++ SVL ACA L L++G+ +H Y + +
Sbjct: 454 YNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPC 513
Query: 283 RTVICNALIEMYIKCGCI---------------------------------NQASQLFDQ 309
+ I NALI Y K G + QA ++FD
Sbjct: 514 SSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDI 573
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M RDV++W+ +I G +G+ +A+ LF M + PN T +LSACA
Sbjct: 574 MNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACA-------S 626
Query: 370 LMYFDSMKRDHHI------EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
L Y D K+ H E + ++ + R+G + A + +++ + + W S
Sbjct: 627 LAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTS 686
Query: 424 LLSSCRTYSNLEIAVIAMEHLL 445
++ + + E AV+ E ++
Sbjct: 687 MIVAMAQHGLGEQAVVLFEEMV 708
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 38/274 (13%)
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE----LIEAHKVFEEM--TD 180
C + PS G+ IHAH K GL + N LL Y EA +F+++
Sbjct: 219 CRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYAR 278
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
R+ WN+L+S YA+ G++ A ++F +MP VSWT MI G G + +A+ F M
Sbjct: 279 RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
G P + ++ +VL +CA + + +G +H + K L + N+++ MY KCG
Sbjct: 339 VSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDA 398
Query: 301 NQAS-------------------------------QLFDQMVERDVVSWSTVIGGLANHG 329
A +F+ MVER +VSW+T+I G +G
Sbjct: 399 ETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNG 458
Query: 330 KAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAH 362
A+ F M + P+ T +LSACA+
Sbjct: 459 LDGMALKFFSRMLSASSMEPDAFTVTSVLSACAN 492
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 273/474 (57%), Gaps = 45/474 (9%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T MI G L A +LF ++ NV + MI Y N +A L++
Sbjct: 257 TNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFE-------- 308
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
++P+K + ++ A+L Y C L
Sbjct: 309 ---VMPEK---------------------------------NEVSWTAMLKGYTNCGRLD 332
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
EA ++F M + +VA N +I + + G++ KAR +FD+M +W+AMI Y G
Sbjct: 333 EASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGL 392
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+AL++FR MQ GI P+ S++SVL CA L +L+ G IH ++ + +
Sbjct: 393 ELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASV 452
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
L+ MYIKCG + +A Q+FD+ +DVV W+++I G A HG +A+ +FH+M + P+
Sbjct: 453 LLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPD 512
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
D+TF+G+LSAC++TG +GL F+SM+ + +E KIEHY C+VDLLGRAG+L++A+++I
Sbjct: 513 DVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLI 572
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
E+MPM+ DA IWG+LL +CRT+ L++A +A + LLVLEP++ G ++LLSNIYA GRW+
Sbjct: 573 EKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWD 632
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK-PFLKDIFWLLELLA 522
DV+ +R+ +R + + K PGCS I V +V +F GD + P +I +LE L+
Sbjct: 633 DVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLS 686
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 187/419 (44%), Gaps = 66/419 (15%)
Query: 46 NFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR 105
N LV+ I+ G + A +F ++ E NV + AM+R Y + A L+ QM
Sbjct: 164 NGLVSGYIN----NGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM-- 217
Query: 106 DPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
P+K + + + GLL G+
Sbjct: 218 ---------PEKNVVSWTV-MLGGLLQE-----------------------------GRI 238
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
D EA ++F+ M ++D+V N+I GY ++G++ +ARMLFD+MP +VSWT MI+GY
Sbjct: 239 D---EACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYV 295
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
+ +D+ R++ V E +E+S ++L G L+ + ++ V
Sbjct: 296 Q----NQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELF----NAMPIKSVV 347
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
CNA+I + + G + +A Q+FDQM E+D +WS +I G A+ LF MQR
Sbjct: 348 ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREG 407
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
+ PN + I +LS CA + G + R + + L+ + + G L +A
Sbjct: 408 IRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS-QFDLDVYVASVLLSMYIKCGNLAKA 466
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME-----HLLVLEPEDTGNYVLLS 459
+ + +K D +W S+++ Y+ + V A+ H + P+D +LS
Sbjct: 467 KQVFDRFAVK-DVVMWNSIITG---YAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLS 521
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%), Gaps = 23/299 (7%)
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
I+ N+++ Y + EA +F++M++R+ ++WN L+SGY G + +AR +FD+MP
Sbjct: 130 ISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPER 189
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL-ELGEWI 271
+VSWTAM+ GY G +EA +F QM E + +S +L Q G + E
Sbjct: 190 NVVSWTAMVRGYVKEGMISEAETLFWQMP----EKNVVSWTVMLGGLLQEGRIDEACRLF 245
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
M +K+ + R +I Y + G + +A LFD+M R+VVSW+T+I G + +
Sbjct: 246 DMMPEKDVVTRTNMIGG-----YCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQV 300
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
A LF M N++++ +L + G +E F++M +
Sbjct: 301 DIARKLFEVMPE----KNEVSWTAMLKGYTNCGRLDEASELFNAMPI-----KSVVACNA 351
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
++ G+ G + +A + ++M K D W +++ + Y + + A+E +++ E
Sbjct: 352 MILCFGQNGEVPKARQVFDQMREK-DEGTWSAMI---KVYERKGLELDALELFRMMQRE 406
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 137/290 (47%), Gaps = 54/290 (18%)
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
+F + I+ N+L+ Y + ++ +A VF+EM D++I++WN++++GY + + ++A+
Sbjct: 91 RFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQN 150
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+FDKM +SW ++SGY + G EA +VF +M P+
Sbjct: 151 MFDKMSERNTISWNGLVSGYINNGMINEAREVFDRM------PE---------------- 188
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
R V A++ Y+K G I++A LF QM E++VVSW+ ++GG
Sbjct: 189 -----------------RNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGG 231
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPND-ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
L G+ +A LF M P D +T ++ G E M FD M R
Sbjct: 232 LLQEGRIDEACRLFDMM-----PEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPR----- 281
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ + ++ + ++D A + E MP K + W ++L + Y+N
Sbjct: 282 RNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVS-WTAML---KGYTN 327
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 155/332 (46%), Gaps = 46/332 (13%)
Query: 46 NFLVTKMIDVCNS-------GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAIN 98
N + K + CN+ G++ A +F Q++E + ++AMI+ Y L A+
Sbjct: 339 NAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALE 398
Query: 99 LYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENAL 158
L++ M R+ I P+ +L V+ CAGL G++IHA + + + L
Sbjct: 399 LFRMMQREG-----IRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVL 453
Query: 159 LDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWT 218
L +Y KC L +A +VF+ +D+V WN++I+GYA+ G
Sbjct: 454 LSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHG--------------------- 492
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
+G EAL VF M GI PD+++ V VL AC+ G+++ G I +
Sbjct: 493 --------LG--VEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETK 542
Query: 279 HLLRRTVICNA-LIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIH 336
+ + + + A ++++ + G +N+A L ++M +E D + W ++G H K A
Sbjct: 543 YQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEV 602
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
++ L+ P N FI L + A G W++
Sbjct: 603 AAKKLLVLE-PKNAGPFILLSNIYASQGRWDD 633
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L C L L ++IH Q+++ ++ + ++ + G+LA A +F +
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA 474
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V ++N++I Y + L A+ ++ M S I+PD T V+ +C+
Sbjct: 475 VKDVVMWNSIITGYAQHGLGVEALRVFHDM-----HFSGIMPDDVTFVGVLSACSYTGNV 529
Query: 134 SLGKQI-HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
G +I ++ K+ ++ ++DL G+ +L EA + E+M + D + W L+
Sbjct: 530 KKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLG 589
Query: 192 G 192
Sbjct: 590 A 590
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 273/474 (57%), Gaps = 45/474 (9%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T MI G L A +LF ++ NV + MI Y N +A L++
Sbjct: 257 TNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFE-------- 308
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
++P+K + ++ A+L Y C L
Sbjct: 309 ---VMPEK---------------------------------NEVSWTAMLKGYTNCGRLD 332
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
EA ++F M + +VA N +I + + G++ KAR +FD+M +W+AMI Y G
Sbjct: 333 EASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGL 392
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+AL++FR MQ GI P+ S++SVL CA L +L+ G IH ++ + +
Sbjct: 393 ELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASV 452
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
L+ MYIKCG + +A Q+FD+ +DVV W+++I G A HG +A+ +FH+M + P+
Sbjct: 453 LLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPD 512
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
D+TF+G+LSAC++TG +GL F+SM+ + +E KIEHY C+VDLLGRAG+L++A+++I
Sbjct: 513 DVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLI 572
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
E+MPM+ DA IWG+LL +CRT+ L++A +A + LLVLEP++ G ++LLSNIYA GRW+
Sbjct: 573 EKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWD 632
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK-PFLKDIFWLLELLA 522
DV+ +R+ +R + + K PGCS I V +V +F GD + P +I +LE L+
Sbjct: 633 DVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLS 686
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 187/419 (44%), Gaps = 66/419 (15%)
Query: 46 NFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR 105
N LV+ I+ G + A +F ++ E NV + AM+R Y + A L+ QM
Sbjct: 164 NGLVSGYIN----NGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM-- 217
Query: 106 DPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
P+K + + + GLL G+
Sbjct: 218 ---------PEKNVVSWTV-MLGGLLQE-----------------------------GRI 238
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
D EA ++F+ M ++D+V N+I GY ++G++ +ARMLFD+MP +VSWT MI+GY
Sbjct: 239 D---EACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYV 295
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
+ +D+ R++ V E +E+S ++L G L+ + ++ V
Sbjct: 296 Q----NQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELF----NAMPIKSVV 347
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
CNA+I + + G + +A Q+FDQM E+D +WS +I G A+ LF MQR
Sbjct: 348 ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREG 407
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
+ PN + I +LS CA + G + R + + L+ + + G L +A
Sbjct: 408 IRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS-QFDLDVYVASVLLSMYIKCGNLAKA 466
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME-----HLLVLEPEDTGNYVLLS 459
+ + +K D +W S+++ Y+ + V A+ H + P+D +LS
Sbjct: 467 KQVFDRFAVK-DVVMWNSIITG---YAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLS 521
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%), Gaps = 23/299 (7%)
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
I+ N+++ Y + EA +F++M++R+ ++WN L+SGY G + +AR +FD+MP
Sbjct: 130 ISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPER 189
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL-ELGEWI 271
+VSWTAM+ GY G +EA +F QM E + +S +L Q G + E
Sbjct: 190 NVVSWTAMVRGYVKEGMISEAETLFWQMP----EKNVVSWTVMLGGLLQEGRIDEACRLF 245
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
M +K+ + R +I Y + G + +A LFD+M R+VVSW+T+I G + +
Sbjct: 246 DMMPEKDVVTRTNMIGG-----YCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQV 300
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
A LF M N++++ +L + G +E F++M +
Sbjct: 301 DIARKLFEVMPE----KNEVSWTAMLKGYTNCGRLDEASELFNAMPI-----KSVVACNA 351
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
++ G+ G + +A + ++M K D W +++ + Y + + A+E +++ E
Sbjct: 352 MILCFGQNGEVPKARQVFDQMREK-DEGTWSAMI---KVYERKGLELDALELFRMMQRE 406
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 137/290 (47%), Gaps = 54/290 (18%)
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
+F + I+ N+L+ Y + ++ +A VF+EM D++I++WN++++GY + + ++A+
Sbjct: 91 RFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQN 150
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+FDKM +SW ++SGY + G EA +VF +M P+
Sbjct: 151 MFDKMSERNTISWNGLVSGYINNGMINEAREVFDRM------PE---------------- 188
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
R V A++ Y+K G I++A LF QM E++VVSW+ ++GG
Sbjct: 189 -----------------RNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGG 231
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPND-ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
L G+ +A LF M P D +T ++ G E M FD M R
Sbjct: 232 LLQEGRIDEACRLFDMM-----PEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPR----- 281
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ + ++ + ++D A + E MP K + W ++L + Y+N
Sbjct: 282 RNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVS-WTAML---KGYTN 327
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 155/332 (46%), Gaps = 46/332 (13%)
Query: 46 NFLVTKMIDVCNS-------GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAIN 98
N + K + CN+ G++ A +F Q++E + ++AMI+ Y L A+
Sbjct: 339 NAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALE 398
Query: 99 LYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENAL 158
L++ M R+ I P+ +L V+ CAGL G++IHA + + + L
Sbjct: 399 LFRMMQREG-----IRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVL 453
Query: 159 LDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWT 218
L +Y KC L +A +VF+ +D+V WN++I+GYA+ G
Sbjct: 454 LSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHG--------------------- 492
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
+G EAL VF M GI PD+++ V VL AC+ G+++ G I +
Sbjct: 493 --------LG--VEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETK 542
Query: 279 HLLRRTVICNA-LIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIH 336
+ + + + A ++++ + G +N+A L ++M +E D + W ++G H K A
Sbjct: 543 YQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEV 602
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
++ L+ P N FI L + A G W++
Sbjct: 603 AAKKLLVLE-PKNAGPFILLSNIYASQGRWDD 633
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L C L L ++IH Q+++ ++ + ++ + G+LA A +F +
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA 474
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V ++N++I Y + L A+ ++ M S I+PD T V+ +C+
Sbjct: 475 VKDVVMWNSIITGYAQHGLGVEALRVFHDM-----HFSGIMPDDVTFVGVLSACSYTGNV 529
Query: 134 SLGKQI-HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
G +I ++ K+ ++ ++DL G+ +L EA + E+M + D + W L+
Sbjct: 530 KKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLG 589
Query: 192 G 192
Sbjct: 590 A 590
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 275/506 (54%), Gaps = 15/506 (2%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMI 84
E L E +KIH +I+ + T +I++ G A +F ++K+ ++ +N MI
Sbjct: 221 EVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMI 280
Query: 85 RAYTNNHLYGLAINLYKQMLRD--PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
Y N + A+ LY+++ + RT K T ++ +C+ + + G+ +H+H
Sbjct: 281 GCYVQNGDFHEALELYQKLDMEGFKRT-------KATFVSILGACSSVKALAQGRLVHSH 333
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG---QM 199
+ + GL S AL+++Y KC L EA KVF M +RD VAW+ LI YA G
Sbjct: 334 ILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDA 393
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEPDEISIVSVLPA 258
+KAR +FD++ + W AMI+ Y G A+ +FR+M G++PD ++ ++VL A
Sbjct: 394 RKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEA 453
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA LG L + +H ++ L V+ N LI MY +CG + +A +LF E+ VVSW
Sbjct: 454 CASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSW 513
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ ++ + +G+ +A+ LF EM V P+D+T+ +L C H G +G YF M
Sbjct: 514 TAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAE 573
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
H + +H+ +VDLLGR+GRL A ++E MP +PD W + L++CR + LE+
Sbjct: 574 LHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGE 633
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
A E + L+P T Y+ +SNIYA HG WE V+ +RK + + +KK PG S IEV+ ++
Sbjct: 634 AAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKL 693
Query: 499 QEFVSGDDTKPFLKDIFWLLELLALH 524
EF SG P +I EL LH
Sbjct: 694 HEFSSGGKYHPRTDEI--CEELTRLH 717
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 216/475 (45%), Gaps = 82/475 (17%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
FV +L +C +L + ++IH ++ L L ++ + G + A +F+ ++ +
Sbjct: 113 FVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRD 172
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL- 135
+NA+I A++ + + A+ ++K+M D + P+ T VI +G P +
Sbjct: 173 ETSWNAVILAHSQSGDWSGALRIFKEMKCDMK------PNSTTYINVI---SGFSTPEVL 223
Query: 136 --GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G++IHA + G S + AL+++YGKC EA +VF++M RD+V+WN
Sbjct: 224 PEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWN------ 277
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
MI Y G + EAL++++++ M G + + + V
Sbjct: 278 -------------------------VMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFV 312
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L AC+ + +L G +H + + L + AL+ MY KCG + +A ++F+ M R
Sbjct: 313 SILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR 372
Query: 314 DVVSWSTVIGGLANHG------KAHK----------------------------AIHLFH 339
D V+WST+IG A++G KA K A+ +F
Sbjct: 373 DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFR 432
Query: 340 EMQ-RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
EM + P+ +TFI +L ACA G +E + + + +E + L+++ R
Sbjct: 433 EMTGAAGLKPDAVTFIAVLEACASLGRLSE-VKALHAQISESELESNVVVTNTLINMYAR 491
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPED 451
G L++A + K W +++++ Y A+ + + + ++P+D
Sbjct: 492 CGSLEEAERLFAAAKEKTVVS-WTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDD 545
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 206/457 (45%), Gaps = 51/457 (11%)
Query: 17 FVPIL---QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV- 72
F+ +L SC ++ E + +H +I + + +I + L A +F+ +
Sbjct: 10 FLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMD 69
Query: 73 -KEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ NV +NAMI AY N A+ LY +M L+ T D T V+ +C+ L
Sbjct: 70 WRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGT------DHVTFVSVLGACSSL 123
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
+ G++IH V GL S NAL+ +Y
Sbjct: 124 ---AQGREIHNRVFYSGLDSFQSLANALVTMY---------------------------- 152
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
AR G + A+ +F + SW A+I ++ G ++ AL +F++M+ ++P+
Sbjct: 153 ---ARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDMKPNST 208
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ ++V+ + L G IH N V+ ALI MY KCG ++A ++FD+M
Sbjct: 209 TYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKM 268
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG- 369
+RD+VSW+ +IG +G H+A+ L+ ++ TF+ +L AC+ +G
Sbjct: 269 KKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGR 328
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
L++ ++R ++ ++ LV++ + G L++A + M + DA W +L+ +
Sbjct: 329 LVHSHILERG--LDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYA 385
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
+ + A A + L DT + + Y ++G
Sbjct: 386 SNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNG 422
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 23/190 (12%)
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+PD ++ ++VL +C+ G + G +H + R T++ NALI MY KC + A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 306 LFDQM--VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-- 361
+F+ M +R+VVSW+ +I A +G + +A+ L+ M + + +TF+ +L AC+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 362 ------HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
H + GL F S+ LV + R G + A + + + +
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLAN------------ALVTMYARFGSVGDAKRMFQSLQTR 171
Query: 416 PDAKIWGSLL 425
D W +++
Sbjct: 172 -DETSWNAVI 180
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 19/252 (7%)
Query: 6 GALSIKELEDRFVPILQSCENL---IELKKIHTQILKYLLSQSNFLVTK-MIDVCNSGGD 61
GA +K F+ +L++C +L E+K +H QI + L +SN +VT +I++ G
Sbjct: 436 GAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL-ESNVVVTNTLINMYARCGS 494
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
L A LF KE V + AM+ A++ Y A++L+++M + + PD T
Sbjct: 495 LEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEG-----VKPDDVTYT 549
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKF-GLKSHSITENALLDLYGKCDELIEAHKVFEEMT- 179
++ C G + + + GL + A++DL G+ L +A ++ E M
Sbjct: 550 SILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPF 609
Query: 180 DRDIVAWNNLIS-----GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
+ D VAW ++ G LG+ R +++ P +T + AM + Y G + +
Sbjct: 610 EPDPVAWMTFLTACRIHGKLELGEAAAER-VYELDPSST-APYIAMSNIYAAHGMWEKVA 667
Query: 235 DVFRQMQMVGIE 246
V ++M+ G++
Sbjct: 668 SVRKKMEERGLK 679
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 283/496 (57%), Gaps = 5/496 (1%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H Q K + + ++++ + G + A +F + E + +N+MI Y+
Sbjct: 156 VHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGR 215
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
A+ ++++M G + PD FTL ++ LG+ +H H+ G++ S
Sbjct: 216 SEEAVLMFREM---QEVG--LEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDS 270
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
I NAL+D+Y KC L A VF++M D+D+V+W +I+ YA G + A F++MP
Sbjct: 271 IVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGK 330
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
+VSW ++I + G YAEA+D+F +M G+ ++ ++V++L +C+ +G L LG+ H
Sbjct: 331 NVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAH 390
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
Y N++ +CNA+I+MY KCG + A +F M E++ VSW+ +IG LA HG
Sbjct: 391 SYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGK 450
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+AI +F +MQ V P++ITF GLLSAC+H+G + G YF+ M I +EHY C+
Sbjct: 451 EAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACM 510
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VDLLGR G L +A+++I++MP+KPD +W +LL +CRTY NL I M+ LL L ++
Sbjct: 511 VDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNS 570
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLK 512
G YVLLSN+Y++ RW+D+ + K++ +KK S IE++ +F+ D
Sbjct: 571 GLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGAST 630
Query: 513 DIFWLLELLALHQDRA 528
I+ +L L H A
Sbjct: 631 SIYSMLGQLMDHLKSA 646
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 229/439 (52%), Gaps = 69/439 (15%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
++ C +L +LK +H QI+ + L+ + K++ DL YA LF Q+ +PN F+
Sbjct: 42 LIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFM 101
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +I+ Y+N+ ++ LY++M+ D ILP++FT+PFV+K+CA C LG +
Sbjct: 102 FNHLIKGYSNSSDPIKSLLLYRRMVCDG-----ILPNQFTIPFVLKACAAKSCYWLGVCV 156
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
HA K G+ SH+ +NA+L++Y C + A +VF+++++R +V+WN++I+GY+++G+
Sbjct: 157 HAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRS 216
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
+ EA+ +FR+MQ VG+EPD ++V +L
Sbjct: 217 E-------------------------------EAVLMFREMQEVGLEPDVFTLVGLLSVS 245
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
+ G+ +LG ++H++ + +++ NAL++MY KCG + A +FDQM+++DVVSW+
Sbjct: 246 TKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWT 305
Query: 320 TVIGGLANHGKAH-------------------------------KAIHLFHEMQRLKVPP 348
+I ANHG +A+ LF+ M V
Sbjct: 306 CMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMA 365
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
ND T + +LS+C+H G G S D++I ++D+ + G L A+++
Sbjct: 366 NDTTLVAILSSCSHMGDLALGKQA-HSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDV 424
Query: 409 IEEMPMKPDAKIWGSLLSS 427
MP K +A W ++ +
Sbjct: 425 FFGMPEK-NAVSWNVIIGA 442
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 137/261 (52%), Gaps = 7/261 (2%)
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
++ L+S +L ++ A LFD++P + +I GY++ ++L ++R+M
Sbjct: 68 VLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVC 127
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
GI P++ +I VL ACA LG +H K + + NA++ +Y+ CG I
Sbjct: 128 DGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITS 187
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
A ++FD + ER +VSW+++I G + G++ +A+ +F EMQ + + P+ T +GLLS
Sbjct: 188 ARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTK 247
Query: 363 TGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
G ++ G ++ + I+ + + L+D+ + G L A ++ ++M + D W
Sbjct: 248 HGNFDLGRFVHLHMVVTGIEIDSIVTN--ALMDMYAKCGNLKCAKSVFDQM-LDKDVVSW 304
Query: 422 GSLLSSCRTYSNLEIAVIAME 442
++++ Y+N + A+E
Sbjct: 305 TCMINA---YANHGLIDCALE 322
>gi|297745510|emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 184/506 (36%), Positives = 279/506 (55%), Gaps = 54/506 (10%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
LK+I L+ + + L+ ++ + + + YA LF + +P VFLYN +I+AY++
Sbjct: 4 LKQIQAYTLRNGIEHTKQLIVSLLQIPS----IPYAHKLFDFIPKPTVFLYNKLIQAYSS 59
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
+ + +LY QM + P++ + F+ +CA L G+ +H H K G
Sbjct: 60 HGPHHQCFSLYTQMCLQGCS-----PNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFG 114
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
AL+D+Y K L A K F+EMT RD+ WN++I+GYAR G ++ A LF M
Sbjct: 115 CDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLM 174
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLELG 268
P + SWTAMISGY G YA+AL +F M + + P+E+++ SVLPACA LG+LE+G
Sbjct: 175 PARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVG 234
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLAN 327
E I +Y N + + NAL+EMY +CG I++A +F+++ R++ SW+++I GLA
Sbjct: 235 ERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAV 294
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
HG+ +AI LF++M R P+D+TF+G+L AC H G EG +F+SM+RD I K+E
Sbjct: 295 HGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLE 354
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
HYGC+VDLLG P A L L
Sbjct: 355 HYGCMVDLLG------------------PGA-------------------------LFEL 371
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
EP + GNYV+LSNIYA GRW+ V+R+RKL++ + K G S IE + +F+ D +
Sbjct: 372 EPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRS 431
Query: 508 KPFLKDIFWLLELLALHQDRAKDVID 533
+I+ LL+ +++ +V D
Sbjct: 432 HSRSDEIYALLDEVSMKMKLHGNVND 457
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 202/562 (35%), Positives = 289/562 (51%), Gaps = 79/562 (14%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLA----------YASLLFK-QVKEPNVFLYNAMIR 85
+L+ L + L TK I C+S LA +A +F + + FL N+MI+
Sbjct: 1 MLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIK 60
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
AY Y + LY RD R + PD FT + KSCA + G++IH+HV
Sbjct: 61 AYVGMRQYSESFALY----RDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVA 116
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR---------- 195
G AL+D+Y K ++ A K+F+EM DR V+W LI GY R
Sbjct: 117 VGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKL 176
Query: 196 ---------------------LGQMKKARMLFDKMPYTTIVSWT---------------- 218
LG M AR LFD+MP ++VSWT
Sbjct: 177 FDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSAR 236
Query: 219 ---------------AMISGYTHIGSYAEALDVFRQMQ-MVGIEPDEISIVSVLPACAQL 262
AMISGY EAL +F +MQ +EPDE++IVSVLPA A L
Sbjct: 237 SLFDAMPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADL 296
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
G+L+LG W+H + + L R T + ALI+MY KCG I ++ +FD M E++ SW+ +I
Sbjct: 297 GALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALI 356
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
A +G+A +A+ LF EM PN+IT IG+LSAC H+G EG +F +M+ + +
Sbjct: 357 NAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAME-EFGL 415
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
KIEHYGC+VDLLGRAG L +A ++E MP + + I S L +C ++ A ++
Sbjct: 416 TPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLK 475
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
+ +E + GNY++L N+YA RW++ ++ L+R +KK GCS IEV++ V EFV
Sbjct: 476 EAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFV 535
Query: 503 SGDDTKPFLKDIFWLLELLALH 524
+GD P + I +L L +H
Sbjct: 536 AGDRVHPKWEAIHSVLGQLWVH 557
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H + + L ++ + T +ID+ G++ + +F + E +NA+I A+ N
Sbjct: 305 VHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGR 364
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
A+ L+ +M +P++ T+ V+ +C GK+ + +FGL
Sbjct: 365 AKEALGLFMEM-----NHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEEFGLTPKI 419
Query: 153 ITENALLDLYGKCDELIEAHKVFEEM 178
++DL G+ L EA K+ E M
Sbjct: 420 EHYGCMVDLLGRAGCLQEAEKLMESM 445
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 200/598 (33%), Positives = 308/598 (51%), Gaps = 98/598 (16%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK-EP 75
+ +L+ C + L++IHTQ + + + N L+++ I + D Y++L+F + P
Sbjct: 24 LLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISL----KDFTYSTLIFSHITPHP 79
Query: 76 NVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
N + +N M+RA T H Y L ++LY QM +T + I P+ FT PFV +CA L
Sbjct: 80 NDYAFNIMLRATTTTWHDYPLTLHLYHQM----KTLN-ISPNNFTFPFVFLACANLEEIR 134
Query: 135 LGKQIHAHVCKFGLKSH-------------------------SITE------NALLDLYG 163
+ + H V K GL + ITE N+LL Y
Sbjct: 135 MARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYA 194
Query: 164 KCDELIEAHKVFE-----------------------EMTDRDIVAW-------------- 186
K EA +VF E+ D ++ W
Sbjct: 195 KLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNS 254
Query: 187 ---NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
+ LIS Y++ G++ +R +FD MP ++W A IS Y G EA+ +F M+
Sbjct: 255 YIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKEN 314
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G++P+++++ +VL ACA +G+L+LG+ + Y L + ALI+MY KCG + A
Sbjct: 315 GVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESA 374
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLLSACA 361
++F+ M ++ SW+ +I LA+HGKA +A+ LF M + PNDITF+ LLSAC
Sbjct: 375 QRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACV 434
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G +EG FD M + KIEHY C+VDLL RAG L +A ++IE+MP KPD
Sbjct: 435 HAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTL 494
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
G+L S+C+ N++I ++ LL L+P ++GNY++ S IY W+D +RMR L+R
Sbjct: 495 GALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMREN 554
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539
+ KTPGCS IEV N+++EF+SGD L L +++ID++YE++
Sbjct: 555 GVTKTPGCSWIEVGNQLREFLSGDG--------------LTLDSIDVRNIIDLLYEEL 598
>gi|414878289|tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
Length = 534
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 274/487 (56%), Gaps = 44/487 (9%)
Query: 76 NVFLYNAMIRAY-----TNNHLYGLAINLYKQMLRD--PRTGSLILPDKFTLPFVIKSCA 128
NV+L+ A I AY ++ + A+ L++ MLR PR P+ FT V++ C+
Sbjct: 52 NVYLWTATIAAYARHASSSPSVAEGALTLFRLMLRHGVPR------PNAFTASSVVRCCS 105
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT--------- 179
L +G Q+H + GL AL+D+YG + +A +VF+EM+
Sbjct: 106 ALRAVRVGIQVHGFLVNAGLGRAEHVRAALVDMYGNHGRVADARRVFDEMSATSVVLGNT 165
Query: 180 ----------------------DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
+RD+++WN L+ GY R G AR LF++MP + SW
Sbjct: 166 MVACYVRAGDVESGRVVFDRMVERDLISWNTLMMGYLRQGGAGVARELFEEMPDRNVNSW 225
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
I+ Y+ S+A+A+ VF +M++ +PD ++ ++ ACAQLGSL + +H K
Sbjct: 226 NMAIAAYSQERSWADAVAVFNRMRLARFQPDPATMAVLMSACAQLGSLSVARQVHGILRK 285
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + N+LI+MY KCG I+QA LF + +D VS++ +I LA HG A+ +
Sbjct: 286 GCVEMNFHVLNSLIDMYAKCGSISQAHLLFVETHLKDTVSYNVMICALARHGHGRDALQV 345
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F EM + ++ P+ +T +G+LSACAH G ++G YF+SMK ++ IE +HY C+VDL G
Sbjct: 346 FDEMSKERLQPDAVTLLGVLSACAHAGLVHDGKFYFESMKTNYAIEQSPDHYACMVDLYG 405
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
RAG + +A + MPM+P A +WG+L+++CR + N+E+ +A L+ +EP + G YVL
Sbjct: 406 RAGLIKEAYELARAMPMEPHAGVWGALINACRKHCNVEVGKVAARELIAIEPRNPGTYVL 465
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWL 517
L+N A+ +WE V + + +R K ++KT GCS +EV N V EF+ G+ + P +I+ +
Sbjct: 466 LANTLARGQQWEFVETVWQSMRGKGIEKTAGCSWLEVENVVHEFLMGESSHPNSDEIYSI 525
Query: 518 LELLALH 524
LE L L
Sbjct: 526 LEHLYLQ 532
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 39/320 (12%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G A LF+++ + NV +N I AY+ + A+ ++ +M R R PD T
Sbjct: 205 GGAGVARELFEEMPDRNVNSWNMAIAAYSQERSWADAVAVFNRM-RLAR----FQPDPAT 259
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ ++ +CA L S+ +Q+H + K ++ + N+L+D+Y KC + +AH +F E
Sbjct: 260 MAVLMSACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQAHLLFVETH 319
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+D V++N +I AR G + +AL VF +
Sbjct: 320 LKDTVSYNVMICALARHGHGR-------------------------------DALQVFDE 348
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA-LIEMYIKCG 298
M ++PD ++++ VL ACA G + G++ N+ + ++ A ++++Y + G
Sbjct: 349 MSKERLQPDAVTLLGVLSACAHAGLVHDGKFYFESMKTNYAIEQSPDHYACMVDLYGRAG 408
Query: 299 CINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
I +A +L M +E W +I H E+ ++ P N T++ L
Sbjct: 409 LIKEAYELARAMPMEPHAGVWGALINACRKHCNVEVGKVAARELIAIE-PRNPGTYVLLA 467
Query: 358 SACAHTGFWNEGLMYFDSMK 377
+ A W + SM+
Sbjct: 468 NTLARGQQWEFVETVWQSMR 487
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 37/199 (18%)
Query: 16 RFVP-------ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
RF P ++ +C L L +++H + K + + ++ +ID+ G ++ A
Sbjct: 252 RFQPDPATMAVLMSACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQA 311
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LLF + + YN MI A + A+ ++ +M ++ + PD TL V+
Sbjct: 312 HLLFVETHLKDTVSYNVMICALARHGHGRDALQVFDEMSKE-----RLQPDAVTLLGVLS 366
Query: 126 SC--AGLLCPSLGKQIHAHVCKF---GLKSHSITENA------LLDLYGKCDELIEAHKV 174
+C AGL+ H KF +K++ E + ++DLYG+ + EA+++
Sbjct: 367 ACAHAGLV----------HDGKFYFESMKTNYAIEQSPDHYACMVDLYGRAGLIKEAYEL 416
Query: 175 FEEMT-DRDIVAWNNLISG 192
M + W LI+
Sbjct: 417 ARAMPMEPHAGVWGALINA 435
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 283/497 (56%), Gaps = 6/497 (1%)
Query: 31 KKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+ IH K + QS ++ + S L A LF ++ + +V + +I Y
Sbjct: 150 EAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYAR 209
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
L A ++ +M+ + P++ TL + + LG+ +H + + G +
Sbjct: 210 GGLPDEAWRVFCRMV----VAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGR 265
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
ENAL+D++GKC + A +VF+ M +D+ +W +++S YA+ G ++ A LF ++
Sbjct: 266 MSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEI 325
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P +VSW+ M++ Y+H EA+ +F M G+EP + ++VSVL ACAQL SL++G
Sbjct: 326 PNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGT 385
Query: 270 WIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
W++ +H + T + NA I+M+ KCG + AS+LF M +++VVSW+T+I H
Sbjct: 386 WLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLH 445
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G+ +A+HLF E + + P++ T+IG+LSAC+H G +EG +F MK + IE + EH
Sbjct: 446 GQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKEMKIVYGIEPRAEH 505
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
Y C++DLLG+ G L +A + MP+ D WG+LL++CR + N+EI A + L L+
Sbjct: 506 YACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLAGLD 565
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
P D+G YVL+S IYA +W V +R ++R + +KK PGCS IEV+ + EF+ D +
Sbjct: 566 PSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGCSSIEVDGKCHEFLVADVSH 625
Query: 509 PFLKDIFWLLELLALHQ 525
+DI+ L + LH
Sbjct: 626 VHSEDIYAALGNIYLHS 642
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 188/428 (43%), Gaps = 72/428 (16%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKE-PN 76
+L+SC + L ++ + L+ + F ++++ C + LA+A+ + Q E PN
Sbjct: 37 VLESCASFRRLLQLQALLTVSGLASNRFPASRLLAFCALSDPPRLAHAAAVLAQCTEGPN 96
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++ M+R + A+ L++++LRD + D T+ F +K+ A P+
Sbjct: 97 AYMLATMMRGFLRAGKPTHALTLFRRVLRD-----RLAVDARTIVFAVKAAATSSSPT-- 149
Query: 137 KQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
+ IH K G S+ NAL+ +Y L +A K+F+EM DRD+V+W LI GYAR
Sbjct: 150 EAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYAR 209
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G +A +F +M V W P+E+++V+
Sbjct: 210 GGLPDEAWRVFCRMVVAESV-W-----------------------------PNEVTLVAA 239
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
A Q+G L LG +H ++ + NAL++M+ KCGC+ A ++FD M +DV
Sbjct: 240 ASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDV 299
Query: 316 VSWSTVI------GGLANHGKAHK-------------------------AIHLFHEMQRL 344
SW++++ G L N K K AI +F++M
Sbjct: 300 YSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAA 359
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
V P D T + +LSACA + G +D+ H +E +D+ + G +
Sbjct: 360 GVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGA 419
Query: 405 ALNIIEEM 412
A + M
Sbjct: 420 ASRLFSNM 427
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 23/215 (10%)
Query: 7 ALSIKELEDRFVPILQSCENLIELKK----IHTQILKYLLSQSNFLVTKMIDVCNSGGDL 62
A ++ ++ V +L +C L L T I+ + + + L ID+ GD+
Sbjct: 358 AAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDV 417
Query: 63 AYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPF 122
AS LF +++ NV +N MI A+ + A++L+++ G+ ILPD+ T
Sbjct: 418 GAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEF-----KGNGILPDEATYIG 472
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKF-------GLKSHSITENALLDLYGKCDELIEAHKVF 175
V+ +C S G + C F G++ + ++DL GK L EA +V
Sbjct: 473 VLSAC------SHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVA 526
Query: 176 EEM-TDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
M D W L++ G ++ + DK+
Sbjct: 527 RSMPVGADEAGWGALLNACRMHGNVEIGKCAADKL 561
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 283/497 (56%), Gaps = 6/497 (1%)
Query: 31 KKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+ IH K + QS ++ + S L A LF ++ + +V + +I Y
Sbjct: 150 EAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYAR 209
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
L A ++ +M+ + P++ TL + + LG+ +H + + G +
Sbjct: 210 GGLPDEAWRVFCRMV----VAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGR 265
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
ENAL+D++GKC + A +VF+ M +D+ +W +++S YA+ G ++ A LF ++
Sbjct: 266 MSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEI 325
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P +VSW+ M++ Y+H EA+ +F M G+EP + ++VSVL ACAQL SL++G
Sbjct: 326 PNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGT 385
Query: 270 WIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
W++ +H + T + NA I+M+ KCG + AS+LF M +++VVSW+T+I H
Sbjct: 386 WLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLH 445
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G+ +A+HLF E + + P++ T+IG+LSAC+H G +EG +F MK + IE + EH
Sbjct: 446 GQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKEMKIVYGIEPRAEH 505
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
Y C++DLLG+ G L +A + MP+ D WG+LL++CR + N+EI A + L L+
Sbjct: 506 YACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLAGLD 565
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
P D+G YVL+S IYA +W V +R ++R + +KK PGCS IEV+ + EF+ D +
Sbjct: 566 PSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGCSSIEVDGKCHEFLVADVSH 625
Query: 509 PFLKDIFWLLELLALHQ 525
+DI+ L + LH
Sbjct: 626 VHSEDIYAALGNIYLHS 642
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 189/431 (43%), Gaps = 72/431 (16%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKE-PN 76
+L+SC + L ++ + L+ + F ++++ C + LA+A+ + Q E PN
Sbjct: 37 VLESCASFRRLLQLQALLTVSGLASNRFPASRLLAFCALSDPPRLAHAAAVLAQCTEGPN 96
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++ M+R + A+ L++++LRD + D T+ F +K+ A P+
Sbjct: 97 AYMLATMMRGFLRAGKPTHALTLFRRVLRD-----RLAVDARTIVFAVKAAATSSSPT-- 149
Query: 137 KQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
+ IH K G S+ NAL+ +Y L +A K+F+EM DRD+V+W LI GYAR
Sbjct: 150 EAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYAR 209
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G +A +F +M V W P+E+++V+
Sbjct: 210 GGLPDEAWRVFCRMVVAESV-W-----------------------------PNEVTLVAA 239
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
A Q+G L LG +H ++ + NAL++M+ KCGC+ A ++FD M +DV
Sbjct: 240 ASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDV 299
Query: 316 VSWSTVI------GGLANHGKAHK-------------------------AIHLFHEMQRL 344
SW++++ G L N K K AI +F++M
Sbjct: 300 YSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAA 359
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
V P D T + +LSACA + G +D+ H +E +D+ + G +
Sbjct: 360 GVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGA 419
Query: 405 ALNIIEEMPMK 415
A + M K
Sbjct: 420 ASRLFSNMEDK 430
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 23/215 (10%)
Query: 7 ALSIKELEDRFVPILQSCENLIELKK----IHTQILKYLLSQSNFLVTKMIDVCNSGGDL 62
A ++ ++ V +L +C L L T I+ + + + L ID+ GD+
Sbjct: 358 AAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDV 417
Query: 63 AYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPF 122
AS LF +++ NV +N MI A+ + A++L+++ G+ ILPD+ T
Sbjct: 418 GAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEF-----KGNGILPDEATYIG 472
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKF-------GLKSHSITENALLDLYGKCDELIEAHKVF 175
V+ +C S G + C F G++ + ++DL GK L EA +V
Sbjct: 473 VLSAC------SHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVA 526
Query: 176 EEM-TDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
M D W L++ G ++ + DK+
Sbjct: 527 RSMPVGADEAGWGALLNACRMHGNVEIGKCAADKL 561
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 274/500 (54%), Gaps = 31/500 (6%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDP- 107
T +I G + A +LF+Q+ EP V +NA+I Y N + A L+ +M R+
Sbjct: 326 TALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTI 385
Query: 108 --------------------------RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
R+G +LP +L + +C+ ++ G Q+H+
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQELHRSG--MLPSLSSLTSIFFACSNIVALETGTQVHS 443
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
K G + +S NAL+ +YGKC + A +VF M +DIV+WN+ ++ + + +
Sbjct: 444 LAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDE 503
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
AR FD M VSWT +IS Y H EA+ F+ M P+ + +L C
Sbjct: 504 ARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGS 563
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
LG+ ++G+ IH K + ++ NALI MY KCGC + + ++FD M ERD+ +W+T+
Sbjct: 564 LGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTI 622
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I G A HG +AI ++ M+ V PN++TF+GLL+AC+H G +EG +F SM +D+
Sbjct: 623 ITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYG 682
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
+ EHY C+VDLLGR G + A I +MP++PD IW +LL +C+ + N EI A
Sbjct: 683 LTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAA 742
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
E L +EP + GNYV+LSNIY+ G W +V+ +RK+++ + + K PGCS ++ +++ F
Sbjct: 743 EKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSF 802
Query: 502 VSGDDTKPFLKDIFWLLELL 521
V+GD +++I LE L
Sbjct: 803 VTGDKQHEQIEEIVATLEEL 822
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 196/411 (47%), Gaps = 51/411 (12%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR-DPRTGSLILPDKF 118
G + A +F + ++ +N+MI AY +N + A +LY + + RTG+++L
Sbjct: 48 GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYG 107
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
L V+++ V L+ +++ NA++ Y + ++ A ++F+ M
Sbjct: 108 RLGRVLEA--------------RRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM 153
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
RD+ +WN++++GY QM AR LF+KMP +VSWT MISGY I ++ +A D+F
Sbjct: 154 PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFC 213
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK-C 297
+M G+ PD+ + S L A LG+L++ E + + K R VI A++ +Y +
Sbjct: 214 KMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH------------------ 339
++ A + F+ M+ER+ +WST+I L++ G+ AI ++
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLA 333
Query: 340 EMQRL--------KVP-PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+ R+ ++P P +++ L++ G NE FD M + I +
Sbjct: 334 QCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTIS-----WA 388
Query: 391 CLVDLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLEIAV 438
++ + GR ++AL +++E+ M P S+ +C LE
Sbjct: 389 GMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGT 439
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 114/294 (38%), Gaps = 76/294 (25%)
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
I RLG++ +AR +FD MP I++W +MIS Y H G A D++ + +
Sbjct: 41 IRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGA 100
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
I +L +LG + + L R TV NA+I Y++ G I A +LFD
Sbjct: 101 I----LLSGYGRLGRVLEARRVF----DGMLERNTVAWNAMISCYVQNGDITMARRLFDA 152
Query: 310 MVERDVVSWSTVIGG----------------------------------LANHGKAHKAI 335
M RDV SW++++ G + NHGKA
Sbjct: 153 MPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWD-- 210
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACA----------------HTGFWNE---GLMYFDSM 376
+F +M R + P+ F LSA TGF + G +
Sbjct: 211 -IFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 377 KRDHHI--------EHKIEH----YGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
RD + E IE + ++ L GR+D A+ + E P+K A
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIA 323
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
C+A I + G + +A ++FD M RD+++W+++I ++G A L+ + +
Sbjct: 37 CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM 96
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
I LLS G E FD M +E + ++ + G + A
Sbjct: 97 RTGAI----LLSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNGDITMAR 147
Query: 407 NIIEEMPMKPDAKIWGSLLS 426
+ + MP + D W S+L+
Sbjct: 148 RLFDAMPSR-DVSSWNSMLT 166
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 261/444 (58%), Gaps = 7/444 (1%)
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
A+ R L A L ML P + P+ TL V+ +CAG L + +
Sbjct: 37 AIARPAREGDLPATAAAL-SAMLSSPAAPA---PNDVTLLTVLSACAGAPSSPLARPLAL 92
Query: 142 HVCKFG---LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+ SH + L Y A ++F MT R +V +N +I+G R G
Sbjct: 93 SLHALAAKLFPSHLLLCTCLARFYLASRLPHLALQLFGSMTVRSLVTYNTMITGLMRNGL 152
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ AR +FD MP VSWTA+I G G + EA+D F M + G+EPD +++V+ + A
Sbjct: 153 VAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLVAAISA 212
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA++G+L LG W+H + L I N+LI+MY +CG + A Q+FD M R VVSW
Sbjct: 213 CAEVGALGLGMWVHRLVTRERLEGNIRIANSLIDMYARCGQVEFARQVFDSMRNRTVVSW 272
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+++I G A +G+ AI F M+R P+ +TF G+L+AC+H G +EGL Y+ +M+
Sbjct: 273 NSMIVGFAANGRCTDAIEHFEAMRRKGFRPDAVTFTGVLTACSHAGLTDEGLRYYKAMRA 332
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+H I ++EHYGC+VDLLGRAGRL +A++++ MPM+P+ + G+LL+ CR + ++++A
Sbjct: 333 EHGITARMEHYGCVVDLLGRAGRLGEAMSVVATMPMRPNEVVLGALLAGCRMHGDVDMAE 392
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
M+HLL +P NYVLLSNIYA G+W+ ++R L++++ +KK PG S +E++ +V
Sbjct: 393 QLMQHLLEQDPGGDSNYVLLSNIYAATGKWDGAGKVRGLMKARGVKKRPGRSAVEIDGDV 452
Query: 499 QEFVSGDDTKPFLKDIFWLLELLA 522
EFV GD + P ++F +L LL+
Sbjct: 453 HEFVCGDRSHPQADEVFDMLGLLS 476
>gi|218193370|gb|EEC75797.1| hypothetical protein OsI_12731 [Oryza sativa Indica Group]
Length = 523
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 269/484 (55%), Gaps = 9/484 (1%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG-DLAYASLLFKQVKEPNVFLYNA 82
C ++ L+++H ++K L++ ++ + C G D AYA+ L + PN F++N
Sbjct: 45 CASMAHLRQLHAALVKSGLARDPIAASRAVAFCAGDGRDAAYAARLVRHHPRPNAFMWNT 104
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
IRA + G A+ L+ ML GS P++ T P + + A L G +H
Sbjct: 105 AIRALADGPGPGAAVALFVDML-----GSPTPPERRTFPSLFAAYARLGRAGDGAGLHGM 159
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V K GL + N+++ +Y EA + D VA N+ I AR G++ +A
Sbjct: 160 VVKLGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALARAGRVDEA 219
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R +FD MP T+ +W+AM+S Y+ +A+++F MQ G+EP+ +VSVL CA L
Sbjct: 220 RAVFDGMPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVSVLGCCASL 279
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD---VVSWS 319
G+LE G W+H Y DK+ + ++ AL++MY KCG I +A ++FD R + SW+
Sbjct: 280 GALEQGAWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWN 339
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+++ G A HG+ +A LF E++ + P+++TFI +L A H+G +E SM +
Sbjct: 340 SMMLGHAVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVLASMASE 399
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
H + +EHYGCLVD L RAGRL +A +I MP+ PDA +WG+LLS CR + + E A
Sbjct: 400 HGVVPGVEHYGCLVDALARAGRLREAEGVIAAMPVAPDAAVWGALLSGCRLHGDAEAAAR 459
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A + +P D+G YVL ++ A+ G + +R +R + + K PGCS+IEV+ V
Sbjct: 460 AAREAVRCDPRDSGAYVLAASALARGGEARRGAAVRGRMREEGVGKVPGCSMIEVDGVVH 519
Query: 500 EFVS 503
EFVS
Sbjct: 520 EFVS 523
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 274/500 (54%), Gaps = 31/500 (6%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDP- 107
T +I G + A +LF+Q+ EP V +NA+I Y N + A L+ +M R+
Sbjct: 326 TALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTI 385
Query: 108 --------------------------RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
R+G +LP +L + +C+ ++ G Q+H+
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQELHRSG--MLPSLSSLTSIFFACSNIVALETGTQVHS 443
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
K G + +S NAL+ +YGKC + A +VF M +DIV+WN+ ++ + + +
Sbjct: 444 LAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDE 503
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
AR FD M VSWT +IS Y H EA+ F+ M P+ + +L C
Sbjct: 504 ARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGS 563
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
LG+ ++G+ IH K + ++ NALI MY KCGC + + ++FD M ERD+ +W+T+
Sbjct: 564 LGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTI 622
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I G A HG +AI ++ M+ V PN++TF+GLL+AC+H G +EG +F SM +D+
Sbjct: 623 ITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYG 682
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
+ EHY C+VDLLGR G + A I +MP++PD IW +LL +C+ + N EI A
Sbjct: 683 LTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAA 742
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
E L +EP + GNYV+LSNIY+ G W +V+ +RK+++ + + K PGCS ++ +++ F
Sbjct: 743 EKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSF 802
Query: 502 VSGDDTKPFLKDIFWLLELL 521
V+GD +++I LE L
Sbjct: 803 VTGDKQHEQIEEIVATLEEL 822
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 196/411 (47%), Gaps = 51/411 (12%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR-DPRTGSLILPDKF 118
G + A +F + ++ +N+MI AY +N + A +LY + + RTG+++L
Sbjct: 48 GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYG 107
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
L V+++ V L+ +++ NA++ Y + ++ A ++F+ M
Sbjct: 108 RLGRVLEA--------------RRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM 153
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
RD+ +WN++++GY QM AR LF+KMP +VSWT MISGY I ++ +A D+F
Sbjct: 154 PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFC 213
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK-C 297
+M G+ PD+ + S L A LG+L++ E + + K R VI A++ +Y +
Sbjct: 214 KMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH------------------ 339
++ A + F+ M+ER+ +WST+I L++ G+ AI ++
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLA 333
Query: 340 EMQRL--------KVP-PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+ R+ ++P P +++ L++ G NE FD M + I +
Sbjct: 334 QCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTIS-----WA 388
Query: 391 CLVDLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLEIAV 438
++ + GR ++AL +++E+ M P S+ +C LE
Sbjct: 389 GMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGT 439
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 114/294 (38%), Gaps = 76/294 (25%)
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
I RLG++ +AR +FD MP I++W +MIS Y H G A D++ + +
Sbjct: 41 IRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGA 100
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
I +L +LG + + L R TV NA+I Y++ G I A +LFD
Sbjct: 101 I----LLSGYGRLGRVLEARRVF----DGMLERNTVAWNAMISCYVQNGDITMARRLFDA 152
Query: 310 MVERDVVSWSTVIGG----------------------------------LANHGKAHKAI 335
M RDV SW++++ G + NHGKA
Sbjct: 153 MPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWD-- 210
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACA----------------HTGFWNE---GLMYFDSM 376
+F +M R + P+ F LSA TGF + G +
Sbjct: 211 -IFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 377 KRDHHI--------EHKIEH----YGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
RD + E IE + ++ L GR+D A+ + E P+K A
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIA 323
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
C+A I + G + +A ++FD M RD+++W+++I ++G A L+ + +
Sbjct: 37 CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM 96
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
I LLS G E FD M +E + ++ + G + A
Sbjct: 97 RTGAI----LLSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNGDITMAR 147
Query: 407 NIIEEMPMKPDAKIWGSLLS 426
+ + MP + D W S+L+
Sbjct: 148 RLFDAMPSR-DVSSWNSMLT 166
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 290/566 (51%), Gaps = 74/566 (13%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID-VCNSGGDLAYAS 66
++++ + L+S +NL EL ++ +Q++ LSQ T I +C+ A+
Sbjct: 1 MAVRGKHEVLFAALESWKNLHELNQVLSQLIVSGLSQHPLFATSAIKKLCSHSVTFPRAT 60
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLY--KQMLRDPRTGSLILPDKFTLPFVI 124
LF + P+ F N +IRAY + A+ Y K + R + P+ +T P +I
Sbjct: 61 FLFDHLHHPDAFHCNTIIRAYARKPDFPAALRFYYCKMLARS------VPPNHYTFPLLI 114
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG--------------------- 163
K C + G + HA + KFG S N+L+ +Y
Sbjct: 115 KVCTDIGSFREGLKGHARIVKFGFGSDLFARNSLIRMYSVFGRIGNARMVFDESCWLDLV 174
Query: 164 ----------KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
K E+ A KVF EM DRD+++WN LI+GY +G + A LF+ +P
Sbjct: 175 SYNSMIDGYVKNGEIGAARKVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETIPERD 234
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQM-------------------------------QM 242
VSW MI G +G+ + A+ F +M +M
Sbjct: 235 AVSWNCMIDGCARVGNVSLAVKFFDRMPAAVRNVVSWNSVLALHARVKNYGECLMLFGKM 294
Query: 243 V-GIE--PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
V G E P+E ++VSVL ACA LG L +G W+H + N++ ++ L+ MY KCG
Sbjct: 295 VEGREAVPNEATLVSVLTACANLGKLSMGMWVHSFIRSNNIKPDVLLLTCLLTMYAKCGA 354
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++ A +FD+M R VVSW+++I G HG KA+ LF EM++ PND TFI +LSA
Sbjct: 355 MDLAKGVFDEMPVRSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLSA 414
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C H G EG YFD M+R + IE K+EHYGC+VDLL RAG ++ + +I +P+K +
Sbjct: 415 CTHAGMVMEGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKAGSA 474
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IWG+LLS C + + E+ I + + LEP+D G Y+LLSN+YA GRW+DV +R +I+
Sbjct: 475 IWGALLSGCSNHLDSELGEIVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVEHVRLMIK 534
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGD 505
K ++K SL+ + + ++V +
Sbjct: 535 EKGLQKEAASSLVHLEDFESKYVKNN 560
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/435 (37%), Positives = 254/435 (58%), Gaps = 10/435 (2%)
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS- 134
N+F+YN+MIR Y +H AI Y ML +L + +T P +IK+C L S
Sbjct: 348 NIFMYNSMIRGYVLSHSPTRAILCYLDMLNYG-----LLANNYTFPPLIKACTTLGSSSK 402
Query: 135 -LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+G +HAHV FG +AL++ Y ++ A +F+ + +RD+V W +I GY
Sbjct: 403 LIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGY 462
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
++G ++ AR+LF+ MP +SW+A+++ Y+ +G + E L +FR+MQ G P+E +V
Sbjct: 463 GKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLV 522
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL ACA LG+L G W+H Y + + ++ AL++MY KCGC+ A F + +
Sbjct: 523 SVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNK 582
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +W+ +I G+A +G A K++ LF++M P + TF+ +L+AC H EGL F
Sbjct: 583 DAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREGLKLF 642
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP---MKPDAKIWGSLLSSCRT 430
+ M ++ +E + EHY CLVDL+ RAG L +A IEE + DA +WG+ L +CRT
Sbjct: 643 EQMSSNYGVEPQXEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAXLGACRT 702
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
Y N+E+ + L + D G +VL N+Y + G + R+R+LI MKK PGCS
Sbjct: 703 YGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEXGMKKKPGCS 762
Query: 491 LIEVNNEVQEFVSGD 505
+IEV+ V+EF++GD
Sbjct: 763 IIEVDGTVEEFLAGD 777
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 10/227 (4%)
Query: 48 LVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDP 107
L T MID GD+ +A +LF+ + E N ++A++ AY+ + + L+++M
Sbjct: 454 LWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQE-- 511
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
+ +P++ L V+ +CA L + G +H++ + S+ I AL+D+Y KC
Sbjct: 512 ---AGTMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGC 568
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM----PYTTIVSWTAMISG 223
+ A F+ + ++D AWN +ISG A G K+ LF+KM T ++ A+++
Sbjct: 569 VESALSTFQGIPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTA 628
Query: 224 YTHIGSYAEALDVFRQMQM-VGIEPDEISIVSVLPACAQLGSLELGE 269
TH E L +F QM G+EP ++ A+ G L E
Sbjct: 629 CTHARLVREGLKLFEQMSSNYGVEPQXEHYACLVDLMARAGMLAEAE 675
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/472 (36%), Positives = 264/472 (55%), Gaps = 44/472 (9%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI G+L A LF++ +VF + AM+ Y N + A ++ M
Sbjct: 241 MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM-------- 292
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
P+K +S++ NA++ Y +C + +A
Sbjct: 293 ---PEK---------------------------------NSVSWNAIIAGYVQCKRMDQA 316
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
++FE M +++ +WN +I+GYA+ G + +AR FD+MP +SW A+I+GY G
Sbjct: 317 RELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGE 376
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL +F +M+ G + + S L CA++ +LELG+ +H K L + NAL+
Sbjct: 377 EALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALL 436
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
MY KCG I+ A +F+ + E++VVSW+T+I G A HG +A+ LF M++ + P+D+
Sbjct: 437 VMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDV 496
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +G+LSAC+HTG ++G YF SM +D+ I +HY C++DLLGRAGRLD A N+++
Sbjct: 497 TMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 556
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MP +PDA WG+LL + R + N E+ A + + +EP+++G YVLLSN+YA GRW DV
Sbjct: 557 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDV 616
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
RMR +R + +KK PG S +EV N++ F GD P I+ LE L L
Sbjct: 617 GRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDL 668
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 140/284 (49%), Gaps = 30/284 (10%)
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ SI+ NA++ D+ A ++FE+M RD+V+WN +ISG R ++ AR+LFD+
Sbjct: 77 RRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQ 136
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
MP +VSW AM+SGY G EA ++F +M + IS +L A Q G +E
Sbjct: 137 MPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC----KNSISWNGMLAAYVQNGRIE-- 190
Query: 269 EWIHMYCDKNHLLRRT-----VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
D L + N ++ Y+K + A +FD+M ERD VSW+T+I
Sbjct: 191 -------DARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMIS 243
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
G A +G+ +A LF E P D+ T+ ++S G +E FD M + +
Sbjct: 244 GYAQNGELLEAQRLFEE-----SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSV 298
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ ++ + R+DQA + E MP + + W ++++
Sbjct: 299 S-----WNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMIT 336
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 148/329 (44%), Gaps = 58/329 (17%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI C +L A LLF Q+ E +V +NAM+ Y N A ++ +M
Sbjct: 117 MISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM-------- 168
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
CK +SI+ N +L Y + + +A
Sbjct: 169 -------------------------------PCK-----NSISWNGMLAAYVQNGRIEDA 192
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
++FE D ++++WN ++ GY + ++ AR +FD+MP VSW MISGY G
Sbjct: 193 RRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELL 252
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EA +F + + D + +++ Q G L+ + + +V NA+I
Sbjct: 253 EAQRLFEESPV----RDVFTWTAMVSGYVQNGMLDEARRVF----DGMPEKNSVSWNAII 304
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND- 350
Y++C ++QA +LF+ M ++V SW+T+I G A +G +A + F M P D
Sbjct: 305 AGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRM-----PQRDS 359
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
I++ +++ A +G+ E L F MKRD
Sbjct: 360 ISWAAIIAGYAQSGYGEEALHLFVEMKRD 388
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 104/248 (41%), Gaps = 49/248 (19%)
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
TD DIV WN I+ + R GQ A LF+ MP + +SW AMISG + A +F
Sbjct: 45 TDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFE 104
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+M R V N +I ++
Sbjct: 105 KMPT---------------------------------------RDLVSWNVMISGCVRYR 125
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ A LFDQM ERDVVSW+ ++ G A +G +A +F EM N I++ G+L+
Sbjct: 126 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGMLA 181
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
A G + F+S + ++ + C++ + RL A I + MP + D
Sbjct: 182 AYVQNGRIEDARRLFES-----KADWELISWNCMMGGYVKRNRLVDARGIFDRMPER-DE 235
Query: 419 KIWGSLLS 426
W +++S
Sbjct: 236 VSWNTMIS 243
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L +C + L K++H +++K L ++ ++ + G++ A ++F+ ++
Sbjct: 397 FTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE 456
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E V +N MI Y + A+ L++ M +TG ILPD T+ V+ +C+
Sbjct: 457 EKEVVSWNTMIAGYARHGFGKEALMLFESM---KKTG--ILPDDVTMVGVLSACSHTGLV 511
Query: 134 SLGKQ-IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNL-- 189
G + ++ +G+ ++S ++DL G+ L +A + + M + D W L
Sbjct: 512 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 571
Query: 190 ---ISGYARLGQMKKARMLFDKMP 210
I G LG+ K A+M+F+ P
Sbjct: 572 ASRIHGNTELGE-KAAKMIFEMEP 594
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
NQ + D+V W+ I +G+ A+ LF+ M R + I++ ++S C
Sbjct: 35 NQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPR----RSSISWNAMISGC 90
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
+ F+ M + + GC+ RA RL + ++MP + D
Sbjct: 91 LSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARL-----LFDQMPER-DVVS 144
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
W ++LS Y+ A E + +++ ++ + Y ++GR ED R+L S
Sbjct: 145 WNAMLSG---YAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDA---RRLFES 198
Query: 481 KS 482
K+
Sbjct: 199 KA 200
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 295/512 (57%), Gaps = 19/512 (3%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNF-----LVTKMIDVCNSGGDLAYASLLFKQV 72
V ++ +C L + K +I+ + + F L T MID+ G + A +F ++
Sbjct: 263 VTVVFACAKLGAMHK--ARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRM 320
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+E NV ++AMI AY + A++L++ ML S +LPDK TL ++ +C
Sbjct: 321 EEKNVISWSAMIAAYGYHGQGRKALDLFRMML-----SSGMLPDKITLASLLYACINCRN 375
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+ +Q+HA G+ + I N L+ Y L +A+ +F+ M RD V+W+ ++ G
Sbjct: 376 LTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 435
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYT--HIGSYAEALDVFRQMQMVGIEPDEI 250
+A++G F ++ + A YT G+ E+L +F +M+ G+ PD++
Sbjct: 436 FAKVGDYMNCFGTFREL-----IRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKV 490
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++V+V+ ACA+LG++ I Y + ++ A+I+M+ KCGC+ A ++FD+M
Sbjct: 491 AMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM 550
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
E++V+SWS +I HG+ KA+ LF M R + PN IT + LL AC+H G EGL
Sbjct: 551 EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGL 610
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+F M D+ + ++HY C+VDLLGRAGRLD+AL +IE M ++ D +WG+ L +CRT
Sbjct: 611 RFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRT 670
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ ++ +A A LL L+P++ G+Y+LLSNIYA GRWEDV++ R L+ + +KK PG +
Sbjct: 671 HKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWT 730
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
IEV+N+ +F GD T P K+I+ +L+ L
Sbjct: 731 WIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLG 762
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 134/273 (49%), Gaps = 49/273 (17%)
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+Q+HA G+ + + N L+ Y L +A+ +F+ M RD V+W+ ++ G+A++
Sbjct: 98 RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 157
Query: 197 G-------------------------------------------------QMKKARMLFD 207
G +++ AR LFD
Sbjct: 158 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFD 217
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
KM +V+WT MI GY G E+L +F +M+ G+ PD++++V+V+ ACA+LG++
Sbjct: 218 KMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHK 277
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
I Y + ++ A+I+MY KCGC+ A ++FD+M E++V+SWS +I
Sbjct: 278 ARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGY 337
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
HG+ KA+ LF M + P+ IT LL AC
Sbjct: 338 HGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 183/425 (43%), Gaps = 73/425 (17%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
++ L +C NL +++++H Q + + ++ + K+I + L A LF + +
Sbjct: 84 YISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRD 143
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++ M+ + G IN + R G+ PD +TLPFVI++C L
Sbjct: 144 SVSWSVMVGGFAK---VGDYINCFGTFRELIRCGAR--PDNYTLPFVIRACRDL------ 192
Query: 137 KQIHAHVCKFGLKSHSITENALL-------DL---------YGKCDELIEAHKVFEEMTD 180
K + + +K I + L DL Y +C + E+ +FE+M +
Sbjct: 193 KNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE 252
Query: 181 R---------------------------------------DIVAWNNLISGYARLGQMKK 201
D++ +I YA+ G ++
Sbjct: 253 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVES 312
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
AR +FD+M ++SW+AMI+ Y + G +ALD+FR M G+ PD+I++ S+L AC
Sbjct: 313 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACIN 372
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
+L +H + +L+ ++ N L+ Y ++ A LFD M RD VSWS +
Sbjct: 373 CRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVM 432
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
+GG A G F E+ R P++ T L C + NE L+ FD M+ +
Sbjct: 433 VGGFAKVGDYMNCFGTFRELIRCGARPDNYT----LPFCGNA---NESLVLFDKMREEGV 485
Query: 382 IEHKI 386
+ K+
Sbjct: 486 VPDKV 490
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 124/246 (50%), Gaps = 23/246 (9%)
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+IV N LI Y+ + A LFD M VSW+ M+ G+ +G Y FR++
Sbjct: 112 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 171
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
G PD ++ V+ AC L +L++ AL++MY+KC I
Sbjct: 172 RCGARPDNYTLPFVIRACRDLKNLQM---------------------ALVDMYVKCREIE 210
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
A LFD+M ERD+V+W+ +IGG A GKA++++ LF +M+ V P+ + + ++ ACA
Sbjct: 211 DARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA 270
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
G ++ + D ++R + + ++D+ + G ++ A I + M K + W
Sbjct: 271 KLGAMHKARIIDDYIQRK-KFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK-NVISW 328
Query: 422 GSLLSS 427
+++++
Sbjct: 329 SAMIAA 334
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/461 (37%), Positives = 267/461 (57%), Gaps = 15/461 (3%)
Query: 42 LSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYK 101
+S++ T MI G+L A + F ++ E +V +NAM+ Y I L+
Sbjct: 181 ISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFN 240
Query: 102 QMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC-KFGLKSHSITENALLD 160
ML + PD+ T VI SC+ L P L + I + K G + + + ALLD
Sbjct: 241 DMLSPGN----VQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLD 296
Query: 161 LYGKCDELIEAHKVFEEM---TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
++ KC L AHK+FE++ R V WN +IS YAR+G + A+ LFDKMP VSW
Sbjct: 297 MHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSW 356
Query: 218 TAMISGYTHIGSYAEALDVFRQM--QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
+MI+GYT G +A+ +F +M +PDE+++VSV AC LG L LG W
Sbjct: 357 NSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSIL 416
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
NH+ + N+LI MY +CG + A +F +M RD+VS++T+I G A HG ++I
Sbjct: 417 KVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESI 476
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
L +M+ + P+ IT+I +L+AC+H G +EG F+S+K ++HY C++D+
Sbjct: 477 ELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFP-----DVDHYACMIDM 531
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGRAGRL++A+ +I+ MPM+P A I+GSLL++ + +E+ +A L +EP ++GNY
Sbjct: 532 LGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNY 591
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
LLSNIYA GRW++ ++R +R + +KKT G S +E N+
Sbjct: 592 ALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHNS 632
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 192/427 (44%), Gaps = 84/427 (19%)
Query: 63 AYASLLFKQVKEPNVFLYNAMIRAYTNNHLYG-LAINLYKQMLRDPRTGSLILPDKFTLP 121
+Y +F P+V ++ M++ Y+ ++ + ++L+K ML+ I P+
Sbjct: 38 SYTCHIFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCD----IKPNASFYS 93
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
++KS S AHV K G N +L +Y K + A K+F+EM DR
Sbjct: 94 VMMKSAG-----SESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDR 148
Query: 182 DIVAWNNLISGY-----------------------------------ARLGQMKKARMLF 206
+ WN +ISGY A+ G +K ARM F
Sbjct: 149 TVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYF 208
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSL 265
DKMP ++VSW AM+SGY G+ E + +F M G ++PDE + +V+ +C+ LG
Sbjct: 209 DKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDP 268
Query: 266 ELGEWI-----------------------HMYC---DKNHLL---------RRTVICNAL 290
L E I H C + H + R +V NA+
Sbjct: 269 CLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAM 328
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPP 348
I Y + G + A LFD+M +RD VSW+++I G +G++ KAI LF EM P
Sbjct: 329 ISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKP 388
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+++T + + SAC H G G + S+ + +HI+ I Y L+++ R G + A+ I
Sbjct: 389 DEVTMVSVFSACGHLGELGLG-NWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLI 447
Query: 409 IEEMPMK 415
+EM +
Sbjct: 448 FQEMATR 454
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 169/392 (43%), Gaps = 57/392 (14%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENA-----LLDLYGKCDELI 169
PD F++K + + + Q+ + K L+ I NA ++ G L
Sbjct: 50 PDVRVFTFMLKYYSQI---GVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLF 106
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
AH V + DRD N ++ YA+ G ++ AR LFD+MP T+ W MISGY G+
Sbjct: 107 LAH-VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGN 165
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
EA +F M EIS R +
Sbjct: 166 EEEASTLFHVMG-----DQEIS------------------------------RNVITWTT 190
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPP 348
+I + K G + A FD+M ER VVSW+ ++ G A G + I LF++M V P
Sbjct: 191 MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQP 250
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY--GCLVDLLGRAGRLDQAL 406
++ T+ ++S+C+ G + L K D + + ++ L+D+ + G L+ A
Sbjct: 251 DETTWATVISSCSSLG--DPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAH 308
Query: 407 NIIEEMPMKP--DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE-DTGNYVLLSNIYA 463
I E++ + + W +++S+ +L A +HL P+ DT ++ + Y
Sbjct: 309 KIFEQLGVYKYRSSVPWNAMISAYARVGDLPSA----KHLFDKMPQRDTVSWNSMIAGYT 364
Query: 464 KHGR-WEDVSRMRKLIRSKSMKKTPGCSLIEV 494
++G ++ + ++I S+ +K +++ V
Sbjct: 365 QNGESFKAIKLFEEMISSEDSRKPDEVTMVSV 396
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 16/232 (6%)
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEA-LDVFRQM-QMVGIEPDEISIVSVLPACAQL 262
+F + + +T M+ Y+ IG +++ + +F+ M Q I+P+ ++ +
Sbjct: 43 IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSE 102
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
L L + D++H +R N ++ +Y K G I A +LFD+M +R V W+ +I
Sbjct: 103 SMLFLAHVLKSGYDRDHYVR-----NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 157
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
G G +A LFH M ++ N IT+ +++ A G MYFD M
Sbjct: 158 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMP----- 212
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEM----PMKPDAKIWGSLLSSCRT 430
E + + ++ + G ++ + + +M ++PD W +++SSC +
Sbjct: 213 ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSS 264
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 200/598 (33%), Positives = 308/598 (51%), Gaps = 98/598 (16%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK-EP 75
+ +L+ C + L++IHTQ + + + N L+++ I + D Y++L+F + P
Sbjct: 24 LLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISL----KDFTYSTLIFSHITPHP 79
Query: 76 NVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
N + +N M+RA T H Y L ++LY QM +T + I P+ FT PFV +CA L
Sbjct: 80 NDYAFNIMLRATTTTWHDYPLTLHLYHQM----KTLN-ISPNNFTFPFVFLACANLEEIR 134
Query: 135 LGKQIHAHVCKFGLKSH-------------------------SITE------NALLDLYG 163
+ + H V K GL + ITE N+LL Y
Sbjct: 135 MARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYA 194
Query: 164 KCDELIEAHKVFE-----------------------EMTDRDIVAW-------------- 186
K EA +VF E+ D ++ W
Sbjct: 195 KLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNS 254
Query: 187 ---NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
+ LIS Y++ G++ +R +FD MP ++W A IS Y G EA+ +F M+
Sbjct: 255 YIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKEN 314
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G++P+++++ +VL ACA +G+L+LG+ + Y L + ALI+MY KCG + A
Sbjct: 315 GVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESA 374
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLLSACA 361
++F+ M ++ SW+ +I LA+HGKA +A+ LF M + PNDITF+ LLSAC
Sbjct: 375 QRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACV 434
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G +EG FD M + KIEHY C+VDLL RAG L +A ++IE+MP KPD
Sbjct: 435 HAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTL 494
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
G+L S+C+ N++I ++ LL L+P ++GNY++ S IY W+D +RMR L+R
Sbjct: 495 GALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMREN 554
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539
+ KTPGCS IEV N+++EF+SGD L L +++ID++YE++
Sbjct: 555 GVTKTPGCSWIEVGNQLREFLSGDG--------------LTLDSIDVRNIIDLLYEEL 598
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/495 (35%), Positives = 279/495 (56%), Gaps = 42/495 (8%)
Query: 19 PIL--QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG---GDLAYASLLFKQVK 73
PIL C +L EL +I +K + +F V K+I+ C ++YA LF+ +
Sbjct: 32 PILLISKCNSLRELMQIQAYAIKSHIEDVSF-VAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
EP++ ++N+M R Y+ +L+ ++L D ILPD +T P ++K+CA
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDG-----ILPDNYTFPSLLKACAVAKAL 145
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+H K GL + L+++Y +C+++
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDV------------------------- 180
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR +FD++ +V + AMI+GY EAL +FR+MQ ++P+EI+++
Sbjct: 181 ------DSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLL 234
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL +CA LGSL+LG+WIH Y K+ + + ALI+M+ KCG ++ A +F++M +
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +WS +I ANHGKA K++ +F M+ V P++ITF+GLL+AC+HTG EG YF
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M I I+HYG +VDLL AG L+ A I+++P+ P +W LL++C +++N
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L++A E + L+ G+YV+LSN+YA++ +WE V +RK+++ + K PGCS IE
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Query: 494 VNNEVQEFVSGDDTK 508
VNN V EF SGD K
Sbjct: 475 VNNVVHEFFSGDGVK 489
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 162/325 (49%), Gaps = 12/325 (3%)
Query: 154 TENALLDLYGKCDEL-----IEAHKVFEEMTDRDIVA-WNNLISGYARLGQMKKARMLFD 207
T+N +L L KC+ L I+A+ + + D VA N + M AR LF+
Sbjct: 29 TQNPIL-LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFE 87
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
M IV + +M GY+ + E +F ++ GI PD + S+L ACA +LE
Sbjct: 88 AMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEE 147
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
G +H K L +C LI MY +C ++ A +FD++VE VV ++ +I G A
Sbjct: 148 GRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYAR 207
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
+ ++A+ LF EMQ + PN+IT + +LS+CA G + G + + H ++
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHSFCKYVK 266
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV- 446
L+D+ + G LD A++I E+M K D + W +++ + + E +++ E +
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAEKSMLMFERMRSE 325
Query: 447 -LEPEDTGNYVLLSNIYAKHGRWED 470
++P++ ++ L N + GR E+
Sbjct: 326 NVQPDEI-TFLGLLNACSHTGRVEE 349
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 5 IGALSIKELEDRFVP-------ILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMID 54
+ +L ++ LED +P +L++C + L E +++H +K L + ++ +I+
Sbjct: 113 VFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLIN 172
Query: 55 VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL 114
+ D+ A +F ++ EP V YNAMI Y + A++L+++M G +
Sbjct: 173 MYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM-----QGKYLK 227
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P++ TL V+ SCA L LGK IH + K + AL+D++ KC L +A +
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSI 287
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSY 230
FE+M +D AW+ +I YA G+ +K+ ++F++M + +++ +++ +H G
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
E F QM +S ++P+ GS+
Sbjct: 348 EEGRKYFSQM---------VSKFGIVPSIKHYGSM 373
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 272/473 (57%), Gaps = 45/473 (9%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI G L+ A LF+++ +VF + AM+ + N + A ++++M
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM-------- 303
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
P+K + ++ NA++ Y + ++ +A
Sbjct: 304 ---PEK---------------------------------NEVSWNAMIAGYVQSQQIEKA 327
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
++F++M R+ +WN +++GYA+ G + +A++LFD+MP +SW AMISGY G
Sbjct: 328 RELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSE 387
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL +F +M+ G + ++ L +CA++ +LELG+ +H K + NAL+
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALL 447
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
MY KCG I +A +F+ + E+D+VSW+T+I G A HG +A+ LF M ++ + P+D+
Sbjct: 448 AMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDV 506
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +G+LSAC+HTGF ++G+ YF+SM +++ I +HY C++DLLGRAGRLD+ALN+++
Sbjct: 507 TLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKS 566
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MP PDA WG+LL + R + + E+ A E + +EP+++G YVLLSN+YA GRW +V
Sbjct: 567 MPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREV 626
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
MR +R K +KK PG S +E+ N+ F GD + P + I+ LE L L
Sbjct: 627 REMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLE 679
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 163/324 (50%), Gaps = 23/324 (7%)
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ ++T NA++ Y ++ A KVFE+M DRD+++WN ++SGY + G + AR LF++
Sbjct: 88 RRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQ 147
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
MP +VSW AM+SG+ G EA +F QM + +EIS +L A Q G +E
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA 203
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+ + + V N L+ Y++ ++ A LFD+M RD +SW+ +I G A +
Sbjct: 204 RRLF----DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN 259
Query: 329 GKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
G +A LF E+ P D+ + ++S G +E F+ M + +
Sbjct: 260 GLLSEARRLFEEL-----PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS---- 310
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
+ ++ ++ ++++A + ++MP + + W ++++ N++ A I + +
Sbjct: 311 -WNAMIAGYVQSQQIEKARELFDQMPSR-NTSSWNTMVTGYAQCGNIDQAKILFDE---M 365
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDV 471
D ++ + + YA+ G+ E+
Sbjct: 366 PQRDCISWAAMISGYAQSGQSEEA 389
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 177/420 (42%), Gaps = 78/420 (18%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G+L+ A LF Q+ E +V +NAM+ + N A ++ QML
Sbjct: 136 GNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML--------------- 180
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ I+ N LL Y + + +A ++F+
Sbjct: 181 -----------------------------VKNEISWNGLLSAYVQNGRIEDARRLFDSKM 211
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA------ 233
D +IV+WN L+ GY R ++ AR LFD+MP +SW MI+GY G +EA
Sbjct: 212 DWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEE 271
Query: 234 ---LDVFRQMQMVG------------------IEPDEISIVSVLPACAQLGSLELGEWIH 272
DVF MV E +E+S +++ Q +E +
Sbjct: 272 LPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
R T N ++ Y +CG I+QA LFD+M +RD +SW+ +I G A G++
Sbjct: 332 ----DQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSE 387
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+A+HLF +M+R N LS+CA G + + I L
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG-NAL 446
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL-LVLEPED 451
+ + G+ G +++A ++ E++ K D W ++++ + + A+ E + + ++P+D
Sbjct: 447 LAMYGKCGSIEEAFDVFEDITEK-DIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDD 505
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 143/306 (46%), Gaps = 28/306 (9%)
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
G+C+ A VF M R V +N +ISGY + AR +F+KMP ++SW M+S
Sbjct: 74 GQCES---ALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLS 130
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
GY G+ + A +F QM E D +S ++L AQ G +E I L++
Sbjct: 131 GYVKNGNLSAARALFNQMP----EKDVVSWNAMLSGFAQNGFVEEARKIF----DQMLVK 182
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
+ N L+ Y++ G I A +LFD ++ ++VSW+ ++GG + A LF M
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRM- 241
Query: 343 RLKVPPND-ITFIGLLSACAHTGFWNEGLMYFDSMK-RDHHIEHKIEHYGCLVDLLGRAG 400
P D I++ +++ A G +E F+ + RD + + +V + G
Sbjct: 242 ----PVRDKISWNIMITGYAQNGLLSEARRLFEELPIRD------VFAWTAMVSGFVQNG 291
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSN 460
LD+A I EEMP K + W ++++ +E A E + +T ++ +
Sbjct: 292 MLDEATRIFEEMPEKNEVS-WNAMIAGYVQSQQIE---KARELFDQMPSRNTSSWNTMVT 347
Query: 461 IYAKHG 466
YA+ G
Sbjct: 348 GYAQCG 353
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 48/247 (19%)
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
+E+ + D DIV WN IS Y R GQ + A +F+ M + V++ AMISGY
Sbjct: 46 LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNN 105
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
+ A VF +M PD R + N
Sbjct: 106 KFDCARKVFEKM------PD---------------------------------RDLISWN 126
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
++ Y+K G ++ A LF+QM E+DVVSW+ ++ G A +G +A +F +M +
Sbjct: 127 VMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVK 182
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N+I++ GLLSA G + FDS ++ +I + CL+ R RLD A ++
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDS-----KMDWEIVSWNCLMGGYVRKKRLDDARSL 237
Query: 409 IEEMPMK 415
+ MP++
Sbjct: 238 FDRMPVR 244
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 278/503 (55%), Gaps = 23/503 (4%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H ++K L FL +ID + G A F + +N +I Y+
Sbjct: 32 VHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKTFGDLPNKTTRSWNTLISFYSKTGF 91
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG--KQIHAHVCKFGLKS 150
+ A NL+ +M P + + + L+ +L +Q+H G++
Sbjct: 92 FDEAHNLFDKM-----------PQRNVVSY-----NSLISGNLQWLRQVHGVAVIVGMEW 135
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+ I NAL+D YGKC E + VF M +R++V+W +++ Y R ++ +A +F MP
Sbjct: 136 NVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMVVAYTRACRLDEACRVFKDMP 195
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
VSWTA+++G+ G EA DVF+QM G+ P + VSV+ ACAQ + G+
Sbjct: 196 VKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQ 255
Query: 271 IH---MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
+H + DK+ L +CNALI+MY KCG + A LF+ RDVV+W+T+I G A
Sbjct: 256 VHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTLITGFAQ 315
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
+G +++ +F M KV PN +TF+G+LS C H G NEGL D M+R + ++ K E
Sbjct: 316 NGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDNEGLQLVDLMERQYGVKPKAE 375
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMP--MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
HY L+DLLGR RL +A+++IE++P +K +WG++L +CR + NL++A A E L
Sbjct: 376 HYALLIDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVLGACRVHGNLDLARKAAEKLF 435
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
LEPE+TG YV+L+NIYA G+W R+R +++ + ++K P CS IE+ N EFV+ D
Sbjct: 436 ELEPENTGRYVMLANIYAASGKWGGAKRIRNVMKERCLEKEPACSRIELRNARHEFVAKD 495
Query: 506 DTKPFLKDIFWLLELLALHQDRA 528
P +++I + L LH A
Sbjct: 496 KFHPQVEEICEVNSKLVLHSKDA 518
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 20/311 (6%)
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
F+I C L +H H+ K L + N L+D Y KC AHK F ++ ++
Sbjct: 15 FLISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKTFGDLPNK 74
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+WN LIS Y++ G +A LFDKMP +VS+ ++ISG L RQ+
Sbjct: 75 TTRSWNTLISFYSKTGFFDEAHNLFDKMPQRNVVSYNSLISG---------NLQWLRQVH 125
Query: 242 ----MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
+VG+E + I +++ A + G L + Y + R V +++ Y +
Sbjct: 126 GVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVFCYMPE----RNVVSWTSMVVAYTRA 181
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
+++A ++F M ++ VSW+ ++ G +G +A +F +M V P+ TF+ ++
Sbjct: 182 CRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSVI 241
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC--LVDLLGRAGRLDQALNIIEEMPMK 415
ACA G + R + Y C L+D+ + G + A N+ E PM+
Sbjct: 242 DACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAPMR 301
Query: 416 PDAKIWGSLLS 426
D W +L++
Sbjct: 302 -DVVTWNTLIT 311
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 293/540 (54%), Gaps = 43/540 (7%)
Query: 15 DRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDV-----CNSGGDLAYAS 66
++F ++ +C ++L K +H+Q++K L FL +ID+ C A+
Sbjct: 79 EKFSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDD 138
Query: 67 L--------------------------LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLY 100
L LF ++ + N+ YN++I T + + A+ +
Sbjct: 139 LPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFF 198
Query: 101 KQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLD 160
++M G L+L D+FTL ++ +C+ L +Q+H G +++ I NAL+D
Sbjct: 199 REMQNG--VGGLML-DEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALID 255
Query: 161 LYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
YGKC E + +F M ++D V+W +++ Y R ++ A +F++MP VSW A+
Sbjct: 256 AYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAAL 315
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
ISG+ G EAL+VF QM G+ P + VSVL ACA + G+ +H +
Sbjct: 316 ISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRS 375
Query: 281 ---LRRTVICNALIEMYIKCGCINQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIH 336
L + NAL++MY KCG + A LF+ M+ +DVVSW+T+I G A +G+ ++
Sbjct: 376 SDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLA 435
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
+F M + PN +TF+G+LSAC H G N GL DSM+R + ++ K HY L+DLL
Sbjct: 436 VFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLL 495
Query: 397 GRAGRLDQALNIIEEMPMKPDAKI--WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGN 454
GR RL++A+ +IE++P + I WG++L CR + NLE+A A E L LEPE+TG
Sbjct: 496 GRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGR 555
Query: 455 YVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
YV+LSNIYA GRW D +R+R +++ + +KK P S IE+ EFV+ D P + +I
Sbjct: 556 YVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKDKFHPQIGEI 615
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/483 (37%), Positives = 270/483 (55%), Gaps = 18/483 (3%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLILP--- 115
G +A A LF ++ NV +NAMI Y + A+ L+K+M +D + + I+
Sbjct: 249 GKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYI 308
Query: 116 -----DKFTLPFVIKSCAGLLCPSL--------GKQIHAHVCKFGLKSHSIT-ENALLDL 161
D+ + C + + G+ A + +H + N+++
Sbjct: 309 RVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAG 368
Query: 162 YGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
Y + + EA +F +M ++ V+WN +ISGYA+ GQM +A +F M IVSW ++I
Sbjct: 369 YSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLI 428
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
+G+ Y +AL M G +PD+ + L ACA L +L++G +H Y K+ +
Sbjct: 429 AGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYM 488
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
+ NALI MY KCG + A Q+F + D++SW+++I G A +G A+KA F +M
Sbjct: 489 NDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQM 548
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+V P+++TFIG+LSAC+H G N+GL F M D IE EHY CLVDLLGR GR
Sbjct: 549 SSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGR 608
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
L++A N + M +K +A +WGSLL +CR + NLE+ A E L LEP + NY+ LSN+
Sbjct: 609 LEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNM 668
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+A+ GRWE+V R+R L+R K K PGCS IEV N++Q F+S D K K+I +L L
Sbjct: 669 HAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSHDPAKLRPKNIQIILNTL 728
Query: 522 ALH 524
A H
Sbjct: 729 AAH 731
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 193/453 (42%), Gaps = 82/453 (18%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVT--KMIDVCNS 58
M ++G SI E + L +L K+ I + LVT MI V
Sbjct: 1 MKLKLGIRSIGEAGKHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAK 60
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RD----------- 106
+ A LF Q+ N+ +N MI Y +N++ A L+ M RD
Sbjct: 61 NARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCY 120
Query: 107 PRTGSL--------ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS----IT 154
R G L ++PDK +C + K+ + K + ++
Sbjct: 121 TRKGKLEKARELLELVPDKLD-----TACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVS 175
Query: 155 ENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI 214
N++L Y + ++ A + FE MT+R++V+WN +++GY + G + A LF+K+P
Sbjct: 176 YNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNA 235
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
VSW M+ G G AEA ++F +M P+
Sbjct: 236 VSWVTMLCGLAKYGKMAEARELFDRM----------------PS---------------- 263
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
+ V NA+I Y++ +++A +LF +M +D VSW+T+I G GK +A
Sbjct: 264 -------KNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEA 316
Query: 335 IHLFHEMQRLKVPPNDITF-IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
++++M P DIT L+S G +E F + H + + ++
Sbjct: 317 RQVYNQM-----PCKDITAQTALMSGLIQNGRIDEADQMFSRIG-----AHDVVCWNSMI 366
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
R+GR+D+ALN+ +MP+K ++ W +++S
Sbjct: 367 AGYSRSGRMDEALNLFRQMPIK-NSVSWNTMIS 398
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 10/220 (4%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI G + A+ +F+ ++E N+ +N++I + N+LY A+ M ++ +
Sbjct: 396 MISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKK-- 453
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
PD+ T + +CA L +G Q+H ++ K G + NAL+ +Y KC + A
Sbjct: 454 ---PDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSA 510
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHI 227
+VF ++ D+++WN+LISGYA G KA F++M + V++ M+S +H
Sbjct: 511 EQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHA 570
Query: 228 GSYAEALDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLE 266
G + LD+F+ M + IEP ++ ++G LE
Sbjct: 571 GLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLE 610
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 9/178 (5%)
Query: 5 IGALSIKELEDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGD 61
+G K + F L +C NL L+ ++H ILK F+ +I + G
Sbjct: 447 MGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGR 506
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
+ A +F+ ++ ++ +N++I Y N A ++QM + ++PD+ T
Sbjct: 507 VQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQM-----SSERVVPDEVTFI 561
Query: 122 FVIKSCAGLLCPSLGKQI-HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
++ +C+ + G I + F ++ + + L+DL G+ L EA M
Sbjct: 562 GMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGM 619
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 284/506 (56%), Gaps = 8/506 (1%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+PIL++ L E ++H K F+ T +D+ S G + YA +F ++
Sbjct: 114 FLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS 173
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +N MI Y L A L+++M S ++PD+ L ++ +C
Sbjct: 174 HRDVVTWNTMIERYCRFGLVDEAFKLFEEM-----KDSNVMPDEMILCNIVSACGRTGNM 228
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ I+ + + ++ + AL+ +Y + A + F +M+ R++ ++SGY
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGY 288
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
++ G++ A+++FD+ +V WT MIS Y EAL VF +M GI+PD +S+
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV+ ACA LG L+ +W+H N L I NALI MY KCG ++ +F++M R
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+VVSWS++I L+ HG+A A+ LF M++ V PN++TF+G+L C+H+G EG F
Sbjct: 409 NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 468
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM +++I K+EHYGC+VDL GRA L +AL +IE MP+ + IWGSL+S+CR +
Sbjct: 469 ASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE 528
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
LE+ A + +L LEP+ G VL+SNIYA+ RWEDV +R+++ K++ K G S I+
Sbjct: 529 LELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRID 588
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
N + EF+ GD +I+ L+
Sbjct: 589 QNGKSHEFLIGDKRHKQSNEIYAKLD 614
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 195/441 (44%), Gaps = 74/441 (16%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQ--SNFLVTKMIDVCNSGGDLAYASLLFKQVKEP-NV 77
L C++L +K++H IL+ +++ ++FL + S +L+YA +F + P
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSS--SSINLSYALNVFSSIPSPPES 76
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++N +R + + I L+ Q +R G + D+F+ ++K+ + + G
Sbjct: 77 IVFNPFLRDLSRSSEPRATI-LFYQRIR--HVGGRL--DQFSFLPILKAVSKVSALFEGM 131
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
++H K E +D+Y C + A VF+EM+ RD+V WN +I Y R G
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
L D EA +F +M+ + PDE+ + +++
Sbjct: 192 -------LVD------------------------EAFKLFEEMKDSNVMPDEMILCNIVS 220
Query: 258 ACAQLGSLELGEWIHMYCDKN------HLL-------------------------RRTVI 286
AC + G++ I+ + +N HLL R +
Sbjct: 221 ACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV 280
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
A++ Y KCG ++ A +FDQ ++D+V W+T+I +A+ +F EM +
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI 340
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
P+ ++ ++SACA+ G ++ + S + +E ++ L+++ + G LD
Sbjct: 341 KPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 407 NIIEEMPMKPDAKIWGSLLSS 427
++ E+MP + + W S++++
Sbjct: 400 DVFEKMPRR-NVVSWSSMINA 419
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 289/521 (55%), Gaps = 39/521 (7%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C L K +H +LK ++ ++D+ GD +F+++
Sbjct: 145 FAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP 204
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ +V ++ MI Y ++ A+ L+ QM R + +LP++FT V++SCA +
Sbjct: 205 KHDVIPWSFMISRYAQSNQSREAVELFGQMRR-----AFVLPNQFTFASVLQSCASIENL 259
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LGKQ+H HV K GL + NAL+D+Y KC
Sbjct: 260 QLGKQVHCHVLKVGLDGNVFVSNALMDVYAKC---------------------------- 291
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G++ + LF ++P V+W MI GY G +AL +++ M ++ E++
Sbjct: 292 ---GRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYS 348
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL ACA L ++ELG IH K + V+ NALI+MY KCG I A +FD + ER
Sbjct: 349 SVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSER 408
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +SW+ +I G + HG +A+ F MQ + PN +TF+ +LSAC++ G + G YF
Sbjct: 409 DEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYF 468
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM +D+ IE +EHY C+V LLGR+G LD+A+ +IEE+P++P+ K+W +LL +C +++
Sbjct: 469 KSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHND 528
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+++ +++ + +L ++P+D +VLLSNIYA+ RW V+ +RK +++K +KK PG S IE
Sbjct: 529 VDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIE 588
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI 534
V F GD + P +K I +LE L + ++A V D+
Sbjct: 589 NQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDL 629
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 181/394 (45%), Gaps = 38/394 (9%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H I K + F+ T +ID G + A F + ++ + M+ Y N
Sbjct: 63 LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
+ ++ L+ +M P+ FT V+K+C GL S+GK +H V K +
Sbjct: 123 FQDSLQLFAEMRMVGFN-----PNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDL 177
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
LLDLY K + + +VFEEM D++ W+ +IS YA+ Q +
Sbjct: 178 YVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSR------------ 225
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
EA+++F QM+ + P++ + SVL +CA + +L+LG+ +H
Sbjct: 226 -------------------EAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVH 266
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ K L + NAL+++Y KCG ++ + +LF ++ R+ V+W+T+I G G
Sbjct: 267 CHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGD 326
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
KA+ L+ M +V +++T+ +L ACA G S+ + + L
Sbjct: 327 KALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQ-IHSLSLKTIYDKDVVVGNAL 385
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+D+ + G + A ++ +M + D W +++S
Sbjct: 386 IDMYAKCGSIKNA-RLVFDMLSERDEISWNAMIS 418
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 160/358 (44%), Gaps = 50/358 (13%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ N + +I+ Y + ++L+ ++ R+ G + P F ++K + C
Sbjct: 3 DRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHRE---GHELNP--FVFTTILKLLVSVECA 57
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
L +HA + K G +S++ AL+D Y C + A + F+ + +D+V+W +++ Y
Sbjct: 58 ELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACY 117
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A + + ++L +F +M+MVG P+ +
Sbjct: 118 AENDR-------------------------------FQDSLQLFAEMRMVGFNPNHFTFA 146
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
VL AC L + +G+ +H K + L+++Y K G N ++F++M +
Sbjct: 147 GVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKH 206
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV+ WS +I A ++ +A+ LF +M+R V PN TF +L +CA G
Sbjct: 207 DVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLG---- 262
Query: 374 DSMKRDH------HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
K+ H ++ + L+D+ + GRLD ++ + E+P + + W +++
Sbjct: 263 ---KQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVT-WNTMI 316
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 127/310 (40%), Gaps = 54/310 (17%)
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
MP VS+ +I GY E +D+F ++ G E + ++L + EL
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+H K + ALI+ Y CG +N A Q FD + +D+VSW+ ++ A +
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI-- 386
+ ++ LF EM+ + PN TF G+L AC GL F K H K
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACI-------GLEAFSVGKSVHGCVLKTCY 173
Query: 387 ---EHYGC-LVDLLGRAGRLDQALNIIEEMP----------------------------- 413
+ G L+DL + G + L + EEMP
Sbjct: 174 EMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQ 233
Query: 414 -----MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSN----IYAK 464
+ P+ + S+L SC + NL++ H VL+ GN V +SN +YAK
Sbjct: 234 MRRAFVLPNQFTFASVLQSCASIENLQLG--KQVHCHVLKVGLDGN-VFVSNALMDVYAK 290
Query: 465 HGRWEDVSRM 474
GR ++ ++
Sbjct: 291 CGRLDNSMKL 300
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 245/376 (65%)
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
+++ N +LD Y K E+ +A +FE M +R++V+W+ ++SGY + G M+ ARMLFD+MP
Sbjct: 43 AVSWNTILDGYVKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPV 102
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI 271
+VSWT ++SGY G +A+ F QM+ G++PD+ +++S+L +CA+ G L LG+ +
Sbjct: 103 KNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRV 162
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H ++ + NAL++MY KCG +++A +F+ M ++D+VSW+ ++ GLA HG
Sbjct: 163 HTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHG 222
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
KA+ LF M++ P+ +T + +L AC H GF +EG+ YF++M+RD+ I IEHYGC
Sbjct: 223 EKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGC 282
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VDLLGR GRL +A +++ MP++P+ IWG+LL +CR ++ + +A ++ L LEP D
Sbjct: 283 MVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSD 342
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFL 511
GNY LLSNI+A G W V+ +R +++ ++K G S IEV++EV EF D + P
Sbjct: 343 PGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKPSGASSIEVDDEVHEFTVFDKSHPKS 402
Query: 512 KDIFWLLELLALHQDR 527
I+ ++ L L R
Sbjct: 403 DKIYQMINRLGLDLKR 418
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 59/330 (17%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
+ M+ GD+ A +LF ++ N+ + ++ Y L AI ++QM
Sbjct: 78 STMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEE---- 133
Query: 110 GSLILPDKFTLPFVIKSCA--GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
+ + PD T+ ++ SCA GLL LGK++H + + K NAL+D+Y KC +
Sbjct: 134 -AGLKPDDGTVISILASCAESGLL--GLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQ 190
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+ A VF M+ +D+V+WN ++ G A G +K
Sbjct: 191 VDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEK-------------------------- 224
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
AL +F M+ G PD++++V+VL AC G ++ G I + N++ R I
Sbjct: 225 -----ALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEG--IRYF---NNMERDYGIV 274
Query: 288 ------NALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
++++ + G + +A +L M VE +VV W T++G + H A+ L E
Sbjct: 275 PHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGAC----RMHNAVGLAEE 330
Query: 341 MQR--LKVPPNDITFIGLLSAC-AHTGFWN 367
+ K+ P+D LLS A G W+
Sbjct: 331 VLDCLFKLEPSDPGNYSLLSNIFASAGDWS 360
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 125/282 (44%), Gaps = 28/282 (9%)
Query: 9 SIKELEDRFVPILQSC--ENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
+K + + IL SC L+ L K++HT I + S + ++D+ G + A
Sbjct: 135 GLKPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRA 194
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F + + ++ +N M++ + A+ L+ M ++ PDK TL V+
Sbjct: 195 LSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEG-----FRPDKVTLVAVLC 249
Query: 126 SC--AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRD 182
+C AG + + + + +G+ H ++DL G+ L EA+++ + M + +
Sbjct: 250 ACVHAGFVDEGI-RYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPN 308
Query: 183 IVAWNNLISGYARLGQMKKARMLFD---KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+V W L+ + A + D K+ + +++ + + + G ++ +V Q
Sbjct: 309 VVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQ 368
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNH 279
M+ GI+ P+ A S+E+ + +H + DK+H
Sbjct: 369 MKNFGIQK---------PSGAS--SIEVDDEVHEFTVFDKSH 399
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/502 (34%), Positives = 286/502 (56%), Gaps = 39/502 (7%)
Query: 17 FVPILQSCEN--LIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L + N L+++ +K+H +I K L + T ++ + GD++ A ++F ++
Sbjct: 200 FVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLP 259
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E NV + +I Y +A+ L ++M + + + P+K T +++ C L
Sbjct: 260 EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQ-----AEVAPNKITYTSILQGCTTPLAL 314
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK++H ++ + G YG R+I N LI+ Y
Sbjct: 315 EHGKKVHRYIIQSG--------------YG-----------------REIWVVNALITMY 343
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G +K+AR LF +P+ +V+WTAM++GY +G + EA+D+FR+MQ GI+PD+++
Sbjct: 344 CKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFT 403
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S L +C+ L+ G+ IH + +AL+ MY KCG ++ A +F+QM ER
Sbjct: 404 SALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSER 463
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+VV+W+ +I G A HG+ +A+ F +M++ + P+ +TF +LSAC H G EG +F
Sbjct: 464 NVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHF 523
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM D+ I+ +EHY C VDLLGRAG L++A N+I MP +P +WG+LLS+CR +S+
Sbjct: 524 RSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSD 583
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E A E++L L+P+D G YV LSNIYA GR+ED ++R+++ + + K PG S IE
Sbjct: 584 VERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIE 643
Query: 494 VNNEVQEFVSGDDTKPFLKDIF 515
V+ +V F D + P K+I+
Sbjct: 644 VDGKVHVFHVEDKSHPEAKEIY 665
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 201/435 (46%), Gaps = 45/435 (10%)
Query: 15 DRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
D F +LQ C L L +++H ILK + + +L ++ + G L A +F
Sbjct: 97 DVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDG 156
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+++ N+ + AMI A+ + A Y+ M + PDK T ++ +
Sbjct: 157 IRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKL-----AGCKPDKVTFVSLLNAFTNPE 211
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
+G+++H + K GL+ +L+ +Y KC
Sbjct: 212 LLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKC-------------------------- 245
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G + KA+++FDK+P +V+WT +I+GY G AL++ +MQ + P++I+
Sbjct: 246 -----GDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKIT 300
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
S+L C +LE G+ +H Y ++ R + NALI MY KCG + +A +LF +
Sbjct: 301 YTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLP 360
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
RDVV+W+ ++ G A G +AI LF MQ+ + P+ +TF L++C+ F EG
Sbjct: 361 HRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKS 420
Query: 372 YFDSMKRDHHIEHKIEHY--GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
+ H + ++ Y LV + + G +D A + +M + + W ++++ C
Sbjct: 421 IHQQLV---HAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSER-NVVAWTAMITGCA 476
Query: 430 TYSNLEIAVIAMEHL 444
+ A+ E +
Sbjct: 477 QHGRCREALEYFEQM 491
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 4/218 (1%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
G EAL + M + G +L CA+L SLE G +H K+ + +
Sbjct: 75 GRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 134
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
N L+ MY KCG + A ++FD + +R++VSW+ +I + +A + M+
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194
Query: 348 PNDITFIGLLSACAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
P+ +TF+ LL+A + G ++ + K +E ++ LV + + G + +A
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDISKAQ 252
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
I +++P K + W L++ +++A+ +E +
Sbjct: 253 VIFDKLPEK-NVVTWTLLIAGYAQQGQVDVALELLEKM 289
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/483 (37%), Positives = 270/483 (55%), Gaps = 18/483 (3%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G +A A LF Q+ NV +NAMI AY N AI+L+ +M + + +
Sbjct: 247 GKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYV 306
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFG--------------LKSHSITE----NALLDL 161
+ LL + + A SI + N ++
Sbjct: 307 RMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAG 366
Query: 162 YGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
Y +C + EA +F++M +DIV+WN +++ YA++GQM A +F++M IVSW ++I
Sbjct: 367 YSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLI 426
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL 281
SG T GSY +AL F M G +PD+ + L +CA L +L++G+ +H K+
Sbjct: 427 SGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYA 486
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
+ NALI MY KCG I+ A LF + DVVSW+++I A +G +A+ LFH+M
Sbjct: 487 TDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKM 546
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
+ V P+++TF+G+LSAC+H G ++GL F M + ++IE EHY C+VDLLGRAGR
Sbjct: 547 EVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGR 606
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
L++A ++ M + +A IWG+LL +CR + NLE+A A E LL EP T NYVLLSN+
Sbjct: 607 LEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNM 666
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
A+ GRW++V+R+R+L++ K +K PG S IE+ N V F+S D P ++ +L L
Sbjct: 667 QAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSL 726
Query: 522 ALH 524
H
Sbjct: 727 TAH 729
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 164/374 (43%), Gaps = 60/374 (16%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A LF + ++ +N+M+ YT N L + +++M ++ D F +
Sbjct: 159 ARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDL 218
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
S ++I ++++ +L + + ++ EA ++F++M R++V
Sbjct: 219 NSSWEFF-----EKIP--------NPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVV 265
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
AWN +I+ Y + + +A LF +MP +SWT +I+GY +G EA + QM
Sbjct: 266 AWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN 325
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALIEMYIKCGCINQA 303
+ +++ Q ++ I N + R V+C N +I Y +CG +++A
Sbjct: 326 VAAQ----TAMISGYVQNKRMDDARQIF-----NQISIRDVVCWNTMIAGYSQCGRMDEA 376
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
LF QMV++D+VSW+T++ A G+ AI +F EM+ N +++ L+S
Sbjct: 377 LHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKE----KNIVSWNSLISGLTQN 432
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G Y D++K L+G G+ KPD +
Sbjct: 433 G------SYLDALKS--------------FMLMGHEGQ-------------KPDQSTFAC 459
Query: 424 LLSSCRTYSNLEIA 437
LSSC + L++
Sbjct: 460 GLSSCAHLAALQVG 473
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 148/312 (47%), Gaps = 43/312 (13%)
Query: 135 LGK--QIHAHVCKFGLKSH--SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
LGK QI + F +H ++T N+++ + K + +A ++F+ M R+IV+WN++I
Sbjct: 25 LGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMI 84
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+ Y ++++AR LFDKMP + SWT MI+ YT G A+A ++F ++ + + +
Sbjct: 85 AAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLF---NLLPYKWNPV 141
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+++ A+ + + L V N+++ Y + G + Q F++M
Sbjct: 142 CCNAMVAGYAKNRQFDEARRLFDAMPAKDL----VSWNSMLTGYTRNGEMRLGLQFFEEM 197
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP-PNDITFIGLLSACAHTGFWNEG 369
ERDVVSW+ ++ G G + + F K+P PN ++++ +L A G E
Sbjct: 198 AERDVVSWNLMVDGFVEVGDLNSSWEFFE-----KIPNPNTVSWVTMLCGFARFGKIAEA 252
Query: 370 LMYFDSMK---------------RDHHIEHKIE-----------HYGCLVDLLGRAGRLD 403
FD M ++ H++ I + +++ R G+LD
Sbjct: 253 RRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLD 312
Query: 404 QALNIIEEMPMK 415
+A ++ +MP +
Sbjct: 313 EARQLLNQMPYR 324
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 153/331 (46%), Gaps = 32/331 (9%)
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
S+ N + GK ++ EA KVF+ MT ++ V N++IS +A+ G++ AR LFD M
Sbjct: 13 SYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGM 72
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV-----LPACAQLGS 264
P IVSW +MI+ Y H EA +F +M + + I L L +
Sbjct: 73 PQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFN 132
Query: 265 LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
L +W V CNA++ Y K ++A +LFD M +D+VSW++++ G
Sbjct: 133 LLPYKW------------NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTG 180
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
+G+ + F EM V ++ G + G N +F+ + + +
Sbjct: 181 YTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFV----EVGDLNSSWEFFEKIPNPNTVS- 235
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ ++ R G++ +A + ++MP++ + W +++++ +++ A+ L
Sbjct: 236 ----WVTMLCGFARFGKIAEARRLFDQMPIR-NVVAWNAMIAAYVQNCHVDEAI----SL 286
Query: 445 LVLEPEDTG-NYVLLSNIYAKHGRWEDVSRM 474
+ PE ++ + N Y + G+ ++ ++
Sbjct: 287 FMEMPEKNSISWTTVINGYVRMGKLDEARQL 317
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 162/404 (40%), Gaps = 91/404 (22%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAM 83
C + E + Q++K + N +V V G + A +F+++KE N+ +N++
Sbjct: 370 CGRMDEALHLFKQMVKKDIVSWNTMVASYAQV----GQMDAAIKIFEEMKEKNIVSWNSL 425
Query: 84 IRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHV 143
I T N Y A+ + M + + PD+ T + SCA L +GKQ+H V
Sbjct: 426 ISGLTQNGSYLDALKSFMLMGHEGQK-----PDQSTFACGLSSCAHLAALQVGKQLHQLV 480
Query: 144 CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKAR 203
K G + NAL+ +Y KC + A +F+++ D+V+WN+LI+ YA G ++A
Sbjct: 481 MKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREAL 540
Query: 204 MLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLG 263
LF KM ++ G+ PDE++ V +L AC+ +
Sbjct: 541 KLFHKM-------------------------------EVEGVAPDEVTFVGILSACSHV- 568
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
G I+Q +LF MV+ + I
Sbjct: 569 ----------------------------------GLIDQGLKLFKCMVQ------AYNIE 588
Query: 324 GLANH--------GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
LA H G+A + F ++ +K+ N + LL AC G N L F +
Sbjct: 589 PLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHG--NLELAKFAA 646
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
K HK +Y L ++ AGR D+ + M K K
Sbjct: 647 EKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEK 690
>gi|108709982|gb|ABF97777.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 523
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 268/484 (55%), Gaps = 9/484 (1%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG-DLAYASLLFKQVKEPNVFLYNA 82
C ++ L+++H ++K L++ ++ + C G D AYA+ L + PN F++N
Sbjct: 45 CASMAHLRQLHAALVKSGLARDPIAASRAVAFCAGDGRDAAYAARLVRHHPRPNAFMWNT 104
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
IRA + G A+ L+ ML GS P++ T P + + A L G +H
Sbjct: 105 AIRALADGPGPGAAVALFVDML-----GSPTPPERRTFPSLFAAYARLGRAGDGAGLHGM 159
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V K GL + N+++ +Y EA + D VA N+ I AR G++ +A
Sbjct: 160 VVKLGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALARAGRVDEA 219
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R +FD MP T+ +W+AM+S Y+ +A+++F MQ G+EP+ +VSVL CA L
Sbjct: 220 RAVFDGMPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVSVLGCCASL 279
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD---VVSWS 319
G+LE G W+H Y DK+ + ++ AL++MY KCG I +A ++FD R + SW+
Sbjct: 280 GALEQGAWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWN 339
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+++ G A HG+ +A LF E++ + P+++TFI +L A H+G +E SM +
Sbjct: 340 SMMLGHAVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVLASMASE 399
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
H + +EHYGCLVD L RAGRL +A I MP+ PDA +WG+LLS CR + + E A
Sbjct: 400 HGVVPGVEHYGCLVDALARAGRLREAEGAIAAMPVAPDAAVWGALLSGCRLHGDAEAAAR 459
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A + +P D+G YVL ++ A+ G + +R +R + + K PGCS+IEV+ V
Sbjct: 460 AAREAVRCDPRDSGAYVLAASALARGGEARRGAAVRGRMREEGVGKVPGCSMIEVDGVVH 519
Query: 500 EFVS 503
EFVS
Sbjct: 520 EFVS 523
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/488 (34%), Positives = 272/488 (55%), Gaps = 27/488 (5%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPD-- 116
G + A +LF+Q+ +P V +NAMI Y N + A L+ +M R+ + + ++
Sbjct: 335 GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYA 394
Query: 117 -----------------------KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI 153
+L +C+ + G+Q+H+ K G + +S
Sbjct: 395 QNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSY 454
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
NAL+ +YGKC + +VF M +D V+WN+ I+ + ++ AR +FD M
Sbjct: 455 VCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRD 514
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
+VSWT +IS Y EA++ F+ M +P+ + +L C LGS +LG+ IH
Sbjct: 515 VVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHT 574
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
K+ + ++ NAL+ MY KCGC + + ++FD M ERD+ +W+T I G A HG +
Sbjct: 575 VAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGRE 633
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
AI ++ M+ + V PN++TF+GLL+AC+H G +EG +F SM RD+ + +EHY C+V
Sbjct: 634 AIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMV 693
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
DLLGR G + A I +MP++PD IW +LL +C+ + N EI A E L EP + G
Sbjct: 694 DLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAG 753
Query: 454 NYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKD 513
NYV+LSNIY+ G W +V+ +RK+++ + + K PGCS +++ N+V FV+GD +++
Sbjct: 754 NYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEE 813
Query: 514 IFWLLELL 521
I + L+ L
Sbjct: 814 IDYTLQDL 821
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 160/317 (50%), Gaps = 22/317 (6%)
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
L+ K E +V + +++ YT + +AI + M+ +++T +I
Sbjct: 248 LVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVER---------NEYTWSTMIA 298
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKS-HSI-TENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+ S G +I A + +G SI ++ ALL +C + EA +FE++ D +
Sbjct: 299 AL------SHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIV 352
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
V+WN +I+GY + G + +A+ LFD+MP+ +SW MI+GY G EALD+ + +
Sbjct: 353 VSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRN 412
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G+ P S+ S AC+ +G+LE G +H K + +CNALI MY KC +
Sbjct: 413 GMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYV 472
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
Q+F++M +D VSW++ I L + A H+F M V +++ ++SA A
Sbjct: 473 RQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDV----VSWTTIISAYAQA 528
Query: 364 GFWNEGLMYFDSMKRDH 380
+E + +F +M +H
Sbjct: 529 ERGDEAVEFFKTMLHEH 545
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 170/360 (47%), Gaps = 29/360 (8%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L A +F + ++ +N+MI AY N+ ML D R IL D +
Sbjct: 47 GRLREAREVFDAMPHRDIIAWNSMISAYCNS-----------GMLEDAR----ILFDAIS 91
Query: 120 LPFVIKSCAGLLC--PSLGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELIEAHKVFE 176
V ++ LL LG+ + A G+ + +++ NA++ Y + ++ A ++F+
Sbjct: 92 GGNV-RTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFD 150
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
M RD+ +WN++++GY QM A LF +MP +V+WT MISGY I + + D+
Sbjct: 151 AMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDI 210
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
FR M G PD+ + SVL A L L + E + K VI +++ +Y +
Sbjct: 211 FRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTR 270
Query: 297 -CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
++ A + FD MVER+ +WST+I L++ G+ AI ++ +P
Sbjct: 271 DASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQ----TA 326
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
LL+ A G E + F+ + + + + ++ + G +D+A + + MP +
Sbjct: 327 LLTGLARCGRITEARILFEQIP-----DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR 381
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 18/179 (10%)
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
ARLG++++AR +FD MP+ I++W +MIS Y + G +A +F + + I
Sbjct: 44 ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATI--- 100
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLL-----RRTVICNALIEMYIKCGCINQASQLFD 308
+L A+LG + D + R TV NA++ Y++ G I A +LFD
Sbjct: 101 -LLSGYARLGRV---------LDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFD 150
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
M RDV SW++++ G + + A +LF +M + + + G + H W+
Sbjct: 151 AMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWD 209
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 16/190 (8%)
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+A I + G + +A ++FD M RD+++W+++I N G A LF + V
Sbjct: 37 SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVR 96
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
I LLS A G + FD M E + +V + G + A
Sbjct: 97 TATI----LLSGYARLGRVLDARRVFDGMP-----ERNTVAWNAMVSCYVQNGDITMARR 147
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAK--- 464
+ + MP + D W S+++ Y + V A + + + ++ + Y +
Sbjct: 148 LFDAMPSR-DVTSWNSMVTG---YCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQ 203
Query: 465 HGRWEDVSRM 474
HG+ D+ RM
Sbjct: 204 HGKGWDIFRM 213
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 260/514 (50%), Gaps = 77/514 (14%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +R + A++LY QMLR P+ FT PF +KSCA L P LG Q
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDR-----PNAFTFPFALKSCAALSLPILGSQF 71
Query: 140 HAHVCK---------------------------------FGLKSHSITENALLDLYGKCD 166
H + K F + ++ NAL+ Y
Sbjct: 72 HGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNS 131
Query: 167 ELIEAHKVFEEMT---------------------------------------DRDIVAWN 187
+ EA +F +M D D+ N
Sbjct: 132 KCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVN 191
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
I+ Y + G + A+ LFD+MP ++SW AM+SGY G L+++R M M G+ P
Sbjct: 192 CFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 251
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D +++V VL +CA LG+ +G + + + NALI MY +CG + +A +F
Sbjct: 252 DPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVF 311
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D M ER +VSW+ +IGG HG A+ LF EM R + P+ F+ +LSAC+H G +
Sbjct: 312 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 371
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+GL YF MKR++ +E EHY C+VDLLGRAGRL +A +IE MP+KPD +WG+LL +
Sbjct: 372 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 431
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
C+ + N+E+A +A E ++ LEPE+ G YVLLSNIY+ + V R+R +++ K +KK P
Sbjct: 432 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 491
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
GCS +E+ V F+ GD +I+ +LE L
Sbjct: 492 GCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEEL 525
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 165/385 (42%), Gaps = 44/385 (11%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+P S NL +H LKY +V I + G + YA LF ++
Sbjct: 158 LIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKG 217
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +NAM+ Y N L + LY+ M + + PD TL V+ SCA L S+G
Sbjct: 218 LISWNAMVSGYAQNGLATNVLELYRNMDMNG-----VHPDPVTLVGVLSSCANLGAQSVG 272
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
++ + G S+ NAL+++Y +C L +A VF+ M +R +V+W +I GY
Sbjct: 273 HEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYG-- 330
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+ G+ I A+ +F++M GIEPD + V VL
Sbjct: 331 ------------------------MHGHGEI-----AVQLFKEMIRSGIEPDGTAFVCVL 361
Query: 257 PACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERD 314
AC+ G + G E+ M L + ++++ + G + +A L + M ++ D
Sbjct: 362 SACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPD 421
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
W ++G H A F + +++ P +I + LLS ++G++
Sbjct: 422 GAVWGALLGACKIHKNVELAELAFERV--IELEPENIGYYVLLSNIYSNANNSKGVLRIR 479
Query: 375 SMKRDHHIEHKIEHYGC-LVDLLGR 398
M ++ ++ + GC V+L GR
Sbjct: 480 IMMKEKKLK---KDPGCSYVELKGR 501
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 300/570 (52%), Gaps = 70/570 (12%)
Query: 6 GALSIKELEDRFVPILQSCENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
G+ ++ + + IL S ++L ++IH ++K+ F+ + ++D+ + G ++
Sbjct: 137 GSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISC 196
Query: 65 ASLLFKQVKEPNVFLYN-------------------------------AMIRAYTNNHLY 93
A +F ++ E NV +YN +MI +T N L
Sbjct: 197 ARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLD 256
Query: 94 GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI 153
AI+++++M + + D++T V+ +C G++ GKQ+HA++ + K +
Sbjct: 257 RDAIDIFREMKLEN-----LQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
+AL+D+Y KC + K A +F KM
Sbjct: 312 VASALVDMYCKCKNI-------------------------------KSAEAVFKKMTCKN 340
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
+VSWTAM+ GY G EA+ F MQ GIEPD+ ++ SV+ +CA L SLE G H
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHA 400
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
+ L+ + NAL+ +Y KCG I + +LF+++ +D V+W+ ++ G A GKA++
Sbjct: 401 RALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANE 460
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
I LF M + P+ +TFIG+LSAC+ G +G F+SM +H I +HY C++
Sbjct: 461 TIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMI 520
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
DL RAGR+++A N I +MP PDA W +LLSSCR Y N++I A E L+ L+P +T
Sbjct: 521 DLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTA 580
Query: 454 NYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKD 513
+YVLLS++YA G+WE+V+R+RK +R K ++K PGCS I+ N+V F + D + PF
Sbjct: 581 SYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQ 640
Query: 514 IFWLLELLALHQDRAKDVIDI--MYEDIGE 541
I+ LE L + V D+ + D+G+
Sbjct: 641 IYSELEKLNYKMIKEGYVPDMNSVLHDVGD 670
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 236/472 (50%), Gaps = 41/472 (8%)
Query: 15 DRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
+ + +L+ C N + K +H+ I+K L FL+ +I G + YA +F Q
Sbjct: 10 NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQ 69
Query: 72 VKEPNVFLYNAMIRAYT-----------------------NNHLYGLA--------INLY 100
+ PN++ +N ++ AY+ N+ + G A + Y
Sbjct: 70 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129
Query: 101 KQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLD 160
ML++ + +L ++ T ++ + C LG+QIH HV KFG S+ + L+D
Sbjct: 130 NLMLKNDGSFNL---NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVD 186
Query: 161 LYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
+Y K + A KVF+E+ ++++V +N LI G R G+++ ++ LF +M +SWT+M
Sbjct: 187 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSM 246
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
I+G+T G +A+D+FR+M++ ++ D+ + SVL AC + +L+ G+ +H Y +
Sbjct: 247 ITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 306
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
+ +AL++MY KC I A +F +M ++VVSW+ ++ G +G + +A+ F +
Sbjct: 307 KDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 366
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
MQ+ + P+D T ++S+CA+ EG F + + I LV L G+ G
Sbjct: 367 MQKYGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCG 425
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPE 450
++ + + E+ K D W +L+S + + E +L L+P+
Sbjct: 426 SIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPD 476
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 292/481 (60%), Gaps = 8/481 (1%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+ + +SC + ++++ + +K +F+ +I + G+LA A +F +
Sbjct: 75 FIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGML 134
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V +N++I Y + + ++L+++M + D T+ I + L
Sbjct: 135 ERDVVSWNSIICGYYQFNRFKKVLDLFREM-----QAINVRADSVTMMKAISATCFLSEW 189
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+G + ++ + G+ N L+D+YG+ + A +VF +M +++IV+WN +I GY
Sbjct: 190 EMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGY 249
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A++G + A+ LF++MP ++SWT+MI GY+ +AEA+ +F++M + ++PDEI++
Sbjct: 250 AKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVA 309
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+ L ACA LGSL+ GE +H Y K+ + + N+LI+MY KCG + +A Q+F+ M R
Sbjct: 310 TALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTR 369
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D VSW+++I GLA +G A A+++F +M + + P TF+G+L ACAH G ++G+ +F
Sbjct: 370 DSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHF 429
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM+ + + +++HYGC+VDLL R+G LD A N I++MP+ PD IW LLS+C+ + N
Sbjct: 430 KSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGN 489
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L +A I + LLVL+P + GNYVL S+ YA RW+DV ++RKL+ +++K S IE
Sbjct: 490 LVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIE 549
Query: 494 V 494
V
Sbjct: 550 V 550
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 191/419 (45%), Gaps = 69/419 (16%)
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
S L A +F Q++ P + ++N MI + + AI+ Y M GS
Sbjct: 18 SPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGS-----H 72
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
T F+ KSCA + G+ + H K G +S S NAL+ +Y EL A KVF+
Sbjct: 73 LTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDG 132
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M +RD+V+WN++I GY + + KK LD+F
Sbjct: 133 MLERDVVSWNSIICGYYQFNRFKK-------------------------------VLDLF 161
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
R+MQ + + D ++++ + A L E+G+++ Y D++ ++ + N LI+MY +
Sbjct: 162 REMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRR 221
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHG---------------------------- 329
G I+ A ++F QM E+++VSW+ +I G A G
Sbjct: 222 GMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYS 281
Query: 330 --KAH-KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
K H +A+ LF EM V P++IT LSACAH G + G D + R H I+ +
Sbjct: 282 LAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYI-RKHDIKSDV 340
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
L+D+ + G +++AL + +M + D+ W S++S E A+ + +L
Sbjct: 341 FVGNSLIDMYCKCGVVEKALQVFNDMKTR-DSVSWTSIISGLAVNGFAESALNVFDQML 398
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 187 NNLISGYARLGQ-MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
+ +I YA Q + KA +F+++ T++ W MI G + +A+ + M GI
Sbjct: 9 SEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGI 68
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+ ++ + + +CA++ + G+ + ++ K + + NALI MY+ G + A +
Sbjct: 69 QGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQK 128
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+FD M+ERDVVSW+++I G + K + LF EMQ + V + +T + +SA
Sbjct: 129 VFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSE 188
Query: 366 WNEG---LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
W G + Y D +H + + L+D+ GR G +D A + +M K + W
Sbjct: 189 WEMGDYLVKYID----EHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEK-NIVSWN 243
Query: 423 SLLSSCRTYSNLEIA 437
+++ NL A
Sbjct: 244 AMIMGYAKVGNLVAA 258
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/495 (35%), Positives = 279/495 (56%), Gaps = 42/495 (8%)
Query: 19 PIL--QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG---GDLAYASLLFKQVK 73
PIL C + EL +I +K +F TK+I+ C ++YA LF +
Sbjct: 34 PILLISKCNSERELMQIQAYAIKSHQEDVSF-NTKLINFCTESPTESSMSYARHLFDAMS 92
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
EP++ ++N++ R Y+ + NL+ ++L D +LPD +T P ++K+CA
Sbjct: 93 EPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDD-----LLPDNYTFPSLLKACAVAKAL 147
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+H K G+ + L+++Y +C+++
Sbjct: 148 EEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDV------------------------- 182
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR +FD++ +V + AMI+GY EAL +FR+MQ ++P+EI+++
Sbjct: 183 ------DAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLL 236
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL +CA LGSL+LG+WIH Y K+ + + ALI+M+ KCG ++ A +F+ M +
Sbjct: 237 SVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYK 296
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +WS +I ANHG+A ++ +F M+ V P++ITF+GLL+AC+HTG EG YF
Sbjct: 297 DTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYF 356
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M + I I+HYG +VDLLGRAG L+ A I+++P+ P +W LL++C +++N
Sbjct: 357 SWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 416
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
LE+A E +L L+ G+YV+LSN+YA++ +WE V +RK+++ + K PGCS IE
Sbjct: 417 LELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIE 476
Query: 494 VNNEVQEFVSGDDTK 508
VNN V EF SGD K
Sbjct: 477 VNNVVHEFFSGDGVK 491
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 155/334 (46%), Gaps = 48/334 (14%)
Query: 8 LSIKELEDRFVP-------ILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN 57
L ++ LED +P +L++C + L E +++H +K + + ++ +I++
Sbjct: 118 LFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYT 177
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
D+ A +F ++ EP V YNAMI Y + A++L+++M G + P++
Sbjct: 178 ECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM-----QGKNLKPNE 232
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
TL V+ SCA L LGK IH + K G + AL+D++ KC L +A +FE
Sbjct: 233 ITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFEN 292
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M +D AW+ +I YA GQ + + ++F++
Sbjct: 293 MRYKDTQAWSAMIVAYANHGQAENSMLMFER----------------------------- 323
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIK 296
M+ ++PDEI+ + +L AC+ G +E G E+ + ++ +++++ +
Sbjct: 324 --MRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGR 381
Query: 297 CGCINQASQLFDQM-VERDVVSWSTVIGGLANHG 329
G + A + D++ + + W ++ ++H
Sbjct: 382 AGHLEDAYEFIDKLPISPTPMLWRILLAACSSHN 415
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 267/473 (56%), Gaps = 42/473 (8%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G L A LF ++ +V +NAMI Y + + AI + +M
Sbjct: 201 TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQE---- 256
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ +LP+K T+ V+ +C LGK I + V G S+ NAL+D+Y KC
Sbjct: 257 -ANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKC---- 311
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+ AR LFD + ++SW MI GY+++
Sbjct: 312 ---------------------------GETDIARELFDGIEEKDVISWNTMIGGYSYLSL 344
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV---I 286
Y EAL +F M ++P++++ + +L ACA LG+L+LG+W+H Y DKN LR + +
Sbjct: 345 YEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKN--LRNSSNASL 402
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLK 345
+LI+MY KCGCI A ++F M R++ SW+ ++ G A HG A +A+ LF EM +
Sbjct: 403 WTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGL 462
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
P+DITF+G+LSAC G + G YF SM +D+ I K++HYGC++DLL RA + ++A
Sbjct: 463 FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEA 522
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
+++ M M+PD IWGSLLS+C+ + +E E L LEPE+ G +VLLSNIYA
Sbjct: 523 EILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGA 582
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
GRW+DV+R+R + K MKK PGC+ IE++ +V EF+ GD P +I+ +L
Sbjct: 583 GRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKML 635
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 241/443 (54%), Gaps = 14/443 (3%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLF---KQ 71
++ +L+ C+N+ K+IH+ I+K L+ + F+ +K+I C + GDL+YA LF +Q
Sbjct: 31 YLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQ 90
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ NVF++N++IR Y+ + +++L+ +ML + P+ T PF+ KSC
Sbjct: 91 HHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYG-----VQPNSHTFPFLFKSCTKAK 145
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
GKQ+HAH K L + +++ +Y E+ A VF++ + RD V++ LI+
Sbjct: 146 ATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALIT 205
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GY G + AR LFD++P +VSW AMISGY G + EA+ F +MQ + P++ +
Sbjct: 206 GYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKST 265
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V VL AC S ELG+WI + N + NALI+MY KCG + A +LFD +
Sbjct: 266 MVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIE 325
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E+DV+SW+T+IGG + +A+ LF M R V PND+TF+G+L ACA G + G
Sbjct: 326 EKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKW 385
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
+ ++ + L+D+ + G ++ A + M + A W ++LS +
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS-WNAMLSGFAMH 444
Query: 432 SNLEIAVIAMEHLL---VLEPED 451
+ E A+ ++ + P+D
Sbjct: 445 GHAERALALFSEMVNKGLFRPDD 467
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/497 (36%), Positives = 274/497 (55%), Gaps = 42/497 (8%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
++H IL Q FL TK+I + + G + YA +F + ++ ++++NA+ RA T
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS----LGKQIHAHVCKFG 147
+ LY +M R G + D+FT +V+K+C C GK+IHAH+ + G
Sbjct: 158 HGEEVLGLYWKM---NRIG--VESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG 212
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
SH L+D+Y AR G + A +F
Sbjct: 213 YSSHVYIMTTLVDMY-------------------------------ARFGCVDYASYVFG 241
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM--QMVGIEPDEISIVSVLPACAQLGSL 265
MP +VSW+AMI+ Y G EAL FR+M + P+ +++VSVL ACA L +L
Sbjct: 242 GMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAAL 301
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
E G+ IH Y + L + +AL+ MY +CG + ++FD+M +RDVVSW+++I
Sbjct: 302 EQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSY 361
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
HG KAI +F EM P +TF+ +L AC+H G EG F++M RDH I+ +
Sbjct: 362 GVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQ 421
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
IEHY C+VDLLGRA RLD+A ++++M +P K+WGSLL SCR + N+E+A A L
Sbjct: 422 IEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF 481
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
LEP++ GNYVLL++IYA+ W++V R++KL+ + ++K PG +EV ++ FVS D
Sbjct: 482 ALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVD 541
Query: 506 DTKPFLKDIFWLLELLA 522
+ P ++ I L LA
Sbjct: 542 EFNPLMEQIHAFLVKLA 558
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 189/406 (46%), Gaps = 62/406 (15%)
Query: 4 RIGALSIKELEDRFVP--ILQSC-------ENLIELKKIHTQILKYLLSQSNFLVTKMID 54
RIG S DRF +L++C +L++ K+IH + + S +++T ++D
Sbjct: 171 RIGVES-----DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 55 VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL 114
+ G + YAS +F + NV ++AMI Y N A+ +++M+R+ + S
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS--- 282
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P+ T+ V+++CA L GK IH ++ + GL S +AL+ +YG+C +L +V
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F+ M DRD+V+WN+LIS Y G KK A+
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKK-------------------------------AI 371
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA-LIEM 293
+F +M G P ++ VSVL AC+ G +E G+ + ++H ++ + A ++++
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDL 431
Query: 294 YIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
+ +++A+++ M E W +++G HG A + L+ P N
Sbjct: 432 LGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE-PKNAGN 490
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
++ L A W+E +KR ++ +EH G L L GR
Sbjct: 491 YVLLADIYAEAQMWDE-------VKR---VKKLLEHRG-LQKLPGR 525
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 8/287 (2%)
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
D L + + +D+D LI Y+ LG + AR +FDK TI W A+ T
Sbjct: 95 DALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALT 154
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA----QLGSLELGEWIHMYCDKNHLL 281
G E L ++ +M +G+E D + VL AC + L G+ IH + +
Sbjct: 155 LAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS 214
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
I L++MY + GC++ AS +F M R+VVSWS +I A +GKA +A+ F EM
Sbjct: 215 SHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 342 QR--LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
R PN +T + +L ACA +G + + R ++ + LV + GR
Sbjct: 275 MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR-RGLDSILPVISALVTMYGRC 333
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
G+L+ + + M + D W SL+SS + + A+ E +L
Sbjct: 334 GKLEVGQRVFDRMHDR-DVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 10/216 (4%)
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
+S +I G +A+ V Q P + + ++ C SL +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
N + + LI MY G ++ A ++FD+ +R + W+ + L G +
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS----MKRDHHIEHKIEHYG 390
+ L+ +M R+ V + T+ +L AC + LM + R + H +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH-VYIMT 221
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
LVD+ R G +D A + MP++ + W ++++
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIA 256
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 277/493 (56%), Gaps = 21/493 (4%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPR 108
T M+ ++ A LF ++ NV +N MI Y N A+ L+++M R+
Sbjct: 119 TAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVV 178
Query: 109 TGSLILP---------------DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL--KSH 151
+ + ++ D+ VI A + S +I F + +
Sbjct: 179 SWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERN 238
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
++ NA++ Y + L EA +FE M +RD+ +WN +I+G + G +++AR LF++MP
Sbjct: 239 VVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPK 298
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVF-RQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
++SWT MI+G G EAL +F R + G +P++ + VSVL AC+ L L G+
Sbjct: 299 KNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQ 358
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV--ERDVVSWSTVIGGLANH 328
+H K T + +ALI MY KCG + A ++FD + +RD+VSW+ +I A+H
Sbjct: 359 VHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHH 418
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G +AI+ F EM++ P+D+T++GLLSAC+H G EGL YFD + +D I + +H
Sbjct: 419 GYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDH 478
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
Y CLVDL GRAGRL +A IE + KP A++WG+LL+ C ++N++I A + LL +E
Sbjct: 479 YACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVE 538
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
PE+ G Y+LLSNIYA G+W + +R+R ++ K +KK PGCS IEV N V FV GD +
Sbjct: 539 PENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSH 598
Query: 509 PFLKDIFWLLELL 521
K I+ LL L
Sbjct: 599 SQSKLIYSLLRDL 611
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 148/291 (50%), Gaps = 19/291 (6%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM-PYTTI 214
N ++ K ++EA ++F+EM + D++ W +ISGY + G +++AR LFD++ +
Sbjct: 56 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNV 115
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
V+WTAM+ GY ++A +F +M + +S +++ AQ G ++ MY
Sbjct: 116 VTWTAMVGGYIRSNKISDAEKLFNEMPNKNV----VSWNTMIDGYAQNGRIDSA----MY 167
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
+ R V N ++ M +CG I +A +LFD+M ERDV+SW+ +I GL+ +G+ +A
Sbjct: 168 LFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEA 227
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVD 394
LF M V +++ +++ A +E L F+ M E + + ++
Sbjct: 228 RLLFDRMPERNV----VSWNAMITGYAQNLRLDEALDLFERMP-----ERDLPSWNTMIT 278
Query: 395 LLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
L + G L +A + EMP K + W ++++ C E A+ +L
Sbjct: 279 GLIQNGDLRRARKLFNEMP-KKNVISWTTMITGCVQEGESEEALKIFSRML 328
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 146/289 (50%), Gaps = 20/289 (6%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
PD T VI +G + + ++ + K + +T A++ Y + +++ +A K+
Sbjct: 81 PDVITWTTVI---SGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKL 137
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F EM ++++V+WN +I GYA+ G++ A LF+KMP +VSW ++S G EA
Sbjct: 138 FNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEAR 197
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALIEM 293
+F +M E D IS +++ ++ G ++ + + + R V+ NA+I
Sbjct: 198 RLFDRMP----ERDVISWTAMIAGLSKNGRIDEARLLF-----DRMPERNVVSWNAMITG 248
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
Y + +++A LF++M ERD+ SW+T+I GL +G +A LF+EM + N I++
Sbjct: 249 YAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPK----KNVISW 304
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+++ C G E L F M + + + G V +LG L
Sbjct: 305 TTMITGCVQEGESEEALKIFSRMLSTNGAK---PNQGTFVSVLGACSNL 350
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 146/332 (43%), Gaps = 44/332 (13%)
Query: 42 LSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYK 101
L N ++T +I GDL A LF ++ + NV + MI A+ ++
Sbjct: 270 LPSWNTMITGLI----QNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFS 325
Query: 102 QMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL 161
+ML + + P++ T V+ +C+ L G+Q+H + K + + +AL+++
Sbjct: 326 RML----STNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINM 381
Query: 162 YGKCDELIEAHKVFEE--MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA 219
Y KC EL A K+F++ + RD+V+WN +I+ YA
Sbjct: 382 YSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYA------------------------- 416
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKN 278
H G EA++ F++M+ G +PD+++ V +L AC+ G +E G ++
Sbjct: 417 ------HHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDR 470
Query: 279 HLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS-WSTVIGGLANHGKAHKAIHL 337
+L R L+++ + G + +A +++ + W ++ G H
Sbjct: 471 SILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQA 530
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
++ ++ P N T++ L + A TG W E
Sbjct: 531 AKKLLEVE-PENAGTYLLLSNIYASTGKWREA 561
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 56/300 (18%)
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D ++ N +I+ ++ G++ +AR LFD+M +++WT +ISGY G EA +F
Sbjct: 49 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLF-- 106
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
D+ + V A++ YI+
Sbjct: 107 ------------------------------------DRVDAKKNVVTWTAMVGGYIRSNK 130
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
I+ A +LF++M ++VVSW+T+I G A +G+ A++LF +M V +++ ++S
Sbjct: 131 ISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV----VSWNTVMSM 186
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
A G E FD M E + + ++ L + GR+D+A + + MP + +
Sbjct: 187 LAQCGRIEEARRLFDRMP-----ERDVISWTAMIAGLSKNGRIDEARLLFDRMPER-NVV 240
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE-DTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
W ++++ L+ A+ E + PE D ++ + ++G D+ R RKL
Sbjct: 241 SWNAMITGYAQNLRLDEALDLFERM----PERDLPSWNTMITGLIQNG---DLRRARKLF 293
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 56/289 (19%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ-- 71
FV +L +C NL L +++H I K + S F+V+ +I++ + G+L A +F
Sbjct: 340 FVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGM 399
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ ++ +N +I AY +H YG AIN +K+M + S PD T ++ +C+
Sbjct: 400 TSQRDLVSWNGIIAAYA-HHGYGKEAINFFKEMRK-----SGFKPDDVTYVGLLSACS-- 451
Query: 131 LCPSLGKQIHAHVCKFGLK---------SHSITEN---ALLDLYGKCDELIEAHKVFEEM 178
HA + + GLK S + E+ L+DL G+ L EA E +
Sbjct: 452 ---------HAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERL 502
Query: 179 -TDRDIVAWNNLISG-----YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
T W L++G ++G+ + A+ L + P ++ + + Y G + E
Sbjct: 503 ETKPSARVWGALLAGCNVHANVKIGK-QAAKKLLEVEPENA-GTYLLLSNIYASTGKWRE 560
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNH 279
A V +M+ G++ P C+ +E+G +H++ DK+H
Sbjct: 561 AARVRLKMKDKGLKKQ--------PGCSW---IEVGNRVHVFVVGDKSH 598
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 289/537 (53%), Gaps = 9/537 (1%)
Query: 2 AARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSG 59
A + GA I + + V + C + L ++ +L + T M+ V N
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
DL LL + YNAMI Y N Y A+ + ++M+ S I D+FT
Sbjct: 235 FDLG-EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMV-----SSGIELDEFT 288
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
P VI++CA LGKQ+HA+V + S +N+L+ LY KC + EA +FE+M
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+D+V+WN L+SGY G + +A+++F +M I+SW MISG G E L +F
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ G EP + + + +CA LG+ G+ H K NALI MY KCG
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ +A Q+F M D VSW+ +I L HG +A+ ++ EM + + P+ IT + +L+A
Sbjct: 468 VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H G ++G YFDSM+ + I +HY L+DLL R+G+ A ++IE +P KP A+
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE 587
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IW +LLS CR + N+E+ +IA + L L PE G Y+LLSN++A G+WE+V+R+RKL+R
Sbjct: 588 IWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMR 647
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
+ +KK CS IE+ +V F+ D + P + ++ L+ L R V D +
Sbjct: 648 DRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSF 704
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 205/421 (48%), Gaps = 68/421 (16%)
Query: 10 IKELEDRFVPILQSC-----ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
++ + +R+ L+ C +L + +H I+ + ++ ++IDV +L Y
Sbjct: 8 VRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNY 67
Query: 65 ASLLFKQVKEPN----------------------VF-----------LYNAMIRAYTNNH 91
A LF ++ EP+ VF +YNAMI +++N+
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK----QIHAHVCKFG 147
AINL+ +M + PD FT V+ AGL + + Q HA K G
Sbjct: 128 DGYSAINLFCKMKHEG-----FKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSG 179
Query: 148 LKSHSITENALLDLYGKCDE----LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKAR 203
+ NAL+ +Y KC L A KVF+E+ ++D +W +++GY + G
Sbjct: 180 AGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGE 239
Query: 204 MLFDKMPYT-TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
L + M +V++ AMISGY + G Y EAL++ R+M GIE DE + SV+ ACA
Sbjct: 240 ELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATA 299
Query: 263 GSLELGEWIHMYCDKNHLLRRTVIC----NALIEMYIKCGCINQASQLFDQMVERDVVSW 318
G L+LG+ +H Y +LRR N+L+ +Y KCG ++A +F++M +D+VSW
Sbjct: 300 GLLQLGKQVHAY-----VLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSW 354
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ ++ G + G +A +F EM+ N ++++ ++S A GF EGL F MKR
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKE----KNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 379 D 379
+
Sbjct: 411 E 411
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 172/472 (36%), Positives = 264/472 (55%), Gaps = 44/472 (9%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI G+L A LF++ +VF + AM+ Y N + A ++ M
Sbjct: 160 MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM-------- 211
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
P+K +S++ NA++ Y +C + +A
Sbjct: 212 ---PEK---------------------------------NSVSWNAIIAGYVQCKRMDQA 235
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
++FE M +++ +WN +I+GYA+ G + +AR FD+MP +SW A+I+GY G
Sbjct: 236 RELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGE 295
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL +F +M+ G + + S L CA++ +LELG+ +H K L + NAL+
Sbjct: 296 EALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALL 355
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
MY KCG I+ A +F+ + E++VVSW+T+I G A HG +A+ LF M++ + P+D+
Sbjct: 356 VMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDV 415
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +G+LSAC+HTG ++G YF SM +D+ I +HY C++DLLGRAGRLD A N+++
Sbjct: 416 TMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 475
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MP +PDA WG+LL + R + N E+ A + + +EP+++G YVLLSN+YA GRW DV
Sbjct: 476 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDV 535
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
RMR +R + +KK PG S +EV N++ F GD P I+ LE L L
Sbjct: 536 GRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDL 587
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 155/325 (47%), Gaps = 39/325 (12%)
Query: 46 NFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR 105
+FL + C +L A LLF Q+ E +V +NAM+ Y N A ++ +M
Sbjct: 30 DFLERHDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM-- 87
Query: 106 DPRTGSLILPDKFTLPFVIKSCAGLLCPSL-GKQIHAHVCKFGLKS--HSITENALLDLY 162
P K ++ S G+L + +I F K+ I+ N ++ Y
Sbjct: 88 ---------PCKNSI-----SWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGY 133
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
K + L++A +F+ M +RD V+WN +ISGYA+ G++ +A+ LF++ P + +WTAM+S
Sbjct: 134 VKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVS 193
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
GY G EA VF M E + +S +++ Q + D+ L
Sbjct: 194 GYVQNGMLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRM----------DQARELF 239
Query: 283 RTVIC------NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
+ C N +I Y + G I QA FD+M +RD +SW+ +I G A G +A+H
Sbjct: 240 EAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALH 299
Query: 337 LFHEMQRLKVPPNDITFIGLLSACA 361
LF EM+R N TF LS CA
Sbjct: 300 LFVEMKRDGERLNRSTFTSTLSTCA 324
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 37/255 (14%)
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
++ NA+L Y + + EA ++F+EM ++ ++WN +++ Y + G+++ AR LF+
Sbjct: 62 VSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADW 121
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL------- 265
++SW M+ GY +A +F +M E DE+S +++ AQ G L
Sbjct: 122 ELISWNCMMGGYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYAQNGELLEAQRLF 177
Query: 266 ------ELGEWIHMYCD--KNHLL------------RRTVICNALIEMYIKCGCINQASQ 305
++ W M +N +L + +V NA+I Y++C ++QA +
Sbjct: 178 EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARE 237
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND-ITFIGLLSACAHTG 364
LF+ M ++V SW+T+I G A +G +A + F M P D I++ +++ A +G
Sbjct: 238 LFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRM-----PQRDSISWAAIIAGYAQSG 292
Query: 365 FWNEGLMYFDSMKRD 379
+ E L F MKRD
Sbjct: 293 YGEEALHLFVEMKRD 307
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 30/244 (12%)
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+ G R ++ AR+LFD+MP +VSW AM+SGY G EA ++F +M +
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC----KNS 92
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT-----VICNALIEMYIKCGCINQAS 304
IS +L A Q G +E D L + N ++ Y+K + A
Sbjct: 93 ISWNGMLAAYVQNGRIE---------DARRLFESKADWELISWNCMMGGYVKRNRLVDAR 143
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHT 363
+FD+M ERD VSW+T+I G A +G+ +A LF E P D+ T+ ++S
Sbjct: 144 GIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE-----SPVRDVFTWTAMVSGYVQN 198
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G +E FD M + + + ++ + R+DQA + E MP + + W +
Sbjct: 199 GMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNT 252
Query: 424 LLSS 427
+++
Sbjct: 253 MITG 256
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L +C + L K++H +++K L ++ ++ + G++ A ++F+ ++
Sbjct: 316 FTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE 375
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E V +N MI Y + A+ L++ M +TG ILPD T+ V+ +C+
Sbjct: 376 EKEVVSWNTMIAGYARHGFGKEALMLFESM---KKTG--ILPDDVTMVGVLSACSHTGLV 430
Query: 134 SLGKQ-IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNL-- 189
G + ++ +G+ ++S ++DL G+ L +A + + M + D W L
Sbjct: 431 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 490
Query: 190 ---ISGYARLGQMKKARMLFDKMP 210
I G LG+ K A+M+F+ P
Sbjct: 491 ASRIHGNTELGE-KAAKMIFEMEP 513
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 249/388 (64%), Gaps = 2/388 (0%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
N +L Y E+ EA +VF+ M +RD+V+WN +I GYA G++ AR +F+ M
Sbjct: 110 NVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAF 169
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
SW++M+S YT +AL+++R+M+ + PD ++VSVL AC+ +G+L +G +H +
Sbjct: 170 SWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFV 229
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
+ N + + ALI+MY KCG I + ++F M +DV++WS++I GLANHG H A+
Sbjct: 230 ESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDAL 289
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
LF M + PN++TFIG+L +C H G ++G YF SM H + K++HYGC+VDL
Sbjct: 290 SLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDL 349
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGR+G +++A +I +MP +PDA IW +LL +CR Y N+E+A AM L VL+P G+Y
Sbjct: 350 LGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHY 409
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
VLLSNIYA+ WE V+ MR+ +R + +++ PG S IE N + EF+SGD + P K+I+
Sbjct: 410 VLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIY 469
Query: 516 WLL-ELL-ALHQDRAKDVIDIMYEDIGE 541
+L E++ L Q K + ++ +DI E
Sbjct: 470 KMLGEMMDRLRQAGYKPMTGLVLQDIDE 497
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 148/330 (44%), Gaps = 46/330 (13%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G++ A +F + + + F +++M+ AYT A+ L+++M + + PD T
Sbjct: 151 GEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREM-----RAACVNPDCTT 205
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ V+ +C+ + ++G ++H V G++ AL+D+Y KC ++ + +VF M
Sbjct: 206 MVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMP 265
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+D++ W+++I G A G+ H +AL +F +
Sbjct: 266 VKDVLTWSSMIIGLAN--------------------------HGFGH-----DALSLFSR 294
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCG 298
M G++P+E++ + VL +C LG + G+ H + V ++++ + G
Sbjct: 295 MLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSG 354
Query: 299 CINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHE-MQRLKV--PPNDITFI 354
I +A QL M E D V W ++G + +K + + E M +L+V P D ++
Sbjct: 355 HIEEAKQLIRDMPFEPDAVIWRALLGAC----RIYKNVEVAEEAMAKLRVLDPHADGHYV 410
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
L + A W EG+ R I+
Sbjct: 411 LLSNIYAQANSW-EGVAEMRRTLRRERIQR 439
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V +L +C ++ L ++H + + L T +ID+ GD+ + +F +
Sbjct: 206 MVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMP 265
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +++MI N+ A++L+ +ML + + P++ T V+ SC L
Sbjct: 266 VKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEG-----LQPNEVTFIGVLISCTHLGLV 320
Query: 134 SLGKQIHAHVCKF-GLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
S GK+ + + G+ ++DL G+ + EA ++ +M + D V W L+
Sbjct: 321 SDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLG 380
Query: 192 G 192
Sbjct: 381 A 381
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 187/544 (34%), Positives = 285/544 (52%), Gaps = 60/544 (11%)
Query: 6 GALSIKELEDRFVPILQSCENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
G L++ + + +L S + ++L ++IH QI+K+ F+ + ++D+ G ++
Sbjct: 132 GVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSV 191
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM--------------------- 103
AS +F +V+E NV +YN MI + + + L+ M
Sbjct: 192 ASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLE 251
Query: 104 ------LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENA 157
RD R + + D++T V+ +C GL GK+IH + + G + +A
Sbjct: 252 AEAMDLFRDMRQEGMAM-DQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSA 310
Query: 158 LLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
L+D+Y KC + + A +F +M +VSW
Sbjct: 311 LVDMYCKCRSV-------------------------------RYAEAVFKRMANKNVVSW 339
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
TAM+ GY G EA+ VF MQ GIEPD+ ++ SV+ +CA L SLE G H
Sbjct: 340 TAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALV 399
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ L+ + NALI +Y KCG I ++QLFD+M RD VSW+ ++ G A GKA++ I L
Sbjct: 400 SGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDL 459
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F M + P+ +TFI +LSAC+ G G YF+SM +DH I +HY C++DL G
Sbjct: 460 FERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFG 519
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
RAGRL++A N I +MP PD+ W +LLSSCR Y N EI A E LL L+P++ Y+L
Sbjct: 520 RAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYIL 579
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWL 517
LS+IYA G+W +V+++R+ +R K +K PG S I+ ++V F + D + PF I+
Sbjct: 580 LSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAE 639
Query: 518 LELL 521
LE L
Sbjct: 640 LEKL 643
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 235/471 (49%), Gaps = 41/471 (8%)
Query: 24 CE--NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYN 81
CE N + KK+H I+K L + FL +I+ + G++ YA +F ++ +PN F +N
Sbjct: 16 CETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWN 75
Query: 82 AMIRAYTN----------------------NHL------YGL---AINLYKQMLRDPRTG 110
M+ AY+ N L YG A+ Y M++D G
Sbjct: 76 TMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKD---G 132
Query: 111 SLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIE 170
L L ++ T ++ + C LG+QIH + KFG ++ ++L+D+Y K +
Sbjct: 133 VLNL-NRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSV 191
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
A +VF+E+ +R++V +N +I+G R G +K ++ LF M +SWT MI+G G
Sbjct: 192 ASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLE 251
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
AEA+D+FR M+ G+ D+ + SVL AC L +L+ G+ IH ++ + +AL
Sbjct: 252 AEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSAL 311
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND 350
++MY KC + A +F +M ++VVSW+ ++ G +G + +A+ +F +MQR + P+D
Sbjct: 312 VDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDD 371
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
T ++S+CA+ EG + I I L+ L G+ G ++ + + +
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHCQALVSGLISF-ITVSNALITLYGKCGSIEDSNQLFD 430
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPEDTGNYVLLS 459
EM + D W +L+S + + E +LV L+P+ +LS
Sbjct: 431 EMSFR-DEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLS 480
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 127/256 (49%), Gaps = 5/256 (1%)
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
K C + K++H + K + N L++ Y K + A VF++M +
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+WN ++S Y++ G + + +F MP VSW ++ISGY GS EA+ + M G
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 245 I-EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
+ + I+ ++L + G ++LG IH K + ++L++MY K G ++ A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
SQ+FD++ ER+VV ++T+I GL G + LFH M+ + I++ +++
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKE----RDSISWTTMITGLIQN 248
Query: 364 GFWNEGLMYFDSMKRD 379
G E + F M+++
Sbjct: 249 GLEAEAMDLFRDMRQE 264
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 297/519 (57%), Gaps = 11/519 (2%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA 63
++G + + + + + C + + K + ++ S N +++ + C DLA
Sbjct: 173 KLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQF--DLA 230
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
A LF Q+ +P++ +N++I Y + A+ + ML+ S + PDKFTL V
Sbjct: 231 LA--LFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK----SSSLKPDKFTLGSV 284
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE--EMTDR 181
+ +CA LGKQIHAH+ + + NAL+ +Y K + AH++ E
Sbjct: 285 LSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSL 344
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+++A+ +L+ GY ++G + AR +FD + + +V+WTAMI GY G ++AL +FR M
Sbjct: 345 NVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMI 404
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
G +P+ ++ +VL + L SL+ G+ +H + + + NALI MY + G I
Sbjct: 405 REGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIK 464
Query: 302 QASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A ++F+ + RD ++W+++I LA HG ++AI LF +M R+ + P+ IT++G+LSAC
Sbjct: 465 DARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSAC 524
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
H G +G YF+ MK H+IE HY C++DLLGRAG L++A N I MP++PD
Sbjct: 525 THVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVA 584
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
WGSLLSSCR + +++A +A E LL+++P ++G Y+ L+N + G+WED +++RK ++
Sbjct: 585 WGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKD 644
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
K++KK G S +++ N+V F D P I+ ++
Sbjct: 645 KAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMIS 683
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 193/424 (45%), Gaps = 52/424 (12%)
Query: 44 QSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM 103
++ F ++ G+L A +F ++ +P+ + MI Y + L+ A++ + +M
Sbjct: 77 KTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM 136
Query: 104 LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
+ S I P +FT V+ SCA +GK++H+ V K G N+LL++Y
Sbjct: 137 V-----SSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYA 191
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
KC + + A VF+ M +D WN +IS + + Q A LFD+M IVSW ++I+G
Sbjct: 192 KCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITG 251
Query: 224 YTHIGSYAEALDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
Y H G AL+ F M + ++PD+ ++ SVL ACA SL+LG+ IH + + +
Sbjct: 252 YCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDI 311
Query: 283 RTVICNALIEMYIKCGC---------------------------------INQASQLFDQ 309
+ NALI MY K G I+ A +FD
Sbjct: 312 AGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDS 371
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
+ RDVV+W+ +I G A +G A+ LF M R PN+ T +LS +
Sbjct: 372 LKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVIS-------S 424
Query: 370 LMYFDSMKRDHHIEHKIEHYG------CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
L D K+ H + ++E L+ + R+G + A I + D W S
Sbjct: 425 LASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTS 484
Query: 424 LLSS 427
++ S
Sbjct: 485 MILS 488
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 174/363 (47%), Gaps = 38/363 (10%)
Query: 133 PSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
P +G+ IHA + K GL+ + N LL+LY K +AH++F+EM + +WN ++S
Sbjct: 28 PFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILS 87
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
+A+ G + AR +FD++P VSWT MI GY H+G + A+ F +M GI P + +
Sbjct: 88 AHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFT 147
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VL +CA +L++G+ +H + K + N+L+ MY KCG A +FD+M
Sbjct: 148 FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMR 207
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+D +W+T+I + A+ LF +M P+ +++ +++ H G+ L
Sbjct: 208 LKDTSTWNTMISMHMQFCQFDLALALFDQM----TDPDIVSWNSIITGYCHQGYDIRALE 263
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
F M ++ +KPD GS+LS+C
Sbjct: 264 TFSFM--------------------------------LKSSSLKPDKFTLGSVLSACANR 291
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNY-VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+L++ H++ + + G L ++YAK G E R+ ++ + S+ S
Sbjct: 292 ESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTS 351
Query: 491 LIE 493
L++
Sbjct: 352 LLD 354
>gi|357126462|ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 582
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 154/366 (42%), Positives = 244/366 (66%), Gaps = 1/366 (0%)
Query: 158 LLDLYGKCDELIE-AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
++D YGK ++ A ++F+E +RD+V W ++I GYAR G+M +AR LF++MP ++S
Sbjct: 211 MIDAYGKRSGGVDRARELFDETPNRDLVCWCSMIDGYARQGRMDEARALFEEMPERNVIS 270
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W+ ++ GY G +EAL++F++M GI+PD ++ V ACAQLG+LE G W+H Y +
Sbjct: 271 WSIVVDGYVRCGEPSEALELFQRMLRCGIKPDRVAAVGAFTACAQLGALEQGRWLHSYLE 330
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
K +L V+ ALI+MY+KCG ++ +F+ M ++ VV+W+ +I GL H A+
Sbjct: 331 KKKVLFDVVVQTALIDMYMKCGRLDLGKLIFESMPDKSVVTWNVMIIGLGTHSCGLHAVK 390
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF++M+ P +D++ + +L+AC H G +EGL F M++D ++ K+EHYG LVDLL
Sbjct: 391 LFYQMEAEGAPIDDLSVLAVLTACTHAGLISEGLGIFHRMRKDFGMDPKVEHYGALVDLL 450
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV 456
GRAG LD A + IE MPM+P ++WGSLL++CR++ +E+A +++E L L +D G YV
Sbjct: 451 GRAGHLDHARHAIETMPMEPTPELWGSLLAACRSHRCVELAELSVERLASLGADDFGVYV 510
Query: 457 LLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFW 516
LLSNIYA G W+ V R+R+L+ ++ MKK G S+IEV+ + EFV+G + ++
Sbjct: 511 LLSNIYADEGMWDGVFRIRRLMSAEGMKKDIGRSVIEVDGQTHEFVNGGSSHSCKDEVHL 570
Query: 517 LLELLA 522
+L+ L+
Sbjct: 571 MLQNLS 576
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 143/339 (42%), Gaps = 50/339 (14%)
Query: 51 KMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTG 110
MID G + A LF+++ E NV ++ ++ Y A+ L+++MLR
Sbjct: 242 SMIDGYARQGRMDEARALFEEMPERNVISWSIVVDGYVRCGEPSEALELFQRMLR----- 296
Query: 111 SLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIE 170
I PD+ +CA L G+ +H+++ K + + + AL+D+Y KC L
Sbjct: 297 CGIKPDRVAAVGAFTACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYMKCGRLDL 356
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
+FE M D+ +V WN +I G TH
Sbjct: 357 GKLIFESMPDKSVVTWNVMIIGLG------------------------------THSCGL 386
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNA 289
A+ +F QM+ G D++S+++VL AC G + G I K+ + V A
Sbjct: 387 -HAVKLFYQMEAEGAPIDDLSVLAVLTACTHAGLISEGLGIFHRMRKDFGMDPKVEHYGA 445
Query: 290 LIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFH-EMQRL-KV 346
L+++ + G ++ A + M +E W +++ ++H+ + L ++RL +
Sbjct: 446 LVDLLGRAGHLDHARHAIETMPMEPTPELWGSLLAAC----RSHRCVELAELSVERLASL 501
Query: 347 PPNDITFIGLLSAC-AHTGFWN-----EGLMYFDSMKRD 379
+D LLS A G W+ LM + MK+D
Sbjct: 502 GADDFGVYVLLSNIYADEGMWDGVFRIRRLMSAEGMKKD 540
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 105/276 (38%), Gaps = 54/276 (19%)
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+ARL +R D P+ T++ A S AL F M+ +EPD +
Sbjct: 66 FARLLPGPASR---DAFPWNTLIRLHA-------PASPRNALAYFACMRRAAVEPDAYTF 115
Query: 253 VSVLPACAQLGSLEL------------------GEWIHMYCDK----------NHLLRRT 284
+VL ACA G L L + YC +H R
Sbjct: 116 PAVLKACA-CGVLGLPVHAEAVRTGMDGDLFTRNALVSFYCRIGDCRSGRKVFDHGARDL 174
Query: 285 VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH-GKAHKAIHLFHEMQR 343
V N+++ Y+ CG + A +LFD M RD SW+T+I G +A LF E
Sbjct: 175 VSWNSMVAGYVACGELELAQELFDGMPLRDAFSWATMIDAYGKRSGGVDRARELFDE--- 231
Query: 344 LKVPPND-ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
P D + + ++ A G +E F+ M E + + +VD R G
Sbjct: 232 --TPNRDLVCWCSMIDGYARQGRMDEARALFEEMP-----ERNVISWSIVVDGYVRCGEP 284
Query: 403 DQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLE 435
+AL + + M +KPD ++C LE
Sbjct: 285 SEALELFQRMLRCGIKPDRVAAVGAFTACAQLGALE 320
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 18 VPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V +C L L++ +H+ + K + + T +ID+ G L L+F+ + +
Sbjct: 307 VGAFTACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYMKCGRLDLGKLIFESMPD 366
Query: 75 PNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLL 131
+V +N MI H GL A+ L+ QM + G+ I D ++ V+ +C AGL+
Sbjct: 367 KSVVTWNVMIIGL-GTHSCGLHAVKLFYQMEAE---GAPI--DDLSVLAVLTACTHAGLI 420
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
LG H FG+ AL+DL G+ L A E M
Sbjct: 421 SEGLGI-FHRMRKDFGMDPKVEHYGALVDLLGRAGHLDHARHAIETM 466
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 185/518 (35%), Positives = 285/518 (55%), Gaps = 13/518 (2%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
SC ++ +K+ ++ K + T MI DL A +F+ + E +NA
Sbjct: 204 SCSAMVSARKLFDEMPK----RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNA 259
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
MI Y + + A+ L ++M I D T +I +CA + +GKQ+HA+
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLG-----IQFDDITYTTIISACANVGSFQMGKQVHAY 314
Query: 143 VCKFGLK-SHSI---TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+ K L +HS NAL+ LY K +++ EA K+F M R+I+ WN ++SGY G+
Sbjct: 315 ILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGR 374
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
M++A+ F++MP +++ T MISG G E L +F+QM++ G EP + + L A
Sbjct: 375 MEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTA 434
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
C+ LG+LE G +H + NA+I MY KCG + A +F M D+VSW
Sbjct: 435 CSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSW 494
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+++I L HG KAI LF +M + V P+ ITF+ +L+AC+H G +G YF+SM
Sbjct: 495 NSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLE 554
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+ I +HY +VDL RAG A +I+ MP KP A +W +LL+ CR + N+++ +
Sbjct: 555 SYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGI 614
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
A E L L P++ G YVLLSNIYA GRW +V+++RKL+R ++++K P CS IEV N+V
Sbjct: 615 EAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKV 674
Query: 499 QEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
F+ DD P + ++ LE L L + + D +
Sbjct: 675 HVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKF 712
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 199/429 (46%), Gaps = 69/429 (16%)
Query: 7 ALSIKELEDRFVPILQSCE-----NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD 61
AL I+ L +R+ LQ C + + +H ++ + +++++ +
Sbjct: 4 ALDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSN 63
Query: 62 LAYASLLFKQVKEPNVF---------------------------------LYNAMIRAYT 88
L YA LF+++ P+ YNAMI Y
Sbjct: 64 LVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYA 123
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK-----QIHAHV 143
+N A+ L++ M RD PD FT V+ + L +G Q+H V
Sbjct: 124 HNGDGHSALELFRAMRRDD-----FRPDDFTFTSVLSA----LVLFVGNEQQCGQMHCAV 174
Query: 144 CKFGLKS-HSITENALLDLYGK--------CDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
K G+ S NALL +Y K C ++ A K+F+EM RD + W +I+GY
Sbjct: 175 VKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYV 234
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
R + AR +F+ M +W AMISGY H G + EAL + R+M+ +GI+ D+I+ +
Sbjct: 235 RNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTT 294
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC----NALIEMYIKCGCINQASQLFDQM 310
++ ACA +GS ++G+ +H Y KN L C NALI +Y K +++A ++F M
Sbjct: 295 IISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAM 354
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
R++++W+ ++ G N G+ +A F EM N +T ++S A GF +EGL
Sbjct: 355 PVRNIITWNAILSGYVNAGRMEEAKSFFEEMP----VKNLLTLTVMISGLAQNGFGDEGL 410
Query: 371 MYFDSMKRD 379
F M+ D
Sbjct: 411 KLFKQMRLD 419
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 282/507 (55%), Gaps = 36/507 (7%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F+P + +L + K+IH IL++ ++ FL + +ID+ D+ A +FKQ +
Sbjct: 180 FLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVD 239
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ + A+I Y N L A+ +++ +L + + P+ TL V+ +CAGL +LG
Sbjct: 240 IVVCTAIISGYVLNGLNNDALEIFRWLLEEKMS-----PNAVTLASVLPACAGLATLNLG 294
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K++HA++ K GL +A++D+Y KC
Sbjct: 295 KELHANILKHGLDERRHVGSAIMDMYAKC------------------------------- 323
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G++ A +F +MP V W A+I+ + G EA+D+FRQM G+ D +SI + L
Sbjct: 324 GRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAAL 383
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA L +L G+ IH + K +ALI+MY KCG ++ A +FD M E++ V
Sbjct: 384 SACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEV 443
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+++I +HG ++ LFH+M + P+ +TF+ +LSAC H G ++G+ YF M
Sbjct: 444 SWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCM 503
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
++ I ++EHY C+VDL GRAGRL++A I+ MP PD +WG+LL +CR + N+E+
Sbjct: 504 TEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVEL 563
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A +A LL L+PE++G YVLLSN++A G+W V ++R L++ + ++K PG S IEVN
Sbjct: 564 AEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNK 623
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLAL 523
FV+ D + P I+ +L L L
Sbjct: 624 TTHMFVAADGSHPESAQIYSVLNNLLL 650
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 173/382 (45%), Gaps = 38/382 (9%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
F+ + +I + G + A LF ++ + L+N M+ + A+ +++ M R+
Sbjct: 8 FVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDM-RN 66
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
+T P+ T V+ CA G Q+H V G + NAL+ +Y K
Sbjct: 67 CQTK----PNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK-- 120
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
GQ+ A LF+ MP T +V+W MI+G+
Sbjct: 121 -----------------------------FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQ 151
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
G EA +F +M G+ PD I+ S LP+ + SL+ G+ IH Y ++ + +
Sbjct: 152 NGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFL 211
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
+ALI++Y KC + A ++F Q D+V + +I G +G + A+ +F + K+
Sbjct: 212 KSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKM 271
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
PN +T +L ACA N G ++ + H ++ + ++D+ + GRLD A
Sbjct: 272 SPNAVTLASVLPACAGLATLNLGKELHANILK-HGLDERRHVGSAIMDMYAKCGRLDLAY 330
Query: 407 NIIEEMPMKPDAKIWGSLLSSC 428
I MP K DA W +++++C
Sbjct: 331 QIFRRMPEK-DAVCWNAIITNC 351
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 177/496 (35%), Positives = 275/496 (55%), Gaps = 52/496 (10%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ IL++C L ++IHTQ+LK + ++ + +ID+ G L +A +F+++K
Sbjct: 441 YPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK 500
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V + AMI YT + + A+NL+K+M I D I +CAG+
Sbjct: 501 ENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQG-----IKSDNIGFASAISACAGIQAL 555
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+QIHA C L G D D+ N L+S Y
Sbjct: 556 DQGRQIHAQSC----------------LSGYSD---------------DLSIGNALVSLY 584
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR G++++A FD++ VSW +++SG+ G + EAL++F QM G+E + +
Sbjct: 585 ARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFG 644
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S + A A + ++ +G+ IH K T + NALI +Y KCG I
Sbjct: 645 SAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI------------- 691
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +SW+++I G + HG +A+ LF +M++L V PN +TF+G+LSAC+H G +EG+ YF
Sbjct: 692 DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYF 751
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM H++ K EHY C+VDLLGR+G L +A +EEMP++PDA +W +LLS+C + N
Sbjct: 752 RSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKN 811
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
++I A HLL LEP+D+ YVL+SN+YA G+W+ R R++++ + +KK PG S +E
Sbjct: 812 IDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVE 871
Query: 494 VNNEVQEFVSGDDTKP 509
V+N V F +GD P
Sbjct: 872 VDNSVHAFFAGDQNHP 887
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 210/482 (43%), Gaps = 95/482 (19%)
Query: 12 ELEDR-FVPILQSCE-NLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS 66
E ++R F +L+ C N + + +IH + + S F+ +ID+ G L+ A
Sbjct: 160 EFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK 219
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
+F+ +K + + AMI + N A+ L+ Q+ V+ +
Sbjct: 220 KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI-------------------VLSA 260
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
C + GKQ+H V K G S + NAL+ LY + L A ++F M+ RD V++
Sbjct: 261 CTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSY 320
Query: 187 NNLISGYARLGQMKKARMLFDKM----PYTTIVSWTAMISGYTHIG---------SYA-- 231
N+LISG A+ G + +A LF KM V+ +++S +G SYA
Sbjct: 321 NSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIK 380
Query: 232 ----------------------------------------EALDVFRQMQMVGIEPDEIS 251
++ +F QMQ+ GI P++ +
Sbjct: 381 AGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFT 440
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
S+L C LG+ +LGE IH K + + LI+MY K G ++ A ++F ++
Sbjct: 441 YPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK 500
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E DVVSW+ +I G H K +A++LF EMQ + ++I F +SACA ++G
Sbjct: 501 ENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG-- 558
Query: 372 YFDSMKRDHHIEHKIEHYG-------CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
R H + + Y LV L R G++ +A +++ K + W SL
Sbjct: 559 ------RQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVS-WNSL 611
Query: 425 LS 426
+S
Sbjct: 612 VS 613
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 180/392 (45%), Gaps = 64/392 (16%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
I+P++FT P ++K+C L LG+QIH V K G + + + L+D+Y K +L A
Sbjct: 434 IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHAL 493
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
K+F + + D+V+W +I+G YT + E
Sbjct: 494 KIFRRLKENDVVSWTAMIAG-------------------------------YTQHDKFTE 522
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
AL++F++MQ GI+ D I S + ACA + +L+ G IH + I NAL+
Sbjct: 523 ALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVS 582
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
+Y +CG + +A FDQ+ +D VSW++++ G A G +A+++F +M + + N T
Sbjct: 583 LYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFT 642
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD--------- 403
F +SA A+ G M R + + E L+ L + G +D
Sbjct: 643 FGSAVSAAANIANVRIGKQ-IHGMIRKTGYDSETEVSNALITLYAKCGTIDDISWNSMIT 701
Query: 404 ---------QALNIIEEMP---MKPDAKIWGSLLSSCRTYSNLEIAV-----IAMEHLLV 446
+AL + E+M + P+ + +LS+C ++ + ++ H LV
Sbjct: 702 GYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLV 761
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
+PE +Y + ++ + G +SR ++ +
Sbjct: 762 PKPE---HYACVVDLLGRSGL---LSRAKRFV 787
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 207/476 (43%), Gaps = 81/476 (17%)
Query: 32 KIHTQILKYLL-----SQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+ ++Q +LL S+S + K+ID + GDL A +F ++ ++ +N +
Sbjct: 78 RANSQTFLWLLEGCLNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNT 137
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG-LLCPSLGKQIHAHVCK 145
+ L G L+++ML + D+ V++ C+G + +QIHA
Sbjct: 138 FIAERLMGRVPGLFRRMLTKN-----VEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTIT 192
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
G +S + N L+DLY K G + A+ +
Sbjct: 193 SGFESSTFICNPLIDLYFKN-------------------------------GFLSSAKKV 221
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
F+ + VSW AMISG + G EA+ +F Q+ VL AC ++
Sbjct: 222 FENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFF 267
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
E G+ +H K T +CNAL+ +Y + G ++ A Q+F M +RD VS++++I GL
Sbjct: 268 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A G ++A+ LF +M P+ +T LLSACA G G F S +
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQ-FHSYAIKAGMTSD 386
Query: 386 IEHYGCLVDL----------------LGRAGRLDQALNIIEEMPMK---PDAKIWGSLLS 426
I G L+DL G+ L+++ I +M ++ P+ + S+L
Sbjct: 387 IVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILK 446
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGN-YV--LLSNIYAKHGRWEDVSRMRKLIR 479
+C T ++ H VL+ N YV +L ++YAKHG+ + ++ + ++
Sbjct: 447 TCTTLGATDLG--EQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK 500
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 280/506 (55%), Gaps = 39/506 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +LQ C ++ +L KIH IL + + K+++ C + G LAYA L+F ++ P
Sbjct: 9 LSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNP 68
Query: 76 NVFLYNAMIRAYTNNH--LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+N+MIR ++ + L AI Y ML + S PD +T F++K+C
Sbjct: 69 QTPAWNSMIRGFSQSPSPLQLQAIVFYNHML----SASHARPDTYTFSFLLKACEEAKEE 124
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+++H + +FG D+D+V NLI Y
Sbjct: 125 GKCREVHGFIIRFGY-------------------------------DQDVVLCTNLIRSY 153
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G ++ A +F++MP +VSW +MIS Y G + EAL ++ QM++ + D ++V
Sbjct: 154 AGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLV 213
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L +CA +G+L +G +H + + L+ + NALI+MY KCG + A +F+ M +R
Sbjct: 214 SLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKR 273
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV +W+++I G HG+ +AI F M V PN ITF+GLL C+H G EG+ YF
Sbjct: 274 DVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYF 333
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M + +++ I+HYGC+VDL GRAG+L +AL +I P + D +W +LL SC+ + N
Sbjct: 334 HMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRN 393
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+EI +AM +L+ L G+ VLLS IYA+ + V+RMRKLI+S+ +K TPG S IE
Sbjct: 394 VEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIE 453
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
V ++V FV D + P ++I+ LE
Sbjct: 454 VGDQVHRFVVDDKSHPDSREIYRKLE 479
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 185/517 (35%), Positives = 285/517 (55%), Gaps = 13/517 (2%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAM 83
C ++ +K+ ++ K + T MI DL A +F+ + E +NAM
Sbjct: 205 CSAMVSARKLFDEMPK----RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAM 260
Query: 84 IRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHV 143
I Y + + A+ L ++M R + D T +I +CA + +GKQ+HA++
Sbjct: 261 ISGYVHCGCFQEALTLCRKM----RFLGIQF-DDITYTTIISACANVGSFQMGKQMHAYI 315
Query: 144 CKFGLK-SHSI---TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
K L +HS NAL+ LY K +++ EA K+F M R+I+ WN ++SGY G+M
Sbjct: 316 LKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRM 375
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
++A+ F++MP +++ T MISG G E L +F+QM++ G EP + + L AC
Sbjct: 376 EEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTAC 435
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
+ LG+LE G +H + NA+I MY KCG + A +F M D+VSW+
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++I L HG KAI LF +M + V P+ ITF+ +L+AC+H G +G YF+SM
Sbjct: 496 SMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES 555
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
+ I +HY +VDL RAG A +I+ MP KP A +W +LL+ CR + N+++ +
Sbjct: 556 YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIE 615
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
A E L L P++ G YVLLSNIYA GRW DV+++RKL+R ++++K P CS IEV N+V
Sbjct: 616 AAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVH 675
Query: 500 EFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
F+ DD P + ++ LE L L + + D +
Sbjct: 676 VFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKF 712
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 197/425 (46%), Gaps = 61/425 (14%)
Query: 7 ALSIKELEDRFVPILQSCE-----NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD 61
AL I+ L +R+ LQ C + + +H ++ + +++++ +
Sbjct: 4 ALDIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSN 63
Query: 62 LAYASLLFKQVKEPNVF---------------------------------LYNAMIRAYT 88
+ YA LF+++ P+ YNAMI Y
Sbjct: 64 VVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYA 123
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC-PSLGKQIHAHVCKFG 147
+N A+ L++ M RD PD FT V+ + + Q+H V K G
Sbjct: 124 HNGDGHSALELFRAMRRDD-----FRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTG 178
Query: 148 LKS-HSITENALLDLYGK--------CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+ S NALL +Y K C ++ A K+F+EM RD + W +I+GY R
Sbjct: 179 MGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDD 238
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ AR +F+ M +W AMISGY H G + EAL + R+M+ +GI+ D+I+ +++ A
Sbjct: 239 LNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISA 298
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVIC----NALIEMYIKCGCINQASQLFDQMVERD 314
CA +GS ++G+ +H Y KN L C NALI +Y K +++A ++F M R+
Sbjct: 299 CANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRN 358
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+++W+ ++ G N G+ +A F EM N +T ++S A GF +EGL F
Sbjct: 359 IITWNAILSGYVNAGRMEEAKSFFEEMP----VKNLLTLTVMISGLAQNGFGDEGLKLFK 414
Query: 375 SMKRD 379
M+ D
Sbjct: 415 QMRLD 419
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 302/584 (51%), Gaps = 82/584 (14%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+ L D+F +LQ C ++ +LK+IH Q+L + + N + K+ D+ D AYAS+ F
Sbjct: 29 QALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADL----KDFAYASVFFS 84
Query: 71 QVKEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ +P + +N MIR + + LA+ Y +M G + P+ T PF+ +C+
Sbjct: 85 NILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRM---KFLG--LKPNNLTYPFLFIACSN 139
Query: 130 LLCPSLGKQIHAHVCKFGLK-----SHS--------------------------ITENAL 158
LL G+ H V + GL SHS ++ N++
Sbjct: 140 LLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSM 199
Query: 159 LDLYGKCDELIEAHKVFEEMT----------------------DRDIVAW---------- 186
+ Y K EA +F EM D + W
Sbjct: 200 ISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKM 259
Query: 187 -------NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+ LI Y + G + AR +FD M V+W AMI+GY G EA+ +F+
Sbjct: 260 TLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQD 319
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+M PD+I+++ +L ACA +G+L+LG+ + +Y + + AL++MY KCG
Sbjct: 320 MRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGS 379
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLL 357
++ A ++F M +++ VSW+ +I LA HG+A +A+ LF M + V PNDITF+G+L
Sbjct: 380 LDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVL 439
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
SAC H G +EG F M + KIEHY C+VDL RAG L++A + + MP KPD
Sbjct: 440 SACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPD 499
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
I G+LL +C+ N++I+ M+ LL LEP ++GNYV+ S +YA RW+D +RMR L
Sbjct: 500 EVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRML 559
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
++ K + KTPGCS I++N+++ EF +GD +I +L+LL
Sbjct: 560 MKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLL 603
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 279/501 (55%), Gaps = 40/501 (7%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L C L +LK+ IH I L+ ++++ G L A LF ++
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
++ + +I Y+ + A+ L+ +ML P++FTL ++K+
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLG-----FQPNEFTLSSLLKASGTGPSD 222
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+HA K+G + ++LLD+Y
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMY------------------------------- 251
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR M++A+++F+ + +VSW A+I+G+ G + +F QM G EP +
Sbjct: 252 ARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYS 311
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV ACA GSLE G+W+H + K+ I N LI+MY K G I A ++F ++V++
Sbjct: 312 SVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQ 371
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+++I G A HG +A+ LF +M + KV PN+ITF+ +L+AC+H+G +EG YF
Sbjct: 372 DIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF 431
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ MK+ H IE ++ H+ +VDLLGRAGRL++A IEEMP+KP A +WG+LL SCR + N
Sbjct: 432 ELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKN 490
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+++ V A E + L+P D+G +VLLSNIYA GR D +++RK+++ +KK P CS +E
Sbjct: 491 MDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVE 550
Query: 494 VNNEVQEFVSGDDTKPFLKDI 514
+ NEV FV+ DD+ P ++I
Sbjct: 551 IENEVHVFVANDDSHPMREEI 571
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 144/313 (46%), Gaps = 35/313 (11%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P++ ++ C L G+ IHAH+ + + N +L++Y KC L EA +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F++M +D+V+W LISGY++ GQ +EAL
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQA-------------------------------SEAL 191
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+F +M +G +P+E ++ S+L A S G +H + K + ++L++MY
Sbjct: 192 ALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMY 251
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
+ + +A +F+ + ++VVSW+ +I G A G+ + LF +M R P T+
Sbjct: 252 ARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYS 311
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-CLVDLLGRAGRLDQALNIIEEMP 413
+ +ACA +G +G + + I + G L+D+ ++G + A + +
Sbjct: 312 SVFTACASSGSLEQGKWVHAHVIKSG--GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL- 368
Query: 414 MKPDAKIWGSLLS 426
+K D W S++S
Sbjct: 369 VKQDIVSWNSIIS 381
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+EP+ +L C L L+ G IH + + V+ N ++ MY KCG + +A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
LFD+M +D+VSW+ +I G + G+A +A+ LF +M L PN+ T LL A TG
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASG-TG 219
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+ + + + + L+D+ R + +A I + K + W +L
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNAL 278
Query: 425 LS 426
++
Sbjct: 279 IA 280
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 280/506 (55%), Gaps = 39/506 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +LQ C ++ +L KIH IL + + K+++ C + G LAYA L+F ++ P
Sbjct: 27 LSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNP 86
Query: 76 NVFLYNAMIRAYTNNH--LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+N+MIR ++ + L AI Y ML + S PD +T F++K+C
Sbjct: 87 QTPAWNSMIRGFSQSPSPLQLQAIVFYNHML----SASHARPDTYTFSFLLKACEEAKEE 142
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+++H + +FG D+D+V NLI Y
Sbjct: 143 GKCREVHGFIIRFGY-------------------------------DQDVVLCTNLIRSY 171
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G ++ A +F++MP +VSW +MIS Y G + EAL ++ QM++ + D ++V
Sbjct: 172 AGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLV 231
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L +CA +G+L +G +H + + L+ + NALI+MY KCG + A +F+ M +R
Sbjct: 232 SLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKR 291
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV +W+++I G HG+ +AI F M V PN ITF+GLL C+H G EG+ YF
Sbjct: 292 DVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYF 351
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M + +++ I+HYGC+VDL GRAG+L +AL +I P + D +W +LL SC+ + N
Sbjct: 352 HMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRN 411
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+EI +AM +L+ L G+ VLLS IYA+ + V+RMRKLI+S+ +K TPG S IE
Sbjct: 412 VEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIE 471
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
V ++V FV D + P ++I+ LE
Sbjct: 472 VGDQVHRFVVDDKSHPDSREIYRKLE 497
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 270/485 (55%), Gaps = 39/485 (8%)
Query: 26 NLIELKKIHTQILKYLLSQS---NFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNA 82
+L + ++H QILK + N + GDL YA L+ + N F +N
Sbjct: 5 SLSQAMQLHAQILKSPDPKKQTRNLTPLFTFAALSPAGDLTYAHLILNSLSTQNSFFHNT 64
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
MIRAY+ A++L+ ML P + PDKFT PF++KSCA L P +GKQ+H
Sbjct: 65 MIRAYSQTPDPTQALHLFLSMLCQPTSPR---PDKFTYPFLLKSCARLKQPRVGKQLHGL 121
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
+ K GL+S N L+ +Y C G+ +A
Sbjct: 122 IYKSGLESDRYVSNGLIHMYSSC-------------------------------GKSGRA 150
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
+F KM +VSWT+MI G+ EA+ +F +M G+EP+E ++VSVL ACA
Sbjct: 151 YKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADA 210
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
G++ +G + ++ + + ALI+MY KCG I A ++FD +V +DV +W+ +I
Sbjct: 211 GAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMI 270
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
GLANHG +A+ LF +M+ + P++ T +LSAC + G+++EG YF+SM + I
Sbjct: 271 SGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGI 330
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
+ I+HYGC+VDLL R G LD+A I +MP++PD +W +L+ + + + +++ + M+
Sbjct: 331 KPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDIDRSEQLMK 390
Query: 443 H--LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQE 500
LL ++ +D G+YVLL N+YA G+W D ++MR+L+ K + K PGCS IEV+ V E
Sbjct: 391 DRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLVHE 450
Query: 501 FVSGD 505
F +GD
Sbjct: 451 FAAGD 455
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 182/519 (35%), Positives = 293/519 (56%), Gaps = 48/519 (9%)
Query: 44 QSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM 103
QS F+ T+++++ + GD++ + F Q+ + +V+ +N+MI AY +N + AI + Q+
Sbjct: 49 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQL 108
Query: 104 LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
L S I PD +T P V+K+C L+ G++IH K G + + +L+ +Y
Sbjct: 109 L----LVSEIRPDFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNVFVAASLIHMYS 161
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISG------------------------------- 192
+ A +F++M RD+ +WN +ISG
Sbjct: 162 RFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVS 221
Query: 193 --------YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
YA+LG + A +F+ +P ++SW +I+GY G +EA++V++ M+
Sbjct: 222 ILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK 281
Query: 245 -IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
I P++ + VS+LPA A +G+L+ G IH K +L + LI++Y KCG + A
Sbjct: 282 EIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDA 341
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
LF Q+ + V+W+ +I HG A K + LF EM V P+ +TF+ LLSAC+H+
Sbjct: 342 MSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHS 401
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
GF EG F M+ ++ I+ ++HYGC+VDLLGRAG L+ A + I++MP++PDA IWG+
Sbjct: 402 GFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGA 460
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL +CR + N+E+ A + L ++ ++ G YVLLSNIYA G+WE V ++R L R + +
Sbjct: 461 LLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGL 520
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
KKTPG S IEVN +V F +G+ + P K+I+ L +L
Sbjct: 521 KKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLT 559
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 271/473 (57%), Gaps = 45/473 (9%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI G L+ A LF+++ +VF + AM+ + N + A ++++M
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM-------- 303
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
P+K + ++ NA++ Y + ++ +A
Sbjct: 304 ---PEK---------------------------------NEVSWNAMIAGYVQSQQIEKA 327
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
++F++M R+ +WN +++GYA+ G + +A++LFD+MP +SW AMISGY G
Sbjct: 328 RELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSE 387
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL +F +M+ G + ++ L +CA++ +LELG+ +H K + NAL+
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALL 447
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
MY KCG I +A +F+ + E+D+VSW+T+I G A HG +A+ LF M ++ + P+D+
Sbjct: 448 AMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDV 506
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +G+LSAC+HTG ++G+ YF+SM +++ I +HY C++DLLGRAGRLD+ALN+++
Sbjct: 507 TLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKS 566
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MP PDA WG+LL + R + + E+ A E + +EP+++G YVLLSN+YA GRW +V
Sbjct: 567 MPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREV 626
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
MR +R K +KK PG S +E+ N+ F GD + P + I+ LE L L
Sbjct: 627 REMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLE 679
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 163/324 (50%), Gaps = 23/324 (7%)
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ ++T NA++ Y ++ A KVFE+M DRD+++WN ++SGY + G + AR LF++
Sbjct: 88 RRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQ 147
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
MP +VSW AM+SG+ G EA +F QM + +EIS +L A Q G +E
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA 203
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+ + + V N L+ Y++ ++ A LFD+M RD +SW+ +I G A +
Sbjct: 204 RRLF----DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN 259
Query: 329 GKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
G +A LF E+ P D+ + ++S G +E F+ M + +
Sbjct: 260 GLLSEARRLFEEL-----PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS---- 310
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
+ ++ ++ ++++A + ++MP + + W ++++ N++ A I + +
Sbjct: 311 -WNAMIAGYVQSQQIEKARELFDQMPSR-NTSSWNTMVTGYAQCGNIDQAKILFDE---M 365
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDV 471
D ++ + + YA+ G+ E+
Sbjct: 366 PQRDCISWAAMISGYAQSGQSEEA 389
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 177/420 (42%), Gaps = 78/420 (18%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G+L+ A LF Q+ E +V +NAM+ + N A ++ QML
Sbjct: 136 GNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML--------------- 180
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ I+ N LL Y + + +A ++F+
Sbjct: 181 -----------------------------VKNEISWNGLLSAYVQNGRIEDARRLFDSKM 211
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA------ 233
D +IV+WN L+ GY R ++ AR LFD+MP +SW MI+GY G +EA
Sbjct: 212 DWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEE 271
Query: 234 ---LDVFRQMQMVG------------------IEPDEISIVSVLPACAQLGSLELGEWIH 272
DVF MV E +E+S +++ Q +E +
Sbjct: 272 LPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
R T N ++ Y +CG I+QA LFD+M +RD +SW+ +I G A G++
Sbjct: 332 ----DQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSE 387
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+A+HLF +M+R N LS+CA G + + I L
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG-NAL 446
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL-LVLEPED 451
+ + G+ G +++A ++ E++ K D W ++++ + + A+ E + + ++P+D
Sbjct: 447 LAMYGKCGSIEEAFDVFEDITEK-DIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDD 505
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 143/306 (46%), Gaps = 28/306 (9%)
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
G+C+ A VF M R V +N +ISGY + AR +F+KMP ++SW M+S
Sbjct: 74 GQCES---ALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLS 130
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
GY G+ + A +F QM E D +S ++L AQ G +E I L++
Sbjct: 131 GYVKNGNLSAARALFNQMP----EKDVVSWNAMLSGFAQNGFVEEARKIF----DQMLVK 182
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
+ N L+ Y++ G I A +LFD ++ ++VSW+ ++GG + A LF M
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRM- 241
Query: 343 RLKVPPND-ITFIGLLSACAHTGFWNEGLMYFDSMK-RDHHIEHKIEHYGCLVDLLGRAG 400
P D I++ +++ A G +E F+ + RD + + +V + G
Sbjct: 242 ----PVRDKISWNIMITGYAQNGLLSEARRLFEELPIRD------VFAWTAMVSGFVQNG 291
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSN 460
LD+A I EEMP K + W ++++ +E A E + +T ++ +
Sbjct: 292 MLDEATRIFEEMPEKNEVS-WNAMIAGYVQSQQIE---KARELFDQMPSRNTSSWNTMVT 347
Query: 461 IYAKHG 466
YA+ G
Sbjct: 348 GYAQCG 353
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 48/247 (19%)
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
+E+ + D DIV WN IS Y R GQ + A +F+ M + V++ AMISGY
Sbjct: 46 LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNN 105
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
+ A VF +M PD R + N
Sbjct: 106 KFDCARKVFEKM------PD---------------------------------RDLISWN 126
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
++ Y+K G ++ A LF+QM E+DVVSW+ ++ G A +G +A +F +M +
Sbjct: 127 VMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVK 182
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N+I++ GLLSA G + FDS ++ +I + CL+ R RLD A ++
Sbjct: 183 NEISWNGLLSAYVQNGRIEDARRLFDS-----KMDWEIVSWNCLMGGYVRKKRLDDARSL 237
Query: 409 IEEMPMK 415
+ MP++
Sbjct: 238 FDRMPVR 244
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 301/584 (51%), Gaps = 82/584 (14%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+ L D+F +LQ C ++ +LK+IH Q+L + + N + K+ D+ D AYAS+ F
Sbjct: 29 QALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADL----KDFAYASVFFS 84
Query: 71 QVKEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ +P + +N MIR + + LA+ Y +M G + P+ T PF+ +C+
Sbjct: 85 NILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRM---KFLG--LKPNNLTYPFLFIACSN 139
Query: 130 LLCPSLGKQIHAHVCKFGLK-----SHS--------------------------ITENAL 158
LL G+ H V + GL SHS ++ N++
Sbjct: 140 LLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSM 199
Query: 159 LDLYGKCDELIEAHKVFEEMT----------------------DRDIVAW---------- 186
+ Y K EA +F EM D + W
Sbjct: 200 ISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKM 259
Query: 187 -------NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+ LI Y + G + AR +FD M V+W AMI+GY G EA+ +F+
Sbjct: 260 TLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQD 319
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+M PD+I+++ +L ACA +G+L+LG+ + +Y + + AL++MY KCG
Sbjct: 320 MRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGS 379
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLL 357
++ A ++F M ++ VSW+ +I LA HG+A +A+ LF M + V PNDITF+G+L
Sbjct: 380 LDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVL 439
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
SAC H G +EG F M + KIEHY C+VDL RAG L++A + + MP KPD
Sbjct: 440 SACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPD 499
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
I G+LL +C+ N++I+ M+ LL LEP ++GNYV+ S +YA RW+D +RMR L
Sbjct: 500 EVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRML 559
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
++ K + KTPGCS I++N+++ EF +GD +I +L+LL
Sbjct: 560 MKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLL 603
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/440 (39%), Positives = 252/440 (57%), Gaps = 62/440 (14%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK----------------------- 149
+ P+ +T P ++K C + G++IHA + KFG +
Sbjct: 6 VAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDAR 65
Query: 150 --------SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
S +T N+++D Y K E+ A ++FEEM +RD+ +WN++I+GY G M
Sbjct: 66 AMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTA 125
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM--------------------- 240
A LF+KMP+ IVSW MI GY + + A ++F M
Sbjct: 126 AEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDY 185
Query: 241 --------QMVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNAL 290
+M+G P+E ++VSVL ACA LG L+ G+WIH Y N ++ V+ AL
Sbjct: 186 DECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTAL 245
Query: 291 IEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND 350
+ MY KCG ++ A +FD+M R VVSW+++I G HG+A KA+ +F +M++ PND
Sbjct: 246 LTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPND 305
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
TFI +LSACAH+G EG YFD M+R + IE K+EHYGC+VDLLGRAG + +I
Sbjct: 306 ATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIR 365
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
+MPM+ +WG+LLS+CRT+SN E+A I + L+ LEP D G Y+LLSNIYA G+W+D
Sbjct: 366 KMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDD 425
Query: 471 VSRMRKLIRSKSMKKTPGCS 490
V +RK+++ + + KT G S
Sbjct: 426 VEIVRKMMKERGLTKTTGLS 445
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 280/512 (54%), Gaps = 42/512 (8%)
Query: 17 FVPILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+ IL++C +L E K IH Q++K ++ + L +++V G YA +F ++
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V + A+I + YG + ++ QML + P+ +T +++SC+ L
Sbjct: 254 ERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFN-----PNMYTFISILRSCSSLSDV 307
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LGKQ+HA + K L + AL+D+Y K L +A +F + RD+ A
Sbjct: 308 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFA-------- 359
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
WT +++GY G +A+ F QMQ G++P+E ++
Sbjct: 360 -----------------------WTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLA 396
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S L C+++ +L+ G +H K + +AL++MY KCGC+ A +FD +V R
Sbjct: 397 SSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSR 456
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D VSW+T+I G + HG+ KA+ F M P+++TFIG+LSAC+H G EG +F
Sbjct: 457 DTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHF 516
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+S+ + + I IEHY C+VD+LGRAG+ + + IEEM + + IW ++L +C+ + N
Sbjct: 517 NSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGN 576
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E A L LEPE NY+LLSN++A G W+DV+ +R L+ ++ +KK PGCS +E
Sbjct: 577 IEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVE 636
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQ 525
VN +V F+S D + P +++I L+L LHQ
Sbjct: 637 VNGQVHVFLSHDGSHPKIREIH--LKLQDLHQ 666
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 157/337 (46%), Gaps = 46/337 (13%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P+ +T ++K+CA + GK IH V K G+
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKSGI-------------------------- 222
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
+ D WN+L++ YA+ G A +F ++P +VSWTA+I+G+ G Y L
Sbjct: 223 -----NPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGL 276
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+F QM G P+ + +S+L +C+ L ++LG+ +H KN L + AL++MY
Sbjct: 277 RIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMY 336
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
K + A +F+++++RD+ +W+ ++ G A G+ KA+ F +MQR V PN+ T
Sbjct: 337 AKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLA 396
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG------CLVDLLGRAGRLDQALNI 408
LS C+ + DS ++ H + K G LVD+ + G ++ A +
Sbjct: 397 SSLSGCSR-------IATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA-EV 448
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+ + + D W +++ + A+ A E +L
Sbjct: 449 VFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 12/246 (4%)
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W++L++ Y + ++ AR + ++MP + W +S EA+ +F M+ I
Sbjct: 27 WSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRI 86
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
++ S++ A A LG GE IH K +I NA + MY+K + Q
Sbjct: 87 RLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQ 146
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
F M+ ++ S + ++ G + + + ++ PN TFI +L CA G
Sbjct: 147 FFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGD 206
Query: 366 WNE-----GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
NE G + + D H+ + LV++ + G + A + E+P + D
Sbjct: 207 LNEGKAIHGQVIKSGINPDSHL------WNSLVNVYAKCGSANYACKVFGEIPER-DVVS 259
Query: 421 WGSLLS 426
W +L++
Sbjct: 260 WTALIT 265
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
KN + + + ++L+ +Y+KC + A Q+ ++M +DV W+ + + +A+
Sbjct: 17 KNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQ 76
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTG 364
LF+ M+ ++ N F L+SA A G
Sbjct: 77 LFYLMRHTRIRLNQFIFASLISAAASLG 104
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 296/537 (55%), Gaps = 50/537 (9%)
Query: 12 ELEDRF----VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYA 65
EL +F + +L+ C+++ E K++H ILK L +F + ++ C + G + YA
Sbjct: 24 ELNAKFNVQGLSLLKRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYA 83
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F+Q++EP F YN MIR N+ A+ LY +ML I PD FT PFV+K
Sbjct: 84 CSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERG-----IEPDNFTYPFVLK 138
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+C+ L G QIHAHV K GL+ D+
Sbjct: 139 ACSLLGALKEGVQIHAHVFKAGLEG-------------------------------DVFV 167
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
N LI+ Y + G ++ A ++F++M ++ SW+++I + + + E L + M G
Sbjct: 168 QNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGR 227
Query: 246 EPDEISI-VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
E SI VS L AC LGS G IH +N + +LI+MY+K G + +
Sbjct: 228 HRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSLIDMYVKSGSLEKGL 287
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+F M +++ S++ +I GLA HG+ +A+ +F +M + P+D+ ++G+LSAC+H G
Sbjct: 288 CVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVLSACSHAG 347
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
NEGL F+ ++ +H I+ I+HYGC+VDL+GRAG L A ++I+ MP+KP+ +W SL
Sbjct: 348 LVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSL 407
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LS+C+ + NLEI IA E++ L + G+Y++L+N+YA+ +W DV+R+R + K +
Sbjct: 408 LSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWADVARIRTEMAEKHLV 467
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF-------WLLELLALHQDRAKDVIDI 534
+TPG SL+E N V +FVS D ++P + I+ W L+ D ++ ++D+
Sbjct: 468 QTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDV 524
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 282/505 (55%), Gaps = 40/505 (7%)
Query: 18 VPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V ++ C N L+ + +H +K + L ++D+ + G+L A +F+ + E
Sbjct: 255 VSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGE 314
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+V + +MI Y L +++ L+ +M ++ I PD FT+ ++ +CA
Sbjct: 315 RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEG-----ISPDIFTITTILHACACTGLLE 369
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK +H ++ + ++S NAL+D+Y A
Sbjct: 370 NGKDVHNYIKENKMQSDLFVSNALMDMY-------------------------------A 398
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+ G M A +F +M IVSW MI GY+ EAL++F +MQ +P+ I++
Sbjct: 399 KCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ-YNSKPNSITMAC 457
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
+LPACA L +LE G+ IH + +N + NAL++MY+KCG + A LFD + E+D
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 517
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+VSW+ +I G HG +AI F+EM+ + P++++FI +L AC+H+G +EG +F+
Sbjct: 518 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFN 577
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
M+ + IE K EHY C+VDLL RAG L +A I+ MP++PDA IWG+LL CR Y ++
Sbjct: 578 MMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDV 637
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
++A EH+ LEPE+TG YVLL+NIYA+ +WE+V ++R+ I + ++K PGCS IE+
Sbjct: 638 KLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEI 697
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLE 519
+V FV+GD + P I LL+
Sbjct: 698 KGKVHIFVTGDSSHPLANKIELLLK 722
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 172/321 (53%), Gaps = 20/321 (6%)
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
V++ CA L G++IH+ + ++ + + L+ +Y C +L E ++F+++ +
Sbjct: 107 VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEK 166
Query: 183 IVAWNNLISGYARLGQMKK------------------ARMLFDKMPYTTIVSWTAMISGY 224
+ WN L++GYA++G ++ AR LFD++ ++SW +MISGY
Sbjct: 167 VFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGY 226
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT 284
G + LD+F QM ++GI D ++VSV+ C+ G L LG +H Y K +
Sbjct: 227 VSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKEL 286
Query: 285 VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
+ N L++MY K G +N A Q+F+ M ER VVSW+++I G A G + ++ LFHEM++
Sbjct: 287 TLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE 346
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQ 404
+ P+ T +L ACA TG G + +K ++ ++ + L+D+ + G +
Sbjct: 347 GISPDIFTITTILHACACTGLLENGKDVHNYIK-ENKMQSDLFVSNALMDMYAKCGSMGD 405
Query: 405 ALNIIEEMPMKPDAKIWGSLL 425
A ++ EM +K D W +++
Sbjct: 406 AHSVFSEMQVK-DIVSWNTMI 425
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 113/263 (42%), Gaps = 55/263 (20%)
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
I + I + +G+ A+++ Q +E + SVL CA L S++ G IH
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHS 125
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQ------------------------------- 302
N + V+ + L+ MY+ CG + +
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185
Query: 303 ------------------ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
A +LFD++ +RDV+SW+++I G ++G + K + LF +M L
Sbjct: 186 SLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL 245
Query: 345 KVPPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+ + T + +++ C++TG G ++ ++K E + + CL+D+ ++G L+
Sbjct: 246 GINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNN--CLLDMYSKSGNLN 303
Query: 404 QALNIIEEMPMKPDAKIWGSLLS 426
A+ + E M + W S+++
Sbjct: 304 SAIQVFETMGERSVVS-WTSMIA 325
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/510 (35%), Positives = 282/510 (55%), Gaps = 43/510 (8%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C + E +++H +K ++ ++ + G A +F ++
Sbjct: 108 FPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEML 167
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V + +I Y L+ AINL+ +M ++P+ T V+ +C +
Sbjct: 168 VRDVVSWTGLISGYVRTGLFDEAINLFLKMD--------VVPNVATFVSVLVACGRMGYL 219
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S+GK +H V K + NAL+D+Y KC+ L EA K
Sbjct: 220 SMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARK-------------------- 259
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
LFD++P IVSWT++ISG ++L++F MQ+ G+EPD I +
Sbjct: 260 -----------LFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILT 308
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL ACA LG+L+ G W+ Y ++ + I AL++MY KCGCI A +F+ + R
Sbjct: 309 SVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNR 368
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
++ +W+ ++GGLA HG H+A+ F M + PN++TF+ +L+AC H+G EG YF
Sbjct: 369 NIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYF 428
Query: 374 DSM-KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
M + + ++EHYGC++DLL RAG LD+A I MP+ PD IWG+LLS+C+
Sbjct: 429 YQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANG 488
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N+E++ + HLL L+ +D+G YVLLSNIYA + RW+DV+R+R+L++ K ++K PG S+I
Sbjct: 489 NVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVI 548
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
EV+ E EF+ GD +DI LL +LA
Sbjct: 549 EVDGEAHEFLVGDTNHSRNEDIHILLNILA 578
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 211/419 (50%), Gaps = 47/419 (11%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
L+ R + + C+ + LK+IH ++ L F+++K+ + G + + F +
Sbjct: 4 LKLRLLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEF--FGKHIGFVDYAFDFL 61
Query: 73 KEPNVFL----YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
+ ++ + YN +I AY ++ A +Y +++ G+ +PD +T P V+K+C
Sbjct: 62 NQTDLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIV-----GNGFVPDMYTFPVVLKACT 116
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
L G+Q+H K G +N+LL Y C + A +VF+EM RD+V+W
Sbjct: 117 KFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTG 176
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
LISGY R G LFD EA+++F +M +V P+
Sbjct: 177 LISGYVRTG-------LFD------------------------EAINLFLKMDVV---PN 202
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+ VSVL AC ++G L +G+ +H K V+ NAL++MY+KC C+ +A +LFD
Sbjct: 203 VATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFD 262
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
++ +RD+VSW+++I GL + ++ LF++MQ V P+ I +LSACA G +
Sbjct: 263 ELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDY 322
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
G + ++R IE I LVD+ + G ++ AL+I +P + + W +LL
Sbjct: 323 GRWVQEYIER-QGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNR-NIFTWNALLGG 379
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 198/580 (34%), Positives = 306/580 (52%), Gaps = 76/580 (13%)
Query: 6 GALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTK-------------- 51
GAL +K V +C +L E +++ + K + NF+V++
Sbjct: 134 GALGLK-----LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF 188
Query: 52 --MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
M++ G A LF ++ + +V +N+MI Y +N L + +YKQM+
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-- 246
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I D T+ V+ CA SLGK +H+ K + N LLD+Y KC +L
Sbjct: 247 ---IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLD 303
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLG----------QMKKARMLFDKMPYTTIVS--- 216
A +VFE+M +R++V+W ++I+GY R G QM+K + D + T+I+
Sbjct: 304 GALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACA 363
Query: 217 --------------------------WTAMISGYTHIGSYAEALDVFRQM---------Q 241
A++ Y GS A VF M
Sbjct: 364 RSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNT 423
Query: 242 MVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
M+G ++PD ++ VLPACA L +LE G+ IH Y +N + NAL+++Y+KCG +
Sbjct: 424 MIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVL 483
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A LFD + +D+VSW+ +I G HG ++AI F+EM+ + P++++FI +L AC
Sbjct: 484 GLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYAC 543
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
+H+G +G +F MK D +IE K+EHY C+VDLL R G L +A +E +P+ PDA I
Sbjct: 544 SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATI 603
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
WG+LL CR Y ++E+A E + LEPE+TG YVLL+NIYA+ +WE+V R+R+ I
Sbjct: 604 WGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGK 663
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTK-PFLKDIFWLLE 519
+ ++K PGCS IE+ +V FVSG+++ P K+I LL+
Sbjct: 664 QGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLK 703
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 183/355 (51%), Gaps = 44/355 (12%)
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL-----YGKCDELIEAHK 173
T V++ CAGL + GK++H+ + KS+S+ + L L Y C +L E +
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSII-----KSNSVGVDGALGLKLVSFYATCGDLKEGRR 155
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKK--------------------ARMLFDKMPYTT 213
VF+ M +++ WN ++S YA++G K+ A LFDK+
Sbjct: 156 VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRD 215
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
++SW +MISGY G L +++QM +GI+ D +I+SVL CA G+L LG+ +H
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
K+ RR N L++MY KCG ++ A ++F++M ER+VVSW+++I G G++
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
AI L +M++ V + + +L ACA +G + G D +K + ++E + L+
Sbjct: 336 AIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALM 394
Query: 394 DLLGRAGRLDQALNIIEEM-------------PMKPDAKIWGSLLSSCRTYSNLE 435
D+ + G ++ A ++ M +KPD++ +L +C + S LE
Sbjct: 395 DMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALE 449
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 282/502 (56%), Gaps = 41/502 (8%)
Query: 17 FVPILQSCENLIELKK---IHTQIL-KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
+ +L+ C L ++++ +H ++ + L L ++++ G L A +F ++
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
++ + A+I ++ N+ A+ L+ QMLR G P+ FTL ++K+
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR---LG--FQPNHFTLSSLLKASGSEHG 204
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
G Q+HA K+G +S +AL+D+Y +C
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARC--------------------------- 237
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
G M A++ FD MP + VSW A+ISG+ G AL + +MQ +P +
Sbjct: 238 ----GHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTY 293
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
SVL ACA +G+LE G+W+H + K+ L I N L++MY K G I+ A ++FD++V+
Sbjct: 294 SSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVK 353
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
DVVSW+T++ G A HG + + F +M R+ + PN+I+F+ +L+AC+H+G +EGL Y
Sbjct: 354 PDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYY 413
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F+ MK+ + +E + HY VDLLGR G LD+A I EMP++P A +WG+LL +CR +
Sbjct: 414 FELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHK 472
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N+E+ V A E L+P D+G +LLSNIYA GRW DV+++RK+++ +KK P CS +
Sbjct: 473 NMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWV 532
Query: 493 EVNNEVQEFVSGDDTKPFLKDI 514
E+ N V FV+ D+T P +K+I
Sbjct: 533 EIENAVHLFVANDETHPRIKEI 554
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 156/324 (48%), Gaps = 43/324 (13%)
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH-VCKFGLKSHSITENALLDLYGKCDEL 168
GSL+ PD ++K C L G+ +HAH V L +H + +N ++++Y KC L
Sbjct: 81 GSLV-PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCL 139
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
+A ++F+EM +D+V W LI+G++ Q + R
Sbjct: 140 DDARRMFDEMPTKDMVTWTALIAGFS---QNNRPR------------------------- 171
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
+AL +F QM +G +P+ ++ S+L A L+ G +H +C K + +
Sbjct: 172 ---DALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGS 228
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY +CG ++ A FD M + VSW+ +I G A G+ A+HL +MQR P
Sbjct: 229 ALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQP 288
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG----CLVDLLGRAGRLDQ 404
T+ +LSACA G +G H I+ ++ L+D+ +AG +D
Sbjct: 289 THFTYSSVLSACASIGALEQG-----KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDD 343
Query: 405 ALNIIEEMPMKPDAKIWGSLLSSC 428
A + + + +KPD W ++L+ C
Sbjct: 344 AKRVFDRL-VKPDVVSWNTMLTGC 366
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL-RRTVI 286
G+ ALD+ ++ +V PD +L C +LG +E G +H + +H L V+
Sbjct: 69 GTGLYALDLIQRGSLV---PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVL 125
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
N ++ MY KCGC++ A ++FD+M +D+V+W+ +I G + + + A+ LF +M RL
Sbjct: 126 QNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGF 185
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
PN T LL A + G + + + + LVD+ R G +D A
Sbjct: 186 QPNHFTLSSLLKASGSEHGLDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQ 244
Query: 407 NIIEEMPMKPDAKIWGSLLS 426
+ MP K + W +L+S
Sbjct: 245 LAFDGMPTKSEVS-WNALIS 263
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 283/502 (56%), Gaps = 40/502 (7%)
Query: 10 IKELEDRFVPILQSCE---NLIELKKIHTQILKYLLSQSNFLVTK-MIDVCNSGGDLAYA 65
+K E + +L CE ++LK+IH L++ QS+ LV + G L YA
Sbjct: 396 VKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYA 455
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F ++ V +NA+I + N A++LY M GS + PD FT+ ++
Sbjct: 456 EGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLM-----RGSGLEPDLFTIASLLS 510
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA L S GK+IH + + G + +L+ LY +C +++ A F+ M ++++V
Sbjct: 511 ACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVC 570
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
WN +I+G+++ ++ P+ +ALD+F QM I
Sbjct: 571 WNTMINGFSQ-----------NEFPF--------------------DALDMFHQMLSSKI 599
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
PDEISI+ L AC+Q+ +L LG+ +H + K+HL + + +LI+MY KCGC+ Q+
Sbjct: 600 WPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQN 659
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+FD++ + V+W+ +I G HG KAI LF MQ P+ +TFI LL+AC H G
Sbjct: 660 IFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGL 719
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
EGL Y M+ I+ K+EHY C+VD+LGRAGRL++AL ++ E+P KPD++IW SLL
Sbjct: 720 VAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLL 779
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
SSCR Y +L+I LL L P+ NYVL+SN YA+ G+W++V +MR+ ++ ++K
Sbjct: 780 SSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQK 839
Query: 486 TPGCSLIEVNNEVQEFVSGDDT 507
GCS IE+ +V F+ GD++
Sbjct: 840 DAGCSWIEIGGKVSRFLVGDES 861
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 178/351 (50%), Gaps = 49/351 (13%)
Query: 20 ILQSC---ENLIELKKIHTQILKYLLSQSNF-LVTKMI---DVCNSGGDLAYASLLFKQV 72
+LQ C +N+ +KIH I Q++ L+T+++ +C+S D + L+F
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYD---SCLVFNAS 155
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ N+FL+NA++ Y N L+ A+ ++ +M+ + + +PD FTLP VIK+C G+
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMI----SLTEFVPDNFTLPCVIKACVGVYD 211
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
LG+ +H F LK+ ++ D+ N LI+
Sbjct: 212 VRLGEAVHG----FALKTKVLS---------------------------DVFVGNALIAM 240
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM--VGIEPDEI 250
Y + G ++ A +FDKMP +VSW +++ G + E+ +F+ + G+ PD
Sbjct: 241 YGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVA 300
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++V+V+P CA+ G + LG H K L + ++L++MY KCG + +A LFD
Sbjct: 301 TMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN 360
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ-RLKVPPNDITFIGLLSAC 360
E++V+SW+++IGG + A L +MQ KV N++T + +L C
Sbjct: 361 -EKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 4/227 (1%)
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM- 240
D+V L++ Y+ + ++F+ + W A++SGY + +A+ VF +M
Sbjct: 128 DVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMI 187
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ PD ++ V+ AC + + LGE +H + K +L + NALI MY K G +
Sbjct: 188 SLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFV 247
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK--VPPNDITFIGLLS 358
A ++FD+M +R++VSW++V+ +G ++ LF + + P+ T + ++
Sbjct: 248 ESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIP 307
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
CA G G M F + + +++ L+D+ + G L +A
Sbjct: 308 LCARQGEVRLG-MVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEA 353
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 291/481 (60%), Gaps = 8/481 (1%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+ + +SC + ++++ + +K F+ +I + G+LA A +F +
Sbjct: 116 FIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGML 175
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V +N++I Y + + ++L+++M + D T+ I + L
Sbjct: 176 ERDVVSWNSIICGYYQFNRFKKVLDLFREM-----QAINVRADSVTMMKAISATCFLSEW 230
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+G + ++ + G+ N L+D+YG+ + A +VF +M +++IV+WN +I GY
Sbjct: 231 EMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGY 290
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A++G + A+ LF++MP ++SWT+MI GY+ +AEA+ +F++M + ++PDEI++
Sbjct: 291 AKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVA 350
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+ L ACA LGSL+ GE +H Y K+ + + N+LI+MY KCG + +A Q+F+ M R
Sbjct: 351 TALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTR 410
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D VSW+++I GLA +G A A+++F +M + + P TF+G+L ACAH G ++G+ +F
Sbjct: 411 DSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHF 470
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM+ + + +++HYGC+VDLL R+G LD A N I++MP+ PD IW LLS+C+ + N
Sbjct: 471 KSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGN 530
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L +A I + LLVL+P + GNYVL S+ YA RW+DV ++RKL+ +++K S IE
Sbjct: 531 LVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIE 590
Query: 494 V 494
V
Sbjct: 591 V 591
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 210/457 (45%), Gaps = 70/457 (15%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMID-VCNSGGDLAYASLLFKQVKEPNVFL 79
+ + +L +K++H Q+++ + ++++I S L A +F Q++ P + +
Sbjct: 21 ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLV 80
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N MI + + AI+ Y M GS T F+ KSCA + G+ +
Sbjct: 81 WNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGS-----HLTFIFLFKSCARVSDVRQGQMV 135
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H K G +S+ NAL+ +Y EL A KVF+ M +RD+V+WN++I GY + +
Sbjct: 136 RVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRF 195
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
KK LD+FR+MQ + + D ++++ + A
Sbjct: 196 KK-------------------------------VLDLFREMQAINVRADSVTMMKAISAT 224
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
L E+G+++ Y D++ ++ + N LI+MY + G I+ A ++F QM E+++VSW+
Sbjct: 225 CFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWN 284
Query: 320 TVIGGLANHG------------------------------KAH-KAIHLFHEMQRLKVPP 348
+I G A G K H +A+ LF EM V P
Sbjct: 285 AMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKP 344
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
++IT LSACAH G + G D + R H I+ + L+D+ + G +++AL +
Sbjct: 345 DEITVATALSACAHLGSLDAGEAVHDYI-RKHDIKSDVFVGNSLIDMYCKCGVVEKALQV 403
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+M + D+ W S++S E A+ + +L
Sbjct: 404 FNDMKTR-DSVSWTSIISGLAVNGFAESALNVFDQML 439
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/513 (35%), Positives = 289/513 (56%), Gaps = 49/513 (9%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMI---DVCNSGGDLAYASLLFK 70
F +L+SC + E +++H I+K + ++ ++ VC GD AS +F
Sbjct: 37 FPAVLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGD---ASRVFD 93
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ +V + +I Y L+ A+ L+ +M +P + + V+ +C
Sbjct: 94 EMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMDVEPNAATFV--------SVLVACGRK 145
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
S+GK IH K NAL+D+Y KC
Sbjct: 146 GYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKC------------------------- 180
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
G + A+ +FD++ IVSWT++ISG EAL++F+ MQ GIEPD I
Sbjct: 181 ------GCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGI 234
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ SVL ACA+LG+L+ G W+H + D+ + I A+++MY KCGCI + Q+F+ M
Sbjct: 235 ILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGM 294
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
++V++W+ ++ GLA HG A+K + LF EM R+ + PN++TF+ +L+AC H G NEG
Sbjct: 295 PHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGR 354
Query: 371 MYFDSMK-RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF+ MK + +++ ++EHYGC+VDLL RA LD+AL + + MPM PD +I G+LLS+C+
Sbjct: 355 QYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACK 414
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
N E+ ++ + L+ D+G YVLLSNI+A + RW+DV+R+R+L++ K +KK PG
Sbjct: 415 ENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGS 474
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
++IE++ + EF+ GD P K I LL++L+
Sbjct: 475 TVIELDGKAHEFIVGDTRHPQDKRIRLLLKILS 507
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 178/348 (51%), Gaps = 41/348 (11%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+NA++ Y A +Y+++++D LPD FT P V+KSCA + G+Q+
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDG-----FLPDMFTFPAVLKSCAKFVGIGEGRQV 56
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H + K G + EN+L+ Y C +A +VF+EM RD+V+W +ISGY R G
Sbjct: 57 HGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAG-- 114
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
LFD EA+ +F +M +EP+ + VSVL AC
Sbjct: 115 -----LFD------------------------EAVGLFLRMD---VEPNAATFVSVLVAC 142
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
+ G L +G+ IH K+ + NAL++MY+KCGC+ A Q+FD++ E+D+VSW+
Sbjct: 143 GRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWT 202
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++I GL +A+ LF +MQ + P+ I +LSACA G + G + + R
Sbjct: 203 SIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDR- 261
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
I+ I+ +VD+ + G ++ ++ I MP K + W +LL+
Sbjct: 262 KAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK-NVLTWNALLNG 308
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 293/510 (57%), Gaps = 14/510 (2%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C L +K +IH + + + FL ++ + G L A LF ++
Sbjct: 125 FSLVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMM 184
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ + +N+MI Y + + A L+ M P ++ + +S GL
Sbjct: 185 KRDSVSFNSMIDGYVKHGMVKSARELFDVM---PMEQKNLISWNSMISGYARSEEGL--- 238
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ ++ + K L I+ N+++D KC ++ AH +F +M RD+V+W N++ GY
Sbjct: 239 RVAWELFEEMPKRDL----ISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGY 294
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISI 252
A+LG++ AR LFD+MP ++S AM++GY G EAL+ F M + PD ++
Sbjct: 295 AKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATL 354
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+ L A AQLG + G +H Y + N + ALI+MY KCG I+ A +F+ + +
Sbjct: 355 LITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDD 414
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+ + W+ +IGGLA HG A LF EM++L V P+DITFIG+L+AC H G EGLM
Sbjct: 415 KSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMC 474
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F+ M+R H +E K++HYGC+VD+LGRAG +++A +E+MP++P+ +W +LLS+CR +
Sbjct: 475 FELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHE 534
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N I +HL+ ++ + +YVLLSNIYA G W DV R+R +++ + +KK PGCS I
Sbjct: 535 NFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQI 594
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
E+ V EF D + P +++I+ +L+ L+
Sbjct: 595 ELEGNVHEFFVRDKSHPQVREIYSMLDSLS 624
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 231/450 (51%), Gaps = 35/450 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---LAYASLLF------- 69
+L + L ++ +IH++++ + L T++I +S + +A LF
Sbjct: 20 LLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGR 79
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
K K+ N FL+NA+I+++++ A ++ ML + + DKF+ V+K+C+
Sbjct: 80 KHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENG-----VCVDKFSFSLVLKACSR 134
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L G QIH + + + S +N L+ LY +C L A ++F+ M RD V++N++
Sbjct: 135 LGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSM 194
Query: 190 ISGYARLGQMKKARMLFDKMPY--TTIVSWTAMISGYTHIGSYAE-ALDVFRQMQMVGIE 246
I GY + G +K AR LFD MP ++SW +MISGY A ++F +M +
Sbjct: 195 IDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMP----K 250
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA-LIEMYIKCGCINQASQ 305
D IS S++ C + G +E H++ N + +R V+ A +++ Y K G I+ A
Sbjct: 251 RDLISWNSMIDGCVKCGKMENAH--HLF---NQMPKRDVVSWANMVDGYAKLGEIDIARG 305
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTG 364
LFD+M ERDV+S + ++ G +G +A++ FH+M R ++ P++ T + LSA A G
Sbjct: 306 LFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLG 365
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
++EG+ D+ + L+D+ + G +D AL++ E++ K W ++
Sbjct: 366 HFDEGVA-LHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDK-SIDHWNAI 423
Query: 425 LSSCRTYSNLEIA---VIAMEHLLVLEPED 451
+ + E+A + ME L V +P+D
Sbjct: 424 IGGLAIHGLGEVAFELFMEMEKLFV-KPDD 452
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 289/520 (55%), Gaps = 46/520 (8%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
E K+ H +ILK L +F + ++ C + G + YA +F+Q+ EP F +N M+R
Sbjct: 3 EFKQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRG 62
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
+ + A+ YK+M + PD FT P ++K+CA L G Q+HAH+ K
Sbjct: 63 HVKDMNTEEALITYKEMAERG-----VKPDNFTYPTLLKACARLPAVEEGMQVHAHILKL 117
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
GL++ D+ N+LIS Y + G++ +F
Sbjct: 118 GLEN-------------------------------DVFVQNSLISMYGKCGEIGVCCAVF 146
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI-VSVLPACAQLGSL 265
++M ++ SW+A+I+ + +G +++ L + M G E SI VSVL AC LG+L
Sbjct: 147 EQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGAL 206
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+LG +H + +N ++ +LIEMY+KCG + + LF +M +++ +S+S +I GL
Sbjct: 207 DLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGL 266
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A HG + + +F EM + P+DI ++G+L+AC+H G EGL F+ MK +H IE
Sbjct: 267 AMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPT 326
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
I+HYGC+VDL+GRAG++D+AL +I+ MPM+P+ +W SLLS+ + ++NL+ IA + L
Sbjct: 327 IQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLF 386
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
L+ + +YV+LSN+YA+ RWEDV+R R + SK + + PG SL+EV ++ FVS D
Sbjct: 387 KLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQD 446
Query: 506 DTKPFLKDIF-------WLLELLALHQDRAKDVIDIMYED 538
P + ++ W L+ D + + D+ E+
Sbjct: 447 AGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDVDEEE 486
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 288/514 (56%), Gaps = 14/514 (2%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQI-LKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
L + + + C I+ K+ Q+ L+ L S +N M+ G L A ++F
Sbjct: 84 LSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNN-----MVSGYVKSGMLVRARVVFDS 138
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ E +V +N M+ Y + A+ YK+ R S I ++F+ ++ +C
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR-----SGIKFNEFSFAGLLTACVKSR 193
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
L +Q H V G S+ + +++D Y KC ++ A + F+EMT +DI W LIS
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GYA+LG M+ A LF +MP VSWTA+I+GY GS ALD+FR+M +G++P++ +
Sbjct: 254 GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
S L A A + SL G+ IH Y + ++ ++ ++LI+MY K G + + ++F
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 312 ER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
++ D V W+T+I LA HG HKA+ + +M + +V PN T + +L+AC+H+G EGL
Sbjct: 374 DKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL 433
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+F+SM H I EHY CL+DLLGRAG + + IEEMP +PD IW ++L CR
Sbjct: 434 RWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRI 493
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ N E+ A + L+ L+PE + Y+LLS+IYA HG+WE V ++R +++ + + K S
Sbjct: 494 HGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVS 553
Query: 491 LIEVNNEVQEFVSGDDTKPFLK--DIFWLLELLA 522
IE+ +V+ F D + + +I+++L LA
Sbjct: 554 WIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLA 587
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 38/345 (11%)
Query: 120 LPF-----VIKSCAGLLCPSLGKQIHAHVCKFGLKS-HSITENALLDLYGKCDELIEAHK 173
LPF +++ C GK IH H+ G K +++ N L+ +Y KC + I+A K
Sbjct: 44 LPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACK 103
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
VF++M R++ +WNN++SGY + G + +AR++FD MP +VSW M+ GY G+ EA
Sbjct: 104 VFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
L +++ + GI+ +E S +L AC + L+L H L V+ ++I+
Sbjct: 164 LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 294 YIKCGCINQASQLFDQMVERDV-------------------------------VSWSTVI 322
Y KCG + A + FD+M +D+ VSW+ +I
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALI 283
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
G G ++A+ LF +M L V P TF L A A G M R +
Sbjct: 284 AGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVR 343
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+ I L+D+ ++G L+ + + K D W +++S+
Sbjct: 344 PNAIV-ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISA 387
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 54/300 (18%)
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
+ +S + ++A+ + GI + S+L C SL+ G+WIH +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 279 HLLR-RTVICNALIEMYIKCGCINQASQLFDQ---------------------------- 309
R T++ N LI MY+KCG A ++FDQ
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 310 ---MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
M ERDVVSW+T++ G A G H+A+ + E +R + N+ +F GLL+AC +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 367 NEGLMYFDSMKRDHHIEHKIEHY------GC-LVDLLGRAGRLDQALNIIEEMPMKPDAK 419
+ R H + + + C ++D + G+++ A +EM +K D
Sbjct: 196 Q--------LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DIH 246
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IW +L+S ++E A E L PE N V + + A + R +R L R
Sbjct: 247 IWTTLISGYAKLGDME----AAEKLFCEMPEK--NPVSWTALIAGYVRQGSGNRALDLFR 300
>gi|255540655|ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550507|gb|EEF51994.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 441
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 259/415 (62%), Gaps = 6/415 (1%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+ + ++ N L+ A+ L+ M +T + D + P V+KSC+ +LCP LG +
Sbjct: 30 FTKQLTSHVNRGLHHDALTLFYHM----QTSLALSLDPYVFPLVLKSCSAVLCPQLGTSV 85
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
HAH+ K G S+ +AL+D+YGKC + A K+F+E+ R++V WN +IS Y ++
Sbjct: 86 HAHIVKMGFLSNPFVASALVDMYGKCACIFSARKLFDEIPQRNVVVWNAMISLYTHSNRV 145
Query: 200 KKARMLFDKMPYTTIVS-WTAMISGYTHIGSYA-EALDVFRQMQMVGIEPDEISIVSVLP 257
+ A +FD M VS + A+I G + + + +A+ + +M+ +G++P+ I+++++LP
Sbjct: 146 RDALDMFDAMEIEPNVSTFNALIYGLSGVKDGSIKAIAFYWKMRQLGLKPNLITLLALLP 205
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
AC + +L L IH Y +N + R + + L++ Y +CGC+ AS +F M ERDVV+
Sbjct: 206 ACVGIAALNLIREIHGYSIRNDIDRHPQLGSGLLDAYGRCGCLINASNVFCGMKERDVVA 265
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
WS++I A HG+A A+ +F +M+ KV P+DITF+ +L AC+H G +E L YF M+
Sbjct: 266 WSSLISAYALHGEAKNALEIFRQMELAKVQPDDITFLAVLKACSHAGLADEALDYFTKMQ 325
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ ++ +HY CLVD+L RAGRL +A +I+EMP+K AK WG+LL +CRTY +E+A
Sbjct: 326 EGYRLQAVSDHYSCLVDVLSRAGRLYEAYKVIQEMPVKVTAKAWGALLGACRTYGEIELA 385
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
I L +EP++ NYVLL+ IYA GR+++ R+R+ ++ + +K +PG S +
Sbjct: 386 EIVGRALFEIEPDNPANYVLLARIYASVGRYDEAQRIRREMKERGVKVSPGSSWV 440
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 178/396 (44%), Gaps = 69/396 (17%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L+SC ++ + +H I+K + F+ + ++D+ + A LF ++
Sbjct: 66 FPLVLKSCSAVLCPQLGTSVHAHIVKMGFLSNPFVASALVDMYGKCACIFSARKLFDEIP 125
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDP---------------RTGSL------ 112
+ NV ++NAMI YT+++ A++++ M +P + GS+
Sbjct: 126 QRNVVVWNAMISLYTHSNRVRDALDMFDAMEIEPNVSTFNALIYGLSGVKDGSIKAIAFY 185
Query: 113 -------ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
+ P+ TL ++ +C G+ +L ++IH + + + H + LLD YG+C
Sbjct: 186 WKMRQLGLKPNLITLLALLPACVGIAALNLIREIHGYSIRNDIDRHPQLGSGLLDAYGRC 245
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
LI A VF M +RD+VAW++LIS YA G+ K
Sbjct: 246 GCLINASNVFCGMKERDVVAWSSLISAYALHGEAKN------------------------ 281
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
AL++FRQM++ ++PD+I+ ++VL AC+ G + E + + R
Sbjct: 282 -------ALEIFRQMELAKVQPDDITFLAVLKACSHAGLAD--EALDYFTKMQEGYRLQA 332
Query: 286 ICN---ALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
+ + L+++ + G + +A ++ +M V+ +W ++G +G+ A + +
Sbjct: 333 VSDHYSCLVDVLSRAGRLYEAYKVIQEMPVKVTAKAWGALLGACRTYGEIELAEIVGRAL 392
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
++ P N ++ L A G ++E MK
Sbjct: 393 FEIE-PDNPANYVLLARIYASVGRYDEAQRIRREMK 427
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 261/469 (55%), Gaps = 44/469 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G++ A LF + +VF + AM+ Y N + A L+ +M P++
Sbjct: 259 GEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM-----------PER-- 305
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ ++ NA+L Y + + + A ++F+ M
Sbjct: 306 -------------------------------NEVSWNAMLAGYVQGERVEMAKELFDVMP 334
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
R++ WN +I+GYA+ G++ +A+ LFDKMP VSW AMI+GY+ G EAL +F
Sbjct: 335 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVL 394
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ G + S S L CA + +LELG+ +H K + NAL+ MY KCG
Sbjct: 395 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 454
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
I +A+ LF +M +D+VSW+T+I G + HG +A+ F M+R + P+D T + +LSA
Sbjct: 455 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSA 514
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+HTG ++G YF +M +D+ + +HY C+VDLLGRAG L++A N+++ MP +PDA
Sbjct: 515 CSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAA 574
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IWG+LL + R + N E+A A + + +EPE++G YVLLSN+YA GRW DV ++R +R
Sbjct: 575 IWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMR 634
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
K +KK PG S IE+ N+ F GD+ P +IF LE L L +A
Sbjct: 635 DKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKA 683
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 210/451 (46%), Gaps = 44/451 (9%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
++ K + S+ MI G+ A +LF ++ E ++ +N MI+ Y N G
Sbjct: 80 RVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGK 139
Query: 96 AINLYKQML-RDPRTGSLILP---------------DKFTLPFVIKSCAGLLCPSLGKQI 139
A L+++M RD + + IL D+ + A L ++
Sbjct: 140 ARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKL 199
Query: 140 HAHVCKFGLKSHS--ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
FG + + ++ N LL + K +++EA + F+ M RD+V+WN +I+GYA+ G
Sbjct: 200 EEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNG 259
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
++ +AR LFD+ P + +WTAM+SGY EA ++F +M E +E+S ++L
Sbjct: 260 EIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMP----ERNEVSWNAMLA 315
Query: 258 ACAQLGSLELGEWIH--MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
Q +E+ + + M C R N +I Y +CG I++A LFD+M +RD
Sbjct: 316 GYVQGERVEMAKELFDVMPC------RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 369
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSW+ +I G + G +++A+ LF M+R N +F LS CA G
Sbjct: 370 VSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 429
Query: 376 MKRDHHIEHKIEHYGCLVD-----LLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+ + + GC V + + G +++A ++ +EM K D W ++++
Sbjct: 430 LVKGGY------ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSR 482
Query: 431 YSNLEIAVIAMEHLLV--LEPEDTGNYVLLS 459
+ E A+ E + L+P+D +LS
Sbjct: 483 HGFGEEALRFFESMKREGLKPDDATMVAVLS 513
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 151/349 (43%), Gaps = 67/349 (19%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
N + Y + EA +VF+ M V++N +ISGY R G+ + ARMLFD+MP +V
Sbjct: 63 NVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLV 122
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE------ 269
SW MI GY + +A ++F +M E D S ++L AQ G ++
Sbjct: 123 SWNVMIKGYVRNRNLGKARELFERMP----ERDVCSWNTILSGYAQNGCVDDARRVFDRM 178
Query: 270 -------W---IHMYCDKNHLLRRTVI-----------CNALIEMYIKCGCINQASQLFD 308
W + Y + L V+ N L+ ++K I +A Q FD
Sbjct: 179 PEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFD 238
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWN 367
M RDVVSW+T+I G A +G+ +A LF E P +D+ T+ ++S
Sbjct: 239 SMKVRDVVSWNTIITGYAQNGEIDEARQLFDE-----SPVHDVFTWTAMVSGYIQNRMVE 293
Query: 368 EGLMYFDSMKRDHHIE-----------HKIEHYGCLVDLL---------------GRAGR 401
E FD M + + ++E L D++ + G+
Sbjct: 294 EARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGK 353
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
+ +A N+ ++MP K D W ++++ YS + A+ +++E E
Sbjct: 354 ISEAKNLFDKMP-KRDPVSWAAMIAG---YSQSGHSYEALRLFVLMERE 398
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 22/249 (8%)
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D DI WN IS Y R G+ +A +F +MP + VS+ AMISGY G + A +F +
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDE 115
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALIEMYIKCG 298
M E D +S ++ + + LG+ ++ + R V N ++ Y + G
Sbjct: 116 MP----ERDLVSWNVMIKGYVR--NRNLGKARELF---ERMPERDVCSWNTILSGYAQNG 166
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
C++ A ++FD+M E++ VSW+ ++ + K +A LF + + +++ LL
Sbjct: 167 CVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWAL----VSWNCLLG 222
Query: 359 ACAHTGFWNEGLMYFDSMK-RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
E +FDSMK RD + + ++ + G +D+A + +E P+ D
Sbjct: 223 GFVKKKKIVEARQFFDSMKVRD------VVSWNTIITGYAQNGEIDEARQLFDESPVH-D 275
Query: 418 AKIWGSLLS 426
W +++S
Sbjct: 276 VFTWTAMVS 284
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L +C +++ L K++H +++K F+ ++ + G + A+ LFK++
Sbjct: 407 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 466
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
++ +N MI Y+ + A+ ++ M R+ + PD T+ V+ +C+
Sbjct: 467 GKDIVSWNTMIAGYSRHGFGEEALRFFESMKREG-----LKPDDATMVAVLSACSHTGLV 521
Query: 134 SLGKQ-IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
G+Q H +G++ +S ++DL G+ L EAH + + M + D W L+
Sbjct: 522 DKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLG 581
Query: 192 GYARLGQMKKARMLFDKM 209
G + A DK+
Sbjct: 582 ASRVHGNTELAETAADKI 599
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/463 (35%), Positives = 283/463 (61%), Gaps = 8/463 (1%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C E +++H ++K F+ +I + + G LA A +F ++
Sbjct: 943 FPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEML 1002
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +N++I Y+ ++ + L+K M + + DK T+ VI +C L
Sbjct: 1003 VKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEE-----VQADKVTMVKVISACTHLGDW 1057
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S+ + ++ ++ N L+D Y + +L A KVF +M D++ V N +I+ Y
Sbjct: 1058 SMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAY 1117
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G + A+ +FD++P ++SW++MI Y+ ++++L++FRQMQ ++PD + I
Sbjct: 1118 AKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIA 1177
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL ACA LG+L+LG+WIH Y +N++ T++ N+LI+M+ KCGC+ +A Q+F M E+
Sbjct: 1178 SVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEK 1237
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +SW+++I GLAN+G +A+ +FH M PN++TF+G+L ACA+ EGL +F
Sbjct: 1238 DTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHF 1297
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ MK H++E +++HYGC+VD+L RAG+L++A++ I EMP+ PD +W LL +CRT+ N
Sbjct: 1298 ERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGACRTHGN 1357
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
+ +A +A + L L+P ++ + +LLSNIYA RW D +R+
Sbjct: 1358 VAVAEMATKKLSELDPGNSADSMLLSNIYASADRWSDAMNVRR 1400
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 265/419 (63%), Gaps = 11/419 (2%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F Q P + A ++AY++ A++L+K + + D F FV+K+C
Sbjct: 440 VFDQSPAP----WRAFLKAYSHGPFPLEALHLFKHARQH------LADDTFVFTFVLKAC 489
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
AGL G Q+HA V + G + H+ AL+++Y L+EA KVF+EM +++V+WN
Sbjct: 490 AGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWN 549
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+I+G+A G+++ AR+LFD+MP +VSWT +I GYT YAEAL + R M GI P
Sbjct: 550 VMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISP 609
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
EI++++V+PA + LG + +GE ++ YC+K ++ + N+LI++Y K G + + ++F
Sbjct: 610 SEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVF 669
Query: 308 DQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
D+M++ R++VSW+++I G A HG + +A+ LF EM+R + PN ITF+ +++AC+H G
Sbjct: 670 DEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLV 729
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+GL +F SM +++I+ +I+H+GC++D+LGRAGRL +A IIE +PM+ + +W LL
Sbjct: 730 EQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLG 789
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
C Y + + A++ + LE E G++ +LSN+ + GR+ D + RKL+ + + K
Sbjct: 790 CCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVK 848
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 216/422 (51%), Gaps = 21/422 (4%)
Query: 11 KELEDRFVPILQSCENLIE-LKKIHTQILKYLLSQSNFLVTKMIDVCN-SGGDLAYASLL 68
K L+ R + LQ E ++E +KK+H ++ L + ++K+I + DL A +
Sbjct: 839 KLLDQRKIVKLQ--EAVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKV 896
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
FKQ++ P FL+N ++R + AI YK+ + PD T PFV+K+CA
Sbjct: 897 FKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKG-----MKPDNLTFPFVLKACA 951
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
P G+Q+H HV K G N+L+ LY C L A VF EM +D+V+WN+
Sbjct: 952 KTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNS 1011
Query: 189 LISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
LI GY++ ++K+ LF M + V+ +IS TH+G ++ A + R ++
Sbjct: 1012 LIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNH 1071
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWI-HMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
IE D +++ ++G L+ E + DKN TV NA+I Y K G + A
Sbjct: 1072 IEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKN-----TVTLNAMITAYAKGGNLVSA 1126
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
++FDQ+ +D++SWS++I + ++ LF +MQR KV P+ + +LSACAH
Sbjct: 1127 KKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHL 1186
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G + G D ++R+ +I+ L+D+ + G + +AL + +M K D W S
Sbjct: 1187 GALDLGKWIHDYVRRN-NIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEK-DTLSWNS 1244
Query: 424 LL 425
++
Sbjct: 1245 II 1246
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 165/352 (46%), Gaps = 53/352 (15%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
V ++ C L+E +K+ ++ + N ++T G++ YA LLF Q+ NV
Sbjct: 523 VYVMSRC--LVEARKVFDEMPVKNVVSWNVMITGFA----GWGEVEYARLLFDQMPCRNV 576
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+ +I YT LY A+ L + M+ I P + T+ VI + + L +G+
Sbjct: 577 VSWTGLIDGYTRACLYAEALTLLRHMM-----AGGISPSEITVLAVIPAISNLGGILMGE 631
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD-RDIVAWNNLISGYARL 196
++ + K G+ S + N+L+DLY K + + KVF+EM D R++V+W ++ISG+A
Sbjct: 632 MLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMH 691
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G EAL++F +M+ GI+P+ I+ +SV+
Sbjct: 692 GL-------------------------------SVEALELFAEMRRAGIKPNRITFLSVI 720
Query: 257 PACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERD 314
AC+ G +E G + + ++ +I+M + G + +A Q+ + + +E +
Sbjct: 721 NACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVN 780
Query: 315 VVSWSTVIGGLANHGK---AHKAIHLFHEMQR-----LKVPPNDITFIGLLS 358
V W ++G + +G+ +AI + +++R V N +T +G S
Sbjct: 781 VTVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFS 832
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 259/469 (55%), Gaps = 44/469 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G + A LF + +VF + AM+ Y N + A L+ +M P++
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM-----------PER-- 310
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ ++ NA+L Y + + + A ++F+ M
Sbjct: 311 -------------------------------NEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
R++ WN +I+GYA+ G++ +A+ LFDKMP VSW AMI+GY+ G EAL +F Q
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ G + S S L CA + +LELG+ +H K + NAL+ MY KCG
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
I +A+ LF +M +D+VSW+T+I G + HG A+ F M+R + P+D T + +LSA
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+HTG ++G YF +M +D+ + +HY C+VDLLGRAG L+ A N+++ MP +PDA
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IWG+LL + R + N E+A A + + +EPE++G YVLLSN+YA GRW DV ++R +R
Sbjct: 580 IWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMR 639
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
K +KK PG S IE+ N+ F GD+ P +IF LE L L +A
Sbjct: 640 DKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKA 688
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 208/457 (45%), Gaps = 56/457 (12%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
++ K + S+ MI G+ A LF ++ E ++ +N MI+ Y N G
Sbjct: 85 RVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGK 144
Query: 96 AINLYKQM--------------------LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
A L++ M + D R+ +P+K + S LL +
Sbjct: 145 ARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV-----SWNALLSAYV 199
Query: 136 GKQIHAHVCKFGLKSHS----ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
C KS ++ N LL + K +++EA + F+ M RD+V+WN +I+
Sbjct: 200 QNSKMEEACML-FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIIT 258
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GYA+ G++ +AR LFD+ P + +WTAM+SGY EA ++F +M E +E+S
Sbjct: 259 GYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVS 314
Query: 252 IVSVLPACAQLGSLELGEWIH--MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++L Q +E+ + + M C R N +I Y +CG I++A LFD+
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPC------RNVSTWNTMITGYAQCGKISEAKNLFDK 368
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M +RD VSW+ +I G + G + +A+ LF +M+R N +F LS CA G
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVD-----LLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+ + + GC V + + G +++A ++ +EM K D W ++
Sbjct: 429 KQLHGRLVKGGY------ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTM 481
Query: 425 LSSCRTYSNLEIAVIAMEHLLV--LEPEDTGNYVLLS 459
++ + E+A+ E + L+P+D +LS
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 144/342 (42%), Gaps = 70/342 (20%)
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
G+C+E A +VF+ M V++N +ISGY R G+ + AR LFD+MP +VSW MI
Sbjct: 78 GRCNE---ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIK 134
Query: 223 GYTHIGSYAEALDVFRQMQMVGI---------------------------EPDEISIVSV 255
GY + +A ++F M + E +++S ++
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L A Q +E E ++ + + V N L+ ++K I +A Q FD M RDV
Sbjct: 195 LSAYVQNSKME--EACMLFKSRENWA--LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV 250
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLMYFD 374
VSW+T+I G A GK +A LF E P D+ T+ ++S E FD
Sbjct: 251 VSWNTIITGYAQSGKIDEARQLFDE-----SPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 375 SMKRDHHIE--------------------------HKIEHYGCLVDLLGRAGRLDQALNI 408
M + + + + ++ + G++ +A N+
Sbjct: 306 KMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
++MP K D W ++++ YS + A+ + +E E
Sbjct: 366 FDKMP-KRDPVSWAAMIAG---YSQSGHSFEALRLFVQMERE 403
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D DI WN IS Y R G+ +A +F +MP + VS+ MISGY G + A +F +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC--NALIEMYIKC 297
M E D +S ++ + + LG+ ++ ++ +C N ++ Y +
Sbjct: 121 MP----ERDLVSWNVMIKGYVR--NRNLGKARELF----EIMPERDVCSWNTMLSGYAQN 170
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
GC++ A +FD+M E++ VSW+ ++ + K +A LF + + +++ LL
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLL 226
Query: 358 SACAHTGFWNEGLMYFDSMK-RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
E +FDSM RD + + ++ ++G++D+A + +E P++
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRD------VVSWNTIITGYAQSGKIDEARQLFDESPVQ- 279
Query: 417 DAKIWGSLLS 426
D W +++S
Sbjct: 280 DVFTWTAMVS 289
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L +C +++ L K++H +++K F+ ++ + G + A+ LFK++
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
++ +N MI Y+ + +A+ ++ M R+ + PD T+ V+ +C+
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG-----LKPDDATMVAVLSACSHTGLV 526
Query: 134 SLGKQ-IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
G+Q + +G+ +S ++DL G+ L +AH + + M + D W L+
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 192 GYARLGQMKKARMLFDKM 209
G + A DK+
Sbjct: 587 ASRVHGNTELAETAADKI 604
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 305/600 (50%), Gaps = 100/600 (16%)
Query: 17 FVPILQSCENLIELKKIHTQIL--KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK- 73
V + + C + L+++HTQ++ + + +N L++K I + N Y+SLLF +
Sbjct: 27 LVFLAKQCSSTKTLQQVHTQMVVNSSIHTPNNHLLSKAIHLKN----FPYSSLLFSHIAP 82
Query: 74 EPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
PN + +N MIRA T H Y LA++L+ +M+ T PD FT PF SCA L
Sbjct: 83 HPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLT-----PDNFTFPFFFLSCANLAS 137
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKC----------DELI------------- 169
S H+ + K L S T ++L+ Y +C DE+
Sbjct: 138 LSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAG 197
Query: 170 --------EAHKVFEEMTDRD-----------------------IVAW------------ 186
EA +VF EM RD + W
Sbjct: 198 YAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTL 257
Query: 187 -----NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+ LIS YA+ G+++ AR +FD M +++W A+ISGY G EA+ +F M+
Sbjct: 258 NSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMK 317
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
+ ++I++ +VL ACA +G+L+LG+ I Y + + ALI+MY K G ++
Sbjct: 318 EDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLD 377
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLLSA 359
A ++F M +++ SW+ +I LA HGKA +A+ LF M + PNDITF+GLLSA
Sbjct: 378 NAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSA 437
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C H G +EG FD M + KIEHY C+VDLL RAG L +A ++I +MP KPD
Sbjct: 438 CVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKV 497
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
G+LL +CR+ N++I M +L ++P ++GNY++ S IYA WED +RMR L+R
Sbjct: 498 TLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMR 557
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539
K + KTPGCS IEV N + EF +GD L L ++ID++YE++
Sbjct: 558 QKGITKTPGCSWIEVENHLHEFHAGDG--------------LCLDSIDLSNIIDLLYEEL 603
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 311/584 (53%), Gaps = 79/584 (13%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
C LK+ + ++ L+ F ++ ++ ++ DL Y LLF ++ P +FL+
Sbjct: 15 FHKCGTFDHLKQTTSILITSGLAHHTFFLSDILR--SATKDLGYTLLLFDRLATPYIFLW 72
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N +IR ++ + + + Y ++ ++PD+ T P ++K+ + L + Q +
Sbjct: 73 NTIIRGFSASSQPQMVLVAYSRLRNHG-----VIPDRHTFPLLLKAFSKLRNEN-PFQFY 126
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
AH+ KFGL + +N+L+ + C + + ++F E +D+V+W LI+G R G+
Sbjct: 127 AHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAV 186
Query: 201 KARMLFDKMPYT-------TIVS-----------W----------------------TAM 220
+A F +M + TIVS W +A+
Sbjct: 187 EALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSAL 246
Query: 221 ISGYTHIGSYAEALDVFRQM-----------------------------QMV--GIEPDE 249
+ Y+ G +A+ VF +M +M+ GIEP++
Sbjct: 247 VDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQ 306
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++ S L ACAQLGSL+ G W+H Y D++ L + + AL++MY KCGC+++A +F++
Sbjct: 307 STVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEK 366
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
+ +DV W+ +I GLA G A +++LF +M R +V PN +TF+G+LSACAH G +EG
Sbjct: 367 LPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEG 426
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
L F M D+ +E ++HYGC+VDLLGRAGRL++A+ IE MPM+P +WG+L S C
Sbjct: 427 LELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCM 486
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ E+ HL+ L+P +G Y+LL+N+Y++ +WE + +R+L++ K + K+PGC
Sbjct: 487 IHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGC 546
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
S IEVN + EF++ D + +++ +LE ++ A +D
Sbjct: 547 SWIEVNGVIHEFIAFDKSHTESINVYMMLESVSAQLKLATYALD 590
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/475 (36%), Positives = 280/475 (58%), Gaps = 7/475 (1%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
IH ++LK ++ +I++ S G L A +F ++ E ++ +N+++ Y
Sbjct: 99 IHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKR 158
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
+ + +++ M G D T+ V+ +C L + + ++ + ++
Sbjct: 159 FREVLGVFEAMRVAGVKG-----DAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDV 213
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
N L+D+YG+ + A VF++M R++V+WN +I GY + G + AR LFD M
Sbjct: 214 YLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQR 273
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
++SWT MI+ Y+ G + EAL +F++M ++PDEI++ SVL ACA GSL++GE H
Sbjct: 274 DVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAH 333
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
Y K + + NALI+MY KCG + +A ++F +M ++D VSW+++I GLA +G A
Sbjct: 334 DYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGFAD 393
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
A+ F M R V P+ F+G+L ACAH G ++GL YF+SM++ + ++ +++HYGC+
Sbjct: 394 SALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCV 453
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VDLL R+G L +A I+EMP+ PD IW LLS+ + + N+ +A IA + LL L+P ++
Sbjct: 454 VDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLELDPSNS 513
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
GNYVL SN YA RWED +MR+L+ +++K G S IE+ E+Q DD+
Sbjct: 514 GNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCIEM--ELQNGHRIDDS 566
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 193/390 (49%), Gaps = 69/390 (17%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
LF+Q+ P + +N MIR ++ + AI +Y M R +L + T F+ K+C
Sbjct: 33 LFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQG-----LLGNNLTYLFLFKAC 87
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
A + S G IHA V K G +SH NAL+++YG C L A KVF+EM +RD+V+WN
Sbjct: 88 ARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWN 147
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+L+ GY GQ K+ R E L VF M++ G++
Sbjct: 148 SLVCGY---GQCKRFR----------------------------EVLGVFEAMRVAGVKG 176
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHL--------------------------- 280
D +++V V+ AC LG + + + Y ++N++
Sbjct: 177 DAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVF 236
Query: 281 ----LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
R V NA+I Y K G + A +LFD M +RDV+SW+ +I + G+ +A+
Sbjct: 237 DQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALR 296
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
LF EM KV P++IT +LSACAHTG + G D +++ + ++ I L+D+
Sbjct: 297 LFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQK-YDVKADIYVGNALIDMY 355
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ G +++AL + +EM K D+ W S++S
Sbjct: 356 CKCGVVEKALEVFKEM-RKKDSVSWTSIIS 384
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 188 NLISGYA-RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
NLI YA + KA LF ++ T+ W MI G++ EA+ ++ M G+
Sbjct: 15 NLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLL 74
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
+ ++ + + ACA++ + G IH K + NALI MY CG + A ++
Sbjct: 75 GNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKV 134
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
FD+M ERD+VSW++++ G + + + +F M+ V + +T + ++ AC G W
Sbjct: 135 FDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEW 194
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
D ++ ++++E + L+D+ GR G + A + ++M + + W +++
Sbjct: 195 GVADAMVDYIE-ENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWR-NLVSWNAMIM 252
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
NL V A E + D ++ + Y++ G++ + R+ K + +K
Sbjct: 253 GYGKAGNL---VAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVK 307
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+ I N + + I +A LF Q+ + W+ +I G + + ++AI +++ M R
Sbjct: 11 STIYNLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYR 70
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+ N++T++ L ACA + G + + E + L+++ G G L
Sbjct: 71 QGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLK-LGFESHLYVSNALINMYGSCGHLG 129
Query: 404 QALNIIEEMPMKPDAKIWGSLL 425
A + +EMP + D W SL+
Sbjct: 130 LAQKVFDEMPER-DLVSWNSLV 150
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 277/504 (54%), Gaps = 38/504 (7%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQ 71
E + +LQ C +L L+KIH ++ L + K+++ C + G LAYA LLF Q
Sbjct: 4 EKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQ 63
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ P +N++IR + + AI Y QM+ D S +PD FT FV+K+C +
Sbjct: 64 MECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCD----SFSIPDTFTFSFVLKACERIK 119
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
K++H V + G D D++ NL+
Sbjct: 120 AERKCKEVHGSVIRCGY-------------------------------DADVIVCTNLVK 148
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
Y+ +G + AR +FDKMP +V+W AMIS ++ G + EAL + QM+ ++ D +
Sbjct: 149 CYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDIDGFT 208
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V ++ +CA LG+L +G +H + +N L + + NALI+MY KCG ++QA +FD+M
Sbjct: 209 LVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRMQ 268
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+D+ +W+++I G HG+ +AI+ F +M ++ PN +TF+GLL C+H G EG+
Sbjct: 269 RKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSHQGLVQEGVK 328
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
YF+ M ++ +++HYGCLVDL GRAG+LD+AL I+ D+ +W LL SC+ +
Sbjct: 329 YFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSSHN-DSVLWRILLGSCKIH 387
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+ I IAM L L G+ +LL+ IYA V+RMRK+I+S+ K TPG S
Sbjct: 388 KNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTTPGWSW 447
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIF 515
IE+ +V +FV D + + +++
Sbjct: 448 IEIGEQVHKFVVDDKSHRYSVEVY 471
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 285/512 (55%), Gaps = 40/512 (7%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
++ SC L++L K+IH ++++ + F+ + ++D+ G L A +F+Q++ N
Sbjct: 405 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKN 464
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +N+MI Y+ I L+++M + I P TL ++ +C+ + LG
Sbjct: 465 VVSWNSMIAGYSLKGDSKSCIELFRRMDEEG-----IRPTLTTLSSILMACSRSVNLQLG 519
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K IH ++ + +++ ++L+DLY KC
Sbjct: 520 KFIHGYIIRNRVEADIFVNSSLIDLYFKC------------------------------- 548
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A +F MP T +VSW MISGY +GSY EAL +F M+ G++PD I+ SVL
Sbjct: 549 GNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVL 608
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
PAC+QL LE G+ IH + ++ L V+ AL++MY KCG +++A +F+Q+ ERD V
Sbjct: 609 PACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFV 668
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+++I +HG+A +A+ LF +MQ+ P+ +TF+ +LSAC+H G +EG YF+ M
Sbjct: 669 SWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQM 728
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP-MKPDAKIWGSLLSSCRTYSNLE 435
++ + +EHY CL+DLLGR GRL +A I++ P ++ D + +L S+C + L+
Sbjct: 729 IAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLD 788
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ L+ +P+D Y++LSN+YA +W++V ++R I+ +KK PGCS IEV
Sbjct: 789 LGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVG 848
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
+ FV D + P I+ + +LA H ++
Sbjct: 849 KRIHPFVVEDKSHPQADMIYECMSILASHVEK 880
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 204/411 (49%), Gaps = 39/411 (9%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP-NVFLYNAMIRAYTN 89
K IH +I+ L + L +I++ S A L+F+ ++ P ++ L+N ++ A T
Sbjct: 215 KLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTK 274
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
N ++ + ++ ++L P + PD FT P V+K+C+GL GK +H HV K G
Sbjct: 275 NFIFIEGLEVFHRLLHFP----YLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFA 330
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+ ++ + +Y KC+ VFE+ A LFD+M
Sbjct: 331 MDVVVMSSAVGMYAKCN-------VFED------------------------AIKLFDEM 359
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P + SW +IS Y G +AL++F +M++ G +PD +++ +V+ +CA+L LE G+
Sbjct: 360 PERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGK 419
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
IHM ++ + +AL++MY KCGC+ A ++F+Q+ ++VVSW+++I G + G
Sbjct: 420 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 479
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+ I LF M + P T +L AC+ + G + R+ +E I
Sbjct: 480 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRN-RVEADIFVN 538
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS-CRTYSNLEIAVI 439
L+DL + G + A N+ + MP K + W ++S + S LE VI
Sbjct: 539 SSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMISGYVKVGSYLEALVI 588
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNNLISGY 193
LGK IH + GL+++ +L++LY C A VF+ + + DI WN L++
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMA-- 270
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF-RQMQMVGIEPDEISI 252
A + I E L+VF R + ++PD +
Sbjct: 271 -------------------------ACTKNFIFI----EGLEVFHRLLHFPYLKPDAFTY 301
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
SVL AC+ LG + G+ +H + K+ V+ ++ + MY KC A +LFD+M E
Sbjct: 302 PSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPE 361
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL-M 371
RDV SW+ VI G+ KA+ LF EM+ P+ +T ++S+CA G +
Sbjct: 362 RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEI 421
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + ++ ++ + LVD+ G+ G L+ A + E++ K + W S+++
Sbjct: 422 HMELVRSGFALDGFVS--SALVDMYGKCGCLEMAKEVFEQIQRK-NVVSWNSMIA 473
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 39/280 (13%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L +C L L+K IH I++ L + ++ ++D+ G + A +F Q+
Sbjct: 604 FTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 663
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLL 131
E + + +MI AY ++ A+ L+++M + PDK T ++ +C AGL+
Sbjct: 664 ERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAK-----PDKVTFLAILSACSHAGLV 718
Query: 132 ---CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD--RDIVAW 186
C + I ++G K + L+DL G+ L EA+++ + D D+
Sbjct: 719 DEGCYYFNQMI----AEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLL 774
Query: 187 NNLISG-----YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+ L S LG+ + R+L +K P ++ + + Y + + E V +++
Sbjct: 775 STLFSACHLHKKLDLGE-QIGRLLIEKDP-DDPSTYIILSNMYASVKKWDEVRKVRLKIK 832
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNH 279
+G++ + P C+ +E+G+ IH + DK+H
Sbjct: 833 ELGLKKN--------PGCSW---IEVGKRIHPFVVEDKSH 861
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/518 (35%), Positives = 292/518 (56%), Gaps = 18/518 (3%)
Query: 3 ARIGALSIKELEDRFVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDV-CNS 58
+R+ AL ++ F +L+ E L + + IH +ILK S F+ ++ N
Sbjct: 63 SRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYANC 122
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
+L A +F+++ E +V +N+MI AY AI L +M P++
Sbjct: 123 SENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKM-----------PERN 171
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+ + C GL + H+ + L++ ++ N+++ Y + ++ A +F +M
Sbjct: 172 IVTWNSVVC-GLSKAGNMELAHSVFEQMPLRNE-VSWNSMISGYVRIGDVRAAQSIFYQM 229
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
++ +V+W +ISGYA G +K A +F+ MP +VSW AMISGY H + +AL VF
Sbjct: 230 PEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFH 289
Query: 239 QMQMVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
M + G PD+ +++S+L ACA LGSLE G+WI+ Y KN L + NALI+M+ KC
Sbjct: 290 HMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKC 349
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G + A ++F M +R +++W+T++ GLA +GK +AI+LF +M P+D+ FI +L
Sbjct: 350 GDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVL 409
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
SAC H G EG FD M ++ I+ +IEHYGC+VDLLGRAG+L++A+ M +KP+
Sbjct: 410 SACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTARMHLKPN 469
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
A IW +LL C+ + N ++ E ++ EP + L+SN+ A GRWEDV R
Sbjct: 470 AVIWATLLFCCKIHGNGDLLKSVTEKIMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVA 529
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
+R + M+K PGCS I+V N V EF++ D K+I+
Sbjct: 530 MRQQRMEKVPGCSSIQVGNRVHEFLAKDTRHVQRKEIY 567
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 207/431 (48%), Gaps = 51/431 (11%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
+E + + ILQ C+N+ ELK+ H QI + L S+F++ K+I V ++ L YA+
Sbjct: 1 MEQKMLRILQHCKNIRELKQTHLQIFIHGLQHSDFMLPKLITVSSAFNLLDYAT------ 54
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ A+ +Y +M ++ + FT F++K
Sbjct: 55 --------------------HKEALRVYSRM-----KALMVEANSFTFTFLLKCFETSQA 89
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE-LIEAHKVFEEMTDRDIVAWNNLIS 191
G+ IH + K G S +N+LL Y C E L A++VFEEM +RD+++WN++IS
Sbjct: 90 LEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMIS 149
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
Y G+++ A L DKMP IV+W +++ G + G+ A VF QM + +E+S
Sbjct: 150 AYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKAGNMELAHSVFEQMPL----RNEVS 205
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-NALIEMYIKCGCINQASQLFDQM 310
S++ ++G + + I + +TV+ A+I Y G + A +F+ M
Sbjct: 206 WNSMISGYVRIGDVRAAQSIFY-----QMPEKTVVSWTAMISGYATNGDLKSAENIFNHM 260
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ-RLKVPPNDITFIGLLSACAHTGFWNEG 369
++VVSW+ +I G ++ + +A+ +FH M + P+ T I +LSACAH G G
Sbjct: 261 PVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHG 320
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS-- 427
+ +S + + + I L+D+ + G ++ A + M K W +++S
Sbjct: 321 -KWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMS-KRCIITWTTMVSGLA 378
Query: 428 ----CRTYSNL 434
CR NL
Sbjct: 379 VNGKCREAINL 389
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 264/456 (57%), Gaps = 26/456 (5%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A LF ++ E N +N ++ Y N + A ++ +M + + +I
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
+ L + + + G + E+ +D EA ++F+ M +D+V
Sbjct: 73 EEAELLFWRMPERNVVSWTVMLG----GLIEDGRVD---------EARQLFDMMPVKDVV 119
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA------------- 231
A N+I G G++ +AR +FD+MP +V+WT+MISG G+++
Sbjct: 120 ASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFEL 179
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL +F MQ G+ P S++SVL C L SL+ G +H ++ + + LI
Sbjct: 180 EALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLI 239
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
MYIKCG + A ++FD+ +D+V W+++I G A HG KA+ +FH+M + P++I
Sbjct: 240 TMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEI 299
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
TFIG+LSAC++TG EGL F+SMK + ++ K EHY C+VDLLGRAG+L++A+N+IE
Sbjct: 300 TFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIEN 359
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MP++ DA +WG+LL +CRT+ NL++A IA + LL LEP + G Y+LLSN+Y+ RW+DV
Sbjct: 360 MPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDV 419
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
+RK +R+K+++K+PGCS IEV+ +V F G T
Sbjct: 420 VELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGST 455
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 25/271 (9%)
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
EA K+F++M + + ++WN L+SGY + G + +AR +FDKMP +VSWTAMI GY G
Sbjct: 12 EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGL 71
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL-ELGEWIHMYCDKNHLLRRTVICN 288
EA +F +M E + +S +L + G + E + M K+ V
Sbjct: 72 IEEAELLFWRMP----ERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKD-----VVAST 122
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH-------------KAI 335
+I+ G + +A ++FD+M +R+VV+W+++I G + G +A+
Sbjct: 123 NMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEAL 182
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
LF MQR V P+ + I +LS C + G + R + I L+ +
Sbjct: 183 ALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRS-QFDIDIYVSSVLITM 241
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ G L A + + K D +W S+++
Sbjct: 242 YIKCGDLVTAKRVFDRFSSK-DIVMWNSIIA 271
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 41/289 (14%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T MID S G L A +F ++ + NV + +MI ++ + I +Y++ +
Sbjct: 122 TNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEA 181
Query: 110 GSL--------ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL 161
+L + P ++ V+ C L G+Q+H+ + + + L+ +
Sbjct: 182 LALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITM 241
Query: 162 YGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
Y KC +L+ A +VF+ + +DIV WN++I+GYA+ G +K
Sbjct: 242 YIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEK-------------------- 281
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHL 280
AL+VF M I PDEI+ + VL AC+ G ++ G E K +
Sbjct: 282 -----------ALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQV 330
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANH 328
+T ++++ + G +N+A L + M VE D + W ++G H
Sbjct: 331 DPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTH 379
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 17/199 (8%)
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
++GY + + ++AR LFDKMP T +SW ++SGY G +EA VF +M E +
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMP----ERNV 56
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+S +++ Q G +E E + + +++ TV+ LIE G +++A QLFD
Sbjct: 57 VSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIE----DGRVDEARQLFDM 112
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV---------PPNDITFIGLLSAC 360
M +DVV+ + +I GL + G+ +A +F EM + V +D T+ ++
Sbjct: 113 MPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIY 172
Query: 361 AHTGFWNEGLMYFDSMKRD 379
GF E L F M+R+
Sbjct: 173 ERKGFELEALALFSLMQRE 191
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 18 VPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
+ +L C +L L +++H+Q+++ ++ + +I + GDL A +F +
Sbjct: 201 ISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSS 260
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
++ ++N++I Y + A+ ++ M S I PD+ T V+ +C+
Sbjct: 261 KDIVMWNSIIAGYAQHGFGEKALEVFHDMF-----SSSIAPDEITFIGVLSACSYTGKVK 315
Query: 135 LGKQIHAHV-CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLISG 192
G +I + K+ + + ++DL G+ +L EA + E M + D + W L+
Sbjct: 316 EGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGA 375
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 269/506 (53%), Gaps = 50/506 (9%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG-----DLAYASLLFKQ 71
+P L C L L ++H +K L VT+++ +C G L+YA +F +
Sbjct: 34 LLPYLPQCTTLRALAQLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDR 93
Query: 72 VKEP-NVFLYNAMIRAYTNNHLYG-------LAINLYKQMLRDPRTGSLILPDKFTLPFV 123
+ P +V YN ++R Y G A ++ +ML + + PD +T +
Sbjct: 94 IPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEG-----VAPDTYTFVSL 148
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+K+CA G+Q H K G H L+++Y +C
Sbjct: 149 LKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAEC------------------ 190
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
G + AR +F ++ +VS+ AMI+ EAL +FR+MQ
Sbjct: 191 -------------GDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAK 237
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G++ ++++SVL ACA LG+LELG WIH Y K L + ALI+MY KCG + A
Sbjct: 238 GLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDA 297
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+F M RD +WS +I ANH +AI LF EM++ + P+D+TF+G+L AC+H+
Sbjct: 298 ISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHS 357
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G +EGL YFDSM R+ + I+HYGC+ DLL R+G+LD+A I+E+P+KP A +W +
Sbjct: 358 GLVSEGLQYFDSM-REFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRT 416
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LLS+C + + ++ E +L L+ G+YV+ SN+ A GRWE+++R+RKL+ K +
Sbjct: 417 LLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGV 476
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKP 509
K PGCS IEV+N V EF +GD P
Sbjct: 477 VKVPGCSSIEVDNRVHEFFAGDGRHP 502
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/504 (33%), Positives = 285/504 (56%), Gaps = 6/504 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG-GDLAYASLLFKQVKEPNVF 78
+L C+ L EL++IH + + L V+ I C + G +A A LF ++ P++
Sbjct: 20 LLAQCKKLRELQRIHALAIAHGLHPHQQSVSCKIFRCYADFGRVADARKLFDEIPNPDLI 79
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
+ +++ + AI+L+ +++ PD F + + + +G +G+
Sbjct: 80 SFTSLMSLHLQLDNQREAISLFARVVAAGHR-----PDGFAVVGALSASSGAGDQVVGRA 134
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+H + + GL + NAL+D+Y +C + A KVF+ M+ +D V W +++ GY +
Sbjct: 135 VHGLIFRLGLDGEVVVGNALIDMYSQCGKFESAVKVFDRMSLKDEVTWGSMLHGYIKCAG 194
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ A FD++P ++V+WTA+I+G+ AL++F +M + G P ++IV VL A
Sbjct: 195 VDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSA 254
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA +G+L+LG IH Y K + ++ NAL++MY K G I A +F ++ +D +W
Sbjct: 255 CADIGALDLGRVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTW 314
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+T+I G KA+ LF +M R V PN +TF+ +LSAC+H+G EG+ FD M++
Sbjct: 315 TTMISCCTVQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEGIELFDRMRQ 374
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+ I+ +EHYGC++DLLGR G L++A +I +M ++PD IW SLLS+C N +A
Sbjct: 375 LYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLLSACLVRGNNRLAE 434
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
IA + ++ EP D G YVLL N+YA +W + MR+ + S + K PGCS IE++ V
Sbjct: 435 IAGKEIVKREPGDDGVYVLLWNMYASSNKWREAREMRQQMLSLKIFKKPGCSWIEIDGAV 494
Query: 499 QEFVSGDDTKPFLKDIFWLLELLA 522
EF+ D T ++I+ LE ++
Sbjct: 495 HEFLVEDKTHDARREIYETLEYMS 518
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/517 (34%), Positives = 288/517 (55%), Gaps = 52/517 (10%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V +L +C N+ L + +H +K S+ ++D+ + G+L A+ +F ++
Sbjct: 299 LVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG 358
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ + + ++I AY LY AI L+ +M + PD +T+ ++ +CA
Sbjct: 359 DTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKG-----VRPDIYTVTSIVHACACSSSL 413
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+ +H++V K G+ S+ NAL+++Y KC
Sbjct: 414 DKGRDVHSYVIKNGMGSNLPVTNALINMYAKC---------------------------- 445
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G +++AR++F K+P IVSW MI GY+ EAL++F MQ +PD+I++
Sbjct: 446 ---GSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMA 501
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRT------VICNALIEMYIKCGCINQASQLF 307
VLPACA L +L+ G IH H+LRR V C AL++MY KCG + A LF
Sbjct: 502 CVLPACAGLAALDKGREIH-----GHILRRGYFSDLHVAC-ALVDMYAKCGLLVLAQLLF 555
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D + ++D++SW+ +I G HG ++AI F+EM+ + P++ +F +L+AC+H+G N
Sbjct: 556 DMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLN 615
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EG +F+SM+ + +E K+EHY C+VDLL R G L +A IE MP+KPD IWG LLS
Sbjct: 616 EGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 675
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR + ++++A EH+ LEP++T YV+L+N+YA+ +WE+V ++RK ++ + K+ P
Sbjct: 676 CRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNP 735
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
GCS IEV + FV+G+ P K I LL L +
Sbjct: 736 GCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQ 772
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 210/421 (49%), Gaps = 55/421 (13%)
Query: 15 DRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
+ + +LQ C ++L + K++H+ I+ +S L K++ + + GDL +F +
Sbjct: 95 NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDK 154
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ VFL+N ++ Y + +++L+K+M + G+ +T V+K A L
Sbjct: 155 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNC-----YTFTCVLKCFAALG 209
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
K++H +V K G S++ N+L+ Y K + AH +F+E+++ D+V+WN++I+
Sbjct: 210 KVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMIN 269
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G +++G++ G L++F QM ++G+E D +
Sbjct: 270 G--------------------------CVVNGFSGNG-----LEIFIQMLILGVEVDLTT 298
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VSVL ACA +G+L LG +H + K V N L++MY KCG +N A+++F +M
Sbjct: 299 LVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG 358
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+ +VSW+++I G AI LF EMQ V P+ T ++ ACA + ++G
Sbjct: 359 DTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG-- 416
Query: 372 YFDSMKRDHH-------IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
RD H + + L+++ + G +++A + ++P+K D W ++
Sbjct: 417 ------RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTM 469
Query: 425 L 425
+
Sbjct: 470 I 470
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
F ++ + A I+ + +G A+++ + + E S SVL CA+ SL
Sbjct: 53 FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSK--SYELGLNSYCSVLQLCAEKKSL 110
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
E G+ +H N + + L+ MY+ CG + Q ++FD+++ V W+ ++
Sbjct: 111 EDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 170
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A G +++ LF +MQ+L V N TF +L A G E KR H K
Sbjct: 171 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE-------CKRVHGYVLK 223
Query: 386 IEH------YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
+ L+ + G ++ A N+ +E+ +PD W S+++ C
Sbjct: 224 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGC 271
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 273/487 (56%), Gaps = 44/487 (9%)
Query: 76 NVFLYNAMIRAYTNNHLYGL-----AINLYKQMLRD--PRTGSLILPDKFTLPFVIKSCA 128
NV+L+ A I AY + L A+ L++ MLR PR P+ FT V++ C+
Sbjct: 75 NVYLWTATIAAYARHASSSLSAAEGALALFRLMLRRGVPR------PNAFTASSVVRCCS 128
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM---------- 178
L G Q+H + GL S AL+D+YG + +A +VF+EM
Sbjct: 129 ALRAVREGIQVHGFLFSAGLGRASHVGAALVDMYGSLGRVADARRVFDEMPSTNVVLGNT 188
Query: 179 ---------------------TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSW 217
+RD ++WN L+ GY R G+ AR LF++MP + SW
Sbjct: 189 MVACYVRAGDVEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGVARDLFEEMPDRNVNSW 248
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
+I+ + G +A+A++VF +M++ +PD ++ ++ ACAQLGSL + +H K
Sbjct: 249 NMVIAACSQEGLWADAVEVFNRMRLARFQPDPATMAVLMSACAQLGSLSIASQVHGILRK 308
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + N+LI+MY KCG ++QA LF + +D VS++ +I LA HG A+ +
Sbjct: 309 GCVEMNFHVLNSLIDMYAKCGSVSQAHLLFVETRLKDTVSYNVMICALAQHGHGRDALQI 368
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F EM + P+ +TF+G+LSACAH G ++G YF+SM+ ++ IE +HY C+VDL G
Sbjct: 369 FDEMSEEGLQPDAVTFLGVLSACAHAGLVHDGKFYFESMRTNYAIEQSPDHYACMVDLYG 428
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
RAG +++A + MP+KP A +WG+L+++CR + N+E+ +A L+ +EP + G YVL
Sbjct: 429 RAGLIEEAYQLARAMPVKPHAGVWGALINACRKHCNVEVGKVAARELIAIEPGNPGTYVL 488
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWL 517
L+N A+ +W+ V + + +R K ++KT GCS +EV+ V EF+ G+ + P +I+ +
Sbjct: 489 LANTLARGQQWDFVETVWQSMRGKGIEKTAGCSWLEVDRVVHEFLMGESSHPNSDEIYCI 548
Query: 518 LELLALH 524
LE L L
Sbjct: 549 LEHLYLQ 555
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 259/472 (54%), Gaps = 36/472 (7%)
Query: 48 LVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDP 107
L T +ID+ +LAYA +F + + ++ + AMI AY + + + L+ +ML
Sbjct: 264 LCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKML--- 320
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
G + P++ T+ ++K C LGK +HA + G + A +D+YGKC
Sbjct: 321 --GEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKC-- 376
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
G ++ AR +FD ++ W+AMIS Y
Sbjct: 377 -----------------------------GDVRSARSVFDSFKSKDLMMWSAMISSYAQN 407
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
EA D+F M GI P+E ++VS+L CA+ GSLE+G+WIH Y DK + ++
Sbjct: 408 NCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILK 467
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+ ++MY CG I+ A +LF + +RD+ W+ +I G A HG A+ LF EM+ L V
Sbjct: 468 TSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVT 527
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
PNDITFIG L AC+H+G EG F M + K+EHYGC+VDLLGRAG LD+A
Sbjct: 528 PNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHE 587
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I+ MPM+P+ ++GS L++C+ + N+++ A + L LEP +G VL+SNIYA R
Sbjct: 588 LIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANR 647
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
W DV+ +R+ ++ + + K PG S IEVN + EF+ GD P K ++ +++
Sbjct: 648 WGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMID 699
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 171/357 (47%), Gaps = 46/357 (12%)
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS- 134
N +++ +I +Y N+ A +Y M G+ D F +P V+K+C L PS
Sbjct: 88 NAAIHSFLITSYIKNNCPADAAKIYAYM-----RGTDTEVDNFVIPSVLKACC--LIPSF 140
Query: 135 -LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+++H V K G D+ N LI Y
Sbjct: 141 LLGQEVHGFVVKNGFHG-------------------------------DVFVCNALIMMY 169
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ +G + AR+LFDK+ +VSW+ MI Y G EALD+ R M ++ ++P EI ++
Sbjct: 170 SEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMI 229
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI--CNALIEMYIKCGCINQASQLFDQMV 311
S+ A+L L+LG+ +H Y +N ++ + C ALI+MY+KC + A ++FD +
Sbjct: 230 SITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLS 289
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-L 370
+ ++SW+ +I + ++ + LF +M + PN+IT + L+ C G G L
Sbjct: 290 KASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKL 349
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
++ +++ + + +D+ G+ G + A ++ + K D +W +++SS
Sbjct: 350 LHAFTLRNGFTLSLVLA--TAFIDMYGKCGDVRSARSVFDSFKSK-DLMMWSAMISS 403
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 157/335 (46%), Gaps = 43/335 (12%)
Query: 28 IELKKI-HTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+EL K+ H L+ + S L T ID+ GD+ A +F K ++ +++AMI +
Sbjct: 344 LELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISS 403
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
Y N+ A +++ M TG I P++ T+ ++ CA +GK IH+++ K
Sbjct: 404 YAQNNCIDEAFDIFVHM-----TGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQ 458
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
G+K I + + +D+Y C ++ AH++F E TDRDI WN +ISG+A G +
Sbjct: 459 GIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEA----- 513
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
AL++F +M+ +G+ P++I+ + L AC+ G L+
Sbjct: 514 --------------------------ALELFEEMEALGVTPNDITFIGALHACSHSGLLQ 547
Query: 267 LGEWI-HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
G+ + H + + ++++ + G +++A +L M R ++ V G
Sbjct: 548 EGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIA---VFGSF 604
Query: 326 ANHGKAHKAIHL--FHEMQRLKVPPNDITFIGLLS 358
K HK I L + Q L + P+ + L+S
Sbjct: 605 LAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMS 639
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 13/182 (7%)
Query: 10 IKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS 66
I+ E V +L C L K IH+ I K + L T +D+ + GD+ A
Sbjct: 425 IRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAH 484
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
LF + + ++ ++NAMI + + A+ L+++M + P+ T + +
Sbjct: 485 RLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEM-----EALGVTPNDITFIGALHA 539
Query: 127 CA--GLLCPSLGKQI-HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
C+ GLL GK++ H V +FG ++DL G+ L EAH++ + M R
Sbjct: 540 CSHSGLL--QEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPN 597
Query: 184 VA 185
+A
Sbjct: 598 IA 599
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/464 (37%), Positives = 281/464 (60%), Gaps = 12/464 (2%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L+ A LL Q +V + ++I AY+ A++ +K ML + I PD T
Sbjct: 188 GMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEG-----IAPDDVT 242
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN---ALLDLYGKCDELIEAHKVFE 176
+ V+ +C+ L LG +H+ V + G+ S++EN AL+D+Y KC + A +VF+
Sbjct: 243 VIGVLSACSQLKDLELGCSLHSLVKEKGM---SMSENLVVALIDMYAKCGDFGHAREVFD 299
Query: 177 EM-TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
+ R +WN +I GY + G + AR LFD+M I+++ +MI+GY H G EAL
Sbjct: 300 AVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALL 359
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
+F M+ + D ++VS+L ACA LG+L G +H + + I AL++MY+
Sbjct: 360 LFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYM 419
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
KCG +N+A+ +F +M +RDV +W+ +I GLA +G + F++M+ PN +++I
Sbjct: 420 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIA 479
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+L+AC+H+ NEG +YFD M+ ++I +IEHYGC++DLLGR+G LD+A+++++ MPM+
Sbjct: 480 VLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQ 539
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
P++ IW S+LS+CR + +++A A EHLL +EP++ YV L NI +WED S++R
Sbjct: 540 PNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIR 599
Query: 476 KLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
L+ + +KKT G S + V +V +FV D + P + +I +LE
Sbjct: 600 MLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLE 643
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 201/407 (49%), Gaps = 54/407 (13%)
Query: 62 LAYASLLFKQVKEPNVFLYN----AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
L YA LF ++ + FL++ A RA T++ + L+++M R + + PD
Sbjct: 53 LRYALHLFDRMPA-STFLFDTALRACFRAGTSSGDPDIPFVLFRRMRR-----AAVRPDG 106
Query: 118 FTLPFVIKSCA-----GLLCPSLGKQIHAHVCKFGLKSHS-ITENALLDLYGKCDELIEA 171
FT F+ K + LLC +HA + L S + N+L+ +Y + +
Sbjct: 107 FTFHFLFKCSSSSRPRALLC----TMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDV 162
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
+ F+E+ +D V+W +ISG A++G + AR+L + P ++SWT++I+ Y+
Sbjct: 163 RRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAK 222
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EA+D F+ M GI PD+++++ VL AC+QL LELG +H + + + ALI
Sbjct: 223 EAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALI 282
Query: 292 EMYIKCG----------------------------C----INQASQLFDQMVERDVVSWS 319
+MY KCG C ++ A LFDQM RD+++++
Sbjct: 283 DMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFN 342
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++I G + G+ +A+ LF M+R + ++ T + LLSACA G +G ++
Sbjct: 343 SMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIEL- 401
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+E I L+D+ + GR+++A + + M K D W ++++
Sbjct: 402 RLVETDIYIGTALLDMYMKCGRVNEATIVFQRMG-KRDVHAWTAMIA 447
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 222/488 (45%), Gaps = 55/488 (11%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSN-FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
Q+ E L + +++H +LK SN FL ++D+ ++ GD + +V +
Sbjct: 906 QNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISW 965
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS------ 134
N+++ Y + A+ KQML + S I+S LL S
Sbjct: 966 NSILSMYADRGHMKEAVYYLKQMLWHGKMPS------------IRSFVSLLALSGKTGDW 1013
Query: 135 -LGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
LG QIH V K G S+ + L+D+YGKC + +F E+ + N+LI+
Sbjct: 1014 QLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITS 1073
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
R +FD AL++ M + G+ PD+++
Sbjct: 1074 SLRCN-------MFDA------------------------ALEILHCMIVEGVTPDDVTF 1102
Query: 253 VSVLPACAQLGSLELG--EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ + A + S L + +H K +C++LI Y G ++ + +F+ +
Sbjct: 1103 SATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGL 1162
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
++ +V+ ++ +I A +G +A+ LF +M + P+++TF+ ++ C G + EG
Sbjct: 1163 LDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGR 1222
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+ + M+ ++ H+ C+V+LL R G + +A+ ++E+ P++ K W SLL SC+
Sbjct: 1223 LVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKA 1282
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ + A L+ + +D + +SN + G E R++++ K +KK+ G S
Sbjct: 1283 HGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKS-GHS 1341
Query: 491 LIEVNNEV 498
LIEV++
Sbjct: 1342 LIEVSHRA 1349
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 167/392 (42%), Gaps = 80/392 (20%)
Query: 18 VPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV-- 72
+ +L +C L +L+ +H+ + + +S S LV +ID+ GD +A +F V
Sbjct: 244 IGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGR 303
Query: 73 -KEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILP--------------- 115
+ P +NA+I Y + +A +L+ QM +RD T + ++
Sbjct: 304 GRRPQS--WNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLF 361
Query: 116 ----------DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
D FT+ ++ +CA L G+ +HA + +++ ALLD+Y KC
Sbjct: 362 MNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKC 421
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
+ EA VF+ M RD+ AW TAMI+G
Sbjct: 422 GRVNEATIVFQRMGKRDVHAW-------------------------------TAMIAGLA 450
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL---- 281
G L+ F QM+ G +P+ +S ++VL AC+ L G +Y D+ +L
Sbjct: 451 FNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGR---LYFDEMRILYNIH 507
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
+ +I++ + G +++A L M ++ + V W++++ + HK I L
Sbjct: 508 PQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSAC----RVHKRIDLAQC 563
Query: 341 MQR--LKVPPN-DITFIGLLSACAHTGFWNEG 369
LK+ P+ D ++ L + C + W +
Sbjct: 564 AAEHLLKIEPDEDAVYVQLYNICIDSRKWEDA 595
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 107/268 (39%), Gaps = 17/268 (6%)
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
M + S MI+G+ G A V+R M GI + ++L C+ +L+L
Sbjct: 757 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQL- 815
Query: 269 EWIHMYCDKNHLLRRTVICN-----ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
+L + CN AL+ Y+ + + LF ++ ++ + V+
Sbjct: 816 --------HGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLR 867
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW-NEGLMYFDSMKRDHHI 382
GL N + I F +M+R + N +++ + C G W +G + + I
Sbjct: 868 GLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWI 927
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
I LVDL G + + ++ + D W S+LS +++ AV ++
Sbjct: 928 PSNIFLSNSLVDLYSAIGDSVDTVKALNDI-LSEDVISWNSILSMYADRGHMKEAVYYLK 986
Query: 443 HLLVL-EPEDTGNYVLLSNIYAKHGRWE 469
+L + ++V L + K G W+
Sbjct: 987 QMLWHGKMPSIRSFVSLLALSGKTGDWQ 1014
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 197/570 (34%), Positives = 300/570 (52%), Gaps = 71/570 (12%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTK----------------MIDVCNSG 59
+ V +C +L E +++ + K + NF+V++ M++ G
Sbjct: 139 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 198
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
AS LF ++ + +V +N+MI Y +N L + +YKQM+ I D T
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-----IDVDLAT 253
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ V+ CA SLGK +H+ K + N LLD+Y KC +L A +VFE+M
Sbjct: 254 IISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 180 DRDIVAWNNLISGYARLG----------QMKKARMLFDKMPYTTIVS------------- 216
+R++V+W ++I+GY R G QM+K + D + T+I+
Sbjct: 314 ERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 373
Query: 217 ----------------WTAMISGYTHIGSYAEALDVFRQM---------QMVG-IEPDEI 250
A++ Y GS A VF M MVG ++PD
Sbjct: 374 VHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSR 433
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++ +LPACA L +LE G+ IH Y +N + NAL+++Y+KCG + A LFD +
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+D+VSW+ +I G HG ++AI F+EM+ + P++++FI +L AC+H+G +G
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+F MK D +IE K+EHY C+VDLL R G L +A IE +P+ PDA IWG+LL CR
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRI 613
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
Y ++E+A E + LEPE+TG YVLL+NIYA+ + E+V RMR+ I K ++K PGCS
Sbjct: 614 YHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCS 673
Query: 491 LIEVNNEVQEFVSGDDTK-PFLKDIFWLLE 519
IE+ V FVSG+++ P K I LL+
Sbjct: 674 WIEIKGRVNLFVSGNNSSHPHSKKIESLLK 703
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 181/355 (50%), Gaps = 44/355 (12%)
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN-----ALLDLYGKCDELIEAHK 173
T V++ CAGL + GK++H+ + KS+S+ + L+ Y C +L E +
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSII-----KSNSVGVDEALGLKLVSFYATCGDLKEGRR 155
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKK--------------------ARMLFDKMPYTT 213
VF+ M +++ WN ++S YA++G K+ A LFDK+
Sbjct: 156 VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRD 215
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
++SW +MISGY G L +++QM +GI+ D +I+SVL CA G+L LG+ +H
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
K+ RR N L++MY KCG ++ A ++F++M ER+VVSW+++I G G +
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDG 335
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
AI L +M++ V + + +L ACA +G + G D +K + ++ + L+
Sbjct: 336 AIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN-NMASNLFVCNALM 394
Query: 394 DLLGRAGRLDQALNIIEEM-------------PMKPDAKIWGSLLSSCRTYSNLE 435
D+ + G ++ A ++ M +KPD++ +L +C + S LE
Sbjct: 395 DMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALE 449
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 55/264 (20%)
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
+ + A I + +G A+++ Q +E SVL CA L SL G+ +H
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTYG--SVLQLCAGLKSLTDGKKVHS 123
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQ------------------------------- 302
N + + L+ Y CG + +
Sbjct: 124 IIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE 183
Query: 303 --------------------ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
AS+LFD++ +RDV+SW+++I G ++G + + ++ +M
Sbjct: 184 SICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
L + + T I +L CA++G + G S+ E +I L+D+ + G L
Sbjct: 244 YLGIDVDLATIISVLVGCANSGTLSLG-KAVHSLAIKSSFERRINFSNTLLDMYSKCGDL 302
Query: 403 DQALNIIEEMPMKPDAKIWGSLLS 426
D AL + E+M + + W S+++
Sbjct: 303 DGALRVFEKMGER-NVVSWTSMIA 325
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 285/512 (55%), Gaps = 40/512 (7%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
++ SC L++L K+IH ++++ + F+ + ++D+ G L A +F+Q++ N
Sbjct: 213 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKN 272
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +N+MI Y+ I L+++M + I P TL ++ +C+ + LG
Sbjct: 273 VVSWNSMIAGYSLKGDSKSCIELFRRMDEEG-----IRPTLTTLSSILMACSRSVNLQLG 327
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K IH ++ + +++ ++L+DLY KC
Sbjct: 328 KFIHGYIIRNRVEADIFVNSSLIDLYFKC------------------------------- 356
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A +F MP T +VSW MISGY +GSY EAL +F M+ G++PD I+ SVL
Sbjct: 357 GNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVL 416
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
PAC+QL LE G+ IH + ++ L V+ AL++MY KCG +++A +F+Q+ ERD V
Sbjct: 417 PACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFV 476
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+++I +HG+A +A+ LF +MQ+ P+ +TF+ +LSAC+H G +EG YF+ M
Sbjct: 477 SWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQM 536
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP-MKPDAKIWGSLLSSCRTYSNLE 435
++ + +EHY CL+DLLGR GRL +A I++ P ++ D + +L S+C + L+
Sbjct: 537 IAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLD 596
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ L+ +P+D Y++LSN+YA +W++V ++R I+ +KK PGCS IEV
Sbjct: 597 LGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVG 656
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
+ FV D + P I+ + +LA H ++
Sbjct: 657 KRIHPFVVEDKSHPQADMIYECMSILASHVEK 688
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 214/429 (49%), Gaps = 42/429 (9%)
Query: 16 RFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
+ + +L++C + LK+ IH +I+ L + L +I++ S A L+F+ +
Sbjct: 5 KLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTI 64
Query: 73 KEP-NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ P ++ L+N ++ A T N ++ + ++ ++L P + PD FT P V+K+C+GL
Sbjct: 65 ENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFP----YLKPDAFTYPSVLKACSGLG 120
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
GK +H HV K G + ++ + +Y KC+ VFE+
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCN-------VFED-------------- 159
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
A LFD+MP + SW +IS Y G +AL++F +M++ G +PD ++
Sbjct: 160 ----------AIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVT 209
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+ +V+ +CA+L LE G+ IHM ++ + +AL++MY KCGC+ A ++F+Q+
Sbjct: 210 LTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQ 269
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
++VVSW+++I G + G + I LF M + P T +L AC+ + G
Sbjct: 270 RKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKF 329
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS-CRT 430
+ R+ +E I L+DL + G + A N+ + MP K + W ++S +
Sbjct: 330 IHGYIIRN-RVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMISGYVKV 387
Query: 431 YSNLEIAVI 439
S LE VI
Sbjct: 388 GSYLEALVI 396
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 143/314 (45%), Gaps = 37/314 (11%)
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
D L ++K+C GK IH + GL+++ +L++LY C A VF
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 176 EEMTDR-DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
+ + + DI WN L++ A + I E L
Sbjct: 62 QTIENPLDITLWNGLMA---------------------------ACTKNFIFI----EGL 90
Query: 235 DVF-RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
+VF R + ++PD + SVL AC+ LG + G+ +H + K+ V+ ++ + M
Sbjct: 91 EVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGM 150
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
Y KC A +LFD+M ERDV SW+ VI G+ KA+ LF EM+ P+ +T
Sbjct: 151 YAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTL 210
Query: 354 IGLLSACAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
++S+CA G ++ + ++ ++ + LVD+ G+ G L+ A + E++
Sbjct: 211 TTVISSCARLLDLERGKEIHMELVRSGFALDGFVS--SALVDMYGKCGCLEMAKEVFEQI 268
Query: 413 PMKPDAKIWGSLLS 426
K + W S+++
Sbjct: 269 QRK-NVVSWNSMIA 281
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 39/280 (13%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L +C L L+K IH I++ L + ++ ++D+ G + A +F Q+
Sbjct: 412 FTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 471
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLL 131
E + + +MI AY ++ A+ L+++M + PDK T ++ +C AGL+
Sbjct: 472 ERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAK-----PDKVTFLAILSACSHAGLV 526
Query: 132 ---CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD--RDIVAW 186
C + I ++G K + L+DL G+ L EA+++ + D D+
Sbjct: 527 DEGCYYFNQMI----AEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLL 582
Query: 187 NNLISG-----YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+ L S LG+ + R+L +K P ++ + + Y + + E V +++
Sbjct: 583 STLFSACHLHKKLDLGE-QIGRLLIEKDP-DDPSTYIILSNMYASVKKWDEVRKVRLKIK 640
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNH 279
+G++ + P C+ +E+G+ IH + DK+H
Sbjct: 641 ELGLKKN--------PGCSW---IEVGKRIHPFVVEDKSH 669
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 37/224 (16%)
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D ++S+L C L+ G+ IH L +C +LI +Y C + Q+++L
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCH-LFQSAKLV 60
Query: 308 DQMVER--DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTG 364
Q +E D+ W+ ++ + + + +FH + + P+ T+ +L AC+ G
Sbjct: 61 FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 365 FWNEGLM-----------------------------YFDSMKR-DHHIEHKIEHYGCLVD 394
G M + D++K D E + + ++
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 395 LLGRAGRLDQALNIIEEMPM---KPDAKIWGSLLSSCRTYSNLE 435
+ G+ ++AL + EEM + KPD+ +++SSC +LE
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLE 224
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 279/532 (52%), Gaps = 70/532 (13%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L SC++L L +IH QI+ + +T +I++ + A +F P+ L
Sbjct: 58 LLSSCKHLNPLLQIHAQIIVSGFKHHH-SITHLINLYSLFHKCDLARSVFDSTPNPSRIL 116
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N+MIRAYT + Y A+ +Y M+
Sbjct: 117 WNSMIRAYTRSKQYNEALEMYYCMVE---------------------------------- 142
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
K GL+ L+D+Y K +L A +VF++M RD+VAWN +I+G ++
Sbjct: 143 -----KGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDP 197
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF---------------------- 237
AR +FD+M VSW M++GY H G + E L++F
Sbjct: 198 YVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGH 257
Query: 238 --------RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
QM++ P+ ++ VSVLPA A L + G H + L T++ N+
Sbjct: 258 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 317
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI+MY KCG ++ + +LF++M +D VSW+ ++ G A HG +AI LF MQ +V +
Sbjct: 318 LIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQID 377
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
++F+ +LSAC H G EG F SM +HI+ +EHY C+VDLLGRAG D+ L I
Sbjct: 378 SVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFI 437
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
+ MP++PDA +WG+LL SCR +SN+++ +A++HL+ LEP + ++V+LS+IYA+ GRW
Sbjct: 438 KVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWA 497
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
D + R + +KKTPGCS +E+ N+V F GD + P L+ + L L
Sbjct: 498 DAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTL 549
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 126/314 (40%), Gaps = 36/314 (11%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L + L ++ H I++ + + +ID+ G L Y+ LF ++
Sbjct: 280 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD 339
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLL 131
+ +NAM+ Y + AI L+ M S + D + V+ +C AGL+
Sbjct: 340 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE-----SQVQIDSVSFVSVLSACRHAGLV 394
Query: 132 CPSLGKQI-HAHVCKFGLKSHSITENALLDLYGKC---DELIEAHKVFEEMTDRDIVAWN 187
G++I H+ K+ +K ++DL G+ DE + KV + D W
Sbjct: 395 --EEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMP--VEPDAGVWG 450
Query: 188 NLISGYARLGQMKKARMLFD---KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
L+ +K + D K+ + + S Y G +A+A +M +G
Sbjct: 451 ALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLG 510
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMY--CDKNH--LLRRTVICNALIEMYIKCGCI 300
++ P C+ +EL +H + DK+H L ++ N L+E K G +
Sbjct: 511 LKKT--------PGCSW---VELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYV 559
Query: 301 NQASQLFDQMVERD 314
S + + E D
Sbjct: 560 PDRSCVLQNVEEED 573
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 288/555 (51%), Gaps = 68/555 (12%)
Query: 1 MAARIGALSIKELEDRFVPILQSCENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSG 59
M + G++++ + + IL S ++L ++IH QI K+ F+ + ++D+
Sbjct: 127 MMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKT 186
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAY-------------------------------T 88
G + A+ +F+++ E N+ +YN MI T
Sbjct: 187 GFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLT 246
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
N L+ A++ +K+M + D+FT V+ +C G L GKQIHA++ +
Sbjct: 247 QNGLFKEAVDKFKEMGIEG-----FCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDY 301
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ + +ALLD+Y KC +K A +F K
Sbjct: 302 QDNIFVGSALLDMYCKCR-------------------------------NVKYAEAVFRK 330
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
M + ++SWTAM+ GY G EA+ +F MQ I PD+ ++ SV+ +CA L SLE G
Sbjct: 331 MRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEG 390
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
H + L+ + NALI +Y KCG + A QLF +M RD VSW+ ++ G A
Sbjct: 391 AQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQF 450
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
GKA++ I LF M + P+ +TF+G+LSAC+ G +G YF+ M ++H I +H
Sbjct: 451 GKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDH 510
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
Y C++DLL RAGRL++A N I +MP PDA W +LLSSCR NLEI A E L LE
Sbjct: 511 YTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLE 570
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
P++ +Y+LLS+IYA G+W+DV+++RK +R +KK PG S I+ N+V F + D +
Sbjct: 571 PQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSS 630
Query: 509 PFLKDIFWLLELLAL 523
PF I+ LE L L
Sbjct: 631 PFSDQIYAKLESLYL 645
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 229/457 (50%), Gaps = 41/457 (8%)
Query: 24 CE--NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYN 81
CE N ++KK+H +I++ L + FL +I+ GDL A +F + +PN+F +N
Sbjct: 16 CEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWN 75
Query: 82 AMIRAYT-------------------------------NNHLYGLAINLYKQMLRDPRTG 110
++ AY+ N L ++ +Y ML+D G
Sbjct: 76 TLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKD---G 132
Query: 111 SLILPD-KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
S+ L F+ ++ S G + LG+QIH + KFG +S+ + L+D+Y K +
Sbjct: 133 SVNLNRITFSTMLILSSNRGFV--DLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFIN 190
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A+++FEE+ +++IV +N +I+G R + +A LFD MP +SWT +I+G T G
Sbjct: 191 DANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGL 250
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ EA+D F++M + G D+ + SVL AC +L+ G+ IH Y + + +A
Sbjct: 251 FKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSA 310
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
L++MY KC + A +F +M ++V+SW+ ++ G +G + +A+ +F +MQR ++ P+
Sbjct: 311 LLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPD 370
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
D T ++S+CA+ EG + I + L+ L G+ G L+ A +
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHGQALASGLICF-VTVSNALITLYGKCGSLEHAHQLF 429
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
EM ++ D W +L+S + + E +L
Sbjct: 430 HEMKIR-DEVSWTALVSGYAQFGKANETISLFETMLA 465
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 194/570 (34%), Positives = 302/570 (52%), Gaps = 71/570 (12%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTK----------------MIDVCNSG 59
+ V +C +L E +++ + K + NF+V++ M++ G
Sbjct: 139 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 198
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
A LF ++ + +V +N+MI Y +N L + +YKQM+ I D T
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-----IDVDLAT 253
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ V+ CA SLGK +H+ K + N LLD+Y KC +L A +VFE+M
Sbjct: 254 IISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 180 DRDIVAWNNLISGYARLG----------QMKKARMLFDKMPYTTIVS------------- 216
+R++V+W ++I+GY R G QM+K + D + T+I+
Sbjct: 314 ERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 373
Query: 217 ----------------WTAMISGYTHIGSYAEALDVFRQM---------QMVG-IEPDEI 250
A++ Y GS A VF M M+G ++PD
Sbjct: 374 VHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSR 433
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++ VLPACA L +LE G+ IH Y +N + NAL+++Y+KCG + A LFD +
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+D+VSW+ +I G HG ++AI F+EM+ + P++++FI +L AC+H+G +G
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+F MK D +IE K+EHY C+VDLL R G L +A IE +P+ PDA IWG+LL CR
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRN 613
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
Y ++E+A E + LEPE++G YVLL+NIYA+ +WE+V R+R+ I + ++K PGCS
Sbjct: 614 YHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCS 673
Query: 491 LIEVNNEVQEFVSGDDTK-PFLKDIFWLLE 519
IE+ +V FVSG+++ P K+I LL+
Sbjct: 674 WIEIKGKVNLFVSGNNSSHPHSKNIESLLK 703
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 183/355 (51%), Gaps = 44/355 (12%)
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN-----ALLDLYGKCDELIEAHK 173
T V++ CAGL + GK++H+ + KS+S+ + L+ Y C +L E +
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSII-----KSNSVGVDEALGLKLVSFYATCGDLKEGRR 155
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKK--------------------ARMLFDKMPYTT 213
VF+ M +++ WN ++S YA++G K+ A LFDK+
Sbjct: 156 VFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRD 215
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
++SW +MISGY G L +++QM +GI+ D +I+SVL CA G+L LG+ +H
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
K+ RR N L++MY KCG ++ A ++F++M ER+VVSW+++I G G++
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
AI L +M++ V + + +L ACA +G + G D +K + ++E + L+
Sbjct: 336 AIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALM 394
Query: 394 DLLGRAGRLDQALNIIEEM-------------PMKPDAKIWGSLLSSCRTYSNLE 435
D+ + G ++ A ++ M +KPD++ +L +C + S LE
Sbjct: 395 DMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALE 449
>gi|41469497|gb|AAS07282.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 476
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 266/481 (55%), Gaps = 9/481 (1%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVC-NSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
+ L+++H ++K L++ ++ + C G D AYA+ L + PN F++N IR
Sbjct: 1 MAHLRQLHAALVKSGLARDPIAASRAVAFCAGDGRDAAYAARLVRHHPRPNAFMWNTAIR 60
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
A + G A+ L+ ML GS P++ T P + + A L G +H V K
Sbjct: 61 ALADGPGPGAAVALFVDML-----GSPTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVK 115
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
GL + N+++ +Y EA + D VA N+ I AR G++ +AR +
Sbjct: 116 LGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALARAGRVDEARAV 175
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
FD MP T+ +W+AM+S Y+ +A+++F MQ G+EP+ +VSVL CA LG+L
Sbjct: 176 FDGMPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVSVLGCCASLGAL 235
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD---VVSWSTVI 322
E G W+H Y DK+ + ++ AL++MY KCG I +A ++FD R + SW++++
Sbjct: 236 EQGAWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWNSMM 295
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
G A HG+ +A LF E++ + P+++TFI +L A H+G +E SM +H +
Sbjct: 296 LGHAVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVLASMASEHGV 355
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
+EHYGCLVD L RAGRL +A I MP+ PDA +WG+LLS CR + + E A A
Sbjct: 356 VPGVEHYGCLVDALARAGRLREAEGAIAAMPVAPDAAVWGALLSGCRLHGDAEAAARAAR 415
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
+ +P D+G YVL ++ A+ G + +R +R + + K PGCS+IEV+ V EFV
Sbjct: 416 EAVRCDPRDSGAYVLAASALARGGEARRGAAVRGRMREEGVGKVPGCSMIEVDGVVHEFV 475
Query: 503 S 503
S
Sbjct: 476 S 476
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 277/504 (54%), Gaps = 38/504 (7%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQ 71
E + +LQ C +L L+KIH ++ L + K+++ C + G LAYA LLF Q
Sbjct: 4 EKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQ 63
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ P +N++IR + + AI Y QM+ D S +PD FT FV+K+C +
Sbjct: 64 MECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCD----SFSIPDTFTFSFVLKACERIK 119
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
K++H V + G D D++ NL+
Sbjct: 120 AERKCKEVHGSVIRCGY-------------------------------DADVIVCTNLVK 148
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
Y+ +G + AR +FDKMP +V+W AMIS ++ G + EAL + QM+ ++ D +
Sbjct: 149 CYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDVDGFT 208
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V ++ +CA LG+L +G +H + +N L + + NALI+MY KCG ++QA +FD+M
Sbjct: 209 LVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRMQ 268
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+D+ +W+++I G HG+ +AI+ F +M ++ PN +TF+GLL C+H G EG+
Sbjct: 269 RKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSHQGLVQEGVK 328
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
YF+ M ++ +++HYGCLVDL GRAG+LD+AL I+ D+ +W LL SC+ +
Sbjct: 329 YFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSSHN-DSVLWRILLGSCKIH 387
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+ I IAM L L G+ +LL+ IYA V+RMRK+I+S+ K TPG S
Sbjct: 388 KNVTIGEIAMNRLSELGATSAGDCILLATIYAGEKDKAGVARMRKMIKSQGKKTTPGWSW 447
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIF 515
IE+ +V +FV D + + +++
Sbjct: 448 IEIGEQVHKFVVDDKSHRYSVEVY 471
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/483 (36%), Positives = 284/483 (58%), Gaps = 40/483 (8%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQ 71
E+R + + + CE++ L+++H +++ L Q+ F++ K+I C + G + YA +F +
Sbjct: 51 EERVMSVFKQCESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMDYALRVFGK 110
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ P+ FL+N MIR A YK+M G ++ D FT F++K C L
Sbjct: 111 IENPDGFLWNTMIRGLGRTRQPEKAFEFYKRM---QVKGEVL--DNFTYSFLVKVCGQLG 165
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
LGKQIH +V K GL+ H N L+ +YG +F +DI A
Sbjct: 166 SDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYG----------MF-----KDIEA------ 204
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
A LF++MP + +V+W +I + G Y EA+++F +M G++PD+ +
Sbjct: 205 ----------ATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDAT 254
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
V L ACA LG L++G +H D L + N+LI+MY KCG + A ++F++M
Sbjct: 255 FVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMK 314
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP-PNDITFIGLLSACAHTGFWNEGL 370
R++VSW+T+I GLA HG +A+ LF +M K+ PN++TF+G+L AC+H G EG
Sbjct: 315 GRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGR 374
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
YFD M+RD++I+ I+HYG +VD+LGRAG +++A +I+ MP++ ++ +W +LL++CR
Sbjct: 375 RYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRV 434
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK-TPGC 489
+ NLE+A + LL LEP+ + +YVLL+N+YA G+W V R+RK + + ++K PG
Sbjct: 435 HGNLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGVQKPKPGN 494
Query: 490 SLI 492
S I
Sbjct: 495 SYI 497
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/506 (35%), Positives = 288/506 (56%), Gaps = 41/506 (8%)
Query: 15 DRFVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
D + +L C N + E +++H ++K +L T++I + L A +F +
Sbjct: 11 DGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDE 70
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++E NV + AMI Y+ A++L+ QMLR S P++FT V+ SC G
Sbjct: 71 MRERNVVSWTAMISGYSQRGFASEALHLFVQMLR-----SDTEPNEFTFATVLSSCTGFS 125
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
LG+QIH+H+ K ++H ++LLD+Y
Sbjct: 126 GFELGRQIHSHIFKRNYENHIFVGSSLLDMY----------------------------- 156
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
A+ G++ +AR +F+ +P +VS TA+ISGY +G EAL++F ++Q G+ + ++
Sbjct: 157 --AKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVT 214
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
S+L A + L +L+ G+ +H + + L V+ N+LI+MY KCG +N A ++F+ M
Sbjct: 215 YASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMP 274
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGL 370
R V+SW+ ++ G + HGK + + LF M + KV P+ +TF+ +LS C+H G ++GL
Sbjct: 275 VRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGL 334
Query: 371 MYFDSM-KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
FD M IE IEHYGC++DLLGRAGR+++A +I++MP +P A IWGSLL +CR
Sbjct: 335 EMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACR 394
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+SN I LL +EPE+ GNYV+LSN+YA GRWEDV +R+L+ K++ K PG
Sbjct: 395 VHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGR 454
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIF 515
S IE++ + F + D + P +++F
Sbjct: 455 SWIELDQTIHTFYASDRSHPRREEVF 480
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/499 (36%), Positives = 275/499 (55%), Gaps = 13/499 (2%)
Query: 44 QSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM 103
++ F+ T +I GDL A + + E +NAMI Y ++ L+ A+ L+++M
Sbjct: 221 RNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKM 280
Query: 104 LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS----ITENALL 159
+ D+ T VI +CA LGKQ+HA++ K L N L+
Sbjct: 281 RLLG-----VQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLI 335
Query: 160 DLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA 219
LY K ++ A K+F EM +DI+ WN L+SGY G+M++A+ F +MP +++WT
Sbjct: 336 TLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTV 395
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
MISG G +AL +F QM++ G EP++ + + AC+ LG+LE G +H H
Sbjct: 396 MISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLH--AQIVH 453
Query: 280 LLRRTVIC--NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
L + + NA+I MY +CG + A +F M D VSW+++I L HG KAI L
Sbjct: 454 LGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIEL 513
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
+ +M + + P+ TF+ +LSAC+H G EG YF+SM ++ I +HY ++DL
Sbjct: 514 YEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFC 573
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
RAG+ A N+I+ MP + A IW +LL+ CRT+ N+++ + A E L L P+ G YVL
Sbjct: 574 RAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVL 633
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWL 517
LSN+YA GRW DV+R RKL+R + +KK P CS EV N+V F+ D P + I+
Sbjct: 634 LSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNY 693
Query: 518 LELLALHQDRAKDVIDIMY 536
LE L L + + D Y
Sbjct: 694 LEKLNLEMKKIGYIPDTKY 712
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 134/530 (25%), Positives = 228/530 (43%), Gaps = 108/530 (20%)
Query: 8 LSIKELEDRFVPILQSC--ENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL 62
L ++ L +R+ L C +NL + +H ++ +V ++ID+ D
Sbjct: 5 LDVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDF 64
Query: 63 AYASLLFKQVKEPNVF---------------------------------LYNAMIRAYTN 89
YA LF ++ +P+V YNAMI Y++
Sbjct: 65 VYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSH 124
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG-KQIHAHVCKFGL 148
+ AI L++ M + PD FT V+ + + Q+H V KFG+
Sbjct: 125 MNDGHSAIELFRAM-----RWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGI 179
Query: 149 KSHSITENALLDLYGKC---------DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
+ NALL +Y KC + A K+F+EM R+ W LI+GY R G +
Sbjct: 180 EIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDL 239
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
AR + D M ++W AMISGY H G + +AL +FR+M+++G++ DE + SV+ AC
Sbjct: 240 TGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISAC 299
Query: 260 AQLGSLELGEWIHMYCDKNHL-----------------------------------LRRT 284
A G LG+ +H Y KN L ++
Sbjct: 300 ADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDI 359
Query: 285 VICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
+ N L+ Y+ G + +A F QM E+++++W+ +I GLA +G +A+ LF++M+
Sbjct: 360 ITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLD 419
Query: 345 KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG---------CLVDL 395
PND F G ++AC+ G +++ + +I H G ++ +
Sbjct: 420 GYEPNDYAFAGAITACSVLG----------ALENGRQLHAQIVHLGHDSTLSVGNAMITM 469
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
R G ++ A + MP D W S++++ + + A+ E +L
Sbjct: 470 YARCGIVEAARTMFLTMPF-VDPVSWNSMIAALGQHGHGVKAIELYEQML 518
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/468 (36%), Positives = 274/468 (58%), Gaps = 41/468 (8%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
FL+ +I++ G L A +F ++ + NV + MI AY+ L A+ MLR+
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
+ P+ FT V+++C GL +Q+H + K GL S +AL+D+Y
Sbjct: 61 G-----VRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVY---- 108
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+R G+++ A +FD+M +V W+++I+G+
Sbjct: 109 ---------------------------SRWGELENALRVFDEMVTGDLVVWSSIIAGFAQ 141
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
EAL +F++M+ G + ++ SVL AC L LELG +H++ K + ++
Sbjct: 142 NSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLIL 199
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
NAL++MY KCG + A+ +F +MVE+DV+SWST+I GLA +G + +A+ LF M+ L +
Sbjct: 200 NNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGI 259
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
PN +T +G+L AC+H G EGL YF SMK I+ EHYGC++DLLGRAGRL +A+
Sbjct: 260 KPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAV 319
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
++I EM +PDA W +LL++CR + N+++A+ A + +L L+P+D G YVLLSNIYA
Sbjct: 320 DLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQ 379
Query: 467 RWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
RW DV+ +R+ + ++ +KK PGCS IEV+ ++ F+ GD + P +++I
Sbjct: 380 RWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREI 427
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 181/358 (50%), Gaps = 49/358 (13%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ +L++C+ L L+++H I+K L F+ + +IDV + G+L A +F ++ +
Sbjct: 69 YSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGD 128
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +++++I + N A+ L+K+M R G L + TL V+++C GL LG
Sbjct: 129 LVVWSSIIAGFAQNSDGDEALRLFKRM---KRAG--FLAQQTTLTSVLRACTGLALLELG 183
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+Q+H HV K+ I NALLD+Y KC L +A+ VF M ++D+++W+ +I+G A+
Sbjct: 184 RQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQN 241
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G K EAL +F M+++GI+P+ ++IV VL
Sbjct: 242 GYSK-------------------------------EALKLFESMKVLGIKPNYVTIVGVL 270
Query: 257 PACAQLGSLELGEWIHMYCDKNHLL-----RRTVICNALIEMYIKCGCINQASQLFDQM- 310
AC+ G +E G ++ + L R C +I++ + G +++A L ++M
Sbjct: 271 FACSHAGLVEEG--LYYFHSMKELFGIDPGREHYGC--MIDLLGRAGRLSEAVDLINEME 326
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
E D V+W ++ H AIH ++ RL P + T++ L + A+T WN+
Sbjct: 327 CEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLD-PQDAGTYVLLSNIYANTQRWND 383
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 185/511 (36%), Positives = 293/511 (57%), Gaps = 46/511 (9%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMID---VCNSGGDLAYASLLFK 70
+ +L+SC + L K++H ++ + ++ + L TK+++ VCNS L A LF
Sbjct: 61 YASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNS---LRNAHHLFD 117
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + N+FL+N +IRAY N + AI+LY QML + PD FTLPFV+K+C+ L
Sbjct: 118 KIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYG-----LKPDNFTLPFVLKACSAL 172
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G+ IH V + G +RD+ L+
Sbjct: 173 STIGEGRVIHERVIRSGW-------------------------------ERDVFVGAALV 201
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
YA+ G + AR +FDK+ V W +M++ Y G E+L + +M G+ P E
Sbjct: 202 DMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEA 261
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++V+V+ + A + L G IH + ++ + ALI+MY KCG + A LF+++
Sbjct: 262 TLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERL 321
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
E+ VVSW+ +I G A HG A +A+ LF M + + P+ ITF+G L+AC+ +EG
Sbjct: 322 REKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGALAACSRGRLLDEGR 380
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
++ M RD I +EHY C+VDLLG G+LD+A ++I +M + PD+ +WG+LL+SC+T
Sbjct: 381 ALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKT 440
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ N+E+A +A+E L+ LEP+D+GNYV+L+N+YA+ G+WE V+R+R+L+ K +KK CS
Sbjct: 441 HGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACS 500
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
IEV N+V F+SGD + P I+ L+ L
Sbjct: 501 WIEVKNKVYAFLSGDVSHPNSGAIYAELKRL 531
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 292/501 (58%), Gaps = 15/501 (2%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+ K+IH + L++ +++ ++++ + GD YA LF + PN+F YN++I +
Sbjct: 3 QTKQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSIITS 62
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
YT N + ++ +ML + I P+ T ++K+C L S +Q+ K
Sbjct: 63 YTTNSQFHKLFFVFTKMLN-----TNIRPNSHTFTTLVKACVSL---SSLEQVFTLSMKL 114
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
G S +++++ + K + A +VF+E ++R++V W +L+SGY G + +AR +F
Sbjct: 115 GNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVF 174
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-----VGIEPDEISIVSVLPACAQ 261
DKMP S++AM+SGY G ++E + +FR+++ ++ + +VSVL AC
Sbjct: 175 DKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTM 234
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
+G+ E G+WIH Y ++N L + ALI+ Y+KCG + A ++F++M +DV +WS +
Sbjct: 235 VGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAM 294
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I GLA +G A+ LF +M+++ PN++TF+G+L+AC H + E F M ++
Sbjct: 295 ILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYN 354
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
I IEHYGC+VD+L R+G++ +AL I M ++PD IWGSLL+ C + + E+
Sbjct: 355 ITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVG 414
Query: 442 EHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEF 501
++L+ EP+ +G YVLL+N+YA G+WE VS +RKL++ + + G S IE++ + +F
Sbjct: 415 KYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKF 474
Query: 502 VSGDDTKPFLKDIFWLLELLA 522
+ D + ++I+ +L L
Sbjct: 475 FADDKCCLYSREIYDVLSHLG 495
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/507 (35%), Positives = 282/507 (55%), Gaps = 36/507 (7%)
Query: 28 IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAY 87
+E ++H +K L + + ++D+ G L A L+F++++ + +NA+I A+
Sbjct: 357 LEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAH 416
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG 147
N ++L+ MLR S + PD FT V+K+CAG + G +IH + K G
Sbjct: 417 EQNEEIVKTLSLFVSMLR-----STMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSG 471
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
+ +AL+D+YGKC L+EA K+ + ++ V+WN++ISG++ Q + A+ F
Sbjct: 472 MGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFS 531
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
QM +GI PD + +VL CA + ++EL
Sbjct: 532 -------------------------------QMLEMGIIPDNYTYATVLDVCANMATIEL 560
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
G+ IH K L I + L++MY KCG + + +F++ +RD V+WS +I A
Sbjct: 561 GKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAY 620
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
HG KAI+LF EMQ L V PN FI +L ACAH G+ ++GL YF M + ++ ++E
Sbjct: 621 HGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQME 680
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
HY C+VDLLGR+G++++AL +IE MP + D IW +LLS+C+ N+E+A A LL L
Sbjct: 681 HYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQL 740
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
+P+D+ YVLL+N+YA G W +V++MR ++++ +KK PGCS IEV +EV F+ GD
Sbjct: 741 DPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKA 800
Query: 508 KPFLKDIFWLLELLALHQDRAKDVIDI 534
P ++I+ LL A V DI
Sbjct: 801 HPRSEEIYEQTHLLVDEMKWAGYVPDI 827
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 153/301 (50%), Gaps = 3/301 (0%)
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
K T +++ C+ L + GKQ+H + G N LL Y K ++ A KVF+
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
M RD+++WN LI GYA +G M A+ LFD MP +VSW +++S Y H G +++++
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
F +M+ + I D + +L AC+ + LG +H + V +AL++MY K
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 297 CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
C ++ A ++F +M ER++V WS VI G + + + + LF +M ++ + + T+ +
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 357 LSACAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+CA + G ++ ++K D + I +D+ + R+ A + +P
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG--TATLDMYAKCERMFDAWKVFNTLPNP 303
Query: 416 P 416
P
Sbjct: 304 P 304
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 192/438 (43%), Gaps = 43/438 (9%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
R+ +L I F IL++C + + ++H ++ + ++D+ +
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
L A +F+++ E N+ ++A+I Y N + + L+K ML+ S + T
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVS-----QSTY 242
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
V +SCAGL LG Q+H H K SI A LD+Y KC+ + +A KVF
Sbjct: 243 ASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVF----- 297
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
+ +P S+ A+I GY +ALD+F+ +
Sbjct: 298 --------------------------NTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSL 331
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
Q + DEIS+ L AC+ + G +H K L + N +++MY KCG +
Sbjct: 332 QRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGAL 391
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+A +F++M RD VSW+ +I + + K + LF M R + P+D T+ ++ AC
Sbjct: 392 MEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKAC 451
Query: 361 AHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
A N G ++ +K ++ + LVD+ G+ G L +A I + K
Sbjct: 452 AGQQALNYGTEIHGRIIKSGMGLDWFVG--SALVDMYGKCGMLMEAEKIHARLEEKTTVS 509
Query: 420 IWGSLLSSCRTYSNLEIA 437
W S++S + E A
Sbjct: 510 -WNSIISGFSSQKQSENA 526
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 202/445 (45%), Gaps = 45/445 (10%)
Query: 14 EDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+ + + +SC L K ++H LK + + + T +D+ + A +F
Sbjct: 239 QSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFN 298
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ P YNA+I Y A+++++ + R+ + D+ +L + +C+ +
Sbjct: 299 TLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNN-----LGFDEISLSGALTACSVI 353
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G Q+H K GL + N +LD+YGKC L+EA +FEEM RD V+WN +I
Sbjct: 354 KRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAII 413
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+ + + ++ K LF M +T +EPD+
Sbjct: 414 AAHEQNEEIVKTLSLFVSMLRST-------------------------------MEPDDF 442
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ SV+ ACA +L G IH K+ + + +AL++MY KCG + +A ++ ++
Sbjct: 443 TYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARL 502
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG- 369
E+ VSW+++I G ++ ++ A F +M + + P++ T+ +L CA+ G
Sbjct: 503 EEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGK 562
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
++ +K H + I LVD+ + G + + + E+ P K D W +++ +
Sbjct: 563 QIHAQILKLQLHSDVYIA--STLVDMYSKCGNMQDSRLMFEKAP-KRDYVTWSAMICAYA 619
Query: 430 TYSNLEIAVIAME--HLLVLEPEDT 452
+ E A+ E LL ++P T
Sbjct: 620 YHGLGEKAINLFEEMQLLNVKPNHT 644
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 197/440 (44%), Gaps = 62/440 (14%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ILQ C NL L K++HTQ++ + ++ ++ + YA +F ++
Sbjct: 9 FSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMP 68
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDP------------------------R 108
+ +V +N +I Y G A +L+ M RD R
Sbjct: 69 QRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128
Query: 109 TGSLILP-DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
SL +P D T ++K+C+G+ LG Q+H + G ++ +T +AL+D+Y
Sbjct: 129 MRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY----- 183
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
++ ++ A +F +MP +V W+A+I+GY
Sbjct: 184 --------------------------SKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQN 217
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
+ E L +F+ M VG+ + + SV +CA L + +LG +H + K+ ++I
Sbjct: 218 DRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG 277
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
A ++MY KC + A ++F+ + S++ +I G A + KA+ +F +QR +
Sbjct: 278 TATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLG 337
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
++I+ G L+AC+ EG+ + + I ++D+ G+ G L +A
Sbjct: 338 FDEISLSGALTACSVIKRHLEGIQ-LHGLAVKCGLGFNICVANTILDMYGKCGALMEACL 396
Query: 408 IIEEMPMKPDAKIWGSLLSS 427
I EEM + DA W +++++
Sbjct: 397 IFEEME-RRDAVSWNAIIAA 415
>gi|357131180|ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Brachypodium distachyon]
Length = 474
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 273/430 (63%), Gaps = 7/430 (1%)
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
++ L+ QV + ++A+++AY++ A+NL++ R+ + D + F
Sbjct: 47 HSQLVAHQVFDRRPTPWHALLKAYSHGPFPQEALNLFRDAHRN------MADDTYAFMFS 100
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+++CAGL P G Q+H V + G + H+ +L++ Y C L++A F+EM +++
Sbjct: 101 LRACAGLAWPWTGAQLHGLVIRKGFEFHAYVHTSLINTYVVCGCLVDARMAFDEMPVKNV 160
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
V+WN +I+G+A G+++ AR+LF++MP +VSWT +I GYT EA+ + R+M
Sbjct: 161 VSWNVMITGFAGRGEIEYARLLFERMPSRNVVSWTGLIDGYTRSCHSVEAVALLRRMMAE 220
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
GI P EI++++V+PA + +G + +GE +H YC+KN L+ + N+LI++Y K G I +
Sbjct: 221 GISPTEITVLAVVPAISDIGRILMGETLHGYCEKNGLVLDIRVGNSLIDLYAKIGSIQSS 280
Query: 304 SQLFDQMV-ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
++F M+ R++VSW+++I G A HG + +A+ LF EM+R + PN +TF+ +L+AC+H
Sbjct: 281 LKVFHGMLNRRNLVSWTSIISGFAMHGLSTEAVELFAEMRRSGIRPNRVTFLSVLNACSH 340
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G +G+ +F SM +++I +I+H+GC++D+LGRAGRL +A +I +PM+ ++ +W
Sbjct: 341 GGLVEQGVEFFKSMVYEYNINPEIKHFGCIIDMLGRAGRLCEAEQVIGGLPMEVNSIVWR 400
Query: 423 SLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
+LL+ C Y +E+ AM+ +L E E G++V++SN+ + GR+ D R RKL+ ++
Sbjct: 401 TLLACCSKYGEVEMGKRAMKKILHTERESGGDFVVVSNMLTELGRFSDAERSRKLLDERN 460
Query: 483 MKKTPGCSLI 492
K PG +L+
Sbjct: 461 AVKVPGLALV 470
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 133/282 (47%), Gaps = 39/282 (13%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI G++ YA LLF+++ NV + +I YT + A+ L ++M+ +
Sbjct: 166 MITGFAGRGEIEYARLLFERMPSRNVVSWTGLIDGYTRSCHSVEAVALLRRMMAEG---- 221
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
I P + T+ V+ + + + +G+ +H + K GL N+L+DLY K + +
Sbjct: 222 -ISPTEITVLAVVPAISDIGRILMGETLHGYCEKNGLVLDIRVGNSLIDLYAKIGSIQSS 280
Query: 172 HKVFEEMTD-RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
KVF M + R++V+W ++ISG+A H G
Sbjct: 281 LKVFHGMLNRRNLVSWTSIISGFA------------------------------MH-GLS 309
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNA 289
EA+++F +M+ GI P+ ++ +SVL AC+ G +E G E+ + ++
Sbjct: 310 TEAVELFAEMRRSGIRPNRVTFLSVLNACSHGGLVEQGVEFFKSMVYEYNINPEIKHFGC 369
Query: 290 LIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGK 330
+I+M + G + +A Q+ + +E + + W T++ + +G+
Sbjct: 370 IIDMLGRAGRLCEAEQVIGGLPMEVNSIVWRTLLACCSKYGE 411
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 288/520 (55%), Gaps = 18/520 (3%)
Query: 18 VPILQSCENLIELKKIHTQILK----------YLLSQSNFLVTKMIDVCNSGGDLAYASL 67
+ +++ C+ + +L ++H + LL++ + +T +S L YA
Sbjct: 20 IKLIKQCKTISQLHQLHAYTITNTPLSFHSSPSLLTKFLYTLTTKAKSKSSTSLLHYAKS 79
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP-DKFTLPFVIKS 126
+F ++ P+ F YN +IR +T A++ + QM R L +P D + PF +K+
Sbjct: 80 IFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRR------LSVPLDSHSFPFTLKA 133
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
CA L + +H V KFG S N+L+ Y D +A+KVF+E RD+V++
Sbjct: 134 CAQLGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDMSNDAYKVFDESPQRDVVSY 193
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
N LI G+ + G + KAR LFD MP VSW +I+G EA+++F M + I
Sbjct: 194 NVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIELFDFMMDLEIR 253
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD +++VS L ACAQLG LE G+ IH Y ++N + T + L++ Y KCGC++ A ++
Sbjct: 254 PDNVALVSTLSACAQLGELEKGKKIHDYIERNAMKVDTFLSTGLVDFYAKCGCVDIALKI 313
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
FD ++++ +W+ ++ GLA HG + F M V P+ I+ +G+L C+H+G
Sbjct: 314 FDSSSDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIEAGVKPDGISILGVLVGCSHSGLV 373
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+E FD M+ + + + +HYGC+ DLLGRAG + + + +I++MP D +W LL
Sbjct: 374 DEARKLFDEMESVYGVPREPKHYGCMADLLGRAGLIKKVMEMIKDMPRGGDMSVWSGLLG 433
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS-KSMKK 485
CR + ++EIA A +HL+ L+P+D G Y +L+N+YA RWEDV +R+ + S + + K
Sbjct: 434 GCRIHGDVEIAEKAAKHLMELKPDDGGVYSILANVYANAERWEDVMNIRRSLSSNRVVTK 493
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQ 525
G SLI+++ EF++GD I+ +L + HQ
Sbjct: 494 IAGFSLIQLDGVAHEFIAGDSLHSESDKIYLVLNGIREHQ 533
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 275/476 (57%), Gaps = 39/476 (8%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E NV + ++I Y+ N G A+ Y QML+ S ++PD+FT +IK+C+ L
Sbjct: 3 ERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQ-----SGVMPDQFTFGSIIKACSSLGDI 57
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+Q+HAHV K +H I +NAL+ +Y K + +I+A VF M RD+++W ++I+G+
Sbjct: 58 GLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGF 117
Query: 194 ARLGQMKKARMLFDKMPYTT---IVSWTAMISGY-------------------------- 224
++LG +A F +M + +V+W A+I+G+
Sbjct: 118 SQLGYELEALCYFKEMLHQGRPDLVAWNAIIAGFAYGELRDAIFFFEEMRCNADLVSWNA 177
Query: 225 --THIGSYAEALDVFRQMQMVGI---EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
T + +A +VFR ++++ I PD I++ +VL A A+ S+E+G +H Y K
Sbjct: 178 ILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTG 237
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
L T + N LI++Y KCG + A ++FD M+ DVVSWS++I G A G +A+ LF
Sbjct: 238 LNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFK 297
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
M+RL V PN +TF+G+L+AC+H G EG + +M+++ I EH C+VDLL RA
Sbjct: 298 TMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARA 357
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLS 459
G L++A I +M PD +W +LL++C+T+ N+++ A E++L ++P ++ +VLL
Sbjct: 358 GCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLC 417
Query: 460 NIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
NIYA G WEDV+R+R L++ + ++K PG S IEV + + F D P I+
Sbjct: 418 NIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIY 473
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
MP +VSWT++I+GY+ G AL+ + QM G+ PD+ + S++ AC+ LG + LG
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+H + K+ + NALI MY K I A +F +M RD++SW ++I G +
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
G +A+ F EM + P+ + + +++ A+ G + + +F+ M+
Sbjct: 121 GYELEALCYFKEMLH-QGRPDLVAWNAIIAGFAY-GELRDAIFFFEEMR 167
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 7/164 (4%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
++H LK L+ + +ID+ G L A +F + P+V ++++I Y
Sbjct: 227 NQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQF 286
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK-FGLK 149
A+ L+K M R + P+ T V+ +C+ + G +++ + K FG+
Sbjct: 287 GYGEEALKLFKTMRRLD-----VKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIA 341
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLISG 192
+ ++DL + L EA +M D DIV W L++
Sbjct: 342 PTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAA 385
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 280/515 (54%), Gaps = 39/515 (7%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L++C + L ++IH Q +K S+F+ + + N G L Y LF+++
Sbjct: 220 FAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMS 279
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V + +I A+ + +M S + P+++T VI CA L
Sbjct: 280 MRDVVSWTTIITTLVQMGQEECAVQAFIRMRE-----SDVSPNEYTFAAVISGCANLARI 334
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+HA + GL + EN+++ +Y KC +L + +F EMT RDIV+W+ +I+GY
Sbjct: 335 EWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGY 394
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
++ G + +EA ++ M+M G +P E ++
Sbjct: 395 SQGGHV-------------------------------SEAFELLSWMRMEGPKPTEFALA 423
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL AC + LE G+ +H Y L ++ +ALI MY KCG I +AS++FD
Sbjct: 424 SVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEND 483
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+ +I G A HG + + I LF ++ R+ + P+ +TFIG+LSAC+H G + G YF
Sbjct: 484 DIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYF 543
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
++M + + I EHYGC++DLL RAGRL A ++IE MP D +W +LL +CR + +
Sbjct: 544 NAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGD 603
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E E +L LEP G ++ L+NIYA G+W + + +RKL++SK + K PG S I+
Sbjct: 604 VERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIK 663
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
V + V FV+GD + P +DI+ +L+LLA + A
Sbjct: 664 VKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELA 698
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 213/516 (41%), Gaps = 86/516 (16%)
Query: 5 IGALSIKELEDRF--VPILQS--CENLIELKKIHTQILK--YLLSQSNFLVT-KMIDVCN 57
+ ALSI+ L R P + S C +L L++ + + + + +SQ++ + K +
Sbjct: 1 MAALSIRALGRRLFTAPAVASTECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELV 60
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
G L A +F ++ + + + +I Y N + A+ L+K M R S + D
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNM----RVESGLRIDP 116
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
F L K+C + G+ +H + K GL + +ALLD+Y K ++ E +V
Sbjct: 117 FILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRV--- 173
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
F +MP +VSWTA+I+G G EAL F
Sbjct: 174 ----------------------------FHEMPMRNVVSWTAIITGLVRAGYNKEALVYF 205
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
+M +E D + L ACA G+L G IH K + + N L MY KC
Sbjct: 206 SEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKC 265
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G + LF++M RDVVSW+T+I L G+ A+ F M+ V PN+ TF ++
Sbjct: 266 GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVI 325
Query: 358 SACAHTGF--WNEGL---------------------MY------------FDSMKRDHHI 382
S CA+ W E L MY F M R
Sbjct: 326 SGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTR---- 381
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM---KPDAKIWGSLLSSCRTYSNLEIAVI 439
I + ++ + G + +A ++ M M KP S+LS+C + LE
Sbjct: 382 -RDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440
Query: 440 AMEHLLVLEPEDTGNYV-LLSNIYAKHGRWEDVSRM 474
++L + E T + L N+Y K G E+ SR+
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRI 476
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 161/362 (44%), Gaps = 44/362 (12%)
Query: 14 EDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F ++ C NL ++ ++H IL L+ S + ++ + G L +S++F
Sbjct: 318 EYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAG 129
++ ++ ++ +I Y+ A L M + P+ P +F L V+ +C
Sbjct: 378 EMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPK------PTEFALASVLSACGN 431
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
+ GKQ+HA+V GL+ ++ +AL+++Y KC + EA ++F+ + DIV+W +
Sbjct: 432 MAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAM 491
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
I+GYA G ++ LF+K+P VG+ PD
Sbjct: 492 INGYAEHGYSREVIDLFEKIP-------------------------------RVGLRPDS 520
Query: 250 ISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++ + VL AC+ G ++LG + + K + +I++ + G ++ A + +
Sbjct: 521 VTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIE 580
Query: 309 QM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
M RD V WST++ HG + + +L+ P T I L + A G W
Sbjct: 581 AMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLE-PNCAGTHITLANIYASKGKWR 639
Query: 368 EG 369
E
Sbjct: 640 EA 641
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 172/464 (37%), Positives = 280/464 (60%), Gaps = 12/464 (2%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L+ A LL Q +V + ++I AY+ A++ +K ML + I PD T
Sbjct: 126 GMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEG-----IAPDDVT 180
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN---ALLDLYGKCDELIEAHKVFE 176
+ V+ +C+ L LG +H V + G+ S++EN AL+D+Y KC + A +VF+
Sbjct: 181 VIGVLSACSQLKDLELGCSLHLLVKEKGM---SMSENLVVALIDMYAKCGDFGHAREVFD 237
Query: 177 EM-TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
+ R +WN +I GY + G + AR LFD+M I+++ +MI+GY H G EAL
Sbjct: 238 AVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALL 297
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
+F M+ + D ++VS+L ACA LG+L G +H + + I AL++MY+
Sbjct: 298 LFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYM 357
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
KCG +N+A+ +F +M +RDV +W+ +I GLA +G + F++M+ PN +++I
Sbjct: 358 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIA 417
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+L+AC+H+ NEG +YFD M+ ++I +IEHYGC++DLLGR+G LD+A+++++ MPM+
Sbjct: 418 VLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQ 477
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
P++ IW S+LS+CR + +++A A EHLL +EP++ YV L NI +WED S++R
Sbjct: 478 PNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIR 537
Query: 476 KLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
L+ + +KKT G S + V +V +FV D + P + +I +LE
Sbjct: 538 MLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLE 581
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 195/393 (49%), Gaps = 53/393 (13%)
Query: 76 NVFLYN----AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--- 128
+ FL++ A RA T++ + L+++M R + + PD FT F+ K +
Sbjct: 4 STFLFDTALRACFRAGTSSGDPDIPFVLFRRMRR-----AAVRPDGFTFHFLFKCSSSSR 58
Query: 129 --GLLCPSLGKQIHAHVCKFGLKSHS-ITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
LLC L HA + L S + N+L+ +Y + + + F+E+ +D V+
Sbjct: 59 PRALLCTML----HAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVS 114
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W +ISG A++G + AR+L + P ++SWT++I+ Y+ EA+D F+ M GI
Sbjct: 115 WTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGI 174
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG------- 298
PD+++++ VL AC+QL LELG +H+ + + + ALI+MY KCG
Sbjct: 175 APDDVTVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHARE 234
Query: 299 ---------------------C----INQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
C ++ A LFDQM RD+++++++I G + G+ +
Sbjct: 235 VFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLRE 294
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
A+ LF M+R + ++ T + LLSACA G +G ++ +E I L+
Sbjct: 295 ALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIEL-RLVETDIYIGTALL 353
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
D+ + GR+++A + + M K D W ++++
Sbjct: 354 DMYMKCGRVNEATIVFQRMG-KRDVHAWTAMIA 385
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 224/487 (45%), Gaps = 55/487 (11%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSN-FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
Q+ E L + +++H +LK SN FL ++D+ ++ GD + +V +
Sbjct: 844 QNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISW 903
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS------ 134
N+++ Y + A+ KQML + S ++S LL S
Sbjct: 904 NSILSMYADRGHMKEAVYYLKQMLWHGKMPS------------VRSFVSLLALSGKTGDW 951
Query: 135 -LGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
LG QIH V K G S+ + L+D+YGKC + +F E+ + N+LI+
Sbjct: 952 QLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLIT- 1010
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+ LG +FD AL++ M + G+ PD+++
Sbjct: 1011 -SSLGCN-----MFDA------------------------ALEILHCMIVEGVTPDDVTF 1040
Query: 253 VSVLPACAQLGSLELG--EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ + A + S L + +H K +C++LI Y G ++ + +F+ +
Sbjct: 1041 SATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGL 1100
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
++ +V+ ++ +I A +G +A+ LF +M + P+++TF+ ++ C G + EG
Sbjct: 1101 LDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGR 1160
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+ + M+ ++ H+ C+V+LL R G + +A+ ++E+ P++ K W SLL SC+
Sbjct: 1161 LVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKA 1220
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ + A L+ + +D + +SN + G E R++++ K +KK+ G S
Sbjct: 1221 HGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKS-GHS 1279
Query: 491 LIEVNNE 497
LIEV++
Sbjct: 1280 LIEVSHR 1286
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 166/392 (42%), Gaps = 80/392 (20%)
Query: 18 VPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV-- 72
+ +L +C L +L+ +H + + +S S LV +ID+ GD +A +F V
Sbjct: 182 IGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGR 241
Query: 73 -KEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILP--------------- 115
+ P +NA+I Y + +A +L+ QM +RD T + ++
Sbjct: 242 GRRPQS--WNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLF 299
Query: 116 ----------DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
D FT+ ++ +CA L G+ +HA + +++ ALLD+Y KC
Sbjct: 300 MNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKC 359
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
+ EA VF+ M RD+ AW TAMI+G
Sbjct: 360 GRVNEATIVFQRMGKRDVHAW-------------------------------TAMIAGLA 388
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL---- 281
G L+ F QM+ G +P+ +S ++VL AC+ L G +Y D+ +L
Sbjct: 389 FNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGR---LYFDEMRILYNIH 445
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
+ +I++ + G +++A L M ++ + V W++++ + HK I L
Sbjct: 446 PQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSAC----RVHKRIDLAQC 501
Query: 341 MQR--LKVPPN-DITFIGLLSACAHTGFWNEG 369
LK+ P+ D ++ L + C + W +
Sbjct: 502 AAEHLLKIEPDEDAVYVQLYNICIDSRKWEDA 533
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 107/268 (39%), Gaps = 17/268 (6%)
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
M + S MI+G+ G A V+R M GI + ++L C+ +L+L
Sbjct: 695 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQL- 753
Query: 269 EWIHMYCDKNHLLRRTVICN-----ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
+L + CN AL+ Y+ + A LF ++ ++ + V+
Sbjct: 754 --------HGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLR 805
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW-NEGLMYFDSMKRDHHI 382
GL N + I F +M+R + N +++ + C G W +G + + I
Sbjct: 806 GLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWI 865
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
I LVDL G + + ++ + D W S+LS +++ AV ++
Sbjct: 866 PSNIFLSNSLVDLYSAIGDSVDTVKALNDI-LSEDVISWNSILSMYADRGHMKEAVYYLK 924
Query: 443 HLLVL-EPEDTGNYVLLSNIYAKHGRWE 469
+L + ++V L + K G W+
Sbjct: 925 QMLWHGKMPSVRSFVSLLALSGKTGDWQ 952
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 286/523 (54%), Gaps = 38/523 (7%)
Query: 8 LSIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
L + F ++SC L +L + H Q + F+ + +ID+ + G L
Sbjct: 1136 LGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKD 1195
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDP---RTGSLILPDKFTLP 121
A LF ++ NV + +MI Y N A+ L+K L + G+ + D +
Sbjct: 1196 ARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMV 1255
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
V+ +C+ + + + +H V K G N L+D Y KC + + + KVF+ M ++
Sbjct: 1256 SVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK 1315
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM- 240
D ++WN++I+ YA+ G +SG EAL+VF M
Sbjct: 1316 DDISWNSMIAVYAQSG-----------------------LSG--------EALEVFHGMV 1344
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ VG+ + +++ +VL ACA G+L G+ IH K L + ++I+MY KCG +
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 1404
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A + FD+M E++V SW+ ++ G HG+A +A+ +F++M R V PN ITF+ +L+AC
Sbjct: 1405 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 1464
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
+H G EG +F++MK + IE IEHYGC+VDL GRAG L++A N+I+ M MKPD +
Sbjct: 1465 SHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV 1524
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
WGSLL +CR + N+++ IA + L L+P++ G YVLLSN+YA GRW DV RMR L+++
Sbjct: 1525 WGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKN 1584
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
+ + K PG SL+E+ V F+ GD P + I+ LE L L
Sbjct: 1585 RQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTL 1627
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 234/393 (59%), Gaps = 5/393 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+LQ+C+N L++IH +I++ LS L K+I + ++ G +AYA LLF Q++ P F
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +IRA T N L A+ LYK M+ I DKFT PFVIK+C L LGK +
Sbjct: 93 WNLIIRANTINGLSEQALMLYKNMVCQG-----IAADKFTFPFVIKACTNFLSIDLGKVV 147
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H + K+G +N L+D Y KC A KVFE+M R++V+W +ISG G +
Sbjct: 148 HGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDL 207
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
++AR +FD++P +VSWTAMI+GY EAL++F++MQ I P+E ++VS++ AC
Sbjct: 208 QEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKAC 267
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
++G L LG IH Y KN + + ALI+MY KCG I A ++F+ M + + +W+
Sbjct: 268 TEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWN 327
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++I L HG +A++LF EM+R+ V P+ ITFIG+L AC H EG YF M +
Sbjct: 328 SMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQH 387
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
+ I EHY C+ +L R+ LD+A +E+
Sbjct: 388 YGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 33/286 (11%)
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
K+ D + LI Y+ G++ A +LF ++ +W +I T G +
Sbjct: 49 KIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQ 108
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
AL +++ M GI D+ + V+ AC S++LG+ +H K + N LI+
Sbjct: 109 ALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLID 168
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG----------------------- 329
Y KCG A ++F++M R+VVSW+TVI GL + G
Sbjct: 169 FYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAM 228
Query: 330 --------KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
+ +A+ LF MQ + PN+ T + L+ AC G G D ++
Sbjct: 229 INGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC- 287
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
IE + L+D+ + G + A+ + E MP K W S+++S
Sbjct: 288 IEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITS 332
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI 271
+ + SW ++I+ G EAL F ++ +G+ P S + +C+ L L G
Sbjct: 1105 SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMS 1164
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H + +ALI+MY KCG + A LFD++ R+VVSW+++I G + +A
Sbjct: 1165 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 1224
Query: 332 HKAIHLFHEMQRLK--------VPPNDITFIGLLSACAH 362
A+ LF + + VP + + + +LSAC+
Sbjct: 1225 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 1263
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 284/514 (55%), Gaps = 38/514 (7%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++SC L +L + H Q + F+ + +ID+ + G L A LF ++
Sbjct: 2018 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 2077
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDP---RTGSLILPDKFTLPFVIKSCAGL 130
NV + +MI Y N A+ L+K L + G+ + D + V+ +C+ +
Sbjct: 2078 LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 2137
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
+ + +H V K G N L+D Y KC + + + KVF+ M ++D ++WN++I
Sbjct: 2138 SGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMI 2197
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDE 249
+ YA+ G +SG EAL+VF M + VG+ +
Sbjct: 2198 AVYAQSG-----------------------LSG--------EALEVFHGMVRHVGVRYNA 2226
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+++ +VL ACA G+L G+ IH K L + ++I+MY KCG + A + FD+
Sbjct: 2227 VTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDR 2286
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M E++V SW+ ++ G HG+A +A+ +F++M R V PN ITF+ +L+AC+H G EG
Sbjct: 2287 MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG 2346
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
+F++MK + IE IEHYGC+VDL GRAG L++A N+I+ M MKPD +WGSLL +CR
Sbjct: 2347 WHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACR 2406
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ N+++ IA + L L+P++ G YVLLSN+YA GRW DV RMR L++++ + K PG
Sbjct: 2407 IHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGF 2466
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
SL+E+ V F+ GD P + I+ LE L L
Sbjct: 2467 SLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTL 2500
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 234/393 (59%), Gaps = 5/393 (1%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+LQ+C+N L++IH +I++ LS L K+I + ++ G +AYA LLF Q++ P F
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +IRA T N L A+ LYK M+ I DKFT PFVIK+C L LGK +
Sbjct: 93 WNLIIRANTINGLSEQALMLYKNMV-----CQGIAADKFTFPFVIKACTNFLSIDLGKVV 147
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H + K+G +N L+D Y KC A KVFE+M R++V+W +ISG G +
Sbjct: 148 HGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDL 207
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
++AR +FD++P +VSWTAMI+GY EAL++F++MQ I P+E ++VS++ AC
Sbjct: 208 QEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKAC 267
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
++G L LG IH Y KN + + ALI+MY KCG I A ++F+ M + + +W+
Sbjct: 268 TEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWN 327
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++I L HG +A++LF EM+R+ V P+ ITFIG+L AC H EG YF M +
Sbjct: 328 SMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQH 387
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
+ I EHY C+ +L R+ LD+A +E+
Sbjct: 388 YGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 33/286 (11%)
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
K+ D + LI Y+ G++ A +LF ++ +W +I T G +
Sbjct: 49 KIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQ 108
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
AL +++ M GI D+ + V+ AC S++LG+ +H K + N LI+
Sbjct: 109 ALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLID 168
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG----------------------- 329
Y KCG A ++F++M R+VVSW+TVI GL + G
Sbjct: 169 FYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAM 228
Query: 330 --------KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
+ +A+ LF MQ + PN+ T + L+ AC G G D ++
Sbjct: 229 INGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC- 287
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
IE + L+D+ + G + A+ + E MP K W S+++S
Sbjct: 288 IEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITS 332
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 182 DIVAWNNLISGY--ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D + +N+++ G R A + + + + SW ++I+ G EAL F
Sbjct: 1946 DGITYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSS 2005
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
++ +G+ P S + +C+ L L G H + +ALI+MY KCG
Sbjct: 2006 LRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQ 2065
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK--------VPPNDI 351
+ A LFD++ R+VVSW+++I G + +A A+ LF + + VP + +
Sbjct: 2066 LKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSV 2125
Query: 352 TFIGLLSACAH 362
+ +LSAC+
Sbjct: 2126 VMVSVLSACSR 2136
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 281/502 (55%), Gaps = 41/502 (8%)
Query: 17 FVPILQSCENLIELKK---IHTQIL-KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
+ +L+ C L ++++ +H ++ + L L ++++ G L A +F ++
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
++ + A+I ++ N+ A+ L+ QMLR + P+ FTL ++K+
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR-----LGLQPNHFTLSSLLKASGSEHG 204
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
G Q+HA K+G +S +AL+D+Y +C
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARC--------------------------- 237
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
G M A++ FD MP + VSW A+ISG+ G AL + +MQ +P +
Sbjct: 238 ----GHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTY 293
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
SV ACA +G+LE G+W+H + K+ L I N L++MY K G I+ A ++FD++V+
Sbjct: 294 SSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVK 353
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
DVVSW+T++ G A HG + + F +M R+ + PN+I+F+ +L+AC+H+G +EGL Y
Sbjct: 354 PDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYY 413
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F+ MK+ + +E + HY VDLLGR G LD+A I EMP++P A +WG+LL +CR +
Sbjct: 414 FELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHK 472
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
N+E+ V A E L+P D+G +LLSNIYA GRW DV+++RK+++ +KK P CS +
Sbjct: 473 NMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWV 532
Query: 493 EVNNEVQEFVSGDDTKPFLKDI 514
E+ N V FV+ D+T P +K+I
Sbjct: 533 EIENAVHLFVANDETHPQIKEI 554
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 43/326 (13%)
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH-VCKFGLKSHSITENALLDLYGKCD 166
+ GSL+ PD ++K C L G+ +HAH V L +H + +N ++++Y KC
Sbjct: 79 QRGSLV-PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
L +A ++F+EM +D+V W LI+G++ Q + R
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFS---QNNRPR----------------------- 171
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
+AL +F QM +G++P+ ++ S+L A L+ G +H +C K +
Sbjct: 172 -----DALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYV 226
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
+AL++MY +CG ++ A FD M + VSW+ +I G A G+ A+HL +MQR
Sbjct: 227 GSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNF 286
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG----CLVDLLGRAGRL 402
P T+ + SACA G +G H I+ ++ L+D+ +AG +
Sbjct: 287 QPTHFTYSSVFSACASIGALEQG-----KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSI 341
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSC 428
D A + + + +KPD W ++L+ C
Sbjct: 342 DDAKRVFDRL-VKPDVVSWNTMLTGC 366
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL-RRTVI 286
G+ ALD+ ++ +V PD +L C +LG +E G +H + +H L V+
Sbjct: 69 GTGLYALDLIQRGSLV---PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVL 125
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
N ++ MY KCGC++ A ++FD+M +D+V+W+ +I G + + + A+ LF +M RL +
Sbjct: 126 QNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGL 185
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
PN T LL A + G + + + + LVD+ R G +D A
Sbjct: 186 QPNHFTLSSLLKASGSEHGLDPGTQ-LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQ 244
Query: 407 NIIEEMPMKPDAKIWGSLLS 426
+ MP K + W +L+S
Sbjct: 245 LAFDGMPTKSEVS-WNALIS 263
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 283/471 (60%), Gaps = 6/471 (1%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I G L LL Q +V + ++I AY+ + A+ +K ML
Sbjct: 177 TMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHG-- 234
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I PD+ T+ V+ +CA L LG+ +H V + G+ + AL+D+Y KC +
Sbjct: 235 ---IAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFG 291
Query: 170 EAHKVFEEM-TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A +VF+ + +WN +I GY + G + AR LFD+M I+++ +M++GY H G
Sbjct: 292 HAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSG 351
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
EAL +F M+ + D ++V++L ACA LG+L+ G +H ++ + +
Sbjct: 352 QLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGT 411
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY+KCG +++A+ +F +M +RDV +W+ +I GLA +G A+ F++M+ P
Sbjct: 412 ALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQP 471
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N +++I +L+AC+H+ NEG +YFD M+ ++I +IEHYGC++DLLGR+G LD+A+++
Sbjct: 472 NSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDL 531
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
++ MP++P+A IW S+LS+CR + ++++A A EHLL LEP++ G YV L NIY +W
Sbjct: 532 VKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQW 591
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
E+ S++R L+ + +KKT G S I V +V +FV D + P + +I +LE
Sbjct: 592 ENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLE 642
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 202/405 (49%), Gaps = 51/405 (12%)
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYT----NNHLYGLAINLYKQMLRDPRTGSLILPDK 117
L YA LF ++ P+ FL++ +RA + + H L L+++M R + + PD
Sbjct: 53 LRYALHLFDRMP-PSTFLFDTALRACSRAGSDPHRPFL---LFRRMRR-----AGVRPDG 103
Query: 118 FTLPFVIKSCAGLLCPS---LGKQIHAHVCKFGLKSHS-ITENALLDLYGKCDELIEAHK 173
FT F+ K + P L +HA + L S + N+L+ +Y + +A +
Sbjct: 104 FTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARR 163
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
F+E+ +D VAW LISG A++G + ++L + P ++SWT++I+ Y+ EA
Sbjct: 164 AFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREA 223
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
+ F+ M GI PDE+++++VL ACA+L LELG +H+ ++ + + ALI+M
Sbjct: 224 VGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDM 283
Query: 294 YIKCGCINQASQ--------------------------------LFDQMVERDVVSWSTV 321
Y KCG A Q LFD+M RD+++++++
Sbjct: 284 YAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSM 343
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
+ G + G+ +A+ LF M+R + ++ T + LL+ACA G +G +++
Sbjct: 344 MTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQ-RL 402
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+E I L+D+ + GR+D+A + + M K D W ++++
Sbjct: 403 VEADIYLGTALLDMYMKCGRVDEATIVFQRMG-KRDVHTWTAMIA 446
>gi|224141025|ref|XP_002323875.1| predicted protein [Populus trichocarpa]
gi|222866877|gb|EEF04008.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/445 (36%), Positives = 264/445 (59%), Gaps = 16/445 (3%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQVKEPNVFL 79
++C ++ LK+IH L L + ++ KM+ + GDLAYA LF Q+ PN F
Sbjct: 3 EACNSMSRLKQIHAHSLLAGLHDHSIILAKMLRFAAVSPSGDLAYAQRLFDQLPHPNTFF 62
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC------P 133
YN +IR Y + + +++L QM ++ + PD+FT F+IK+ + + P
Sbjct: 63 YNTLIRGYAKSSIPSYSLHLVNQMRQNG-----VDPDEFTFNFLIKARSRVRVNINRNLP 117
Query: 134 SLGK--QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
+ + +IH V K G SH NAL+ LY + A +VF+E D+V+W+ L+
Sbjct: 118 LVVECDEIHGAVLKLGFSSHLFVRNALIHLYAARGNPVVAWRVFDETVGVDVVSWSGLVL 177
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
+ R G++++AR +FD+MP +VSWT M+S Y+ EAL+++ M G+ PDE++
Sbjct: 178 AHVRAGELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREALELYVTMLDKGVRPDEVT 237
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VSV+ AC LG L++G +H Y D+N +CNALI+MY KCGC+++A Q+F+ M
Sbjct: 238 LVSVISACTNLGDLQMGYSVHSYIDENGFRWMVSLCNALIDMYAKCGCMDRAWQVFNSMS 297
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+ +V+W+++I AN+ A LF M V P+ +TF+ +L+A AH G +EG
Sbjct: 298 RKSLVTWNSMISACANNRNPEDAFGLFSRMFNYGVAPDGVTFLAVLTAYAHVGLVDEGYR 357
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
F+SM+RDH IE +IEHYGC+V++LG+AG L++A +I MP+ + +WG LL++CR +
Sbjct: 358 LFESMQRDHGIEARIEHYGCVVNMLGQAGWLEEAFELITSMPLPSNDVVWGVLLAACRKH 417
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYV 456
++ + ++ LL L+ D G Y
Sbjct: 418 GDVYMGERVVKKLLELKL-DGGYYT 441
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 279/508 (54%), Gaps = 41/508 (8%)
Query: 18 VPILQSCENLIEL---KKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V + +C N+ L K +H+ +K L + ++D+ + GDL A +F+++
Sbjct: 356 VNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD 415
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E V + +MI Y L AI L+ +M ++PD + + ++ +CA
Sbjct: 416 EKTVVSWTSMITGYVREGLSDGAIKLFDEM-----KSRGVVPDVYAVTSILNACAINGNL 470
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK +H ++ + L+++S NAL D+Y KC
Sbjct: 471 KSGKIVHDYIRENNLETNSFVSNALTDMYAKC---------------------------- 502
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G MK A +F M ++SW MI GYT EAL +F +MQ +PD ++
Sbjct: 503 ---GSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVA 558
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+LPACA L +L+ G IH Y +N + NA+++MY+KCG + A LFD + +
Sbjct: 559 CILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNK 618
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+ +I G HG +AI+ F++M+ + P++++FI +L AC+H+G +EG F
Sbjct: 619 DLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIF 678
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ MK++ IE +EHY C+VDLL R G L +A I+ MP+KPDA IWG+LL CR + +
Sbjct: 679 NIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHD 738
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+++A E + LEPE+TG YVLL+NIYA+ +WE+V ++RK I + +KK PGCS IE
Sbjct: 739 VKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIE 798
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+ ++ FV+GD +KP K I LL+ L
Sbjct: 799 IKGKINIFVAGDCSKPQAKKIELLLKRL 826
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 213/413 (51%), Gaps = 42/413 (10%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ ILQ C +++ + +++ + I + L K++ + GDL ++F ++
Sbjct: 153 YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +FL+N MI Y+ + YG +INL+KQML I P+ +T ++K A +
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELG-----IKPNSYTFSSILKCFAAVARV 267
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+H +CK G S++ N+L+ Y ++ A K+F+E+TDRD+++WN++ISGY
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G L D+ +++F +M + G++ D ++V
Sbjct: 328 VKNG-------LDDR------------------------GIEIFIKMLVFGVDIDLATMV 356
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVE 312
+V ACA +G+L LG+ +H Y K L R V N L++MY KCG +N A ++F++M E
Sbjct: 357 NVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE 416
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+ VVSW+++I G G + AI LF EM+ V P+ +L+ACA G G +
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIV 476
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
D + R++++E L D+ + G + A ++ M K D W +++
Sbjct: 477 HDYI-RENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMI 527
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 152/328 (46%), Gaps = 41/328 (12%)
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L+ Y + G +K+ RM+FDK+ + I W MIS Y+ G+Y E++++F+QM +GI+P+
Sbjct: 191 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPN 250
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+ S+L A + +E G +H K + N+LI Y + A +LFD
Sbjct: 251 SYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFD 310
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
++ +RDV+SW+++I G +G + I +F +M V + T + + ACA+ G
Sbjct: 311 ELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLL 370
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK------------- 415
G + + ++ ++ L+D+ + G L+ A+ + E M K
Sbjct: 371 GKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYV 430
Query: 416 ---------------------PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGN 454
PD S+L++C NL+ I +++ E T +
Sbjct: 431 REGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLE-TNS 489
Query: 455 YV--LLSNIYAKHGRWEDV----SRMRK 476
+V L+++YAK G +D S M+K
Sbjct: 490 FVSNALTDMYAKCGSMKDAHDVFSHMKK 517
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 186/563 (33%), Positives = 285/563 (50%), Gaps = 75/563 (13%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
LK++H ++ + L FLV ++ Y+ LLF + PN+FLYN +I + N
Sbjct: 29 LKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVN 88
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
NHL+ ++L+ + R L L FT P V+K+C LG +H+ V K G
Sbjct: 89 NHLFHETLDLFLSI----RKHGLNL-HGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFN 143
Query: 150 ---------------------SHSITE----------NALLDLYGKCDELIEAHKVFEEM 178
+H + E AL Y + EA +F++M
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKM 203
Query: 179 T----------------------DRDIVAW-----------------NNLISGYARLGQM 199
D D W L++ YA+ G+M
Sbjct: 204 VEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKM 263
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
+KAR +FD M IV+W+ MI GY E ++ F QM ++PD+ SIV L +C
Sbjct: 264 EKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSC 323
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A LG+L+LGEW D++ L + NALI+MY KCG + + ++F +M E+D+V +
Sbjct: 324 ASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMN 383
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
I GLA +G + +F + ++L + P+ TF+GLL C H G +GL +F+++
Sbjct: 384 AAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCV 443
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
+ ++ +EHYGC+VDL GRAG LD A +I +MPM+P+A +WG+LLS CR + ++A
Sbjct: 444 YALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET 503
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
++ L+ LEP + GNYV LSNIY+ GRW++ + +R ++ K MKK PG S IE+ V
Sbjct: 504 VLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVH 563
Query: 500 EFVSGDDTKPFLKDIFWLLELLA 522
EF++ D + P I+ LE L
Sbjct: 564 EFLADDKSHPLSDKIYAKLEDLG 586
>gi|293332303|ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea mays]
gi|238007354|gb|ACR34712.1| unknown [Zea mays]
Length = 464
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 176/461 (38%), Positives = 272/461 (59%), Gaps = 19/461 (4%)
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC---- 127
+ +P + AM RA+ + A+ +++ M+ D +LPD L + +C
Sbjct: 1 MPDPGLVSRTAMARAHAASGQAAQALAVFRDMIADG-----VLPDNVALAVALAACHTTA 55
Query: 128 ----AGLLCPSL-GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
AG+ GK +HA + G+ L+ +YG+ EL + ++F+ M R
Sbjct: 56 SLPAAGMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVRS 115
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-- 240
V+WN ++ Y R + A LF MP +VSW MI+GY+ +G + EAL++ RQM
Sbjct: 116 TVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMIS 175
Query: 241 -QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
+ P+ ++ +VL ACA G LE G W+H + D+N + + +LI+MY+KCG
Sbjct: 176 PSSCPVYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGS 235
Query: 300 INQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I +A Q+F++ E RD+ SW+T+I GLA HG+A A+ +F MQ + P+D+T +G+L+
Sbjct: 236 IEKALQVFEKAPEARDLYSWTTMICGLAMHGRAADALKMFGMMQDNGIHPDDVTLVGVLN 295
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
ACAH G +EGL +F S+++ + I KIEHYGC++DLLGR GRL +A NII M MKP+A
Sbjct: 296 ACAHCGLVDEGLRHFYSLEK-YAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNA 354
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
IWG+ L++C+ +SN+E+ IA L L+P D V+LS++YAK W ++R R+ +
Sbjct: 355 VIWGAFLNACKVHSNVELGEIAAAELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERREM 414
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
+ +KKTPGCS IE++ EV EFV+G P +I +LE
Sbjct: 415 NNLQIKKTPGCSSIELDGEVHEFVAGGFQHPQHGEICTVLE 455
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 173/462 (37%), Positives = 263/462 (56%), Gaps = 25/462 (5%)
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A LF ++ NV +N MI Y N A+ L+++M P++ + +
Sbjct: 149 AEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKM-----------PERNVVSWNT 197
Query: 125 KSCAGLLCPSL--GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
C + +++ + + + S + LLD EA +FE M +RD
Sbjct: 198 VMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLD---------EALDLFERMPERD 248
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF-RQMQ 241
+ +WN +I+G + G +++AR LF++MP ++SWT MI+G G EAL +F R +
Sbjct: 249 LPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLS 308
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
G +P++ + VSVL AC+ L L G+ +H K T + +ALI MY KCG +
Sbjct: 309 TNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELG 368
Query: 302 QASQLFDQMV--ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
A ++FD + +RD+VSW+ +I A+HG +AI+ F EM++ P+D+T++GLLSA
Sbjct: 369 TARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSA 428
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H G EGL YFD + +D I + +HY CLVDL GRAGRL +A IE + KP A+
Sbjct: 429 CSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSAR 488
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
+WG+LL+ C ++N++I A + LL +EPE+ G Y+LLSNIYA G+W + +R+R ++
Sbjct: 489 VWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMK 548
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
K +KK PGCS IEV N V FV GD + K I+ LL L
Sbjct: 549 DKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDL 590
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 139/284 (48%), Gaps = 27/284 (9%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM-PYTTI 214
N ++ K ++EA ++F+EM + D++ W +ISGY + G +++AR LFD++ +
Sbjct: 71 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNV 130
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
V+WTAM+ GY ++A +F +M + +S +++ AQ G ++ MY
Sbjct: 131 VTWTAMVGGYIRSNKISDAEKLFNEMPNKNV----VSWNTMIDGYAQNGRIDSA----MY 182
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
+ R V N ++ M +CG I +A +LFD+M ERDV+SW+ +I GL + +A
Sbjct: 183 LFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLD-----EA 237
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVD 394
+ LF M +P + GL+ G F+ M + + I GC+
Sbjct: 238 LDLFERMPERDLPSWNTMITGLI----QNGDLRRARKLFNEMPKKNVISWTTMITGCV-- 291
Query: 395 LLGRAGRLDQALNIIEEM----PMKPDAKIWGSLLSSCRTYSNL 434
+ G ++AL I M KP+ + S+L +C + L
Sbjct: 292 ---QEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGL 332
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 157/321 (48%), Gaps = 31/321 (9%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
PD T VI +G + + ++ + K + +T A++ Y + +++ +A K+
Sbjct: 96 PDVITWTTVI---SGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKL 152
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F EM ++++V+WN +I GYA+ G++ A LF+KMP +VSW ++S G EA
Sbjct: 153 FNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEAR 212
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+F +M E D IS +++ L E + ++ + R N +I
Sbjct: 213 RLFDRMP----ERDVISWTAMIAGL-------LDEALDLF--ERMPERDLPSWNTMITGL 259
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITF 353
I+ G + +A +LF++M +++V+SW+T+I G G++ +A+ +F M PN TF
Sbjct: 260 IQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTF 319
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH------YGCLVDLLGRAGRLDQALN 407
+ +L AC++ EG ++ H I K + L+++ + G L A
Sbjct: 320 VSVLGACSNLAGLGEG-------QQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARK 372
Query: 408 IIEE-MPMKPDAKIWGSLLSS 427
+ ++ M + D W ++++
Sbjct: 373 MFDDGMTSQRDLVSWNGIIAA 393
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 146/332 (43%), Gaps = 44/332 (13%)
Query: 42 LSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYK 101
L N ++T +I GDL A LF ++ + NV + MI A+ ++
Sbjct: 249 LPSWNTMITGLI----QNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFS 304
Query: 102 QMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL 161
+ML + + P++ T V+ +C+ L G+Q+H + K + + +AL+++
Sbjct: 305 RML----STNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINM 360
Query: 162 YGKCDELIEAHKVFEE--MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTA 219
Y KC EL A K+F++ + RD+V+WN +I+ YA
Sbjct: 361 YSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYA------------------------- 395
Query: 220 MISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKN 278
H G EA++ F++M+ G +PD+++ V +L AC+ G +E G ++
Sbjct: 396 ------HHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDR 449
Query: 279 HLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS-WSTVIGGLANHGKAHKAIHL 337
+L R L+++ + G + +A +++ + W ++ G H
Sbjct: 450 SILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQA 509
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
++ ++ P N T++ L + A TG W E
Sbjct: 510 AKKLLEVE-PENAGTYLLLSNIYASTGKWREA 540
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 53/248 (21%)
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D ++ N +I+ ++ G++ +AR LFD+M +++WT +ISGY G EA +F
Sbjct: 64 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLF-- 121
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
D+ + V A++ YI+
Sbjct: 122 ------------------------------------DRVDAKKNVVTWTAMVGGYIRSNK 145
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
I+ A +LF++M ++VVSW+T+I G A +G+ A++LF +M V +++ ++S
Sbjct: 146 ISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV----VSWNTVMSM 201
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
A G E FD M E + + ++ AG LD+AL++ E MP + D
Sbjct: 202 LAQCGRIEEARRLFDRMP-----ERDVISWTAMI-----AGLLDEALDLFERMPER-DLP 250
Query: 420 IWGSLLSS 427
W ++++
Sbjct: 251 SWNTMITG 258
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 56/289 (19%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ-- 71
FV +L +C NL L +++H I K + S F+V+ +I++ + G+L A +F
Sbjct: 319 FVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGM 378
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ ++ +N +I AY +H YG AIN +K+M + S PD T ++ +C+
Sbjct: 379 TSQRDLVSWNGIIAAYA-HHGYGKEAINFFKEMRK-----SGFKPDDVTYVGLLSACS-- 430
Query: 131 LCPSLGKQIHAHVCKFGLK---------SHSITEN---ALLDLYGKCDELIEAHKVFEEM 178
HA + + GLK S + E+ L+DL G+ L EA E +
Sbjct: 431 ---------HAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERL 481
Query: 179 -TDRDIVAWNNLISG-----YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
T W L++G ++G+ + A+ L + P ++ + + Y G + E
Sbjct: 482 ETKPSARVWGALLAGCNVHANVKIGK-QAAKKLLEVEPENA-GTYLLLSNIYASTGKWRE 539
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNH 279
A V +M+ G++ P C+ +E+G +H++ DK+H
Sbjct: 540 AARVRLKMKDKGLKKQ--------PGCSW---IEVGNRVHVFVVGDKSH 577
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 281/501 (56%), Gaps = 37/501 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+ +L C N+ ++++H ++ Q + K++ + A LF + +
Sbjct: 7 IDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDS 66
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++ M+ + + ++++LR + PD +TLPFVI++C +G+
Sbjct: 67 KTWSVMVGGFAKAGDHAGCYATFRELLR-----CGVTPDNYTLPFVIRTCRDRTDLQIGR 121
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
IH V K GL S +L+D+Y KC IV
Sbjct: 122 VIHDVVLKHGLLSDHFVCASLVDMYAKC-----------------IV------------- 151
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
++ A+ LF++M +V+WT MI Y +Y E+L +F +M+ G+ PD++++V+V+
Sbjct: 152 -VEDAQRLFERMLSKDLVTWTVMIGAYADCNAY-ESLVLFDRMREEGVVPDKVAMVTVVN 209
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACA+LG++ + + Y +N ++ A+I+MY KCG + A ++FD+M E++V+S
Sbjct: 210 ACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVIS 269
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
WS +I HG+ AI LFH M + PN +TF+ LL AC+H G EGL +F+SM
Sbjct: 270 WSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMW 329
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+H + ++HY C+VDLLGRAGRLD+AL +IE M ++ D ++W +LL +CR +S +E+A
Sbjct: 330 EEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELA 389
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
A LL L+P++ G+YVLLSNIYAK G+WE V++ R ++ + +KK PG + IEV+N+
Sbjct: 390 EKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNK 449
Query: 498 VQEFVSGDDTKPFLKDIFWLL 518
+F GD + P K+I+ +L
Sbjct: 450 TYQFSVGDRSHPQSKEIYEML 470
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 175/503 (34%), Positives = 279/503 (55%), Gaps = 36/503 (7%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
K IH ++ ++ + T + D+ + G + A L+F + + V +N+M+ Y N
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
AI ++++ML + I P T+ + +CA L GK +H V + L S
Sbjct: 328 GEPEKAIAVFEKMLEEG-----IDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGS 382
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
DI N+LIS Y++ ++ A +F+ +
Sbjct: 383 -------------------------------DISVMNSLISMYSKCKRVDIASDIFNNLN 411
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
T VSW AMI GY G +EAL+ F +M+ +G++PD ++VSV+PA A+L +W
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKW 471
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
IH ++ L + + AL++MY KCG I+ A +LFD + +R V++W+ +I G HG
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
A+ LF +M++ V PNDIT++ ++SAC+H+G +EGL +F SMK+D+ +E ++HYG
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
+VDLLGRAGR+ +A + IE MP+ P ++G++L +C+ + N+E+ A + L L P+
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPD 651
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
+ G +VLL+NIYA +W V+ +RK + K +KKTPGCS++E+ NEV F SG T P
Sbjct: 652 EGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQ 711
Query: 511 LKDIFWLLELLALHQDRAKDVID 533
K I+ LE L A V D
Sbjct: 712 SKRIYAFLEELVYEIKAAGYVPD 734
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 187/393 (47%), Gaps = 37/393 (9%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+ C ++ EL +I ++K L + TK++ + + G + A+ +F+ + + L
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
Y+ M++ Y N A+ +M D + P + +++K C GK+I
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDD-----VKPVVYNFTYLLKVCGDNADLKRGKEI 169
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H + ++ ++++Y KC ++ +A+K+F+ M +RD+V+WN +I+G+++ G
Sbjct: 170 HGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFA 229
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
KK AL++ +MQ G PD I++V+VLPA
Sbjct: 230 KK-------------------------------ALELVLRMQDEGQRPDSITLVTVLPAA 258
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A +G L +G+ IH Y + + I AL +MY KCG + A +FD M ++ VVSW+
Sbjct: 259 ADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWN 318
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+++ G +G+ KAI +F +M + P +T + L ACA G G +
Sbjct: 319 SMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG-KFVHKFVDQ 377
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
++ I L+ + + R+D A +I +
Sbjct: 378 LNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 193/409 (47%), Gaps = 50/409 (12%)
Query: 10 IKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS 66
+K + F +L+ C + +LK+ IH Q++ + + F +T ++++ + A
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
+F ++ E ++ +N +I ++ N A+ L +M + + PD TL V+ +
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQR-----PDSITLVTVLPA 257
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
A + +GK IH + + G AL D+Y KC + A +F+ M + +V+W
Sbjct: 258 AADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSW 317
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
N+++ GY + G+ +K A+ VF +M GI+
Sbjct: 318 NSMMDGYVQNGEPEK-------------------------------AIAVFEKMLEEGID 346
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
P ++I+ L ACA LG LE G+++H + D+ +L + N+LI MY KC ++ AS +
Sbjct: 347 PTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDI 406
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF- 365
F+ + R VSW+ +I G A +G+ +A++ F EM+ L + P+ T + ++ A A
Sbjct: 407 FNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVT 466
Query: 366 ----WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
W GL+ + ++ + LVD+ + G + A + +
Sbjct: 467 RHAKWIHGLIIRSCLDKNIFVT------TALVDMYSKCGAIHMARKLFD 509
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 132/325 (40%), Gaps = 35/325 (10%)
Query: 131 LCPSLGK--QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
LC S+ + QI V K GL + + + L+ L+ K + EA +VFE + D+
Sbjct: 58 LCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDK------- 110
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
D + +T M+ GY S AL +M+ ++P
Sbjct: 111 -----------------LDALYHT-------MLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+ +L C L+ G+ IH N ++ MY KC I+ A ++FD
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M ERD+VSW+T+I G + +G A KA+ L MQ P+ IT + +L A A G
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G R + L D+ + G ++ A I + M K W S++
Sbjct: 267 GKSIHGYAIR-AGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS-WNSMMDGY 324
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTG 453
E A+ E +L + TG
Sbjct: 325 VQNGEPEKAIAVFEKMLEEGIDPTG 349
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 15/236 (6%)
Query: 21 LQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
L +C +L +L++ +H + + L ++ +I + + + AS +F +
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL-PDKFTLPFVIKSCAGLLCPSLG 136
+NAMI Y N A+N + +M SL + PD FT+ VI + A L
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEM------KSLGMKPDSFTMVSVIPALAELSVTRHA 469
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K IH + + L + AL+D+Y KC + A K+F+ ++DR ++ WN +I GY
Sbjct: 470 KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTH 529
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEP 247
G + A LFDKM + +++ ++IS +H G E L F+ M Q G+EP
Sbjct: 530 GLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEP 585
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+P L K IH I++ L ++ F+ T ++D+ + G + A LF + + +V
Sbjct: 457 IPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHV 516
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--GLLCPSL 135
+NAMI Y + L A++L+ +M + + P+ T VI +C+ GL+ L
Sbjct: 517 ITWNAMIDGYGTHGLGRAALDLFDKMKK-----GAVEPNDITYLSVISACSHSGLVDEGL 571
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+ + +GL+ A++DL G+ + EA E M
Sbjct: 572 -RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENM 613
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 283/471 (60%), Gaps = 6/471 (1%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I G L LL Q +V + ++I AY+ + A+ +K ML
Sbjct: 177 TMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHG-- 234
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
I PD+ T+ V+ +CA L LG+ +H V + G+ + AL+D+Y KC +
Sbjct: 235 ---IAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFG 291
Query: 170 EAHKVFEEM-TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
A +VF+ + +WN +I GY + G + AR LFD+M I+++ +M++GY H G
Sbjct: 292 HAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSG 351
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
EAL +F M+ + D ++V++L ACA LG+L+ G +H ++ + +
Sbjct: 352 QLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGT 411
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY+KCG +++A+ +F +M +RDV +W+ +I GLA +G A+ F++M+ P
Sbjct: 412 ALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQP 471
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N +++I +L+AC+H+ NEG +YFD M+ ++I +IEHYGC++DLLGR+G LD+A+++
Sbjct: 472 NSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDL 531
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
++ MP++P+A IW S+LS+CR + ++++A A EHLL LEP++ G YV L NIY +W
Sbjct: 532 VKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQW 591
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
E+ S++R L+ + +KKT G S I V +V +FV D + P + +I +LE
Sbjct: 592 ENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLE 642
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 202/405 (49%), Gaps = 51/405 (12%)
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYT----NNHLYGLAINLYKQMLRDPRTGSLILPDK 117
L YA LF ++ P+ FL++ +RA + + H L L+++M R + + PD
Sbjct: 53 LRYALHLFDRMP-PSTFLFDTALRACSRAGSDPHRPFL---LFRRMRR-----AGVRPDG 103
Query: 118 FTLPFVIKSCAGLLCPS---LGKQIHAHVCKFGLKSHS-ITENALLDLYGKCDELIEAHK 173
FT F+ K + P L +HA + L S + N+L+ +Y + +A +
Sbjct: 104 FTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARR 163
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
F+E+ +D VAW LISG A++G + ++L + P ++SWT++I+ Y+ EA
Sbjct: 164 AFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREA 223
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
+ F+ M GI PDE+++++VL ACA+L LELG +H+ ++ + + ALI+M
Sbjct: 224 VGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDM 283
Query: 294 YIKCGCINQASQ--------------------------------LFDQMVERDVVSWSTV 321
Y KCG A Q LFD+M RD+++++++
Sbjct: 284 YAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSM 343
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
+ G + G+ +A+ LF M+R + ++ T + LL+ACA G +G +++
Sbjct: 344 MTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQ-RL 402
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+E I L+D+ + GR+D+A + + M K D W ++++
Sbjct: 403 VEADIYLGTALLDMYMKCGRVDEATIVFQRMG-KRDVHTWTAMIA 446
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 294/537 (54%), Gaps = 69/537 (12%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG-GDLAYASLLFKQVKEPNVF 78
+L++C+ L+++H I+ L Q +FLV I ++ L+YAS +F +V P+
Sbjct: 35 LLKACKKREHLEQVHACIIHRGLEQDHFLVFLFISRAHTLLSTLSYASSVFHRVLAPSTV 94
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
L+N +I+++ +L+ ++ + +M LPD FT P VIK+C+G GK
Sbjct: 95 LWNTLIKSHCQKNLFSHTLSAFARM-----KAHGALPDSFTYPSVIKACSGTCKAREGKS 149
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA------------- 185
+H + G+ +L+D+YGKC E+ +A KVF+ M+DR++V+
Sbjct: 150 LHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVGYVAVGD 209
Query: 186 ------------------WNNLISGYARLGQMKKARMLFDKMP------YTT-------- 213
WN+++ G+ ++G + AR +FD MP +TT
Sbjct: 210 VVEARKLFDEMPHRNVASWNSMLQGFVKMGDLSGARGVFDAMPEKNVVSFTTMIDGYAKA 269
Query: 214 -----------------IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+V+W+A+ISGY G +AL VF +M+++ ++PDE +VS++
Sbjct: 270 GDMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQALRVFLEMELMNVKPDEFILVSLM 329
Query: 257 PACAQLGSLELGEWIHMYCDKNHL-LRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
A AQLG LEL +W+ Y K + L++ + AL++M KCG + +A +LFD+ RDV
Sbjct: 330 SASAQLGHLELAQWVDSYVSKICIDLQQDHVIAALLDMNAKCGNMERALKLFDEKPRRDV 389
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
V + ++I GL+ HG+ +A++LF+ M + P+++ F +L+AC+ G +EG YF S
Sbjct: 390 VLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILTACSRAGLVDEGRNYFQS 449
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
MK+ + I +HY C+VDLL R+G + A +I+ +P +P A WG+LL +C+ Y + E
Sbjct: 450 MKQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHAGAWGALLGACKLYGDSE 509
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
+ I L LEP + NYVLLS+IYA RW DVS +R +R + ++K PG S I
Sbjct: 510 LGEIVANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKMRERRVRKIPGSSKI 566
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 274/504 (54%), Gaps = 44/504 (8%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD----LAYASLLFKQV 72
+P L C +L L ++H +K L LVT+++ +C G LAYA +F ++
Sbjct: 22 LLPHLPHCTSLRALAQLHAAAVKSGLGAHPALVTRLLTLCTKQGAAPAHLAYARQVFDRI 81
Query: 73 KEP-NVFLYNAMIRAYT-NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
P +V YN ++R Y ++ A + +ML + + PD +T ++K+CA
Sbjct: 82 PTPGDVVWYNTLLRGYARSSDGAAEAARVLARMLEEG-----VAPDTYTFVSLLKACAAA 136
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G+Q H K G H L+++Y +C
Sbjct: 137 RAGEEGRQAHGVAVKTGAADHEYVLPTLINMYAEC------------------------- 171
Query: 191 SGYARLGQMKKARMLFDKMPYT-TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
G + AR +F ++P +VS+ AMI+ EAL +FR+MQ G++P
Sbjct: 172 ------GDARSARAMFGRVPNGDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKPTS 225
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+++ SVL ACA LG+LELG WIH Y K L + ALI+MY KCG + A +F
Sbjct: 226 VTVTSVLSACALLGALELGRWIHEYVRKAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQG 285
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M RD +WS +I ANH +AI LF EM++ + P+ +TF+G+L AC+H+G +EG
Sbjct: 286 MESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIRPDAVTFLGVLYACSHSGMVSEG 345
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
L YFDSM R++ I I+HYGC+ DLL R+G+L++A I+E+P++P A +W +LLS+C
Sbjct: 346 LQYFDSM-REYGIVPGIKHYGCVTDLLARSGQLEKAYKFIDELPIQPTAILWRTLLSACG 404
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
++ +++ E +L L+ +YV+ SN+ A G+WE+++R+RKL+ K + K PGC
Sbjct: 405 SHGAVDLGKRVFERILELDDTHGSDYVIFSNLCANTGKWEEMNRVRKLMNEKGVVKVPGC 464
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKD 513
S IE++N V EF +GD P +D
Sbjct: 465 SSIEIDNRVHEFFAGDGRHPQSQD 488
>gi|334185681|ref|NP_189505.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g28640
gi|9294278|dbj|BAB02180.1| unnamed protein product [Arabidopsis thaliana]
gi|332643948|gb|AEE77469.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 181/513 (35%), Positives = 290/513 (56%), Gaps = 44/513 (8%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMID----VCNSGGDLAYASLLFKQVKEPNV 77
Q C + ++K H+ + + L ++ + ++K++ + N YAS +F ++ PN
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F+Y+ MIR + + L + + M+++ I P T F+I +C S+GK
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEED--IAPSYLTFHFLIVACLKACFFSVGK 136
Query: 138 QIHAHVCKFGL-KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
QIH V K G+ S S + +L +Y + L++A KVF
Sbjct: 137 QIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVF--------------------- 175
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
D++P +V W +++GY G +E L+VFR+M + G+EPDE S+ + L
Sbjct: 176 ----------DEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTAL 225
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDV 315
ACAQ+G+L G+WIH + K + V + AL++MY KCGCI A ++F ++ R+V
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNV 285
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFD 374
SW+ +IGG A +G A KA+ ++R + P+ + +G+L+ACAH GF EG +
Sbjct: 286 FSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLE 345
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+M+ + I K EHY C+VDL+ RAGRLD ALN+IE+MPMKP A +WG+LL+ CRT+ N+
Sbjct: 346 NMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 435 EIAVIAMEHLLVLEP----EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
E+ +A+++LL LE E+ V LSNIY R + S++R +I + ++KTPG S
Sbjct: 406 ELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 465
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
++EV+ V +FVSGD + P L I ++ LL++
Sbjct: 466 VLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSV 498
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 282/530 (53%), Gaps = 41/530 (7%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+ IL C E L K +H Q + L + T +I + G + A +F ++K
Sbjct: 266 FLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMK 325
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V + MIR Y N A L+ M + I PD+ T +I +CA
Sbjct: 326 VRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEG-----IQPDRITYIHIINACASSADL 380
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
SL ++IH+ V + G + + + AL+ +Y KC
Sbjct: 381 SLAREIHSQVVRAGFGTDLLVDTALVHMYAKC---------------------------- 412
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G +K AR +FD M +VSW+AMI Y G EA + F M+ +EPD ++ +
Sbjct: 413 ---GAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYI 469
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
++L AC LG+L+LG I+ K L+ + NALI M +K G I +A +F+ MV+R
Sbjct: 470 NLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQR 529
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DVV+W+ +IGG + HG A +A+ LF M + + PN +TF+G+LSAC+ GF EG +F
Sbjct: 530 DVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFF 589
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ I +E YGC+VDLLGRAG LD+A +I MP+KP++ IW +LL++CR Y N
Sbjct: 590 SYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGN 649
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L++A A E L+ EP D YV LS++YA G WE+V+++RK++ S+ ++K GC+ IE
Sbjct: 650 LDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIE 709
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELL--ALHQDRAKDVIDIMYEDIGE 541
V ++ FV D + P +I+ L L A+ ++ V + ++GE
Sbjct: 710 VEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGE 759
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 220/503 (43%), Gaps = 82/503 (16%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+V + Q C L + K++ I++ + + + +I + + G++ A F V+
Sbjct: 64 YVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVE 123
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
V +NA+I Y A L++QM+ + S+I T V+ +C+
Sbjct: 124 NKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSII-----TFLIVLDACSSPAGL 178
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LGK+ HA V K G S AL+ +Y K + A +VF+ + RD+ +N +I GY
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238
Query: 194 ARLGQMKKARMLF----------DKMPYTTI---------VSW----------------- 217
A+ G +KA LF +++ + +I ++W
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDV 298
Query: 218 ---TAMISGYTHIGS-------------------------YAE------ALDVFRQMQMV 243
TA+I Y GS YAE A +F MQ
Sbjct: 299 RVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEE 358
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
GI+PD I+ + ++ ACA L L IH + ++ AL+ MY KCG I A
Sbjct: 359 GIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDA 418
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
Q+FD M RDVVSWS +IG +G +A FH M+R V P+ +T+I LL+AC H
Sbjct: 419 RQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHL 478
Query: 364 GFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G + G+ +Y ++K D + I L+++ + G +++A I E M ++ D W
Sbjct: 479 GALDLGMEIYTQAIKAD--LVSHIPVGNALINMNVKHGSIERARYIFENM-VQRDVVTWN 535
Query: 423 SLLSSCRTYSNLEIAVIAMEHLL 445
++ + N A+ + +L
Sbjct: 536 VMIGGYSLHGNAREALDLFDRML 558
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 171/389 (43%), Gaps = 86/389 (22%)
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
D T + + C L LGKQ+ H+ + G + + N L+ L+ C ++EA + F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLF----DKMPYTTIVSW-------------- 217
+ + ++ +V WN +I+GYA+LG +K+A LF D+ +I+++
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 218 ---------------------TAMISGYTHIGS-------------------------YA 231
TA++S Y GS YA
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239
Query: 232 EALD------VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
++ D +F +MQ G +P+ IS +S+L C+ +L G+ +H C L+
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVR 299
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+ ALI MY+ CG I A ++FD+M RDVVSW+ +I G A + A LF MQ
Sbjct: 300 VATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEG 359
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-------CLVDLLGR 398
+ P+ IT+I +++ACA + S+ R+ H + +G LV + +
Sbjct: 360 IQPDRITYIHIINACASSADL--------SLAREIHSQVVRAGFGTDLLVDTALVHMYAK 411
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
G + A + + M + D W +++ +
Sbjct: 412 CGAIKDARQVFDAMS-RRDVVSWSAMIGA 439
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 123/248 (49%), Gaps = 9/248 (3%)
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA-------HK 173
P C + +G H + G S+ I + L+ +C L +A
Sbjct: 29 PVQSARCRSIFTGQVGANDVLH--RLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDH 86
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
+ + +I N LI ++ G M +AR FD + T+V+W A+I+GY +G EA
Sbjct: 87 IIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEA 146
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
+FRQM +EP I+ + VL AC+ L+LG+ H K + I AL+ M
Sbjct: 147 FALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSM 206
Query: 294 YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
Y+K G ++ A Q+FD + +RDV +++ +IGG A G KA LF+ MQ+ PN I+F
Sbjct: 207 YVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISF 266
Query: 354 IGLLSACA 361
+ +L C+
Sbjct: 267 LSILDGCS 274
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 176/501 (35%), Positives = 275/501 (54%), Gaps = 49/501 (9%)
Query: 21 LQSCENLIELKKIHTQILKYL--LSQSNFLVTKMIDVCNSGG-----DLAYASLLFKQVK 73
L C +L L ++H +K L VT+++ +C G LAYA +F ++
Sbjct: 35 LPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIP 94
Query: 74 EP-NVFLYNAMIRAYTNNHLYGL----AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
P +V YN ++R Y G A ++ +M+ + + PD +T ++K+CA
Sbjct: 95 HPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEG-----VAPDTYTFVSLLKACA 149
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
G+Q H K G H L+++Y +C
Sbjct: 150 SARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAEC----------------------- 186
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
G ++ AR++FD+M +VS+ AMI+ EAL +FR+MQ G++P
Sbjct: 187 --------GDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPT 238
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++++SVL ACA LG+LELG WIH Y K L + ALI+MY KCG + A +F
Sbjct: 239 SVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQ 298
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M RD +WS ++ ANHG +AI +F EM++ + P+D+TF+G+L AC+H+G +E
Sbjct: 299 DMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSE 358
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
GL YFDSM R++ I I+HYGC+ DLL R+G+L++A I+E+P+KP A +W +LLS+C
Sbjct: 359 GLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSAC 417
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
+ ++++ E +L L+ G+YV+ SN+ A GRWE+++ +RKL+ K + K PG
Sbjct: 418 AGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPG 477
Query: 489 CSLIEVNNEVQEFVSGDDTKP 509
CS IE++N V EF +GD + P
Sbjct: 478 CSSIEIDNMVHEFFAGDGSHP 498
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 160/356 (44%), Gaps = 41/356 (11%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L++C + E ++ H +K ++ ++ +I++ GD+ A ++F ++
Sbjct: 141 FVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMD 200
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
V YNAMI A + L G A+ L+++M + P TL V+ +CA L
Sbjct: 201 GECVVSYNAMITASVRSSLPGEALVLFREM-----QAKGLKPTSVTLISVLSACALLGAL 255
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+ IH ++ K L S AL+D+Y KC L +A VF++M RD AW+ ++ Y
Sbjct: 256 ELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAY 315
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G + EA+ +F +M+ G++PD+++ +
Sbjct: 316 ANHGYGR-------------------------------EAISMFEEMKKQGMKPDDVTFL 344
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VE 312
VL AC+ G + G + ++ + ++ + G + +A + D++ ++
Sbjct: 345 GVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIK 404
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ W T++ A HG +F + L + ++ + CA+TG W E
Sbjct: 405 PTAILWRTLLSACAGHGDVDMGKRVFERILELD-DSHGGDYVIFSNLCANTGRWEE 459
>gi|357118276|ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 280/508 (55%), Gaps = 46/508 (9%)
Query: 23 SCENLIELKKIHTQ-ILKYLLSQSNFLVTKMID-VCNSGGDLAYASLLFKQVKEPNVFLY 80
S N LK+IH ++K + S+ L ++ V + G + YA +F + P++F++
Sbjct: 6 SARNPRSLKQIHGNLVVKGITSRLQPLRELLLACVASFNGGMDYARKVFDGISHPDLFMH 65
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N M+R Y ++ A LY+++ + + PD FT +++++CAGL G Q+H
Sbjct: 66 NVMVRGYAHSAAPAAAFVLYRRI-----EAARLKPDSFTFCYLLRACAGLPGSCAGYQVH 120
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA--------------- 185
V K G + NAL++++ KC +L+ A + +E +RD+VA
Sbjct: 121 GAVVKLGYFKDAFVRNALINMHAKCGDLLVAGTLLDEAGERDVVARSAVIAGHAAKGELD 180
Query: 186 ----------------WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
WN +++ YA+ G+M+KAR L D+ P +VSW +I+GYT G
Sbjct: 181 IARQLFDECQHKDLVCWNVMVAAYAKYGEMEKARGLLDRAPEKDVVSWNTIITGYTAKGL 240
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC-- 287
EAL+V +M+ VG+ PDE +IVS+L CA LGSL G IH HL R I
Sbjct: 241 LKEALEVLDEMRCVGLMPDEATIVSLLSCCANLGSLGTGRMIHSL----HLEGRPCISIL 296
Query: 288 --NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
NAL+ MY KCG + A ++F +M ERDV +W+++IGGLA HG+A +++ F++M
Sbjct: 297 PGNALVSMYAKCGDVQAAMEVFSRMKERDVWTWNSIIGGLAFHGQAEQSVQFFNKMLDEG 356
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
+ PN+I+F+ +L AC+H G +G YF M + IE HY C+VD+LGR+G LD+A
Sbjct: 357 LCPNEISFLCVLGACSHAGLVEDGQRYFSLMINRYRIEPNARHYSCIVDMLGRSGLLDEA 416
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
I+ M +P IW +LL +CR + ++ + +A E LL + + +G+YVLLS IYA
Sbjct: 417 FAIVSSMRCEPAVVIWRTLLGACRIHGDVALGKLARERLLKMNEDASGDYVLLSGIYASC 476
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
W V +R + + ++K G + +E
Sbjct: 477 DEWFGVETVRGSMDERGIRKVAGYAQVE 504
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 292/523 (55%), Gaps = 46/523 (8%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
E K++H +LK + F ++ ++ C G + YA +F Q+ EP+ F YN MIR
Sbjct: 13 EFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYNTMIRG 72
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
N+ A+ LY M+ + PDKFT PFV+K+C+ L G Q+H HV K
Sbjct: 73 NVNDMKLEEALLLYVDMIERG-----VEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKM 127
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
GL+ D++ N+LI+ Y + G++K A +F
Sbjct: 128 GLEG-------------------------------DVIVQNSLINMYGKCGEIKNACDVF 156
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSL 265
+ M ++ SW+A+I + + + E L + +M G +E ++V+VL AC LGS
Sbjct: 157 NGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLSACTHLGSP 216
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+LG+ IH +N V+ +LI+MY+K GC+ + ++F M E++ S++ +I GL
Sbjct: 217 DLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGL 276
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A HG+ +A+ +F EM + P+D+ ++G+ SAC+H G EGL F SM+ +H IE
Sbjct: 277 AIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPT 336
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
++HYGC+VDLLGR G L +A +I+ M +KP+ IW SLLS+C+ + NLEI IA E+L
Sbjct: 337 VQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLF 396
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
+L ++G+Y++L+N+YAK +W+DV+++R + +++ +TPG SLIE +V +FVS D
Sbjct: 397 MLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQD 456
Query: 506 DTKPFLKDIF-------WLLELLALHQDRAKDVIDIMYEDIGE 541
+ P I+ W L+ D ++ ++D+ E+ E
Sbjct: 457 KSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVLLDVDDEEKKE 499
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 279/515 (54%), Gaps = 39/515 (7%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L++C + L ++IH Q +K S+F+ + + N G L Y LF+++
Sbjct: 220 FAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMS 279
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V + +I A+ + +M S + P+++T VI CA L
Sbjct: 280 MRDVVSWTTIITTLVQMGQEECAVQAFIRMRE-----SDVSPNEYTFAAVISGCANLARI 334
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+HA + GL + EN+++ +Y KC +L + +F EMT RDIV+W+ +I+GY
Sbjct: 335 EWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGY 394
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G + +EA ++ M+M G +P E ++
Sbjct: 395 XQGGHV-------------------------------SEAFELLSWMRMEGPKPTEFALA 423
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL AC + LE G+ +H Y L ++ +ALI MY KCG I +AS++FD
Sbjct: 424 SVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEND 483
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+ +I G A HG + + I LF ++ R+ + P+ +TFIG+LSAC+H G + G YF
Sbjct: 484 DIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYF 543
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
++M + + I EHYGC++DLL RAGRL A ++IE MP D +W +LL +CR + +
Sbjct: 544 NAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGD 603
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E E +L LEP G ++ L+NIYA G+W + + +RKL++SK + K PG S I+
Sbjct: 604 VERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIK 663
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
V + V FV+GD + P +DI+ +L+LLA + A
Sbjct: 664 VKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELA 698
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 213/516 (41%), Gaps = 86/516 (16%)
Query: 5 IGALSIKELEDRF--VPILQS--CENLIELKKIHTQILK--YLLSQSNFLVT-KMIDVCN 57
+ ALSI+ L R P + S C +L L++ + + + + +SQ++ + K +
Sbjct: 1 MAALSIRALGRRLFTAPAVASTECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELV 60
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
G L A +F ++ + + + +I Y N + A+ L+K M R S + D
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNM----RVESGLRIDP 116
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
F L K+C + G+ +H + K GL + +ALLD+Y K ++ E +V
Sbjct: 117 FILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRV--- 173
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
F +MP +VSWTA+I+G G EAL F
Sbjct: 174 ----------------------------FHEMPMRNVVSWTAIITGLVRAGYNKEALVYF 205
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
+M +E D + L ACA G+L G IH K + + N L MY KC
Sbjct: 206 SEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKC 265
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G + LF++M RDVVSW+T+I L G+ A+ F M+ V PN+ TF ++
Sbjct: 266 GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVI 325
Query: 358 SACAHTGF--WNEGL---------------------MY------------FDSMKRDHHI 382
S CA+ W E L MY F M R
Sbjct: 326 SGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTR---- 381
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM---KPDAKIWGSLLSSCRTYSNLEIAVI 439
I + ++ + G + +A ++ M M KP S+LS+C + LE
Sbjct: 382 -RDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440
Query: 440 AMEHLLVLEPEDTGNYV-LLSNIYAKHGRWEDVSRM 474
++L + E T + L N+Y K G E+ SR+
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRI 476
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 160/362 (44%), Gaps = 44/362 (12%)
Query: 14 EDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F ++ C NL ++ ++H IL L+ S + ++ + G L +S++F
Sbjct: 318 EYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAG 129
++ ++ ++ +I Y A L M + P+ P +F L V+ +C
Sbjct: 378 EMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPK------PTEFALASVLSACGN 431
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
+ GKQ+HA+V GL+ ++ +AL+++Y KC + EA ++F+ + DIV+W +
Sbjct: 432 MAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAM 491
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
I+GYA G ++ LF+K+P VG+ PD
Sbjct: 492 INGYAEHGYSREVIDLFEKIP-------------------------------RVGLRPDS 520
Query: 250 ISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++ + VL AC+ G ++LG + + K + +I++ + G ++ A + +
Sbjct: 521 VTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIE 580
Query: 309 QM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
M RD V WST++ HG + + +L+ P T I L + A G W
Sbjct: 581 AMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLE-PNCAGTHITLANIYASKGKWR 639
Query: 368 EG 369
E
Sbjct: 640 EA 641
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 285/512 (55%), Gaps = 31/512 (6%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
Q+ + + Q+ T M+ G + A L+F ++ PNV +NA+I YT N +
Sbjct: 448 QLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKE 507
Query: 96 AINLYKQM----------------------------LRDPRTGSLILPDKFTLPFVIKSC 127
A +L+++M + R+GS+ P + + +C
Sbjct: 508 AKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSV--PSDSSFTSALSAC 565
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
A + +G+ IH+ K G + +S N L+ +Y KC + + VF + +D V+WN
Sbjct: 566 ANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWN 625
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+LISG + + AR++F+KMP +VSWTA+IS Y G ALD+F M GI+P
Sbjct: 626 SLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKP 685
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+++++ S+L AC LG+++LGE H K + N+LI MY KCG +F
Sbjct: 686 NQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVF 744
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
++M E D+++W+ V+ G A +G +AI +F +M+ + P+ ++F+G+L AC+H G +
Sbjct: 745 EEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVD 804
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EG +F+SM + + I + HY C+VDLLGRAG L +A +IE MP+KPD+ IW +LL +
Sbjct: 805 EGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGA 864
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR + N+E+ E L + + YVLLSN++A G W+ V+ +RKL++ + + K P
Sbjct: 865 CRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEP 924
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
G S I+V N++ FV+GD T +++I+ L+
Sbjct: 925 GISWIQVKNKLHCFVTGDRTHDQIEEIYSALK 956
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 172/386 (44%), Gaps = 47/386 (12%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V + +A++ AYT N LA++ ++ M P++ + A C
Sbjct: 393 EGDVVVGSAILNAYTRNGSLDLAMHFFETM-----------PERNEYSWTTMIAAFAQCG 441
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
L I + + + T+ A++ Y + + +A +F+E+ + ++VAWN +I+GY
Sbjct: 442 RLDDAIQLY--ERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGY 499
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G +K+A+ LF KMP SW AMI+G+ EAL++ ++ G P + S
Sbjct: 500 TQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFT 559
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ-------- 305
S L ACA +G +E+G IH K + + N LI MY KCG + S
Sbjct: 560 SALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK 619
Query: 306 -----------------------LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
+F++M +RDVVSW+ +I G A+ LF +M
Sbjct: 620 DTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDML 679
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+ PN +T LLSAC + G G F ++ + + L+ + + G
Sbjct: 680 ARGIKPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLGFDTFLFVGNSLITMYFKCGYE 738
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSC 428
D + EEMP + D W ++L C
Sbjct: 739 D-GFCVFEEMP-EHDLITWNAVLVGC 762
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 208/460 (45%), Gaps = 63/460 (13%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLILPDKF 118
G + A +F ++ + +V +N+MI Y+ N A L+ + ++ RT +++L
Sbjct: 185 GRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYA 244
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+ ++ V + + + ++ NA++ Y + +L A K+F+EM
Sbjct: 245 KEGRIEEA--------------REVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEM 290
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
++++ +WN++++GY +M +AR LFD+MP VSW MISGY HI Y EA DVF
Sbjct: 291 PEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFV 350
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+M PD+ V VL A L LEL + K V+ +A++ Y + G
Sbjct: 351 KMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNG 410
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLL 357
++ A F+ M ER+ SW+T+I A G+ AI L+ +VP + T ++
Sbjct: 411 SLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYE-----RVPEQTVATKTAMM 465
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK-- 415
+A A G + + FD + + + + ++ + G L +A ++ ++MP+K
Sbjct: 466 TAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNS 520
Query: 416 --------------------------------PDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
P + S LS+C ++EI + +
Sbjct: 521 ASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRV-IHS 579
Query: 444 LLVLEPEDTGNYVL--LSNIYAKHGRWEDVSRMRKLIRSK 481
L + +YV+ L ++YAK G ED S + + IR K
Sbjct: 580 LAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK 619
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 157/327 (48%), Gaps = 29/327 (8%)
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
++H N + G+ + EA +VF EM RD+V+WN++I+GY++ G++ +AR+LFD
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDA 227
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
I +WT +++GY G EA +VF M E + +S +++ Q G L+
Sbjct: 228 FVGKNIRTWTILLTGYAKEGRIEEAREVFESM----TERNVVSWNAMISGYVQNGDLKNA 283
Query: 269 EWIHMYCDKNHLLRRTVIC-NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
+ + + + V N+++ Y C +++A +LFDQM ER+ VSW +I G +
Sbjct: 284 RKLF-----DEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVH 338
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
+A +F +M R P+ F+ +LSA GL + + I K
Sbjct: 339 ISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT-------GLDDLELIGSLRPIAIKTG 391
Query: 388 HYG------CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
+ G +++ R G LD A++ E MP + + W +++++ L+ A+
Sbjct: 392 YEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYS-WTTMIAAFAQCGRLDDAIQLY 450
Query: 442 EHLLVLEPEDT-GNYVLLSNIYAKHGR 467
E + PE T + YA+ GR
Sbjct: 451 ERV----PEQTVATKTAMMTAYAQVGR 473
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 173/408 (42%), Gaps = 49/408 (12%)
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
++ A LF Q+ E N + MI Y + Y A +++ +M R ++ PD+
Sbjct: 311 MSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCR-----TVARPDQSIFV 365
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
V+ + GL L + K G + + +A+L+ Y + L A FE M +R
Sbjct: 366 VVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER 425
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+ +W +I+ +A+ G++ A L++++P T+ + TAM++ Y +G +A +F
Sbjct: 426 NEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIF---- 481
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
DEI L V NA+I Y + G +
Sbjct: 482 ------DEI-----------------------------LNPNVVAWNAIIAGYTQNGMLK 506
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+A LF +M ++ SW+ +I G + ++ +A+ L E+ R P+D +F LSACA
Sbjct: 507 EAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACA 566
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
+ G G + S+ + L+ + + G ++ ++ + +K D W
Sbjct: 567 NIGDVEIGRV-IHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK-DTVSW 624
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
SL+S L+ A + E + D ++ + + Y + G E
Sbjct: 625 NSLISGLSENYMLDDARVVFEK---MPKRDVVSWTAIISAYVQAGHGE 669
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 290/516 (56%), Gaps = 16/516 (3%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQI-LKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
L + + + C I+ K+ Q+ L+ L S +N M+ G L A ++F
Sbjct: 84 LSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNN-----MVSGFVKSGMLVRARVVFDS 138
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ E +V +N M+ Y + A+ +K++ R S I ++F+ ++ +C
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEALWFFKELRR-----SGIKFNEFSFAGLLTACVKSR 193
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
L +Q H V G S+ + +++D Y KC ++ A + F+EMT +DI W LIS
Sbjct: 194 QLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GYA+LG M+ A LF +MP VSWTA+I+GY GS ALD+FR+M + ++P++ +
Sbjct: 254 GYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFT 313
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
S L A A + SL G+ IH Y + ++ ++ ++LI+MY K G + + ++F
Sbjct: 314 FSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICY 373
Query: 312 ER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
++ D V W+T+I LA HG HKA+ + +M + +V PN T + +L+AC+H+G EG+
Sbjct: 374 DKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGV 433
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+F+SM H I EHY CL+DLLGRAG + ++ IEEMP +PD IW ++L CR
Sbjct: 434 RWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPFEPDKHIWNAILGVCRI 493
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ N E+ A E L+ L+PE + Y+LLS+IYA HG+WE V ++R +++ + + K S
Sbjct: 494 HGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWELVEKLRGIMKKRRVNKEKAVS 553
Query: 491 LIEVNNEVQEFVSGDDTKPFL----KDIFWLLELLA 522
IE+ N+V+ F D + ++I+++L LA
Sbjct: 554 WIEIENKVKAFTVSDGSHAHAHARKEEIYFILHNLA 589
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 163/345 (47%), Gaps = 38/345 (11%)
Query: 120 LPF-----VIKSCAGLLCPSLGKQIHAHVCKFGLKS-HSITENALLDLYGKCDELIEAHK 173
LPF +++ C GK IH H+ G K +++ N L+ +Y KC + I+A K
Sbjct: 44 LPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACK 103
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
VF++M R++ +WNN++SG+ + G + +AR++FD MP +VSW M+ GY G+ EA
Sbjct: 104 VFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
L F++++ GI+ +E S +L AC + L+L + H L V+ ++I+
Sbjct: 164 LWFFKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 294 YIKCGCINQASQLFDQMVERDV-------------------------------VSWSTVI 322
Y KCG + A + FD+M +D+ VSW+ +I
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALI 283
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
G G A+ LF +M ++V P TF L A A G M R +
Sbjct: 284 AGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVR 343
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+ I L+D+ ++G L+ + + K D +W +++S+
Sbjct: 344 PNAIV-TSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISA 387
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 52/260 (20%)
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
+++S + ++A+ + GI + S+L C SL+ G+WIH +
Sbjct: 16 SLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 279 HLLR-RTVICNALIEMYIKCGCINQASQLFDQ---------------------------- 309
R T++ N LI MY+KCG A ++FDQ
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVV 135
Query: 310 ---MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
M ERDVVSW+T++ G A G H+A+ F E++R + N+ +F GLL+AC +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKS--- 192
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCL---------VDLLGRAGRLDQALNIIEEMPMKPD 417
++ + ++ G L +D + G+++ A +EM +K D
Sbjct: 193 -------RQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-D 244
Query: 418 AKIWGSLLSSCRTYSNLEIA 437
IW +L+S ++E A
Sbjct: 245 IHIWTTLISGYAKLGDMEAA 264
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 280/501 (55%), Gaps = 41/501 (8%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L C L +LK+ IH I L+ ++++ G L A LF ++
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
++ + +I Y+ + A+ L+ +ML P++FTL ++K+
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLG-----FQPNEFTLSSLLKASGTGPSD 222
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+HA K+G + ++LLD+Y
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMY------------------------------- 251
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR M++A+++F+ + +VSW A+I+G+ G + +F QM G EP +
Sbjct: 252 ARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYS 311
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL ACA GSLE G+W+H + K+ I N LI+MY K G I A ++F ++V++
Sbjct: 312 SVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQ 370
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+++I G A HG +A+ LF +M + KV PN+ITF+ +L+AC+H+G +EG YF
Sbjct: 371 DIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF 430
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ MK+ H IE ++ H+ +VDLLGRAGRL++A IEEMP+KP A +WG+LL +CR + N
Sbjct: 431 ELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKN 489
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+++ V A E + L+P D+G +VLLSNIYA GR D +++RK+++ +KK P CS +E
Sbjct: 490 MDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVE 549
Query: 494 VNNEVQEFVSGDDTKPFLKDI 514
+ NEV FV+ DD+ P ++I
Sbjct: 550 IENEVHVFVANDDSHPMREEI 570
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 144/313 (46%), Gaps = 36/313 (11%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P++ ++ C L G+ IHAH+ + + N +L++Y KC L EA +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F++M +D+V+W LISGY++ GQ +EAL
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQA-------------------------------SEAL 191
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+F +M +G +P+E ++ S+L A S G +H + K + ++L++MY
Sbjct: 192 ALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMY 251
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
+ + +A +F+ + ++VVSW+ +I G A G+ + LF +M R P T+
Sbjct: 252 ARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYS 311
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-CLVDLLGRAGRLDQALNIIEEMP 413
+L ACA +G +G + + I + G L+D+ ++G + A + +
Sbjct: 312 SVL-ACASSGSLEQGKWVHAHVIKSG--GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL- 367
Query: 414 MKPDAKIWGSLLS 426
+K D W S++S
Sbjct: 368 VKQDIVSWNSIIS 380
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+EP+ +L C L L+ G IH + + V+ N ++ MY KCG + +A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
LFD+M +D+VSW+ +I G + G+A +A+ LF +M L PN+ T LL A TG
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASG-TG 219
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+ + + + + L+D+ R + +A I + K + W +L
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNAL 278
Query: 425 LS 426
++
Sbjct: 279 IA 280
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 293/540 (54%), Gaps = 55/540 (10%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+P S + L ++K+IH+ ++ F+ +ID G + A +F ++ +V
Sbjct: 266 LPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDV 325
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLR-----DPRTGSLIL------------------ 114
+NAM+ YT + +G A L++ M + D T S ++
Sbjct: 326 VSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQ 385
Query: 115 -------PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
P+ T+ ++ +CA L S G +IHA+ K LL L
Sbjct: 386 MILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLK----------KCLLSL------ 429
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT--TIVSWTAMISGYT 225
+ + D++ +N LI Y++ K AR +FD +P +V+WT MI GY
Sbjct: 430 ---DNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYA 486
Query: 226 HIGSYAEALDVFRQM--QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
G +AL +F +M + + P+ +I +L ACA L +L +G+ IH Y ++H
Sbjct: 487 QYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEP 546
Query: 284 TV--ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
+V + N LI+MY KCG ++ A +FD M +R+ VSW++++ G HG+ +A+ +F +M
Sbjct: 547 SVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKM 606
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
Q+ P+DI+F+ LL AC+H+G ++GL YFD M+RD+ + EHY C++DLL R GR
Sbjct: 607 QKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGR 666
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
LD+A I+EMPM+P A IW +LLS+CR +SN+E+A A+ L+ ++ E+ G+Y L+SNI
Sbjct: 667 LDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNI 726
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
YA RW+DV+R+R+L++ +KK PGCS ++ F GD + P +I+ LLE L
Sbjct: 727 YANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERL 786
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 217/428 (50%), Gaps = 40/428 (9%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP---NVFLYNAMIRAY 87
+ +H I + F+ ++ + + G L ASL+F ++ +V +N+++ A+
Sbjct: 169 RALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAH 228
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFT--------LPFVIKSCAGLLCPSLGKQI 139
A+ L+ +M S+I+ +K T + ++ +CA L K+I
Sbjct: 229 VKGSNPRTALELFSEM-------SMIVHEKATNERSDIISIVNILPACASLKALPQIKEI 281
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H++ + G + + NAL+D Y KC + +A KVF M +D+V+WN +++GY + G
Sbjct: 282 HSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNF 341
Query: 200 KKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
A LF+ M I ++W+A+I+GY G EALD F+QM + G EP+ ++I+S+
Sbjct: 342 GAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISL 401
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLR------------RTVICNALIEMYIKCGCINQA 303
L ACA LG+L G IH Y K LL ++ NALI+MY KC A
Sbjct: 402 LSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAA 461
Query: 304 SQLFDQMV--ERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLLSA 359
+FD + ER+VV+W+ +IGG A +G ++ A+ +F EM + V PN T +L A
Sbjct: 462 RSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMA 521
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-CLVDLLGRAGRLDQALNIIEEMPMKPDA 418
CAH G + R H E + CL+D+ + G +D A N+ + MP + +
Sbjct: 522 CAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEV 581
Query: 419 KIWGSLLS 426
W S++S
Sbjct: 582 S-WTSMMS 588
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 168/346 (48%), Gaps = 35/346 (10%)
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
S+L + P V+ +N ++R + AI + +MLR + PD FTLP+ +K
Sbjct: 104 SVLERVTPSPAVW-WNLLVREHIKEGHLDRAIGVSCRMLR-----AGTKPDHFTLPYALK 157
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR---D 182
+C L G+ +H +C G +S+ NAL+ +Y +C L +A VF+E+T + D
Sbjct: 158 ACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDD 217
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+++WN++++ + + + A LF +M +MI H + E D+
Sbjct: 218 VISWNSIVAAHVKGSNPRTALELFSEM---------SMI---VHEKATNERSDI------ 259
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
ISIV++LPACA L +L + IH Y +N +CNALI+ Y KCG +N
Sbjct: 260 -------ISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMND 312
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
A ++F+ M +DVVSW+ ++ G G A LF M++ +P + IT+ +++ A
Sbjct: 313 AVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQ 372
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
G E L F M D + + L+ G L Q + I
Sbjct: 373 RGCSQEALDAFQQMILDGSEPNSVTIIS-LLSACASLGALSQGMEI 417
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 117/273 (42%), Gaps = 23/273 (8%)
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
+++ Y G K A + +++ + V W ++ + G A+ V +M G +
Sbjct: 87 TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD ++ L AC +L S G +H N +CNAL+ MY +CG + AS +
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206
Query: 307 FDQMVER---DVVSWSTVIGGLANHGKAHKAIHLFHEMQRL--KVPPND----ITFIGLL 357
FD++ + DV+SW++++ A+ LF EM + + N+ I+ + +L
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNIL 266
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHK----IEHYGC--LVDLLGRAGRLDQALNIIEE 411
ACA L +K H + + + C L+D + G ++ A+ +
Sbjct: 267 PACA-------SLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNV 319
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
M K D W ++++ N A E++
Sbjct: 320 MEFK-DVVSWNAMVTGYTQSGNFGAAFELFENM 351
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/387 (42%), Positives = 250/387 (64%), Gaps = 8/387 (2%)
Query: 140 HAHVCKFGLKSHSITENALLDLYGKC--DELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
H K G+ SH N +L Y KC +L A K+F+EM +D V + +I+ Y
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAY---- 56
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ A +F+ MP IV+W ++I+G+ G EAL ++++M G+EPD ++VS+L
Sbjct: 57 -FESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLS 115
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVV 316
ACA+L +L LG H+Y K L + NAL+++Y KCG I++A ++FD+M +ER+VV
Sbjct: 116 ACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVV 175
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+++I GLA +G +A+ F +M+R + P++ITF+G+L AC+H G NEG YF M
Sbjct: 176 SWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRM 235
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
K + I +IEHYGC+VDLLGRAG L +A + I++MP++P+A IW +LL +C + +L +
Sbjct: 236 KEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGL 295
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A LL LEP+D+G+YVLLSN+YA RW DV +R+ + S+ ++KTPG SL+E+ N
Sbjct: 296 GAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGN 355
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLAL 523
V EFV GD T P + I+ +L +A+
Sbjct: 356 HVHEFVMGDRTHPQSEAIYKMLVEMAM 382
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 41/294 (13%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F+ + E ++ +N++I + N A+ LYK+M + + PD FT+ ++ +C
Sbjct: 63 VFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEG-----VEPDGFTMVSLLSAC 117
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAW 186
A L LG++ H ++ K GL + NALLDLY KC + EA K+F+EM +R++V+W
Sbjct: 118 AELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSW 177
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
+LI G A ++G+ EAL+ F+ M+ G+
Sbjct: 178 TSLIVGLA--------------------------VNGFG-----KEALEHFKDMEREGLV 206
Query: 247 PDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
P EI+ V VL AC+ G + G E+ ++ ++ R ++++ + G + +A
Sbjct: 207 PSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYD 266
Query: 306 LFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
M ++ + V W T++G HG H + F + L++ P D LLS
Sbjct: 267 YIQDMPLQPNAVIWRTLLGACTIHG--HLGLGAFARARLLQLEPKDSGDYVLLS 318
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 270/469 (57%), Gaps = 5/469 (1%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
F+ T ++ + G + A +F + +V + M+ +Y Y A+ + +M
Sbjct: 106 FVRTALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKM--- 162
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
S +L D+ L V+ +C + GK IH+++ + ++ +AL++LY C
Sbjct: 163 --KNSGVLSDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCA 220
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ A K++ M +D+V+ ++ GYAR + + AR +FD MP +VSW+AMISGY
Sbjct: 221 SMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYAD 280
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
EAL +F MQ GI PDE++++SV+ ACA LGSL+ +WIH + N L + I
Sbjct: 281 SNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHI 340
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
CNALI+M+ KCG IN A +F++M +++V++W+++I A HG A+ LF +M+ V
Sbjct: 341 CNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGV 400
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
PN++TF+ LL AC H G +EG F SM + + IE K EHYGC+VDLLGRA + +A+
Sbjct: 401 EPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAV 460
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
N+IE M ++P+ +WGSLL++C + +L++ A + +L L+P G VLLS IY K
Sbjct: 461 NLIESMHLRPNVPVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSD 520
Query: 467 RWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
D +R +++ + + K G S +++N EF +G + P IF
Sbjct: 521 NLNDAQEVRDVMKLQGVSKETGLSWMDLNEPFHEFTAGGEKYPENDKIF 569
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 165/371 (44%), Gaps = 70/371 (18%)
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI---HAHVCKFGLKSHSITENALLDLYGK 164
RTG L P LP +++S A C G + HA + G AL+ Y
Sbjct: 61 RTG-LPPPGPRALPALLRSAA--RCVGAGAYVRGAHALAFRVGSLDDGFVRTALVGAYAA 117
Query: 165 CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGY 224
C + +A KVF+ M RD+V+W ++ Y + K+A + F KM + ++S
Sbjct: 118 CGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLS-------- 169
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT 284
D++ + +VL AC + L G+ IH Y + +L
Sbjct: 170 -----------------------DQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINA 206
Query: 285 VICNALIEMYIKCGCINQASQL-------------------------------FDQMVER 313
+ +ALI +Y C + A +L FD M E+
Sbjct: 207 HLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEK 266
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DVVSWS +I G A+ + ++A+ LF++MQ + P+++T + ++SACA+ G ++ +
Sbjct: 267 DVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKA-KWI 325
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ +++ + + L+D+ + G ++ ALNI EMP K + W S++++ + +
Sbjct: 326 HAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQK-NVITWTSMITAFAMHGD 384
Query: 434 LEIAVIAMEHL 444
+ A+ E +
Sbjct: 385 GKSALCLFEQM 395
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 9 SIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
I+ E + ++ +C NL L K IH I L++ + +ID+ G + A
Sbjct: 298 GIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLA 357
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F ++ + NV + +MI A+ + A+ L++QM + + P++ T ++
Sbjct: 358 LNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEG-----VEPNEVTFLNLLY 412
Query: 126 SC--AGLLCPSLGKQIHAH-VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR- 181
+C AGL+ G+ + + V ++G++ ++DL G+ + EA + E M R
Sbjct: 413 ACCHAGLV--HEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRP 470
Query: 182 DIVAWNNLISGYARLGQMK 200
++ W +L++ G +K
Sbjct: 471 NVPVWGSLLAACWMHGDLK 489
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/508 (35%), Positives = 280/508 (55%), Gaps = 39/508 (7%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ IL++C +L + ++IHTQ+LK + ++ + +ID+ G L +A +F+++K
Sbjct: 476 YPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK 535
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V + AMI Y + + A+NL+K+M I D I +CAG+
Sbjct: 536 EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQG-----IHSDNIGFASAISACAGIQAL 590
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ G+QIHA C G D+ N L+S Y
Sbjct: 591 NQGQQIHAQACVSGYSD-------------------------------DLSVGNALVSLY 619
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR G+++ A FDK+ +SW ++ISG+ G EAL +F QM G E + +
Sbjct: 620 ARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFG 679
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+ A A + +++LG+ IH K T + N LI +Y KCG I+ A + F +M E+
Sbjct: 680 PAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEK 739
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+ +SW+ ++ G + HG KA+ LF +M++L V PN +TF+G+LSAC+H G +EG+ YF
Sbjct: 740 NEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYF 799
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM+ H + K EHY C+VDLLGR+G L +A +EEMP++PDA + +LLS+C + N
Sbjct: 800 QSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKN 859
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
++I A HLL LEP+D+ YVLLSN+YA G+W R R++++ + +KK PG S IE
Sbjct: 860 IDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIE 919
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELL 521
VNN V F +GD P + I+ L L
Sbjct: 920 VNNSVHAFFAGDQKHPNVDKIYEYLRDL 947
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 194/421 (46%), Gaps = 57/421 (13%)
Query: 17 FVPILQSCENLIELKKI----HTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
F +L +C +E K+ H +LK S ++ ++ + + G+ A +F +
Sbjct: 274 FSSVLSACTK-VEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAM 332
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ + YN++I + A+ L+K+M D + PD T+ ++ +C+ +
Sbjct: 333 LQRDEVSYNSLISGLSQQGYSDKALELFKKMCLD-----CLKPDCVTVASLLSACSSVGA 387
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+GKQ H++ K G+ S I E ALLDLY KC ++ AH+
Sbjct: 388 LLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHE------------------- 428
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
F +V W M+ Y + + E+ +F QMQM GIEP++ +
Sbjct: 429 ------------FFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTY 476
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
S+L C+ L +++LGE IH K + + LI+MY K G ++ A ++F ++ E
Sbjct: 477 PSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKE 536
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+DVVSW+ +I G A H K +A++LF EMQ + ++I F +SACA N+G
Sbjct: 537 KDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQG--- 593
Query: 373 FDSMKRDHHIEHKIEHYG-------CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ H + + Y LV L R G++ A +++ K D W SL+
Sbjct: 594 -----QQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSK-DNISWNSLI 647
Query: 426 S 426
S
Sbjct: 648 S 648
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 159/334 (47%), Gaps = 37/334 (11%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
K+H +ILK L +++D+ + GDL A +F ++ + +N ++ +
Sbjct: 89 KLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGK 148
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP-SLGKQIHAHVCKFGLKS 150
+ G + L+++ML++ + PD+ T V++ C G P ++IHA G ++
Sbjct: 149 MAGRVLGLFRRMLQEK-----VKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYEN 203
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
N L+DLY K G + A+ +FD +
Sbjct: 204 SLFVCNPLIDLYFKN-------------------------------GFLNSAKKVFDGLQ 232
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
VSW AM+SG + G EA+ +F QM G+ P SVL AC ++ ++GE
Sbjct: 233 KRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQ 292
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
+H K T +CNAL+ +Y + G A Q+F+ M++RD VS++++I GL+ G
Sbjct: 293 LHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGY 352
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+ KA+ LF +M + P+ +T LLSAC+ G
Sbjct: 353 SDKALELFKKMCLDCLKPDCVTVASLLSACSSVG 386
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 196/437 (44%), Gaps = 49/437 (11%)
Query: 1 MAARIGALSIKELEDRFVP-------ILQSCEN----LIELKKIHTQILKYLLSQSNFLV 49
MA R+ L + L+++ P +L+ C ++KIH + + + S F+
Sbjct: 149 MAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVC 208
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
+ID+ G L A +F +++ + + AM+ + + A+ L+ QM
Sbjct: 209 NPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQM-----H 263
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
S + P + V+ +C + +G+Q+H V K G + NAL+ LY + I
Sbjct: 264 TSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFI 323
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
A +VF M RD V++N+LISG ++ G K
Sbjct: 324 PAEQVFNAMLQRDEVSYNSLISGLSQQGYSDK---------------------------- 355
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
AL++F++M + ++PD +++ S+L AC+ +G+L +G+ H Y K + ++ A
Sbjct: 356 ---ALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGA 412
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
L+++Y+KC I A + F +VV W+ ++ +++ +F +MQ + PN
Sbjct: 413 LLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPN 472
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
T+ +L C+ + G + + + + L+D+ + G+LD AL I
Sbjct: 473 QFTYPSILRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALKIF 531
Query: 410 EEMPMKPDAKIWGSLLS 426
+ K D W ++++
Sbjct: 532 RRLKEK-DVVSWTAMIA 547
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 136/327 (41%), Gaps = 44/327 (13%)
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
++V L+ Y G + A +FD+MP + W ++ + L +FR+M
Sbjct: 102 EVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRML 161
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELG--EWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
++PDE + VL C G + E IH + +CN LI++Y K G
Sbjct: 162 QEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGF 220
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+N A ++FD + +RD VSW ++ GL+ G +A+ LF +M V P F +LSA
Sbjct: 221 LNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSA 280
Query: 360 CAHTGFWNEG-LMYFDSMKRDHHIEHKIEH-----------------------------Y 389
C F+ G ++ +K+ +E + + Y
Sbjct: 281 CTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSY 340
Query: 390 GCLVDLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLEIA--------V 438
L+ L + G D+AL + ++M +KPD SLLS+C + L +
Sbjct: 341 NSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIK 400
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKH 465
M ++LE YV S+I H
Sbjct: 401 AGMSSDIILEGALLDLYVKCSDIKTAH 427
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
TA+ Y++ A ++ M+ G+ + + + +L C G G +H K
Sbjct: 37 TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
V+C L+++YI G ++ A +FD+M R + W+ V+ A + + L
Sbjct: 97 MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH--IEHKIEH--YGC-- 391
F M + KV P++ T+ G+L C G + F +++ H I H E+ + C
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCG------GGDVPFHCVEKIHARTITHGYENSLFVCNP 210
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
L+DL + G L+ A + + + K D+ W ++LS E AV+
Sbjct: 211 LIDLYFKNGFLNSAKKVFDGL-QKRDSVSWVAMLSGLSQSGCEEEAVL 257
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 285/484 (58%), Gaps = 18/484 (3%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L A L Q E NV + ++I Y+ A+ + ML D + PD+
Sbjct: 185 GLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDG-----VAPDEVA 239
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN---ALLDLYGKCDELIEAHKVFE 176
+ + +C+ L LG+ +H V G K +T+N AL+D+Y KC ++ +A VF+
Sbjct: 240 VIGALSACSKLKNLDLGRLLHLLV---GQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFD 296
Query: 177 EM-TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
+ + WN +I GY +LG + AR LFD+M ++++ +MI+GY H G +AL
Sbjct: 297 AVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQ 356
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
+F QM+ G+ D ++VS+L ACA LG+L G +H ++ + + AL++MY+
Sbjct: 357 LFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYM 416
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
KCG +++A+ +F +M ERDV +W+ +I GLA +G A+ F +M+R P +T+I
Sbjct: 417 KCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIA 476
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+L+AC+H+ +EG ++F+ M+ H + ++EHYGC++DLL R+G LD+A+++++ MPM+
Sbjct: 477 VLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQ 536
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
P+A IWGS+LS+CR + N+++A A EHLL L PE+ YV L NIY +W D R+R
Sbjct: 537 PNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVR 596
Query: 476 KLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIM 535
L+ + +KKT G S I V +V +FV+ D + P W LE++A+ ++ A + +
Sbjct: 597 MLMEERGVKKTAGYSSITVAGQVHKFVANDQSHP------WTLEIMAMMEEIACRLKSVG 650
Query: 536 YEDI 539
Y +
Sbjct: 651 YSPV 654
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 41/418 (9%)
Query: 44 QSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM 103
+ L++ + + ++ L Y LF ++ FL++ +RA L +
Sbjct: 33 SAEHLLSSLTNTISAPRHLRYVLSLFDRLPHSTTFLFDTALRACLQASAGADHPVLLLRR 92
Query: 104 LRDP--RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS-ITENALLD 160
+R RTG+ F LC L HA + L S + + N L+
Sbjct: 93 MRSGGVRTGAFTFHFVFRCCAAGARARAGLCLML----HAACLRTMLPSAAPLVANPLIH 148
Query: 161 LYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
+Y +A + F+E+ +D V W +I G R G + +AR L + P +VSWT++
Sbjct: 149 MYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSL 208
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
I+GY+ G A+A+ F M G+ PDE++++ L AC++L +L+LG +H+ + +
Sbjct: 209 IAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRI 268
Query: 281 LRRTVICNALIEMYIKCGCINQAS--------------------------------QLFD 308
+ ALI+MY KCG I QA LFD
Sbjct: 269 RMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFD 328
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
QM RDV++++++I G + G+ A+ LF +M+R + ++ T + LL+ACA G
Sbjct: 329 QMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPH 388
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
G S+++ +E + L+D+ + GR+D+A + M + D W ++++
Sbjct: 389 GRALHASIEQ-RIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGER-DVHTWTAMIA 444
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 138/346 (39%), Gaps = 71/346 (20%)
Query: 45 SNFLVTKMIDVCNSGGDLAYASLLFKQV-----KEP------------------------ 75
++ LV +ID+ GD+A A +F V EP
Sbjct: 271 TDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQM 330
Query: 76 ---NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+V +N+MI Y ++ A+ L+ QM R + D FT+ ++ +CA L
Sbjct: 331 GARDVITFNSMITGYIHSGRLRDALQLFMQMRRHG-----MRADNFTVVSLLTACASLGA 385
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
G+ +HA + + ++ ALLD+Y KC + EA VF M +RD+ W +I+G
Sbjct: 386 LPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAG 445
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
A G K +AL+ F QM+ G +P ++
Sbjct: 446 LAFNGMGK-------------------------------DALESFCQMKRDGFQPTSVTY 474
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGCINQASQLFDQM- 310
++VL AC+ L+ G H L V +I++ + G +++A L M
Sbjct: 475 IAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMP 534
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
++ + V W +++ H A H + +L P D ++ L
Sbjct: 535 MQPNAVIWGSILSACRVHKNIDLARHAAEHLLKL-APEEDAVYVQL 579
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 280/494 (56%), Gaps = 8/494 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
KK+H QI+K L+Q + +++ G + A LF + + + +++ A +
Sbjct: 23 KKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLS 82
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--GLLCPSLGKQIHAHVCKFGL 148
+ A+++ + +L TG PD F ++K+CA G+L GKQ+HA
Sbjct: 83 NRPHRALSISRSLLS---TG--FHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPF 137
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ +++L+D+Y K VF+ ++ + ++W +ISGYAR G+ +A LF +
Sbjct: 138 SDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQ 197
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLEL 267
PY + +WTA+ISG G+ +A +F +M+ GI D + + SV+ ACA L EL
Sbjct: 198 TPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWEL 257
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
G+ +H I NALI+MY KC + A +F +M +DVVSW+++I G A
Sbjct: 258 GKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQ 317
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
HG+A +A+ L+ EM V PN++TF+GL+ AC+H G ++G F +M DH I ++
Sbjct: 318 HGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQ 377
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
HY CL+DL R+G LD+A N+I MP+ PD W +LLSSC+ + N ++AV +HLL L
Sbjct: 378 HYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNL 437
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
+PED +Y+LLSNIYA G WEDVS++RKL+ + KK PG S I++ F +G+ +
Sbjct: 438 KPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETS 497
Query: 508 KPFLKDIFWLLELL 521
P +I L+ L
Sbjct: 498 HPMRDEIIGLMREL 511
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 158/390 (40%), Gaps = 85/390 (21%)
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
P L K++HA + K GL H N LL+ YGKC + +A ++F+ + RD VAW +L++
Sbjct: 19 PLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTA 78
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+S H AL + R + G PD
Sbjct: 79 --------------------------CNLSNRPH-----RALSISRSLLSTGFHPDHFVF 107
Query: 253 VSVLPACAQLGSLEL--GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN--------- 301
S++ ACA LG L + G+ +H + V+ ++LI+MY K G +
Sbjct: 108 ASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSI 167
Query: 302 ----------------------QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
+A +LF Q R++ +W+ +I GL G A HLF
Sbjct: 168 SSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFV 227
Query: 340 EMQRLKVPPND-ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC------L 392
EM+ + D + ++ ACA+ W G K+ H + + + C L
Sbjct: 228 EMRHEGISVTDPLVLSSVVGACANLALWELG-------KQMHGVVITLGYESCLFISNAL 280
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPE 450
+D+ + L A I EM K D W S++ + E A+ + +++ ++P
Sbjct: 281 IDMYAKCSDLVAAKYIFCEMCRK-DVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPN 339
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
+ +V L + + G VS+ R L R+
Sbjct: 340 EV-TFVGLIHACSHAGL---VSKGRTLFRT 365
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
S+ S L + A+ L L + +H K L + I N L+ Y KCG I A QLFD +
Sbjct: 6 SLQSQLCSAARQSPL-LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDAL 64
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
RD V+W++++ + H+A+ + + P+ F L+ ACA+ G
Sbjct: 65 PRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLG 118
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/469 (36%), Positives = 273/469 (58%), Gaps = 14/469 (2%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
EPN+ + ++I +Y + + A+ L+ M R + + + L VI CA L
Sbjct: 140 EPNLVTWTSLISSYARSGWHEEAMELFGLM----RMKGVEVSGE-ALAVVISICADLGAF 194
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
K IH + K G + +S ++AL+ +YGK ++ A +F EM ++ + +WN LI+ +
Sbjct: 195 VRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSH 254
Query: 194 ARLGQMKKARMLFDKMPYT--------TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
A G +A +F ++ + +VSW+A+I G+ G EAL++FR+MQ I
Sbjct: 255 AEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKI 314
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+ ++I +VL CA+L +L LG IH + + ++ ++ N L+ MY KCGC+ +
Sbjct: 315 LANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHM 374
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+F++ +D++SW+++I G HG A+ F +M +L P+ +TF+ +LS+C+H+G
Sbjct: 375 IFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGL 434
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+EG FD M + + IE ++EHY C+VDLLGRAG L +A I++ MP+ P+A +WG+LL
Sbjct: 435 VHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALL 494
Query: 426 SSCRTYSNLEIAVIAMEHLLVLE-PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+SCR ++N EIA HL L E TG Y+LLSNIYA GRWED +R+R ++K +K
Sbjct: 495 NSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLK 554
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
K PG S I+V V F +G++ + + IF +LE L +R V D
Sbjct: 555 KNPGQSWIKVEKNVYTFSAGNNMQRGFEQIFEILEELTFQMEREGTVHD 603
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 176/376 (46%), Gaps = 49/376 (13%)
Query: 95 LAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSIT 154
LAI++ + +R T L D FT P VI++CA + LGK IH HV + G +SH
Sbjct: 24 LAISVMPRRMRKIGT----LGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHV 79
Query: 155 ENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT-- 212
N L+ +Y K + +A +F+ M+ R ++WN ++S YA A +F +M
Sbjct: 80 GNELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGM 139
Query: 213 --TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+V+WT++IS Y G + EA+++F M+M G+E ++ V+ CA LG+ +
Sbjct: 140 EPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKI 199
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-------------------- 310
IH Y K + + +ALI +Y K G +N A LF +M
Sbjct: 200 IHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGL 259
Query: 311 ----------VER---------DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
+ER +VVSWS +I G A+ G+ +A+ LF MQ K+ N +
Sbjct: 260 CDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAV 319
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +LS CA + G + R + + + G LV++ + G L + I E+
Sbjct: 320 TISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNG-LVNMYAKCGCLKEGHMIFEK 378
Query: 412 MPMKPDAKIWGSLLSS 427
K D W S+++
Sbjct: 379 TERK-DLISWNSMITG 393
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 175/419 (41%), Gaps = 81/419 (19%)
Query: 5 IGALSIKELE---DRFVPILQSCENL---IELKKIHTQILKYLLSQSNFLVTKMIDVCNS 58
G + +K +E + ++ C +L + K IH +K + +F+ + +I V
Sbjct: 166 FGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGK 225
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD---PR------- 108
GD+ A LF ++K ++ +NA+I ++ L A+ ++ Q+ R PR
Sbjct: 226 HGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVS 285
Query: 109 ------------------------TGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
+ IL + T+ V+ CA L LG++IH HV
Sbjct: 286 WSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVV 345
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARM 204
+ + ++ + N L+++Y KC L E H +FE+ +D+++WN++I+GY G
Sbjct: 346 RAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHG------- 398
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
+G AL+ F QM +G +PD ++ V+VL +C+ G
Sbjct: 399 ----------------------LG--MNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGL 434
Query: 265 LELGEWIHMYCDKNHLLRRTVICNA-LIEMYIKCGCINQASQLFDQM-VERDVVSWSTVI 322
+ G + K + + + A ++++ + G + +AS++ M V + W ++
Sbjct: 435 VHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALL 494
Query: 323 GGLANHGKA----HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
H A HLF+ R T++ L + A +G W + S K
Sbjct: 495 NSCRMHNNTEIAEETASHLFNLSHR----ETTGTYMLLSNIYAASGRWEDSARVRTSAK 549
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 278/468 (59%), Gaps = 40/468 (8%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVKEPNVFLYNAMIRA 86
+LK+IH ++++ Q+ F+V K+I C + GD+ YA +F+++ +P+ F++N MIR
Sbjct: 3 DLKQIHARVIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTMIRG 62
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
+ + A + YK+M ++ D FT F++K C L LG+ +H K
Sbjct: 63 FGKANDPRKAFDYYKRMQERG-----LVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKR 117
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
GL SH N L+ +YG T +DI A +R LF
Sbjct: 118 GLNSHVFVRNTLVHMYG---------------TFKDIEA----------------SRQLF 146
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
+++P +V+W +I + G + EAL++F +M GIEPDE + V +L AC+ LG+L+
Sbjct: 147 EEIPNPELVAWNIIIDCHVSCGKFNEALEMFSRMLKFGIEPDEATFVVILSACSALGALD 206
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
G W+H T + N+L++MY KCG + +A ++F+ M +++ V+W+T+I GLA
Sbjct: 207 FGRWVHSCISNIGHGCITEVNNSLLDMYAKCGALQEAFEIFNGMNKKNTVTWNTMILGLA 266
Query: 327 NHGKAHKAIHLFHEMQRLKV-PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
+HG A++A+ LF M K+ P+DITF+ +LSAC+H G ++G +FD MK+++HI+
Sbjct: 267 SHGYANEALALFSNMLEQKLWAPDDITFLVVLSACSHGGMVDKGWRFFDIMKKEYHIQPT 326
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
I+HYGC+VD+LGRAG +++A +I MPM+ +A +W +LL++CR + N+E+ + LL
Sbjct: 327 IKHYGCMVDILGRAGFVEEAYRLISNMPMQCNAIVWRTLLAACRLHGNVELGKQVRKQLL 386
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT-PGCSLI 492
LEP+ + +YVLL+N YA GRW + R+RK + + ++K PG S++
Sbjct: 387 ELEPDHSSDYVLLANTYASAGRWNEAMRVRKTMHKRGVQKPEPGNSVV 434
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 297/512 (58%), Gaps = 17/512 (3%)
Query: 20 ILQSCENLI--ELKKIHTQILKYLLSQSNFLVTKMID--VCNSGGDLAYASLLFKQVKEP 75
+LQ +NL + K+IH + L++ +++ ++++ + GD YA LF + P
Sbjct: 28 LLQQWQNLTMKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMPNP 87
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
N+F YN++I +YT N + +++++ +ML I P+ T ++KSC L S
Sbjct: 88 NIFDYNSIITSYTTNSQFDKSLSVFTKMLNMN-----IRPNSHTFTTLVKSCVTL---SS 139
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
+Q+ K G S +++++++ K + A +VF+E ++R++V W +L+SGY
Sbjct: 140 LEQVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCS 199
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ-----MVGIEPDEI 250
G + + R +FDKMP S +AM+SGY ++E + +FR+++ ++ +
Sbjct: 200 CGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGA 259
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+VSVL AC +G+ E G+WIH Y ++N L + ALI+ Y KCG + A ++FD+M
Sbjct: 260 LLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKM 319
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+ +DV +WS +I GLA +G A+ LF +M+++ PN++TF+G+L+AC H + E
Sbjct: 320 LVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESS 379
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
F M ++I IEHYGC+VD+L R+G++ +AL I M ++PD IWGSLL+ C
Sbjct: 380 RLFGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLM 439
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ + E+ ++L+ +PE +G YVLL+N+YA G+WE VS +RKL++ + + G S
Sbjct: 440 HGHYELGQKVGKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWS 499
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
IE++ + +F + D + +I+ +L L
Sbjct: 500 FIEIDQTLHKFSADDKCCLYSGEIYEVLSHLG 531
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 278/470 (59%), Gaps = 7/470 (1%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
+I + G A+ F+++ + ++ +N+MI Y+ A+ ++ +ML +P
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPS--- 270
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
+ PD FTL ++ +CA L ++GKQIHA++ + ++ NAL+ +Y K + A
Sbjct: 271 -LKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329
Query: 172 HKVFE--EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+ E ++ +I+A+ +L+ GY +LG +K AR +F+K+ +V+WTAMI GY G
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGL 389
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ +AL++FR M G EP+ ++ ++L + L LE G+ IH K + NA
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNA 449
Query: 290 LIEMYIKCGCINQASQLFD-QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
LI MY K G IN A ++FD ++++VSW+++I LA HG +AI+LF M + + P
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ IT++G+LSAC H G +G Y++ M H IE + HY C++DL GRAG L +A
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF 569
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
IE MP++PD WGSLL+SC+ + N ++A +A E LL+++P ++G Y+ L+N+Y+ G+W
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
E+ ++ RKL++ + ++K G S I + NEV F D P +I+ L+
Sbjct: 630 ENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLM 679
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 170/379 (44%), Gaps = 37/379 (9%)
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
P G+ +H + K GL N L+ Y K L AH VF+EM + +WN LISG
Sbjct: 26 PFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISG 85
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA+ G + +R L +MP VSWTA+I GY G + A+ +F +M + P + ++
Sbjct: 86 YAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTV 145
Query: 253 VSVLPACAQLGSLELGEWIHMYCDK----------NHLLRRTVIC--------------- 287
+VL +CA +L++G IH + K LL C
Sbjct: 146 SNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTV 205
Query: 288 ------NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
NALI +Y++ G A+ F++M +RD+VSW+++I G + G +A+ +F +M
Sbjct: 206 KNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKM 265
Query: 342 -QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
+ P++ T +LSACA+ N G + R E L+ + ++G
Sbjct: 266 LNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA-ETETSGAVGNALISMYAKSG 324
Query: 401 RLDQALNIIE-EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLS 459
++ A I+E + + SLL Y+ L A E L D + +
Sbjct: 325 GVEIARLIVEHNRTSNLNIIAFTSLLDG---YTKLGNVKPAREIFNKLRDRDVVAWTAMI 381
Query: 460 NIYAKHGRWEDVSRMRKLI 478
Y ++G W D + +L+
Sbjct: 382 VGYVQNGLWNDALELFRLM 400
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 288/481 (59%), Gaps = 8/481 (1%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+ + ++C ++++ + H Q+LK F+ +I + G+L YA +F ++
Sbjct: 160 FIYLFKACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMD 219
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ ++ +N++I Y+ + + ++L+ ++R+ + D T+ VI +C+ L
Sbjct: 220 DRDLVSWNSLICGYSQCNRFKEVLDLF-NLMREAN----VTADSVTMVKVILACSYLCED 274
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ + ++ + N+L+D+YG+ + A +VF+ M +++IV+WN +++GY
Sbjct: 275 GVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGY 334
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G + A+ LF++MP ++SWT MISG ++AL +F++M ++PDEI++
Sbjct: 335 ATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVS 394
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL AC+ LG L+ G+ +H Y ++ + + NALI+MY KCG +++A ++F M ++
Sbjct: 395 SVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKK 454
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D VSW+++I GLA +G LF +M R + P +FIG+L AC H G ++GL YF
Sbjct: 455 DSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYF 514
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM+ + + +++HYGC+VDLL R+G LD+A I++MP+ PD +W LLS+C+ + N
Sbjct: 515 ESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRN 574
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L +A IA LL L+P ++GNYVLLSN YA RW+D SRMR L+ ++K S IE
Sbjct: 575 LVLAEIATSKLLELDPSNSGNYVLLSNTYAGSDRWDDASRMRDLMVVGDVQKPSSWSSIE 634
Query: 494 V 494
V
Sbjct: 635 V 635
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 186/399 (46%), Gaps = 68/399 (17%)
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
S L A+ F Q+ +P + ++N +IR + + AI +Y ++ + IL D
Sbjct: 102 SRSHLNKANFAFIQIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQG----ILGDN 157
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
T ++ K+C+ + G+ H V K G S+ EN+L+ +YG EL A KVF++
Sbjct: 158 LTFIYLFKACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDK 217
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M DRD+V+WN+LI GY++ + K E LD+F
Sbjct: 218 MDDRDLVSWNSLICGYSQCNRFK-------------------------------EVLDLF 246
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
M+ + D +++V V+ AC+ L + + + Y + H+ + N+LI+MY +
Sbjct: 247 NLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRR 306
Query: 298 GCINQASQLFDQMVE-------------------------------RDVVSWSTVIGGLA 326
G ++ A ++FD+M E R+V+SW+ +I G A
Sbjct: 307 GLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCA 366
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+ A+ LF EM V P++IT +LSAC+H G + G + M R H I+ +
Sbjct: 367 QANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCR-HDIKSDV 425
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
L+D+ + G +D+AL + +M K D+ W S++
Sbjct: 426 YVGNALIDMYCKCGVVDKALEVFHDMK-KKDSVSWTSMI 463
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 280/478 (58%), Gaps = 11/478 (2%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVKEPNVFL 79
+ C + +LK +H + L ++ K+ GDL YA +F Q+ P F
Sbjct: 15 ERCTCMRDLKLLHAHAFRTRLHDHTVVLGKLFRFAAVSPLGDLRYAHRMFDQMPHPTTFF 74
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
YN +IRA+ ++ L+ + M ++ + PD+F+ F++KS + + +
Sbjct: 75 YNTLIRAHAHSTTPSLSSLSFNLMRQNN-----VAPDQFSFNFLLKSRSRTTPLTHHNDV 129
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT----DRDIVAWNNLISGYAR 195
H V KFG H +N L+ Y + A +VFE++ + D+V+W+ L+ + +
Sbjct: 130 HGAVLKFGFCRHLHVQNGLIHFYANRGMTLLARRVFEDVLQLGLEVDVVSWSGLLVAHVK 189
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G+++ AR +FD+MP +VSWTAM++GY+ EAL++F +M+ G+ PDE+++VS+
Sbjct: 190 AGELEVARRVFDEMPQRDVVSWTAMLTGYSQAKRPREALELFGEMRRSGVWPDEVTMVSL 249
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ ACA LG +E G +H + ++N +CNALI+MY KCGC+ +A ++F M + +
Sbjct: 250 VSACASLGDMETGMMVHRFVEENGFGWMVALCNALIDMYGKCGCLEEAWRVFHGMTRKSL 309
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
++W+T++ AN+G A +A LF M V P+ +T + LL A AH G +EG+ F+S
Sbjct: 310 ITWNTMVTVCANYGNADEAFRLFEWMVCSGVVPDSVTLLALLVAYAHKGLVDEGIRLFES 369
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M RD+ +E +IEHYG ++D+LGRAGRL +A +++ +P+ + +WG+LL +CR + ++E
Sbjct: 370 MDRDYGVEPRIEHYGAVIDMLGRAGRLQEAYDLLTNIPIPCNDAVWGALLGACRIHGDVE 429
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+ ++ LL L+P++ G Y+LL +IY G+ + + R+ + + +K PGCS +E
Sbjct: 430 MGEKLIKKLLELKPDEGGYYILLRDIYVAAGQTVEANETRQAMLASRARKNPGCSWVE 487
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 270/499 (54%), Gaps = 47/499 (9%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG----DLAYASLLFKQVKEP- 75
L C +L L ++H +K L+ LVT+++ +C G LAYA +F +V +P
Sbjct: 32 LPHCTSLRGLAQLHAAAVKAGLAAHPALVTRLLTLCTGPGAGPAHLAYARQVFDRVTQPS 91
Query: 76 NVFLYNAMIRAYTNNHLYGLA-----INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ YN ++R Y + + + ++ +ML + + PD +T ++K+CA
Sbjct: 92 DAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEG-----VAPDTYTFVSLLKACAAA 146
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G+Q HA K G H L+++Y +C
Sbjct: 147 RAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAEC------------------------- 181
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
G + AR+ F + +VS+ AMI+ EAL +FR+MQ G+ P +
Sbjct: 182 ------GDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPV 235
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+++SVL ACA LG+L+LG W+H Y K L + AL++MY KCG + A +F M
Sbjct: 236 TVISVLSACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGM 295
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
RD +WS +I ANHG +AI LF EM++ + P+DITF+GLL AC+H+G +EGL
Sbjct: 296 ESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGL 355
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
YFD MK DH I I+HYGC+ DLL R+G+L++A I+E+P+ P +W +LLS+C
Sbjct: 356 RYFDDMK-DHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGG 414
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ ++E+ E +L L+ G+YV+ SN+ A G WE+++R+RKL+ K + K PGCS
Sbjct: 415 HGDVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCS 474
Query: 491 LIEVNNEVQEFVSGDDTKP 509
IE++N V EF +GD P
Sbjct: 475 SIEIDNTVHEFFAGDGRHP 493
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 158/358 (44%), Gaps = 45/358 (12%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L++C ++ H +K + +++ +I++ GD A + F +
Sbjct: 136 FVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRAD 195
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
V YNAMI A + G A+ L+++M + P T+ V+ +CA L
Sbjct: 196 GDCVVSYNAMIAAAVRSSRPGEALVLFREM-----QAKGLNPTPVTVISVLSACALLGAL 250
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+ +H +V K GL S AL+D+Y KC L +A VF+ M RD AW+ +I Y
Sbjct: 251 QLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAY 310
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G + EA+ +F +M+ G++PD+I+ +
Sbjct: 311 ANHGYGR-------------------------------EAISLFEEMKKQGMKPDDITFL 339
Query: 254 SVLPACAQLGSLELGEWIHMYCD-KNHLLRRTVI-CNALIEMYIKCGCINQASQLFDQM- 310
+L AC+ G + E + + D K+H + + + ++ + G + +A + D++
Sbjct: 340 GLLYACSHSGLVS--EGLRYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELP 397
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ + W T++ HG +F + L + ++ + CA+TG+W E
Sbjct: 398 INPTPILWRTLLSACGGHGDVELGKRVFERILELD-DSHGGDYVIFSNLCANTGYWEE 454
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/460 (39%), Positives = 259/460 (56%), Gaps = 39/460 (8%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N+MI AY + A+ L+++M+R + D FTL V+ + L S G Q
Sbjct: 208 WNSMIVAYGQHQEGSKALGLFQEMVRRG-----LNVDMFTLASVLTAFTCLEDLSGGLQF 262
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDE-LIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
H + K G +S + L+DLY KC + + KVFEE+T+ D+
Sbjct: 263 HGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDL--------------- 307
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE-ALDVFRQMQMVGIEPDEISIVSVLP 257
V W M+SGY+ + E AL+ FRQMQ +G P++ S V V+
Sbjct: 308 ----------------VLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVIS 351
Query: 258 ACAQLGSLELGEWIHMYCDKNHL-LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+ L S G+ IH K+ + R + NALI MY KCG + A +LFD+M E + V
Sbjct: 352 ACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTV 411
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
S +++I G A HG +++HLF M ++ P ITFI +LSACAHTG EG YF+ M
Sbjct: 412 SLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMM 471
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
K +IE + EHY C++DLLGRAG+L +A N+I MP P + W SLL +CRT+ N+E+
Sbjct: 472 KEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIEL 531
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
AV A +L LEP + YV+LSN+YA GRWE+V+ +RK +R + +KK PGCS IEV
Sbjct: 532 AVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKK 591
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
+ FV+ D + P +K+I+ LE ++ RA V D+ +
Sbjct: 592 RIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRW 631
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 189/431 (43%), Gaps = 69/431 (16%)
Query: 16 RFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
RF +L++C +L K +H+ +K + S + I + + G LA+A F+ +
Sbjct: 10 RFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDI 69
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD-------------------PRTGSL- 112
+PNVF +NA+I AY +A L+ Q+ P G
Sbjct: 70 SDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 113 ------ILPDKFTLPFVIKSCAGLLCPSLG--KQIHAHVCKFGLKSHSITENALLDLYGK 164
+ D FTL VI +C C +G Q+H+ G S+ NALL YGK
Sbjct: 130 GMREMGLDMDXFTLSAVITAC----CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 165 CDELIEAHKVFEEMTD-RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
+L +A +VF M RD V+WN++I Y GQ ++
Sbjct: 186 NGDLDDAKRVFYGMGGIRDEVSWNSMIVAY---GQHQEG--------------------- 221
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
++AL +F++M G+ D ++ SVL A L L G H K +
Sbjct: 222 -------SKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN 274
Query: 284 TVICNALIEMYIKC-GCINQASQLFDQMVERDVVSWSTVIGGLA-NHGKAHKAIHLFHEM 341
+ + + LI++Y KC G ++ ++F+++ E D+V W+T++ G + N A+ F +M
Sbjct: 275 SHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM 334
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
Q + PND +F+ ++SAC++ ++G + ++I L+ + + G
Sbjct: 335 QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGN 394
Query: 402 LDQALNIIEEM 412
L A + + M
Sbjct: 395 LQDARRLFDRM 405
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 45/367 (12%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDV-CNSGGDLAYASLLFKQVKEPNVFLYNAM 83
E+L + H Q++K Q++ + + +ID+ GG ++ +F+++ EP++ L+N M
Sbjct: 254 EDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTM 313
Query: 84 IRAYTNNHLY-GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+ Y+ N + A+ ++QM G P+ + VI +C+ L PS GKQIH+
Sbjct: 314 VSGYSQNEEFLEDALECFRQM-----QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368
Query: 143 VCKFGLKSHSIT-ENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG-QMK 200
K + S+ I+ +NAL+ +Y KC L +A ++F+ M + + V+ N++I+GYA+ G +M
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEM- 427
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
E+L +F+ M I P I+ +SVL ACA
Sbjct: 428 -------------------------------ESLHLFQWMLERQIAPTSITFISVLSACA 456
Query: 261 QLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSW 318
G +E G + +M +K ++ + +I++ + G +++A L +M + W
Sbjct: 457 HTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGW 516
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
++++G HG A+ +++ +L+ P N ++ L + A G W E + R
Sbjct: 517 ASLLGACRTHGNIELAVKAANQVLQLE-PSNAAPYVVLSNMYASAGRWEE-VATVRKFMR 574
Query: 379 DHHIEHK 385
D ++ K
Sbjct: 575 DRGVKKK 581
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 22/314 (7%)
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
++K+C S GK +H+ K + + N + LY KC L A K F++++D +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+ ++N +I+ YA+ + A LFD++P +VS+ +IS Y G A AL +F M+
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 243 VGIEPDEISIVSVLPAC-------AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
+G++ D ++ +V+ AC QL S+ + Y N NAL+ Y
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVN---------NALLTYYG 184
Query: 296 KCGCINQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
K G ++ A ++F M RD VSW+++I H + KA+ LF EM R + + T
Sbjct: 185 KNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLA 244
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC-LVDLLGR-AGRLDQALNIIEEM 412
+L+A + GL + + + H+ H G L+DL + G + + EE+
Sbjct: 245 SVLTAFTCLEDLSGGLQFHGQLIKTGF--HQNSHVGSGLIDLYSKCGGGMSDCRKVFEEI 302
Query: 413 PMKPDAKIWGSLLS 426
+PD +W +++S
Sbjct: 303 -TEPDLVLWNTMVS 315
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/460 (39%), Positives = 259/460 (56%), Gaps = 39/460 (8%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N+MI AY + A+ L+++M+R + D FTL V+ + L S G Q
Sbjct: 208 WNSMIVAYGQHQEGSKALGLFQEMVRRG-----LNVDMFTLASVLTAFTCLEDLSGGLQF 262
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDE-LIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
H + K G +S + L+DLY KC + + KVFEE+T+ D+
Sbjct: 263 HGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDL--------------- 307
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE-ALDVFRQMQMVGIEPDEISIVSVLP 257
V W M+SGY+ + E AL+ FRQMQ +G P++ S V V+
Sbjct: 308 ----------------VLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVIS 351
Query: 258 ACAQLGSLELGEWIHMYCDKNHL-LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+ L S G+ IH K+ + R + NALI MY KCG + A +LFD+M E + V
Sbjct: 352 ACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTV 411
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
S +++I G A HG +++HLF M ++ P ITFI +LSACAHTG EG YF+ M
Sbjct: 412 SLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMM 471
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
K +IE + EHY C++DLLGRAG+L +A N+I MP P + W SLL +CRT+ N+E+
Sbjct: 472 KEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIEL 531
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
AV A +L LEP + YV+LSN+YA GRWE+V+ +RK +R + +KK PGCS IEV
Sbjct: 532 AVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKK 591
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
+ FV+ D + P +K+I+ LE ++ RA V D+ +
Sbjct: 592 RIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRW 631
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 189/431 (43%), Gaps = 69/431 (16%)
Query: 16 RFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
RF +L++C +L K +H+ +K + S + I + + G LA+A F+ +
Sbjct: 10 RFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDI 69
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD-------------------PRTGSL- 112
+PNVF +NA+I AY +A L+ Q+ P G
Sbjct: 70 SDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFS 129
Query: 113 ------ILPDKFTLPFVIKSCAGLLCPSLG--KQIHAHVCKFGLKSHSITENALLDLYGK 164
+ D FTL VI +C C +G Q+H+ G S+ NALL YGK
Sbjct: 130 GMREMGLDMDGFTLSAVITAC----CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 165 CDELIEAHKVFEEMTD-RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
+L +A +VF M RD V+WN++I Y GQ ++
Sbjct: 186 NGDLDDAKRVFYGMGGIRDEVSWNSMIVAY---GQHQEG--------------------- 221
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
++AL +F++M G+ D ++ SVL A L L G H K +
Sbjct: 222 -------SKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN 274
Query: 284 TVICNALIEMYIKC-GCINQASQLFDQMVERDVVSWSTVIGGLA-NHGKAHKAIHLFHEM 341
+ + + LI++Y KC G ++ ++F+++ E D+V W+T++ G + N A+ F +M
Sbjct: 275 SHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM 334
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
Q + PND +F+ ++SAC++ ++G + ++I L+ + + G
Sbjct: 335 QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGN 394
Query: 402 LDQALNIIEEM 412
L A + + M
Sbjct: 395 LQDARRLFDRM 405
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 45/367 (12%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDV-CNSGGDLAYASLLFKQVKEPNVFLYNAM 83
E+L + H Q++K Q++ + + +ID+ GG ++ +F+++ EP++ L+N M
Sbjct: 254 EDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTM 313
Query: 84 IRAYTNNHLY-GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+ Y+ N + A+ ++QM G P+ + VI +C+ L PS GKQIH+
Sbjct: 314 VSGYSQNEEFLEDALECFRQM-----QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368
Query: 143 VCKFGLKSHSIT-ENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG-QMK 200
K + S+ I+ +NAL+ +Y KC L +A ++F+ M + + V+ N++I+GYA+ G +M
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEM- 427
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
E+L +F+ M I P I+ +SVL ACA
Sbjct: 428 -------------------------------ESLHLFQWMLERQIAPTSITFISVLSACA 456
Query: 261 QLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSW 318
G +E G + +M +K ++ + +I++ + G +++A L +M + W
Sbjct: 457 HTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGW 516
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
++++G HG A+ +++ +L+ P N ++ L + A G W E + R
Sbjct: 517 ASLLGACRTHGNIELAVKAANQVLQLE-PSNAAPYVVLSNMYASAGRWEE-VATVRKFMR 574
Query: 379 DHHIEHK 385
D ++ K
Sbjct: 575 DRGVKKK 581
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 22/314 (7%)
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
++K+C S GK +H+ K + + N + LY KC L A K F++++D +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+ ++N +I+ YA+ + A LFD++P +VS+ +IS Y G A AL +F M+
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 243 VGIEPDEISIVSVLPAC-------AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
+G++ D ++ +V+ AC QL S+ + Y N NAL+ Y
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVN---------NALLTYYG 184
Query: 296 KCGCINQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
K G ++ A ++F M RD VSW+++I H + KA+ LF EM R + + T
Sbjct: 185 KNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLA 244
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC-LVDLLGR-AGRLDQALNIIEEM 412
+L+A + GL + + + H+ H G L+DL + G + + EE+
Sbjct: 245 SVLTAFTCLEDLSGGLQFHGQLIKTGF--HQNSHVGSGLIDLYSKCGGGMSDCRKVFEEI 302
Query: 413 PMKPDAKIWGSLLS 426
+PD +W +++S
Sbjct: 303 -TEPDLVLWNTMVS 315
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 285/507 (56%), Gaps = 40/507 (7%)
Query: 18 VPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V ILQ+C N ++ + +H +K + ++D+ G L A L+F +
Sbjct: 2 VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV 61
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
V + ++I AY L AI L+ +M R+ + PD FT+ V+ +CA
Sbjct: 62 RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREG-----VSPDIFTITTVLHACACNGSLE 116
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK +H ++ + ++S+ NAL+D+Y KC
Sbjct: 117 NGKDVHNYIRENDMQSNIFVCNALMDMYAKC----------------------------- 147
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
G M+ A +F +MP I+SW MI GY+ EAL +F M ++ ++PD ++
Sbjct: 148 --GSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLAC 204
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
+LPACA L SL+ G+ +H + +N + NAL++MY+KCG A LFD + +D
Sbjct: 205 ILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKD 264
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+++W+ +I G HG + AI F+EM++ + P++++FI +L AC+H+G +EG +F+
Sbjct: 265 LITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFN 324
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
M+ + +++ K+EHY C+VDLL R+G+L A I+ MP++PDA IWG+LLS CR + ++
Sbjct: 325 VMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDV 384
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
++A EH+ LEPE+TG YVLL+N YA+ +WE+V ++R+ I + +KK PGCS IEV
Sbjct: 385 KLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEV 444
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLELL 521
++V F++G+ + P K I LL+ L
Sbjct: 445 KSKVHIFLAGNSSHPQAKKIEVLLKRL 471
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VS+L ACA G + LG +H K + +T CN L++MY KCG ++ A +FD M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
R VV+W+++I A G + +AI LFHEM R V P+ T +L ACA G G
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+ + R++ ++ I L+D+ + G ++ A ++ EMP+K D W +++
Sbjct: 121 VHNYI-RENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGG 174
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 269/475 (56%), Gaps = 23/475 (4%)
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
S G++ A +F + ++ +N +I Y AI +YK M + + PD
Sbjct: 128 SCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEG-----VKPDD 182
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
T+ ++ SCA L + GK+ + +V GL+ NAL+D++ KC ++ EA ++F+
Sbjct: 183 VTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDN 242
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
+ R IV+ LFD M +V W AMI G +AL +F
Sbjct: 243 LEKRTIVS------------------KLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALF 284
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
++MQ +PDEI+++ L AC+QLG+L++G WIH Y +K+ L + +L++MY KC
Sbjct: 285 QEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKC 344
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G I++A +F + R+ ++++ +IGGLA HG A AI F+EM + P++ITFIGLL
Sbjct: 345 GNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLL 404
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
SAC H G G YF MK ++ +++HY +VDLLGRAG L++A ++E MPM+ D
Sbjct: 405 SACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEAD 464
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
A +WG+LL CR + N+++ A + LL L+P D+G YVLL +Y + WED R R++
Sbjct: 465 AAVWGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRM 524
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVI 532
+ + ++K PGCS IEVN V EF+ D ++P + I+ L L H R+ V+
Sbjct: 525 MNERGVEKIPGCSSIEVNGIVSEFIVRDKSRPESEKIYDCLHCLGTHMGRSLSVL 579
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 189/378 (50%), Gaps = 49/378 (12%)
Query: 47 FLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML 104
F +++I C + L Y + K ++ PN F +N IR ++ + A+ YKQML
Sbjct: 11 FASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQML 70
Query: 105 RDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGK 164
R R PD FT P + K CA L SLG I HV K L+ S NA + ++
Sbjct: 71 R--RGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHNASIHMFAS 128
Query: 165 CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGY 224
C E+ A KVF+E RD+V+WN LI+GY ++G+ +K
Sbjct: 129 CGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEK----------------------- 165
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT 284
A++V++ M+ G++PD+++++ ++ +CA LG L G+ + Y N L
Sbjct: 166 --------AIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTI 217
Query: 285 VICNALIEMYIKCGCINQA-------------SQLFDQMVERDVVSWSTVIGGLANHGKA 331
+ NAL++M+ KCG I++A S+LFD M E+DVV W+ +IGG ++
Sbjct: 218 PLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRS 277
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
A+ LF EMQ P++IT I LSAC+ G + G+ +++ H + +
Sbjct: 278 QDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEK-HSLSLNVALGTS 336
Query: 392 LVDLLGRAGRLDQALNII 409
LVD+ + G + +AL +
Sbjct: 337 LVDMYAKCGNISEALCVF 354
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 4/200 (2%)
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGI---EPDEISIVSVLPACAQLGSLELGEWIH 272
SW I G++ + +A+ ++QM G PD + + CA L LG I
Sbjct: 45 SWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMIL 104
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ K L + + NA I M+ CG + A ++FD+ RD+VSW+ +I G G+
Sbjct: 105 GHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGE 164
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
KAI ++ M+ V P+D+T IGL+S+CA G N G +++ +K + + I L
Sbjct: 165 KAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKAN-GLRMTIPLANAL 223
Query: 393 VDLLGRAGRLDQALNIIEEM 412
+D+ + G + +A I + +
Sbjct: 224 MDMFSKCGDIHEARRIFDNL 243
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 278/470 (59%), Gaps = 7/470 (1%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
+I + G A+ F+++ + ++ +N+MI Y+ A+ ++ +ML +P
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPS--- 270
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
+ PD FTL ++ +CA L ++GKQIHA++ + ++ NAL+ +Y K + A
Sbjct: 271 -LKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329
Query: 172 HKVFE--EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+ E ++ +I+A+ +L+ GY +LG +K AR +F+K+ +V+WTAMI GY G
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGL 389
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+ +AL++FR M G EP+ ++ ++L + L LE G+ IH K + NA
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNA 449
Query: 290 LIEMYIKCGCINQASQLFD-QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
LI MY K G IN A ++FD ++++VSW+++I LA HG +AI+LF M + + P
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ IT++G+LSAC H G +G Y++ M H IE + HY C++DL GRAG L +A
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF 569
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
IE MP++PD WGSLL+SC+ + N ++A +A E LL+++P ++G Y+ L+N+Y+ G+W
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
E+ ++ RKL++ + ++K G S I + NEV F D P +I+ L+
Sbjct: 630 ENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLM 679
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 152/336 (45%), Gaps = 39/336 (11%)
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
P G+ +H + K GL N L+ Y K L AH VF+EM + +WN LISG
Sbjct: 26 PFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISG 85
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA+ G + +R L +MP VSWTA+I GY G + A+ +F +M + P + ++
Sbjct: 86 YAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTV 145
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+VL +CA +L++G IH + K L + +L+ MY KCG A +FD+M
Sbjct: 146 SNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTV 205
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLM 371
+++ +W+ +I G+ A F +M P DI ++ ++S + G+ E L+
Sbjct: 206 KNISTWNALISLYMQSGQFELAASQFEKM-----PDRDIVSWNSMISGYSQQGYNLEALV 260
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
F M + E +KPD S+LS+C
Sbjct: 261 IFSKM--------------------------------LNEPSLKPDNFTLASILSACANL 288
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNY-VLLSNIYAKHG 466
L I ++L E E +G L ++YAK G
Sbjct: 289 EKLNIGKQIHAYILRAETETSGAVGNALISMYAKSG 324
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 267/506 (52%), Gaps = 41/506 (8%)
Query: 21 LQSCENL---IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN- 76
L+SC L I + H QI K F+ T +I + G + A +F++
Sbjct: 47 LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRK 106
Query: 77 -VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
YNA++ Y +N A+ L++QM + + + TL +I +C + L
Sbjct: 107 LTVCYNALVSGYVSNSKCSDAVLLFRQMNEEG-----VPVNSVTLLGLIPACVSPINLEL 161
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G +H K+G D D+ N I+ Y +
Sbjct: 162 GSSLHCSTLKYGF-------------------------------DSDVSVVNCFITMYMK 190
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + A+ LFD+MP ++SW AM+SGY G L+++R M M G+ PD +++V V
Sbjct: 191 CGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGV 250
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L +CA LG+ +G + + + NALI MY +CG + +A +FD M ER +
Sbjct: 251 LSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTL 310
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSW+ +IGG HG A+ LF EM R + P+ F+ +LSAC+H G ++GL YF
Sbjct: 311 VSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKM 370
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
MKR++ +E EHY C+VDLLGRAGRL +A +IE MP+KPD +WG+LL +C+ + N+E
Sbjct: 371 MKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVE 430
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A +A E ++ LEPE+ G YVLLSNIY+ + V R+R +++ K +KK PGCS +E+
Sbjct: 431 LAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELK 490
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELL 521
V F+ GD +I+ +LE L
Sbjct: 491 GRVHPFIVGDRNHLQSDEIYRVLEEL 516
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 165/385 (42%), Gaps = 44/385 (11%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+P S NL +H LKY +V I + G + YA LF ++
Sbjct: 149 LIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKG 208
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +NAM+ Y N L + LY+ M + + PD TL V+ SCA L S+G
Sbjct: 209 LISWNAMVSGYAQNGLATNVLELYRNMDMNG-----VHPDPVTLVGVLSSCANLGAQSVG 263
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
++ + G S+ NAL+++Y +C L +A VF+ M +R +V+W +I GY
Sbjct: 264 HEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYG-- 321
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+ G+ I A+ +F++M GIEPD + V VL
Sbjct: 322 ------------------------MHGHGEI-----AVQLFKEMIRSGIEPDGTAFVCVL 352
Query: 257 PACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERD 314
AC+ G + G E+ M L + ++++ + G + +A L + M ++ D
Sbjct: 353 SACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPD 412
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
W ++G H A F + +++ P +I + LLS ++G++
Sbjct: 413 GAVWGALLGACKIHKNVELAELAFERV--IELEPENIGYYVLLSNIYSNANNSKGVLRIR 470
Query: 375 SMKRDHHIEHKIEHYGC-LVDLLGR 398
M ++ ++ + GC V+L GR
Sbjct: 471 IMMKEKKLK---KDPGCSYVELKGR 492
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
W + + +AL ++ QM G P+ + L +CA L LG H
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV--ERDVVSWSTVIGGLANHGKAHKA 334
K + + LI MY K ++ A ++F++ + V ++ ++ G ++ K A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLV 393
+ LF +M VP N +T +GL+ AC G ++ ++K + + + C +
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLK--YGFDSDVSVVNCFI 185
Query: 394 DLLGRAGRLDQALNIIEEMPMK 415
+ + G ++ A + +EMP+K
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVK 207
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 286/531 (53%), Gaps = 46/531 (8%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ IL++C ++ L ++IHTQ++K + ++ + +ID+ G L A ++ + +
Sbjct: 418 YPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT 477
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V + A+I Y ++L+ A+ +K+ML I D I +CAG+
Sbjct: 478 EDDVVSWTALISGYAQHNLFAEALKHFKEMLNRG-----IQSDNIGFSSAISACAGIQAL 532
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ G+QIHA G D+ N L+S Y
Sbjct: 533 NQGRQIHAQSYVSGY-------------------------------SEDLSIGNALVSLY 561
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR G++K+A + F+K+ +SW +ISG+ G +AL VF QM +E +
Sbjct: 562 ARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFG 621
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S + A A + +++ G+ IH K + NALI Y KCG I A + F +M E+
Sbjct: 622 SAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEK 681
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+ VSW+ +I G + HG ++A++LF +M+++ PN +TF+G+LSAC+H G +GL YF
Sbjct: 682 NDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYF 741
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM ++H + K HY C+VDL+ RAG L +A IEEMP++PDA IW +LLS+C + N
Sbjct: 742 ESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKN 801
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+ A +HLL LEPED+ YVLLSN+YA G+W+ + R+++R++ +KK PG S IE
Sbjct: 802 VEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIE 861
Query: 494 VNNEVQEFVSGDDTKPFLKDIF-WLLEL------LALHQDRAKDVIDIMYE 537
V N V F GD P I+ +L EL + QDR + D+ E
Sbjct: 862 VKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQE 912
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 191/422 (45%), Gaps = 59/422 (13%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L C + +++H + KY S ++ ++ + + + A +F +++
Sbjct: 216 FSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQ 275
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--GLL 131
+ +N++I A+ L+ +M RD + PD T+ ++ +CA G L
Sbjct: 276 SKDEVSFNSLISGLAQQGFSDGALELFTKMKRD-----YLKPDCVTVASLLSACASNGAL 330
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
C G+Q+H++V K G+ S I E ALLDLY C ++ AH++F ++V
Sbjct: 331 CK--GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVL------ 382
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
W M+ + + + +E+ +FRQMQ+ G+ P++ +
Sbjct: 383 -------------------------WNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFT 417
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
S+L C +G+L+LGE IH K +C+ LI+MY K G ++ A + +
Sbjct: 418 YPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT 477
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E DVVSW+ +I G A H +A+ F EM + ++I F +SACA N+G
Sbjct: 478 EDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQG-- 535
Query: 372 YFDSMKRDHHIEHKIEHYG-------CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
R H + + Y LV L R GR+ +A E++ K D+ W L
Sbjct: 536 ------RQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGL 588
Query: 425 LS 426
+S
Sbjct: 589 IS 590
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 216/492 (43%), Gaps = 80/492 (16%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
++ +L C N L+E KK+H +ILK + L K++DV + GDL +F+ +
Sbjct: 13 YIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMP 72
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG-LLC 132
+V ++ +I + + ++L+ M+ + + P + + V+++C+G +
Sbjct: 73 NRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEEN-----VSPTEISFASVLRACSGHRIG 127
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+QIHA + GL I N L+ LY K N LI
Sbjct: 128 IRYAEQIHARIICHGLLCSPIISNPLIGLYAK----------------------NGLII- 164
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
AR +FD + VSW AMISG++ G EA+ +F +M GI P
Sbjct: 165 --------SARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVF 216
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
SVL C ++ ++GE +H K T +CNAL+ +Y + A ++F +M
Sbjct: 217 SSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQS 276
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+D VS++++I GLA G + A+ LF +M+R + P+ +T LLSACA G +G
Sbjct: 277 KDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQ- 335
Query: 373 FDSMKRDHHIEHKIEHYGCLVDL-------------------------------LGRAGR 401
S I + G L+DL G+
Sbjct: 336 LHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDN 395
Query: 402 LDQALNIIEEMPMK---PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGN-YV- 456
L ++ I +M +K P+ + S+L +C + L++ H V++ N YV
Sbjct: 396 LSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLG--EQIHTQVIKTGFQFNVYVC 453
Query: 457 -LLSNIYAKHGR 467
+L ++YAKHG+
Sbjct: 454 SVLIDMYAKHGK 465
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 196/442 (44%), Gaps = 49/442 (11%)
Query: 9 SIKELEDRFVPILQSCEN----LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
++ E F +L++C + ++IH +I+ + L S + +I + G +
Sbjct: 106 NVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIIS 165
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A +F + + + AMI ++ N AI+L+ +M + I P + V+
Sbjct: 166 ARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEM-----HTAGIFPTPYVFSSVL 220
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
C + +G+Q+HA V K+G + NAL+ LY + + A KVF +M +D V
Sbjct: 221 SGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEV 280
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
++N+LISG A+ G AL++F +M+
Sbjct: 281 SFNSLISGLAQQGFSDG-------------------------------ALELFTKMKRDY 309
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
++PD +++ S+L ACA G+L GE +H Y K + ++ AL+++Y+ C I A
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++F +VV W+ ++ ++ +F +MQ + PN T+ +L C G
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVG 429
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGC--LVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
+ G + + + Y C L+D+ + G+LD A ++I + D W
Sbjct: 430 ALDLGEQIHTQVIK---TGFQFNVYVCSVLIDMYAKHGKLDTA-HVILRTLTEDDVVSWT 485
Query: 423 SLLSSCRTYSNLEIAVIAMEHL 444
+L+S Y+ + A++H
Sbjct: 486 ALISG---YAQHNLFAEALKHF 504
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ GI + + + +L C GSL + +H K +V+CN L+++Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++ ++F+ M R V SW +I G +++ + LF M V P +I+F +L A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 360 CA 361
C+
Sbjct: 121 CS 122
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/377 (41%), Positives = 244/377 (64%), Gaps = 2/377 (0%)
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+++ A ++F+ M ++ +V+ +++ YA+ G++ AR+LFD M V W MI GYT
Sbjct: 108 DVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQ 167
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
G EAL +FR+M +P+E++++SVL AC QLG+LE G W+H Y + N + +
Sbjct: 168 NGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHV 227
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
AL++MY KCG + A +FD++ ++DVV+W+++I G A HG + +A+ LF M R+ +
Sbjct: 228 GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGL 287
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
P +ITFIG+LSAC H+G+ EG F+ MK ++ IE KIEHYGC+V+LLGRAG ++QA
Sbjct: 288 HPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 347
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
+++ M ++PD +WG+LL +CR + + + +E L+ ++G Y+LLSNIYA G
Sbjct: 348 ELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVG 407
Query: 467 RWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA--LH 524
W+ V+R+R +++ +KK PGCS IEVNN+V EF++G P K+I+ +LE + L
Sbjct: 408 NWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLK 467
Query: 525 QDRAKDVIDIMYEDIGE 541
DI+ DIGE
Sbjct: 468 SHGYTPQTDIVLHDIGE 484
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 167/357 (46%), Gaps = 54/357 (15%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
Q+ + +S +T M+ G+L A +LF ++E + +N MI YT N +
Sbjct: 114 QLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNE 173
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
A+ L+++ML+ P++ T+ V+ +C L G+ +H+++ G++ +
Sbjct: 174 ALVLFRRMLKAKAK-----PNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVG 228
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP----Y 211
AL+D+Y KC L +A VF+++ D+D+VAWN++I GYA G ++A LF M +
Sbjct: 229 TALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLH 288
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEPDEISIVSVLPACAQLGSLELGEW 270
T +++ ++S H G E D+F +M+ GIEP +E
Sbjct: 289 PTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEP----------------KIE---- 328
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHG 329
H C ++ + + G + QA +L M +E D V W T++G HG
Sbjct: 329 -HYGC--------------MVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 373
Query: 330 KAHKAIHLFHEMQRLKVP---PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
K I L ++ L V N T+I L + A G W +G+ +M +D ++
Sbjct: 374 K----IALGEKIVELLVDQNLANSGTYILLSNIYAAVGNW-DGVARLRTMMKDSGVK 425
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/460 (38%), Positives = 262/460 (56%), Gaps = 42/460 (9%)
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL-PDKFTLPF 122
+ASL Q + PN + + + NN + AI +P S L P
Sbjct: 27 FASLSL-QYQSPNPS-FTSSAPQFDNNQTHLKAI----PSCSNPHAESTCLTPTYSNYAS 80
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
+++SC GKQ+HA VC G ++ L++LY CD L
Sbjct: 81 LLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL-------------- 126
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
AR+LFD++P I W +I GY G Y A+ ++ QM
Sbjct: 127 -----------------SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFD 169
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
G+ PD + VL ACA L ++E G IH + + + + ALI+MY KCGC+
Sbjct: 170 YGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGS 229
Query: 303 ASQLFDQMVERD---VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
A ++FD+++ RD VVSW+ +I G A HG A +A+ LF EM R+ P+ ITF+G+LSA
Sbjct: 230 AREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSA 288
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H G EG M+F++M RD+ I+ ++HY C+VDLLG +GRLD+A N+I +M + PD+
Sbjct: 289 CSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSG 348
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
+WG+LL+SC+ ++N+E+ IA+E L+ LEP+D GNYV+LSNIYA+ G+WE V+++RKL+
Sbjct: 349 VWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMT 408
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
+ +KK+ CS IEV N+V F+SGD + P +I+ LE
Sbjct: 409 DRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELE 448
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 183/383 (47%), Gaps = 57/383 (14%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMID---VCNSGGDLAYASLLFK 70
+ +LQSC + + K++H Q+ + TK+++ VC+S L+ A LLF
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDS---LSSARLLFD 134
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + N+FL+N +IR Y N Y A+ LY QM ++PD FT PFV+K+CA L
Sbjct: 135 RIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF-----DYGLVPDNFTFPFVLKACAAL 189
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD---IVAWN 187
G++IH HV + G + AL+D+Y KC + A +VF+++ RD +V+WN
Sbjct: 190 SAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWN 249
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+I+GYA G EALD+F +M V +P
Sbjct: 250 AMITGYAMHGHA-------------------------------TEALDLFEEMNRVA-KP 277
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGCINQASQL 306
D I+ V VL AC+ G LE G +++ + TV ++++ G +++A L
Sbjct: 278 DHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNL 337
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH-EMQRL-KVPPNDI-TFIGLLSACAHT 363
QM V+ S V G L N K H + L ++RL ++ P+D ++ L + A
Sbjct: 338 IMQM---KVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQA 394
Query: 364 GFWNEGLMYFDSMKRDHHIEHKI 386
G W EG+ + D ++ I
Sbjct: 395 GKW-EGVAKLRKLMTDRRLKKSI 416
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/485 (37%), Positives = 272/485 (56%), Gaps = 42/485 (8%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD++YA LF ++ +P FL+N +++ Y N + A+++Y +M + PD FT
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLG-----VRPDPFT 137
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
PFVIK+CA L G +H HV K GL+ + L+ +Y K EL A +F M
Sbjct: 138 FPFVIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMV 197
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+RD+VAWN A+I+ G ++AL FR+
Sbjct: 198 ERDLVAWN-------------------------------ALIAVCVQTGFSSKALQSFRE 226
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M M GI+PD ++IVS L AC LG LE GE I+ + + + ++ NA ++M KCG
Sbjct: 227 MGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGD 286
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+++A LFD+M +R+V+SWSTVIGG A +G++ KA+ LF M+ V PN +TF+ +LSA
Sbjct: 287 MDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSA 346
Query: 360 CAHTGFWNEGLMYFDSMKR--DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
C+HTG NEG YF+ M + D +I+ + EHY C+VDLLGR+G L++A N I+ MP++ D
Sbjct: 347 CSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEAD 406
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
IWG+LL +C + N+++ + L L PE +VLLSN+YA GRW V ++R+
Sbjct: 407 PGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEKVRQR 466
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVI---DI 534
++ K +K S +E N E+ GD + P I LE L L Q ++ I D
Sbjct: 467 MKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDL-LKQMKSMGYIPETDS 525
Query: 535 MYEDI 539
++ D+
Sbjct: 526 VFHDV 530
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 45/320 (14%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++++C L EL +H ++K+ L + T+++ + G+L A LF +
Sbjct: 138 FPFVIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMV 197
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E ++ +NA+I A+ +++M + I PD T+ + +C L C
Sbjct: 198 ERDLVAWNALIAVCVQTGFSSKALQSFREM-----GMAGIKPDSVTIVSALSACGHLGCL 252
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G++I+ + G+ S+ I NA LD+ KC ++ +A +F+EM R++++W+ +I GY
Sbjct: 253 ETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGY 312
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G+ +KA LF + M+ G++P+ ++ +
Sbjct: 313 AVNGESEKALALFSR-------------------------------MKNQGVQPNYVTFL 341
Query: 254 SVLPACAQLGSLELGEWIHM----YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
+VL AC+ G + G W + D ++ R ++++ + G + +A
Sbjct: 342 AVLSACSHTGRVNEG-WQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKI 400
Query: 310 M-VERDVVSWSTVIGGLANH 328
M +E D W ++G A H
Sbjct: 401 MPIEADPGIWGALLGACAIH 420
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 284/521 (54%), Gaps = 31/521 (5%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM------ 103
T M+ G + A +LF Q+ EPNV +NAMI Y N + A +L+ +M
Sbjct: 325 TSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTI 384
Query: 104 ---------LRDPRTGSLILP-----------DKFTLPFVIKSCAGLLCPSLGKQIHAHV 143
R+ R+ ++ +L +C+ + GKQ+H+
Sbjct: 385 SWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLA 444
Query: 144 CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKAR 203
K G + +S NAL+ LYGK + ++F+ MT +D V++N+ +S + +AR
Sbjct: 445 VKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEAR 504
Query: 204 MLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLG 263
+F+ MP +VSWT +IS EA+++FR M P+ + +L LG
Sbjct: 505 DVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLG 564
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
+ +LG+ IH K + V+ NAL+ MY KC + + ++FD M ERD+ +W+T+I
Sbjct: 565 APQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNTIIT 623
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
G A HG +AI ++ M V PN++TF+GLL AC+H+G +EG +F SM D+ +
Sbjct: 624 GYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLT 683
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+EHY C+VDLLGRAG + A + I +MP++PD+ IW +LL +C+ + N+EI A E
Sbjct: 684 PLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEK 743
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVS 503
L +EP + GNYV+LSNIY+ G W++V+++RKL++ + + K PGCS +++ N++ FV+
Sbjct: 744 LFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVT 803
Query: 504 GDDTKPFLKDIF---WLLELLALHQDRAKDVIDIMYEDIGE 541
GD+ +++I+ W L L D D + DI E
Sbjct: 804 GDEEHEQIQNIYATLWELYTLLKATGYVPDT-DFVLHDIDE 843
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 183/387 (47%), Gaps = 26/387 (6%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLR-DPRTGSLILPDKF 118
G L A +F + ++ +N+MI AY NN + +L + + RTG+++L
Sbjct: 47 GRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILL---- 102
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+G + G++ +++ NA++ Y + ++ A K+F+ M
Sbjct: 103 ---------SGYARAGRVRDARRVFDGMGVR-NTVAWNAMVTCYVQNGDITLARKLFDAM 152
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
RD+ +WN +++GY M++AR LF++MP VSWT MISGY I + A D+FR
Sbjct: 153 PSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFR 212
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK-C 297
M G+ P++ ++VSVL A LG + E IH+ K R V+ A++ Y K
Sbjct: 213 TMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDV 272
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
++ A + F+ M R+ +WST+I L+ G+ A ++ VP + +L
Sbjct: 273 NMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SRTSML 328
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
+ A G ++ + FD + E + + ++ + +D+A ++ MP + +
Sbjct: 329 TGLARYGRIDDAKILFDQIH-----EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-N 382
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHL 444
W +++ E A+++++ L
Sbjct: 383 TISWAGMIAGYARNGRSEQALVSLQAL 409
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 281/534 (52%), Gaps = 68/534 (12%)
Query: 20 ILQSCENLIELK-KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVF 78
IL S + + L ++H ++K+ F+ + ++D+ + G + A F ++ E NV
Sbjct: 150 ILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVV 209
Query: 79 LYN-------------------------------AMIRAYTNNHLYGLAINLYKQMLRDP 107
+YN AMI +T N L AI+L+++M
Sbjct: 210 MYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREM---- 265
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
R +L + D++T V+ +C G++ GKQ+HA++ + + + +AL+D+Y KC
Sbjct: 266 RLENLEM-DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKS 324
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+ K A +F KM +VSWTAM+ GY
Sbjct: 325 I-------------------------------KSAETVFRKMNCKNVVSWTAMLVGYGQN 353
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
G EA+ +F MQ GIEPD+ ++ SV+ +CA L SLE G H + L+ +
Sbjct: 354 GYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVS 413
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
NAL+ +Y KCG I + +LF +M D VSW+ ++ G A GKA++ + LF M
Sbjct: 414 NALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFK 473
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+ +TFIG+LSAC+ G +G F+SM ++H I +HY C++DL RAGRL++A
Sbjct: 474 PDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARK 533
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
I +MP PDA W SLLSSCR + N+EI A E LL LEP +T +Y+LLS+IYA G+
Sbjct: 534 FINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGK 593
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
WE+V+ +RK +R K ++K PGCS I+ N+V F + D + PF I+ LE L
Sbjct: 594 WEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKL 647
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 255/532 (47%), Gaps = 76/532 (14%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
L + + +L+ C + KKIH I+K + FL+ ++ + YA +F Q+
Sbjct: 14 LSNHYCELLKHCR---DTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQM 70
Query: 73 KEPNVFLYNAMIRAYT-----------------------NNHLYGLAINLYKQMLRDPRT 109
+ N++ +N ++ +Y+ N+ + A + +L+ +
Sbjct: 71 PQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGF--LLQSVKA 128
Query: 110 GSLILPD-KFTLPFVIKSCAGLL-----CPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
+L+L + F L + S +L C LG Q+H HV KFG +S+ + L+D+Y
Sbjct: 129 YNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYS 188
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
K + A + F+EM ++++V +N LI+G R +++ +R LF M +SWTAMI+G
Sbjct: 189 KTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAG 248
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
+T G EA+D+FR+M++ +E D+ + SVL AC + +L+ G+ +H Y +
Sbjct: 249 FTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDN 308
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+ +AL++MY KC I A +F +M ++VVSW+ ++ G +G + +A+ +F +MQ
Sbjct: 309 IFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQN 368
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYF-------------------------DSMKR 378
+ P+D T ++S+CA+ EG + S++
Sbjct: 369 NGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIED 428
Query: 379 DHHIEHKIEH-----YGCLVDLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRT 430
H + ++ + + LV + G+ ++ L + E M KPD + +LS+C
Sbjct: 429 SHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSR 488
Query: 431 YSNLEIAVIAMEHLL----VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
++ E ++ ++ ED +Y + +++++ GR E+ RK I
Sbjct: 489 AGLVQKGNQIFESMIKEHRIIPIED--HYTCMIDLFSRAGRLEEA---RKFI 535
>gi|449480383|ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 561
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 187/552 (33%), Positives = 289/552 (52%), Gaps = 82/552 (14%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
S ++L ++ + L C NL ++K++H QILK L F+V K+I + + A+
Sbjct: 40 FSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATN 99
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
F QV+ PNV LYN MIRA+++N A + M RD D FT PF++K C
Sbjct: 100 AFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYA-----DNFTFPFLLKVC 154
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE--LIEAHKVFEEM-TDRDIV 184
G + + + +HA + KFG S N+L+D Y KC + A K+F M RD+V
Sbjct: 155 TGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVV 214
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+WN++ISG A+ G ++AR +FD+MP +SW M+ GY +G +A +F +M
Sbjct: 215 SWNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEM---- 270
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
P+ R V + ++ Y K G + A
Sbjct: 271 --PE---------------------------------RNVVSWSTMVLGYCKAGDMEMAR 295
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
LFD+M +++VSW+ ++ G A G A +AI LF +M++ + ++ T + +L+ACA +G
Sbjct: 296 MLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESG 355
Query: 365 FW-----------------------------------NEGLMYFDSMKRDHHIEHKIEHY 389
++G+ YF +M+RD+ + ++EHY
Sbjct: 356 LLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGLIDDGIRYFSTMERDYTLVPEVEHY 415
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
GC+VDLLGR GRL++A+ +I MPM P+A IWG+LL +CR ++ +E+A ++HL+ LEP
Sbjct: 416 GCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEP 475
Query: 450 EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
D+GN+ +LSNIYA G W V+ R +RS KK G S IEVNNEV EF D + P
Sbjct: 476 TDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHEFTVFDRSHP 535
Query: 510 FLKDIFWLLELL 521
+I+ ++ L
Sbjct: 536 KSDNIYQVINGL 547
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 290/521 (55%), Gaps = 48/521 (9%)
Query: 11 KELEDRFVPILQSCENLIELKKIHTQILKYLLSQSN--FLVTKMIDVCNSGGDLAYASLL 68
K + RF+ +L C +L +LK+IH Q ++ + ++ FL ++++ V +S D YA +
Sbjct: 22 KTHQSRFLHLLTDCTDLSKLKQIHAQAIRNFSTHNSSLFLYSRILHV-SSLIDFDYACRV 80
Query: 69 FKQVKEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
F Q+ PN F++N +I A + AI ++ +ML + GS + PDK T PF++K+C
Sbjct: 81 FNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEE---GS-VEPDKHTFPFLLKAC 136
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
A + S G+Q HA + K GL D D+ N
Sbjct: 137 AYVFALSEGRQAHAQIFKLGL-------------------------------DLDVYVGN 165
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+LI YA G + A +F+KMP ++VSW MI Y G + AL +F +MQ EP
Sbjct: 166 SLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQN-SFEP 224
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDK---NHLLRRTVICNALIEMYIKCGCINQAS 304
D ++ S++ ACA +G+L LG W H Y + + +I ++L++MY KCG + A
Sbjct: 225 DGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQ 284
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLLSACAHT 363
Q+F+ M + D+ SW+++I LA HG+ A+ F + + K PN +TF+G+LSAC H
Sbjct: 285 QVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHG 344
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G +G YFD M D+ IE ++EHYGCLVDLL R+G +D+AL ++ M +KPDA IW S
Sbjct: 345 GMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRS 404
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDT---GNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
LL +C N + + +L+ E T G YV+LS +YA +W DV +RK++
Sbjct: 405 LLDACYK-QNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTD 463
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+ K PGCS IE++ EF +GD + P +K+I+ +++L+
Sbjct: 464 MGVTKEPGCSSIEIDGISHEFFAGDTSHPRIKEIYGVIDLI 504
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 175/459 (38%), Positives = 265/459 (57%), Gaps = 39/459 (8%)
Query: 62 LAYA-SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
L YA ++L + P+ F N ++R + ++ +A+ L+++ L P D T
Sbjct: 74 LRYAVAVLSGLLPSPDPFSLNTVLRIFASSARPRVALALHRRHLAPP--------DTHTY 125
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
P ++++CA LL G+ +HA CK GL S +N+L+ LYG C AH+VF+E+
Sbjct: 126 PPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPP 185
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
P +VSW ++++G+ G E L VFR+M
Sbjct: 186 -----------------------------PERNLVSWNSVLNGFAANGRPNEVLTVFREM 216
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
V PD ++VSVL ACA++G L LG +H++ K L+ NALI++Y KCG +
Sbjct: 217 LEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGV 276
Query: 301 NQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ A ++F +M V R VVSW+++I GLA +G A+ LF M+R K+ P +IT +G+L A
Sbjct: 277 DDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYA 336
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H G ++G YFD MK ++ I +IEH GC+VDLLGRAGR+++A N I MP++P+A
Sbjct: 337 CSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAV 396
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
+W +LL +C + LEI A L+ L+P +G+YVLLSN+YA GRW DV +RK +
Sbjct: 397 VWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMV 456
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+ ++K PG SL+E+ N V EFV GD + P I+ +L
Sbjct: 457 THGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEML 495
>gi|242059647|ref|XP_002458969.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
gi|241930944|gb|EES04089.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
Length = 530
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 221/341 (64%)
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
++ NA++ LY +L+ A +VF+EM RD +W+ LI+GY + G ++ AR LFDKMP
Sbjct: 181 VSWNAMVVLYVSAGDLVSARRVFDEMPTRDTASWSVLIAGYCKGGLVQNARELFDKMPSK 240
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
+V+ TAMI+GY G AL +FR ++ GIEPD ++V V+ A +Q+GS EL W+
Sbjct: 241 NLVARTAMINGYAQTGQPKAALALFRDLEAAGIEPDGATMVGVISAVSQIGSTELAGWVG 300
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
Y D+ + R + AL++M+ KCG I QA F ++ + D ++ +I GLA HG
Sbjct: 301 AYVDRKKIERNVKVLTALVDMHAKCGNIEQALSAFREIPQPDAYPYTALISGLATHGHEK 360
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
A+ +F MQ V P+ ITF+G+L+AC+HTG ++GL Y+++M RD+ I + +HY C+
Sbjct: 361 LALSVFERMQVQAVKPDPITFVGVLTACSHTGLVDKGLEYWEAMVRDYGIVRRADHYACV 420
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
+D+LGRAGR+++A +++ MPM P G+LLS+C+TY N+EIA I L LEP +T
Sbjct: 421 IDMLGRAGRIEEAFEMVQTMPMGPHPGALGALLSACKTYENVEIAEIVANKLFELEPWNT 480
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
GNY+LLSNIYA WE+ R+R L+R+K K PG + E
Sbjct: 481 GNYILLSNIYAGKELWEEAERVRSLMRTKLPFKNPGSTWFE 521
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 39/254 (15%)
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
GG + A LF ++ N+ AMI Y A+ L++ + + I PD
Sbjct: 224 GGLVQNARELFDKMPSKNLVARTAMINGYAQTGQPKAALALFRDL-----EAAGIEPDGA 278
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
T+ VI + + + L + A+V + ++ + AL+D++ KC + +A F E+
Sbjct: 279 TMVGVISAVSQIGSTELAGWVGAYVDRKKIERNVKVLTALVDMHAKCGNIEQALSAFREI 338
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
D + LISG A G K AL VF
Sbjct: 339 PQPDAYPYTALISGLATHGHEKL-------------------------------ALSVFE 367
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELG--EWIHMYCDKNHLLRRTVICNALIEMYIK 296
+MQ+ ++PD I+ V VL AC+ G ++ G W M D ++RR +I+M +
Sbjct: 368 RMQVQAVKPDPITFVGVLTACSHTGLVDKGLEYWEAMVRDYG-IVRRADHYACVIDMLGR 426
Query: 297 CGCINQASQLFDQM 310
G I +A ++ M
Sbjct: 427 AGRIEEAFEMVQTM 440
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 48 LVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDP 107
++T ++D+ G++ A F+++ +P+ + Y A+I + LA++++++M
Sbjct: 314 VLTALVDMHAKCGNIEQALSAFREIPQPDAYPYTALISGLATHGHEKLALSVFERM---- 369
Query: 108 RTGSLILPDKFTLPFVIKSCA--GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
+ PD T V+ +C+ GL+ L + A V +G+ + ++D+ G+
Sbjct: 370 -QVQAVKPDPITFVGVLTACSHTGLVDKGL-EYWEAMVRDYGIVRRADHYACVIDMLGRA 427
Query: 166 DELIEAHKVFEEM 178
+ EA ++ + M
Sbjct: 428 GRIEEAFEMVQTM 440
>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 166/456 (36%), Positives = 263/456 (57%), Gaps = 5/456 (1%)
Query: 35 TQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYG 94
+I+ ++ F ++ +I + G + A +F +P L+N++I Y +N
Sbjct: 224 ARIVSFVRDVDEFSLSALISGYANAGRMREARSVFDSKVDPCAVLWNSIISGYVSNGEEV 283
Query: 95 LAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSIT 154
A+NL+ MLR+ G D + ++ + +GLL L KQ+H + CK G+ +
Sbjct: 284 EAVNLFSAMLRNGVQG-----DASAVANILSAASGLLVVELVKQMHVYACKAGVTHDIVV 338
Query: 155 ENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI 214
++LLD Y KC EA K+F E+ + D + N +I+ Y+ G+++ A+++F+ MP T+
Sbjct: 339 ASSLLDAYSKCQSPCEACKLFSELKEYDTILLNTMITVYSNCGRIEDAKLIFNTMPSKTL 398
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
+SW +++ G T +EAL++F QM + ++ D S SV+ ACA SLELGE +
Sbjct: 399 ISWNSILVGLTQNACPSEALNIFSQMNKLDLKMDRFSFASVISACACRSSLELGEQVFGK 458
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
L +I +L++ Y KCG + ++FD MV+ D VSW+T++ G A +G +A
Sbjct: 459 AITIGLESDQIISTSLVDFYCKCGFVEIGRKVFDGMVKTDEVSWNTMLMGYATNGYGIEA 518
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVD 394
+ LF EM V P+ ITF G+LSAC H+G EG F +MK ++I IEH+ C+VD
Sbjct: 519 LTLFCEMTYGGVWPSAITFTGVLSACDHSGLVEEGRNLFHTMKHSYNINPGIEHFSCMVD 578
Query: 395 LLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGN 454
L RAG ++A+++IEEMP + DA +W S+L C + N I +A E ++ LEPE+TG
Sbjct: 579 LFARAGYFEEAMDLIEEMPFQADANMWLSVLRGCIAHGNKTIGKMAAEQIIQLEPENTGA 638
Query: 455 YVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
Y+ LSNI A G WE + +R+L+R K +K PGCS
Sbjct: 639 YIQLSNILASSGDWEGSALVRELMRDKHFQKIPGCS 674
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 200/420 (47%), Gaps = 47/420 (11%)
Query: 44 QSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM 103
+++F ++ G L A LF + N ++N++I +Y+ + G A+ L+K M
Sbjct: 96 KTHFSWNMVVSAFAKSGHLQLAHSLFNAMPSKNHLVWNSIIHSYSRHGHPGKALFLFKSM 155
Query: 104 LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC--KFGLKSHSITENALLDL 161
DP ++ D F L + +CA L + GKQ+HA V GL+ + ++L++L
Sbjct: 156 NLDPS--QIVYRDAFVLATALGACADSLALNCGKQVHARVFVDGMGLELDRVLCSSLINL 213
Query: 162 YGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
YGKC +L A ++ + D D + + LISGYA G+M++AR +FD V W ++I
Sbjct: 214 YGKCGDLDSAARIVSFVRDVDEFSLSALISGYANAGRMREARSVFDSKVDPCAVLWNSII 273
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY------- 274
SGY G EA+++F M G++ D ++ ++L A + L +EL + +H+Y
Sbjct: 274 SGYVSNGEEVEAVNLFSAMLRNGVQGDASAVANILSAASGLLVVELVKQMHVYACKAGVT 333
Query: 275 -------------------CDKNHLLRR-----TVICNALIEMYIKCGCINQASQLFDQM 310
C+ L T++ N +I +Y CG I A +F+ M
Sbjct: 334 HDIVVASSLLDAYSKCQSPCEACKLFSELKEYDTILLNTMITVYSNCGRIEDAKLIFNTM 393
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
+ ++SW++++ GL + +A+++F +M +L + + +F ++SACA G
Sbjct: 394 PSKTLISWNSILVGLTQNACPSEALNIFSQMNKLDLKMDRFSFASVISACACRSSLELGE 453
Query: 371 MYFD-----SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
F ++ D I LVD + G ++ + + M +K D W ++L
Sbjct: 454 QVFGKAITIGLESDQIISTS------LVDFYCKCGFVEIGRKVFDGM-VKTDEVSWNTML 506
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 131/284 (46%), Gaps = 47/284 (16%)
Query: 136 GKQIHAHVCKFGLKSHSIT-ENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL----- 189
G+Q+H K G+ + S+ N LL LY +C L +A +F+EM + +WN L
Sbjct: 19 GRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQTNSFSWNTLVQAHL 78
Query: 190 --------------------------ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
+S +A+ G ++ A LF+ MP + W ++I
Sbjct: 79 NSGHTHSALHLFNAMPHKTHFSWNMVVSAFAKSGHLQLAHSLFNAMPSKNHLVWNSIIHS 138
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEI------SIVSVLPACAQLGSLELGEWIH--MYC 275
Y+ G +AL +F+ M + +P +I + + L ACA +L G+ +H ++
Sbjct: 139 YSRHGHPGKALFLFKSMNL---DPSQIVYRDAFVLATALGACADSLALNCGKQVHARVFV 195
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
D L V+C++LI +Y KCG ++ A+++ + + D S S +I G AN G+ +A
Sbjct: 196 DGMGLELDRVLCSSLINLYGKCGDLDSAARIVSFVRDVDEFSLSALISGYANAGRMREAR 255
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+F KV P + + ++S G E + F +M R+
Sbjct: 256 SVFDS----KVDPCAVLWNSIISGYVSNGEEVEAVNLFSAMLRN 295
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 161/393 (40%), Gaps = 83/393 (21%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT- 88
+K++H K ++ + + ++D + A LF ++KE + L N MI Y+
Sbjct: 320 VKQMHVYACKAGVTHDIVVASSLLDAYSKCQSPCEACKLFSELKEYDTILLNTMITVYSN 379
Query: 89 ----------------------NNHLYGL--------AINLYKQMLR-DPRTGSLILPDK 117
N+ L GL A+N++ QM + D + D+
Sbjct: 380 CGRIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALNIFSQMNKLDLKM------DR 433
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
F+ VI +CA LG+Q+ GL+S I +L+D Y KC + KVF+
Sbjct: 434 FSFASVISACACRSSLELGEQVFGKAITIGLESDQIISTSLVDFYCKCGFVEIGRKVFDG 493
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEA 233
M D V+WN ++ GYA G +A LF +M Y + +++T ++S H G E
Sbjct: 494 MVKTDEVSWNTMLMGYATNGYGIEALTLFCEMTYGGVWPSAITFTGVLSACDHSGLVEEG 553
Query: 234 LDVFRQMQ-MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
++F M+ I P +E H C +++
Sbjct: 554 RNLFHTMKHSYNINP----------------GIE-----HFSC--------------MVD 578
Query: 293 MYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV-PPND 350
++ + G +A L ++M + D W +V+ G HG +K I Q +++ P N
Sbjct: 579 LFARAGYFEEAMDLIEEMPFQADANMWLSVLRGCIAHG--NKTIGKMAAEQIIQLEPENT 636
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
+I L + A +G W EG + RD H +
Sbjct: 637 GAYIQLSNILASSGDW-EGSALVRELMRDKHFQ 668
>gi|218192417|gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
Length = 614
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 239/393 (60%), Gaps = 38/393 (9%)
Query: 161 LYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG----------------------- 197
+Y +C +A+++FEEM RD+V+WN +ISG+A G
Sbjct: 1 MYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAG 60
Query: 198 -------QMKKARM--------LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
M KAR+ +FD+M +T ++SW AM++ YT+ + EA+++F +MQ
Sbjct: 61 TMASILPSMGKARVEDIALLKGVFDEMRFTGLISWNAMLAVYTNNEMHVEAVELFMRMQK 120
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
GIEPD +++ +VLP+C ++ +L LG+ IH + + ++ NAL++MY CGC+ +
Sbjct: 121 DGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKE 180
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
A +FD M RDVVSW+++I HG +AI LF +M + P+ I F+ +L+AC+H
Sbjct: 181 ARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSH 240
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G + G YF SM + HI K+EHY C+VDLLGRAG + +A + I MP+KP+ ++WG
Sbjct: 241 AGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWG 300
Query: 423 SLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
+LL +CR +SN++I ++A + LL L P+ TG YVLLSNIYA+ GRW DVS +R ++ SK
Sbjct: 301 ALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKG 360
Query: 483 MKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
+KK PG S E+ + V F GD + P K I+
Sbjct: 361 IKKLPGVSNAELGDSVHTFHIGDTSHPQSKMIY 393
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 149/311 (47%), Gaps = 41/311 (13%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
D+A +F +++ + +NAM+ YTNN ++ A+ L+ +M +D I PD TL
Sbjct: 76 DIALLKGVFDEMRFTGLISWNAMLAVYTNNEMHVEAVELFMRMQKDG-----IEPDAVTL 130
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
V+ SC + SLGK+IH + + + S + ENAL+D+Y C L EA VF+ M
Sbjct: 131 ATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGT 190
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+V+W ++IS Y R G ++A +D+F +M
Sbjct: 191 RDVVSWTSIISAYGRHGHGREA-------------------------------IDLFEKM 219
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGE-WIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
G+EPD I+ V++L AC+ G L++G+ + + + H+ + ++++ + GC
Sbjct: 220 CGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGC 279
Query: 300 INQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I +A M ++ + W ++G H ++ I L L++ P + LLS
Sbjct: 280 IREAYDFIMVMPIKPNERVWGALLGACRIH--SNMDIGLLAADSLLRLAPKQTGYYVLLS 337
Query: 359 AC-AHTGFWNE 368
A G W +
Sbjct: 338 NIYARAGRWAD 348
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 257/468 (54%), Gaps = 44/468 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GDL+ A LF + +VF + AM+ Y N + A + +M P K
Sbjct: 246 GDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEM-----------PVK-- 292
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ I+ NA+L Y + +++ A ++FE M
Sbjct: 293 -------------------------------NEISYNAMLAGYVQYKKMVIAGELFEAMP 321
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
R+I +WN +I+GY + G + +AR LFD MP VSW A+ISGY G Y EAL++F +
Sbjct: 322 CRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVE 381
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ G + + L CA + +LELG+ +H K + NAL+ MY KCG
Sbjct: 382 MKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGS 441
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++A+ +F+ + E+DVVSW+T+I G A HG +A+ LF M++ V P++IT +G+LSA
Sbjct: 442 TDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSA 501
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H+G + G YF SM RD++++ +HY C++DLLGRAGRL++A N++ MP P A
Sbjct: 502 CSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAA 561
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
WG+LL + R + N E+ A E + +EP+++G YVLLSN+YA GRW DV +MR +R
Sbjct: 562 SWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMR 621
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
++K G S +EV N++ F GD P I+ LE L L R
Sbjct: 622 EAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRR 669
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 142/528 (26%), Positives = 229/528 (43%), Gaps = 77/528 (14%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
++ + +S+ MI + A LF ++ E ++F +N M+ Y N G
Sbjct: 67 RVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGE 126
Query: 96 AINLYKQM-LRDPRTGSLILPDKFTLPFVIK--------------SCAGLLCPSL--GKQ 138
A L+ M +D + + +L FV + S GLL + G+
Sbjct: 127 AHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRL 186
Query: 139 IHAHVCKFGLKSHS----ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
A +S S I+ N L+ Y K + L +A ++F+ M RD+++WN +ISGYA
Sbjct: 187 KEARRL---FESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYA 243
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
++G + +A+ LF++ P + +WTAM+SGY G EA F +M + +EIS +
Sbjct: 244 QVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPV----KNEISYNA 299
Query: 255 VLPACAQLGSLEL-GEWIH-MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+L Q + + GE M C R N +I Y + G I QA +LFD M +
Sbjct: 300 MLAGYVQYKKMVIAGELFEAMPC------RNISSWNTMITGYGQNGGIAQARKLFDMMPQ 353
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA----------- 361
RD VSW+ +I G A +G +A+++F EM+R N TF LS CA
Sbjct: 354 RDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQV 413
Query: 362 ---------HTG-FWNEGL--MYFDSMKRDHH------IEHK-IEHYGCLVDLLGRAGRL 402
TG F L MYF D IE K + + ++ R G
Sbjct: 414 HGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFG 473
Query: 403 DQALNIIEEMP---MKPDAKIWGSLLSSCRTYSNLEIAV---IAMEHLLVLEPEDTGNYV 456
QAL + E M +KPD +LS+C ++ +M+ ++P + +Y
Sbjct: 474 RQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPT-SKHYT 532
Query: 457 LLSNIYAKHGRWEDVSRMRKLI----RSKSMKKTPGCSLIEVNNEVQE 500
+ ++ + GR E+ + + + + S G S I N E+ E
Sbjct: 533 CMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGE 580
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 188/403 (46%), Gaps = 36/403 (8%)
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ S++ NA++ Y + + A +F++M +RD+ +WN +++GY R ++ +A LFD
Sbjct: 74 RRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDL 133
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
MP +VSW AM+SGY G EA +VF +M + IS +L A G L+
Sbjct: 134 MPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP----HRNSISWNGLLAAYVHNGRLK-- 187
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
E ++ +++ + N L+ Y+K + A QLFD+M RDV+SW+T+I G A
Sbjct: 188 EARRLFESQSNW--ELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQV 245
Query: 329 GKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
G +A LF+E P D+ T+ ++S G +E YFD M + I
Sbjct: 246 GDLSQAKRLFNE-----SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEIS---- 296
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
Y ++ + ++ A + E MP + + W ++++ Y A + ++
Sbjct: 297 -YNAMLAGYVQYKKMVIAGELFEAMPCR-NISSWNTMITG---YGQNGGIAQARKLFDMM 351
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRM---RKLIRSKSMKKTPGCSL--------IEVNN 496
D ++ + + YA++G +E+ M K S + T C+L +E+
Sbjct: 352 PQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGK 411
Query: 497 EV--QEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYE 537
+V Q +G +T F+ + + D A DV + + E
Sbjct: 412 QVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEE 454
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 49/261 (18%)
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
+ D DIV WN IS + R G A +F+ MP + VS+ AMISGY ++ A D+
Sbjct: 40 KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDL 99
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
F +M P+ +L W N ++ Y++
Sbjct: 100 FDKM------PER----------------DLFSW-----------------NVMLTGYVR 120
Query: 297 CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
+ +A +LFD M ++DVVSW+ ++ G A +G +A +F++M N I++ GL
Sbjct: 121 NRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPH----RNSISWNGL 176
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
L+A H G E F+S I + CL+ + L A + + MP++
Sbjct: 177 LAAYVHNGRLKEARRLFESQSNWELIS-----WNCLMGGYVKRNMLGDARQLFDRMPVR- 230
Query: 417 DAKIWGSLLSSCRTYSNLEIA 437
D W +++S +L A
Sbjct: 231 DVISWNTMISGYAQVGDLSQA 251
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 292/524 (55%), Gaps = 43/524 (8%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F IL +C +++ +++H I+K + ++ + ++D+ GDL A + + ++
Sbjct: 268 FPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETME 327
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA-GLLC 132
+ +V +N+++ + + L A+ L+K M G + D +T P V+ C G +
Sbjct: 328 DDDVVSWNSLMVGFVRHGLEEEALRLFKNM-----HGRNMKIDDYTFPSVLNCCVVGSIN 382
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
P K +H + K G +++ + NAL+D+Y
Sbjct: 383 P---KSVHGLIIKTGFENYKLVSNALVDMY------------------------------ 409
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
A+ G M A +F+KM ++SWT++++GY S+ E+L +F M++ G+ PD+ +
Sbjct: 410 -AKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIV 468
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
S+L ACA+L LE G+ +H+ K+ L + N+L+ MY KCGC++ A +F M
Sbjct: 469 ASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV 528
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+DV++W+ +I G A +GK ++ + M P+ ITFIGLL AC+H G +EG Y
Sbjct: 529 KDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKY 588
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F M + + I+ EHY C++DL GR+G+LD+A ++++M +KPDA +W SLLS+CR +
Sbjct: 589 FQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHE 648
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
NLE+A A +L LEP + YV+LSN+Y+ +W DV+++RKL++SK + K PGCS +
Sbjct: 649 NLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWL 708
Query: 493 EVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
E+N+ V F+S D P +I+ ++ + L A V D+ +
Sbjct: 709 EINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSF 752
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 144/277 (51%), Gaps = 14/277 (5%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
N LL+ K ++ +A K+F++M +D +WN +IS Y +G++ +AR LFD + +
Sbjct: 69 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
+W+++ISGY G EA D+FR M++ G + + ++ SVL C+ LG ++ GE IH +
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFD--QMVERDVVSWSTVIGGLANHGKAHK 333
KN + L++MY KC C+++A LF + ++ V W+ ++ G A +G +K
Sbjct: 189 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYK 248
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHT-----GFWNEGLMYFDSMKRDHHIEHKIEH 388
A+ F M V N TF +L+AC+ G G + + +++
Sbjct: 249 AVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQ----- 303
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
LVD+ + G L A N++E M D W SL+
Sbjct: 304 -SALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLM 338
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 193/442 (43%), Gaps = 87/442 (19%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAM 83
C+ + L+ IHT +S + ++++ + G + A LF ++ + + + +N M
Sbjct: 45 CKFMAFLRSIHTTTAASY--ESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTM 102
Query: 84 IRAYTN-------NHLYG------------------------LAINLYKQMLRDPRTGSL 112
I +Y N L+ A +L++ M + S
Sbjct: 103 ISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKAS- 161
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
+FTL V++ C+ L G+ IH V K G + + L+D+Y KC + EA
Sbjct: 162 ----QFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAE 217
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
+F+ + FD+ + V WTAM++GY G +
Sbjct: 218 FLFKGLE--------------------------FDRKNH---VLWTAMVTGYAQNGDGYK 248
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
A++ FR M G+E ++ + ++L AC+ + + GE +H + K+ + +AL++
Sbjct: 249 AVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVD 308
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
MY KCG + A + + M + DVVSW++++ G HG +A+ LF M + +D T
Sbjct: 309 MYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYT 368
Query: 353 FIGLLSACAHTGFWN----EGLMYFDSMKRDHHIEHKIEHY----GCLVDLLGRAGRLDQ 404
F +L+ C G N GL+ I+ E+Y LVD+ + G +D
Sbjct: 369 FPSVLNCCV-VGSINPKSVHGLI----------IKTGFENYKLVSNALVDMYAKTGDMDC 417
Query: 405 ALNIIEEMPMKPDAKIWGSLLS 426
A + E+M ++ D W SL++
Sbjct: 418 AYTVFEKM-LEKDVISWTSLVT 438
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 166/364 (45%), Gaps = 47/364 (12%)
Query: 12 ELEDRFVPILQSC--ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLF 69
+++D P + +C I K +H I+K + ++D+ GD+ A +F
Sbjct: 363 KIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVF 422
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+++ E +V + +++ Y N+ + ++ ++ M TG + PD+F + ++ +CA
Sbjct: 423 EKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDM---RVTG--VNPDQFIVASILSACAE 477
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L GKQ+H K GL+ N+L+ +Y KC L +A +F M +D++ W +
Sbjct: 478 LTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAI 537
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
I GYA+ G+ + + +D AM+S G PD
Sbjct: 538 IVGYAQNGKGRNSLKFYD-----------AMVSS--------------------GTRPDF 566
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA-LIEMYIKCGCINQASQLFD 308
I+ + +L AC+ G ++ G +K + ++ A +I+++ + G +++A QL D
Sbjct: 567 ITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLD 626
Query: 309 QM-VERDVVSWSTVIGGLANHGK---AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
QM V+ D W +++ H A +A E++ P N + ++ L + + +
Sbjct: 627 QMDVKPDATVWKSLLSACRVHENLELAERAATNLFELE----PMNAMPYVMLSNMYSASR 682
Query: 365 FWNE 368
WN+
Sbjct: 683 KWND 686
>gi|224126363|ref|XP_002329535.1| predicted protein [Populus trichocarpa]
gi|222870244|gb|EEF07375.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 187/534 (35%), Positives = 287/534 (53%), Gaps = 75/534 (14%)
Query: 19 PILQ----SCENLIELKKIHTQILKYLLSQSNFLVTKMID-VCNSGGDLAYASLLFKQVK 73
PILQ SC N+ + +IHTQ+ L Q F ++ I +C +++ L+ ++
Sbjct: 59 PILQKLEQSCTNIKQFNQIHTQLTVLGLFQHPFAASRYIKKLCACLNSVSHCVSLYNHIE 118
Query: 74 EPNVFLYNAMIRAYTN-NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
EP+ F+ N ++R++ N N +G Y++M+ +LP+ +T P V K CA +
Sbjct: 119 EPDAFMCNTIMRSFVNVNDPFGALRFYYEKMI-----AKWVLPNHYTFPLVAKVCADIGS 173
Query: 133 PSLGKQIHAHVCKFG-----------LKSHSI--------------------TENALLDL 161
G+++HA V KFG ++ +S+ + N+++D
Sbjct: 174 LREGQKVHALVVKFGFELDLFVRNSFIRFYSVCGRTSDARMVFDNGFVLDLVSWNSMIDG 233
Query: 162 YGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
Y K EL A ++F+EM +RDI WN++ISGY +G M+ AR LFDKMP +VSW MI
Sbjct: 234 YVKNGELGLAREIFDEMYERDIFTWNSMISGYVGVGDMEAARGLFDKMPSRDVVSWNCMI 293
Query: 222 SGYTHIGSYAEALDVFRQM-----------------------------QMVGIE--PDEI 250
G+ I + A F +M MVG + PDE
Sbjct: 294 DGFARIKDVSMAAKFFDEMPLRNVVSWNVMLALYLRCKKYSDCLRFFDMMVGGDFVPDEA 353
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
S+VSVL ACA+L L+ G+W+H Y N + ++ AL+ MY KCG ++ A ++FD+M
Sbjct: 354 SLVSVLTACAELKMLDQGKWVHSYMKDNGIKPDMLLSTALLTMYAKCGAMDLAREVFDKM 413
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF-WNEG 369
E+ VVSW+++I G HG KA+ +F EM++ PND TF+ +LSAC+H+G WN G
Sbjct: 414 PEKSVVSWNSMIIGYGIHGHGDKALEMFREMEKGGPMPNDATFMSVLSACSHSGMVWN-G 472
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YFD M R + I+ K EHYGCLVDLLG+AG + + ++ + + + +WG LLS+CR
Sbjct: 473 WWYFDLMHRKYRIQPKPEHYGCLVDLLGQAGLKEPSEDLTRKTHTEVEPTLWGDLLSACR 532
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
+ E I + L+ L P Y+LLSN Y GRW+DV +R +++K++
Sbjct: 533 AHCISEPGEILAKQLIKLFPNHVVPYLLLSNTYVAEGRWDDVENLRMTLKNKTL 586
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 271/496 (54%), Gaps = 40/496 (8%)
Query: 18 VPILQSCEN--LIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V + C + LI L + +H +K S+ + ++D+ + GDL A ++F+++
Sbjct: 300 VSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSG 359
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+V Y +MI Y L G A+ L+++M + I PD +T+ V+ CA
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-----ISPDVYTVTAVLNCCARNRLLD 414
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK++H + + + NAL+D+Y A
Sbjct: 415 EGKRVHEWIKENDMGFDIFVSNALMDMY-------------------------------A 443
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIV 253
+ G M++A ++F +M I+SW +I GY+ EAL +F + + PDE ++
Sbjct: 444 KCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVA 503
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
VLPACA L + + G IH Y +N + N+L++MY KCG + A LFD + +
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSK 563
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+ +I G HG +AI LF++M++ + P++I+F+ LL AC+H+G +EG +F
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFF 623
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ M+ + IE +EHY C+VD+L R G L +A IE MP+ PDA IWG+LL CR + +
Sbjct: 624 NIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHD 683
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+++A E + LEPE+TG YVL++NIYA+ +WE+V R+RK I + ++K PGCS IE
Sbjct: 684 VKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIE 743
Query: 494 VNNEVQEFVSGDDTKP 509
+ V FV+GD + P
Sbjct: 744 IKGRVNIFVAGDSSNP 759
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 190/391 (48%), Gaps = 43/391 (10%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GDL AS +F QVK +N ++ + + +I L+K+M+ S + D +T
Sbjct: 143 GDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM-----SSGVEMDSYT 197
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
V KS + L + G+Q+H ++ K G + N+L+ Y K + A KVF+EMT
Sbjct: 198 FSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMT 257
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+RD+++WN++I+GY G +K L VF Q
Sbjct: 258 ERDVISWNSIINGYVSNGLAEK-------------------------------GLSVFVQ 286
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M GIE D +IVSV CA + LG +H + K R CN L++MY KCG
Sbjct: 287 MLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++ A +F +M R VVS++++I G A G A +A+ LF EM+ + P+ T +L+
Sbjct: 347 LDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
CA +EG + +K ++ + I L+D+ + G + +A + EM +K D
Sbjct: 407 CARNRLLDEGKRVHEWIK-ENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVK-DII 464
Query: 420 IWGSLLS--SCRTYSNLEIAVIAMEHLLVLE 448
W +++ S Y+N +++ +LL++E
Sbjct: 465 SWNTVIGGYSKNCYAN---EALSLFNLLLVE 492
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 114/225 (50%), Gaps = 3/225 (1%)
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y G +K+A +FD++ + W +++ G ++ ++ +F++M G+E D +
Sbjct: 139 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V + + L S+ GE +H Y K+ R + N+L+ Y+K ++ A ++FD+M E
Sbjct: 199 SCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTE 258
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-LM 371
RDV+SW+++I G ++G A K + +F +M + + T + + + CA + + G +
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
+ +K E + L+D+ + G LD A + EM +
Sbjct: 319 HCFGVKACFSREDRF--CNTLLDMYSKCGDLDSAKVVFREMSGRS 361
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D ++ SVL CA SL+ G+ + + N + + + + L MY CG + +AS++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
DQ+ + W+ ++ LA G +I LF +M V + TF
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 276/506 (54%), Gaps = 39/506 (7%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L + L ELK I LK ++++T +I + + GD+ A LLF+++ P+
Sbjct: 215 VLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPD 274
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ YNAMI +T N ++ L++++L +G + + S G L L
Sbjct: 275 LIAYNAMISGFTANGGTECSVKLFRELLF---SGERVSSSTIVGLIPLHSPFGHL--HLA 329
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
IH K G+ + A +Y K +E+ D+
Sbjct: 330 CSIHGFCVKSGIILNPTVSTAFTAIYNKLNEI-------------DL------------- 363
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
AR LFD+ P T+V+W AMISGYT GS A+ +F++M P+ ++I ++L
Sbjct: 364 -----ARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTIL 418
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACAQLGSL G+W+H +L + AL++MY KCG I++A QLFD M E++ V
Sbjct: 419 SACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTV 478
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+T+I G HG H+A+ L++EM L P+ +TF+ +L AC+H G EG F +M
Sbjct: 479 TWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNM 538
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ IE IEHY C+VD+LGR+G+L++AL I++MP++P +WG+LL +C + + +I
Sbjct: 539 VNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDI 598
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A +A E L L+P G YVLLSNIY+ + + +R++++ + + K+PGC+LIEVN
Sbjct: 599 ARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNG 658
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLA 522
FVSGD + DI+ LE L
Sbjct: 659 TPHVFVSGDRSHSHATDIYAKLEKLT 684
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 183/405 (45%), Gaps = 38/405 (9%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
+ +C N L +H + + F+ + ++D+ + YA +F + E + L+
Sbjct: 118 VAACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLW 177
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N MI N + +I L+++M+ D + D T+ V+ + A L +G I
Sbjct: 178 NTMINGLVKNCCFDDSIQLFREMVADG-----VRVDSSTVTAVLPAAAELQELKVGMGIQ 232
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
K G +G CD ++ LIS Y++ G +
Sbjct: 233 CLALKIG--------------FGFCDYVLTG-----------------LISLYSKCGDVN 261
Query: 201 KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
AR+LF ++ ++++ AMISG+T G ++ +FR++ G +IV ++P +
Sbjct: 262 TARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHS 321
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
G L L IH +C K+ ++ + A +Y K I+ A LFD+ E+ VV+W+
Sbjct: 322 PFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNA 381
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
+I G +G AI LF EM + + PN +T +LSACA G + G + + +
Sbjct: 382 MISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFG-KWVHHLIKSE 440
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
++E I LVD+ + G + +A + + M K + W +++
Sbjct: 441 NLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK-NTVTWNTMI 484
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 221/521 (42%), Gaps = 85/521 (16%)
Query: 5 IGALSIKELEDRFVPILQSCENLIELKKIHTQIL----KYLLSQSNFLVTKMIDVCNSGG 60
+G S K + ++ L + H Q + ++ L+ L K+ D +
Sbjct: 3 LGNSSGKLSRNTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSAT-- 60
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+A LF V +P++FL+N ++R ++ N +I+LY + R+ + PD FT
Sbjct: 61 --RHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTN----LSPDNFTY 114
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
F + +C+ L +HAH G S+ +AL+DLY K ++ A KVF+ M +
Sbjct: 115 AFAVAACSNDKHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPE 171
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD V WN +I+G + FD +++ +FR+M
Sbjct: 172 RDTVLWNTMINGLVK-------NCCFD------------------------DSIQLFREM 200
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
G+ D ++ +VLPA A+L L++G I K + LI +Y KCG +
Sbjct: 201 VADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDV 260
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS-- 358
N A LF ++ D+++++ +I G +G ++ LF E+ + T +GL+
Sbjct: 261 NTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLH 320
Query: 359 --------ACAHTGFW-NEGLMYFDSMKR-------------------DHHIEHKIEHYG 390
AC+ GF G++ ++ D E + +
Sbjct: 321 SPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWN 380
Query: 391 CLVDLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
++ + G + A+++ +EM P+A ++LS+C +L + HL+
Sbjct: 381 AMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKW-VHHLIKS 439
Query: 448 EPEDTGNYV--LLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
E + YV L ++YAK G ++S +L S S K T
Sbjct: 440 ENLEPNIYVSTALVDMYAKCG---NISEAWQLFDSMSEKNT 477
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 180/523 (34%), Positives = 287/523 (54%), Gaps = 40/523 (7%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+ IL +C + LK+ I I++ + + T ++ + G L A +F+++
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS 475
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ NV +NAMI AY + Y A+ ++ +L++ I P+ T ++ C
Sbjct: 476 KQNVVAWNAMITAYVQHEQYDNALATFQALLKEG-----IKPNSSTFTSILNVCKSSDSL 530
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LGK +H + K GL+S NAL+ ++ C +L+
Sbjct: 531 ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMS----------------------- 567
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ LF+ MP +VSW +I+G+ G A D F+ MQ GI+PD+I+
Sbjct: 568 --------AKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFT 619
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+L ACA +L G +H + ++ LI MY KCG I A Q+F ++ ++
Sbjct: 620 GLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKK 679
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+V SW+++I G A HG+ +A+ LF++MQ+ V P+ ITF+G LSACAH G EGL +F
Sbjct: 680 NVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHF 739
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SMK + +IE ++EHYGC+VDL GRAG L++A+ I +M ++PD+++WG+LL +C+ + N
Sbjct: 740 QSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLN 798
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A A + L L+P D G +V+LSNIYA G W++V++MRK++ + + K PG S IE
Sbjct: 799 VELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIE 858
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
V+ +V F S D T P ++I LE L + + V D Y
Sbjct: 859 VDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRY 901
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 222/454 (48%), Gaps = 59/454 (12%)
Query: 4 RIGALSIKELEDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
R+ + I+ + +LQ C +NL + ++I+ I K + F+ +I++ G
Sbjct: 100 RVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCG 159
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+ A +F ++E +V+ +N ++ Y + LY A L++QM++D + PDK T
Sbjct: 160 NTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS-----VKPDKRTF 214
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
++ +CA G++++ + K G + AL++++ KC ++ +A KVF+ +
Sbjct: 215 VSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT 274
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+V W ++I+G AR G+ K +A ++F++M
Sbjct: 275 RDLVTWTSMITGLARHGRFK-------------------------------QACNLFQRM 303
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ G++PD+++ VS+L AC +LE G+ +H + + A++ MY KCG +
Sbjct: 304 EEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSM 363
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A ++FD + R+VVSW+ +I G A HG+ +A F++M + PN +TF+ +L AC
Sbjct: 364 EDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGAC 423
Query: 361 AHTGFWNEGLMYFDSMKRDHHIE-HKIEH-YG-------CLVDLLGRAGRLDQALNIIEE 411
+ ++KR I+ H IE YG L+ + + G L A + E+
Sbjct: 424 SSP----------SALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+ K + W +++++ + + A+ + LL
Sbjct: 474 IS-KQNVVAWNAMITAYVQHEQYDNALATFQALL 506
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 188/421 (44%), Gaps = 55/421 (13%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L++C E L + KK+H ++ + ++ T ++ + G + A +F VK
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK 374
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
NV + AMI + + A + +M+ S I P++ T ++ +C+
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE-----SGIEPNRVTFMSILGACSSPSAL 429
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+QI H+ + G S ALL +Y KC
Sbjct: 430 KRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC---------------------------- 461
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G +K A +F+K+ +V+W AMI+ Y Y AL F+ + GI+P+ +
Sbjct: 462 ---GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFT 518
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L C SLELG+W+H K L + NAL+ M++ CG + A LF+ M +R
Sbjct: 519 SILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR 578
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+T+I G HGK A F MQ + P+ ITF GLL+ACA EG
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG---- 634
Query: 374 DSMKRDHHIEHKIEHYGC-------LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
R H + C L+ + + G ++ A + ++P K + W S+++
Sbjct: 635 ----RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIA 689
Query: 427 S 427
Sbjct: 690 G 690
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 174/369 (47%), Gaps = 40/369 (10%)
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDR----DIVAWNNLISGYARLGQMKKARMLFDKM 209
T +ALL L K L + +++ + DI N LI+ YA+ G A+ +FD M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
+ SW ++ GY G Y EA + QM ++PD+ + VS+L ACA +++ G
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
++ K + ALI M+IKCG I A+++FD + RD+V+W+++I GLA HG
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR---DHHI---- 382
+ +A +LF M+ V P+ + F+ LL AC H +G MK D I
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 383 ------------EHKIE-----------HYGCLVDLLGRAGRLDQA---LNIIEEMPMKP 416
E +E + ++ + GR+D+A N + E ++P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPEDTGNYVLLSNIYAKHGRWEDVSRM 474
+ + S+L +C + S L+ +H++ +D LLS +YAK G +D R+
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS-MYAKCGSLKDAHRV 470
Query: 475 RKLIRSKSM 483
+ I +++
Sbjct: 471 FEKISKQNV 479
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 167/368 (45%), Gaps = 49/368 (13%)
Query: 9 SIKELEDRFVPILQSCE--NLIELKK-IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
IK F IL C+ + +EL K +H I+K L + ++ + + GDL A
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF + + ++ +N +I + + +A + +K M S I PDK T ++
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE-----SGIKPDKITFTGLLN 623
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA + G+++HA + + + L+ +Y KC + +AH+VF ++ +++ +
Sbjct: 624 ACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYS 683
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W ++I+GYA+ G+ K EAL++F QMQ G+
Sbjct: 684 WTSMIAGYAQHGRGK-------------------------------EALELFYQMQQEGV 712
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+PD I+ V L ACA G +E G + ++ R +++++ + G +N+A +
Sbjct: 713 KPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVE 772
Query: 306 LFDQM-VERDVVSWSTVIGGLANHGK---AHKAIHLFHEMQRLKVPPNDI-TFIGLLSAC 360
+M VE D W ++G H A KA ++L++ PND F+ L +
Sbjct: 773 FIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQ-----KKLELDPNDNGVFVILSNIY 827
Query: 361 AHTGFWNE 368
A G W E
Sbjct: 828 AAAGMWKE 835
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 38/302 (12%)
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
A+++ + G + EA+ V ++ I+ + ++L C + +L GE I+ + K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + + N LI MY KCG A Q+FD M E+DV SW+ ++GG HG +A L
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR--------------DHHIE 383
+M + V P+ TF+ +L+ACA ++G ++ + + + HI+
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 384 ----------------HKIEHYGCLVDLLGRAGRLDQALNI---IEEMPMKPDAKIWGSL 424
+ + ++ L R GR QA N+ +EE ++PD + SL
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPE-DTGNYV--LLSNIYAKHGRWEDVSRMRKLIRSK 481
L +C LE H + E DT YV + ++Y K G ED + L++ +
Sbjct: 319 LRACNHPEALEQG--KKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR 376
Query: 482 SM 483
++
Sbjct: 377 NV 378
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 167/380 (43%), Positives = 231/380 (60%), Gaps = 6/380 (1%)
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEE--MTDRDIVAWNNLISGYARLGQMKKA 202
K G +H + N LL LY L +A +VF+ T D+V+WN ++SGY + G ++ A
Sbjct: 109 KCGALAHPVVTNCLLKLYCALGMLPDARRVFDTSGATALDVVSWNTMVSGYGKCGDLEAA 168
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R +F +MP +VSW+AMI G ++EAL VF QM G +PD + +VSVL CA L
Sbjct: 169 REVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHL 228
Query: 263 GSLELGEWIHMYCDKNHLLRR---TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
G+LE G W+H + L R ++ AL++MY KCGC+N+A +FD + DVV W+
Sbjct: 229 GALERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFDGVQSHDVVLWN 288
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+IGGLA +G +A+ LF M PN+ TF+ L AC HTG +EG F SM RD
Sbjct: 289 AMIGGLAMNGHGKRALELFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRSM-RD 347
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
H IE + EHYGCL DLLGRAG L++A ++ +MPM+P A WG+L+SSC ++N+ +
Sbjct: 348 HGIEPRREHYGCLADLLGRAGLLEEAEGVLLDMPMEPHASQWGALMSSCLMHNNVGVGER 407
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
+ L+ LEP+D G YV L N+YA +G WED +RK++ + KK G S IE N V
Sbjct: 408 VGKKLIELEPDDGGRYVALFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIEWNGLVH 467
Query: 500 EFVSGDDTKPFLKDIFWLLE 519
EF SGD P + I+ LLE
Sbjct: 468 EFRSGDTRHPQTRLIYALLE 487
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GDL A +F ++ E + ++AMI A + A+ ++ QM TG+ PD
Sbjct: 163 GDLEAAREVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFDQM-----TGNGFKPDAVV 217
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCK---FGLKSHSITENALLDLYGKCDELIEAHKVFE 176
L V+K+CA L G+ +H + G + + E AL+D+Y KC + EA VF+
Sbjct: 218 LVSVLKTCAHLGALERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFD 277
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV----SWTAMISGYTHIGSYAE 232
+ D+V WN +I G A G K+A LF +M V ++ + H G E
Sbjct: 278 GVQSHDVVLWNAMIGGLAMNGHGKRALELFRRMLDKGFVPNESTFVVALCACIHTGRVDE 337
Query: 233 ALDVFRQMQMVGIEP 247
DVFR M+ GIEP
Sbjct: 338 GEDVFRSMRDHGIEP 352
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 174/503 (34%), Positives = 277/503 (55%), Gaps = 36/503 (7%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
K IH ++ ++ + T + D+ + G + A L+F + + V +N+M+ Y N
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
AI ++++ML + I P T+ + +CA L GK +H V + L S
Sbjct: 328 GEPEKAIAVFEKMLEEG-----IDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGS 382
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
DI N+LIS Y++ ++ A +F+ +
Sbjct: 383 -------------------------------DISVMNSLISMYSKCKRVDIASDIFNNLN 411
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
T VSW AMI GY G +EAL+ F +M+ +G++PD ++VSV+PA A+L +W
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKW 471
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
IH ++ L + + AL++MY KCG I+ A +LFD + +R V++W+ +I G HG
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
A+ LF +M++ V PNDIT++ ++SAC+H+G +EGL +F SMK+D+ +E ++HYG
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
+VDLLGRAGR+ +A + IE MP+ P ++G+ +C+ + N+E+ A + L L P+
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPD 651
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
+ G +VLL+NIYA +W V+ +RK + K +KKTPGCS++E+ NEV F SG T P
Sbjct: 652 EGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQ 711
Query: 511 LKDIFWLLELLALHQDRAKDVID 533
K I+ LE L A V D
Sbjct: 712 SKRIYAFLEELVYEIKAAGYVPD 734
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 187/393 (47%), Gaps = 37/393 (9%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+ C ++ EL +I ++K L + TK++ + + G + A+ +F+ + + L
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
Y+ M++ Y N A+ +M D + P + +++K C GK+I
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDD-----VKPVVYNFTYLLKVCGDNADLKRGKEI 169
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H + ++ ++++Y KC ++ +A+K+F+ M +RD+V+WN +I+G+++ G
Sbjct: 170 HGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFA 229
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
KK AL++ +MQ G PD I++V+VLPA
Sbjct: 230 KK-------------------------------ALELVLRMQDEGQRPDSITLVTVLPAA 258
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A +G L +G+ IH Y + + I AL +MY KCG + A +FD M ++ VVSW+
Sbjct: 259 ADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWN 318
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+++ G +G+ KAI +F +M + P +T + L ACA G G +
Sbjct: 319 SMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG-KFVHKFVDQ 377
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
++ I L+ + + R+D A +I +
Sbjct: 378 LNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 193/409 (47%), Gaps = 50/409 (12%)
Query: 10 IKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS 66
+K + F +L+ C + +LK+ IH Q++ + + F +T ++++ + A
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
+F ++ E ++ +N +I ++ N A+ L +M + + PD TL V+ +
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQR-----PDSITLVTVLPA 257
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
A + +GK IH + + G AL D+Y KC + A +F+ M + +V+W
Sbjct: 258 AADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSW 317
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
N+++ GY + G+ +K A+ VF +M GI+
Sbjct: 318 NSMMDGYVQNGEPEK-------------------------------AIAVFEKMLEEGID 346
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
P ++I+ L ACA LG LE G+++H + D+ +L + N+LI MY KC ++ AS +
Sbjct: 347 PTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDI 406
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF- 365
F+ + R VSW+ +I G A +G+ +A++ F EM+ L + P+ T + ++ A A
Sbjct: 407 FNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVT 466
Query: 366 ----WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
W GL+ + ++ + LVD+ + G + A + +
Sbjct: 467 RHAKWIHGLIIRSCLDKNIFVT------TALVDMYSKCGAIHMARKLFD 509
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 132/325 (40%), Gaps = 35/325 (10%)
Query: 131 LCPSLGK--QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
LC S+ + QI V K GL + + + L+ L+ K + EA +VFE + D+
Sbjct: 58 LCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDK------- 110
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
D + +T M+ GY S AL +M+ ++P
Sbjct: 111 -----------------LDALYHT-------MLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+ +L C L+ G+ IH N ++ MY KC I+ A ++FD
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M ERD+VSW+T+I G + +G A KA+ L MQ P+ IT + +L A A G
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G R + L D+ + G ++ A I + M K W S++
Sbjct: 267 GKSIHGYAIR-AGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS-WNSMMDGY 324
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTG 453
E A+ E +L + TG
Sbjct: 325 VQNGEPEKAIAVFEKMLEEGIDPTG 349
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 15/236 (6%)
Query: 21 LQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
L +C +L +L++ +H + + L ++ +I + + + AS +F +
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL-PDKFTLPFVIKSCAGLLCPSLG 136
+NAMI Y N A+N + +M SL + PD FT+ VI + A L
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEM------KSLGMKPDSFTMVSVIPALAELSVTRHA 469
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K IH + + L + AL+D+Y KC + A K+F+ ++DR ++ WN +I GY
Sbjct: 470 KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTH 529
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEP 247
G + A LFDKM + +++ ++IS +H G E L F+ M Q G+EP
Sbjct: 530 GLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEP 585
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+P L K IH I++ L ++ F+ T ++D+ + G + A LF + + +V
Sbjct: 457 IPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHV 516
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--GLLCPSL 135
+NAMI Y + L A++L+ +M + + P+ T VI +C+ GL+ L
Sbjct: 517 ITWNAMIDGYGTHGLGRAALDLFDKMKK-----GAVEPNDITYLSVISACSHSGLVDEGL 571
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+ + +GL+ A++DL G+ + EA E M
Sbjct: 572 -RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENM 613
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 178/488 (36%), Positives = 269/488 (55%), Gaps = 41/488 (8%)
Query: 26 NLIELKKIHTQILKYLLSQSN----FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYN 81
++ + ++H +ILK SN F + GDL YA + + + PN F YN
Sbjct: 5 SMTQAMQLHARILKSGAYDSNHGQDFHKLFTFSALSPSGDLNYARHILRTLHTPNSFYYN 64
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP--DKFTLPFVIKSCAGLLCPSLGKQI 139
MIRAY+++ A L+ M ++P S+ +P D FT PFV+K+C+ GKQI
Sbjct: 65 TMIRAYSDSTDPTRAFTLFLYM-QNPDDASVAVPRPDHFTYPFVLKACSKSGHARFGKQI 123
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H V K G+ S NAL+ LY E A+KVF
Sbjct: 124 HGLVFKSGVGSDRYINNALIHLYSVSGEPNLAYKVF------------------------ 159
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
DKMP +VSWT++I G+ EA+ +F M GIEP+E+++ SVL AC
Sbjct: 160 -------DKMPDRDVVSWTSIIDGFVDNDRPIEAIRLFTHMIENGIEPNEVTVASVLRAC 212
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A G+L GE IH + + + + ALI+MY KCGCI+ A ++FD+ +E+DV W+
Sbjct: 213 ADTGALNTGERIHSFVKEKNFSSNANVSTALIDMYAKCGCIDGALEVFDETLEKDVYVWT 272
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I GLA+HG KAI F M++ V ++ +LSA + G +EGL++F +K+
Sbjct: 273 AIIAGLASHGLCMKAIEFFENMKKSDVKMDERAITAVLSAYRNAGLVSEGLLFFRRLKK- 331
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA-- 437
H I+ I+HYGC+VD+L RAGRL A I +MP++PDA +W +L+ C+ ++E +
Sbjct: 332 HKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRKMPIEPDAVLWRTLIWGCKILGDVERSER 391
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
++ LL ++ DTG+YVLL N+YA G+WE+ ++ R+L+ + + K P CS IE++
Sbjct: 392 LVRELELLNMDSRDTGSYVLLENVYAATGKWEEKAKTRELMYQRGLMKPPACSRIEIDGV 451
Query: 498 VQEFVSGD 505
V EF +GD
Sbjct: 452 VHEFTAGD 459
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 262/458 (57%), Gaps = 31/458 (6%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+N +I +YT + A+N+Y Q+ + D F P V+K+C + LGK+I
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMD-----FEVDNFMAPSVLKACGQVSWTQLGKEI 181
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW----NNLISGYAR 195
H V K GL NAL+ +YG+C + A VF++M +RD+V+W L+ YA+
Sbjct: 182 HGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAK 241
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + AR LF+ + T+VSWTAMI+G E +F +MQ I P+EI++++
Sbjct: 242 CGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLN- 300
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
E + + C ++ AL++MY KCG IN A +LF + + RD+
Sbjct: 301 ------------KERVEVDC---------ILNTALVDMYAKCGDINAAGRLFIEAISRDI 339
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
W+ +I G A HG +A+ +F EM+R V PNDITFIGLL AC+H G EG F+
Sbjct: 340 CMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEK 399
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M + +IEHYGC+VDLLGRAG LD+A +I+ MP+KP+ +WG+L+++CR + N +
Sbjct: 400 MVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQ 459
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ +A LL +EPE+ G VL+SNIYA RW D + +RK +++ MKK PG S+IEVN
Sbjct: 460 LGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVN 519
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
V EF+ GD + P ++ I +L + + A V D
Sbjct: 520 GTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPD 557
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 48 LVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYG-LAINLYKQMLRD 106
L T ++D+ GD+ A LF + ++ ++NA+I + H YG A++++ +M R
Sbjct: 310 LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFA-MHGYGEEALDIFAEMERQ 368
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH-VCKFGLKSHSITENALLDLYGKC 165
+ P+ T ++ +C+ + GK++ V FGL ++DL G+
Sbjct: 369 G-----VKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 423
Query: 166 DELIEAHKVFEEMTDR-DIVAWNNLISG-----YARLGQMKKARML---FDKMPYTTIVS 216
L EAH++ + M + + + W L++ +LG++ ++L + Y ++S
Sbjct: 424 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 483
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+ Y +++A V + M+ VG++ +
Sbjct: 484 -----NIYAAANRWSDAAGVRKTMKTVGMKKE 510
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 285/510 (55%), Gaps = 41/510 (8%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSG--GDLAYASLLF 69
E + +L+ C N+ E K++H + +K L S+ + +SG + YA+ +F
Sbjct: 31 EQECLYLLKRCNNIDEFKQVHARFIKLSLFCSSSFSASSVLAKCAHSGWENSMNYAASIF 90
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ + +P F + MIR Y N + +A+ Y +M+ I PD FT P ++K+C
Sbjct: 91 RGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERG-----IEPDNFTYPCLLKACTR 145
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L GKQIH HV K GL++ D+ N+L
Sbjct: 146 LKAIREGKQIHGHVFKLGLEA-------------------------------DVFVQNSL 174
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPD 248
I+ Y R G+M+ + +F+K+ + + SW++M S +G ++E L +FR+M + ++ +
Sbjct: 175 INMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAE 234
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
E +VS L ACA G+L LG IH + +N ++ +L++MY+KCGCI+ A +F
Sbjct: 235 ESGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQ 294
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M +R+ +++S +I G A HG+ A+ +F EM + + P+ + ++ LL+AC+H+G E
Sbjct: 295 KMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKE 354
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G F M ++ +E EHYGCLVDLLGRAG L++AL I+ +P++ + +W S LS C
Sbjct: 355 GRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQC 414
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R + N+E+ IA + LL L + G+Y+L+SN+Y++ W+DV+R R I K +K+TPG
Sbjct: 415 RVHQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPG 474
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
S ++V + FVS D + P K+I+ +L
Sbjct: 475 FSTVKVKGKTHRFVSQDRSHPQCKEIYKML 504
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 179/517 (34%), Positives = 285/517 (55%), Gaps = 45/517 (8%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L+ C +L +L K IH +L + ++++ GDL YA LF ++ +
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL- 135
V + A+I Y+ + A+ L +MLR + P++FTL ++K+ +G+ +
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIG-----LKPNQFTLASLLKAASGVGSTDVL 135
Query: 136 -GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
G+Q+H ++G S+ A+LD+Y +C L EA
Sbjct: 136 QGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEA----------------------- 172
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVS 254
+++FD M VSW A+I+GY G +A +F M ++P + S
Sbjct: 173 --------QLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSS 224
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
VL ACA +GSLE G+W+H K + N L++MY K G I A ++FD++ +RD
Sbjct: 225 VLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRD 284
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VVSW++++ G + HG A+ F EM R ++ PNDITF+ +L+AC+H G +EG YFD
Sbjct: 285 VVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFD 344
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
MK+ +++E +I HY +VDLLGRAG LD+A+ I EMP+KP A +WG+LL +CR + N+
Sbjct: 345 MMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNM 403
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E+ A E + L+ G +VLL NIYA GRW D +++RK+++ +KK P CS +E+
Sbjct: 404 ELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEM 463
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
NEV FV+ DD P ++I + E ++ D+ K++
Sbjct: 464 ENEVHVFVADDDAHPQRREIHNMWEQIS---DKIKEI 497
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 44/261 (16%)
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
++L C L L G+ IH + V+ N L+ +Y KCG + A +LFD+M R
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG--------- 364
DVV+W+ +I G + H + A+ L EM R+ + PN T LL A + G
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 365 -------FWNEGLMY-----FDSMKRDHHIEH----------KIE-HYGCLVDLLGRAGR 401
+ + +Y D R HH+E K E + L+ R G+
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199
Query: 402 LDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED-----TG 453
D+A + M +KP + S+L +C + +LE H L+++ + G
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWV--HALMIKWGEKLVAFVG 257
Query: 454 NYVLLSNIYAKHGRWEDVSRM 474
N +L ++YAK G ED ++
Sbjct: 258 NTLL--DMYAKSGSIEDAKKV 276
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 133/295 (45%), Gaps = 43/295 (14%)
Query: 9 SIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
++K + +L +C ++ L++ +H ++K+ F+ ++D+ G + A
Sbjct: 214 NVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDA 273
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F ++ + +V +N+M+ Y+ + L +A+ +++MLR + I P+ T V+
Sbjct: 274 KKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLR-----TRIAPNDITFLCVLT 328
Query: 126 SC--AGLLCPSLGKQIHAHVCKFGLK---SHSITENALLDLYGKCDELIEAHKVFEEMTD 180
+C AGLL G+ + K+ ++ SH +T ++DL G+ L A + EM
Sbjct: 329 ACSHAGLL--DEGRHYFDMMKKYNVEPQISHYVT---MVDLLGRAGHLDRAIQFISEMPI 383
Query: 181 RDIVA-WNNLISGYARLGQMK----KARMLFD---KMPYTTIVSWTAMISGYTHIGSYAE 232
+ A W L+ M+ A +F+ P T ++ + Y G + +
Sbjct: 384 KPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNI----YALAGRWND 439
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNHLLRRTV 285
A V + M+ G++ + PAC+ +E+ +H++ D H RR +
Sbjct: 440 AAKVRKMMKESGVKKE--------PACSW---VEMENEVHVFVADDDAHPQRREI 483
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/498 (35%), Positives = 276/498 (55%), Gaps = 32/498 (6%)
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQML-RD----------------PRTG-------- 110
+VF+ NA+I AY A ++ ++ RD PR G
Sbjct: 198 DVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMG 257
Query: 111 -SLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
S + P+ T+ ++ +CA L GK+IH + G+ + +AL+ LY KC +
Sbjct: 258 WSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVR 317
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYT 225
EA VF+ M RD+V+WN +++ Y + + +K LF KM + +W A+I G
Sbjct: 318 EARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCM 377
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
G EA+++FR+MQ +G +P+EI+I S+LPAC+ +L +G+ IH Y ++ +
Sbjct: 378 ENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLT 437
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
AL+ MY KCG +N + +FD M +DVV+W+T+I A HG +A+ LF +M +
Sbjct: 438 STTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSR 497
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
V PN +TF G+LS C+H+ EG+ F+SM RDH +E HY C+VD+ RAGRL++A
Sbjct: 498 VQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA 557
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
I+ MPM+P A WG+LL++CR Y N+E+A I+ + L +EP + GNYV L NI
Sbjct: 558 YKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTA 617
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQ 525
W + S++R L++ + + KTPGCS ++V N+V FV GD + I+ L+ L
Sbjct: 618 KMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKM 677
Query: 526 DRA--KDVIDIMYEDIGE 541
A K D + +DI +
Sbjct: 678 KMAGYKPDTDYVLQDIDQ 695
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 15/316 (4%)
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
LI +G +AR LFD +P + + +IS T G EA+ ++ +Q GI+PD
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++ ACA G + +H + ++ + NALI Y KC C+ A ++FD
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+V RDVVSW+++ G K + +F EM V PN +T +L ACA
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G R H + + LV L + + +A + + MP + D W +L++
Sbjct: 284 GKEIHGFAVR-HGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTAY 341
Query: 429 ---RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+ Y + M V E T N V+ + ++GR E+ M + ++ K
Sbjct: 342 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCM--ENGRSEEAVEMFRKMQKMGFKP 399
Query: 486 T--------PGCSLIE 493
P CS E
Sbjct: 400 NEITISSILPACSFSE 415
>gi|115441777|ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|20161377|dbj|BAB90301.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534699|dbj|BAF07082.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|125573076|gb|EAZ14591.1| hypothetical protein OsJ_04514 [Oryza sativa Japonica Group]
Length = 533
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 226/341 (66%)
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
++ NA++ +Y ++ A +VF++M RD +W+ LI GY + G M+ AR +FD+MP
Sbjct: 180 VSWNAMVVVYVNAGDVSSARRVFDQMPTRDSTSWSVLIVGYCKCGSMRSAREVFDRMPAK 239
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
+V+WTAMI+GY G E+L +FR+M+ GIEPD ++V V+ A +Q+GS EL W+
Sbjct: 240 NLVAWTAMINGYAQSGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGSTELAGWVG 299
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
Y DK + R + AL++M+ KCG +++A F ++ + D ++ +I GLA HG A
Sbjct: 300 SYVDKKRIERNDKVLTALVDMHAKCGNVDEALSAFREIAQPDAYPYTALISGLAAHGHAK 359
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
A+ +F MQ V P+ ITF+G+L+AC+H G ++GL Y+++M + + +E + +HY C+
Sbjct: 360 LALQVFERMQAQSVWPDPITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACV 419
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VD+LGRAGRL++A +++ MPM P G+LLS+C+T+ N+EIA I L LEP +T
Sbjct: 420 VDMLGRAGRLEEAFEMVQTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPHNT 479
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
GNY++LSNIYA+ +WE+ R+R ++R++ K PG S +E
Sbjct: 480 GNYIMLSNIYAEKEQWEEAERIRSVMRTRLPFKQPGSSWVE 520
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 156/333 (46%), Gaps = 42/333 (12%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEA 171
+ PD F+LPF + + A L LG +HA + L + NAL+DLY KCD+L A
Sbjct: 77 VSPDHFSLPFALNAAASLRLLPLGASLHALALRLALLPCRLPVANALVDLYAKCDDLPAA 136
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
H ++ D V++N+L+ +ARL + A LF MP T VSW AM+ Y + G +
Sbjct: 137 HTALADIAAPDAVSFNSLLCAHARLASVPDAESLFVAMPSRTQVSWNAMVVVYVNAGDVS 196
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
A VF QM R + + LI
Sbjct: 197 SARRVFDQMPT---------------------------------------RDSTSWSVLI 217
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
Y KCG + A ++FD+M +++V+W+ +I G A G +++ LF EM+ + P+
Sbjct: 218 VGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGYAQSGVPKESLALFREMEAAGIEPDAA 277
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +G++SA + G E + S IE + LVD+ + G +D+AL+ E
Sbjct: 278 TMVGVISAASQIGS-TELAGWVGSYVDKKRIERNDKVLTALVDMHAKCGNVDEALSAFRE 336
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ +PDA + +L+S + + ++A+ E +
Sbjct: 337 I-AQPDAYPYTALISGLAAHGHAKLALQVFERM 368
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+ + + K + +++ ++T ++D+ G++ A F+++ +P+ + Y A+I +
Sbjct: 298 VGSYVDKKRIERNDKVLTALVDMHAKCGNVDEALSAFREIAQPDAYPYTALISGLAAHGH 357
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLLCPSLGKQIHAHVCKFGLKS 150
LA+ ++++M + PD T V+ +C AGL+ L A V +G++
Sbjct: 358 AKLALQVFERM-----QAQSVWPDPITFVGVLTACSHAGLVDKGL-DYWEAMVKYYGMER 411
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEM 178
+ ++D+ G+ L EA ++ + M
Sbjct: 412 RADHYACVVDMLGRAGRLEEAFEMVQTM 439
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 188/523 (35%), Positives = 287/523 (54%), Gaps = 58/523 (11%)
Query: 19 PILQSCENLIEL----------KKIHTQILKYLLSQSNFLVTKMID---VCNSGGDLAYA 65
P L+ C L+ L K+IH + L+ + S+ L+ K + L YA
Sbjct: 10 PALRHCVALLRLHLAAPSLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYA 69
Query: 66 SLLFKQV---KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPF 122
+ ++ + F N ++R + +A+ L+++ L LPD T P
Sbjct: 70 VAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELHRR--------RLALPDTHTYPP 121
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
+I++CA LL G+ +HA K G + +N+L+ LYG C AHKV
Sbjct: 122 LIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKV-------- 173
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYT--TIVSWTAMISGYTHIGSYAEALDVFRQM 240
FD+MP +VSW +M++ + G E L VF +M
Sbjct: 174 -----------------------FDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEM 210
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
V PD +IVSVL ACA+ G+L LG +H+Y +K L+ + + NALI++Y KCG +
Sbjct: 211 LGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSV 270
Query: 301 NQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
N A ++F++M + R VVSW+++I GLA +G +A+ LF M+R K+ P +IT +G+L A
Sbjct: 271 NDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYA 330
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H G ++G YFD MK D+ I +IEH GC+VDLLGRAGR+++A + I MP++P+A
Sbjct: 331 CSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAV 390
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
+W +LL SC + LE+ +A E L+ L+P +G+YVLLSN+YA G W DV +RK +
Sbjct: 391 VWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMV 450
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
++K PG SL+E+ N V EFV GD + P + I+ +L +A
Sbjct: 451 KDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIA 493
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 169/371 (45%), Gaps = 45/371 (12%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ-- 71
+ P++Q+C L+ L++ +H + K F+ ++ + + G A +F +
Sbjct: 119 YPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMP 178
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
V+ N+ +N+M+ ++ N + ++ +ML G PD FT+ V+ +CA
Sbjct: 179 VRGRNLVSWNSMLNSFAANGRPNEVLTVFWEML-----GVDFAPDGFTIVSVLTACAEFG 233
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLI 190
+LG+++H +V K GL +S NAL+DLY KC + +A ++FEEM R +V+W +LI
Sbjct: 234 ALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLI 293
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
G A G F K EAL++F M+ + P EI
Sbjct: 294 VGLAANG--------FGK-----------------------EALELFSLMEREKLVPTEI 322
Query: 251 SIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++V VL AC+ G ++ G + + + R ++++ + G + +A
Sbjct: 323 TMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIIT 382
Query: 310 M-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M +E + V W T++G A H K + + L P + ++ L + A G W +
Sbjct: 383 MPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELD-PGHSGDYVLLSNLYAAVGMWAD 441
Query: 369 GLMYFDSMKRD 379
+ +M +D
Sbjct: 442 VHVLRKTMVKD 452
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 193/609 (31%), Positives = 313/609 (51%), Gaps = 89/609 (14%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILK--YLLSQSNFLVTKMIDVCNSGGDLAYA 65
L++ L + +LQ C +L LK IH+ + +LL +FL ++I + + GDL A
Sbjct: 19 LALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFL-ARLIILYSKLGDLHSA 77
Query: 66 SLLFKQ--------VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
LF + PN FL N M+RAY N AI+LY M R G + +
Sbjct: 78 RTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM---QRMGVGV--NN 132
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE---------------------- 155
FT PFV+K CA L G+ +H V + G S E
Sbjct: 133 FTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDR 192
Query: 156 ---------NALLDLYGKCDELIEAHKVFEEMTDR------------------------- 181
A++ LY + + ++A +F +M +
Sbjct: 193 MLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMA 252
Query: 182 --------------DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
D+ N+++ YA+ G +++AR++FD+M +SW +M+SGYT
Sbjct: 253 ISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQN 312
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
G +AL +F QMQ +P+ ++ + ++ AC+ LGS LG +H + + + T +
Sbjct: 313 GRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLR 372
Query: 288 NALIEMYIKCGCINQASQLFD--QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
NA+++MY+KCG ++ A ++F+ ++ ERDV SW+ +I G HG +A+ LF MQ
Sbjct: 373 NAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEG 432
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
V PNDITF +LSAC+H G +EG F M + + +++HY C+VD+LGRAG L++A
Sbjct: 433 VEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEA 491
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
+I+++P +P ++WG+LL +CR + N E+ IA +L LEPE TG YVL+SNIYA
Sbjct: 492 FRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAAS 551
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQ 525
+W++V +R+ ++S+ +KK S+IE EV F + D + P+ ++++ +E LA+
Sbjct: 552 NKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEM 611
Query: 526 DRAKDVIDI 534
V D+
Sbjct: 612 KMVGYVPDL 620
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 287/506 (56%), Gaps = 42/506 (8%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD-LAYASLLFKQVKEPNVF 78
I+ + L L++IH +I+ L ++ L+TK++ + ++Y LF + +P+ F
Sbjct: 25 IILAGPRLKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTF 84
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
L++++I + ++ Y++ML + I +T VIKS A L S+G+
Sbjct: 85 LFHSLITLTSKFSFPQESLLCYRRMLL-----ANISSSNYTFSAVIKSSADLTAFSIGET 139
Query: 139 IHAHV--CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
IH HV C +GL D ++A L+S YA+
Sbjct: 140 IHCHVYICGYGL-----------------DAYVQA----------------ALVSFYAKS 166
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + AR +FDKMP T+V+W +MISGY G EA+++F MQ +G++PD + VS+L
Sbjct: 167 GHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLL 226
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACAQ+G++ LG W+H Y +N V+ AL+ MY +CG +++A ++FD M E+++V
Sbjct: 227 SACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIV 286
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+ +I G HG +AI LF+EM PN++TF+ +LSACAH G +EG F +M
Sbjct: 287 AWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTM 346
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM-PMKPDAKIWGSLLSSCRTYSNLE 435
K+++ + +EH C+VD+LGRAG L++A I+ P +P +W ++L +C+ + N +
Sbjct: 347 KQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFD 406
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ V EHLL +EPE+ G+YV+LSNIYA GR + V ++R ++ +KK G S I+V+
Sbjct: 407 LGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVD 466
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELL 521
++V F GD + P I+ L+ L
Sbjct: 467 HKVYLFSMGDKSHPKTNQIYLYLDEL 492
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 184/508 (36%), Positives = 291/508 (57%), Gaps = 14/508 (2%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L++C + +K +IH + K FL +I G L AS +F ++ + +
Sbjct: 133 VLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRD 192
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
YN+MI Y LA ++ + + R +LI + + +S G+L +
Sbjct: 193 SVSYNSMIDGYVKGGRIDLARVVFDCIPLEER--NLISWNSLIRGYA-QSEDGIL---VA 246
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
Q+ A + + L I+ N+++D KC + +A +F+ M +RDIV+W N+I GYA+
Sbjct: 247 WQLFAKMPERDL----ISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKN 302
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSV 255
G++ AR LFD+MP +V++ AM+ GY G EAL +F MQ G D +++
Sbjct: 303 GRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIA 362
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L A AQLG ++ G IH + ++ + ALI+MY KCG I A +F+ + E+ V
Sbjct: 363 LSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSV 422
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
W+ +IGGLA HG A EM+R++V P+DITFIGLL+AC H G EG+M F+
Sbjct: 423 DHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFEL 482
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+R H +E K++HYGC+VD+LGRAG +++A N +EEMP +P+ IW SLLS+C+T+ +
Sbjct: 483 MRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESFN 542
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ E+L+ L+ +YVL SN+YA G+W DV ++R +++ K++KK PGCS IE+
Sbjct: 543 VGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELE 602
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELLAL 523
V F D + P I+ +L+ L++
Sbjct: 603 GHVYAFFVQDKSHPQFSGIYSILDSLSM 630
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 228/462 (49%), Gaps = 55/462 (11%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNS---GGDLAYASLLF------- 69
+L+ C+ L ++ +IH ++L ++ FL TK+I ++ + +A +F
Sbjct: 21 LLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFARFIFFRHHAFE 80
Query: 70 ----KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
++ +E + FL+NA+I+ Y++ H A+ L ML + DKFTL V+K
Sbjct: 81 FDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLMLENG-----AFADKFTLSLVLK 135
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+C+ + G QIH + K S +N L+ Y KC L+ A +VF+ M RD V+
Sbjct: 136 ACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVS 195
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYT--TIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
+N++I GY + G++ AR++FD +P ++SW ++I GY + + V Q+
Sbjct: 196 YNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQ---SEDGILVAWQLFAK 252
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA-LIEMYIKCGCINQ 302
E D IS S++ C + G +E + + + + R ++ A +I+ Y K G ++
Sbjct: 253 MPERDLISWNSMIDGCVKCGRMEDAQGLF-----DRMPNRDIVSWANMIDGYAKNGRVDI 307
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR-LKVPPNDITFIGLLSACA 361
A LFD+M ERDVV+++ ++GG +G +A+ +F+ MQ ++ T + LSA A
Sbjct: 308 ARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIA 367
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYG---------CLVDLLGRAGRLDQALNIIEEM 412
G ++G+ I IE G L+D+ + G ++ A+ + E +
Sbjct: 368 QLGHIDKGVA----------IHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENI 417
Query: 413 PMKPDAKIWGSLLSSCRTYSNLEIA---VIAMEHLLVLEPED 451
K W +++ + E+A ++ ME + V EP+D
Sbjct: 418 KEK-SVDHWNAIIGGLAIHGLGELAFDFLMEMERMRV-EPDD 457
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 277/481 (57%), Gaps = 12/481 (2%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVK--EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDP 107
T ++ C +G ++ A LF Q++ + +N+MI Y +N L+ A+++++ +L +
Sbjct: 213 TMIVGYCENG-NVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEE 271
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
I D FTL V+ +CA + GK++HA GL ++ AL+++Y KC++
Sbjct: 272 G----IEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCED 327
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP----YTTIVSWTAMISG 223
L A F+ +T+RD WN LISGYA Q++ + L KM + +W +ISG
Sbjct: 328 LKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISG 387
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
+ G AL +F +MQ + PD ++ +LPACA+L ++ G+ +H + +
Sbjct: 388 HVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELD 447
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
I AL++MY KCG I A Q+++++ ++VS + ++ A HG + I LF M
Sbjct: 448 VHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLG 507
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
P+ +TF+ +LS+C H G G +FD M +++ ++HY C+VDLL RAGRLD
Sbjct: 508 NGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTY-YNVTPSLKHYTCIVDLLSRAGRLD 566
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A +++++P KPD+ +WG+LL C + N+E+ IA E L+ LEP +TGNYVLL+N+YA
Sbjct: 567 EAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYA 626
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
GRW D+ R R++I+ + M K+PGCS IE ++ F+S D + +DI+ L+ L
Sbjct: 627 YAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLNT 686
Query: 524 H 524
H
Sbjct: 687 H 687
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 181/364 (49%), Gaps = 26/364 (7%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ +L+SC L K++H LK F+ TK++ + G L A+L+F ++ + N
Sbjct: 65 YASLLESCRTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRN 124
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++ + A++ + ++ + A++L++++ D I + F P V+K C GL LG
Sbjct: 125 LYSWTAILSVHVDHGYFEEALSLFEKLQLDD-----IGLEFFVFPVVLKLCGGLRVLELG 179
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+Q+H V K +C ++ A K+F + +++V++N +I GY
Sbjct: 180 RQLHGVVIK------------------RCADMGSALKIFSGFSVKNVVSYNTMIVGYCEN 221
Query: 197 GQMKKARMLFDKMPYT--TIVSWTAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEISIV 253
G ++KA+ LFD+M +SW +MISGY + EAL +FR + M GIE D ++
Sbjct: 222 GNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLG 281
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL ACA + SL G+ +H L T + AL+EMY KC + A FD + ER
Sbjct: 282 SVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTER 341
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +W+ +I G A + +L +M+ PN T+ G++S G L F
Sbjct: 342 DTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLF 401
Query: 374 DSMK 377
M+
Sbjct: 402 TEMQ 405
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 116/271 (42%), Gaps = 29/271 (10%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
IL +C L + K++H ++ + ++D+ G + +A ++ ++ PN
Sbjct: 419 ILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPN 478
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ NAM+ AY + I L++ ML G+ PD T V+ SC G
Sbjct: 479 LVSQNAMLTAYAMHGHGDEGIALFRNML-----GNGFRPDHVTFLSVLSSCVHAGAVETG 533
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR-DIVAWNNLISGYAR 195
+ + + + ++DL + L EA+++ +++ + D V W L+ G
Sbjct: 534 HEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVI 593
Query: 196 LGQMK----KARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEI 250
G ++ A L + P T ++ + + Y + G + + LD RQM + G+
Sbjct: 594 WGNVELGEIAAESLIELEPNNT-GNYVLLANLYAYAGRWHD-LDRTRQMIKDRGMHKS-- 649
Query: 251 SIVSVLPACAQLGSLELGEWIHMY--CDKNH 279
P C+ +E E IH++ CDK+H
Sbjct: 650 ------PGCSW---IEDREDIHVFLSCDKSH 671
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 174/504 (34%), Positives = 280/504 (55%), Gaps = 47/504 (9%)
Query: 26 NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIR 85
NL + +H +K S+ ++D+ + G+L A+ +F ++ + + + + I
Sbjct: 586 NLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIA 645
Query: 86 AYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK 145
AY LY AI L+ +M + PD +T+ ++ +CA G+ +H++V K
Sbjct: 646 AYVREGLYSDAIGLFDEM-----QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 700
Query: 146 FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML 205
G+ S+ NAL+++Y KC G +++AR++
Sbjct: 701 NGMGSNLPVTNALINMYAKC-------------------------------GSVEEARLV 729
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
F K+P IVSW MI GY+ EAL++F MQ +PD+I++ VLPACA L +L
Sbjct: 730 FSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAAL 788
Query: 266 ELGEWIHMYCDKNHLLRRTVICN-----ALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
+ G IH H+LRR + AL++MY KCG + A LFD + ++D++SW+
Sbjct: 789 DKGREIH-----GHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTV 843
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
+I G HG ++AI F+EM+ + P++ +F +L+AC+H+G NEG +F+SM+ +
Sbjct: 844 MIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNEC 903
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
+E K+EHY C+VDLL R G L +A IE MP+KPD IWG LLS CR + ++++A
Sbjct: 904 GVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKV 963
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQE 500
EH+ LEP++T YV+L+N+YA+ +WE+V ++RK ++ + K+ PGCS IEV +
Sbjct: 964 AEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNI 1023
Query: 501 FVSGDDTKPFLKDIFWLLELLALH 524
FV+G+ P K I LL L +
Sbjct: 1024 FVAGNSKHPQAKRIDVLLRKLTMQ 1047
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 220/451 (48%), Gaps = 62/451 (13%)
Query: 15 DRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
+ + +LQ C ++L + K++H+ I+ +S L K++ + + GDL +F +
Sbjct: 370 NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDK 429
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ VFL+N ++ Y + +++L+K+M + G+ +T V+K A L
Sbjct: 430 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNC-----YTFTCVLKCFAALG 484
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
K++H +V K G S++ N+L+ Y K + AH +F+E+++ D+V+WN++I+
Sbjct: 485 KVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMIN 544
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G +++G++ G L++F QM ++G+E D +
Sbjct: 545 G--------------------------CVVNGFSGNG-----LEIFIQMLILGVEVDLTT 573
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VSVL A A +G+L LG +H + K V N L++MY KCG +N A+++F +M
Sbjct: 574 LVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG 633
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+ +VSW++ I G AI LF EMQ V P+ T ++ ACA + ++G
Sbjct: 634 DTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG-- 691
Query: 372 YFDSMKRDHH-------IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
RD H + + L+++ + G +++A + ++P+K D W ++
Sbjct: 692 ------RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTM 744
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLE----PED 451
+ YS + A+E L ++ P+D
Sbjct: 745 IGG---YSQNSLPNEALELFLDMQKQFKPDD 772
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
F ++ + A I+ + +G A+++ + + E S SVL CA+ SL
Sbjct: 328 FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSK--SYELGLNSYCSVLQLCAEKKSL 385
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
E G+ +H N + + L+ MY+ CG + Q ++FD+++ V W+ ++
Sbjct: 386 EDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 445
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
A G +++ LF +MQ+L V N TF +L A G E KR H K
Sbjct: 446 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE-------CKRVHGYVLK 498
Query: 386 IEH------YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
+ L+ + G ++ A N+ +E+ +PD W S+++ C
Sbjct: 499 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGC 546
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 288/565 (50%), Gaps = 74/565 (13%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA--------YASLLFKQVKEPNVFLYN 81
L +IH IL++ L + L+T + C S A +A F + FL N
Sbjct: 33 LLQIHAFILRHSLHSNLNLLTAFVTTCASLAASAKRPLAIINHARRFFNATHTRDTFLCN 92
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
+MI A+ + L++ + R PD +T ++K CA + G +H
Sbjct: 93 SMIAAHFAARQFSQPFTLFRDLRRQ---APPFTPDGYTFTALVKGCATRVATGEGTLLHG 149
Query: 142 HVCKFGLKSHSITENALLDLY-------------------------------GKCDELIE 170
V K G+ AL+D+Y +C ++ E
Sbjct: 150 MVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCGDMSE 209
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGY------ 224
A ++F+EM DRDIVA+N +I GY ++G + AR LF++M +VSWT+M+SGY
Sbjct: 210 ARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDV 269
Query: 225 -------------------THIGSYAE------ALDVFRQMQMVGIEPDEISIVSVLPAC 259
IG Y + AL++FR+MQ +EP+E+++V VLPA
Sbjct: 270 ENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVLPAV 329
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A LG+L+LG WIH + + L R I ALI+MY KCG I +A F+ M ER+ SW+
Sbjct: 330 ADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERETASWN 389
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I G A +G A +A+ +F M PN++T IG+LSAC H G EG +F++M+R
Sbjct: 390 ALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAMER- 448
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVI 439
I ++EHYGC+VDLLGRAG LD+A N+I+ MP + I S L +C ++++ A
Sbjct: 449 FGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFNDVLRAER 508
Query: 440 AMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQ 499
++ ++ ++ + GNYV+L N+YA RW DV ++++++ + K CS+IE+
Sbjct: 509 VLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVACSVIEIGGSFI 568
Query: 500 EFVSGDDTKPFLKDIFWLLELLALH 524
EF +GD L+ I L L+ H
Sbjct: 569 EFAAGDYLHSHLEVIQLTLGQLSKH 593
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 277/512 (54%), Gaps = 22/512 (4%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+ S ++ L++IH +L S + S L+YA LL Q + +
Sbjct: 23 VAASSQSQFRLREIHAHLLVSGRLASPSHHADFVASLASSSHLSYARLLLPQ-RPATLLA 81
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL-------C 132
+N ++RA GLA ++++ + PD ++ F++++ L
Sbjct: 82 HNGLLRALARGPCPGLAFAAFRELP--------LAPDHYSFTFLVRAATSLAAAASATPV 133
Query: 133 PS------LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186
P+ L +HA + G + ++ + +Y ++ F E+ D+V
Sbjct: 134 PTDVAVNLLAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVVCV 193
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
++ + G + AR LFD MP V+W AM++GY +G EAL +F +MQ G+
Sbjct: 194 TAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVA 253
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
E+++VSVL ACAQ+G+LE G W+H Y + + AL++MY KCG + + ++
Sbjct: 254 VSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEV 313
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
F+ M ER++ +W++ + GLA +G + + LF M+ + PN +TF+ +L C+ G
Sbjct: 314 FETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLV 373
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
EG FDSMK H +E +EHYGC+VDL GRAGRLD A++ I MP++P +WG+LL+
Sbjct: 374 EEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLN 433
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
+ R ++N+++ AM L +E ++ +VLLSNIYA+ W+ VS++R +++SK +KK
Sbjct: 434 ASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKM 493
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
PGCS IEV+ +V EF G + P KDI +L
Sbjct: 494 PGCSAIEVDGKVHEFFVGSKSHPRYKDIQTML 525
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 262/464 (56%), Gaps = 36/464 (7%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
+ID+ D+ A +F Q ++ + AMI Y N + A+ +++ +L++
Sbjct: 291 LIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER---- 346
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
+ + TL V+ +CAGL +LGK++H H+ K G +A++D+Y KC L A
Sbjct: 347 -MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLA 405
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
H+ F ++D+D V W +MI+ + G
Sbjct: 406 HQTFIGISDKDAVC-------------------------------WNSMITSCSQNGKPE 434
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EA+D+FRQM M G + D +SI + L ACA L +L G+ IH + + +ALI
Sbjct: 435 EAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALI 494
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
+MY KCG ++ A ++FD M E++ VSW+++I NHG+ +++LFH M + P+ +
Sbjct: 495 DMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHV 554
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
TF+ ++SAC H G +EG+ YF M + I ++EHY C+VDL GRAGRL++A +I
Sbjct: 555 TFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINS 614
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MP PDA +WG+LL +CR + N+E+A +A +L L+P+++G YVLLSN++A G+WE V
Sbjct: 615 MPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESV 674
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
++R L++ + ++K PGCS I+VNN FV+ D + P I+
Sbjct: 675 LKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 718
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 197/440 (44%), Gaps = 55/440 (12%)
Query: 8 LSIKELEDR--FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL 62
L L D+ F ++++C L + + +H +I F+ + +I + G +
Sbjct: 139 LGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCI 198
Query: 63 AYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPF 122
A LF ++ + L+N M+ Y N + A ++ +M R P+ T
Sbjct: 199 HDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETN-----PNSVTFAC 253
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN--ALLDLYGKCDELIEAHKVFEEMTD 180
V+ CA + + G Q+H V GL+ S N AL+D+Y KC
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKC--------------- 298
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+ + AR +FD+ IV TAMISGY G AL++FR +
Sbjct: 299 RDV----------------EMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWL 342
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ + +++ SVLPACA L +L LG+ +H + KN + +A+++MY KCG +
Sbjct: 343 LQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRL 402
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+ A Q F + ++D V W+++I + +GK +AI LF +M + ++ LSAC
Sbjct: 403 DLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 462
Query: 361 A-----HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
A H G M + + D E L+D+ + G LD A + + M K
Sbjct: 463 ANLPALHYGKEIHAFMMRGAFRSDLFAESA------LIDMYSKCGNLDLACRVFDTMEEK 516
Query: 416 PDAKIWGSLLSSCRTYSNLE 435
+ W S++++ + L+
Sbjct: 517 NEVS-WNSIIAAYGNHGRLK 535
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 194/442 (43%), Gaps = 63/442 (14%)
Query: 12 ELEDRFVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
L + V ILQ+C + L + ++ H Q+L + + L TK++ + G A +
Sbjct: 44 SLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNI 103
Query: 69 FKQVK----EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
F Q++ EP +N MIR +T + A+ Y +ML G LPDK+T P+VI
Sbjct: 104 FYQLRLWCSEP----WNWMIRGFTMMGQFDFALLFYFKML-----GCGTLPDKYTFPYVI 154
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
K+C GL +LG+ +H + G + ++L+ Y + + +A +F+ M +D V
Sbjct: 155 KACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGV 214
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
WN +++GY + G + A VF +M+
Sbjct: 215 LWNVMLNGYVK-------------------------------NGDWDNATGVFMEMRRTE 243
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN--ALIEMYIKCGCINQ 302
P+ ++ VL CA + G +H + L + + N ALI++Y KC +
Sbjct: 244 TNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEM 303
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
A ++FDQ D+V + +I G +G + A+ +F + + ++ N +T +L ACA
Sbjct: 304 ARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACA- 362
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYG------CLVDLLGRAGRLDQALNIIEEMPMKP 416
GL K H K H G ++D+ + GRLD A + K
Sbjct: 363 ------GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK- 415
Query: 417 DAKIWGSLLSSCRTYSNLEIAV 438
DA W S+++SC E A+
Sbjct: 416 DAVCWNSMITSCSQNGKPEEAI 437
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 169/372 (45%), Gaps = 49/372 (13%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L +C L L K++H ILK S ++ + ++D+ G L A F + + +
Sbjct: 357 VLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKD 416
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+N+MI + + N AI+L++QM G+ D ++ + +CA L G
Sbjct: 417 AVCWNSMITSCSQNGKPEEAIDLFRQM---GMAGTKY--DCVSISAALSACANLPALHYG 471
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K+IHA + + +S E+AL+D+Y KC L A +VF+ M +++ V+WN++I+ Y
Sbjct: 472 KEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNH 531
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
G++K + LF M I V++ A+IS H G E + FR M +E+ I
Sbjct: 532 GRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMT------EELGI 585
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-V 311
++ + H C +++++ + G +N+A + + M
Sbjct: 586 MARME--------------HYAC--------------MVDLFGRAGRLNEAFGMINSMPF 617
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
D W T++G HG A + L P N ++ L + A+ G W E ++
Sbjct: 618 SPDAGVWGTLLGACRLHGNVELAEVASRNLFDLD-PQNSGYYVLLSNVHANAGQW-ESVL 675
Query: 372 YFDSMKRDHHIE 383
S+ ++ ++
Sbjct: 676 KIRSLMKERGVQ 687
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 271/464 (58%), Gaps = 6/464 (1%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L A L Q E NV + ++I Y+ A+ + ML D + PD+
Sbjct: 183 GLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDG-----VEPDEVA 237
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM- 178
+ + +C+ L G+ +H V K ++ L+D+Y KC ++ +A VF+ +
Sbjct: 238 VIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVG 297
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+ WN +I GY +LG + AR LFD+M ++++ +MI+GY H G +AL +F
Sbjct: 298 RGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFM 357
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
Q++ G+ D ++VS+L ACA LG+L G +H ++ + + AL++MY+KCG
Sbjct: 358 QLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCG 417
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+++A+ +F +M ERDV +WS +I GLA +G A+ F +M+R P +T+I +L+
Sbjct: 418 RVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLT 477
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H+ NEG +F+ M+ H + +IEHYGC++DLL R+G LD+A+++++ MPM+P+A
Sbjct: 478 ACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNA 537
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
IW S+LS+CR + N+++A A EHLL L PE+ YV L NIY +W + R+R L+
Sbjct: 538 VIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLM 597
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+ +KKT G S I V +V +FV D + P+ +I ++E +A
Sbjct: 598 EEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEIA 641
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 196/415 (47%), Gaps = 39/415 (9%)
Query: 45 SNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML 104
+ L+ + + ++ L Y LF ++ P FL++ +RA L A + ++
Sbjct: 34 AEHLLNSLTNCLSAPRHLRYVLSLFDRLPHPTTFLHDTALRAC----LQASAGADHPVLI 89
Query: 105 RDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS-ITENALLDLYG 163
+ FT FV + CA L + +HA + L S + I N L+ +Y
Sbjct: 90 LRRMRRGGVRMSAFTFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYA 149
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
+A + F+E+ +D V W +I G R G + +AR L + P +VSWT++I+G
Sbjct: 150 SLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAG 209
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
Y+ G A+A+ F M G+EPDE++++ L AC++L +LE G +H+ K +
Sbjct: 210 YSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMT 269
Query: 284 TVICNALIEMYIKCGCINQAS--------------------------------QLFDQMV 311
+ LI+MY KCG I QA LFDQM
Sbjct: 270 DKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMG 329
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
RDV++++++I G + G+ A+ LF +++R + ++ T + LL+ACA G +G
Sbjct: 330 ARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRA 389
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
S+++ +E + LVD+ + GR+D+A + M + D W ++++
Sbjct: 390 LHASIEQ-RIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGER-DVHTWSAMIA 442
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 153/386 (39%), Gaps = 74/386 (19%)
Query: 21 LQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV----- 72
L +C L L + +H + K + ++ LV +ID+ GD+A A +F V
Sbjct: 242 LSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQK 301
Query: 73 KEP---------------------------NVFLYNAMIRAYTNNHLYGLAINLYKQMLR 105
EP +V +N+MI Y ++ A+ L+ Q+ R
Sbjct: 302 PEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRR 361
Query: 106 DPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
+ D FT+ ++ +CA L G+ +HA + + ++ AL+D+Y KC
Sbjct: 362 HG-----MRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKC 416
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
+ EA VF M +RD+ W +AMI+G
Sbjct: 417 GRVDEATAVFHRMGERDVHTW-------------------------------SAMIAGLA 445
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
G +AL+ F QM+ G +P ++ ++VL AC+ L G H L +
Sbjct: 446 FNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQI 505
Query: 286 I-CNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+I++ + G +++A L M ++ + V W++++ H A H + +
Sbjct: 506 EHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLK 565
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEG 369
L P D ++ L + + W E
Sbjct: 566 L-APEEDAVYVQLYNIYIDSRQWVEA 590
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 12/181 (6%)
Query: 18 VPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V +L +C +L L + +H I + ++ + +LVT ++D+ G + A+ +F ++ E
Sbjct: 372 VSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGE 431
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+V ++AMI N + A+ + QM RD P T V+ +C+ +
Sbjct: 432 RDVHTWSAMIAGLAFNGMGMDALESFCQMKRDG-----FQPTSVTYIAVLTACSHSSLLN 486
Query: 135 LGKQIHAHVCKFGLKSHSITEN--ALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
G+Q H + + K H E+ ++DL + L EA + + M + V W +++S
Sbjct: 487 EGRQ-HFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILS 545
Query: 192 G 192
Sbjct: 546 A 546
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/523 (34%), Positives = 287/523 (54%), Gaps = 40/523 (7%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+ IL +C + LK+ I I++ + + T ++ + G L A +F+++
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS 475
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ NV +NAMI AY + Y A+ ++ +L++ I P+ T ++ C
Sbjct: 476 KQNVVAWNAMITAYVQHEQYDNALATFQALLKEG-----IKPNSSTFTSILNVCKSSDSL 530
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LGK +H + K GL+S NAL+ ++ C +L+
Sbjct: 531 ELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMS----------------------- 567
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ LF+ MP +VSW +I+G+ G A D F+ MQ GI+PD+I+
Sbjct: 568 --------AKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFT 619
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+L ACA +L G +H + ++ LI MY KCG I A Q+F ++ ++
Sbjct: 620 GLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKK 679
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+V SW+++I G A HG+ +A+ LF++MQ+ V P+ ITF+G LSACAH G EGL +F
Sbjct: 680 NVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHF 739
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SMK + +IE ++EHYGC+VDL GRAG L++A+ I +M ++PD+++WG+LL +C+ + N
Sbjct: 740 QSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLN 798
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A A + L L+P D G +V+LSNIYA G W++V++MRK++ + + K PG S IE
Sbjct: 799 VELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIE 858
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
V+ +V F S D T P ++I LE L + + V D Y
Sbjct: 859 VDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRY 901
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 222/454 (48%), Gaps = 59/454 (12%)
Query: 4 RIGALSIKELEDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
R+ + I+ + +LQ C +NL + ++I+ I K + F+ +I++ G
Sbjct: 100 RVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCG 159
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+ A +F ++E +V+ +N ++ Y + LY A L++QM++D + PDK T
Sbjct: 160 NTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS-----VKPDKRTF 214
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
++ +CA G++++ + K G + AL++++ KC ++ +A KVF+ +
Sbjct: 215 VSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT 274
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+V W ++I+G AR G+ K +A ++F++M
Sbjct: 275 RDLVTWTSMITGLARHGRFK-------------------------------QACNLFQRM 303
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ G++PD+++ VS+L AC +LE G+ +H + + A++ MY KCG +
Sbjct: 304 EEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSM 363
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A ++FD + R+VVSW+ +I G A HG+ +A F++M + PN +TF+ +L AC
Sbjct: 364 EDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGAC 423
Query: 361 AHTGFWNEGLMYFDSMKRDHHIE-HKIEH-YG-------CLVDLLGRAGRLDQALNIIEE 411
+ ++KR I+ H IE YG L+ + + G L A + E+
Sbjct: 424 SSP----------SALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK 473
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+ K + W +++++ + + A+ + LL
Sbjct: 474 IS-KQNVVAWNAMITAYVQHEQYDNALATFQALL 506
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 189/414 (45%), Gaps = 41/414 (9%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L++C E L + KK+H ++ + ++ T ++ + G + A +F VK
Sbjct: 315 FVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK 374
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
NV + AMI + + A + +M+ S I P++ T ++ +C+
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE-----SGIEPNRVTFMSILGACSSPSAL 429
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+QI H+ + G S ALL +Y KC
Sbjct: 430 KRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC---------------------------- 461
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G +K A +F+K+ +V+W AMI+ Y Y AL F+ + GI+P+ +
Sbjct: 462 ---GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFT 518
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L C SLELG+W+H K L + NAL+ M++ CG + A LF+ M +R
Sbjct: 519 SILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR 578
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+T+I G HGK A F MQ + P+ ITF GLL+ACA EG
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG-RRL 637
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
++ + + + L+ + + G ++ A + ++P K + W S+++
Sbjct: 638 HALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITG 690
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 175/369 (47%), Gaps = 40/369 (10%)
Query: 154 TENALLDLYGKCDELIEAHKVFEEMTDR----DIVAWNNLISGYARLGQMKKARMLFDKM 209
T +ALL L K L + +++ + DI WN LI+ YA+ G A+ +FD M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
+ SW ++ GY G Y EA + QM ++PD+ + VS+L ACA +++ G
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
++ K + ALI M+IKCG I A+++FD + RD+V+W+++I GLA HG
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR---DHHI---- 382
+ +A +LF M+ V P+ + F+ LL AC H +G MK D I
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351
Query: 383 ------------EHKIE-----------HYGCLVDLLGRAGRLDQA---LNIIEEMPMKP 416
E +E + ++ + GR+D+A N + E ++P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPEDTGNYVLLSNIYAKHGRWEDVSRM 474
+ + S+L +C + S L+ +H++ +D LLS +YAK G +D R+
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS-MYAKCGSLKDAHRV 470
Query: 475 RKLIRSKSM 483
+ I +++
Sbjct: 471 FEKISKQNV 479
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 167/368 (45%), Gaps = 49/368 (13%)
Query: 9 SIKELEDRFVPILQSCE--NLIELKK-IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
IK F IL C+ + +EL K +H I+K L + ++ + + GDL A
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF + + ++ +N +I + + +A + +K M S I PDK T ++
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE-----SGIKPDKITFTGLLN 623
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA + G+++HA + + + L+ +Y KC + +AH+VF ++ +++ +
Sbjct: 624 ACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYS 683
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W ++I+GYA+ G+ K EAL++F QMQ G+
Sbjct: 684 WTSMITGYAQHGRGK-------------------------------EALELFYQMQQEGV 712
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+PD I+ V L ACA G +E G + ++ R +++++ + G +N+A +
Sbjct: 713 KPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVE 772
Query: 306 LFDQM-VERDVVSWSTVIGGLANHGK---AHKAIHLFHEMQRLKVPPNDI-TFIGLLSAC 360
+M VE D W ++G H A KA ++L++ PND F+ L +
Sbjct: 773 FIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQ-----KKLELDPNDNGVFVILSNIY 827
Query: 361 AHTGFWNE 368
A G W E
Sbjct: 828 AAAGMWKE 835
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 36/301 (11%)
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
A+++ + G + EA+ V ++ I+ + ++L C + +L GE I+ + K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + + N LI MY KCG A Q+FD M E+DV SW+ ++GG HG +A L
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR--------------DHHIE 383
+M + V P+ TF+ +L+ACA ++G ++ + + + HI+
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 384 ----------------HKIEHYGCLVDLLGRAGRLDQALNI---IEEMPMKPDAKIWGSL 424
+ + ++ L R GR QA N+ +EE ++PD + SL
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV--LLSNIYAKHGRWEDVSRMRKLIRSKS 482
L +C LE + + DT YV + ++Y K G ED + L++ ++
Sbjct: 319 LRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377
Query: 483 M 483
+
Sbjct: 378 V 378
>gi|414879991|tpg|DAA57122.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 868
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 266/422 (63%), Gaps = 17/422 (4%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYK---QMLRDPRTGSLILPDKFTLPFVI 124
+F Q P + A ++AY++ A++L+K Q L D D F FV+
Sbjct: 440 VFDQSPAP----WRAFLKAYSHGPFPLEALHLFKHARQHLAD---------DTFVFTFVL 486
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
K+CAGL G Q+HA V + G + H+ AL+++Y L+EA KVF+EM +++V
Sbjct: 487 KACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVV 546
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
+WN +I+G+A G+++ AR+LFD+MP +VSWT +I GYT YAEAL + R M G
Sbjct: 547 SWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGG 606
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
I P EI++++V+PA + LG + +GE ++ YC+K ++ + N+LI++Y K G + +
Sbjct: 607 ISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSL 666
Query: 305 QLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
++FD+M++ R++VSW+++I G A HG + +A+ LF EM+R + PN ITF+ +++AC+H
Sbjct: 667 KVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHG 726
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G +GL +F SM +++I+ +I+H+GC++D+LGRAGRL +A IIE +PM+ + +W
Sbjct: 727 GLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRI 786
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL C Y + + A++ + LE E G++ +LSN+ + GR+ D + RKL+ + +
Sbjct: 787 LLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKI 846
Query: 484 KK 485
K
Sbjct: 847 VK 848
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 157/330 (47%), Gaps = 48/330 (14%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
++ C L+E +K+ ++ + N ++T G++ YA LLF Q+ NV
Sbjct: 525 VMSRC--LVEARKVFDEMPVKNVVSWNVMITGFA----GWGEVEYARLLFDQMPCRNVVS 578
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+ +I YT LY A+ L + M+ I P + T+ VI + + L +G+ +
Sbjct: 579 WTGLIDGYTRACLYAEALTLLRHMM-----AGGISPSEITVLAVIPAISNLGGILMGEML 633
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD-RDIVAWNNLISGYARLGQ 198
+ + K G+ S + N+L+DLY K + + KVF+EM D R++V+W ++ISG+A G
Sbjct: 634 NGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGL 693
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
EAL++F +M+ GI+P+ I+ +SV+ A
Sbjct: 694 S-------------------------------VEALELFAEMRRAGIKPNRITFLSVINA 722
Query: 259 CAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVV 316
C+ G +E G + + ++ +I+M + G + +A Q+ + + +E +V
Sbjct: 723 CSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVT 782
Query: 317 SWSTVIGGLANHGK---AHKAIHLFHEMQR 343
W ++G + +G+ +AI + +++R
Sbjct: 783 VWRILLGCCSKYGEVAMGERAIKMISDLER 812
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 273/501 (54%), Gaps = 40/501 (7%)
Query: 18 VPILQSCEN--LIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V + C + LI L + +H+ +K S+ + ++D+ + GDL A +F+++ +
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+V Y +MI Y L G A+ L+++M + I PD +T+ V+ CA
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-----ISPDVYTVTAVLNCCARYRLLD 414
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK++H + + L NAL+D+Y A
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMY-------------------------------A 443
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIV 253
+ G M++A ++F +M I+SW +I GY+ EAL +F + + PDE ++
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
VLPACA L + + G IH Y +N + N+L++MY KCG + A LFD + +
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 563
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+ +I G HG +AI LF++M++ + ++I+F+ LL AC+H+G +EG +F
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 623
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ M+ + IE +EHY C+VD+L R G L +A IE MP+ PDA IWG+LL CR + +
Sbjct: 624 NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHD 683
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+++A E + LEPE+TG YVL++NIYA+ +WE V R+RK I + ++K PGCS IE
Sbjct: 684 VKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Query: 494 VNNEVQEFVSGDDTKPFLKDI 514
+ V FV+GD + P ++I
Sbjct: 744 IKGRVNIFVAGDSSNPETENI 764
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 180/376 (47%), Gaps = 40/376 (10%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GDL AS +F +VK +N ++ + + +I L+K+M+ S + D +T
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM-----SSGVEMDSYT 197
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
V KS + L G+Q+H + K G + N+L+ Y K + A KVF+EMT
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+RD+++WN++I+GY G +K L VF Q
Sbjct: 258 ERDVISWNSIINGYVSNGLAEK-------------------------------GLSVFVQ 286
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M + GIE D +IVSV CA + LG +H K R CN L++MY KCG
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++ A +F +M +R VVS++++I G A G A +A+ LF EM+ + P+ T +L+
Sbjct: 347 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
CA +EG + +K ++ + I L+D+ + G + +A + EM +K D
Sbjct: 407 CARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DII 464
Query: 420 IWGSLLS--SCRTYSN 433
W +++ S Y+N
Sbjct: 465 SWNTIIGGYSKNCYAN 480
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y G +K+A +FD++ + W +++ G ++ ++ +F++M G+E D +
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V + + L S+ GE +H + K+ R + N+L+ Y+K ++ A ++FD+M E
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
RDV+SW+++I G ++G A K + +F +M + + T + + + CA + + G
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA- 317
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
S+ + L+D+ + G LD A + EM
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D ++ SVL CA SL+ G+ + + N + + + + L MY CG + +AS++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA-----CAH 362
D++ + W+ ++ LA G +I LF +M V + TF + + H
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G G + + + + LV + R+D A + +EM + D W
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNS------LVAFYLKNQRVDSARKVFDEMTER-DVISWN 265
Query: 423 SLLS 426
S+++
Sbjct: 266 SIIN 269
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 274/508 (53%), Gaps = 40/508 (7%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+L++C L LK +IH QIL + + + + +++V GDL AS + +Q++
Sbjct: 190 LTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR 249
Query: 74 EPN-------------------------------VFLYNAMIRAYTNNHLYGLAINLYKQ 102
EP+ V L+N+MI Y N++ A+ L+ +
Sbjct: 250 EPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNE 309
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M + R D TL VI +C GL GKQ+H H CKFGL + + LLD+Y
Sbjct: 310 MRNETR------EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
KC +EA K+F E+ D + N++I Y G++ A+ +F+++ +++SW +M +
Sbjct: 364 SKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTN 423
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
G++ G E L+ F QM + + DE+S+ SV+ ACA + SLELGE + L
Sbjct: 424 GFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDS 483
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
V+ ++LI++Y KCG + ++FD MV+ D V W+++I G A +G+ +AI LF +M
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMS 543
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+ P ITF+ +L+AC + G EG F+SMK DH EH+ C+VDLL RAG +
Sbjct: 544 VAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYV 603
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIY 462
++A+N++EEMP D +W S+L C + A E ++ LEPE++ YV LS I+
Sbjct: 604 EEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIF 663
Query: 463 AKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
A G WE + +RKL+R ++ K PG S
Sbjct: 664 ATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 196/408 (48%), Gaps = 52/408 (12%)
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
G+L+ A LF + E +V N+++ Y N A+ L+K++ D
Sbjct: 137 AGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN--------FSADAI 188
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
TL V+K+CA L GKQIHA + G++ S ++L+++Y KC +L A + E++
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+ D + + LISGYA G++ ++R LFD+ ++ W +MISGY EAL +F
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+M+ E D ++ +V+ AC LG LE G+ +H + K L+ V+ + L++MY KCG
Sbjct: 309 EMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 299 C-------------------------------INQASQLFDQMVERDVVSWSTVIGGLAN 327
I+ A ++F+++ + ++SW+++ G +
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD-----SMKRDHHI 382
+G + + FH+M +L +P ++++ ++SACA G F + D +
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVV 487
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
L+DL + G ++ + + M +K D W S++S T
Sbjct: 488 SSS------LIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYAT 528
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 157/350 (44%), Gaps = 76/350 (21%)
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
MI Y +++ + L+ + + M D R + L ++SC+ +L +Q +
Sbjct: 1 MILKYNSSYRFYLSSSFLQAMEVDCRRYYVRL---------LQSCSSRNRETLWRQTNGL 51
Query: 143 VCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI----------- 190
+ K G L S I N LL +Y + ++ A +F+EM DR+ +WN +I
Sbjct: 52 LLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGT 111
Query: 191 --------------------SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
SG+A+ G++ AR LF+ MP +V+ +++ GY G
Sbjct: 112 SLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYA 171
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH-------MYCD---KNHL 280
EAL +F+++ D I++ +VL ACA+L +L+ G+ IH + CD + L
Sbjct: 172 EEALRLFKELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 281 LRRTVIC---------------------NALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
+ C +ALI Y CG +N++ LFD+ R V+ W+
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWN 288
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
++I G + +A+ LF+EM R + + T +++AC GF G
Sbjct: 289 SMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETG 337
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/498 (35%), Positives = 276/498 (55%), Gaps = 32/498 (6%)
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQML-RD----------------PRTG-------- 110
+VF+ NA+I AY A ++ ++ RD PR G
Sbjct: 112 DVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMG 171
Query: 111 -SLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
S + P+ T+ ++ +CA L GK+IH + G+ + +AL+ LY KC +
Sbjct: 172 WSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVR 231
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYT 225
EA VF+ M RD+V+WN +++ Y + + +K LF KM + +W A+I G
Sbjct: 232 EARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCM 291
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
G EA+++FR+MQ +G +P+EI+I S+LPAC+ +L +G+ IH Y ++ +
Sbjct: 292 ENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLT 351
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
AL+ MY KCG +N + +FD M +DVV+W+T+I A HG +A+ LF +M +
Sbjct: 352 STTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSR 411
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
V PN +TF G+LS C+H+ EG+ F+SM RDH +E HY C+VD+ RAGRL++A
Sbjct: 412 VQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA 471
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
I+ MPM+P A WG+LL++CR Y N+E+A I+ + L +EP + GNYV L NI
Sbjct: 472 YKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTA 531
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQ 525
W + S++R L++ + + KTPGCS ++V N+V FV GD + I+ L+ L
Sbjct: 532 KMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKM 591
Query: 526 DRA--KDVIDIMYEDIGE 541
A K D + +DI +
Sbjct: 592 KMAGYKPDTDYVLQDIDQ 609
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 15/316 (4%)
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
LI +G +AR LFD +P + + +IS T G EA+ ++ +Q GI+PD
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++ ACA G + +H + ++ + NALI Y KC C+ A ++FD
Sbjct: 78 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+V RDVVSW+++ G K + +F EM V PN +T +L ACA
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS- 427
G R H + + LV L + + +A + + MP + D W +L++
Sbjct: 198 GKEIHGFAVR-HGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTAY 255
Query: 428 --CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+ Y + M V E T N V+ + ++GR E+ M + ++ K
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCM--ENGRSEEAVEMFRKMQKMGFKP 313
Query: 486 T--------PGCSLIE 493
P CS E
Sbjct: 314 NEITISSILPACSFSE 329
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 260/469 (55%), Gaps = 6/469 (1%)
Query: 53 IDVCNSGGDLAY-ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
I VC S ++ LF ++ E +V +I + H Y A+ L+ +ML
Sbjct: 39 IKVCRSKSNIRMDVDELFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLN---- 94
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
I P++FT VI S GL LGKQ+HA K GL + +A+LD Y K EA
Sbjct: 95 -IKPNEFTFATVIHSSTGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEA 153
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
FE++ ++V++ LI GY + G++ A LF +MP +VSW AM+ G++ +G
Sbjct: 154 RNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNE 213
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EA+ +F +M G P++ + + + A + SL +G+ H K+ +CN+L+
Sbjct: 214 EAVSLFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLV 273
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
Y KCG + + +F+++ +R+ VSW+ VI G A +G+ A+ F M+ + PN +
Sbjct: 274 SFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSV 333
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +GLL AC H G +G MYF+ M+++ K EHY C+VDLL R GRL +A + +
Sbjct: 334 TLLGLLCACNHAGLVEKGYMYFNQMRQEEPGILKPEHYACMVDLLSRFGRLKEAAKFLHD 393
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
+P P W +LL C +SN E++ +A + +L L+PED +YV+LSN Y+ GRW+ V
Sbjct: 394 LPFDPGTGFWKALLGGCHIHSNAELSDLAAQKILALDPEDVSSYVMLSNAYSAAGRWQQV 453
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLEL 520
S +R+ ++ K +K+ PGCS IEV +++ F++ D ++I+ L+
Sbjct: 454 STIRREMKEKGLKRIPGCSWIEVRSKIHVFLNSDKNHHQKEEIYSFLKF 502
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 125/297 (42%), Gaps = 47/297 (15%)
Query: 7 ALSIKELEDRFVP-------ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVC 56
+L I+ L + F+P + S N+ L K H +K L + F+ ++
Sbjct: 217 SLFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFY 276
Query: 57 NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPD 116
G + + L+F ++ + N +NA+I + N A+ +++M R L P+
Sbjct: 277 AKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFERM----RAAGL-RPN 331
Query: 117 KFTLPFVIKSC--AGLLCPSLGKQIHAHVCKFGLKSHSITE----NALLDLYGKCDELIE 170
TL ++ +C AGL+ ++ + + + + I + ++DL + L E
Sbjct: 332 SVTLLGLLCACNHAGLV-----EKGYMYFNQMRQEEPGILKPEHYACMVDLLSRFGRLKE 386
Query: 171 AHKVFEEMT-DRDIVAWNNLISG-----YARLGQMKKARMLFDKMPYTTIVSWTAMISGY 224
A K ++ D W L+ G A L + ++L + + S+ + + Y
Sbjct: 387 AAKFLHDLPFDPGTGFWKALLGGCHIHSNAELSDLAAQKIL--ALDPEDVSSYVMLSNAY 444
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY--CDKNH 279
+ G + + + R+M+ G++ +P C+ +E+ IH++ DKNH
Sbjct: 445 SAAGRWQQVSTIRREMKEKGLKR--------IPGCSW---IEVRSKIHVFLNSDKNH 490
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 269/445 (60%), Gaps = 9/445 (2%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
EPN+ +N ++ + + + A+ ++++M PD+ T+ V+ S
Sbjct: 214 EPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLG-----FCPDQVTVSSVLPSVGDSENL 268
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
++G+QIH +V K GL +A+LD+YGK + K+F+E + N I+G
Sbjct: 269 NMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGL 328
Query: 194 ARLGQMKKARMLF----DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+R G + KA +F ++ +VSWT++I+G G EAL++FR+MQ+ G++P+
Sbjct: 329 SRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNR 388
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++I S+LPAC + +L G H + + HLL + +ALI+MY KCG I + +F+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNM 448
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M +++V W++++ G + HGKA + + +F + R ++ P+ I+F LLSAC G +EG
Sbjct: 449 MPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF+ M ++ I+ ++EHY C+V+LLGRAG+L +A ++I+E+P +PD+ +WG+LL+SCR
Sbjct: 509 WKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCR 568
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+N+++A IA + L LEPE+ G YVL+SNIYA G W +V +R + S +KK PGC
Sbjct: 569 LQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDI 514
S I+V N+V ++ D + P + I
Sbjct: 629 SWIQVKNKVYTLLACDKSHPQIDQI 653
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 225/470 (47%), Gaps = 50/470 (10%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
+ H +ILK ++ K+I ++ A L+ + + +P V+ ++++I A T
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
L+ +I ++ +M ++PD LP + K CA L GKQIH C GL
Sbjct: 96 LFSQSIGVFSRMFSHG-----LIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMD 150
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
+ + +L +Y +C + +A KVF+ M+++D+V + L+ GYAR G +++ + +M
Sbjct: 151 AFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEK 210
Query: 212 T----TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
+ IVSW ++SG+ G + EA+ +F++M +G PD++++ SVLP+ +L +
Sbjct: 211 SGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNM 270
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD------------------- 308
G IH Y K LL+ + +A+++MY K G + +LFD
Sbjct: 271 GRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSR 330
Query: 309 ----------------QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
Q +E +VVSW+++I G A +GK +A+ LF EMQ V PN +T
Sbjct: 331 NGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVT 390
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-CLVDLLGRAGRLDQALNIIEE 411
+L AC + G R H ++ H G L+D+ + GR+ + +
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDDV--HVGSALIDMYAKCGRIKMSQIVFNM 448
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL--VLEPEDTGNYVLLS 459
MP K + W SL++ + + + E L+ L+P+ LLS
Sbjct: 449 MPTK-NLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 273/501 (54%), Gaps = 40/501 (7%)
Query: 18 VPILQSCEN--LIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V + C + LI L + +H+ +K S+ + ++D+ + GDL A +F+++ +
Sbjct: 149 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 208
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+V Y +MI Y L G A+ L+++M + I PD +T+ V+ CA
Sbjct: 209 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-----ISPDVYTVTAVLNCCARYRLLD 263
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK++H + + L NAL+D+Y A
Sbjct: 264 EGKRVHEWIKENDLGFDIFVSNALMDMY-------------------------------A 292
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIV 253
+ G M++A ++F +M I+SW +I GY+ EAL +F + + PDE ++
Sbjct: 293 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 352
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
VLPACA L + + G IH Y +N + N+L++MY KCG + A LFD + +
Sbjct: 353 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 412
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+ +I G HG +AI LF++M++ + ++I+F+ LL AC+H+G +EG +F
Sbjct: 413 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 472
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ M+ + IE +EHY C+VD+L R G L +A IE MP+ PDA IWG+LL CR + +
Sbjct: 473 NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHD 532
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+++A E + LEPE+TG YVL++NIYA+ +WE V R+RK I + ++K PGCS IE
Sbjct: 533 VKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 592
Query: 494 VNNEVQEFVSGDDTKPFLKDI 514
+ V FV+GD + P ++I
Sbjct: 593 IKGRVNIFVAGDSSNPETENI 613
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 174/367 (47%), Gaps = 40/367 (10%)
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F +VK +N ++ + + +I L+K+M+ S + D +T V KS +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM-----SSGVEMDSYTFSCVSKSFS 55
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
L G+Q+H + K G + N+L+ Y K + A KVF+EMT+RD+++WN+
Sbjct: 56 SLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNS 115
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+I+GY G +K L VF QM + GIE D
Sbjct: 116 IINGYVSNGLAEK-------------------------------GLSVFVQMLVSGIEID 144
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+IVSV CA + LG +H K R CN L++MY KCG ++ A +F
Sbjct: 145 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 204
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M +R VVS++++I G A G A +A+ LF EM+ + P+ T +L+ CA +E
Sbjct: 205 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 264
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS-- 426
G + +K ++ + I L+D+ + G + +A + EM +K D W +++
Sbjct: 265 GKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGY 322
Query: 427 SCRTYSN 433
S Y+N
Sbjct: 323 SKNCYAN 329
>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/485 (35%), Positives = 284/485 (58%), Gaps = 14/485 (2%)
Query: 57 NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPD 116
N D+ YA ++ +P + +N +IR ++N+ +I++Y QMLR +LPD
Sbjct: 799 NVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFG-----LLPD 853
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
T PF++KS + L LG +H V K GL+ N L+ +YG + A K+F+
Sbjct: 854 HMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFD 913
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
EM +++V WN+++ YA+ G + AR++FD+M +V+W++MI GY G Y +AL++
Sbjct: 914 EMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEI 973
Query: 237 FRQMQMVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
F QM +G + +E+++VSV+ ACA LG+L G+ +H Y HL ++ +LI+MY
Sbjct: 974 FDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYA 1033
Query: 296 KCGCINQASQLF--DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
KCG I A +F + E D + W+ +IGGLA+HG +++ LFH+M+ K+ P++ITF
Sbjct: 1034 KCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITF 1093
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
+ LL+AC+H G E +F S+K + E K EHY C+VD+L RAG + A + I EMP
Sbjct: 1094 LCLLAACSHGGLVKEAWHFFKSLK-ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP 1152
Query: 414 MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSR 473
+KP + G+LL+ C + NLE+A + L+ L+P + G YV L+N+YA + ++
Sbjct: 1153 IKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARS 1212
Query: 474 MRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
MR+ + K +KK G S+++++ F++ D T I+ +L+L + +D
Sbjct: 1213 MREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQLTGAWMN-----LD 1267
Query: 534 IMYED 538
+ Y+D
Sbjct: 1268 VDYDD 1272
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 10/204 (4%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
++D GD+ A L+F ++ E +V +++MI Y Y A+ ++ QM+R +
Sbjct: 924 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 983
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ ++ T+ VI +CA L + GK +H ++ L I + +L+D+Y KC +
Sbjct: 984 KA----NEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIG 1039
Query: 170 EAHKVF--EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISG 223
+A VF + + D + WN +I G A G ++++ LF KM + I +++ +++
Sbjct: 1040 DAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAA 1099
Query: 224 YTHIGSYAEALDVFRQMQMVGIEP 247
+H G EA F+ ++ G EP
Sbjct: 1100 CSHGGLVKEAWHFFKSLKESGAEP 1123
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 98/487 (20%), Positives = 197/487 (40%), Gaps = 59/487 (12%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKM------IDVCNSGGDLAYASLLFKQVKEPNVFLYNAM 83
LKK+ + + + FLV K+ +D C D+A L V A
Sbjct: 532 LKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAS------TAA 585
Query: 84 IRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS-CAGLLCPSLGKQI-HA 141
I N + L++ + + PD +IK+ C C ++ I
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHC-----PDVIAYHVLIKALCKA--CRTMEADILFN 638
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAH----KVFEEMTDRDIVAWNNLISGYARLG 197
+ GLK T N+++D + K E+ +++E+ + D++ + +LI G G
Sbjct: 639 EMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASG 698
Query: 198 QMKKARMLFDKMP----YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ +A +++M Y +++ A+I G G EAL FR+M+ +EPD +
Sbjct: 699 RPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYL 758
Query: 254 SVLPACAQLGSLELG-----EWIH-----MYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
S++ + ++ G E +H + D+N++L V + ++ A
Sbjct: 759 SLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSD-----------VDYA 807
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+ ++ + W+ VI G +N K+I ++ +M R + P+ +T+ L+ + +
Sbjct: 808 YKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRL 867
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G S+ + +E + L+ + G A + +EMP K + W S
Sbjct: 868 SNRKLGGSLHCSVVKS-GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK-NLVTWNS 925
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW----EDVSRMRKLIR 479
+L + ++ A + + + D + + + Y K G + E +M ++
Sbjct: 926 ILDAYAKSGDVVSARLVFDE---MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGS 982
Query: 480 SKSMKKT 486
SK+ + T
Sbjct: 983 SKANEVT 989
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
ARL +M+ FDK T + + Y + G AL VF ++ G + IS +
Sbjct: 200 ARLKEMRDCGFHFDKFTLTPV------LQVYCNTGKSERALSVFNEILSRGWLDEHISTI 253
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM--- 310
V+ C + E I M +++ L C LI ++K I++A QLF++M
Sbjct: 254 LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYC-VLIHGFVKESRIDKAFQLFEKMRRM 312
Query: 311 -VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
+ D+ + +IGGL H A+ L+ E++R +PP+
Sbjct: 313 GMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPD 352
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/524 (34%), Positives = 294/524 (56%), Gaps = 58/524 (11%)
Query: 15 DRFVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDV---CNSGGDLAYASLL 68
+ + IL C N E +++H ++K S FL T++I + C+S GD A +
Sbjct: 244 ENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGD---AHNV 300
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLY---------------KQMLRDP-RTGSL 112
F ++ E NV + AMI AY+ A+NL+ K L +P R
Sbjct: 301 FDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVC 360
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
P++FT V+ SC L LG+QIH+ + K + H ++LLD+Y
Sbjct: 361 TEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMY---------- 410
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
A+ G++ +AR +F+ +P +VS TA+ISGY +G E
Sbjct: 411 ---------------------AKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEE 449
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
AL++FR++Q G++ + ++ VL A + L +L+LG+ +H + ++ + V+ N+LI+
Sbjct: 450 ALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLID 509
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDI 351
MY KCG + + ++FD M ER V+SW+ ++ G + HG+ + + LF M + KV P+ +
Sbjct: 510 MYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSV 569
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDH-HIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
T + +LS C+H G ++GL F+ M +E K+EHYGC+VDLLGR+GR+++A I+
Sbjct: 570 TILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIK 629
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
+MP +P A IWGSLL +CR +SN++I A + LL +EP + GNYV+LSN+YA GRWED
Sbjct: 630 KMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWED 689
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
VS +R L+ K++ K PG S IE++ + F + D + P ++I
Sbjct: 690 VSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEI 733
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 29/246 (11%)
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
QM + G + ++L C + G+ +H + K L + LI +Y KC
Sbjct: 233 QMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 292
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLF-----------HEMQRLKVP 347
+ A +FD+M ER+VVSW+ +I + G A +A++LF + + +LK+
Sbjct: 293 SLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLS 352
Query: 348 ----------PNDITFIGLLSACAHT-GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLL 396
PN+ TF +L++C + GF ++ +K ++ E + L+D+
Sbjct: 353 NPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNY--EDHVFVGSSLLDMY 410
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED-TGNY 455
+ G++ +A + E +P + D +++S Y+ L + A+E L+ E NY
Sbjct: 411 AKDGKIHEARTVFECLPER-DVVSCTAIISG---YAQLGLDEEALELFRRLQGEGMKSNY 466
Query: 456 VLLSNI 461
V + +
Sbjct: 467 VTYTGV 472
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/507 (35%), Positives = 288/507 (56%), Gaps = 46/507 (9%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMID---VCNSGGDLAYA-SLLFKQVKEPNVF 78
+ +L +K++H + L+ + ++ L+ K + L YA ++L + + +P+ F
Sbjct: 28 AAPSLATVKQLHARALRAGVPPAHPLLAKHLLFHLASLRAPPLRYAVAVLTRVLPDPDPF 87
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
N ++R ++ LA+ L+ + L P D T P ++++CA LL G++
Sbjct: 88 SLNTVLRIAASSSRPSLALALHARRLAPP--------DTHTYPPLLQACARLLSLRHGER 139
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
IHA K GL + +N+L+ LYG C AH+V
Sbjct: 140 IHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRV------------------------ 175
Query: 199 MKKARMLFDKMPY--TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
FD++P +VSW +M++G+ G E L +FR+M V PD ++VSVL
Sbjct: 176 -------FDEIPVGERNLVSWNSMLNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVL 228
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDV 315
A A++G+L LG +H+Y K L+ + + NALI++Y KCG + A ++F++M R V
Sbjct: 229 TASAEIGALALGRRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDARRVFEEMGARRTV 288
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
VSW+++I GLA +G +A+ LF M+R K+ P +IT +G+L AC+H G ++G MYF+
Sbjct: 289 VSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMVGVLYACSHCGLVDDGFMYFNR 348
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
MK +++I +IEH GC+VDLLGRAG++ +A + I MP++P+A +W +LL +C + LE
Sbjct: 349 MKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMPLEPNAVVWRTLLGACAMHKKLE 408
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ A L+ L+P +G+YVLLSN+YA GRW DV +RK + ++K PG SL+E+
Sbjct: 409 LGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVKDGVRKNPGRSLVELR 468
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELLA 522
N V EFV GD + P + I+ +L +A
Sbjct: 469 NSVYEFVMGDRSHPESEQIYQMLAEVA 495
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 157/322 (48%), Gaps = 44/322 (13%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ-- 71
+ P+LQ+C L+ L+ +IH + K L+ F+ ++ + + G A +F +
Sbjct: 121 YPPLLQACARLLSLRHGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIP 180
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
V E N+ +N+M+ + N + ++++ML +PD FT+ V+ + A +
Sbjct: 181 VGERNLVSWNSMLNGFAANGRPNEVLTIFREML-----DVNFMPDGFTVVSVLTASAEIG 235
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLI 190
+LG+++H ++ K GL +S NAL+DLY KC + +A +VFEEM R +V+W +LI
Sbjct: 236 ALALGRRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLI 295
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
G A ++G+ EAL++F M+ + P EI
Sbjct: 296 VGLA--------------------------VNGFGK-----EALELFGIMEREKLVPTEI 324
Query: 251 SIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++V VL AC+ G ++ G + + ++ ++ R ++++ + G + +A
Sbjct: 325 TMVGVLYACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILT 384
Query: 310 M-VERDVVSWSTVIGGLANHGK 330
M +E + V W T++G A H K
Sbjct: 385 MPLEPNAVVWRTLLGACAMHKK 406
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 265/479 (55%), Gaps = 43/479 (8%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
+++T +I + + G +LF Q+ +P++ YNAMI YT NH A+ L++++L
Sbjct: 250 YVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLAS 309
Query: 107 PR---TGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
+ + +L+ LPF L + I K G+ AL +Y
Sbjct: 310 GQRVNSSTLVGLIPVYLPFN--------HLQLSRLIQNLSLKIGIILQPSVSTALTTVY- 360
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
RL +++ AR LFD+ P ++ SW AMISG
Sbjct: 361 ------------------------------CRLNEVQFARQLFDESPEKSLASWNAMISG 390
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
YT G A+ +F++M M + P+ +++ S+L ACAQLG+L +G+W+H L
Sbjct: 391 YTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+ AL++MY KCG I +A QLFD MV+++VV+W+ +I G HG +A+ LF+EM +
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+PP +TF+ +L AC+H+G +EG F SM ++ + EHY C+VD+LGRAG+L
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
AL IE MP++P +WG+LL +C + N E+A +A + L L+PE+ G YVLLSNIY+
Sbjct: 570 NALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYS 629
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+ + +R++++ + + KTPGC+LIE++++ F SGD + P IF +LE L
Sbjct: 630 TDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLT 688
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 218/506 (43%), Gaps = 80/506 (15%)
Query: 17 FVPILQSCENLIELKKIHTQIL----KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
F+ +L + L +L +I Q++ Y LS L K D+ G +A+ LF +V
Sbjct: 17 FLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDL----GAVAHVRQLFNKV 72
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+P++FL+N +IR +++N L +I LY + R + + PD FT F I + + L
Sbjct: 73 SKPDLFLFNVLIRGFSDNGLPKSSIFLYTHL----RKXTNLRPDNFTYAFAISAASRLED 128
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+G +HAH G+ S+ +A++DLY K A KVF+ M +RD V WN +ISG
Sbjct: 129 ERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE-ALDVFRQMQMVGIEPDEIS 251
++R SY E ++ VF M VG+ D +
Sbjct: 189 FSR--------------------------------NSYFEDSIRVFVDMLDVGLSFDSTT 216
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+ +VL A A+L LG I K L + LI +Y KCG + LFDQ+
Sbjct: 217 LATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQID 276
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL-------------- 357
+ D++S++ +I G + + A+ LF E+ N T +GL+
Sbjct: 277 QPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRL 336
Query: 358 ----------------SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
S T + + F D E + + ++ + G
Sbjct: 337 IQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGL 396
Query: 402 LDQALNIIEEM--PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV--L 457
D+A+++ +EM + P+ S+LS+C L I + L+ E ++ YV
Sbjct: 397 TDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKW-VHGLIKSERLESNVYVSTA 455
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSM 483
L ++YAK G + ++ L+ K++
Sbjct: 456 LVDMYAKCGSIVEARQLFDLMVDKNV 481
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
IL +C L L K +H I L + ++ T ++D+ G + A LF + + N
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +NAMI Y + A+ L+ +ML+ S I P T ++ +C+ S G
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQ-----SGIPPTGVTFLSILYACSHSGLVSEG 535
Query: 137 KQI-HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+I H+ +G + S ++D+ G+ +L A + E M
Sbjct: 536 NEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERM 578
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 288/538 (53%), Gaps = 42/538 (7%)
Query: 41 LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLY 100
+L + F ++ G + F ++ + YN I ++ N ++ L+
Sbjct: 84 MLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143
Query: 101 KQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLD 160
K+M R+ P ++T+ ++ + A LL GKQIH + + NAL D
Sbjct: 144 KRMQREG-----FEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTD 198
Query: 161 LYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK------------------- 201
+Y KC E+ +A +F+ +T +++V+WN +ISGYA+ GQ +K
Sbjct: 199 MYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVT 258
Query: 202 ----------------ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
AR +F + IV WTAM+ GY G +AL +F +M + I
Sbjct: 259 MSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHI 318
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
EPD ++ SV+ +CA+L SL G+ +H L ++ +ALI+MY KCG I+ A
Sbjct: 319 EPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARS 378
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+F+ M R+VVSW+ +I G A +G A+ LF M + K P+++TFIG+LSAC H +
Sbjct: 379 VFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNW 438
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+G YFDS+ H + ++HY C+V+LLGR GR++QA+ +I+ M PD IW +LL
Sbjct: 439 IEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
S C T ++ A +A HL L+P Y++LSN+YA GRW+DV+ +R L++SK++KK
Sbjct: 499 SICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKK 558
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL--ALHQDRAKDVIDIMYEDIGE 541
G S IE++NEV F S D T P +DI+ L +L L ++ +++ D+GE
Sbjct: 559 FAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGE 616
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 157/288 (54%), Gaps = 8/288 (2%)
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+ S N LL LY K +L +A +F++M RD +WN L+S YA+ G ++ + FD+M
Sbjct: 56 TDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRM 115
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P+ VS+ I+G++ E+L++F++MQ G EP E +IVS+L A AQL L G+
Sbjct: 116 PFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGK 175
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
IH + L I NAL +MY KCG I QA LFD + ++++VSW+ +I G A +G
Sbjct: 176 QIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNG 235
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+ K I L H+M+ P+ +T +++A G +E F K E I +
Sbjct: 236 QPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFK-----EKDIVCW 290
Query: 390 GCLVDLLGRAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNL 434
++ + GR + AL + EM ++PD+ S++SSC ++L
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASL 338
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 101/240 (42%), Gaps = 23/240 (9%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
++ SC L L + +H + + L+ + + + +ID+ + G + A +F + N
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +NAMI N A+ L++ ML+ PD T ++ +C G
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELFENMLQQK-----FKPDNVTFIGILSACLHCNWIEQG 442
Query: 137 KQIHAHVCKFGLKSHSITEN-----ALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLI 190
++ + H +T +++L G+ + +A + + M D D + W+ L+
Sbjct: 443 QEYFDSIS----NQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498
Query: 191 SGYARLGQMKK----ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
S + G + AR LF+ P T V + + + Y +G + + V M+ ++
Sbjct: 499 SICSTKGDIVNAEVAARHLFELDP-TIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVK 557
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 265/479 (55%), Gaps = 43/479 (8%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
+++T +I + + G +LF Q+ +P++ YNAMI YT NH A+ L++++L
Sbjct: 250 YVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLAS 309
Query: 107 PR---TGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
+ + +L+ LPF L + I K G+ AL +Y
Sbjct: 310 GQRVNSSTLVGLIPVYLPFN--------HLQLSRLIQNLSLKIGIILQPSVSTALTTVY- 360
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
RL +++ AR LFD+ P ++ SW AMISG
Sbjct: 361 ------------------------------CRLNEVQFARQLFDESPEKSLASWNAMISG 390
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
YT G A+ +F++M M + P+ +++ S+L ACAQLG+L +G+W+H L
Sbjct: 391 YTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449
Query: 284 TVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+ AL++MY KCG I +A QLFD MV+++VV+W+ +I G HG +A+ LF+EM +
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
+PP +TF+ +L AC+H+G +EG F SM ++ + EHY C+VD+LGRAG+L
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
AL IE MP++P +WG+LL +C + N E+A +A + L L+PE+ G YVLLSNIY+
Sbjct: 570 NALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYS 629
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+ + +R++++ + + KTPGC+LIE++++ F SGD + P IF +LE L
Sbjct: 630 TDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLT 688
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 218/506 (43%), Gaps = 80/506 (15%)
Query: 17 FVPILQSCENLIELKKIHTQIL----KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
F+ +L + L +L +I Q++ Y LS L K D+ G +A+ LF +V
Sbjct: 17 FLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDL----GAVAHVRQLFNKV 72
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+P++FL+N +IR +++N L +I LY + R + + PD FT F I + + L
Sbjct: 73 SKPDLFLFNVLIRGFSDNGLPKSSIFLYTHL----RKKTNLRPDNFTYAFAISAASRLED 128
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+G +HAH G+ S+ +A++DLY K A KVF+ M +RD V WN +ISG
Sbjct: 129 ERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE-ALDVFRQMQMVGIEPDEIS 251
++R SY E ++ VF M VG+ D +
Sbjct: 189 FSR--------------------------------NSYFEDSIRVFVDMLDVGLSFDSTT 216
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+ +VL A A+L LG I K L + LI +Y KCG + LFDQ+
Sbjct: 217 LATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQID 276
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL-------------- 357
+ D++S++ +I G + + A+ LF E+ N T +GL+
Sbjct: 277 QPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRL 336
Query: 358 ----------------SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
S T + + F D E + + ++ + G
Sbjct: 337 IQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGL 396
Query: 402 LDQALNIIEEM--PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYV--L 457
D+A+++ +EM + P+ S+LS+C L I + L+ E ++ YV
Sbjct: 397 TDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKW-VHGLIKSERLESNVYVSTA 455
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSM 483
L ++YAK G + ++ L+ K++
Sbjct: 456 LVDMYAKCGSIVEARQLFDLMVDKNV 481
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
IL +C L L K +H I L + ++ T ++D+ G + A LF + + N
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V +NAMI Y + A+ L+ +ML+ S I P T ++ +C+ S G
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQ-----SGIPPTGVTFLSILYACSHSGLVSEG 535
Query: 137 KQI-HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
+I H+ +G + S ++D+ G+ +L A + E M
Sbjct: 536 NEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERM 578
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/418 (39%), Positives = 259/418 (61%), Gaps = 10/418 (2%)
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS---ITENALLDLYGKCDEL 168
L+ P FTL F S + + + HA + K G + S +AL+ Y + L
Sbjct: 80 LLTPLSFTLLFSSPSSS----TTTTRLAHALLSKSGHAASSGDPYLASALVASYARSGHL 135
Query: 169 IEAHKVFEEMTDR-DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
E+ +VF+E+ D A N L+S YAR G++ A LF MP ++SWTAM+SGY
Sbjct: 136 AESRRVFDELPPHSDAAARNALLSAYARCGRVDDAESLFAGMPDRNVISWTAMVSGYAQN 195
Query: 228 GSYAEALDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
G + EA+ F +M + G+ P+E+++ SVLPACA +G+L LG + Y +L +
Sbjct: 196 GRHEEAVRTFLEMWEGCGVRPNEVTVSSVLPACAAVGALALGRKVERYARGRGMLTNVYV 255
Query: 287 CNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
NAL+EMY KCG I +A +F + +RD+ SW+++I A HG + + LFH+++
Sbjct: 256 ANALVEMYAKCGSIRRAWMVFRGIGKQRDLCSWNSMIMAFAVHGLWREVLGLFHKLRMTG 315
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
P+ ITF+G++ AC H G +EG + F+SM+ + ++ +IEHYGC+VDLLGRAG L +A
Sbjct: 316 AKPDGITFVGVILACTHGGLVDEGKLLFNSMREEFGLKPRIEHYGCMVDLLGRAGLLKEA 375
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
++I MPM+PDA IWG+LL +C + NLE+A +A+E L+ LEP++T N V+LSNIYA H
Sbjct: 376 DSLIASMPMEPDAVIWGALLGACSFHGNLELAEVAVEKLMRLEPQNTANLVILSNIYASH 435
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
G+W+ V+++ KL++ K KK+ G S IE++ + +F+ D + P + ++ L+ + L
Sbjct: 436 GKWDGVAQVWKLLKEKDHKKSAGYSFIELDGRMHKFLVEDKSHPIYEMVYDTLDSITL 493
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 286/523 (54%), Gaps = 45/523 (8%)
Query: 8 LSIKELE----DRFV--PILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNS 58
LS+ LE D FV ++ +C NL L K+IH +I+ + + L + ++++
Sbjct: 161 LSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGK 220
Query: 59 GGDLAYASLLFKQVKEPNVF-------------------------------LYNAMIRAY 87
GD+ A+ + +KEP+ F L+N+MI Y
Sbjct: 221 CGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGY 280
Query: 88 TNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG 147
N+ A+ L+ M R + D T V+ +C+ L G Q+HAHV K G
Sbjct: 281 VANNEALEALELFNNMRRKG-----VQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVG 335
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
+ I ++AL+D+Y KC +A K+F ++ D + N++I+ Y+ G++ AR +FD
Sbjct: 336 FTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFD 395
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
MP +++SW +MI G++ EALD+F +M +G+ D+ S+ V+ ACA + SLEL
Sbjct: 396 TMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLEL 455
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
GE I L +I +L++ Y KCG + +LFD+M++ D V W++++ G A
Sbjct: 456 GEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYAT 515
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
+G +A+++F +M+ + V P DITF+G+LSAC H G EG +F +MK D+HI IE
Sbjct: 516 NGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIE 575
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
HY C+VDL RAG L+ A+N+IE+MP+K D +W S+L C + N + + ++ L
Sbjct: 576 HYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDL 635
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+PE++G YV LS IYA W +++RKL+ K + K PGCS
Sbjct: 636 DPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKVPGCS 678
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 187/402 (46%), Gaps = 45/402 (11%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G+L A LF ++ N +N+MI Y N A+ L+K + +P D F
Sbjct: 118 GNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPL--ERFCGDTFV 175
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L V+ +C L GKQIHA + ++ S+ ++L++LYGKC ++ A+ V M
Sbjct: 176 LATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMK 235
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+ D + + LISGYA G+M AR +F +V W +MISGY EAL++F
Sbjct: 236 EPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNN 295
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK--- 296
M+ G++ D + SVL AC+ LG ++ G +H + K +I +AL++MY K
Sbjct: 296 MRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRR 355
Query: 297 ----------------------------CGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
CG I+ A Q+FD M + ++SW+++I G + +
Sbjct: 356 PDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQN 415
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD-----SMKRDHHIE 383
+A+ LF EM +L + + + G++SACA G F ++ D I
Sbjct: 416 ACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIIS 475
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
LVD + G ++ + + M MK D W S+L
Sbjct: 476 TS------LVDFYCKCGLVEHGRKLFDRM-MKSDEVPWNSML 510
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 171/397 (43%), Gaps = 98/397 (24%)
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE--NALLDLYGKCDELIEAHK 173
D +L + SC G+ +H K G+ HS+ N LL +Y +C+ + EA +
Sbjct: 5 DLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVL-HSVLSIGNRLLQMYSRCNSMREAQQ 63
Query: 174 VFEEMTDRDIVAWNNLI-------------------------------SGYARLGQMKKA 202
+FEEM R+ +WN +I SG+A+ G ++ A
Sbjct: 64 LFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVA 123
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE---PDEISIVSVLPAC 259
R LF++MP+ ++W +MI GY G EA+ +F+ + + +E D + +V+ AC
Sbjct: 124 RRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGAC 183
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD----- 314
LG+L+ G+ IH + + +V+ ++L+ +Y KCG I+ A+ + + M E D
Sbjct: 184 TNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLS 243
Query: 315 --------------------------VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
VV W+++I G + +A +A+ LF+ M+R V
Sbjct: 244 ALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQE 303
Query: 349 NDITFIGLLSACAHTGFWNEGL--------------MYFDSMKRDHHIEHKIEHYGC--- 391
+ TF +LSAC+ G ++G+ + DS D + + + C
Sbjct: 304 DYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLF 363
Query: 392 -------------LVDLLGRAGRLDQALNIIEEMPMK 415
++ + GR+D A I + MP K
Sbjct: 364 SDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSK 400
>gi|125528817|gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indica Group]
Length = 565
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 232/356 (65%)
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
++ NA++ +Y ++ A +VF++M RD +W+ LI GY + G M+ AR +FD+MP
Sbjct: 180 VSWNAMVVVYVNAGDVSSARRVFDQMPTRDSTSWSVLIVGYCKCGSMRSAREVFDRMPAK 239
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
+V+WTAMI+GY G E+L +FR+M+ GIEPD ++V V+ A +Q+GS EL W+
Sbjct: 240 NLVAWTAMINGYAQSGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGSTELAGWVG 299
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
Y DK + R + AL++M+ KCG +++A F ++ + D ++ +I GLA HG A
Sbjct: 300 SYVDKKRIERNDKVLTALVDMHAKCGNVDEALSAFREIAQPDAYPYTALISGLAAHGHAK 359
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
A+ +F MQ V P+ ITF+G+L+AC+H G ++GL Y+++M + + +E + +HY C+
Sbjct: 360 LALQVFERMQAQSVWPDPITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACV 419
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VD+LGRAGRL++A +++ MPM P G+LLS+C+T+ N+EIA I L LEP +T
Sbjct: 420 VDMLGRAGRLEEAFEMVQTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPHNT 479
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
GNY++LSNIYA+ +WE+ R+R ++R++ K PG S+ + E VS ++ K
Sbjct: 480 GNYIMLSNIYAEKEQWEEAERIRSVMRTRVPFKQPGSSMGGGSTEGAWQVSFEELK 535
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 156/333 (46%), Gaps = 42/333 (12%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEA 171
+ PD F+LPF + + A L LG +HA + L + NAL+DLY KCD+L A
Sbjct: 77 VSPDHFSLPFALNAAASLRLLPLGASLHALALRLALLPGRLPVANALVDLYAKCDDLPAA 136
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
H ++ D V++N+L+ +ARL + A LF MP T VSW AM+ Y + G +
Sbjct: 137 HTALADIAAPDAVSFNSLLCAHARLASVPDAESLFAAMPSRTQVSWNAMVVVYVNAGDVS 196
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
A VF QM R + + LI
Sbjct: 197 SARRVFDQMPT---------------------------------------RDSTSWSVLI 217
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
Y KCG + A ++FD+M +++V+W+ +I G A G +++ LF EM+ + P+
Sbjct: 218 VGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGYAQSGVPKESLALFREMEAAGIEPDAA 277
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +G++SA + G E + S IE + LVD+ + G +D+AL+ E
Sbjct: 278 TMVGVISAASQIGS-TELAGWVGSYVDKKRIERNDKVLTALVDMHAKCGNVDEALSAFRE 336
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ +PDA + +L+S + + ++A+ E +
Sbjct: 337 I-AQPDAYPYTALISGLAAHGHAKLALQVFERM 368
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+ + + K + +++ ++T ++D+ G++ A F+++ +P+ + Y A+I +
Sbjct: 298 VGSYVDKKRIERNDKVLTALVDMHAKCGNVDEALSAFREIAQPDAYPYTALISGLAAHGH 357
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLLCPSLGKQIHAHVCKFGLKS 150
LA+ ++++M + PD T V+ +C AGL+ L A V +G++
Sbjct: 358 AKLALQVFERM-----QAQSVWPDPITFVGVLTACSHAGLVDKGL-DYWEAMVKYYGMER 411
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEM 178
+ ++D+ G+ L EA ++ + M
Sbjct: 412 RADHYACVVDMLGRAGRLEEAFEMVQTM 439
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/448 (38%), Positives = 259/448 (57%), Gaps = 42/448 (9%)
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F N ++R + +A+ L+++ L LPD T P +I++CA LL G+
Sbjct: 773 FPLNTVLRIAAGSPRPRVALELHRR--------RLALPDTHTYPPLIQACARLLALREGE 824
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+HA K G + +N+L+ LYG C AHKV
Sbjct: 825 CLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKV----------------------- 861
Query: 198 QMKKARMLFDKMPYT--TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
FD+MP +VSW +M++ + G E L VF +M V PD +IVSV
Sbjct: 862 --------FDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSV 913
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERD 314
L ACA+ G+L LG +H+Y +K L+ + + NALI++Y KCG +N A ++F++M + R
Sbjct: 914 LTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRT 973
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VVSW+++I GLA +G +A+ LF M+R K+ P +IT +G+L AC+H G ++G YFD
Sbjct: 974 VVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFD 1033
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
MK D+ I +IEH GC+VDLLGRAGR+++A + I MP++P+A +W +LL SC + L
Sbjct: 1034 RMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKL 1093
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E+ +A E L+ L+P +G+YVLLSN+YA G W DV +RK + ++K PG SL+E+
Sbjct: 1094 ELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVEL 1153
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLELLA 522
N V EFV GD + P + I+ +L +A
Sbjct: 1154 RNSVYEFVMGDRSHPESEQIYEMLAEIA 1181
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 169/372 (45%), Gaps = 45/372 (12%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ-- 71
+ P++Q+C L+ L++ +H + K F+ ++ + + G A +F +
Sbjct: 807 YPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMP 866
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
V+ N+ +N+M+ ++ N + ++ +ML G PD FT+ V+ +CA
Sbjct: 867 VRGRNLVSWNSMLNSFAANGRPNEVLTVFWEML-----GVDFAPDGFTIVSVLTACAEFG 921
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLI 190
+LG+++H +V K GL +S NAL+DLY KC + +A ++FEEM R +V+W +LI
Sbjct: 922 ALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLI 981
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
G A G F K EAL++F M+ + P EI
Sbjct: 982 VGLAANG--------FGK-----------------------EALELFSLMEREKLVPTEI 1010
Query: 251 SIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++V VL AC+ G ++ G + + + R ++++ + G + +A
Sbjct: 1011 TMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIIT 1070
Query: 310 M-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M +E + V W T++G A H K + + L P + ++ L + A G W +
Sbjct: 1071 MPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELD-PGHSGDYVLLSNLYAAVGMWAD 1129
Query: 369 GLMYFDSMKRDH 380
+ +M +D
Sbjct: 1130 VHVLRKTMVKDR 1141
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/514 (35%), Positives = 283/514 (55%), Gaps = 51/514 (9%)
Query: 17 FVPILQSCENLIEL---KKIHTQILK---YLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
++ +L +C +L L K+IH QI++ + + + +TKM C + D A +F+
Sbjct: 249 YMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKD---AREVFE 305
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA-- 128
+ +V +N MI ++ A ++ +ML++ + PD+ T ++ +CA
Sbjct: 306 CLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKE-----CVAPDRVTYLAILSACARP 360
Query: 129 -GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
GL C GK+IHA K GL S D+ N
Sbjct: 361 GGLAC---GKEIHARAVKDGLVS-------------------------------DVRFGN 386
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
LI+ Y++ G MK AR +FD+MP +VSWTA++ GY G E+ F++M G+E
Sbjct: 387 ALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEA 446
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
++I+ + VL AC+ +L+ G+ IH K + + NAL+ MY KCG + A ++
Sbjct: 447 NKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVS 506
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
+ M RDVV+W+T+IGGLA +G+ +A+ F M+ ++ PN TF+ ++SAC
Sbjct: 507 EGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVE 566
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EG F SM++D+ I +HY C+VD+L RAG L +A ++I MP KP A +WG+LL++
Sbjct: 567 EGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAA 626
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR + N+EI A E L LEP++ G YV LS IYA G W DV+++RKL++ + +KK P
Sbjct: 627 CRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEP 686
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
G S IEV EV FV+GD + P ++I+ LE L
Sbjct: 687 GRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEAL 720
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 203/412 (49%), Gaps = 41/412 (9%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+V +LQSC ++L K++H IL++ + + +++ ++ + G + A LF +
Sbjct: 47 YVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFS 106
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +N MI Y + L A NL+ M ++ + PDKFT ++ +C+
Sbjct: 107 NKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEG-----LEPDKFTFVSILSACSSPAAL 161
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ G+++H V + GL +++ NAL+ +Y KC + +A +VF+ M RD V+W L Y
Sbjct: 162 NWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY 221
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A SGY E+L + M G+ P I+ +
Sbjct: 222 AE--------------------------SGYAQ-----ESLKTYHAMLQEGVRPSRITYM 250
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+VL AC L +LE G+ IH ++ + AL +MYIKCG + A ++F+ + R
Sbjct: 251 NVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNR 310
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV++W+T+IGGL + G+ +A +FH M + V P+ +T++ +LSACA G G
Sbjct: 311 DVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIH 370
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+D + + L+++ +AG + A + + MP K D W +L+
Sbjct: 371 ARAVKDGLVS-DVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALV 420
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 157/323 (48%), Gaps = 35/323 (10%)
Query: 116 DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVF 175
D + +++SC ++GKQ+H H+ +FG+K + N LL LY C
Sbjct: 43 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHC---------- 92
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
G + +AR LFDK ++VSW MISGY H G EA +
Sbjct: 93 ---------------------GSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFN 131
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
+F MQ G+EPD+ + VS+L AC+ +L G +H+ + L + NALI MY
Sbjct: 132 LFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYA 191
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
KCG + A ++FD M RD VSW+T+ G A G A +++ +H M + V P+ IT++
Sbjct: 192 KCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMN 251
Query: 356 LLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM 414
+LSAC +G ++ ++ +HH + ++ L + + G + A + E +P
Sbjct: 252 VLSACGSLAALEKGKQIHAQIVESEHHSDVRVST--ALTKMYIKCGAVKDAREVFECLPN 309
Query: 415 KPDAKIWGSLLSSCRTYSNLEIA 437
+ D W +++ LE A
Sbjct: 310 R-DVIAWNTMIGGLVDSGQLEEA 331
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 203/455 (44%), Gaps = 72/455 (15%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV IL +C + L +++H ++++ L+ + + +I + G + A +F +
Sbjct: 148 FVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMA 207
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ + + AY + ++ Y ML++ + P + T V+ +C L
Sbjct: 208 SRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEG-----VRPSRITYMNVLSACGSLAAL 262
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GKQIHA + + S AL +Y KC
Sbjct: 263 EKGKQIHAQIVESEHHSDVRVSTALTKMYIKC---------------------------- 294
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G +K AR +F+ +P +++W MI G G EA +F +M + PD ++ +
Sbjct: 295 ---GAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYL 351
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
++L ACA+ G L G+ IH K+ L+ NALI MY K G + A Q+FD+M +R
Sbjct: 352 AILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR 411
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-----------H 362
DVVSW+ ++GG A+ G+ ++ F +M + V N IT++ +L AC+ H
Sbjct: 412 DVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIH 471
Query: 363 TGFWNEGL------------MYF------DSMKRDHHIEHK-IEHYGCLVDLLGRAGRLD 403
G+ MYF D+++ + + + + L+ L + GR
Sbjct: 472 AEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGL 531
Query: 404 QALNIIEEMP---MKPDAKIWGSLLSSCRTYSNLE 435
+AL E M M+P+A + +++S+CR + +E
Sbjct: 532 EALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVE 566
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
G YA A DV + + G + D V +L +C + L +G+ +H + + + I
Sbjct: 24 GWYAPA-DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYII 82
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
N L+++Y+ CG +N+A +LFD+ + VVSW+ +I G A+ G +A +LF MQ+ +
Sbjct: 83 NTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLE 142
Query: 348 PNDITFIGLLSACAHTGFWNEG 369
P+ TF+ +LSAC+ N G
Sbjct: 143 PDKFTFVSILSACSSPAALNWG 164
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 266/475 (56%), Gaps = 36/475 (7%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
+++T + + + G++ A LLF Q+ +P++ YNAMI YT N+ ++ L+K++L
Sbjct: 243 YVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELL-- 300
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
+ +K ++ L P H H+ + ++G C
Sbjct: 301 ------VSGEKVNSSSIVG-----LIPVFFPFGHLHLTRC--------------IHGFCT 335
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ L + Y+RL +++ AR+LFD+ ++ SW AMISGY
Sbjct: 336 KSGVVSNSSVSTA---------LTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQ 386
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
G +A+ +F++MQ + P+ +++ S+L ACAQLG+L LG+W+H ++ +
Sbjct: 387 NGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFV 446
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
ALI+MY KCG I +A +LF M E++ V+W+ +I G HG H+A++LF+EM +V
Sbjct: 447 STALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRV 506
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
P +TF+ +L AC+H G EG F SM DH E EHY C+VDLLGRAG LD+AL
Sbjct: 507 SPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKAL 566
Query: 407 NIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHG 466
+ I +MP++P +WG+LL +C + + +A +A + L L+P++ G YVLLSNIY+
Sbjct: 567 DFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQ 626
Query: 467 RWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+ + + +R +++ + + KTPGC+LIEV N + F SGD + P I+ +LE L
Sbjct: 627 NYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKL 681
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 208/491 (42%), Gaps = 87/491 (17%)
Query: 10 IKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLF 69
I + F+ ++ L +L + H QI+ L VTK+ + + ASLLF
Sbjct: 6 IASTRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLF 65
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ P++FLYN +IRA++ N+ A++LY + R + + PD FT FVI +
Sbjct: 66 STIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHL----RKSTPLEPDNFTYAFVISGAS- 120
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L L H+ V FG S +A++ Y K + A KVF+ M +RD V WN +
Sbjct: 121 SLGLGLLLHAHSIVAGFG--SDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTM 178
Query: 190 ISGYAR----------LGQMKKARMLFDKMPYTTIVSWTA-------------------- 219
+SG + G M K + FD ++ A
Sbjct: 179 VSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGF 238
Query: 220 -----MISG----YTHIGSYAEALDVFRQMQMVGIEPDEIS------------------- 251
+I+G Y+ G A +F Q+ +PD +S
Sbjct: 239 HSHAYVITGLACLYSKCGEIETARLLFGQIG----QPDLVSYNAMISGYTCNNETESSVR 294
Query: 252 ----------------IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
IV ++P G L L IH +C K+ ++ + + AL +Y
Sbjct: 295 LFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYS 354
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
+ I A LFD+ E+ + SW+ +I G A +G KAI LF EMQ+ +V PN +T
Sbjct: 355 RLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTS 414
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+LSACA G + G D + R+ E I L+D+ + G + +A + MP K
Sbjct: 415 ILSACAQLGALSLGKWVHDLINRE-SFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK 473
Query: 416 PDAKIWGSLLS 426
+A W +++S
Sbjct: 474 -NAVTWNAMIS 483
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 44/346 (12%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+P+ +L + IH K + ++ + T + V + ++ A LLF + E +
Sbjct: 314 LIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKS 373
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +NAMI Y N L AI+L+++M + + P+ T+ ++ +CA L SLG
Sbjct: 374 LASWNAMISGYAQNGLTEKAISLFQEMQK-----CEVRPNPVTVTSILSACAQLGALSLG 428
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K +H + + +S+ AL+D+Y KC + EA ++F M +++ V WN +ISGY
Sbjct: 429 KWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYG-- 486
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+ GY H EAL++F +M + P ++ +SVL
Sbjct: 487 ------------------------LHGYGH-----EALNLFNEMLHSRVSPTGVTFLSVL 517
Query: 257 PACAQLGSLELGEWIHMYCDKNH---LLRRTVICNALIEMYIKCGCINQASQLFDQM-VE 312
AC+ G + G+ I +H L C ++++ + G +++A +M VE
Sbjct: 518 YACSHAGLVREGDEIFRSMVHDHGFEPLPEHYAC--MVDLLGRAGNLDKALDFIRKMPVE 575
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
W ++G H A+ A + ++ P ++ + LLS
Sbjct: 576 PGPPVWGALLGACMIHKDANLA--RLASDKLFELDPQNVGYYVLLS 619
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 277/483 (57%), Gaps = 5/483 (1%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
++H+QI+K +S+ L ++DV G + A LF ++ + + +++ A+
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
+ +++ M T + PD F ++++C+ L LGKQ+HA
Sbjct: 84 IPRRTLSMLNTMF----THDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDD 139
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
+ +++L+D+Y KC + EA VF+ + ++ V+W ++ISGYAR G+ +A LF + P
Sbjct: 140 EVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPV 199
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLELGEW 270
+ SWTA+ISG G + +F +M+ GI+ D + + SV+ CA L LELG+
Sbjct: 200 RNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQ 259
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
IH I NAL++MY KC I A +F +M +DV+SW+++I G A HGK
Sbjct: 260 IHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGK 319
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
A +A+ L+ EM ++ PN++TF+GLL AC+H G + G F SM D+ I ++HY
Sbjct: 320 AEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYT 379
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
CL+DLL R+G LD+A N+++++P KPD W SLLS+C ++NLE+ V + +L L+PE
Sbjct: 380 CLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPE 439
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
D Y+LLSN+YA W VS++RKL+ S ++K PG S I+ + Q F +G+
Sbjct: 440 DPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHP 499
Query: 511 LKD 513
+K+
Sbjct: 500 MKN 502
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 159/382 (41%), Gaps = 64/382 (16%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F I+++C +L L K++H + + + + +ID+ G A +F +
Sbjct: 108 FACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSIL 167
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQ---------------------------MLRD 106
N + +MI Y + A++L+ Q + +
Sbjct: 168 FKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNE 227
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
R + + D L V+ CA L LGKQIH V G +S NAL+D+Y KC
Sbjct: 228 MRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 287
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+++ A +F M +D+++W ++I G A+ G+ ++A L+D+M + I
Sbjct: 288 DILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRI------------ 335
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
+P+E++ V +L AC+ G + G + ++ + ++
Sbjct: 336 -------------------KPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQ 376
Query: 287 -CNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
L+++ + G +++A L D++ + D +W++++ H + + + L
Sbjct: 377 HYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDL 436
Query: 345 KVPPNDITFIGLLSACAHTGFW 366
K P + T+I L + A W
Sbjct: 437 K-PEDPSTYILLSNVYAGAEMW 457
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 278/488 (56%), Gaps = 38/488 (7%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
E +++HT ++K S +L T++I + N L A +F ++ + NV + AMI AY+
Sbjct: 108 EGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYS 167
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
A+NL+ +MLR S P+ FT ++ SC G L G+QIH+ K
Sbjct: 168 QRGFAFEALNLFVEMLR-----SDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNY 222
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+SH ++LLD+Y K + +AH V F
Sbjct: 223 ESHMFVGSSLLDMYAKSGRICDAHGV-------------------------------FHC 251
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+P +V+ TA+ISGY +G EAL +FRQ+Q+ G+ + ++ SVL A + L +L G
Sbjct: 252 LPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHG 311
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+ +H + ++ V+ N+LI+MY KCG + A ++FD M ER +SW+ ++ G + H
Sbjct: 312 KQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKH 371
Query: 329 GKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGL-MYFDSMKRDHHIEHKI 386
G A + + LF M + KV P+ IT++ +LS C+H + GL ++++ + IE I
Sbjct: 372 GMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDI 431
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
HYGC+VDLLGRAGR+++A + I++MP P A IWGSLL SCR +S++EI +I + LL
Sbjct: 432 GHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE 491
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
LEPE+ GNYV+LSN+YA G+WED+ +R L++ K++ K PG S +E++ V F + D
Sbjct: 492 LEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDH 551
Query: 507 TKPFLKDI 514
T P +++
Sbjct: 552 THPRREEV 559
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 6/189 (3%)
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
G EAL QM ++G E ++L C ++ G+ +H + K L +
Sbjct: 72 GQLKEAL---LQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLR 128
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
LI +Y KC C+ A ++FD+M +++VVSW+ +I + G A +A++LF EM R
Sbjct: 129 TRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE 188
Query: 348 PNDITFIGLLSAC-AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
PN TF +L++C GF ++ ++KR++ E + L+D+ ++GR+ A
Sbjct: 189 PNHFTFATILTSCYGSLGFETGRQIHSIAIKRNY--ESHMFVGSSLLDMYAKSGRICDAH 246
Query: 407 NIIEEMPMK 415
+ +P +
Sbjct: 247 GVFHCLPER 255
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/482 (36%), Positives = 268/482 (55%), Gaps = 37/482 (7%)
Query: 42 LSQSNFLVTKMI-DVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLY 100
L QSN V I D+ G L A L+F+++ + +NA+I A+ N ++L+
Sbjct: 406 LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF 465
Query: 101 KQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLD 160
ML+ S + PD+FT V+K+CAG + G +IH + K L S AL+D
Sbjct: 466 VWMLQ-----SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALID 520
Query: 161 LYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
+Y KC G M+KA L D++ T+VSW A+
Sbjct: 521 MYSKC-------------------------------GMMEKAEKLHDRLAEQTVVSWNAI 549
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
ISG++ EA F +M +G++PD + ++L CA L ++ELG+ IH K L
Sbjct: 550 ISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKEL 609
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
I + L++MY KCG + +F++ RD V+W+ ++ G A HG +A+ +F
Sbjct: 610 QSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEY 669
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
MQ V PN TF+ +L AC H G +GL YF SM ++ ++ ++EHY C+VD++GR+G
Sbjct: 670 MQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSG 729
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSN 460
++ +AL +IE MP + DA IW +LLS C+ + N+E+A A +L LEPED+ YVLLSN
Sbjct: 730 QVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSN 789
Query: 461 IYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLEL 520
IYA G W +V+++RK++R +KK PGCS IE+ +EV F+ GD P K+I+ L++
Sbjct: 790 IYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDV 849
Query: 521 LA 522
L
Sbjct: 850 LT 851
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 141/285 (49%), Gaps = 12/285 (4%)
Query: 87 YTNNHLYGLAI-------NLYKQMLRDPRTGSLILP-DKFTLPFVIKSCAG--LLCPSLG 136
+T+ HL+ + + +K + P + P K T + + C+ LCP G
Sbjct: 4 HTSRHLFPIRFFFNFQSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCP--G 61
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
KQ HA + K N L+ +Y KC +L A KVF+ M RD V+WN ++ GYA
Sbjct: 62 KQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGR 121
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A+ LFD MP +VSW ++ISGY H G + + +DVF QM +G D + VL
Sbjct: 122 GDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVL 181
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
+C+ L G IH K V +AL++MY KC ++ + Q F M E++ V
Sbjct: 182 KSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWV 241
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
SWS +I G + + LF EMQ+ V + TF + +CA
Sbjct: 242 SWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCA 286
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 207/464 (44%), Gaps = 55/464 (11%)
Query: 14 EDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+ F + +SC L L+ ++H LK + T +D+ +L+ A LF
Sbjct: 275 QSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFN 334
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
+ N+ YNA+I Y + A+ +++ + + S + D+ +L ++CA +
Sbjct: 335 SLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQK-----SGLGLDEVSLSGAFRACAVI 389
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G Q+H K +S+ NA+LD+YGKC L+E
Sbjct: 390 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVE-------------------- 429
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
A ++F++M VSW A+I+ + G+ + L +F M G+EPDE
Sbjct: 430 -----------ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEF 478
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ SVL ACA +L G IH K+ L + + ALI+MY KCG + +A +L D++
Sbjct: 479 TYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRL 538
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG- 369
E+ VVSW+ +I G + ++ +A F +M + V P++ T+ +L CA+ G
Sbjct: 539 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 598
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
++ +K++ + I LVD+ + G + I E+ P + D W +++
Sbjct: 599 QIHAQIIKKELQSDAYIS--STLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYA 655
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSR 473
+ + E L + E Y+ L N+ H + V R
Sbjct: 656 QHG------LGEEALKIFE------YMQLENVKPNHATFLAVLR 687
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 175/377 (46%), Gaps = 40/377 (10%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+ A LF + E +V +N++I Y +N + I+++ QM R G++ D+ T
Sbjct: 122 GDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQM---GRMGTVF--DRTT 176
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
V+KSC+ L G QIH K G +T +ALLD+Y
Sbjct: 177 FAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMY----------------- 219
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
A+ ++ + F MP VSW+A+I+G L++F++
Sbjct: 220 --------------AKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKE 265
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
MQ G+ + + SV +CA L +L LG +H + K VI A ++MY+KC
Sbjct: 266 MQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNN 325
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++ A +LF+ + ++ S++ +I G A K +A+ +F +Q+ + ++++ G A
Sbjct: 326 LSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRA 385
Query: 360 CAHTGFWNEGLMYFD-SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
CA EGL SMK + I ++D+ G+ G L +A + EEM + DA
Sbjct: 386 CAVIKGDLEGLQVHGLSMKS--LCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDA 442
Query: 419 KIWGSLLSSCRTYSNLE 435
W +++++ N E
Sbjct: 443 VSWNAIIAAHEQNGNEE 459
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 271/500 (54%), Gaps = 49/500 (9%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD-----LAYASLLFKQVKEP 75
L C +L L ++H +K L+ LVT+++ +C +G D LAYA +F +V P
Sbjct: 32 LPHCTSLRTLAQLHAAAVKAGLAAHPALVTRLLTLC-TGPDAGPAHLAYARQVFDRVPHP 90
Query: 76 -NVFLYNAMIRAYT-----NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ YN ++R Y ++ A+ ++ +ML + + PD +T ++K+CA
Sbjct: 91 ADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEG-----VAPDTYTFVSLLKACAA 145
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
G+Q HA K G H L+++Y +C
Sbjct: 146 ARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAEC------------------------ 181
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
G + AR++F +VS+ AMI+ EAL +FR+MQ G++P
Sbjct: 182 -------GDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTS 234
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++++SVL ACA LG+LELG W+H Y K L + ALI+MY KCG + A +F
Sbjct: 235 VTVISVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQG 294
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M +D +WS +I ANHG +AI LF EM++ + P+DITF+G+L AC+H+G +EG
Sbjct: 295 MESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEG 354
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
L YFD MK DH I I+HYGC+ DLL R+G+L++A I+E+P+ P +W +LLS+C
Sbjct: 355 LQYFDDMK-DHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACG 413
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ + E+ E +L L+ G+YV+ SN+ A G WE+++ +RKL+ K + K PGC
Sbjct: 414 GHGDFELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGC 473
Query: 490 SLIEVNNEVQEFVSGDDTKP 509
S IE++N V EF +GD P
Sbjct: 474 SSIEIDNTVHEFFAGDGRHP 493
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 161/358 (44%), Gaps = 45/358 (12%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L++C E ++ H +K + +++ +I++ GD A ++F
Sbjct: 136 FVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTD 195
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
V YNAMI A + G A+ L+++M G + P T+ V+ +CA L
Sbjct: 196 GGCVVSYNAMIAAAVRSSRPGEALVLFREM-----QGKGLKPTSVTVISVLSACALLGAL 250
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+ +H +V K GL S AL+D+Y KC L +A VF+ M +D AW+ +I Y
Sbjct: 251 ELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAY 310
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G + EA+ +F +M+ G++PD+I+ +
Sbjct: 311 ANHGYGR-------------------------------EAISLFEEMKKEGMKPDDITFL 339
Query: 254 SVLPACAQLGSLELGEWIHMYCD-KNHLLRRTVI-CNALIEMYIKCGCINQASQLFDQM- 310
VL AC+ G + E + + D K+H + + + ++ + G + +A + D++
Sbjct: 340 GVLYACSHSGLVS--EGLQYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELP 397
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ + W T++ HG +F + +L + ++ + CA+TG+W E
Sbjct: 398 INPTPILWRTLLSACGGHGDFELGKRVFERILKLD-DSHGGDYVIFSNLCANTGYWEE 454
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/482 (36%), Positives = 268/482 (55%), Gaps = 37/482 (7%)
Query: 42 LSQSNFLVTKMI-DVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLY 100
L QSN V I D+ G L A L+F+++ + +NA+I A+ N ++L+
Sbjct: 343 LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF 402
Query: 101 KQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLD 160
ML+ S + PD+FT V+K+CAG + G +IH + K + S AL+D
Sbjct: 403 VWMLQ-----SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALID 457
Query: 161 LYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
+Y KC G M+KA L D++ T+VSW A+
Sbjct: 458 MYSKC-------------------------------GMMEKAEKLHDRLAEQTVVSWNAI 486
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
ISG++ EA F +M +G++PD + ++L CA L ++ELG+ IH K L
Sbjct: 487 ISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKEL 546
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
I + L++MY KCG + +F++ RD V+W+ ++ G A HG +A+ +F
Sbjct: 547 QSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEY 606
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
MQ V PN TF+ +L AC H G +GL YF SM ++ ++ ++EHY C+VD++GR+G
Sbjct: 607 MQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSG 666
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSN 460
++ +AL +IE MP + DA IW +LLS C+ + N+E+A A +L LEPED+ YVLLSN
Sbjct: 667 QVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSN 726
Query: 461 IYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLEL 520
IYA G W +V+++RK++R +KK PGCS IE+ +EV F+ GD P K+I+ L++
Sbjct: 727 IYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDV 786
Query: 521 LA 522
L
Sbjct: 787 LT 788
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 178/382 (46%), Gaps = 38/382 (9%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F I Q C + L K+ H +++ + F+ +I + DL +A +F +
Sbjct: 45 FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMP 104
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQM---------LRDPRTGSL-ILPDKFTLPFV 123
+ + +NAM+ Y G+A L+ M L D R G + + D+ T V
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVV 164
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC----DELIEAHKVFEEMT 179
+KSC+ L G QIH K G +T +ALLD+Y KC D+L ++F+EM
Sbjct: 165 LKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQ 224
Query: 180 DRDIVAW------------NNLISGYARLGQMKK-------ARMLFDKMPYTTIVSWTAM 220
+ A +++ G A L K + LF+ +P + S+ A+
Sbjct: 225 KAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAI 284
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL-GSLELGEWIHMYCDKNH 279
I GY EAL +FR +Q G+ DE+S+ ACA + G LE G +H K+
Sbjct: 285 IVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLE-GLQVHGLSMKSL 343
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
+ NA+++MY KCG + +A +F++MV RD VSW+ +I +G K + LF
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403
Query: 340 EMQRLKVPPNDITFIGLLSACA 361
M + + P++ T+ +L ACA
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACA 425
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 200/446 (44%), Gaps = 57/446 (12%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDV---CNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
++H LK + T +D+ CN+ D + + LF + N+ YNA+I Y
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCS--NQLFNSLPNHNLQSYNAIIVGYA 289
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
+ A+ +++ + + S + D+ +L ++CA + G Q+H K
Sbjct: 290 RSDKGIEALGMFRLLQK-----SGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLC 344
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+S+ NA+LD+YGKC L+E A ++F++
Sbjct: 345 QSNICVANAILDMYGKCGALVE-------------------------------ACLVFEE 373
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
M VSW A+I+ + G+ + L +F M G+EPDE + SVL ACA +L G
Sbjct: 374 MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCG 433
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
IH K+ + + + ALI+MY KCG + +A +L D++ E+ VVSW+ +I G +
Sbjct: 434 MEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ 493
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIE 387
++ +A F +M + V P++ T+ +L CA+ G ++ +K++ + I
Sbjct: 494 KQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS 553
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
LVD+ + G + I E+ P + D W +++ + + E L +
Sbjct: 554 --STLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQHG------LGEEALKIF 604
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSR 473
E Y+ L N+ H + V R
Sbjct: 605 E------YMQLENVKPNHATFLAVLR 624
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 165/378 (43%), Gaps = 47/378 (12%)
Query: 100 YKQMLRDPRTGSLILP-DKFTLPFVIKSCAG--LLCPSLGKQIHAHVCKFGLKSHSITEN 156
+K + P + P K T + + C+ LCP GKQ HA + K N
Sbjct: 24 FKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCP--GKQAHARMILTEFKPTVFVTN 81
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI-- 214
L+ +Y KC +L A KVF+ M RD V+WN ++ GYA G + A+ LFD MP T
Sbjct: 82 CLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGV 141
Query: 215 -----------------VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL- 256
++ ++ + + + + + +G + D ++ ++L
Sbjct: 142 VELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLD 201
Query: 257 ---PACAQ----LGSLELGE----------WIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
C Q G LEL + +H + K VI A ++MY+KC
Sbjct: 202 MYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNN 261
Query: 300 INQAS-QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
++ S QLF+ + ++ S++ +I G A K +A+ +F +Q+ + ++++ G
Sbjct: 262 LSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXR 321
Query: 359 ACAHTGFWNEGLMYFD-SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
ACA EGL SMK + I ++D+ G+ G L +A + EEM + D
Sbjct: 322 ACAVIKGDLEGLQVHGLSMKS--LCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRD 378
Query: 418 AKIWGSLLSSCRTYSNLE 435
A W +++++ N E
Sbjct: 379 AVSWNAIIAAHEQNGNEE 396
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 129/278 (46%), Gaps = 36/278 (12%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ IL +C NL+ + K+IH QI+K L ++ + ++D+ + G++ L+F++
Sbjct: 518 YATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 577
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--GLL 131
+ +NAM+ Y + L A+ +++ M + + P+ T V+++C GL+
Sbjct: 578 NRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLEN-----VKPNHATFLAVLRACGHMGLV 632
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLI 190
L H+ + +GL + ++D+ G+ ++ +A ++ E M + D V W L+
Sbjct: 633 EKGL-HYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 691
Query: 191 SGYARLGQMKKARMLFDKMPYTTI-------VSWTAMISGYTHIGSYAEALDVFRQMQMV 243
S G ++ A +K Y+ + ++ + + Y + G + E + + M+
Sbjct: 692 SXCKIHGNVEVA----EKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFN 747
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNH 279
G++ + P C+ +E+ +H + DK H
Sbjct: 748 GLKKE--------PGCSW---IEIKSEVHAFLVGDKAH 774
>gi|87240913|gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 497
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 261/450 (58%), Gaps = 33/450 (7%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS----- 134
+ + I + N+ + A + + QML + + P+ TL ++ +CA PS
Sbjct: 55 WTSSISHHCKNNNFLKAASEFIQMLE-----AEVEPNHITLITLLSACAH--SPSKTSIT 107
Query: 135 LGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G +H H K G + + AL+D+Y KC +L A VF++M R++V+WN +I GY
Sbjct: 108 FGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGY 167
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G + A LFDK+P +VSWT +I G+ Y EAL+ FR+MQ+ G+ PD ++++
Sbjct: 168 MKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVI 227
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+++ ACA LG+L LG W+H K + N+LI+MY +CGCI A Q+FD M +R
Sbjct: 228 AIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQR 287
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
++VSW+++I G A +G A KA+ F C+H G +EGL F
Sbjct: 288 NLVSWNSIIVGFAVNGLADKALSFF--------------------PCSHAGLIDEGLKIF 327
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+KRDH +IEHYGCLVDL RAGRL +A ++I++MPM P+ + GSLL++CRT +
Sbjct: 328 ADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGD 387
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A M++ + L P NYVL SNIYA G+W+ S++R+ ++ + ++K S IE
Sbjct: 388 VELAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIE 447
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
+++ + +FVSGD I+ LELL+
Sbjct: 448 IDSGIHKFVSGDKYHEENDYIYSALELLSF 477
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 43/289 (14%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MID GD+ A LF ++ NV + +I + Y A+ +++M +
Sbjct: 163 MIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQL-----A 217
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
++PD T+ +I +CA L LG +H V K + + N+L+D+Y +C + A
Sbjct: 218 GVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELA 277
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF--------------------DKMPY 211
+VF+ M+ R++V+WN++I G+A G KA F D
Sbjct: 278 RQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFPCSHAGLIDEGLKIFADIKRDHRNS 337
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI 271
I + ++ Y+ G EA DV ++M M+ P+E+ + S+L AC G +EL E +
Sbjct: 338 PRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMM---PNEVVLGSLLAACRTQGDVELAEKV 394
Query: 272 HMY-------CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
Y D N++L + Y G + AS++ +M ER
Sbjct: 395 MKYQVELYPGGDSNYVLFSNI--------YAAVGKWDGASKVRREMKER 435
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 37/246 (15%)
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL---GSLELGEWI 271
VSWT+ IS + ++ +A F QM +EP+ I+++++L ACA S+ G +
Sbjct: 53 VSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAAL 112
Query: 272 HMYCDKNHL-LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
H + K+ + ++ ALI+MY KCG ++ A +FDQM R++VSW+T+I G +G
Sbjct: 113 HTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGD 172
Query: 331 AHKAIHL-------------------------------FHEMQRLKVPPNDITFIGLLSA 359
A+ L F EMQ V P+ +T I ++SA
Sbjct: 173 VDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISA 232
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
CA+ G GL + + ++ L+D+ R G ++ A + + M + +
Sbjct: 233 CANLGALGLGL-WVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQR-NLV 290
Query: 420 IWGSLL 425
W S++
Sbjct: 291 SWNSII 296
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
NQ L + VSW++ I + KA F +M +V PN IT I LLSAC
Sbjct: 38 NQTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSAC 97
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-----CLVDLLGRAGRLDQALNIIEEMPMK 415
AH+ ++ + F + H +H L+D+ + G+LD A + ++M ++
Sbjct: 98 AHSP--SKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVR 155
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/510 (35%), Positives = 277/510 (54%), Gaps = 65/510 (12%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
+IH Q+++ L + T +ID+ G + YA +F ++ N+ +NAMI
Sbjct: 246 EIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG----- 300
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
M D + ++PD T+ ++ SC+ GK IH + +
Sbjct: 301 -----------MQEDDK----VIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPY 345
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
+ E AL+D+YGKC G++K A +F++M
Sbjct: 346 LVLETALVDMYGKC-------------------------------GELKLAEHVFNQMNE 374
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI 271
+VSW M++ Y Y EAL +F+ + ++PD I+I SVLPA A+L S G+ I
Sbjct: 375 KNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQI 434
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H Y K L T I NA++ MY KCG + A + FD MV +DVVSW+T+I A HG
Sbjct: 435 HSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFG 494
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
+I F EM+ PN TF+ LL+AC+ +G +EG +F+SMK ++ I+ IEHYGC
Sbjct: 495 RTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGC 554
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
++DLLGR G LD+A IEEMP+ P A+IWGSLL++ R ++++ +A +A H+L L+ ++
Sbjct: 555 MLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDN 614
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFL 511
TG YVLLSN+YA+ GRWEDV R++ L++ + + KT GCS++++N + F++ D +
Sbjct: 615 TGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHA-- 672
Query: 512 KDIFWLLELLALHQDRAKDVIDIMYEDIGE 541
H + DV+DI+ + IGE
Sbjct: 673 ------------HTNLIYDVLDILLKKIGE 690
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 189/394 (47%), Gaps = 55/394 (13%)
Query: 54 DVCN--SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
D+C G + A +F+++ + F++N +IR YTNN L+ AI+ Y +M +
Sbjct: 64 DLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEG---- 119
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
I D FT PFVIK+C LL +G+++H + K G
Sbjct: 120 -IRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGF----------------------- 155
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
D D+ N LI Y ++G ++ A +FD+MP +VSW +M+SGY G
Sbjct: 156 --------DLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGL 207
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
+L F++M +G + D ++S L AC+ L G IH ++ L ++ +LI
Sbjct: 208 SSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLI 267
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
+MY KCG ++ A ++F+++ +++V+W+ +IGG+ + KV P+ I
Sbjct: 268 DMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGM---------------QEDDKVIPDVI 312
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T I LL +C+ +G EG R + + + LVD+ G+ G L A ++ +
Sbjct: 313 TMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETA-LVDMYGKCGELKLAEHVFNQ 371
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
M K + W +++++ + A+ +H+L
Sbjct: 372 MNEK-NMVSWNTMVAAYVQNEQYKEALKMFQHIL 404
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 166/356 (46%), Gaps = 54/356 (15%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++++C L+ L +K+H +++K ++ +ID+ G + A +F ++
Sbjct: 127 FPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMP 186
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
++ +N+M+ Y + ++ +K+MLR D+F + + +C+ C
Sbjct: 187 VRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKA-----DRFGMISALGACSIEHCL 241
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G +IH V + L+ + + +L+D+YGKC
Sbjct: 242 RSGMEIHCQVIRSELELDIMVQTSLIDMYGKC---------------------------- 273
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G++ A +F+++ IV+W AMI G + PD I+++
Sbjct: 274 ---GKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDK---------------VIPDVITMI 315
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
++LP+C+Q G+L G+ IH + + L V+ AL++MY KCG + A +F+QM E+
Sbjct: 316 NLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEK 375
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
++VSW+T++ + + +A+ +F + + P+ IT +L A A +EG
Sbjct: 376 NMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEG 431
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 49/276 (17%)
Query: 3 ARIGALSIKELEDRFVP-------ILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKM 52
A IG + + +D+ +P +L SC L+E K IH ++ + L T +
Sbjct: 296 AMIGGM---QEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETAL 352
Query: 53 IDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL 112
+D+ G+L A +F Q+ E N+ +N M+ AY N Y A+ +++ +L +P
Sbjct: 353 VDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEP----- 407
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
+ PD T+ V+ + A L S GKQIH+++ K GL S++ NA++ +Y KC +L A
Sbjct: 408 LKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAR 467
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
+ F+ M +D+V+WN +I YA I G+
Sbjct: 468 EFFDGMVCKDVVSWNTMIMAYA--------------------------IHGFGRT----- 496
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
++ F +M+ G +P+ + VS+L AC+ G ++ G
Sbjct: 497 SIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEG 532
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 281/507 (55%), Gaps = 5/507 (0%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
KKIH QI+K L+Q L ++D L A LF ++ + + + +++ AY
Sbjct: 22 KKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQA 81
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
L ++++ M R + PD F ++K+CA L LGKQ+HA
Sbjct: 82 KLPNKTLSIFHYMFTTDR----LQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVD 137
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+ +++L+D+Y KC A VF+ + + V+W ++SGYAR G +A LF + P
Sbjct: 138 DDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTP 197
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLELGE 269
+ SWTA+ISG G + +F +M+ G++ D + + SV+ ACA L L LG+
Sbjct: 198 VRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGK 257
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
IH + I NAL++MY KC I A +F++M+ RDVVSW+++I G A HG
Sbjct: 258 QIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHG 317
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+A +A+ L+ +M ++ PN++TF+GL+ AC+H G ++G F +M D+ I ++ +
Sbjct: 318 RAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLF 377
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
C +DLL R+G L++A ++I+ MP KPD W +LLS+C+ + N E+ V + LL L
Sbjct: 378 TCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNM 437
Query: 450 EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
+ YVLLSN+YA G+WE +SR+RKL+ +K+ PG S I++ E Q F +G+ P
Sbjct: 438 HEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHP 497
Query: 510 FLKDIFWLLELLALHQDRAKDVIDIMY 536
+IF LL+ L + + D Y
Sbjct: 498 MKDEIFGLLKELDAEMRKRGYIPDTSY 524
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 38/258 (14%)
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+K C P K+IHA + K GL N LLD YGKC+ L +AH +F+EM RD
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
V+W ++++ Y + K+P T L +F M
Sbjct: 69 VSWASILTAYNQA-----------KLPNKT--------------------LSIFHYMFTT 97
Query: 244 G-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
++PD ++L ACA L SL LG+ +H + + V+ ++L++MY KCG +
Sbjct: 98 DRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSI 157
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACA 361
A +FD ++ + VSW+ ++ G A G +A+ LF L+ P ++ ++ L+S
Sbjct: 158 ARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELF-----LRTPVRNLYSWTALISGLV 212
Query: 362 HTGFWNEGLMYFDSMKRD 379
+G+ +G F M+R+
Sbjct: 213 QSGYCIDGCYMFIEMRRE 230
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 272/470 (57%), Gaps = 7/470 (1%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI G + A + F+Q+ E +V +NAMI Y + A++++ +ML D +
Sbjct: 217 MISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSK- 275
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
PDKFTL + +CA L LGKQIHAH+ + + NAL+ +Y K + A
Sbjct: 276 ---PDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIA 332
Query: 172 HKVFEE--MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
K+ E+ +++ D++A+ L+ GY +LG + AR +FD + +V+WTAMI GY G
Sbjct: 333 QKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGF 392
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
+A+++FR M G +P+ ++ ++L + L SL+ G IH ++ + NA
Sbjct: 393 NQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNA 452
Query: 290 LIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
LI MY K G IN A +F+ + +RD ++W+++I LA HG +A+ LF M + P
Sbjct: 453 LITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKP 512
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+ IT++G+LSAC H G +G Y++ M+ H I HY C++DL GRAG L +A
Sbjct: 513 DHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAF 572
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
IE MP++PD WGSLL+SC+ + N+E+A +A E LL++EPE++G Y L+N+Y+ G+W
Sbjct: 573 IENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQW 632
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
E+ + +RK ++ K +KK G S +++ N+V F D P I+ ++
Sbjct: 633 ENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMM 682
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 203/421 (48%), Gaps = 40/421 (9%)
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
GG L A +F+++ EP+ + AMI Y + AI ++++M+ D + P +F
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDD-----VPPTQF 146
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
TL V+ SCA + C +G+++H+ V K GL S+ N+LL++Y K + + A VF+ M
Sbjct: 147 TLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRM 206
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+ +WN +IS + + G + A++ F++M +VSW AMISGY G EALD+F
Sbjct: 207 KLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFS 266
Query: 239 QMQM-VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM---- 293
+M M +PD+ ++ S L ACA L +L+LG+ IH + + + NALI M
Sbjct: 267 KMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKS 326
Query: 294 -----------------------------YIKCGCINQASQLFDQMVERDVVSWSTVIGG 324
Y+K G IN A ++FD + RDVV+W+ +I G
Sbjct: 327 GGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVG 386
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
+G A+ LF M + PN+ T +LS + + G S R +
Sbjct: 387 YVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNAS- 445
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ L+ + ++G ++ A + + K D W S++ + + E A+ E +
Sbjct: 446 SVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERM 505
Query: 445 L 445
L
Sbjct: 506 L 506
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 163/342 (47%), Gaps = 53/342 (15%)
Query: 106 DPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC 165
DP T L KF PF GK IHA + K GL N L++ Y K
Sbjct: 14 DPYTSFLQRSLKFKDPFT------------GKSIHARIIKAGLHLGVFLMNNLMNFYAKT 61
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
+ +AH+VF+EM + + +WN ++SGYA+ G++++A +F++MP VSWTAMI GY
Sbjct: 62 GFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYN 121
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
+G + A+ +FR+M + P + ++ +VL +CA + L +G +H + K+ L
Sbjct: 122 QMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYIS 181
Query: 286 ICNALIEMYIK-------------------------------CGCINQASQLFDQMVERD 314
+ N+L+ MY K G ++ A F+QM+ERD
Sbjct: 182 VANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERD 241
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
VVSW+ +I G HG +A+ +F +M P+ T LSACA N +
Sbjct: 242 VVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACA-----NLENLKL 296
Query: 374 DSMKRDHHIEHKIEHYG----CLVDLLGRAGRLDQALNIIEE 411
H I + + +G L+ + ++G ++ A IIE+
Sbjct: 297 GKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQ 338
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 48/335 (14%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD-PR 108
T ++D GD+ A +F ++ +V + AMI Y N A+ L++ M+++ P+
Sbjct: 350 TALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPK 409
Query: 109 TGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDEL 168
P+ +TL ++ + L G+QIHA + G S NAL+ +Y K +
Sbjct: 410 ------PNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSI 463
Query: 169 IEAHKVFEEMT-DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
+A VF + RD + W ++I A+ G ++A LF++M I
Sbjct: 464 NDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGI------------- 510
Query: 228 GSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC 287
+PD I+ V VL AC +G +E G + H + T
Sbjct: 511 ------------------KPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSH 552
Query: 288 NA-LIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFH-EMQRL 344
A +I+++ + G + +A + M +E DV++W G L K HK + L +RL
Sbjct: 553 YACMIDLFGRAGLLQEAHAFIENMPIEPDVIAW----GSLLASCKVHKNVELAEVAAERL 608
Query: 345 KV--PPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
+ P N + L + + G W SMK
Sbjct: 609 LLIEPENSGAYSALANVYSACGQWENAANIRKSMK 643
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 185/511 (36%), Positives = 279/511 (54%), Gaps = 37/511 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+P + + L K +H ++ + T ++D+ L YA +F + N
Sbjct: 217 LPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNE 276
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++AMI Y + A+ L+ QM L+D P TL V+++CA L S G
Sbjct: 277 VSWSAMIGGYVASDCMKEALELFDQMILKDAMD-----PTPVTLGSVLRACAKLTDLSRG 331
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+++H ++ K G + DI+ N L+S YA+
Sbjct: 332 RKLHCYIIKLG-------------------------------SVLDILLGNTLLSMYAKC 360
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A FD+M VS++A++SG G+ A AL +FR MQ+ GI+PD +++ VL
Sbjct: 361 GVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL 420
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
PAC+ L +L+ G H Y T+ICNALI+MY KCG I+ A ++F++M D+V
Sbjct: 421 PACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIV 480
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+ +I G HG +A+ LFH++ L + P+DITFI LLS+C+H+G EG ++FD+M
Sbjct: 481 SWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAM 540
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
RD I ++EH C+VD+LGRAG +D+A + I MP +PD +IW +LLS+CR + N+E+
Sbjct: 541 SRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIEL 600
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ + L PE TGN+VLLSNIY+ GRW+D + +R + +KK PGCS IE+N
Sbjct: 601 GEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEING 660
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
V FV GD + L I LE L + R
Sbjct: 661 IVHAFVGGDQSHLQLSQINRKLEELLVEMKR 691
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/456 (30%), Positives = 223/456 (48%), Gaps = 62/456 (13%)
Query: 12 ELEDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
E+++ ++ +L++C ++L E KKIH LK + + ++ K+ + S + A L
Sbjct: 6 EVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRL 65
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F ++ P+V L+N +IRAY N + AI+LY ML + P+K+T PFV+K+C+
Sbjct: 66 FDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLG-----VRPNKYTYPFVLKACS 120
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
GLL G +IH+H FGL+S AL+D Y KC L+EA ++F M+ RD+VAWN
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWN- 179
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
AMI+G + G +A+ + QMQ GI P+
Sbjct: 180 ------------------------------AMIAGCSLYGLCDDAVQLIMQMQEEGICPN 209
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+IV VLP + +L G+ +H YC + V+ L++MY KC C+ A ++FD
Sbjct: 210 SSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFD 269
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWN 367
M R+ VSWS +IGG +A+ LF +M + + P +T +L ACA
Sbjct: 270 VMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAK----- 324
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLL---------GRAGRLDQALNIIEEMPMKPDA 418
+ R + I G ++D+L + G +D A+ +EM K D+
Sbjct: 325 -----LTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPK-DS 378
Query: 419 KIWGSLLSSCRTYSNLEIA--VIAMEHLLVLEPEDT 452
+ +++S C N +A + M L ++P+ T
Sbjct: 379 VSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLT 414
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 149/324 (45%), Gaps = 7/324 (2%)
Query: 158 LLDLYGKCDELIEAHKV----FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
LL+ + L EA K+ + ++ D + L Y Q+ AR LFD++P +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
++ W +I Y G + A+D++ M +G+ P++ + VL AC+ L ++E G IH
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
+ L +C AL++ Y KCG + +A +LF M RDVV+W+ +I G + +G
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
A+ L +MQ + PN T +G+L G R + G L+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG-LL 252
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
D+ + L A I + M ++ + W +++ ++ A+ + +++ + D
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVS-WSAMIGGYVASDCMKEALELFDQMILKDAMDP- 310
Query: 454 NYVLLSNIYAKHGRWEDVSRMRKL 477
V L ++ + D+SR RKL
Sbjct: 311 TPVTLGSVLRACAKLTDLSRGRKL 334
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 274/510 (53%), Gaps = 41/510 (8%)
Query: 17 FVPILQSCENL---IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +SC +L + ++H ++K F+ T +I + +A A +F +
Sbjct: 59 FPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENH 118
Query: 74 EPN--VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
YNA+I Y+ N + A+ L++QM ++ + + T+ +I CAG +
Sbjct: 119 HSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEG-----VSVNAVTMLGLIPVCAGPI 173
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
G +HA +FGL D D+ N L++
Sbjct: 174 HLGFGTSLHACSVRFGL-------------------------------DGDLSVGNCLLT 202
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
Y R G + AR LFD MP +++W AMISGY G LD++R+M+ GI PD ++
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVT 262
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+V VL +CA LG+ G + + + + NALI MY +CG + +A +FD M
Sbjct: 263 LVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMT 322
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E++V+SW+ +I G HG+ A+ LF EM P+ F+ +LSAC+H G +GL
Sbjct: 323 EKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLY 382
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
YF +M+RD+ ++ EHY C+VDLLGRAGRL++A +I M ++PD +WG+LL +C+ +
Sbjct: 383 YFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIH 442
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+E+A +A E ++ EP + G YVLLSNI+++ G E + R+R ++R + +KK PGCS
Sbjct: 443 RNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSY 502
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+E + F++GD T P ++I+ +L+ L
Sbjct: 503 VEYQGRIHLFLAGDRTHPQAQEIYHMLDGL 532
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 201/453 (44%), Gaps = 98/453 (21%)
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
+NA +R + A+NLY QML + P+ FT PF KSCA L P G Q+
Sbjct: 24 WNARLRELARQRHFQEALNLYCQMLASGDS-----PNAFTFPFAFKSCASLSLPLAGSQL 78
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE-MTDRDI-VAWNNLISGYARLG 197
H HV K G + + +L+ +Y KC + A KVF+E R++ V +N LI+GY+
Sbjct: 79 HGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNS 138
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ +++A+ +FRQM+ G+ + ++++ ++P
Sbjct: 139 R-------------------------------FSDAVLLFRQMRKEGVSVNAVTMLGLIP 167
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
CA L G +H + L + N L+ MY++CG ++ A +LFD M E+ +++
Sbjct: 168 VCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLIT 227
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G A +G A + L+ +M+ + P+ +T +G+LS+CAH G G
Sbjct: 228 WNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAG-------- 279
Query: 378 RDHHIEHKIEHYG---------CLVDLLGRAGRLDQALNIIEEMPMK------------- 415
+E +IE G L+++ R G L +A I + M K
Sbjct: 280 --REVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYG 337
Query: 416 ---------------------PDAKIWGSLLSSCRTYSNLEIAV---IAMEHLLVLEPED 451
PD + S+LS+C E + AME L+P
Sbjct: 338 MHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGP 397
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+Y + ++ + GR E+ RKLI S S++
Sbjct: 398 E-HYSCVVDLLGRAGRLEEA---RKLIGSMSVE 426
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 10/221 (4%)
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWI 271
T SW A + + EAL+++ QM G P+ + +CA L G +
Sbjct: 19 NTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQL 78
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ--MVERDVVSWSTVIGGLANHG 329
H + K + +LI MY KC I A ++FD+ V ++ +I G + +
Sbjct: 79 HGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNS 138
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACA---HTGFWNEGLMYFDSMKRDHHIEHKI 386
+ A+ LF +M++ V N +T +GL+ CA H GF + ++ +
Sbjct: 139 RFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTS----LHACSVRFGLDGDL 194
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
CL+ + R G +D A + + MP K W +++S
Sbjct: 195 SVGNCLLTMYVRCGSVDFARKLFDGMPEK-GLITWNAMISG 234
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 266/445 (59%), Gaps = 9/445 (2%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E N+ +N ++ + + + A+ +++++ G PD+ T+ V+ S
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKI---HHLG--FCPDQVTVSSVLPSVGDSEML 268
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
++G+ IH +V K GL +A++D+YGK + +F + + N I+G
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 194 ARLGQMKKARMLFDKMPYTT----IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+R G + KA +F+ T +VSWT++I+G G EAL++FR+MQ+ G++P+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++I S+LPAC + +L G H + + HLL + +ALI+MY KCG IN + +F+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M +++V W++++ G + HGKA + + +F + R ++ P+ I+F LLSAC G +EG
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF M ++ I+ ++EHY C+V+LLGRAG+L +A ++I+EMP +PD+ +WG+LL+SCR
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+N+++A IA E L LEPE+ G YVLLSNIYA G W +V +R + S +KK PGC
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDI 514
S I+V N V ++GD + P + I
Sbjct: 629 SWIQVKNRVYTLLAGDKSHPQIDQI 653
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 229/470 (48%), Gaps = 50/470 (10%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
+ H +ILK ++ K+I ++ A L+ + + +P ++ ++++I A T
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
L+ +I ++ +M ++PD LP + K CA L +GKQIH C GL
Sbjct: 96 LFTQSIGVFSRMFSHG-----LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
+ + ++ +Y +C + +A KVF+ M+D+D+V + L+ YAR G +++ + +M
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 212 T----TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
+ IVSW ++SG+ G + EA+ +F+++ +G PD++++ SVLP+ L +
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKC------------------------------ 297
G IH Y K LL+ + +A+I+MY K
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 298 -GCINQASQLF----DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
G +++A ++F +Q +E +VVSW+++I G A +GK +A+ LF EMQ V PN +T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-CLVDLLGRAGRLDQALNIIEE 411
+L AC + G R H +++ H G L+D+ + GR++ + +
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIVFNM 448
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL--VLEPEDTGNYVLLS 459
MP K + W SL++ + + + E L+ L+P+ LLS
Sbjct: 449 MPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/503 (35%), Positives = 268/503 (53%), Gaps = 36/503 (7%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
K IH +K L + ++D+ G++ A L F+ V +V L++ MI Y
Sbjct: 652 KGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQC 711
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ A L+ +M+R S + P++F+L V+++CA + LGKQIH H K G +S
Sbjct: 712 NQNEQAFELFIRMMR-----SSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHES 766
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
NAL+DLY KC + M+ + +F +
Sbjct: 767 ELFVGNALIDLYAKCSD-------------------------------MESSLEIFSSLR 795
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
VSW +I GY+ G AL VFR+M+ + +++ SVL ACA S+
Sbjct: 796 DVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQ 855
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
+H +K+ T++ N+LI+ Y KCGCI A ++F+ + E D+VSW+ +I G A HG+
Sbjct: 856 VHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQ 915
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
A A LF M + + NDITF+ LLS C TG ++GL FDSM+ DH IE +EHY
Sbjct: 916 AAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYT 975
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C+V LLGRAGRL+ ALN I ++P P A +W +LLSSC + N+E+ + E +L +EP+
Sbjct: 976 CIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQ 1035
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
D YVLLSN+Y+ G + V+ RK +R+ ++K PG S +E+ EV F G + P
Sbjct: 1036 DETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPC 1095
Query: 511 LKDIFWLLELLALHQDRAKDVID 533
++ I +LE L L R V D
Sbjct: 1096 MRVINAMLEWLNLKAIREGYVPD 1118
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 151/335 (45%), Gaps = 36/335 (10%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H K ++ F+ + +ID + G ++ A +F + + + AM+ Y+ N
Sbjct: 553 VHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDC 612
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
+ ++ +M R L + F L V+++ L LGK IHA K +
Sbjct: 613 PENTLQIFSKM----RVAVSKL-NPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTER 667
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
ALLD+Y KC G ++ AR+ F+ +
Sbjct: 668 HVYGALLDMYAKC-------------------------------GNIEDARLAFEMVTND 696
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
++ W+ MIS Y +A ++F +M + P+E S+ SVL ACA + L+LG+ IH
Sbjct: 697 DVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIH 756
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ K + NALI++Y KC + + ++F + + + VSW+T+I G + G
Sbjct: 757 NHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGE 816
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
A+ +F EM+ VP +T+ +L ACA T N
Sbjct: 817 AALSVFREMRAASVPSTQVTYSSVLRACASTASIN 851
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 158/370 (42%), Gaps = 45/370 (12%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
F ++++ G A +F + E N+ + +++ + + A L++++ +
Sbjct: 466 FCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWE 525
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
G + ++F L V+K + L +HA CK G ++ +AL+D Y C
Sbjct: 526 ---GHEV--NQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCG 580
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ +A +VF+ + +D VAW TAM+S Y+
Sbjct: 581 VVSDARRVFDGIVGKDAVAW-------------------------------TAMVSCYSE 609
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
L +F +M++ + + ++ SVL A L S+ LG+ IH K +
Sbjct: 610 NDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHV 669
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
AL++MY KCG I A F+ + DV+ WS +I A + +A LF M R V
Sbjct: 670 YGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSV 729
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE--HKIEHY--GCLVDLLGRAGRL 402
PN+ + +L ACA N L+ +H I+ H+ E + L+DL + +
Sbjct: 730 SPNEFSLSSVLQACA-----NMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDM 784
Query: 403 DQALNIIEEM 412
+ +L I +
Sbjct: 785 ESSLEIFSSL 794
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 126/248 (50%), Gaps = 13/248 (5%)
Query: 9 SIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
S+ E +LQ+C N+ L K+IH +K F+ +ID+ D+ +
Sbjct: 728 SVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESS 787
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F +++ N +N +I Y+ + A++++++M R S + + T V++
Sbjct: 788 LEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREM----RAAS-VPSTQVTYSSVLR 842
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA + Q+H + K S +I N+L+D Y KC + +A ++FE + + D+V+
Sbjct: 843 ACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVS 902
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQ 241
WN +ISGYA GQ A+ LFD M +I +++ A++S G ++ L +F M+
Sbjct: 903 WNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMR 962
Query: 242 MV-GIEPD 248
+ GIEP
Sbjct: 963 LDHGIEPS 970
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 150/338 (44%), Gaps = 40/338 (11%)
Query: 95 LAINLYKQMLRDPRTGSLILP----DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
LA N Q L D T SL P D + +++ C G+ +H HV + G
Sbjct: 403 LAANAALQWLEDELT-SLAFPWPGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSG--- 458
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
A LDL+ N L++ Y ++G A +FD +P
Sbjct: 459 ----GLARLDLFCA----------------------NVLLNMYTKVGPFGSAHRVFDGLP 492
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+VS+ ++ G+ G + EA +F++++ G E ++ + +VL + +L L
Sbjct: 493 ERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWG 552
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
+H K R + +ALI+ Y CG ++ A ++FD +V +D V+W+ ++ + +
Sbjct: 553 VHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDC 612
Query: 331 AHKAIHLFHEMQRL--KVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
+ +F +M+ K+ P +T + + C + +G+ + S+K + E +
Sbjct: 613 PENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGI-HACSVKTLYDTERHV-- 669
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
YG L+D+ + G ++ A + EM D +W ++S
Sbjct: 670 YGALLDMYAKCGNIEDA-RLAFEMVTNDDVILWSLMIS 706
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 278/506 (54%), Gaps = 39/506 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
VP+ L LK++H LK L + G L+YA +F ++ +
Sbjct: 386 VPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTL 445
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+NA+I Y + L+++ + QM S +LPD FT+ ++ +C+ L LGK
Sbjct: 446 NSWNALIGGYAQSSDPRLSLDAHLQM-----KNSGLLPDNFTVCSLLSACSKLKSLRLGK 500
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
++H + + L +RD+ + +++S Y G
Sbjct: 501 EVHGFIIRNWL-------------------------------ERDLFVYLSVLSLYIHCG 529
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
++ ++LFD M ++VSW +I+G+ G AL +FRQM + GI+P IS+++V
Sbjct: 530 ELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFG 589
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
AC+ L SL LG H Y K+ L I ++I+MY K G I Q+S++F+ + E+ S
Sbjct: 590 ACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAAS 649
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G HG+A +AI LF EMQR P+D+TF+G+L+AC H+G +EGL Y D MK
Sbjct: 650 WNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMK 709
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
++ ++HY C++D+LGRAG+LD AL + EM +PD IW SLLS CR + NLE+
Sbjct: 710 SSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMG 769
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
L VLEPE NYVLLSN+YA G+W+DV ++R+ ++ S++K GCS IE+N +
Sbjct: 770 EKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGK 829
Query: 498 VQEFVSGD---DTKPFLKDIFWLLEL 520
V FV G+ D +K ++ +LE+
Sbjct: 830 VFSFVVGERFLDGFEEIKSLWSILEM 855
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 155/324 (47%), Gaps = 55/324 (16%)
Query: 42 LSQSNFLVTKMIDV---CNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAIN 98
L + L T++I + C S D A F ++ N+F +NA+I +Y+ N LY +
Sbjct: 116 LRSDDVLCTRIITMYAMCGSPDDSRSA---FDALRSKNLFQWNAVISSYSRNELYHEVLE 172
Query: 99 LYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENAL 158
++ +M+ + + +LPD FT P VIK+CAG+ +G +H V K GL NAL
Sbjct: 173 MFIKMI----SKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNAL 228
Query: 159 LDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWT 218
+ YG + +A K+F+ M +R++V+WN++I ++ G
Sbjct: 229 VSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD-------------------- 268
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
G++ PD ++V+VLP CA+ + +G+ +H + K
Sbjct: 269 --------DGAFM---------------PDVATVVTVLPVCAREREIGVGKGVHGWAVKL 305
Query: 279 HLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLF 338
L + V+ NAL++MY K GCI + +F ++VVSW+T++GG + G H L
Sbjct: 306 SLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLL 365
Query: 339 HEM--QRLKVPPNDITFIGLLSAC 360
+M V +++T + + C
Sbjct: 366 RQMLAGSEDVKADEVTILNAVPVC 389
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 187/419 (44%), Gaps = 55/419 (13%)
Query: 18 VPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V +L C E+ K +H +K L + + ++D+ + G + + ++FK
Sbjct: 280 VTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNN 339
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG-LLCP 133
NV +N M+ ++ +L +QML + D+ T+ + C + P
Sbjct: 340 KNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSED---VKADEVTILNAVPVCFDESVLP 396
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
SL K++H + LK + DEL+ N ++ Y
Sbjct: 397 SL-KELHC----YSLKQEFVY-----------DELLA----------------NAFVASY 424
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G + A+ +F + T+ SW A+I GY +LD QM+ G+ PD ++
Sbjct: 425 AKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVC 484
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L AC++L SL LG+ +H + +N L R + +++ +YI CG + LFD M +
Sbjct: 485 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDN 544
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+VSW+TVI G +G +A+ LF +M + P I+ + + AC+ L+
Sbjct: 545 SLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACS--------LLPS 596
Query: 374 DSMKRDHH---IEHKIEHYG----CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ R+ H ++H +E ++D+ + G + Q+ + + K A W +++
Sbjct: 597 LRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAAS-WNAMI 654
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 160/351 (45%), Gaps = 55/351 (15%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++++C + ++ +H ++K L + F+ ++ + G ++ A LF +
Sbjct: 190 FPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMP 249
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E N+ +N+MIR +++N G +PD T+ V+ CA
Sbjct: 250 ERNLVSWNSMIRVFSDNGDDGA-----------------FMPDVATVVTVLPVCAREREI 292
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+GK +H K L + NAL+D+Y K +I++ +F+ ++++V+WN ++ G+
Sbjct: 293 GVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGF 352
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG---IEPDEI 250
+ G + G++ D+ RQM + G ++ DE+
Sbjct: 353 SAEGDIH---------------------------GTF----DLLRQM-LAGSEDVKADEV 380
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+I++ +P C L + +H Y K + ++ NA + Y KCG ++ A ++F +
Sbjct: 381 TILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGI 440
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+ + SW+ +IGG A ++ +M+ + P++ T LLSAC+
Sbjct: 441 RSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACS 491
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 141/317 (44%), Gaps = 43/317 (13%)
Query: 13 LEDRFV--PILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
L D F +L +C L L K++H I++ L + F+ ++ + G+L +
Sbjct: 477 LPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQV 536
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
LF +++ ++ +N +I + N A+ L++QM+ I P ++ V +C
Sbjct: 537 LFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYG-----IQPCGISMMTVFGAC 591
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+ L LG++ HA+ K L+ ++ +++D+Y K + ++ KVF + ++ +WN
Sbjct: 592 SLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWN 651
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+I GY G+ K EA+ +F +MQ G P
Sbjct: 652 AMIMGYGMHGRAK-------------------------------EAIKLFEEMQRTGRNP 680
Query: 248 DEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
D+++ + VL AC G L G ++ L +I+M + G ++ A ++
Sbjct: 681 DDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRV 740
Query: 307 FDQMVER-DVVSWSTVI 322
+M E DV W++++
Sbjct: 741 AAEMSEEPDVGIWNSLL 757
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRT-VICNALIEMYIKCGCINQASQLFDQMVER 313
+L A + +E+G IH + LR V+C +I MY CG + + FD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACA-----HTGFWN 367
++ W+ VI + + H+ + +F +M + + P++ TF ++ ACA G
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
GL+ + D + + LV G G + AL + + MP + + W S++
Sbjct: 210 HGLVVKTGLVEDLFVGN------ALVSFYGTHGFVSDALKLFDIMPER-NLVSWNSMI-- 260
Query: 428 CRTYSN 433
R +S+
Sbjct: 261 -RVFSD 265
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 232/385 (60%), Gaps = 6/385 (1%)
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE--MTDRDIVAWNNLISGYARLG 197
H K G +H + N LL LY L +A +VF+ T D +WN ++SGY + G
Sbjct: 139 HGQALKHGALAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGKCG 198
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
++ AR +F +MP +VSW+AMI G ++EAL +F QM G PD + + SVL
Sbjct: 199 DLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSVLK 258
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLR---RTVICNALIEMYIKCGCINQASQLFDQMVERD 314
ACA LG+LE G W+H + L R ++ AL++MY KCGC+++A +FD + +D
Sbjct: 259 ACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQSQD 318
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VV W+ +IGGLA +G +A+ LF M + PN+ TF+ +L AC HTG +EG F
Sbjct: 319 VVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKEIFR 378
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
SM DH IE + EHYGCL DLLGRAG L++A ++ +MPM+P A WG+L+SSC ++N+
Sbjct: 379 SMC-DHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNNV 437
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
+ + L+ LEP+D G YV+L N+YA +G WED +RK++ + KK G S IE
Sbjct: 438 GVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIEW 497
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLE 519
N V EF SGD P + I+ LLE
Sbjct: 498 NGLVHEFRSGDTRHPQTRQIYALLE 522
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 43 SQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102
S F M+ GDL A +F ++ E + ++AMI A + A+ ++ Q
Sbjct: 181 SLDAFSWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQ 240
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL---KSHSITENALL 159
M+ G+ PD L V+K+CA L G+ +H + GL + + E AL+
Sbjct: 241 MM-----GNGFRPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALV 295
Query: 160 DLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV---- 215
D+Y KC + EA VF+ + +D+V WN +I G A G K+A LF +M V
Sbjct: 296 DMYCKCGCMDEAWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNES 355
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
++ ++ TH G E ++FR M GIEP
Sbjct: 356 TFVVVLCACTHTGRVDEGKEIFRSMCDHGIEP 387
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 20 ILQSCENLIELKK---IHTQILKYLLSQSN---FLVTKMIDVCNSGGDLAYASLLFKQVK 73
+L++C +L L++ +H + L +S L T ++D+ G + A +F V+
Sbjct: 256 VLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQ 315
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V L+NAMI N A+ L+++ML +P++ T V+ +C
Sbjct: 316 SQDVVLWNAMIGGLAMNGHGKRALELFRRML-----DMGFVPNESTFVVVLCACTHTGRV 370
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
GK+I +C G++ L DL G+ L EA V +M + W L+S
Sbjct: 371 DEGKEIFRSMCDHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMS 429
>gi|22331393|ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g28660
gi|9294280|dbj|BAB02182.1| unnamed protein product [Arabidopsis thaliana]
gi|20259531|gb|AAM13885.1| unknown protein [Arabidopsis thaliana]
gi|24030460|gb|AAN41382.1| unknown protein [Arabidopsis thaliana]
gi|332643950|gb|AEE77471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/513 (35%), Positives = 289/513 (56%), Gaps = 44/513 (8%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMID----VCNSGGDLAYASLLFKQVKEPNV 77
Q C + ++K H+ + + L ++ + ++K++ + N YAS +F ++ PN
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F+Y+ MIR + + L + + M+++ I P T F+I +C S+GK
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEED--ITPSYLTFHFLIVACLKACFFSVGK 136
Query: 138 QIHAHVCKFGL-KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
QIH V K G+ S + +L +Y +E +F+
Sbjct: 137 QIHCWVVKNGVFLSDGHVQTGVLRIY------VEDKLLFD-------------------- 170
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
AR +FD++P +V W +++GY G +E L+VF++M + GIEPDE S+ + L
Sbjct: 171 -----ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTAL 225
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDV 315
ACAQ+G+L G+WIH + K + V + AL++MY KCGCI A ++F+++ R+V
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNV 285
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFD 374
SW+ +IGG A +G A KA ++R + P+ + +G+L+ACAH GF EG +
Sbjct: 286 FSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+M+ + I K EHY C+VDL+ RAGRLD AL++IE+MPMKP A +WG+LL+ CRT+ N+
Sbjct: 346 NMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 435 EIAVIAMEHLLVLEP----EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
E+ +A+++LL LE E+ V LSNIY R + ++R +I + ++KTPG S
Sbjct: 406 ELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
L+EV+ V +FVSGD + P L I L+ LL++
Sbjct: 466 LLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSV 498
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 282/524 (53%), Gaps = 38/524 (7%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK--EPNVFLYNAMIRAYT 88
+++H Q+L L + + S YA +F V NV+L+ A + +Y
Sbjct: 25 RQLHAQLL---LRGLPLPARAAVTLIASSSSPQYARAIFDSVPAASANVYLWTATVSSYA 81
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
+ LA + + R+G P+ FT+ V+KS + L Q+H + K GL
Sbjct: 82 KHASPALAAEAFPLFMFMLRSGPR--PNGFTVSSVLKSLSKLRAAHQVCQVHGFLVKAGL 139
Query: 149 -------------------------------KSHSITENALLDLYGKCDELIEAHKVFEE 177
+S+ + NA++ Y K ++ A +VF+
Sbjct: 140 ASSLHVGATLLDSYGNLCRVKDARRVFDEMPRSNVVVGNAMVSGYVKAGDVEAARQVFDG 199
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M +RD ++WN L+SGY R G AR LFD+MP + SW MIS + +G +A+++ VF
Sbjct: 200 MVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQRNVNSWNMMISACSEVGLWADSVAVF 259
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
QM+ + PD ++ ++ ACAQLG L + ++ K + + N+L++M+ KC
Sbjct: 260 NQMRFMSFRPDAATMAVLMSACAQLGFLSVARQVYGLLRKGCVEMNCHVHNSLVDMFAKC 319
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
GC ++A LF +M +DVVS++ ++ LA+HG A+ LF +M + P+ +TF+G+L
Sbjct: 320 GCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHGKDALKLFEQMIEGGLQPDAVTFLGVL 379
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
SACAH G + G YF++M + IE +HY C+VDL GR G +++A ++ MP+KP
Sbjct: 380 SACAHAGLVDSGKYYFETMGTTYAIEKSADHYACMVDLYGRVGLIEEAHYFVKIMPVKPH 439
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
A IWG+LL++CR + N+++ +A L+ +EP + GNYVLLSN A +W+ V +R+L
Sbjct: 440 AGIWGALLNACRKHCNIDVGEVAARELIRIEPMNPGNYVLLSNTLAWSQQWDAVGDVRQL 499
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+R + K G S +EV + V EF+ GD + P +I +LELL
Sbjct: 500 MRGNGIDKNTGFSWVEVESVVHEFLMGDFSHPSFDEICGILELL 543
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 258/472 (54%), Gaps = 44/472 (9%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI GG L+ A LF + +VF + AM+ Y N + A + +M
Sbjct: 241 MISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM-------- 292
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
P+K + ++ NA++ Y + ++ A
Sbjct: 293 ---PEK---------------------------------NEVSYNAMIAGYVQTKKMDIA 316
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
++FE M R+I +WN +I+GY ++G + +AR FD MP VSW A+I+GY G Y
Sbjct: 317 RELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYE 376
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL++F +++ G + + L CA + +LELG+ IH K + NAL+
Sbjct: 377 EALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALL 436
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
MY KCG I++A+ F+ + E+DVVSW+T++ G A HG +A+ +F M+ V P++I
Sbjct: 437 AMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEI 496
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +G+LSAC+HTG + G YF SM +D+ + +HY C++DLLGRAGRL++A ++I
Sbjct: 497 TMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRN 556
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MP +P A WG+LL + R + N E+ A E + +EP+++G YVLLSN+YA GRW D
Sbjct: 557 MPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDA 616
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
+MR +R ++K PG S +EV N++ F GD + P + I+ LE L L
Sbjct: 617 DKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDL 668
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 166/354 (46%), Gaps = 26/354 (7%)
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
HV + S++ NA++ Y + + A +F++M +RD+ +WN +++GY R ++
Sbjct: 70 HVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGD 129
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
AR LFD MP +VSW +++SGY G EA +VF M E + IS +L A
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYVH 185
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
G +E E ++ K+ + N L+ +++ + A LFD+M RD +SW+T+
Sbjct: 186 NGRIE--EACLLFESKSDW--DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTM 241
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
I G A G +A LF E P D+ T+ ++S G +E +FD M +
Sbjct: 242 ISGYAQGGGLSQARRLFDE-----SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN 296
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
+ Y ++ + ++D A + E MP + + W ++++ Y + A
Sbjct: 297 EVS-----YNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTMITG---YGQIGDIAQA 347
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS---MKKTPGCSL 491
+ ++ D ++ + YA+ G +E+ M I+ + T GC+L
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCAL 401
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 49/248 (19%)
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D DI+ WN IS + R G A +F+ MP + VS+ AMISGY + A ++F Q
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M P+ +L W N ++ Y++
Sbjct: 106 M------PER----------------DLFSW-----------------NVMLTGYVRNCR 126
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ A +LFD M E+DVVSW++++ G A +G +A +F M N I++ GLL+A
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE----KNSISWNGLLAA 182
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
H G E + F+S + + + CL+ R +L A + ++MP++ DA
Sbjct: 183 YVHNGRIEEACLLFESKS-----DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAI 236
Query: 420 IWGSLLSS 427
W +++S
Sbjct: 237 SWNTMISG 244
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 113/531 (21%), Positives = 212/531 (39%), Gaps = 90/531 (16%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L +C ++ L K+IH Q +K F+ ++ + G + A+ F+ ++
Sbjct: 397 FGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIE 456
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E +V +N M+ Y + A+ +++ M +T + PD+ T+ V+ +C+
Sbjct: 457 EKDVVSWNTMLAGYARHGFGRQALTVFESM----KTAG-VKPDEITMVGVLSACSHTGLL 511
Query: 134 SLGKQIHAHVCK-FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA-WNNL-- 189
G + + K +G+ S ++DL G+ L EA + M + A W L
Sbjct: 512 DRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLG 571
Query: 190 ---ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
I G LG+ K A M+F P + + + + + Y G + +A + +M+ +G++
Sbjct: 572 ASRIHGNTELGE-KAAEMVFKMEPQNSGM-YVLLSNLYAASGRWVDADKMRSKMRDIGVQ 629
Query: 247 PDEISIVSVLPACAQLGSLELG-------EWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
++ S + ++ + +G E I+ Y ++ L R +L ++ +
Sbjct: 630 --KVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVE 687
Query: 300 INQASQLFDQMVERDVVSWS--TVIGG--------LANHGKAHKAI-------------- 335
+ + E+ V++ T+ GG L H AI
Sbjct: 688 EEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILR 747
Query: 336 --HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
H FH D L +TG + G YF M ++ + +HY C++
Sbjct: 748 DSHRFHHFNEGFCSCGDYWLQFFLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMI 807
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
DLLGR RL++ G+LL + R + N E+ A + + P+++G
Sbjct: 808 DLLGRVDRLEE-----------------GALLGASRIHGNTELGEKAAQMFFKMGPQNSG 850
Query: 454 NYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSG 504
+S+MR + ++K PG S EV N++ F G
Sbjct: 851 -----------------ISKMRDV----GVQKVPGYSWFEVQNKIHTFSVG 880
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 269/454 (59%), Gaps = 6/454 (1%)
Query: 31 KKIHTQILKY-LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+ IH LK + +S + ++ + L A +F ++ E +V + ++ Y
Sbjct: 162 EAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYAR 221
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
GLA ++ R G + P+ TL + + + + G +H +V + G+
Sbjct: 222 A---GLADEAWRLFCRMVVVGGM-RPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVA 277
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+NAL+D++GKC + A +VF+ M +D+ +W ++++ YA+ G ++ A LF M
Sbjct: 278 RSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDM 337
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P +VSW+ MI+ Y+ + EA+ +FR+M G++P + ++VSVL ACAQLG L+LG
Sbjct: 338 PRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGR 397
Query: 270 WIHM-YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
WI+ Y N + + NALI+M+ KCG + +AS+LFD+M ER+VVSW+T+I A H
Sbjct: 398 WIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVH 457
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G++ +AI LF +++ + P+ ITF+GLL++C+H+G +EG YF M+ + IE ++EH
Sbjct: 458 GQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEH 517
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
Y C++DLLG+ G L++A + MPM+ D WG+LL++CR + N+EI + L+ L+
Sbjct: 518 YACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELD 577
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
P D+G YVL+S IYA +W+ V +R +R +
Sbjct: 578 PSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRG 611
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 201/467 (43%), Gaps = 79/467 (16%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPN 76
+L+SC + L ++H + L+ + F + C A++L + PN
Sbjct: 41 LLESCASFRRLLQLHALLTVTGLAGNGFPAFGFLAFCALSTPPRLAHAAAILARASPGPN 100
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP-DKFTLPFVIKSCAGLL---- 131
++ M+R + L A+ L+++++RD LP D T F +K+ A
Sbjct: 101 AYMLGTMMRGFLRARLPARALGLFRRVVRDR------LPADARTFVFAVKAAAAAAESEH 154
Query: 132 --CPSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
PS G+ IH K G S+ NAL+ Y L +A KVF+EM +RD+V+W
Sbjct: 155 GGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTT 214
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L+ GYAR G +A LF +M ++ G G+ P+
Sbjct: 215 LVDGYARAGLADEAWRLFCRM----------VVVG--------------------GMRPN 244
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN------- 301
+++V+ + A Q+G L G +H Y + + R + NAL++M+ KCGC+
Sbjct: 245 AVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFD 304
Query: 302 ------------------------QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
A QLF M R+VVSWS +I + + +A+ L
Sbjct: 305 GMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWL 364
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F EM V P D T + +LSACA G + G +++ + I + L+D+
Sbjct: 365 FREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFA 424
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ G + +A + +EM + + W +++ + + E A+ E L
Sbjct: 425 KCGDVGEASKLFDEMAER-NVVSWNTMIMAHAVHGQSEEAIRLFEQL 470
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 290/540 (53%), Gaps = 55/540 (10%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+P S + L + K+IH+ ++ F+ +ID G + A +F ++ +V
Sbjct: 266 LPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDV 325
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLR-----DPRTGSLIL------------------ 114
+NAM+ YT + +G A L+K M + D T S ++
Sbjct: 326 VSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQ 385
Query: 115 -------PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDE 167
P+ T+ ++ +CA L S G + HA+ K LL L
Sbjct: 386 MILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLK----------KCLLSL------ 429
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT--TIVSWTAMISGYT 225
+ + D+V N LI Y++ K AR +F+ +P +V+WT MI GY
Sbjct: 430 ---DNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYA 486
Query: 226 HIGSYAEALDVFRQM--QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRR 283
G +AL +F +M + + P+ +I +L ACA L SL +G+ IH Y ++H
Sbjct: 487 QYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYES 546
Query: 284 TV--ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
+V + N LI+MY KCG ++ A +FD M +R+ VSW++++ G HG+ +A+ +F +M
Sbjct: 547 SVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKM 606
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGR 401
Q+ P+DI+F+ LL AC+H+G ++GL YFD M+ D+ + +HY C++DLL R+GR
Sbjct: 607 QKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGR 666
Query: 402 LDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNI 461
LD+A I+EMPM+P A IW +LLS+CR +SN+E+A A+ L+ ++ E+ G+Y L+SNI
Sbjct: 667 LDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNI 726
Query: 462 YAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
YA RW+DV+R+R+L++ +KK PGCS ++ F GD + P +I+ LLE L
Sbjct: 727 YATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERL 786
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 212/411 (51%), Gaps = 31/411 (7%)
Query: 44 QSN-FLVTKMIDVCNSGGDLAYASLLFKQVKEP---NVFLYNAMIRAYTNNHLYGLAINL 99
+SN F+ ++ + + G L ASL+F ++ +V +N+++ A+ A++L
Sbjct: 181 ESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDL 240
Query: 100 YKQM---LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +M + + T D ++ ++ +CA L K+IH++ + G + + N
Sbjct: 241 FSEMTTIVHEKATNER--SDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCN 298
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI-- 214
AL+D Y KC + +A VF M +D+V+WN +++GY + G+ A LF M I
Sbjct: 299 ALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPL 358
Query: 215 --VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
++W+A+I+GY G EALD F+QM + G EP+ ++I+S+L ACA LG+L G H
Sbjct: 359 DVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETH 418
Query: 273 MYCDKNHLLR------------RTVICNALIEMYIKCGCINQASQLFDQMV--ERDVVSW 318
Y K LL V+ NALI+MY KC A +F+ + ER+VV+W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTW 478
Query: 319 STVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+ +IGG A +G ++ A+ LF EM + V PN T +L ACAH G +
Sbjct: 479 TVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYV 538
Query: 377 KRDHHIEHKIEHYG-CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
R H E + CL+D+ + G +D A N+ + MP + + W S++S
Sbjct: 539 TRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVS-WTSMMS 588
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 194/411 (47%), Gaps = 69/411 (16%)
Query: 2 AARIGA--LSIKELE--------DRFVPILQSCENLIELKKIHTQILKY--------LLS 43
A RIG LS+ E F +L+ C ++ +++IH +I+ Y LLS
Sbjct: 9 AKRIGVQFLSVASAECTGRDVSPTHFASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLS 68
Query: 44 QS-------NFLVTKMIDV--------CNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
S +++ K + C + D S+L + V P V+ +N ++RA+
Sbjct: 69 VSLPPLPSHSYVSPKSLGTGVVASYLACGATSDAL--SVLERVVPSPAVW-WNLLVRAHI 125
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
AI + +MLR + PD FTLP+ +K+C L G H +C G
Sbjct: 126 EEGRLDRAIGVSCRMLR-----AGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGF 180
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDR---DIVAWNNLISGYARLGQMKKARML 205
+S+ NAL+ +Y + L +A VF+E+T + D+++WN++++ + + + A L
Sbjct: 181 ESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDL 240
Query: 206 FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL 265
F +M TTIV H + E D+ ISIV++LPACA L +L
Sbjct: 241 FSEM--TTIV----------HEKATNERSDI-------------ISIVNILPACASLKAL 275
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
+ IH Y +N +CNALI+ Y KCG + A +F+ M +DVVSW+ ++ G
Sbjct: 276 PQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGY 335
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
GK A LF M++ +P + IT+ +++ A G+ E L F M
Sbjct: 336 TQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQM 386
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 23/255 (9%)
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
+++ Y G A + +++ + V W ++ + G A+ V +M G +
Sbjct: 87 TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTK 146
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD ++ L AC +L S G H N +CNAL+ MY + G + AS +
Sbjct: 147 PDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLV 206
Query: 307 FDQMVER---DVVSWSTVIGGLANHGKAHKAIHLFHEMQRL--KVPPND----ITFIGLL 357
FD++ + DV+SW++++ A+ LF EM + + N+ I+ + +L
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNIL 266
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHK----IEHYGC--LVDLLGRAGRLDQALNIIEE 411
ACA L K H + + + C L+D + G + A+N+
Sbjct: 267 PACA-------SLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNV 319
Query: 412 MPMKPDAKIWGSLLS 426
M K D W ++++
Sbjct: 320 MEFK-DVVSWNAMVT 333
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 292/535 (54%), Gaps = 48/535 (8%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDV---CNS----------------------------GG 60
+H+ ++K LS FL ++ID+ CNS G
Sbjct: 32 SLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPIRNIHSWNTILASYSRAG 91
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+ A +F ++ PN+ YN +I ++T++ LY ++N+++QM +D L+ D+ TL
Sbjct: 92 FFSQARKVFDEMPHPNIVSYNTLISSFTHHGLYVESMNIFRQMQQD---FDLLALDEITL 148
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
+ +CA L +Q+H GL+ + I NA++D YGKC + ++ +F M +
Sbjct: 149 VSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIFSRMKE 208
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
RD+V W +++ Y + ++ A +F MP + +WTA+I+ EALD+F+QM
Sbjct: 209 RDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTWTALINALVKNKYSNEALDLFQQM 268
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT--------VICNALIE 292
P+ + V VL ACA L + G+ IH ++RR+ +CNALI+
Sbjct: 269 LEEKTSPNAFTFVGVLSACADLALIAKGKEIH-----GLIIRRSSELNFPNVYVCNALID 323
Query: 293 MYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
+Y K G + A LF+ ++E+DVVSW+++I G A +G +A+ F +M + + PN +T
Sbjct: 324 LYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRPNKVT 383
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
F+ +LSAC+HTG +EGL + M++ + IE +EHY ++D+ GR RL +AL++I
Sbjct: 384 FLAVLSACSHTGLSSEGLCILELMEKFYDIEPSLEHYAVMIDMFGRENRLAEALDLISRA 443
Query: 413 PM-KPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
P IWG++L +CR + NL++A+ A E L +EP++ G YV+LSN++A RW D
Sbjct: 444 PNGSKHVGIWGAVLGACRIHENLDLAIRAAETLFEMEPDNAGRYVMLSNVFAAASRWMDA 503
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQD 526
+RKL+ + KK S IE+ N +FV+ D++ + +I+ L+ +L H +
Sbjct: 504 HNVRKLMEERGFKKEVAYSCIEIRNIRHKFVARDNSHSQMGEIYELMFILLEHMN 558
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 169/327 (51%), Gaps = 36/327 (11%)
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
+G +H+H+ K L N L+D+Y KC+ + A K F+++ R+I +WN +++ Y+
Sbjct: 29 VGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPIRNIHSWNTILASYS 88
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG--IEPDEISI 252
R G +AR +FD+MP+ IVS+ +IS +TH G Y E++++FRQMQ + DEI++
Sbjct: 89 RAGFFSQARKVFDEMPHPNIVSYNTLISSFTHHGLYVESMNIFRQMQQDFDLLALDEITL 148
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
VS+ CA LG+LE +H L ++CNA+++ Y KCG + + +F +M E
Sbjct: 149 VSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIFSRMKE 208
Query: 313 RDVVSWST-------------------------------VIGGLANHGKAHKAIHLFHEM 341
RDVV+W++ +I L + +++A+ LF +M
Sbjct: 209 RDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTWTALINALVKNKYSNEALDLFQQM 268
Query: 342 QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC--LVDLLGRA 399
K PN TF+G+LSACA +G + R + Y C L+DL ++
Sbjct: 269 LEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVYVCNALIDLYSKS 328
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLS 426
G + A ++ + ++ D W SL++
Sbjct: 329 GDVKSA-RMLFNLILEKDVVSWNSLIT 354
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
+ C Q L +G +H + K L + N LI+MY KC + A + FD + R+
Sbjct: 17 LFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPIRN 76
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+ SW+T++ + G +A +F EM PN +++ L+S+ H G + E + F
Sbjct: 77 IHSWNTILASYSRAGFFSQARKVFDEMPH----PNIVSYNTLISSFTHHGLYVESMNIFR 132
Query: 375 SMKRD 379
M++D
Sbjct: 133 QMQQD 137
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 299/558 (53%), Gaps = 79/558 (14%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
C L + + ++ L+ F ++ ++ ++ DL Y LLF ++ P +FL+
Sbjct: 15 FHKCGTFDHLNQTTSILITSGLAHHTFFLSDLLR--SATKDLGYTLLLFDRLATPYIFLW 72
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N ++R+++ + + + Y ++ ++PD+ T P ++K+ + L + Q +
Sbjct: 73 NTIVRSFSASSQPQMVLVAYSRLRNHG-----VIPDRHTFPLLLKAFSKLRNEN-PFQFY 126
Query: 141 AHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMK 200
AH+ KFGL + +N+L+ + C + + ++F E +D+V+W LI+G R G+
Sbjct: 127 AHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAV 186
Query: 201 KARMLFDKMPYT-------TIVS-----------W----------------------TAM 220
+A F +M + T+VS W +A+
Sbjct: 187 EALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSAL 246
Query: 221 ISGYTHIGSYAEALDVFRQM-----------------------------QMV--GIEPDE 249
+ Y+ G +A+ VF +M +M+ GIEP++
Sbjct: 247 VDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQ 306
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++ S L ACAQLGSL+ G W+H Y D++ L + + AL++MY KCGC+++A +F++
Sbjct: 307 STVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEK 366
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
+ +DV W+ +I GLA G A +++LF +M R +V PN +TF+G+LSACAH G +EG
Sbjct: 367 LPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEG 426
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
L F M D+ +E ++HYGC+VDLLGRAGRL++A+ IE MPM+P +WG+L S C
Sbjct: 427 LELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCM 486
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ E+ HL+ L+P +G Y+LL+N+Y++ +WE + +R+L++ K + K+P C
Sbjct: 487 IHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPAC 546
Query: 490 SLIEVNNEVQEFVSGDDT 507
S IEVN + EF++ D +
Sbjct: 547 SWIEVNGVIHEFIAFDKS 564
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 251/411 (61%), Gaps = 3/411 (0%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAH 172
I PD T PF+ K+ + LL LG IH HV K G + N+L+ +YG C +++ A
Sbjct: 6 IYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGDIVYAR 65
Query: 173 KVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAE 232
KVF+ +++V+WN+++ GYA+ G + AR LFD MP + SW+ +I GY G+Y +
Sbjct: 66 KVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGD 125
Query: 233 ALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIE 292
A+ VF +M+ G + +E+++VSVL ACA LG+L+ G +H Y N V+ +LI+
Sbjct: 126 AMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLID 185
Query: 293 MYIKCGCINQASQLFDQMVER--DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND 350
MY KCG + +A +F + R DV+ W+ +IGGLA HG +++ L+ EMQ + P++
Sbjct: 186 MYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAGIKPDE 245
Query: 351 ITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE 410
ITF+ LLSACAH G + F+ + ++ + K EHY C+VD++ RAG++ +A +
Sbjct: 246 ITFLCLLSACAHGGLVKQASYVFEGLGKN-GMTPKTEHYACMVDVMARAGQVAEAYQFLC 304
Query: 411 EMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
+MP++P A + G+LLS C + L++A + + L+ L+PE G YV LSN+YA RW++
Sbjct: 305 QMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYAIGRRWDE 364
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
MR+ + + +KKTPG S +E++ F++ D + P + I+ +L +
Sbjct: 365 ARIMREAMERRGVKKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSFI 415
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 164/375 (43%), Gaps = 61/375 (16%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
IH ++K F+ +I + S GD+ YA +F N+ +N+M+ Y
Sbjct: 32 IHGHVIKSGFEIDRFVANSLIHMYGSCGDIVYARKVFDGTPVKNLVSWNSMVDGYAKCGY 91
Query: 93 YGLAINLYKQML-RDPRTGSLIL-------------------------PDKFTLPFVIKS 126
LA L+ M RD R+ S ++ ++ T+ V+ +
Sbjct: 92 LDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDAMAVFEKMRTSGPKANEVTMVSVLCA 151
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR--DIV 184
CA L G+ +H ++ G + + + +L+D+Y KC + EA VF ++ R D++
Sbjct: 152 CAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDMYAKCGAVEEAFAVFRGVSLRKSDVL 211
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
WN +I G A G +K E+LD++ +MQ+ G
Sbjct: 212 IWNAMIGGLATHGLVK-------------------------------ESLDLYTEMQIAG 240
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
I+PDEI+ + +L ACA G ++ ++ KN + +T ++++ + G + +A
Sbjct: 241 IKPDEITFLCLLSACAHGGLVKQASYVFEGLGKNGMTPKTEHYACMVDVMARAGQVAEAY 300
Query: 305 QLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
Q QM +E ++ G NHGK A + ++ L P +D ++GL + A
Sbjct: 301 QFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELD-PEHDGRYVGLSNVYAIG 359
Query: 364 GFWNEGLMYFDSMKR 378
W+E + ++M+R
Sbjct: 360 RRWDEARIMREAMER 374
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 43/250 (17%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM------ 293
M VGI PD ++ + A ++L ELG IH + K+ + N+LI M
Sbjct: 1 MLQVGIYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGD 60
Query: 294 -------------------------YIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
Y KCG ++ A LFD M ERDV SWS +I G A
Sbjct: 61 IVYARKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKS 120
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G A+ +F +M+ N++T + +L ACAH G ++G M + D+ E +
Sbjct: 121 GNYGDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLV-DNGFELNLVL 179
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPM-KPDAKIWGSLLSSCRT----------YSNLEIA 437
L+D+ + G +++A + + + K D IW +++ T Y+ ++IA
Sbjct: 180 RTSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIA 239
Query: 438 VIAMEHLLVL 447
I + + L
Sbjct: 240 GIKPDEITFL 249
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 255/429 (59%), Gaps = 8/429 (1%)
Query: 113 ILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEA 171
PD+ TL V+ +CAGL G+Q+HAH+ K L+ + NAL+D+Y KC EA
Sbjct: 6 FFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEA 65
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
+F+ M R +V+ ++++GYA+ ++ A+++F +M +++W +I+ Y G
Sbjct: 66 RCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEE 125
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL------RRTV 285
EA+ +F Q++ I P + +VL AC + L+LG+ H++ K
Sbjct: 126 EAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVF 185
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
+ N+L++MY+K G I+ +++F++M RD VSW+ +I G A +G+A A+HLF M
Sbjct: 186 VGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSN 245
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
P+ +T IG+LSAC H+G +EG +F M DH I +HY C+VDLLGRAG L +A
Sbjct: 246 ENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEA 305
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
+I++MP +PD+ +W SLL +CR + N+E+ L L+PE++G YVLLSN+YA+
Sbjct: 306 EELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEM 365
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQ 525
G+W DV R+R+ ++ + + K PGCS IE+ +++ F++ D+ P +I L ++ +
Sbjct: 366 GKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 425
Query: 526 DRAK-DVID 533
R D ID
Sbjct: 426 CRTSIDGID 434
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 150/351 (42%), Gaps = 49/351 (13%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
I + S+S T ++ ++ A ++F Q+ E NV +N +I AY N A
Sbjct: 68 IFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEA 127
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCK------FGLKS 150
I L+ Q+ RD I P +T V+ +C + LG+Q H HV K FG +S
Sbjct: 128 IRLFVQLKRDS-----IWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPES 182
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
N+L+D+Y K + + KVFE M RD V+WN +I GYA+ G+ K
Sbjct: 183 DVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAK---------- 232
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+AL +F +M PD ++++ VL AC G ++ G
Sbjct: 233 ---------------------DALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRR 271
Query: 271 IHMYCDKNHLL---RRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLA 326
+ ++H + R C ++++ + G + +A +L M E D V W++++G
Sbjct: 272 HFHFMTEDHGITPSRDHYTC--MVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACR 329
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
H + L P N ++ L + A G W + SMK
Sbjct: 330 LHKNVELGERTAGRLFELD-PENSGPYVLLSNMYAEMGKWADVFRVRRSMK 379
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 50/229 (21%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT-VICNALIEMYIKCG 298
M G PDE+++ SV+ ACA L + G +H + K LR V+ NAL++MY KCG
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 299 ------CI-------------------------NQASQLFDQMVERDVVSWSTVIGGLAN 327
CI A +F QMVE++V++W+ +I A
Sbjct: 61 RTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQ 120
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC-----------AHTGFWNEGLMYFDSM 376
+G+ +AI LF +++R + P T+ +L+AC AH EG +
Sbjct: 121 NGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRF---- 176
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
D E + LVD+ + G +D + E M + D W +++
Sbjct: 177 --DFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR-DNVSWNAMI 222
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 20 ILQSCENLIELK---KIHTQILK------YLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
+L +C N+ L+ + H +LK + F+ ++D+ G + + +F+
Sbjct: 149 VLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 208
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + +NAMI Y N A++L+++ML PD T+ V+ +C
Sbjct: 209 RMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNEN-----PDSVTMIGVLSACGHS 263
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITEN-----ALLDLYGKCDELIEAHKVFEEM-TDRDIV 184
G++ H H F + H IT + ++DL G+ L EA ++ ++M T+ D V
Sbjct: 264 GLVDEGRR-HFH---FMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSV 319
Query: 185 AWNNLISG-----YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
W +L+ LG+ R LF+ P + + + + Y +G +A+ V R
Sbjct: 320 LWASLLGACRLHKNVELGERTAGR-LFELDPENS-GPYVLLSNMYAEMGKWADVFRVRRS 377
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC--DKNHLLRRTV 285
M+ G VS P C+ +E+G ++++ D H R +
Sbjct: 378 MKDRG--------VSKQPGCSW---IEIGSKMNVFLARDNRHPCRNEI 414
>gi|297846398|ref|XP_002891080.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336922|gb|EFH67339.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 172/528 (32%), Positives = 296/528 (56%), Gaps = 38/528 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
++Q+C ++K++ + L QS+FL +++++ C + GDL++A +F+ + +P
Sbjct: 9 MIQNCVTFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVKIFRHIPKPLT 68
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+NA+IR + + LA + Y+ ML+ + +L D T F +K+CA LC S
Sbjct: 69 NDWNAIIRGFAGSSHPSLAFSWYRSMLQRSSSSALCRVDALTCSFTLKACARALCSSAMV 128
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIH + + G + ++ LLD Y K +LI A K
Sbjct: 129 QIHCQISRRGFSADALLCTTLLDAYSKNGDLISALK------------------------ 164
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
LFD+M + SW A+I+G +EAL+++++M+M GI E+++V+ L
Sbjct: 165 -------LFDEMSVRDVASWNALIAGLVAGNRASEALELYKRMEMEGIRRSEVTVVAALG 217
Query: 258 ACAQLGSLELGEWI-HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERDV 315
AC+ LG ++ GE I H Y L ++ NA+I+MY KCG +++A Q+F+Q ++ V
Sbjct: 218 ACSHLGDVKEGEKILHGYIKDEKLDHNVIVSNAVIDMYSKCGFVDKAFQVFEQFTGKKSV 277
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
V+W+T+I G + HG+AH+A+ +F +++ + P+D++++ L+AC HTG G+ F++
Sbjct: 278 VTWNTMITGFSVHGEAHRALEIFEKLEHNGIKPDDVSYLAALTACRHTGLVEYGISIFNN 337
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M + +E ++HYGC+VDLL RAGRL +A +II M M PD +W SLL + ++N+E
Sbjct: 338 MACNG-VEPNMKHYGCVVDLLSRAGRLREAHDIICSMSMVPDPVLWQSLLGASEIHNNVE 396
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A IA + + + G++VLLSN+YA GRW+DV +R + SK +KK PG S IE
Sbjct: 397 MAEIASRKIKEMGVNNDGDFVLLSNVYAAQGRWKDVGLVRDDMESKQVKKVPGISYIEAK 456
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLE--LLALHQDRAKDVIDIMYEDIGE 541
+ +F + D + ++I+ ++ + +D ++ DIGE
Sbjct: 457 GTIHQFHNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGE 504
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 179/505 (35%), Positives = 280/505 (55%), Gaps = 41/505 (8%)
Query: 21 LQSCENL---IELKKIHTQILKYLLSQSNFLVTKMI-DVCNSGGDLAYASLLFKQVKEPN 76
L +C ++ +E +++H +K + S SN V I D+ LA AS LF ++ +
Sbjct: 390 LNACASIRGDLEGRQVHGLAVKSI-SMSNICVANAILDMYGKCKALAEASDLFDMMERRD 448
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+NA+I A N + + M+ S + PD FT V+K+CAG + G
Sbjct: 449 AVSWNAIIAACEQNGNEEETLAHFASMIH-----SRMEPDDFTYGSVLKACAGRQALNTG 503
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+IH + K G+ S AL+D+Y KC + +A K+ + + +V+WN +ISG++ L
Sbjct: 504 MEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLL 563
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
Q + A F +M ++M G+ PD + +VL
Sbjct: 564 QQSEDAHKFFSRM------------------------------LEM-GVNPDNFTYAAVL 592
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
CA L ++ LG+ IH K L IC+ L++MY KCG + + +F++ RD V
Sbjct: 593 DTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFV 652
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
+W+ ++ G A+HG +A+ LF MQ + V PN TF+ +L ACAH G ++GL YFD M
Sbjct: 653 TWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVM 712
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
++ ++ + EHY C+VD+LGR+GR+D+ALN++++MP + DA IW +LLS C+ + N+E+
Sbjct: 713 LSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEV 772
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A A LL L+P+D+ VLLSNIYA G W +VS MRK++R +KK PGCS IE+ +
Sbjct: 773 AEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKD 832
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELL 521
EV F+ GD P ++I+ L +L
Sbjct: 833 EVHAFLVGDKGHPRDEEIYEKLGVL 857
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 159/333 (47%), Gaps = 23/333 (6%)
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLP--------FVIKSCAGLLCPSLGKQIHAHVCKFG 147
AI L+K++ P L T P + + C+ + GKQ HA + G
Sbjct: 20 AIPLFKKIPPIPTNNFSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCG 79
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
+ + N L+ +Y KC L A KVF++M RD+V++N++ISGYA G+M AR F
Sbjct: 80 FEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFY 139
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
+MP +VSW ++ISG+ G +++DVF +M G+ D S+ VL AC L ++
Sbjct: 140 EMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDM 199
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
G +H K V +AL+ MY KC ++ + +F ++ E++ VSWS +I G
Sbjct: 200 GVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQ 259
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
+ + + + LF EMQ + V + + L +CA G ++ H
Sbjct: 260 NDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLG--------KELHSHALKS 311
Query: 388 HYG-------CLVDLLGRAGRLDQALNIIEEMP 413
+G +D+ + GR+ A ++ MP
Sbjct: 312 AFGSDIIVGTATLDMYAKCGRMADAQKVLSSMP 344
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 182/412 (44%), Gaps = 41/412 (9%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ + +SC L L K++H+ LK + T +D+ G +A A + +
Sbjct: 285 YASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMP 344
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ ++ YNA+I Y + A+ ++ +L+ TG + D+ TL + +CA +
Sbjct: 345 KCSLQSYNAIIVGYARSDRGFQALKSFQLLLK---TG--LGFDEITLSGALNACASIRGD 399
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+H K S+ NA+LD+YGKC L EA
Sbjct: 400 LEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASD-------------------- 439
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
LFD M VSW A+I+ G+ E L F M +EPD+ +
Sbjct: 440 -----------LFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYG 488
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL ACA +L G IH K+ + + + AL++MY KCG I +A ++ D+ ++
Sbjct: 489 SVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQK 548
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+VSW+ +I G + ++ A F M + V P++ T+ +L CA+ G
Sbjct: 549 TMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIH 608
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ + ++ + LVD+ + G + + + E+ P + D W ++L
Sbjct: 609 AQIIK-QELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNR-DFVTWNAML 658
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 158/370 (42%), Gaps = 60/370 (16%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F ++ E N ++AMI N + L+K+M G + + + +SC
Sbjct: 238 VFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEM-----QGVGVGVSQSIYASLFRSC 292
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
A L LGK++H+H K S I A LD+Y KC
Sbjct: 293 AALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKC---------------------- 330
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
G+M A+ + MP ++ S+ A+I GY +AL F+ + G+
Sbjct: 331 ---------GRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGF 381
Query: 248 DEISIVSVLPACAQL-GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
DEI++ L ACA + G LE G +H K+ + + NA+++MY KC + +AS L
Sbjct: 382 DEITLSGALNACASIRGDLE-GRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDL 440
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
FD M RD VSW+ +I +G + + F M ++ P+D T+ +L ACA
Sbjct: 441 FDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQAL 500
Query: 367 NEGL----------MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
N G+ M FDS LVD+ + G +++A I + K
Sbjct: 501 NTGMEIHTRIIKSGMGFDSFVG-----------AALVDMYCKCGMIEKADKIHDRTEQKT 549
Query: 417 DAKIWGSLLS 426
W +++S
Sbjct: 550 MVS-WNAIIS 558
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 184/396 (46%), Gaps = 40/396 (10%)
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
S G++ A F ++ E +V +N++I + N +I+++ +M R G + D+
Sbjct: 127 SCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEM---GRCG--VGFDR 181
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
+L V+K+C L +G Q+H V KFG
Sbjct: 182 ASLAVVLKACGALEECDMGVQVHGLVVKFGF----------------------------- 212
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
D D+V + L+ YA+ ++ + +F ++P VSW+AMI+G E L++F
Sbjct: 213 --DCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELF 270
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
++MQ VG+ + S+ +CA L +L LG+ +H + K+ ++ A ++MY KC
Sbjct: 271 KEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKC 330
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G + A ++ M + + S++ +I G A + +A+ F + + + ++IT G L
Sbjct: 331 GRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGAL 390
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
+ACA EG + + + I ++D+ G+ L +A ++ + M + D
Sbjct: 391 NACASIRGDLEGRQVHGLAVKSISMSN-ICVANAILDMYGKCKALAEASDLFDMMERR-D 448
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLL--VLEPED 451
A W +++++C N E + ++ +EP+D
Sbjct: 449 AVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDD 484
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 162/357 (45%), Gaps = 44/357 (12%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L++C L +IHT+I+K + +F+ ++D+ G + A + + +
Sbjct: 487 YGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTE 546
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ + +NA+I ++ A + +ML + PD FT V+ +CA L
Sbjct: 547 QKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMG-----VNPDNFTYAAVLDTCANLATV 601
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LGKQIHA + K L+S + L+D+Y KC + ++ +FE+ +RD V WN ++ GY
Sbjct: 602 GLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGY 661
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A H G EAL +F MQ+V ++P+ + V
Sbjct: 662 A-------------------------------HHGLGEEALKLFESMQLVNVKPNHATFV 690
Query: 254 SVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-V 311
SVL ACA +G ++ G + + + L ++ + ++++ + G I++A L +M
Sbjct: 691 SVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPF 750
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC-AHTGFWN 367
E D V W ++ HG A + L++ P D + LLS A G W
Sbjct: 751 EADAVIWRNLLSVCKIHGNVEVAEKATRAL--LQLDPQDSSACVLLSNIYADAGMWG 805
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 258/472 (54%), Gaps = 44/472 (9%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI GG L+ A LF + +VF + AM+ Y N + A + +M
Sbjct: 241 MISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM-------- 292
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
P+K + ++ NA++ Y + ++ A
Sbjct: 293 ---PEK---------------------------------NEVSYNAMIAGYVQTKKMDIA 316
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
++FE M R+I +WN +I+GY ++G + +AR FD MP VSW A+I+GY G Y
Sbjct: 317 RELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYE 376
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL++F +++ G + + L CA + +LELG+ IH K + NAL+
Sbjct: 377 EALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALL 436
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
MY KCG I++A+ F+ + E+DVVSW+T++ G A HG +A+ +F M+ V P++I
Sbjct: 437 AMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEI 496
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +G+LSAC+HTG + G YF SM +D+ + +HY C++DLLGRAGRL++A ++I
Sbjct: 497 TMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRN 556
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MP +P A WG+LL + R + N E+ A E + +EP+++G YVLLSN+YA GRW D
Sbjct: 557 MPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDA 616
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
+MR +R ++K PG S +EV N++ F GD + P + I+ LE L L
Sbjct: 617 DKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDL 668
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 166/354 (46%), Gaps = 26/354 (7%)
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
HV + S++ NA++ Y + + A +F++M +RD+ +WN +++GY R ++
Sbjct: 70 HVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGD 129
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
AR LFD MP +VSW +++SGY G EA +VF M E + IS +L A
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYVH 185
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
G +E E ++ K+ + N L+ +++ + A LFD+M RD +SW+T+
Sbjct: 186 NGRIE--EACLLFESKSDW--DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTM 241
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
I G A G +A LF E P D+ T+ ++S G +E +FD M +
Sbjct: 242 ISGYAQGGGLSQARRLFDE-----SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN 296
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
+ Y ++ + ++D A + E MP + + W ++++ Y + A
Sbjct: 297 EVS-----YNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTMITG---YGQIGDIAQA 347
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS---MKKTPGCSL 491
+ ++ D ++ + YA+ G +E+ M I+ + T GC+L
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCAL 401
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 49/248 (19%)
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D DI+ WN IS + R G A +F+ MP + VS+ AMISGY + A ++F Q
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M P+ +L W N ++ Y++
Sbjct: 106 M------PER----------------DLFSW-----------------NVMLTGYVRNCR 126
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ A +LFD M E+DVVSW++++ G A +G +A +F M N I++ GLL+A
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE----KNSISWNGLLAA 182
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
H G E + F+S + + + CL+ R +L A + ++MP++ DA
Sbjct: 183 YVHNGRIEEACLLFESKS-----DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAI 236
Query: 420 IWGSLLSS 427
W +++S
Sbjct: 237 SWNTMISG 244
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 282/500 (56%), Gaps = 41/500 (8%)
Query: 20 ILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
IL C + E +++HT ++K S +L T++I + N L A +F ++ + N
Sbjct: 68 ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRN 127
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V + AMI AY+ A+NL+ +MLR S P+ FT ++ SC G L G
Sbjct: 128 VVSWTAMISAYSQRGFAFEALNLFVEMLR-----SDTEPNHFTFATILTSCYGSLGFETG 182
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+QIH+ K +SH ++LLD+Y K + +AH V
Sbjct: 183 RQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGV---------------------- 220
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
F +P +V+ TA+ISGY +G EAL +FRQ+Q+ G+ + ++ SVL
Sbjct: 221 ---------FHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVL 271
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
A + L +L G+ +H + ++ V+ N+LI+MY KCG + A ++FD M ER +
Sbjct: 272 TALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCI 331
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGL-MYFD 374
SW+ ++ G + HG A + + LF M + KV P+ IT++ +LS C+H + GL ++++
Sbjct: 332 SWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYN 391
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+ IE I HYGC+VDLLGRAGR+++A + I++MP P A IWGSLL SCR +S++
Sbjct: 392 MVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDV 451
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
EI +I + LL LEPE+ GNYV+LSN+YA G+WED+ +R L++ K++ K PG S +E+
Sbjct: 452 EIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVEL 511
Query: 495 NNEVQEFVSGDDTKPFLKDI 514
+ V F + D T P +++
Sbjct: 512 DQIVHTFHASDHTHPRREEV 531
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
QM ++G E S+L C ++ G+ +H + K L + LI +Y KC
Sbjct: 52 QMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCD 111
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
C+ A +FD+M +R+VVSW+ +I + G A +A++LF EM R PN TF +L+
Sbjct: 112 CLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILT 171
Query: 359 AC-AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+C GF ++ ++KR++ E + L+D+ ++GR+ A + +P +
Sbjct: 172 SCYGSLGFETGRQIHSIAIKRNY--ESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER 227
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 269/492 (54%), Gaps = 35/492 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+P + L + K IH ++ + L T ++D+ L YA +F V + N
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND 276
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++AMI Y + A+ LY ML + P TL ++++CA L GK
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDML----CIYGLNPTPATLATMLRACAQLTDLKRGK 332
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
++H H+ K G+ D D N+LIS YA+ G
Sbjct: 333 KLHCHMIKSGM-------------------------------DLDTTVGNSLISMYAKCG 361
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
M A D+M VS++A+ISG G +AL +FRQMQ GI P +++++LP
Sbjct: 362 IMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLP 421
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
AC+ L +L+ G H Y T ICNA+I+MY KCG I + ++FD+M RD++S
Sbjct: 422 ACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIIS 481
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+T+I G HG +A+ LF E+Q L + P+D+T I +LSAC+H+G EG +F SM
Sbjct: 482 WNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMS 541
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
++ +I+ ++ HY C+VDLL RAG LD+A I+ MP P+ +IWG+LL++CRT+ N+E+
Sbjct: 542 QNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMG 601
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
+ + +L PE TGN+VL+SNIY+ GRW+D + +R + R KK+PGCS +E++
Sbjct: 602 EQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGV 661
Query: 498 VQEFVSGDDTKP 509
+ F+ G + P
Sbjct: 662 IHVFIGGHQSHP 673
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 200/432 (46%), Gaps = 55/432 (12%)
Query: 8 LSIKELEDRFVPILQSCENLIELKKIHTQILKY-------LLSQSNFLVTKMIDVCNSGG 60
+ I+ L+ V IL LI ++ H QI + +S S+ T++ S
Sbjct: 1 MRIRCLKREVVSIL-----LINWRQRHRQIRSFSPHPHPHRVSDSDAAATQLARYHISRN 55
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
++ A +F Q+ +P+V L+N MIR Y + + +I LY ML+ T P FT
Sbjct: 56 EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVT-----PTNFTF 110
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
PF++K+C+ L LG+ IH H GL ALL +Y KC
Sbjct: 111 PFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKC--------------- 155
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTT--IVSWTAMISGYTHIGSYAEALDVFR 238
G + +A+ LF+ + + IV+W AMI+ ++ +A+ +
Sbjct: 156 ----------------GHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVA 199
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
QMQ G+ P+ ++VS+LP Q +L G+ IH Y +N V+ AL++MY KC
Sbjct: 200 QMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCH 259
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPNDITFIGLL 357
+ A ++F+ + +++ V WS +IGG H A+ L+ +M + + P T +L
Sbjct: 260 LLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATML 319
Query: 358 SACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
ACA G ++ +K ++ + + L+ + + G +D A+ ++EM K
Sbjct: 320 RACAQLTDLKRGKKLHCHMIKSGMDLDTTVGN--SLISMYAKCGIMDNAVGFLDEMIAK- 376
Query: 417 DAKIWGSLLSSC 428
D + +++S C
Sbjct: 377 DTVSYSAIISGC 388
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 192/428 (44%), Gaps = 52/428 (12%)
Query: 8 LSIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
L + F +L++C +L L + IHT LS ++ T ++ + G L
Sbjct: 101 LGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQ 160
Query: 65 ASLLFKQV--KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPF 122
A LF + ++ ++ +NAMI A++ + L+ I+ QM + T P+ TL
Sbjct: 161 AQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVT-----PNSSTLVS 215
Query: 123 VIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
++ + GK IHA+ + + + + ALLD+Y KC L A K+F + ++
Sbjct: 216 ILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKN 275
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
V W+ +I GY + A L+D M + +
Sbjct: 276 DVCWSAMIGGYVLHDSISDALALYDDM------------------------------LCI 305
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
G+ P ++ ++L ACAQL L+ G+ +H + K+ + T + N+LI MY KCG ++
Sbjct: 306 YGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDN 365
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
A D+M+ +D VS+S +I G +G A KA+ +F +MQ + P T I LL AC+H
Sbjct: 366 AVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSH 425
Query: 363 T-----GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
G G D I + I +D+ + G++ + I + M + D
Sbjct: 426 LAALQHGTCCHGYTVVRGFTNDTSICNAI------IDMYSKCGKITISREIFDRMQNR-D 478
Query: 418 AKIWGSLL 425
W +++
Sbjct: 479 IISWNTMI 486
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 149/326 (45%), Gaps = 11/326 (3%)
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
++D D A L + +++ AR +FD++P ++V W MI Y G + +++
Sbjct: 35 HRVSDSDAAA-TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIY 93
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
++ M +G+ P + +L AC+ L +L+LG IH + L + AL+ MY
Sbjct: 94 LYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYA 153
Query: 296 KCGCINQASQLFDQMV--ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITF 353
KCG + QA LF+ + +RD+V+W+ +I + H + IH +MQ+ V PN T
Sbjct: 154 KCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTL 213
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
+ +L ++G R+ ++ + L+D+ + L A I +
Sbjct: 214 VSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTA-LLDMYAKCHLLFYARKIFNTVN 272
Query: 414 MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSR 473
K D W +++ + ++ A+ + +L + + L + + A + D+ R
Sbjct: 273 KKNDV-CWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRAC-AQLTDLKR 330
Query: 474 MRKL----IRSK-SMKKTPGCSLIEV 494
+KL I+S + T G SLI +
Sbjct: 331 GKKLHCHMIKSGMDLDTTVGNSLISM 356
>gi|357469567|ref|XP_003605068.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506123|gb|AES87265.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 494
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 264/422 (62%), Gaps = 7/422 (1%)
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
++ L+N +IR+Y+ + ++ + L + T SL L D FTL F+ +CA L
Sbjct: 75 SLLLFNNLIRSYSLSLFPHESLKFFTHTLNN-LTHSLSL-DSFTLTFLAHACANLDTTHF 132
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G +H VCK G ++H + LL +Y L++A +VF EM DR+ V WN ISG +
Sbjct: 133 GFHLHCIVCKMGFENHVFVQTGLLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIK 192
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIVS 254
GQ++ AR +FD+M ++VSWT +I GYT + +AL +FR+M ++ GIEP+E+++++
Sbjct: 193 WGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLT 252
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVE- 312
V PA A LG++++ E +H Y +K + I NALI++Y KCGCI AS LF +M +
Sbjct: 253 VFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDW 312
Query: 313 -RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
R+ VSW++V+ G A G +A+ F +M++ V PN + F+ +LSAC+H+G EGL
Sbjct: 313 RRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLE 372
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK-PDAKIWGSLLSSCRT 430
+F M D+ + I+HYGC++D+LGRAGRL +A + E+P + + IW +LL +C
Sbjct: 373 FFGKMVNDYGLVPDIKHYGCVIDMLGRAGRLGEAEKVALEVPHEAANDVIWRTLLGACSV 432
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ N+EI + +L +E G+YVL+SNI+A GR++DV R+R++I +++ K PG S
Sbjct: 433 HDNVEIGKRVTKKILEMEKGHGGDYVLMSNIFASVGRFKDVERLREMIDKRNVFKLPGYS 492
Query: 491 LI 492
++
Sbjct: 493 IV 494
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 186/516 (36%), Positives = 281/516 (54%), Gaps = 47/516 (9%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+P + + L K +H ++ + T ++D+ L YA +F + N
Sbjct: 217 LPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNE 276
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
++AMI Y + A+ L+ QM L+D P TL V+++CA L S G
Sbjct: 277 VSWSAMIGGYVXSDCMKEALELFDQMILKDAMD-----PTPVTLGSVLRACAKLTDLSRG 331
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+++H ++ K G DI+ N L+S YA+
Sbjct: 332 RKLHCYIIKLGXV-------------------------------LDILLGNTLLSMYAKC 360
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A FD M VS++A++SG G+ A AL +FR MQ+ GI+PD +++ VL
Sbjct: 361 GVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL 420
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRR-----TVICNALIEMYIKCGCINQASQLFDQMV 311
PAC+ L +L+ H +C +L+ R T+ICNALI+MY KCG I+ A ++F++M
Sbjct: 421 PACSHLAALQ-----HGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD 475
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
D+VSW+ +I G HG +A+ LFH++ L + P+DITFI LLS+C+H+G EG +
Sbjct: 476 RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRL 535
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
+FD+M RD I ++EH C+VD+LGRAG +D+A + I MP +PD +IW +LLS+CR +
Sbjct: 536 WFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 595
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSL 491
N+E+ + + L PE TGN+VLLSNIY+ GRW+D + +R + +KK PGCS
Sbjct: 596 KNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSW 655
Query: 492 IEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
IE+N V FV GD + L I LE L + R
Sbjct: 656 IEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKR 691
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 222/456 (48%), Gaps = 62/456 (13%)
Query: 12 ELEDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
E+++ ++ +L++C ++L E KKIH LK + + ++ K+ + S + A L
Sbjct: 6 EVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRL 65
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F ++ P+V L+N +IRAY N + AI+LY ML + P+K+T PFV+K+C+
Sbjct: 66 FDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLG-----VRPNKYTYPFVLKACS 120
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
GLL G +IH+H FGL+S AL+D Y KC L+EA ++F M+ RD+VAWN
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWN- 179
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
AMI+G + G +A+ + QMQ GI P+
Sbjct: 180 ------------------------------AMIAGCSLYGLCDDAVQLIMQMQEEGICPN 209
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+IV VLP + +L G+ +H YC + V+ L++MY KC C+ A ++FD
Sbjct: 210 SSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFD 269
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWN 367
M R+ VSWS +IGG +A+ LF +M + + P +T +L ACA
Sbjct: 270 VMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAK----- 324
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLL---------GRAGRLDQALNIIEEMPMKPDA 418
+ R + I G ++D+L + G +D A+ + M K D+
Sbjct: 325 -----LTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPK-DS 378
Query: 419 KIWGSLLSSCRTYSNLEIA--VIAMEHLLVLEPEDT 452
+ +++S C N +A + M L ++P+ T
Sbjct: 379 VSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLT 414
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 149/324 (45%), Gaps = 7/324 (2%)
Query: 158 LLDLYGKCDELIEAHKV----FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTT 213
LL+ + L EA K+ + ++ D + L Y Q+ AR LFD++P +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 214 IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHM 273
++ W +I Y G + A+D++ M +G+ P++ + VL AC+ L ++E G IH
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 274 YCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
+ L +C AL++ Y KCG + +A +LF M RDVV+W+ +I G + +G
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 334 AIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLV 393
A+ L +MQ + PN T +G+L G R + G L+
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG-LL 252
Query: 394 DLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTG 453
D+ + L A I + M ++ + W +++ ++ A+ + +++ + D
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVS-WSAMIGGYVXSDCMKEALELFDQMILKDAMDP- 310
Query: 454 NYVLLSNIYAKHGRWEDVSRMRKL 477
V L ++ + D+SR RKL
Sbjct: 311 TPVTLGSVLRACAKLTDLSRGRKL 334
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 265/445 (59%), Gaps = 9/445 (2%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E N+ +N ++ + + + A+ +++++ PD+ T+ V+ S
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG-----FCPDQVTVSSVLPSVGDSEML 268
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
++G+ IH +V K GL +A++D+YGK + +F + + N I+G
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 194 ARLGQMKKARMLFDKMPYTT----IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+R G + KA +F+ T +VSWT++I+G G EAL++FR+MQ+ G++P+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++I S+LPAC + +L G H + + HLL + +ALI+MY KCG IN + +F+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M +++V W++++ G + HGKA + + +F + R ++ P+ I+F LLSAC G +EG
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF M ++ I+ ++EHY C+V+LLGRAG+L +A ++I+EMP +PD+ +WG+LL+SCR
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+N+++A IA E L LEPE+ G YVLLSNIYA G W +V +R + S +KK PGC
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDI 514
S I+V N V ++GD + P + I
Sbjct: 629 SWIQVKNRVYTLLAGDKSHPQIDQI 653
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 229/470 (48%), Gaps = 50/470 (10%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
+ H +ILK ++ K+I ++ A L+ + + +P ++ ++++I A T
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
L+ +I ++ +M ++PD LP + K CA L +GKQIH C GL
Sbjct: 96 LFTQSIGVFSRMFSHG-----LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
+ + ++ +Y +C + +A KVF+ M+D+D+V + L+ YAR G +++ + +M
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 212 T----TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
+ IVSW ++SG+ G + EA+ +F+++ +G PD++++ SVLP+ L +
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKC------------------------------ 297
G IH Y K LL+ + +A+I+MY K
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 298 -GCINQASQLF----DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
G +++A ++F +Q +E +VVSW+++I G A +GK +A+ LF EMQ V PN +T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-CLVDLLGRAGRLDQALNIIEE 411
+L AC + G R H +++ H G L+D+ + GR++ + +
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIVFNM 448
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL--VLEPEDTGNYVLLS 459
MP K + W SL++ + + + E L+ L+P+ LLS
Sbjct: 449 MPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 278/494 (56%), Gaps = 16/494 (3%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
V +L+ C ++ E+K+IH + + L++ F+ +K++ + DL YA LF + PN+
Sbjct: 8 VGLLEQCSSMREMKQIHGHAITHGLARFAFISSKLLAFY-ARSDLRYAHTLFSHIPFPNL 66
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F YN +I A++ H L + QML + + P+ T F +
Sbjct: 67 FDYNTIITAFSP-HYSSL---FFIQMLN-----AAVSPNSRT--FSLLLSKSSPSLPFLH 115
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
Q+H+H+ + G S +LL Y A ++F++ +++ W +L++GY G
Sbjct: 116 QLHSHIIRRGHVSDFYVITSLLAAYSNHGSTRAARRLFDQSPYKNVACWTSLVTGYCNNG 175
Query: 198 QMKKARMLFDKMPYT--TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
+ AR LFD +P VS++AM+SGY G + E + +FR+++ ++P+ + SV
Sbjct: 176 LVNDARNLFDAIPERERNDVSYSAMVSGYVKNGCFREGIQLFRELKDRNVKPNNSLLASV 235
Query: 256 LPACAQLGSLELGEWIHMYCDKN--HLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
L ACA +G+ E G+WIH Y D+N + ALI+ Y KCGC+ A ++F M +
Sbjct: 236 LSACASVGAFEEGKWIHAYVDQNKSQCYYELELGTALIDFYTKCGCVEPAQRVFGNMKTK 295
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV +WS ++ GLA + K +A+ LF EM+++ PN +TFIG+L+AC H + E L F
Sbjct: 296 DVAAWSAMVLGLAINAKNQEALELFEEMEKVGPRPNAVTFIGVLTACNHKDLFGEALKLF 355
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M + I IEHYGC+VD+L R+G++++AL I+ M ++PD IWGSLL+ C ++N
Sbjct: 356 GYMSDKYGIVASIEHYGCVVDVLARSGKIEEALEFIKSMEVEPDGVIWGSLLNGCFLHNN 415
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+ ++L+ LEP G YVLLSN+YA G+WE V RK ++ + + G S IE
Sbjct: 416 IELGHKVGKYLVELEPGHGGRYVLLSNVYATMGKWEAVLETRKFMKDRGVPAVSGSSFIE 475
Query: 494 VNNEVQEFVSGDDT 507
++ V +F+ D+
Sbjct: 476 IHQTVHKFLVHDNN 489
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 293/538 (54%), Gaps = 47/538 (8%)
Query: 15 DRFV--PILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDV---CNSGGDLAYAS 66
DRF ++ +C N+ L +++H+Q +++ L+ + +I++ C+ G + A
Sbjct: 270 DRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAAR 329
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F Q+ + NVF + AMI Y Y A++L++ M+ + ++P+ FT +K
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL-----THVIPNHFTFSSTLK 384
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA L +G+Q+ H K G S + N+L
Sbjct: 385 ACANLAALRIGEQVFTHAVKLGFSSVNCVANSL--------------------------- 417
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
IS YAR G++ AR FD + ++S+ +I Y + EAL++F +++ G+
Sbjct: 418 ----ISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGM 473
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+ S+L A +G++ GE IH K+ L +CNALI MY +CG I A Q
Sbjct: 474 GASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQ 533
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+F+ M +R+V+SW+++I G A HG A +A+ LFH+M V PN++T+I +LSAC+H G
Sbjct: 534 VFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGL 593
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
NEG +F SM +H + ++EHY C+VD+LGR+G L +A+ I MP K DA +W + L
Sbjct: 594 VNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFL 653
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+CR + NLE+ A + ++ EP D Y+LLSN+YA +W++VS +RK ++ K + K
Sbjct: 654 GACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIK 713
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV--IDIMYEDIGE 541
GCS +EV N+V +F GD + P +I+ L+ L++ + V +D + D+ E
Sbjct: 714 EAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEE 771
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 181/378 (47%), Gaps = 39/378 (10%)
Query: 52 MIDVCNSG-GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTG 110
+ID+ G GDL A +F+++ E N + MI G AI+L+ M+
Sbjct: 210 LIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIF----- 264
Query: 111 SLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIE 170
S PD+FTL VI +CA + LG+Q+H+ + GL L+++Y KC
Sbjct: 265 SGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCS---- 320
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
D G M AR +FD++ + SWTAMI+GY G Y
Sbjct: 321 --------VD----------------GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGY 356
Query: 231 -AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
EALD+FR M + + P+ + S L ACA L +L +GE + + K + N+
Sbjct: 357 DEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANS 416
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI MY + G I+ A + FD + E++++S++TVI A + + +A+ LF+E++ + +
Sbjct: 417 LISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGAS 476
Query: 350 DITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
TF LLS A G +G ++ +K + + L+ + R G ++ A +
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV--CNALISMYSRCGNIESAFQV 534
Query: 409 IEEMPMKPDAKIWGSLLS 426
E+M + + W S+++
Sbjct: 535 FEDMEDR-NVISWTSIIT 551
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 192/459 (41%), Gaps = 81/459 (17%)
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
L F PN L +I+ N L+ AI+ + M+ PD T +K
Sbjct: 23 LQFPTFTNPNP-LTGRLIQEINNGRLHK-AISTLEHMVHQGSH-----PDLQTYSLFLKK 75
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVA 185
C +G +H + + L+ S+T N+L+ LY KC + +A +F M + RD+++
Sbjct: 76 CIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLIS 135
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W+ ++S +A + M + ++++ MI G
Sbjct: 136 WSAMVSCFAN-----------NNMGFRALLTFVDMIEN--------------------GY 164
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN-ALIEMYIKC-GCINQA 303
P+E + AC+ + +G+ I + K L+ V LI+M++K G + A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-- 361
++F++M ER+ V+W+ +I L G A +AI LF +M P+ T G++SACA
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM 284
Query: 362 ---------HTGFWNEGL------------MYFD--------SMKR--DHHIEHKIEHYG 390
H+ GL MY + ++ D ++H + +
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344
Query: 391 CLVD-LLGRAGRLDQALNIIEEMPMK---PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
++ + + G ++AL++ M + P+ + S L +C + L I H +
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK 404
Query: 447 LEPEDTGNYVL--LSNIYAKHGRWEDVSRMRKLIRSKSM 483
L N V L ++YA+ GR +D + ++ K++
Sbjct: 405 LGFSSV-NCVANSLISMYARSGRIDDARKAFDILFEKNL 442
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 270/493 (54%), Gaps = 45/493 (9%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+K +H + K F+ +ID GD+ A +F ++E +V +N+M+
Sbjct: 143 VKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVK 202
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
N A+ ++ +M R
Sbjct: 203 NGDLDGALKVFDEMPERDR----------------------------------------- 221
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
++ N +LD + K E+ +A K+FE M +RDIV+W+ ++ GY++ G M ARMLFD+
Sbjct: 222 ---VSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRC 278
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P +V WT +ISGY G EA+++ +M+ G+ D+ +S+L ACA+ G L LG+
Sbjct: 279 PVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGK 338
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANH 328
+H ++ T + N+ I+MY KCGC++ A ++F+ M E+D+VSW+++I G H
Sbjct: 339 KMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIH 398
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G K+I LF+ M R P+ TFIGLL AC H G NEG YF SM+R + I +IEH
Sbjct: 399 GHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEH 458
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
YGC+VDLLGR G L +A ++ MP +P+A I G+LL +CR ++++++A ++L L
Sbjct: 459 YGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLV 518
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
P D GN+ LLSNIYA+ G W +V+++RK + + +K G S IEV EV EF D +
Sbjct: 519 PSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSH 578
Query: 509 PFLKDIFWLLELL 521
P DI+ +++ L
Sbjct: 579 PKSGDIYNMIDRL 591
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 196/406 (48%), Gaps = 43/406 (10%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
L C N +K+IH Q++K L Q ++ K+I + +L+ A +F QV +PNV LY
Sbjct: 29 LHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLY 88
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC-PSLGKQI 139
N +IRAY+ + ++ + +L+ G +L D FT PF++K C G SL K +
Sbjct: 89 NYLIRAYSLSGNESNSLCAFGVLLKMHVDG--VLADNFTYPFLLKGCNGSSSWLSLVKMV 146
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
HAHV K G N+L+D Y +C ++ A KVF M +RD+V+WN+++ G + G +
Sbjct: 147 HAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDL 206
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
A +FD+MP VSW M+ G+T G +A +F +M E IVS
Sbjct: 207 DGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMA-------ERDIVS----- 254
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
W M C Y K G ++ A LFD+ +++V W+
Sbjct: 255 ----------WSTMVCG-----------------YSKNGDMDMARMLFDRCPVKNLVLWT 287
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
T+I G A G+ +A++L EM++ + +D FI +L+ACA +G G DS R
Sbjct: 288 TIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRS 347
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ +D+ + G +D A + M + D W S++
Sbjct: 348 -RFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMI 392
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 180/518 (34%), Positives = 275/518 (53%), Gaps = 59/518 (11%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT-- 88
++I+ QILK+ F+ + ++D+ G + A F ++ E NV + N MI
Sbjct: 158 RQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRC 217
Query: 89 -----NNHLY----------------GLAINLYKQ----MLRDPRTGSLILPDKFTLPFV 123
+ L+ GL N ++ M R+ R + D+FT V
Sbjct: 218 GMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAM-DQFTFGSV 276
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+ +C LL GKQIHA+V + K + +AL+D+Y KC +
Sbjct: 277 LTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSI--------------- 321
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
K A +F +MP ++SWTAM+ GY G EA+ +F +MQ
Sbjct: 322 ----------------KSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRN 365
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G+EPD+ ++ SV+ +CA L SLE G H + L+ + NALI +Y KCG +
Sbjct: 366 GVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENS 425
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+LF +M RD VSW+ ++ G A GKA++ I LF M + P+ +TFIG+LSAC+
Sbjct: 426 HRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRA 485
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G +GL YF+SM ++H I ++H C++DLLGRAGRL++A N I MP PD W +
Sbjct: 486 GLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWAT 545
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LLSSCR + ++EI A + L+ LEP++ +YVLLS++YA G+W+ V+++R+ +R K +
Sbjct: 546 LLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRV 605
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+K PG S I+ +V F + D + PFL I+ LE L
Sbjct: 606 RKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKL 643
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 230/470 (48%), Gaps = 42/470 (8%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L+ C +N + KK+H ILK + FL +I G+LAYA +F +
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 74 EPNVFLYNAMIRAYTNNHL----------------------------YGL---AINLYKQ 102
+PN+F +N ++ Y+ L YG A+ +YK
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
ML+D + + ++ T ++ C+ C LG+QI+ + KFG S + L+D+Y
Sbjct: 128 MLKD----AAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMY 183
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
K + +A + F+EM +R++V N +I+G R G +++++ LF + +SWT MI+
Sbjct: 184 TKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMIT 243
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
G G EALD+FR+M++ G D+ + SVL AC L +L G+ IH Y +
Sbjct: 244 GLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKD 303
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
+ +AL++MY KC I A +F +M +++V+SW+ ++ G +G + +A+ +F EMQ
Sbjct: 304 NVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQ 363
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
R V P+D T ++S+CA+ EG + I I L+ L G+ G
Sbjct: 364 RNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISF-ITVSNALITLYGKCGST 422
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPE 450
+ + + EM ++ D W +LL+ + + E +L L+P+
Sbjct: 423 ENSHRLFTEMNIR-DEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPD 471
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 264/492 (53%), Gaps = 54/492 (10%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG---GDLAYASLLFKQVK 73
+ ++ C L ELK+I +K + ++TK I+ C S + +A LF Q+
Sbjct: 29 LISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQIT 88
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+PN+ L+N M R Y + I +++ LR L +K+ A
Sbjct: 89 QPNIVLFNTMARGYARLNDPLRMITHFRRCLR--------------LVSKVKALAE---- 130
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GKQ+H K G+ + L+++Y C
Sbjct: 131 --GKQLHCFAVKLGVSDNMYVVPTLINMYTAC---------------------------- 160
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G + +R +FDK+ +V++ A+I EAL +FR++Q +G++P +++++
Sbjct: 161 ---GDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTML 217
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
VL +CA LGSL+LG W+H Y K R + LI+MY KCG ++ A +F M +R
Sbjct: 218 VVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKR 277
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +WS +I A HG +AI + +EM++ KV P++ITF+G+L AC+H G EG YF
Sbjct: 278 DTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYF 337
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M ++ I I+HYGC+VDLLGRAGRLD+A I+E+P+KP +W +LLS+C T+ N
Sbjct: 338 HGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGN 397
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+ +E + L+ G+YV+ SN+ A++G+W+DV+ +RK + K K PGCS IE
Sbjct: 398 VEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIE 457
Query: 494 VNNEVQEFVSGD 505
VNN V EF +G+
Sbjct: 458 VNNVVHEFFAGE 469
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 166/355 (46%), Gaps = 39/355 (10%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
R + ++ + L E K++H +K +S + ++V +I++ + GD+ + +F ++ EP
Sbjct: 117 RCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEP 176
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
V YNA+I + N+ A+ L++++ G + P T+ V+ SCA L L
Sbjct: 177 CVVAYNAIIMSLARNNRANEALALFREL---QEIG--LKPTDVTMLVVLSSCALLGSLDL 231
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+ +H +V K+G + L+D+Y KC L +A VF +M RD AW+ +I YA
Sbjct: 232 GRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYA- 290
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
TH G +A+ + +M+ ++PDEI+ + +
Sbjct: 291 -----------------------------TH-GDGFQAISMLNEMKKEKVQPDEITFLGI 320
Query: 256 LPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VER 313
L AC+ G +E G E+ H ++ ++ ++++ + G +++A + D++ ++
Sbjct: 321 LYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKP 380
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ W T++ + HG + + L + ++ + CA G W++
Sbjct: 381 TPILWRTLLSACSTHGNVEMGKRVIERIFELD-DSHGGDYVIFSNLCARYGKWDD 434
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 285/508 (56%), Gaps = 38/508 (7%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
E +++H ++K +L T++I + N L A + ++ E NV + AMI Y+
Sbjct: 28 EGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYS 87
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
A++L+ +ML S P++FT V+ SC LG+QIH+ V K
Sbjct: 88 QRGYASEALHLFVEMLM-----SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSF 142
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+SH ++LLD+Y A+ G++ +AR +FD
Sbjct: 143 ESHIFVGSSLLDMY-------------------------------AKAGKICEARRVFDG 171
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+P +VS TA+ISGY +G EALD+FR++Q G+ + ++ SVL A + L +L+ G
Sbjct: 172 LPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHG 231
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+H + + L V+ N+LI+MY KCG + + ++FD M ER V+SW+ ++ G + H
Sbjct: 232 RQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKH 291
Query: 329 GKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGL-MYFDSMKRDHHIEHKI 386
G +A+ LF M + KV P+ +TF+ +LS C+H G + GL ++++ + + E +I
Sbjct: 292 GLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEI 351
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
EHYGC+VDL GRAGR+++A I++MP +P A IWGSLL +CR + N+ I LL
Sbjct: 352 EHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLE 411
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
+E E+ GNYV+LSN+YA GRW+DV +R+L++ K++ K PG S IE++ + F + D
Sbjct: 412 IESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDR 471
Query: 507 TKPFLKDIFWLLELLALHQDRAKDVIDI 534
+ P +++F + L++ A V ++
Sbjct: 472 SHPRKEEVFAKVRELSIKIKEAGYVPEL 499
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M + G+E + SVL C ++ G+ +H + K + LI +Y KC C
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ A ++ D+M ER+VVSW+ +I G + G A +A+HLF EM PN+ TF +L++
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
C + + G S+ E I L+D+ +AG++ +A + + +P +
Sbjct: 121 CTSSSGFQLGRQ-IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 175
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 176/508 (34%), Positives = 277/508 (54%), Gaps = 41/508 (8%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F IL +C + L E ++IH I K+ F+ T ++D+ G + A +F ++
Sbjct: 203 FSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMP 262
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
N+ +N+MI + N LYG AI +++++L + PD+ ++ V+ +CAGL+
Sbjct: 263 HRNLVSWNSMIVGFVKNKLYGRAIGVFREVLS-------LGPDQVSISSVLSACAGLVEL 315
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GKQ+H + K GL +N+L+D+Y KC +A K+F DRD+
Sbjct: 316 DFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDV---------- 365
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
V+W MI G ++ +A F+ M G+EPDE S
Sbjct: 366 ---------------------VTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYS 404
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+ A A + +L G IH + K ++ + I ++L+ MY KCG + A Q+F + E
Sbjct: 405 SLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEH 464
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+VV W+ +I HG A++AI LF EM V P ITF+ +LSAC+HTG ++G YF
Sbjct: 465 NVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYF 524
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM H+I+ +EHY C+VDLLGR GRL++A IE MP +PD+ +WG+LL +C ++N
Sbjct: 525 NSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHAN 584
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+ E L LEP++ GNY+LLSNIY +HG E+ +R+L+ ++K GCS I+
Sbjct: 585 VEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWID 644
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELL 521
V N F + D + ++I+ +L+ L
Sbjct: 645 VKNRTFVFNANDRSHSRTQEIYGMLQKL 672
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 181/389 (46%), Gaps = 41/389 (10%)
Query: 25 ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP--NVFLYNA 82
++L +IH+Q++ S + ++ + G + + LLF P NV +
Sbjct: 111 KSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTT 170
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+I + ++ A+ + +M RT I P+ FT ++ +CA S G+QIHA
Sbjct: 171 LINQLSRSNKPFQALTFFNRM----RTTG-IYPNHFTFSAILPACAHAALLSEGQQIHAL 225
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
+ K + ALLD+Y KC ++ A VF+EM R++V+WN++I G+ +
Sbjct: 226 IHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVK------- 278
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
+K+ Y A+ VFR++ +G PD++SI SVL ACA L
Sbjct: 279 ----NKL--------------------YGRAIGVFREVLSLG--PDQVSISSVLSACAGL 312
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
L+ G+ +H K L+ + N+L++MY KCG A++LF +RDVV+W+ +I
Sbjct: 313 VELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMI 372
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
G +A F M R V P++ ++ L A A +G M + + H+
Sbjct: 373 MGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHV 432
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
++ LV + G+ G + A + E
Sbjct: 433 KNS-RISSSLVTMYGKCGSMLDAYQVFRE 460
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 20/275 (7%)
Query: 187 NNLISGYARLGQMKKARMLFDKMPY--TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
N L+ YA+ G + +LF+ P+ T +V+WT +I+ + +AL F +M+ G
Sbjct: 136 NTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTG 195
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
I P+ + ++LPACA L G+ IH K+ L + AL++MY KCG + A
Sbjct: 196 IYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAE 255
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+FD+M R++VSW+++I G + +AI +F E+ L + P+ ++ +LSACA
Sbjct: 256 NVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREV--LSLGPDQVSISSVLSACA--- 310
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYG------CLVDLLGRAGRLDQALNIIEEMPMKPDA 418
GL+ D K+ H K G LVD+ + G + A + + D
Sbjct: 311 ----GLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDR-DV 365
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLV--LEPED 451
W ++ C N E A + ++ +EP++
Sbjct: 366 VTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDE 400
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 188/517 (36%), Positives = 294/517 (56%), Gaps = 34/517 (6%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL---FKQVKEP-NVFLYNAMI 84
E K++H ++L+ + L+ +++ + GD YA+LL + P + L++ ++
Sbjct: 3 EAKRLHARLLRGGARRLQPLLLRVL----AAGDHRYAALLLASYPSASSPHSAPLHDRLL 58
Query: 85 RAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVC 144
A N+ + L R R L+ P FT F++ S A HA +
Sbjct: 59 HALANSLPR-PSPLLLPTFARAHRL-RLLTPLSFT--FLLSSPAAASHAPFALCSHALLV 114
Query: 145 KFG--LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
K G +AL+ Y K L EA +VF+EM RD +N L+S YAR G + A
Sbjct: 115 KSGHFASGDPFLGSALVSFYAKSRLLDEARRVFDEMPRRDTAVYNALLSAYARCGLVDAA 174
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIVSVLPACAQ 261
LF +M +VSWTAM+SGY G + A++ F +M + G++P+E+++ SVLPACA
Sbjct: 175 EKLFGEMTERNVVSWTAMVSGYAQNGRHEAAVETFLEMWEGAGVQPNELTVSSVLPACAA 234
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERDVVSWST 320
+G++ELG + Y L + NAL+EMY KCG I +A Q+F + RD+ SW+T
Sbjct: 235 VGAMELGTKVEEYARGKGHLGNVFVTNALLEMYAKCGSIQRAWQVFQGIGHRRDLCSWNT 294
Query: 321 VIGGLANHGKAHKAIHLFHEMQ-RLK-----------------VPPNDITFIGLLSACAH 362
+I A HG +A+ LFH+++ R+ V P+ ITF+G++ AC H
Sbjct: 295 MIMAFAVHGLWMEALALFHKLRVRISCSNSLVYFFSIPTHMTGVKPDGITFVGVILACTH 354
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G +EG + F+SM+ D I +IEHYGC+VDLLGRAG L +A ++I MP +PDA IWG
Sbjct: 355 GGLVDEGKLIFNSMEADFSINPRIEHYGCMVDLLGRAGLLKEAYSMIISMPAEPDAVIWG 414
Query: 423 SLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
+LL +C + N+E+A A++ L+ LEP++T N V+LSNIYA G+W+ V+++ KL++ K
Sbjct: 415 ALLGACSFHGNIELAETAVDKLMYLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKD 474
Query: 483 MKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
KK+ G S IE++ + +F+ D + P ++I+ L+
Sbjct: 475 HKKSAGYSFIELDGRMHKFLVEDMSHPIFEEIYKTLD 511
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 266/473 (56%), Gaps = 45/473 (9%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T MI G LA A LF ++ NV + MI Y N +A L++
Sbjct: 175 TNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFE-------- 226
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
++P+K + ++ A+L Y + +
Sbjct: 227 ---VMPEK---------------------------------NEVSWTAMLMGYTQGGRIE 250
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
EA ++F+ M + +VA N +I G+ + G++ KAR +FD++ +W+AMI Y G
Sbjct: 251 EASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGF 310
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
EAL++F MQ G++ + S++SVL CA L SL+ G +H K+ + +
Sbjct: 311 EVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASV 370
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI MY+KCG + +A Q+FD+ +D+V W+++I G A HG +A+ +FHEM + +
Sbjct: 371 LITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATD 430
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF+G+LSAC++TG EGL F+SMK + +E K EHY C+VDLLGRAG ++ A+++I
Sbjct: 431 GVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLI 490
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
++MP++ DA IWG+LL +CRT+ N+ +A +A + LL LEP++ G Y+LLSNIYA GRW
Sbjct: 491 QKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWG 550
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK-PFLKDIFWLLELL 521
DV+ +R+ +R K + K+PGCS IEV V F G TK P L I +LE L
Sbjct: 551 DVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKL 603
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 155/323 (47%), Gaps = 21/323 (6%)
Query: 144 CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKAR 203
C+ S +I N+ + Y + ++ A +VF+EM D+ IV+WN++++GY + + ++AR
Sbjct: 8 CRRYCTSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREAR 67
Query: 204 MLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLG 263
LFDKMP VSW +ISGY +EA F M E + +S +++ Q G
Sbjct: 68 YLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMP----ERNVVSWTAMVRGYVQEG 123
Query: 264 SLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIG 323
+ E + + +++ TV+ LI++ I++A LFD M +DVV+ + +I
Sbjct: 124 LVSEAETLFWQMPEKNVVSWTVMLGGLIQVRR----IDEARGLFDIMPVKDVVARTNMIS 179
Query: 324 GLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIE 383
G G+ +A LF EM R V I++ ++S G + F+ M + +
Sbjct: 180 GYCQEGRLAEARELFDEMPRRNV----ISWTTMISGYVQNGQVDVARKLFEVMPEKNEVS 235
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEH 443
+ ++ + GR+++A + + MP+K +L + N E+A A +
Sbjct: 236 -----WTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQ---NGEVAK-ARQV 286
Query: 444 LLVLEPEDTGNYVLLSNIYAKHG 466
+ +D G + + +Y + G
Sbjct: 287 FDQIREKDDGTWSAMIKVYERKG 309
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 114/272 (41%), Gaps = 36/272 (13%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +L C +L L +++H +++K F+ + +I + GDL A +F +
Sbjct: 333 LISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFS 392
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
++ ++N++I Y + L A+ ++ +M S + D T V+ +C+
Sbjct: 393 PKDIVMWNSIITGYAQHGLVEEALQVFHEM-----CSSGMATDGVTFVGVLSACSYTGKV 447
Query: 134 SLGKQIHAHV-CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLIS 191
G +I + K+ ++ + ++DL G+ + +A + ++M + D + W L+
Sbjct: 448 KEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLG 507
Query: 192 GYARLGQMKKARMLFDKM---------PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
M A + K+ PY + + Y G + + ++ R M+
Sbjct: 508 ACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNI------YASKGRWGDVAELRRNMR- 560
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
+ VS P C+ +E+ + +HM+
Sbjct: 561 -------VKKVSKSPGCSW---IEVEKRVHMF 582
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 177/491 (36%), Positives = 282/491 (57%), Gaps = 19/491 (3%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI+ G + A LF+++ E NV +N +I A+ A L+ +M
Sbjct: 166 MIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRM-------- 217
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
P++ + + AGL K ++ + ++ N ++ Y + L EA
Sbjct: 218 ---PERDVISWTTM-VAGLSKNGRIDDARLLFDKMPVR-NVVSWNTMIIGYAQNMRLDEA 272
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
K+FE+M +R++ +WN +I+G+ + G++++A F KM +V+WTA+ISG+ G
Sbjct: 273 FKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSE 332
Query: 232 EALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
EAL +F +MQ ++P+E + VSVL AC++L +L G+ IH K + +AL
Sbjct: 333 EALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSAL 392
Query: 291 IEMYIKCGCINQASQLFD--QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
I MY KCG + A ++FD + RDVVSW+ +I A+HG HKAI LF EMQ L P
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+++T+I LLSAC+H G +EGL F+++ RD I+ + +H+ CLVDL GRAGRL +A +
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDF 512
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I+ + +KP A +W +LL+ C + ++++ + E LL EPE+ G Y++LSNIYA G+W
Sbjct: 513 IKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKW 572
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
+ + +R ++ K +KK PGCS IEV N V FV GD++ ++I+ LL L +
Sbjct: 573 REAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDL---HTKM 629
Query: 529 KDVIDIMYEDI 539
K + +YED+
Sbjct: 630 KKIGHTLYEDL 640
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 149/292 (51%), Gaps = 23/292 (7%)
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+I + V F S+ N L+ GK ++ EA +VFEEM DRD+V+W +I+GY + G
Sbjct: 52 KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCG 111
Query: 198 QMKKARMLFDKM-PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+++A+ LFD+ +V+WTA++SGY EA +F M + + IS +++
Sbjct: 112 MIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNV----ISWNTMI 167
Query: 257 PACAQLGSLELGEWIHMYCDKNHLL--RRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
A+ G WI D + R V N +I +++ +++A +LF++M ERD
Sbjct: 168 EGYARKG------WIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERD 221
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V+SW+T++ GL+ +G+ A LF +M V + IG A +E F+
Sbjct: 222 VISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGY----AQNMRLDEAFKLFE 277
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
M E ++ + ++ + G+L++A++ +M K + W +++S
Sbjct: 278 QMP-----ERELSSWNTMITGFIQNGKLERAVDFFYKMSNK-NVVTWTAVIS 323
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 148/291 (50%), Gaps = 21/291 (7%)
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
+T AL+ Y + + + EA ++F+ M +++++WN +I GYAR G + +A LF+KMP
Sbjct: 130 VTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPER 189
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
+VSW +I+ + EA ++F +M E D IS +++ ++ G ++
Sbjct: 190 NVVSWNTVITAFMQRRRVDEAQELFNRMP----ERDVISWTTMVAGLSKNGRIDDA---R 242
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ DK +R V N +I Y + +++A +LF+QM ER++ SW+T+I G +GK
Sbjct: 243 LLFDK-MPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLE 301
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+A+ F++M N +T+ ++S G E L F M+ ++++ + G
Sbjct: 302 RAVDFFYKMSN----KNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVK---PNEGTF 354
Query: 393 VDLLGRAGRL------DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
V +LG +L Q II + + A + +L++ LE+A
Sbjct: 355 VSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELA 405
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 48/349 (13%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
L E K+ Q+ + LS N ++T I G L A F ++ NV + A+I
Sbjct: 269 LDEAFKLFEQMPERELSSWNTMITGFI----QNGKLERAVDFFYKMSNKNVVTWTAVISG 324
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
+ + A+ ++ +M + + + P++ T V+ +C+ L G+QIH + K
Sbjct: 325 HVQDGRSEEALKIFSEM----QAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKT 380
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEE--MTDRDIVAWNNLISGYARLGQMKKARM 204
+ + +AL+++Y KC EL A K+F++ + RD+V+WN +I+ YA G KA
Sbjct: 381 VYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAIS 440
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
LFD+M Q +G PD ++ +++L AC+ G
Sbjct: 441 LFDEM-------------------------------QALGFRPDNVTYIALLSACSHAGL 469
Query: 265 LELGEWI--HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTV 321
++ G + ++ D++ LR L++++ + G + +A + V+ W+ +
Sbjct: 470 VDEGLKLFENLVRDRSIKLREDHFT-CLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAAL 528
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKV-PPNDITFIGLLSACAHTGFWNEG 369
+ G HG H + + L+ P N T++ L + A TG W E
Sbjct: 529 LAGCNVHG--HIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREA 575
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 277/483 (57%), Gaps = 5/483 (1%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
++H+QI+K +S+ L ++DV G + A LF ++ + + +++ A+
Sbjct: 24 ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
+ +++ M T + PD F ++++C+ L LGKQ+HA
Sbjct: 84 IPRRTLSMLNTMF----THDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDD 139
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
+ +++L+D+Y KC + +A VF+ + ++ V+W ++ISGYAR G+ +A LF + P
Sbjct: 140 EVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPV 199
Query: 212 TTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLELGEW 270
+ SWTA+ISG G + +F +M+ GI+ D + + SV+ CA L LELG+
Sbjct: 200 RNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQ 259
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
IH I NAL++MY KC I A +F +M +DV+SW+++I G A HGK
Sbjct: 260 IHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGK 319
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
A +A+ L+ EM ++ PN++TF+GLL AC+H G + G F SM D+ I ++HY
Sbjct: 320 AEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYT 379
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
CL+DLL R+G LD+A N+++++P KPD W SLLS+C ++NLE+ V + +L L+PE
Sbjct: 380 CLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPE 439
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
D Y+LLSN+YA W VS++RKL+ S ++K PG S I+ + Q F +G+
Sbjct: 440 DPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHP 499
Query: 511 LKD 513
+K+
Sbjct: 500 MKN 502
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 159/382 (41%), Gaps = 64/382 (16%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F I+++C +L L K++H + + + + +ID+ G A +F +
Sbjct: 108 FACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSIL 167
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQ---------------------------MLRD 106
N + +MI Y + A++L+ Q + +
Sbjct: 168 FKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNE 227
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
R + + D L V+ CA L LGKQIH V G +S NAL+D+Y KC
Sbjct: 228 MRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 287
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+++ A +F M +D+++W ++I G A+ G+ ++A L+D+M + I
Sbjct: 288 DILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRI------------ 335
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
+P+E++ V +L AC+ G + G + ++ + ++
Sbjct: 336 -------------------KPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQ 376
Query: 287 -CNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL 344
L+++ + G +++A L D++ + D +W++++ H + + + L
Sbjct: 377 HYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDL 436
Query: 345 KVPPNDITFIGLLSACAHTGFW 366
K P + T+I L + A W
Sbjct: 437 K-PEDPSTYILLSNVYAGAEMW 457
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 276/509 (54%), Gaps = 36/509 (7%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
K IHTQ +K +S+F++ + + N G Y LF++++ P+V + +I Y
Sbjct: 245 KAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQM 304
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
A+ +K+M + S + P+K+T VI SCA L G+QIH HV + GL +
Sbjct: 305 GEEEHAVEAFKRMRK-----SYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVN 359
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
N+++ LY KC L A VF +T +DI++W+ +IS Y++ G K
Sbjct: 360 ALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAK---------- 409
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
EA D M+ G +P+E ++ SVL C + LE G+
Sbjct: 410 ---------------------EAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQ 448
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
+H + + ++ +A+I MY KCG + +AS++F+ M D++SW+ +I G A HG
Sbjct: 449 VHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGY 508
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+ +AI+LF ++ + + P+ + FIG+L+AC H G + G YF M + I EHYG
Sbjct: 509 SQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYG 568
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
CL+DLL RAGRL +A +II MP D +W +LL +CR + +++ E LL L+P
Sbjct: 569 CLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPN 628
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
G ++ L+NIYA GRW++ + +RKL++SK + K G S + VN+++ FV+GD P
Sbjct: 629 SAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQ 688
Query: 511 LKDIFWLLELLALHQDRAKDVIDIMYEDI 539
+ I +L+LL+ + A+ I ++ED+
Sbjct: 689 SEHITTVLKLLSANIGDAQQEIRSLHEDV 717
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 149/289 (51%), Gaps = 13/289 (4%)
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARL------GQMKKARMLFDKMPYTTIVSW 217
+C ELI+ + +E + + +N++ + L GQ+ KAR +FDKM + +SW
Sbjct: 34 ECRELIQ--QPIQEQPAENAYSVHNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISW 91
Query: 218 TAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
T +I+GY + EAL +F M + G + D+ I L ACA ++ GE +H +
Sbjct: 92 TTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSV 151
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIH 336
K+ L+ + +ALI+MY+K G I Q ++F++M+ R+VVSW+ +I GL + G + +
Sbjct: 152 KSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLL 211
Query: 337 LFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDL 395
F EM R KV + TF L A A + + G ++ ++K+ + L +
Sbjct: 212 YFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFV--INTLATM 269
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ G+ D + + E+M M PD W +L+S+ E AV A + +
Sbjct: 270 YNKCGKPDYVMRLFEKMRM-PDVVSWTTLISTYVQMGEEEHAVEAFKRM 317
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 161/360 (44%), Gaps = 46/360 (12%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F ++ SC NL K +IH +L+ L + + +I + + G L ASL+F +
Sbjct: 329 FAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGIT 388
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD-PRTGSLILPDKFTLPFVIKSCAGLLC 132
++ ++ +I Y+ A + M R+ P+ P++F L V+ C +
Sbjct: 389 RKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPK------PNEFALSSVLSVCGSMAL 442
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
GKQ+HAH+ G+ ++ +A++ +Y KC + EA K+F M DI++W +I+G
Sbjct: 443 LEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMING 502
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA GY+ EA+++F ++ VG++PD +
Sbjct: 503 YAE--------------------------HGYSQ-----EAINLFEKISSVGLKPDYVMF 531
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGCINQASQLFDQM- 310
+ VL AC G ++LG + M + + + LI++ + G +++A + M
Sbjct: 532 IGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMP 591
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEG 369
D V WST++ HG + + Q L++ PN T I L + A G W E
Sbjct: 592 FHTDDVVWSTLLRACRVHGDVDRG--RWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEA 649
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 183/450 (40%), Gaps = 71/450 (15%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L A +F ++ + + +I Y N A+ L+ M P D+F
Sbjct: 71 GQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQR----DQFM 126
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ +K+CA + G+ +H K GL +AL+D+Y K
Sbjct: 127 ISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMK--------------- 171
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+G++++ +F+KM +VSWTA+I+G H G E L F +
Sbjct: 172 ----------------VGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSE 215
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M + D + L A A L G+ IH K + + N L MY KCG
Sbjct: 216 MWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGK 275
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ +LF++M DVVSW+T+I G+ A+ F M++ V PN TF ++S+
Sbjct: 276 PDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISS 335
Query: 360 CAH--TGFWNE---------GLMYFDSMKRD------------------HHIEHK-IEHY 389
CA+ W E GL+ S+ H I K I +
Sbjct: 336 CANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISW 395
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPM---KPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
++ + + G +A + + M KP+ S+LS C + + LE HLL
Sbjct: 396 STIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLC 455
Query: 447 --LEPEDTGNYVLLSNIYAKHGRWEDVSRM 474
++ E + ++S +Y+K G ++ S++
Sbjct: 456 IGIDHEAMVHSAIIS-MYSKCGSVQEASKI 484
>gi|15239985|ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g43790
gi|10177948|dbj|BAB11307.1| unnamed protein product [Arabidopsis thaliana]
gi|332007627|gb|AED95010.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 460
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 176/485 (36%), Positives = 284/485 (58%), Gaps = 44/485 (9%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
R + ++ C++L LK+IH QI+ LS + ++K++ + +S L+YA + +Q+ P
Sbjct: 11 RCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNP 69
Query: 76 NVFLYNAMIRAYTNNH---LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+VFLYN +I + +NH LA +LY Q+L + + P++FT P + K+ +G
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSS--RSNFVRPNEFTYPSLFKA-SGFDA 126
Query: 133 P--SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G+ +HAHV KF E + D L+
Sbjct: 127 QWHRHGRALHAHVLKF-----------------------------LEPVNHDRFVQAALV 157
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH---IGSYAEALDVFRQMQMVGIEP 247
YA G++++AR LF+++ + +W +++ Y + I S E L +F +MQ + P
Sbjct: 158 GFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRP 214
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+E+S+V+++ +CA LG G W H+Y KN+L + +LI++Y KCGC++ A ++F
Sbjct: 215 NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D+M +RDV ++ +I GLA HG + I L+ + + P+ TF+ +SAC+H+G +
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EGL F+SMK + IE K+EHYGCLVDLLGR+GRL++A I++MP+KP+A +W S L S
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
+T+ + E IA++HLL LE E++GNYVLLSNIYA RW DV + R+L++ + K+P
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 488 GCSLI 492
G S +
Sbjct: 455 GISTL 459
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 299/516 (57%), Gaps = 21/516 (4%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L+SC L + ++HT + K + F+V ++ V GD A +F +
Sbjct: 83 FPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACRVFDESP 142
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ YN +I G ++ ++ +M G + PD++T ++ +C+ L
Sbjct: 143 VRDSVSYNTVINGLVRAGRAGCSMRIFAEM-----RGGFVEPDEYTFVALLSACSLLEDR 197
Query: 134 SLGKQIHAHVCK----FGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD-IVAWNN 188
+G+ +H V + FG + + NAL+D+Y KC L A +V + + AW +
Sbjct: 198 GIGRVVHGLVYRKLGCFG--ENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTS 255
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L+S YA G+++ AR LFD+M +VSWTAMISGY H G + EAL++F +++ +G+EPD
Sbjct: 256 LVSAYALRGEVEVARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPD 315
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLL---RRTVICNALIEMYIKCGCINQASQ 305
E+ +V+ L ACA+LG+LELG IH D++ R C A+++MY KCG I A
Sbjct: 316 EVVVVAALSACARLGALELGRRIHHKYDRDSWQCGHNRGFTC-AVVDMYAKCGSIEAALD 374
Query: 306 LFDQMVE--RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+F + + + +++++ GLA+HG+ A+ LF EM+ + + P+++T++ LL AC H+
Sbjct: 375 VFLKTSDDMKTTFLYNSIMSGLAHHGRGEHAMALFEEMRLVGLEPDEVTYVALLCACGHS 434
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G + G F+SM ++ + ++EHYGC+VDLLGRAG L++A +I+ MP K +A IW +
Sbjct: 435 GLVDHGKRLFESMLSEYGVNPQMEHYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVIWRA 494
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LLS+C+ ++E+A +A + LL +E + YV+LSN+ + ++ + +R+ I + +
Sbjct: 495 LLSACKVDGDVELARLASQELLAMENDHGARYVMLSNMLTLMDKHDEAASVRRAIDNVGI 554
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
+K PG S +E+N + +F++GD + P K ++L
Sbjct: 555 QKPPGWSHVEMNGTLHKFLAGDKSHPEAKATEFMLR 590
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 214/455 (47%), Gaps = 80/455 (17%)
Query: 47 FLVTKMID---VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM 103
FL+T +I NS L ++ LLF Q+ P++FL+N +IRA++ + A++LYK+M
Sbjct: 11 FLMTPLISFFAAANSNA-LHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKKM 69
Query: 104 LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
L + I PD FT PF++KSCA L P LG Q+H HV K G +S+ NALL +Y
Sbjct: 70 LS---SSPPIFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYF 126
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
+ A +VF+E RD V++N +I+G R G+
Sbjct: 127 VFGDARNACRVFDESPVRDSVSYNTVINGLVRAGRA------------------------ 162
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH--MYCDKNHLL 281
++ +F +M+ +EPDE + V++L AC+ L +G +H +Y
Sbjct: 163 -------GCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFG 215
Query: 282 RRTVICNALIEMYIKCGC--------------------------------INQASQLFDQ 309
++ NAL++MY KCGC + A +LFDQ
Sbjct: 216 ENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQ 275
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M ERDVVSW+ +I G + G +A+ LF E++ L + P+++ + LSACA G G
Sbjct: 276 MGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLGALELG 335
Query: 370 LMYFDSMKRDH-HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK---IWGSLL 425
RD H +VD+ + G ++ AL++ + D K ++ S++
Sbjct: 336 RRIHHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVF--LKTSDDMKTTFLYNSIM 393
Query: 426 SSCRTYSNLEIAVIAME--HLLVLEPEDTGNYVLL 458
S + E A+ E L+ LEP++ LL
Sbjct: 394 SGLAHHGRGEHAMALFEEMRLVGLEPDEVTYVALL 428
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 176/481 (36%), Positives = 275/481 (57%), Gaps = 28/481 (5%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+L A + F ++ E V +NAM+ Y + + L+ ML PD+ T
Sbjct: 213 NLETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDMLSSGNE-----PDETTW 267
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-T 179
V+ SC+ L P L + I + + +S+ + ALLD++ KC L A K+FE++
Sbjct: 268 VTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGV 327
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
++ V WN +IS YAR+G + AR LF+KMP VSW +MI+GY G +A+ +F++
Sbjct: 328 YKNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKE 387
Query: 240 M-QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
M +PDE+++VSV AC LG L LG W +NH+ N+LI MY++CG
Sbjct: 388 MISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCG 447
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ A F +M +D+VS++T+I GLA HG ++I L +M+ + P+ IT+IG+L+
Sbjct: 448 SMEDARITFQEMATKDLVSYNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLT 507
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H G EG F+S+K ++HY C++D+LGR G+L++A+ +I+ MPM+P A
Sbjct: 508 ACSHAGLLEEGWKVFESIKVP-----DVDHYACMIDMLGRVGKLEEAVKLIQSMPMEPHA 562
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
I+GSLL++ + +E+ +A L +EP ++GNYVLLSNIYA GRW+DV ++R +
Sbjct: 563 GIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKM 622
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLK-DIFWLLELLALHQDRAKDVIDIMYE 537
R + +KKT F+ + +P K DI+ LL L + RA VID ++
Sbjct: 623 RKQGVKKTT-------------FIV--ENRPHEKSDIYNLLAHLKVKLRRAGYVIDKIWM 667
Query: 538 D 538
D
Sbjct: 668 D 668
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 218/479 (45%), Gaps = 87/479 (18%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG-GDLAYASLLFKQVKEPNVF 78
I NL L+++H Q++ + N V ++ C Y S +F+ PNV
Sbjct: 9 IASKITNLHHLRQLHAQLVLHSQHHHNHWVALLLTQCTHLLAPSNYTSHIFRAATYPNVH 68
Query: 79 LYNAMIRAYTN-NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLLCPSL 135
++ M++ Y+ + ++L+K M + + I P P +IKS AG+L
Sbjct: 69 VFTCMLKYYSQIGATTQVVVSLFKHM----QYYNDIKPYTSFYPVLIKSAGKAGML---- 120
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGK--CDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+HA++ K G NA++ +Y K C EL A K+F+EM DR WN +ISGY
Sbjct: 121 ---LHAYLLKLGHSHDHHVRNAIMGIYAKYGCIEL--ARKLFDEMPDRTAADWNVIISGY 175
Query: 194 ---------------------------------ARLGQMKKARMLFDKMPYTTIVSWTAM 220
A++ ++ ARM FD+MP + SW AM
Sbjct: 176 WKCGNEKEATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAM 235
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
+SGY G+ E + +F M G EPDE + V+VL +C+ LG L E I D+ +
Sbjct: 236 LSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNF 295
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQ------------------------------- 309
+ AL++M+ KCG + A ++F+Q
Sbjct: 296 RSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLARDLFN 355
Query: 310 -MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWN 367
M ER+ VSW+++I G A +G++ KAI LF EM K P+++T + + SAC H G
Sbjct: 356 KMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRLG 415
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
G + S+ ++HI+ I Y L+ + R G ++ A +EM K D + +L+S
Sbjct: 416 LG-NWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQEMATK-DLVSYNTLIS 472
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 276/487 (56%), Gaps = 42/487 (8%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
+ + +H + FL+ +I++ G L A LF ++ + NV + MI AY+
Sbjct: 34 QARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYS 93
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
N++L A++ MLR+ + P+ +T V+++C GLL +Q+H + K GL
Sbjct: 94 NSNLNHKALDFLILMLREG-----VRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGL 145
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+S +AL+D Y K LG+ A +F++
Sbjct: 146 ESDVFVRSALIDTYSK-------------------------------LGEQHDALNVFNE 174
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
M +V W ++I G+ E L ++++M+ D+ ++ SVL AC L LELG
Sbjct: 175 MITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELG 234
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERDVVSWSTVIGGLAN 327
+H++ K + ++ NAL++MY KCG + A+ LF +M+ E+DV+SWST+I GLA
Sbjct: 235 RQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQ 292
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
+G + A+ LF M+ PN IT +G+L AC+H G N+G YF SMK I+ E
Sbjct: 293 NGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGRE 352
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
HYGC++DLLGRAG+LD+A+ +I EM +PDA W LL +CR + N+++A+ A + +L L
Sbjct: 353 HYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKL 412
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
+P D G Y+LLSNIYA +WEDV+ +R+ +R++ +KK PGCS IEV+ +V F+ GD++
Sbjct: 413 DPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNS 472
Query: 508 KPFLKDI 514
P +++I
Sbjct: 473 HPRIEEI 479
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 182/359 (50%), Gaps = 50/359 (13%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ +L++C+ L+ L+++H ILK L F+ + +ID + G+ A +F ++ +
Sbjct: 120 YSSVLRACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGD 179
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ ++N++I + N ++LYK+M R + + D+ TL V+++C GL LG
Sbjct: 180 LVVWNSIIGGFAQNSDGDETLHLYKRMKR-----ADFVADQSTLTSVLRACTGLALLELG 234
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE-MTDRDIVAWNNLISGYAR 195
+Q+H HV K+ I NALLD+Y KC L +A+ +F MT++D+++W+ +I+G A+
Sbjct: 235 RQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQ 292
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
+G++ A+AL +F M+ G +P+ I+I+ V
Sbjct: 293 --------------------------NGFS-----ADALKLFEAMKSKGPKPNYITILGV 321
Query: 256 LPACAQLGSLELGEWIHMYCDKNHL----LRRTVICNALIEMYIKCGCINQASQLFDQMV 311
L AC+ G + G W + K H R C +I++ + G +++A +L +M
Sbjct: 322 LFACSHAGLVNDG-WYYFQSMKEHFGIDPGREHYGC--IIDLLGRAGKLDEAVKLIHEMN 378
Query: 312 -ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNE 368
E D V+W ++G H AI+ E+ LK+ P D T+I L + A++ W +
Sbjct: 379 HEPDAVTWRILLGACRVHKNVDLAIYAAKEI--LKLDPADAGTYILLSNIYANSQKWED 435
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 169/489 (34%), Positives = 270/489 (55%), Gaps = 36/489 (7%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
+H +L+ + T ++D+ + G ++ A ++F + V +N+MI Y +
Sbjct: 153 VHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGD 212
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHS 152
A+ ++++ML + + P T+ + +CA L GK +H V + L
Sbjct: 213 AEGAMLIFQKMLDEG-----VQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKL---- 263
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
D D+ N+LIS Y++ ++ A +F +
Sbjct: 264 ---------------------------DSDVSVMNSLISMYSKCKRVDIAADIFKNLRNK 296
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
T+VSW AMI GY G EAL+ F +MQ I+PD ++VSV+PA A+L +WIH
Sbjct: 297 TLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIH 356
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ L + + AL++MY KCG I+ A +LFD M R V++W+ +I G HG
Sbjct: 357 GLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGK 416
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
++ LF EM++ + PNDITF+ LSAC+H+G EGL +F+SMK+D+ IE ++HYG +
Sbjct: 417 TSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAM 476
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VDLLGRAGRL+QA + I++MP+KP ++G++L +C+ + N+++ A + L P+D
Sbjct: 477 VDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDG 536
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLK 512
G +VLL+NIYA W V+++R ++ ++KTPGCSL+E+ NEV F SG + P K
Sbjct: 537 GYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSK 596
Query: 513 DIFWLLELL 521
I+ LE L
Sbjct: 597 KIYSYLETL 605
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 197/418 (47%), Gaps = 50/418 (11%)
Query: 3 ARIGALSIKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSG 59
+R+ S++ + F +L+ C + +LK+ IH ++ S + F +T ++++
Sbjct: 19 SRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKC 78
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
+ A +F ++ E ++ +N MI Y N +A+ L +M + PD T
Sbjct: 79 RQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHR-----PDSIT 133
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ ++ + A +G +H +V + G +S AL+D+Y KC + A +F+ M
Sbjct: 134 IVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMD 193
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
R +V+WN++I GY + G + A ++F KM LD
Sbjct: 194 HRTVVSWNSMIDGYVQSGDAEGAMLIFQKM------------------------LD---- 225
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
G++P ++++ L ACA LG LE G+++H D+ L + N+LI MY KC
Sbjct: 226 ---EGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKR 282
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++ A+ +F + + +VSW+ +I G A +G ++A++ F EMQ + P+ T + ++ A
Sbjct: 283 VDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPA 342
Query: 360 CAHTGF-----WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
A W GL+ ++R ++ + LVD+ + G + A + + M
Sbjct: 343 LAELSIPRQAKWIHGLV----IRR--FLDKNVFVMTALVDMYAKCGAIHTARKLFDMM 394
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 280/528 (53%), Gaps = 42/528 (7%)
Query: 7 ALSIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA 63
A I+ + + IL++C E+ ++IH+ +K ++ +ID+ + G L
Sbjct: 338 AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
A + + +KE +V + +MI Y + A+ +K+M + I PD L
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK-----CGIWPDNIGLASA 452
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
I CAG+ G QIHA + G D+
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSGYSG-------------------------------DV 481
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
WN L++ YAR G++++A F+++ + ++W ++SG+ G + EAL VF +M
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQS 541
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G++ + + VS L A A L ++ G+ IH K T + NALI +Y KCG A
Sbjct: 542 GVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA 601
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
F +M ER+ VSW+T+I + HG+ +A+ LF +M++ + PND+TFIG+L+AC+H
Sbjct: 602 KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G EGL YF SM ++ I + +HY C++D+ GRAG+LD+A IEEMP+ DA +W +
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LLS+C+ + N+E+ A +HLL LEP D+ +YVLLSN YA +W + ++RK++R + +
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGV 781
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
+K PG S IEV N V F GD P + I+ LA+ DR V
Sbjct: 782 RKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIY---NFLAVINDRVAKV 826
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 199/472 (42%), Gaps = 87/472 (18%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+ +IH + + L + + +ID+ + G + A +F+++ + + AM+ Y
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
N L A+ LY+QM R + ++P + L V+ SC + G+ IHA K G
Sbjct: 121 NGLGEEALGLYRQMHR-----AGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFC 175
Query: 150 SHSITENALLDLYGKC---------------------DELIEAH----------KVFEEM 178
S NA++ LY +C + LI H ++FEEM
Sbjct: 176 SEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEM 235
Query: 179 T----DRDIVAWNNLISGYARLGQMKK--------------------------------- 201
D V ++L++ A LG ++K
Sbjct: 236 QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV 295
Query: 202 --ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
A ++F+ T +V W M+ + I A++ ++F QMQ GI P++ + +L C
Sbjct: 296 ETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTC 355
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
++LGE IH K + LI+MY K G + +A ++ + + E+DVVSW+
Sbjct: 356 TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWT 415
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL-----MYFD 374
++I G H A+ F EMQ+ + P++I +S CA +GL +Y
Sbjct: 416 SMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVS 475
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
D I + LV+L R GR+ +A + EE+ K D W L+S
Sbjct: 476 GYSGDVSI------WNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVS 520
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 287/548 (52%), Gaps = 14/548 (2%)
Query: 3 ARIGALSIKELEDRFVPILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG 59
A + A IK F+ + ++C + +K++H ++ + FL +I
Sbjct: 121 ASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKC 180
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
+ A +F + +V + +M Y N L L + ++ +M + + P+ T
Sbjct: 181 KCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNG-----VKPNSVT 235
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L ++ +C+ L G+ IH + G+ + +AL+ LY +C + +A VF+ M
Sbjct: 236 LSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMP 295
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALD 235
RD+V+WN +++ Y + K LF +M + +W A+I G G +A++
Sbjct: 296 HRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVE 355
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
+ R+MQ +G +P++I+I S LPAC+ L SL +G+ +H Y ++ L+ AL+ MY
Sbjct: 356 MLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYA 415
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
KCG +N + +FD + +DVV+W+T+I A HG + + LF M + + PN +TF G
Sbjct: 416 KCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTG 475
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+LS C+H+ EGL F+SM RDH +E HY C+VD+ RAGRL +A I+ MPM+
Sbjct: 476 VLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPME 535
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
P A WG+LL +CR Y N+E+A I+ L +EP + GNYV L NI W + S R
Sbjct: 536 PTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEAR 595
Query: 476 KLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA--KDVID 533
L++ + + KTPGCS ++V + V FV GD I+ L+ L A K D
Sbjct: 596 ILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTD 655
Query: 534 IMYEDIGE 541
+ +DI +
Sbjct: 656 YVLQDIDQ 663
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 177/421 (42%), Gaps = 73/421 (17%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD A LF + +P+ + +I A+T L AI LY + I P
Sbjct: 80 GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASL-----RARGIKPHNSV 134
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
V K+C S K++H + G+ S + NAL+ YGKC + A +VF+++
Sbjct: 135 FLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLV 194
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+D+V+W T+M S Y + G L VF +
Sbjct: 195 VKDVVSW-------------------------------TSMSSCYVNCGLPRLGLAVFCE 223
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M G++P+ +++ S+LPAC++L L+ G IH + ++ ++ +C+AL+ +Y +C
Sbjct: 224 MGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLS 283
Query: 300 INQASQLFDQMVERDVVS-----------------------------------WSTVIGG 324
+ QA +FD M RDVVS W+ VIGG
Sbjct: 284 VKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGG 343
Query: 325 LANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEH 384
+G+ KA+ + +MQ L PN IT L AC+ G + R H +
Sbjct: 344 CMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFR-HWLIG 402
Query: 385 KIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ LV + + G L+ + N+ +M + D W +++ + + N ++ E +
Sbjct: 403 DLTTMTALVYMYAKCGDLNLSRNVF-DMICRKDVVAWNTMIIANAMHGNGREVLLLFESM 461
Query: 445 L 445
L
Sbjct: 462 L 462
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 15/316 (4%)
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L+ +G ++A+ LFD +P + + +IS +T G EA+ ++ ++ GI+P
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++V AC G + +H + ++ + NALI Y KC C+ A ++FD
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+V +DVVSW+++ N G + +F EM V PN +T +L AC+
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKS 251
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS-- 426
G R IE+ + LV L R + QA + + MP + D W +L+
Sbjct: 252 GRAIHGFAVRHGMIEN-VFVCSALVSLYARCLSVKQARLVFDLMPHR-DVVSWNGVLTAY 309
Query: 427 -SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+ R Y M V E T N V+ + ++G+ E M + +++ K
Sbjct: 310 FTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCM--ENGQTEKAVEMLRKMQNLGFKP 367
Query: 486 T--------PGCSLIE 493
P CS++E
Sbjct: 368 NQITISSFLPACSILE 383
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 275/521 (52%), Gaps = 39/521 (7%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
R+ A ++ + + +L++C + E+ ++IH+ +K ++ +ID+ + G
Sbjct: 335 RMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYG 394
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
L A + ++E +V + +MI Y + A+ +K+M I PD L
Sbjct: 395 WLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEM-----QACGIWPDNIGL 449
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
I +CAG+ G QIHA V G +
Sbjct: 450 ASAISACAGIKAVHQGSQIHARVYVSGYSA------------------------------ 479
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
D+ WN L+ YAR G K+A F+ + + ++W +ISG+ G Y EAL VF +M
Sbjct: 480 -DVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKM 538
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
G + + + VS + A A L ++ G+ IH K T I NALI +Y KCG I
Sbjct: 539 DQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSI 598
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
A F +M +R+ VSW+T+I + HG+ +A+ LF +M++ + P+D+TF+G+L+AC
Sbjct: 599 EDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTAC 658
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
+H G EGL YF SM +H I + +HY C+VD+LGRAG+LD+A +EEMP+ D+ +
Sbjct: 659 SHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMV 718
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
W +LLS+C+ + NLEI A +HLL LEP D+ +YVLLSN YA G+W ++RK+++
Sbjct: 719 WRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKD 778
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+ ++K PG S IEV N V F GD P I+ L L
Sbjct: 779 RGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHL 819
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 185/398 (46%), Gaps = 38/398 (9%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+ +IH + + LS + +ID+ G + A +F+++ + + A++ Y
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
N L A+ LY++M R S ++P + L ++ +C LG+ IH V K G
Sbjct: 121 NGLGEEAVRLYREMHR-----SGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFF 175
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
S + NAL+ LY +C A +VF +M D V +N LISG+A+ G +
Sbjct: 176 SETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDR-------- 227
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
AL +F +MQ+ G+ PD ++I S+L AC+ +G L G+
Sbjct: 228 -----------------------ALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGK 264
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
+H Y K + ++ +L+++Y+K G I +A Q+FD +VV W+ ++
Sbjct: 265 QLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQID 324
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
K+ +F+ M V PN T+ +L C HTG G S+ + + +
Sbjct: 325 DLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ-IHSLTIKNGFQSDMYVS 383
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
G L+D+ + G LD+A I+ +M + D W S+++
Sbjct: 384 GVLIDMYSKYGWLDKAQRIL-DMIEEKDVVSWTSMIAG 420
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 177/416 (42%), Gaps = 51/416 (12%)
Query: 20 ILQSCEN--LIELKK-IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
IL +C L +L + IH Q+ K F+ +I + A +F + +
Sbjct: 149 ILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCD 208
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+N +I + A+ ++ +M S + PD T+ ++ +C+ + G
Sbjct: 209 SVTFNTLISGHAQCGHGDRALGIFDEMQL-----SGLSPDSVTIASLLAACSAVGDLRKG 263
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
KQ+H+++ K G+ I E +LLDLY K
Sbjct: 264 KQLHSYLLKAGMSLDYIMEGSLLDLYVKS------------------------------- 292
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G +++A +FD T +V W M+ Y I A++ D+F +M G+ P++ + +L
Sbjct: 293 GDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCML 352
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
C G + LGE IH KN + LI+MY K G +++A ++ D + E+DVV
Sbjct: 353 RTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVV 412
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-----HTGFWNEGLM 371
SW+++I G H +A+ F EMQ + P++I +SACA H G +
Sbjct: 413 SWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARV 472
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
Y D I + LV L R G +A + E + K + W L+S
Sbjct: 473 YVSGYSADVSI------WNGLVYLYARCGISKEAFSSFEAIEHK-EGITWNGLISG 521
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 283/520 (54%), Gaps = 39/520 (7%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L+SC +++L+ +H I++ + + ++++ + + +F+ +
Sbjct: 108 FPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMP 167
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V YN +I Y + +Y A+ + ++M S + PD FTL V+ + +
Sbjct: 168 RKDVVSYNTVIAGYAQSGMYEDALRMVREM-----GTSDLKPDAFTLSSVLPIFSEYVDV 222
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK+IH +V + G+ S ++L+D+Y K + ++ +VF + RD +
Sbjct: 223 LKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSI--------- 273
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
SW ++++GY G Y EAL +FRQM + P ++
Sbjct: 274 ----------------------SWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFS 311
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV+PACA L +L LG+ +H Y + R I +AL++MY KCG I A ++FD+M
Sbjct: 312 SVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLH 371
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D VSW+ +I G A HG H+A+ LF EM+R V PN + F+ +L+AC+H G +E YF
Sbjct: 372 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 431
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SM + + + ++EHY + DLLGRAG+L++A + I +M ++P +W +LLSSC + N
Sbjct: 432 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKN 491
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
LE+A E + ++ E+ G YVL+ N+YA +GRW++++++R +R K ++K P CS IE
Sbjct: 492 LELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIE 551
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
+ N+ FVSGD + P + I L+ + ++ V D
Sbjct: 552 MKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVAD 591
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 187/397 (47%), Gaps = 39/397 (9%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
+ K++H Q ++ S S+ + +I + + L A L+FK ++ P V + ++IR +T
Sbjct: 23 QAKQLHAQFIR-TQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFT 81
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
+ L+ A+ + +M R PD P V+KSC ++ G+ +H + + G+
Sbjct: 82 DQSLFSRALASFVEMRASGRC-----PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM 136
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
T NAL+++Y K + KVFE M +D+V++N +I+GYA+ G
Sbjct: 137 DCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGM---------- 186
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
Y +AL + R+M ++PD ++ SVLP ++ + G
Sbjct: 187 ---------------------YEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKG 225
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+ IH Y + + I ++L++MY K I + ++F + RD +SW++++ G +
Sbjct: 226 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQN 285
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G+ ++A+ LF +M KV P + F ++ ACAH + G + R I
Sbjct: 286 GRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG-GFGRNIFI 344
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
LVD+ + G + A I + M + D W +++
Sbjct: 345 ASALVDMYSKCGNIQAARKIFDRMNLH-DEVSWTAII 380
>gi|10086462|gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thaliana]
Length = 539
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 297/529 (56%), Gaps = 44/529 (8%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
++Q C + ++K++ + L QS+FL +++++ C + GDL++A +F+ + +P
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLT 68
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP-DKFTLPFVIKSCAGLLCPSLG 136
+NA+IR + + LA + Y+ ML+ + S I D T F +K+CA LC S
Sbjct: 69 NDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
Q+H + + GL + S+ LLD Y K +LI A+K
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK----------------------- 165
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
LFD+MP + SW A+I+G +EA++++++M+ GI E+++V+ L
Sbjct: 166 --------LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAAL 217
Query: 257 PACAQLGSLELGEWI-HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERD 314
AC+ LG ++ GE I H Y + N ++ NA I+MY KCG +++A Q+F+Q ++
Sbjct: 218 GACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKS 272
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VV+W+T+I G A HG+AH+A+ +F +++ + P+D++++ L+AC H G GL F+
Sbjct: 273 VVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFN 332
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+M +E ++HYGC+VDLL RAGRL +A +II M M PD +W SLL + YS++
Sbjct: 333 NMAC-KGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDV 391
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E+A IA + + + G++VLLSN+YA GRW+DV R+R + SK +KK PG S IE
Sbjct: 392 EMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEA 451
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLE--LLALHQDRAKDVIDIMYEDIGE 541
+ EF + D + ++I+ ++ + +D ++ DIGE
Sbjct: 452 KGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGE 500
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 176/579 (30%), Positives = 302/579 (52%), Gaps = 78/579 (13%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L+ C + +L+K IH Q++ + + F +T ++++ + A +F ++
Sbjct: 178 FTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMP 237
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E ++ +N +I Y N A+ L +M + + PD T+ ++ + A +
Sbjct: 238 ERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKR-----PDSITIVSILPAVADVGSL 292
Query: 134 SLGKQIHAHVCKFGLKSHS-------------------------------ITENALLDLY 162
+G+ IH + + G +S ++ N+++D Y
Sbjct: 293 RIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGY 352
Query: 163 GKCDELIEAHKVFEEMTDR---------------------------------------DI 183
+ + A ++F++M D D+
Sbjct: 353 VQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDV 412
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
N+LIS Y++ ++ A +F+ + + T+VSW AMI GY G EA+D F +MQ+
Sbjct: 413 SVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQ 472
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
I+PD ++VSV+PA A+L L +WIH + L + + AL++MY KCG ++ A
Sbjct: 473 NIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTA 532
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+LFD M ER V +W+ +I G HG A+ LF +M++ + PN++TF+ +LSAC+H+
Sbjct: 533 RKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G EG YF SMK+D+ +E ++HYG +VDLLGRA RL++A + I++MP++P ++G+
Sbjct: 593 GLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGA 652
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
+L +CR + N+E+ A + L+P+D G +VLL+NIYA W+ V+R+R + K +
Sbjct: 653 MLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGI 712
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
+KTPG S++E+ NEV F SG + P K I+ LE L
Sbjct: 713 QKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLG 751
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 189/396 (47%), Gaps = 37/396 (9%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+ C ++ EL + I+K L + TK++ + G L A+ +F+ +++ L
Sbjct: 83 LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDEL 142
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
Y+ M++ Y N A++ + +M D + P + +++K C GK+I
Sbjct: 143 YHTMLKGYARNSSLDDAVSFFCRMRYDG-----VRPVVYNFTYLLKVCGDNADLRKGKEI 197
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H + G S+ ++++Y KC + EA+K+F+ M +RD+V WN +ISGYA+ G
Sbjct: 198 HCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNG-- 255
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
F K AL++ +MQ G PD I+IVS+LPA
Sbjct: 256 ------FGKT-----------------------ALELVLRMQEEGKRPDSITIVSILPAV 286
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A +GSL +G IH Y + + AL++MY KCG + A +FD+M + VVSW+
Sbjct: 287 ADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWN 346
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
++I G +G A+ +F +M +V ++T +G L ACA G +G + +
Sbjct: 347 SMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG-RFVHKLLDQ 405
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+ + L+ + + R+D A I E + K
Sbjct: 406 LELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHK 441
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 39/299 (13%)
Query: 131 LCPSLGKQIHAHV---CKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
LC S+ K++H + K GL S + + L+ L+ K L EA +VF+ + D+
Sbjct: 86 LCTSM-KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDK------ 138
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
D++ +T M+ GY S +A+ F +M+ G+ P
Sbjct: 139 ------------------IDELYHT-------MLKGYARNSSLDDAVSFFCRMRYDGVRP 173
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+ +L C L G+ IH N ++ MY KC + +A ++F
Sbjct: 174 VVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMF 233
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D+M ERD+V W+T+I G A +G A+ L MQ P+ IT + +L A A G
Sbjct: 234 DRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLR 293
Query: 368 EGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
G ++ SM+ E + LVD+ + G + A I + M K W S++
Sbjct: 294 IGRSIHGYSMRAG--FESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVS-WNSMI 349
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 286/503 (56%), Gaps = 40/503 (7%)
Query: 17 FVPILQSCEN--LIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L + N L++L +K+H +I++ L + T ++ + GD++ A ++F ++
Sbjct: 151 FVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLP 210
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E NV + +I Y +A+ L + M + + + P+K T +++ C
Sbjct: 211 EKNVVTWTLLIAGYAQQGQVDVALELLETMQQ-----AEVAPNKITFASILQGCTTPAAL 265
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK++H ++ + G YG R++ N+LI+ Y
Sbjct: 266 EHGKKVHRYIIQSG--------------YG-----------------RELWVVNSLITMY 294
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
+ G +++AR LF +P+ +V+WTAM++GY +G + EA+++FR+MQ GI+PD+++
Sbjct: 295 CKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFT 354
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL +C+ L+ G+ IH + +AL+ MY KCG ++ AS +F+QM ER
Sbjct: 355 SVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSER 414
Query: 314 DVVSWSTVIGGL-ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
+VV+W+ +I G A HG+ +A+ F +M++ + P+ +TF +LSAC H G EG +
Sbjct: 415 NVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKH 474
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
F SM D+ I+ +EHY C VDLLGRAG L++A N+I MP P +WG+LLS+CR +S
Sbjct: 475 FRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHS 534
Query: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
++E A E++L L+P+D G YV LS+IYA GR+ED ++R+++ + + K PG S I
Sbjct: 535 DVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWI 594
Query: 493 EVNNEVQEFVSGDDTKPFLKDIF 515
EV+ +V F D + P + I+
Sbjct: 595 EVDGKVHVFHVEDKSHPESEQIY 617
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 199/423 (47%), Gaps = 53/423 (12%)
Query: 15 DRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
D F +LQ C L L +++H ILK + + +L ++ + G L A +F
Sbjct: 48 DVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDS 107
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+++ N+ + AMI A+ + A Y+ M + PDK T ++ +
Sbjct: 108 IRDRNIVSWTAMIEAFVAGNKNLEAFKCYETM-----KLAGCKPDKVTFVSLLNAFTNPE 162
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
LG+++H + + GL+ +L+ +Y KC
Sbjct: 163 LLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKC-------------------------- 196
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G + KAR++FD++P +V+WT +I+GY G AL++ MQ + P++I+
Sbjct: 197 -----GDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKIT 251
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
S+L C +LE G+ +H Y ++ R + N+LI MY KCG + +A +LF +
Sbjct: 252 FASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLP 311
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
RDVV+W+ ++ G A G +AI+LF MQ+ + P+ +TF +L++C+ F EG
Sbjct: 312 HRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEG-- 369
Query: 372 YFDSMKRDH----HIEHKIEHY--GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
KR H H + ++ Y LV + + G +D A + +M + + W +++
Sbjct: 370 -----KRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSER-NVVAWTAII 423
Query: 426 SSC 428
+ C
Sbjct: 424 TGC 426
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 180/398 (45%), Gaps = 69/398 (17%)
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
G+ + D F +++ CA L G+++HA + K G++ + EN LL +Y KC L
Sbjct: 42 GTRVYSDVFR--GLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLT 99
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+A +VF+ + DR+IV SWTAMI +
Sbjct: 100 DARRVFDSIRDRNIV-------------------------------SWTAMIEAFVAGNK 128
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
EA + M++ G +PD+++ VS+L A L+LG+ +HM + L + +
Sbjct: 129 NLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTS 188
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
L+ MY KCG I++A +FD++ E++VV+W+ +I G A G+ A+ L MQ+ +V PN
Sbjct: 189 LVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPN 248
Query: 350 DITFIGLLSACAHTGFWNEG-----------------------LMYF------DSMKRDH 380
ITF +L C G MY ++ K
Sbjct: 249 KITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFS 308
Query: 381 HIEHK-IEHYGCLVDLLGRAGRLDQALNIIEEMP---MKPDAKIWGSLLSSCRTYSNLEI 436
+ H+ + + +V + G D+A+N+ M +KPD + S+L+SC + + L+
Sbjct: 309 DLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQE 368
Query: 437 AVIAMEHLLVLEPEDTGNYV--LLSNIYAKHGRWEDVS 472
+ LV + Y+ L ++YAK G +D S
Sbjct: 369 GK-RIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDAS 405
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
+S G EAL + M + G +L CA+L SLE G +H K+ +
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHE 340
+ N L+ MY KCG + A ++FD + +R++VSW+ +I K +A +
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 341 MQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE---HYGC-LVDLL 396
M+ P+ +TF+ LL+A F N L+ +E +E G LV +
Sbjct: 139 MKLAGCKPDKVTFVSLLNA-----FTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMY 193
Query: 397 GRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
+ G + +A I + +P K + W L++ +++A+ +E +
Sbjct: 194 AKCGDISKARVIFDRLPEK-NVVTWTLLIAGYAQQGQVDVALELLETM 240
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 178/491 (36%), Positives = 269/491 (54%), Gaps = 9/491 (1%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T MI G+L A + E V +NAMI Y ++ + A+ ++++M
Sbjct: 229 TTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLG-- 286
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF----GLKSHSITENALLDLYGKC 165
I D+FT V+ +CA GKQ+HA++ + L NAL LY KC
Sbjct: 287 ---IQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKC 343
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
++ EA +VF +M +D+V+WN ++SGY G++ +A+ F++MP +++WT MISG
Sbjct: 344 GKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLA 403
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV 285
G E+L +F +M+ G EP + + + ACA L +L G +H +
Sbjct: 404 QNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLS 463
Query: 286 ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK 345
NALI MY KCG + A LF M D VSW+ +I L HG +A+ LF M +
Sbjct: 464 AGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKED 523
Query: 346 VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQA 405
+ P+ ITF+ +LS C+H G EG YF SM + I +HY ++DLL RAG+ +A
Sbjct: 524 ILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEA 583
Query: 406 LNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKH 465
++IE MP++P IW +LL+ CR + N+++ + A E L L P+ G YVLLSN+YA
Sbjct: 584 KDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATV 643
Query: 466 GRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQ 525
GRW+DV+++RKL+R K +KK PGCS IEV N+V F+ D P ++ ++ LE L L
Sbjct: 644 GRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKM 703
Query: 526 DRAKDVIDIMY 536
+ + D +
Sbjct: 704 RKLGYIPDTKF 714
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 209/425 (49%), Gaps = 61/425 (14%)
Query: 7 ALSIKELEDRFVPILQSC--ENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGD 61
A +++ L +++ LQ C N + + +H ++ +++ ++IDV D
Sbjct: 6 AANVRRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSD 65
Query: 62 LAYASLLFKQVKEPNVF---------------------------------LYNAMIRAYT 88
L A LF ++++P++ YNAMI Y+
Sbjct: 66 LVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYS 125
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL-CPSLGKQIHAHVCKFG 147
+N+ AI L++ +LR+ PD FT V+ + A ++ +QIH V K G
Sbjct: 126 HNNDGFGAIELFRDLLRNG-----FRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSG 180
Query: 148 LKSHSITENALLDLYGKC---------DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
+ NALL ++ KC + A K+F+EMT+RD ++W +I+GY R G+
Sbjct: 181 SGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGE 240
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+ AR D M +V+W AMISGY H G + EAL++FR+M ++GI+ DE + SVL A
Sbjct: 241 LDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSA 300
Query: 259 CAQLGSLELGEWIHMYC----DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
CA G G+ +H Y + L + NAL +Y KCG +++A Q+F+QM +D
Sbjct: 301 CANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKD 360
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+VSW+ ++ G N G+ +A F EM N +T+ ++S A GF E L F+
Sbjct: 361 LVSWNAILSGYVNAGRIDEAKSFFEEMPE----RNLLTWTVMISGLAQNGFGEESLKLFN 416
Query: 375 SMKRD 379
MK +
Sbjct: 417 RMKSE 421
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 14/229 (6%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
L+ +++H Q+++ S +I + G + A LF + + +NAMI A
Sbjct: 443 LMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAA 502
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGLLCPSLGKQIHAHVC 144
+ A+ L++ ML++ ILPD+ T V+ +C AGL+ + +
Sbjct: 503 LGQHGHGAQALELFELMLKED-----ILPDRITFLTVLSTCSHAGLV-EEGHRYFKSMSG 556
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVAWNNLISGYARLGQM---- 199
+G+ ++DL + + EA + E M + W L++G G M
Sbjct: 557 LYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGI 616
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
+ A LF+ MP ++ + + Y +G + + V + M+ G++ +
Sbjct: 617 QAAERLFELMPQHD-GTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKE 664
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 281/506 (55%), Gaps = 39/506 (7%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L++C ++++ KIH+ ++K F+ T ++ + + A +F + + N
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V + A+I Y ++ + AI +K++L + PD F+L V+ +CA L + G
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMG-----LKPDSFSLVKVLAACARLGDCTSG 234
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ I ++ G+ + +LLD+Y KC
Sbjct: 235 EWIDRYISDSGMGRNVFVATSLLDMYVKC------------------------------- 263
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G +++A ++F MP IVSW+ MI GY G +ALD+F QMQ ++PD ++V VL
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA LG+L+LG W D+N L V+ ALI+MY KCG + QA ++F M ++D V
Sbjct: 324 SACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRV 383
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
W+ ++ GL+ +G A LF +++ + P++ TFIGLL C H GF NEG +F++M
Sbjct: 384 VWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNM 443
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
KR + IEHYGC+VDLLGRAG L++A +I MPMKP+A +WG+LL C+ + + +
Sbjct: 444 KRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHL 503
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A ++ L+ LEP ++GNYV LSNIY+ + RWE+ ++R ++ + ++K CS IE++
Sbjct: 504 AEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDG 563
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLA 522
V EF+ GD + + I+ L+ L
Sbjct: 564 IVHEFLVGDKSHWLSEKIYAKLDELG 589
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 214/397 (53%), Gaps = 38/397 (9%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
+LK IH ++L+ L Q N+L+ ++ G Y+ L+F QVKEPN+FL+N MIR
Sbjct: 31 QLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLV 90
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
+ + AI+LY M G LP+ FT+PFV+K+CA L LG +IH+ + K G
Sbjct: 91 SKDCFDDAIHLYGSM-----RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY 145
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ +LL LY KCD +A KVF+++ D+++V+W +I+GY G +
Sbjct: 146 DHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFR-------- 197
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
EA+ F+++ +G++PD S+V VL ACA+LG G
Sbjct: 198 -----------------------EAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
EWI Y + + R + +L++MY+KCG + +A+ +F M E+D+VSWST+I G A +
Sbjct: 235 EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFN 294
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G +A+ LF +MQ + P+ T +G+LSACA G + G+ M R+ + + +
Sbjct: 295 GLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG 354
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
L+D+ + G + QA I M K D +W +++
Sbjct: 355 TA-LIDMYSKCGSVTQAWEIFTAMK-KKDRVVWNAMM 389
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 258/454 (56%), Gaps = 36/454 (7%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F+ + E ++ +N +I N LYG + + ++M G+ + PD FTL V+
Sbjct: 256 IFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREM-----GGANLKPDSFTLSSVLPLI 310
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
A + S GK+IH + GL + ++L+D+Y KC ++++++VF +T+RD +
Sbjct: 311 AENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGI--- 367
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
SW ++I+G G + E L FRQM M I+P
Sbjct: 368 ----------------------------SWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKP 399
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
S S++PACA L +L LG+ +H Y +N I ++L++MY KCG I A Q+F
Sbjct: 400 KSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIF 459
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D+M RD+VSW+ +I G A HG A AI LF +M+ + PN + F+ +L+AC+H G +
Sbjct: 460 DRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVD 519
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
E YF+SM D I +EHY + DLLGRAGRL++A + I MP+ P +W +LLS+
Sbjct: 520 EAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSA 579
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR + N+++A +L ++P++TG Y+LL+NIY+ RW++ ++ R +R ++KTP
Sbjct: 580 CRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTP 639
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
CS IEV N+V F++GD++ P + I +E+L
Sbjct: 640 ACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVL 673
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 223/497 (44%), Gaps = 76/497 (15%)
Query: 23 SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL-LFKQVKEPNVFLYN 81
S ++ + +++H Q+LK+ S+ ++ S +L + SL LF + P +
Sbjct: 20 SIKSRSQAQQLHAQVLKF--QASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWK 77
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
++IR YT++ L ++ + ML S + PD P V+K+CA L+ +LG+ +H
Sbjct: 78 SVIRCYTSHGLPHKSLGSFIGML-----ASGLYPDHNVFPSVLKACAMLMDLNLGESLHG 132
Query: 142 HVCKFGLKSHSITENALLDLYGKCDEL-------IEAHKVFEEMTDR------------- 181
++ + GL T NAL+++Y K L + A +V +EMT+R
Sbjct: 133 YIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGN 192
Query: 182 ------DIVAWNNLISGYAR------------------------LGQMKK---------- 201
DI A+N +S +R LGQ K
Sbjct: 193 QGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDS 252
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQ 261
R +F+ MP +VSW +I+G G Y E L + R+M ++PD ++ SVLP A+
Sbjct: 253 VRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAE 312
Query: 262 LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTV 321
+ G+ IH + L + ++LI+MY KC + + ++F + ERD +SW+++
Sbjct: 313 NVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSI 372
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH 381
I G +G + + F +M K+ P +F ++ ACAH + G + R+
Sbjct: 373 IAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-G 431
Query: 382 IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAM 441
+ I LVD+ + G + A I + M ++ D W +++ C + + A+
Sbjct: 432 FDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAMIMGCALHGHALDAIELF 490
Query: 442 EHLLV--LEPEDTGNYV 456
E + +EP NYV
Sbjct: 491 EQMKTEGIEP----NYV 503
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 285/508 (56%), Gaps = 38/508 (7%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
E +++H ++K +L T++I + N L A + ++ E NV + AMI Y+
Sbjct: 495 EGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYS 554
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
A++L+ +ML S P++FT V+ SC LG+QIH+ V K
Sbjct: 555 QRGYASEALHLFVEMLM-----SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSF 609
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+SH ++LLD+Y A+ G++ +AR +FD
Sbjct: 610 ESHIFVGSSLLDMY-------------------------------AKAGKICEARRVFDG 638
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+P +VS TA+ISGY +G EALD+FR++Q G+ + ++ SVL A + L +L+ G
Sbjct: 639 LPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHG 698
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+H + + L V+ N+LI+MY KCG + + ++FD M ER V+SW+ ++ G + H
Sbjct: 699 RQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKH 758
Query: 329 GKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGL-MYFDSMKRDHHIEHKI 386
G +A+ LF M + KV P+ +TF+ +LS C+H G + GL ++++ + + E +I
Sbjct: 759 GLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEI 818
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
EHYGC+VDL GRAGR+++A I++MP +P A IWGSLL +CR + N+ I LL
Sbjct: 819 EHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLE 878
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDD 506
+E E+ GNYV+LSN+YA GRW+DV +R+L++ K++ K PG S IE++ + F + D
Sbjct: 879 IESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDR 938
Query: 507 TKPFLKDIFWLLELLALHQDRAKDVIDI 534
+ P +++F + L++ A V ++
Sbjct: 939 SHPRKEEVFAKVRELSIKIKEAGYVPEL 966
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 1/177 (0%)
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+M + G+E + SVL C ++ G+ +H + K + LI +Y KC
Sbjct: 467 EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR 526
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
C+ A ++ D+M ER+VVSW+ +I G + G A +A+HLF EM PN+ TF +L+
Sbjct: 527 CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 586
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+C + + G S+ E I L+D+ +AG++ +A + + +P +
Sbjct: 587 SCTSSSGFQLGRQ-IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 642
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 280/528 (53%), Gaps = 42/528 (7%)
Query: 7 ALSIKELEDRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLA 63
A I+ + + IL++C E+ ++IH+ +K ++ +ID+ + G L
Sbjct: 338 AAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
A + + +KE +V + +MI Y + A+ +K+M + I PD L
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK-----CGIWPDNIGLASA 452
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
I CAG+ G QIHA + G D+
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSGYSG-------------------------------DV 481
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
WN L++ YAR G++++A F+++ + ++W ++SG+ G + EAL VF +M
Sbjct: 482 SIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQS 541
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G++ + + VS L A A L ++ G+ IH K T + NALI +Y KCG A
Sbjct: 542 GVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA 601
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
F +M ER+ VSW+T+I + HG+ +A+ LF +M++ + PND+TFIG+L+AC+H
Sbjct: 602 KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
G EGL YF SM ++ I + +HY C++D+ GRAG+LD+A IEEMP+ DA +W +
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LLS+C+ + N+E+ A +HLL LEP D+ +YVLLSN YA +W + ++RK++R + +
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGV 781
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
+K PG S IEV N V F GD P + I+ LA+ DR V
Sbjct: 782 RKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIY---NFLAVINDRVAKV 826
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 199/472 (42%), Gaps = 87/472 (18%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+ +IH + + L + + +ID+ + G + A +F+++ + + AM+ Y
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
N L A+ LY+QM R + ++P + L V+ SC + G+ IHA K G
Sbjct: 121 NGLGEEALGLYRQMHR-----AGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFC 175
Query: 150 SHSITENALLDLYGKC---------------------DELIEAH----------KVFEEM 178
S NA++ LY +C + LI H ++FEEM
Sbjct: 176 SEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEM 235
Query: 179 T----DRDIVAWNNLISGYARLGQMKK--------------------------------- 201
D V ++L++ A LG ++K
Sbjct: 236 QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV 295
Query: 202 --ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
A ++F+ T +V W M+ + I A++ ++F QMQ GI P++ + +L C
Sbjct: 296 ETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTC 355
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
++LGE IH K + LI+MY K G + +A ++ + + E+DVVSW+
Sbjct: 356 TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWT 415
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL-----MYFD 374
++I G H A+ F EMQ+ + P++I +S CA +GL +Y
Sbjct: 416 SMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVS 475
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
D I + LV+L R GR+ +A + EE+ K D W L+S
Sbjct: 476 GYSGDVSI------WNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVS 520
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 280/506 (55%), Gaps = 39/506 (7%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+L++C ++++ KIH+ ++K F+ T ++ + + A +F + + N
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V + A+I Y ++ + AI +K++L + PD F+L V+ +CA L + G
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMG-----LKPDSFSLVKVLAACARLGDCTSG 234
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ I ++ G+ + +LLD+Y KC
Sbjct: 235 EWIDRYISDSGMGRNVFVATSLLDMYVKC------------------------------- 263
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G +++A ++F MP IVSW+ MI GY G +ALD+F QMQ ++PD ++V VL
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA LG+L+LG W D+N L V+ ALI+MY KCG + QA ++F M +D V
Sbjct: 324 SACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRV 383
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
W+ ++ GL+ +G A LF +++ + P++ TFIGLL C H GF NEG +F++M
Sbjct: 384 VWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNM 443
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
KR + IEHYGC+VDLLGRAG L++A +I MPMKP+A +WG+LL C+ + + +
Sbjct: 444 KRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHL 503
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A ++ L+ LEP ++GNYV LSNIY+ + RWE+ ++R ++ + ++K CS IE++
Sbjct: 504 AEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDG 563
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLA 522
V EF+ GD + + I+ L+ L
Sbjct: 564 IVHEFLVGDKSHWLSEKIYAKLDELG 589
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 214/397 (53%), Gaps = 38/397 (9%)
Query: 29 ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYT 88
+LK IH ++L+ L Q N+L+ ++ G Y+ L+F QVKEPN+FL+N MIR
Sbjct: 31 QLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLV 90
Query: 89 NNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
+ + AI+LY M G LP+ FT+PFV+K+CA L LG +IH+ + K G
Sbjct: 91 SKDCFDDAIHLYGSM-----RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY 145
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ +LL LY KCD +A KVF+++ D+++V+W +I+GY G +
Sbjct: 146 DHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFR-------- 197
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
EA+ F+++ +G++PD S+V VL ACA+LG G
Sbjct: 198 -----------------------EAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
EWI Y + + R + +L++MY+KCG + +A+ +F M E+D+VSWST+I G A +
Sbjct: 235 EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFN 294
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G +A+ LF +MQ + P+ T +G+LSACA G + G+ M R+ + + +
Sbjct: 295 GLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG 354
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
L+D+ + G + QA I M K D +W +++
Sbjct: 355 TA-LIDMYSKCGSVTQAWEIFTAMKRK-DRVVWNAMM 389
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 269/461 (58%), Gaps = 6/461 (1%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G L A L + NV + +I Y+ A++ + ML D I PD+ T
Sbjct: 185 GLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDG-----IEPDEVT 239
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM- 178
+ ++ +CA L G+ +H V + G+ AL+D+Y KC ++ A +VF+ +
Sbjct: 240 VIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALG 299
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
R +WN +I GY +LG + AR LFD+M +V++ ++I+GY H G EAL +F
Sbjct: 300 RGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFM 359
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
QM+ + D ++VS+L ACA LG+L G +H ++ + + AL++MY+KCG
Sbjct: 360 QMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCG 419
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
+ +AS +F M RDV +WS +I GLA +G A+ F M+ PN +T+I +L+
Sbjct: 420 RVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILT 479
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H+ +EG +YF+ M+ H+I IEHYGC++DLLGR+G LD+A++++ MPM+P+A
Sbjct: 480 ACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNA 539
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
IW S+LS+CR + + +A A EHLL LEP++ YV L NIY +WED S++R+L+
Sbjct: 540 VIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLM 599
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
+ +KK G S I V +V +F+ D T P + +I ++E
Sbjct: 600 EERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMME 640
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 204/404 (50%), Gaps = 51/404 (12%)
Query: 62 LAYASLLFKQVKEPNVFLYNAMIRA-YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
L YA LF ++ + FL++ +RA + + + LY++M RTG + D FT
Sbjct: 53 LRYALCLFDRMP-CSTFLFDTALRACFRASSGPESPLILYRRM---RRTG--VCTDAFTF 106
Query: 121 PFVIKSCAG-----LLCPSLGKQIHAHVCKFGLKSH-SITENALLDLYGKCDELIEAHKV 174
F+ K CA LLC + +HA + L S + N ++ +Y + +A +
Sbjct: 107 HFLFKCCARGRAHVLLC----QMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRA 162
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F+++ +D VAW +ISG A+LG + A L P ++SWT +ISGY+ G AEA+
Sbjct: 163 FDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAV 222
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
D F M GIEPDE++++ +L ACAQL L G +H + +L + ALI+MY
Sbjct: 223 DCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMY 282
Query: 295 IKCGCINQASQ--------------------------------LFDQMVERDVVSWSTVI 322
KCG I +A + LFDQM +RD+V+++++I
Sbjct: 283 AKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLI 342
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
G + G+ +A+ LF +M+R + ++ T + LL+ACA G +G +++ +
Sbjct: 343 TGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQ-RLV 401
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
E I L+D+ + GR+++A + + M ++ D W ++++
Sbjct: 402 EVDIYLGTALLDMYLKCGRVEEASLVFQAMSVR-DVHTWSAMIA 444
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 277/516 (53%), Gaps = 39/516 (7%)
Query: 22 QSCENL---IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVF 78
QSC L + IH +K L + ++D+ GD+ A L F+ + +V
Sbjct: 252 QSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVI 311
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
L + MI Y ++ A L+ +++R S +LP++++L V+++C ++ GKQ
Sbjct: 312 LLSFMISRYAQSNQNEQAFELFLRLMR-----SSVLPNEYSLSSVLQACTNMVQLDFGKQ 366
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
IH H K G +S NAL+D Y KC+++ + K+F + D + V+WN ++ G+++ G
Sbjct: 367 IHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSG- 425
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
+G EAL VF +MQ + +++ SVL A
Sbjct: 426 ----------------------------LGE--EALSVFCEMQAAQMPCTQVTYSSVLRA 455
Query: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318
CA S+ IH +K+ TVI N+LI+ Y KCG I A ++F ++ERD++SW
Sbjct: 456 CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISW 515
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ +I G A HG+A A+ LF M + V NDITF+ LLS C TG N GL FDSM+
Sbjct: 516 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRI 575
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
DH I+ +EHY C+V LLGRAGRL+ AL I ++P P A +W +LLSSC + N+ +
Sbjct: 576 DHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 635
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
+ E +L +EP+D YVLLSN+YA G + V+ +RK +R+ ++K PG S +E+ E+
Sbjct: 636 FSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEI 695
Query: 499 QEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI 534
F G P ++ I +LE L L R + DI
Sbjct: 696 HAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDI 731
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 141/372 (37%), Gaps = 68/372 (18%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
F ++++ G LA A LF ++ E N+ + +++A+ + A L++++ +
Sbjct: 97 FCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWE 156
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
++F L ++K + L +H+ K G ++ + L+D Y C
Sbjct: 157 GHE-----VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCS 211
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ +A VF + +D V WTAM+S Y+
Sbjct: 212 LVSDAEHVFNGIVRKDAVV-------------------------------WTAMVSCYSE 240
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
A + ++ I +CA+ G IH K +
Sbjct: 241 NDCPENAFRCAQSCSLLAI------------SCARQG-------IHGCAIKTLNDTEPHV 281
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
AL++MY KCG I A F+ + DV+ S +I A + +A LF + R V
Sbjct: 282 GGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSV 341
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG------CLVDLLGRAG 400
PN+ + +L AC + ++ D K+ H+ KI H L+D +
Sbjct: 342 LPNEYSLSSVLQACTN-------MVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN 394
Query: 401 RLDQALNIIEEM 412
+D +L I +
Sbjct: 395 DMDSSLKIFSSL 406
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 92/226 (40%), Gaps = 34/226 (15%)
Query: 102 QMLRDPRTGSLILP-----DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
Q L D T ILP D F ++ C G+ +H HV + G
Sbjct: 39 QWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRG--------- 89
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
+ D+ N L++ Y +LG + AR LFD+MP +VS
Sbjct: 90 --------------------GVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVS 129
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCD 276
+ ++ + G + A +FR+++ G E ++ + ++L + + L +H
Sbjct: 130 FVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW 189
Query: 277 KNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
K + + LI+ Y C ++ A +F+ +V +D V W+ ++
Sbjct: 190 KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 227 IGSYAEALDVFR-QMQMVGIEP-----DEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
+YA AL ++ + I P D + L C G G +H H+
Sbjct: 31 FAAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVH-----GHV 85
Query: 281 LRRTVI-------CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHK 333
+RR + N L+ MY K G + A +LFD+M ER++VS+ T++ A G
Sbjct: 86 VRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEA 145
Query: 334 AIHLFHEMQ 342
A LF ++
Sbjct: 146 AAALFRRLR 154
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/491 (36%), Positives = 281/491 (57%), Gaps = 19/491 (3%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI+ G + A LF+ + E NV +N +I A+ A L+ +M
Sbjct: 166 MIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRM-------- 217
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
P++ + + AGL K ++ + ++ N ++ Y + L EA
Sbjct: 218 ---PERDVISWTTM-VAGLSKNGRIDDARLLFDKMPVR-NVVSWNTMIIGYAQNMRLDEA 272
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
K+FE+M +R++ +WN +I+G+ + G++++A F KM +V+WTA+ISG+ G
Sbjct: 273 FKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSE 332
Query: 232 EALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNAL 290
EAL +F +MQ ++P+E + VSVL AC++L +L G+ IH K + +AL
Sbjct: 333 EALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSAL 392
Query: 291 IEMYIKCGCINQASQLFD--QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
I MY KCG + A ++FD + RDVVSW+ +I A+HG HKAI LF EMQ L P
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
+++T+I LLSAC+H G +EGL F+++ RD I+ + +H+ CLVDL GRAGRL +A +
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDF 512
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I+ + +KP A +W +LL+ C + ++++ + E LL EPE+ G Y++LSNIYA G+W
Sbjct: 513 IKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKW 572
Query: 469 EDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
+ + +R ++ K +KK PGCS IEV N V FV GD++ ++I+ LL L +
Sbjct: 573 REAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDL---HTKM 629
Query: 529 KDVIDIMYEDI 539
K + +YED+
Sbjct: 630 KKIGHTLYEDL 640
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 149/292 (51%), Gaps = 23/292 (7%)
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+I + V F S+ N L+ GK ++ EA +VFEEM DRD+V+W +I+GY + G
Sbjct: 52 KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCG 111
Query: 198 QMKKARMLFDKM-PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+++A+ LFD+ +V+WTA++SGY EA +F M + + IS +++
Sbjct: 112 MIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNV----ISWNTMI 167
Query: 257 PACAQLGSLELGEWIHMYCDKNHLL--RRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
A+ G WI D + R V N +I +++ +++A +LF++M ERD
Sbjct: 168 EGYARKG------WIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERD 221
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V+SW+T++ GL+ +G+ A LF +M V + IG A +E F+
Sbjct: 222 VISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGY----AQNMRLDEAFKLFE 277
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
M E ++ + ++ + G+L++A++ +M K + W +++S
Sbjct: 278 QMP-----ERELSSWNTMITGFIQNGKLERAVDFFYKMSNK-NVVTWTAVIS 323
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 147/291 (50%), Gaps = 21/291 (7%)
Query: 153 ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT 212
+T AL+ Y + + + EA ++F+ M +++++WN +I GYAR G + +A LF+ MP
Sbjct: 130 VTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPER 189
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH 272
+VSW +I+ + EA ++F +M E D IS +++ ++ G ++
Sbjct: 190 NVVSWNTVITAFMQRRRVDEAQELFNRMP----ERDVISWTTMVAGLSKNGRIDDA---R 242
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+ DK +R V N +I Y + +++A +LF+QM ER++ SW+T+I G +GK
Sbjct: 243 LLFDK-MPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLE 301
Query: 333 KAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+A+ F++M N +T+ ++S G E L F M+ ++++ + G
Sbjct: 302 RAVDFFYKMSN----KNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVK---PNEGTF 354
Query: 393 VDLLGRAGRL------DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
V +LG +L Q II + + A + +L++ LE+A
Sbjct: 355 VSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELA 405
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 48/349 (13%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
L E K+ Q+ + LS N ++T I G L A F ++ NV + A+I
Sbjct: 269 LDEAFKLFEQMPERELSSWNTMITGFI----QNGKLERAVDFFYKMSNKNVVTWTAVISG 324
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
+ + A+ ++ +M + + + P++ T V+ +C+ L G+QIH + K
Sbjct: 325 HVQDGRSEEALKIFSEM----QAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKT 380
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEE--MTDRDIVAWNNLISGYARLGQMKKARM 204
+ + +AL+++Y KC EL A K+F++ + RD+V+WN +I+ YA G KA
Sbjct: 381 VYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAIS 440
Query: 205 LFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS 264
LFD+M Q +G PD ++ +++L AC+ G
Sbjct: 441 LFDEM-------------------------------QALGFRPDNVTYIALLSACSHAGL 469
Query: 265 LELGEWI--HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTV 321
++ G + ++ D++ LR L++++ + G + +A + V+ W+ +
Sbjct: 470 VDEGLKLFENLVRDRSIKLREDHFT-CLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAAL 528
Query: 322 IGGLANHGKAHKAIHLFHEMQRLKV-PPNDITFIGLLSACAHTGFWNEG 369
+ G HG H + + L+ P N T++ L + A TG W E
Sbjct: 529 LAGCNVHG--HIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREA 575
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 293/538 (54%), Gaps = 47/538 (8%)
Query: 15 DRFV--PILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDV---CNSGGDLAYAS 66
DRF ++ +C N+ L +++H+Q +++ L+ + +I++ C+ G + A
Sbjct: 270 DRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAAR 329
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
+F Q+ + NVF + AMI Y Y A++L++ M+ + ++P+ FT +K
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL-----THVIPNHFTFSSTLK 384
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA L +G+Q+ H K G S + N+L
Sbjct: 385 ACANLAALRIGEQVFTHAVKLGFSSVNCVANSL--------------------------- 417
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
IS YAR G++ AR FD + ++S+ +I Y + EAL++F +++ G+
Sbjct: 418 ----ISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGM 473
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+ S+L A +G++ GE IH K+ L +CNALI MY +CG I A Q
Sbjct: 474 GASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQ 533
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+F+ M +R+V+SW+++I G A HG A +A+ LFH+M V PN +T+I +LSAC+H G
Sbjct: 534 VFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGL 593
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
NEG +F SM +H + ++EHY C+VD+LGR+G L +A+ I MP K DA +W + L
Sbjct: 594 VNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFL 653
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
+CR + NLE+ A + ++ EP D Y+LLSN+YA +W++VS +RK ++ K++ K
Sbjct: 654 GACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIK 713
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV--IDIMYEDIGE 541
GCS +EV N+V +F GD + P +I+ L+ L++ + V +D + D+ E
Sbjct: 714 EAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEE 771
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 182/378 (48%), Gaps = 39/378 (10%)
Query: 52 MIDVCNSG-GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTG 110
+ID+ G GDL A +F+++ E N + MI G AI+L+ +M+
Sbjct: 210 LIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMIL----- 264
Query: 111 SLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIE 170
S PD+FTL VI +CA + LG+Q+H+ + GL L+++Y KC
Sbjct: 265 SGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCS---- 320
Query: 171 AHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
D G M AR +FD++ + SWTAMI+GY G Y
Sbjct: 321 --------VD----------------GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGY 356
Query: 231 -AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA 289
EALD+FR M + + P+ + S L ACA L +L +GE + + K + N+
Sbjct: 357 DEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANS 416
Query: 290 LIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPN 349
LI MY + G I+ A + FD + E++++S++TVI A + + +A+ LF+E++ + +
Sbjct: 417 LISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGAS 476
Query: 350 DITFIGLLSACAHTGFWNEG-LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
TF LLS A G +G ++ +K + + L+ + R G ++ A +
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV--CNALISMYSRCGNIESAFQV 534
Query: 409 IEEMPMKPDAKIWGSLLS 426
E+M + + W S+++
Sbjct: 535 FEDMEDR-NVISWTSIIT 551
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 192/459 (41%), Gaps = 81/459 (17%)
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
L F PN L +I+ N L+ AI+ + M+ PD T +K
Sbjct: 23 LQFPTFTNPNP-LTGRLIQEINNGRLHK-AISTLEHMVHQGSH-----PDLQTYSLFLKK 75
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM-TDRDIVA 185
C +G +H + + L+ S+T N+L+ LY KC + +A +F+ M + RD+++
Sbjct: 76 CIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLIS 135
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W+ ++S +A + M + ++++ MI G
Sbjct: 136 WSAMVSCFAN-----------NNMGFRALLTFVDMIEN--------------------GY 164
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN-ALIEMYIKC-GCINQA 303
P+E + AC+ + +G+ I + K L+ V LI+M++K G + A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-- 361
++F++M ER+ V+W+ +I L G A +AI LF EM P+ T G++SACA
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM 284
Query: 362 ---------HTGFWNEGL------------MYFD-----SMKR-----DHHIEHKIEHYG 390
H+ GL MY SM D ++H + +
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344
Query: 391 CLVD-LLGRAGRLDQALNIIEEMPMK---PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
++ + + G ++AL++ M + P+ + S L +C + L I H +
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK 404
Query: 447 LEPEDTGNYVL--LSNIYAKHGRWEDVSRMRKLIRSKSM 483
L N V L ++YA+ GR +D + ++ K++
Sbjct: 405 LGFSSV-NCVANSLISMYARSGRIDDARKAFDILFEKNL 442
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/498 (35%), Positives = 276/498 (55%), Gaps = 37/498 (7%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
K +H +ILK F ++++ L AS LF ++ E N + +I+ Y +
Sbjct: 58 KGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAES 117
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ AI L+ ++ R+ +LP++FT V+++CA + +LG QIH HV K GL S
Sbjct: 118 VRFLEAIELFVRLHRE------VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHS 171
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
NAL+D+Y A+ G+M+ + LF + P
Sbjct: 172 DVFVSNALMDVY-------------------------------AKCGRMENSMELFAESP 200
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+ V+W +I G+ +G +AL +F M ++ E++ S L ACA L +LE G
Sbjct: 201 HRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ 260
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
IH K + V+ NALI+MY KCG I A +FD M ++D VSW+ +I G + HG
Sbjct: 261 IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL 320
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+A+ +F +MQ +V P+ +TF+G+LSACA+ G ++G YF SM +DH IE IEHY
Sbjct: 321 GREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYT 380
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C+V LLGR G LD+A+ +I+E+P +P +W +LL +C ++++E+ I+ + +L +EP+
Sbjct: 381 CMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQ 440
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
D +VLLSN+YA RW++V+ +RK ++ K +KK PG S IE V F GD + P
Sbjct: 441 DKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPE 500
Query: 511 LKDIFWLLELLALHQDRA 528
++ I +LE L + +A
Sbjct: 501 VRVINGMLEWLHMKTKKA 518
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 9/296 (3%)
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR----DIVAWNNLI 190
L ++ HV SH+ NAL D K DE + E+ R D+ AWN L+
Sbjct: 23 LTQEFVGHVSPSEFNSHAYA-NALQDCIQK-DEPSRGKGLHCEILKRGGCLDLFAWNILL 80
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+ Y + + A LFD+MP +S+ +I GY + EA+++F ++ + P++
Sbjct: 81 NMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHR-EVLPNQF 139
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+ SVL ACA + L LG IH + K L + NAL+++Y KCG + + +LF +
Sbjct: 140 TFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAES 199
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
R+ V+W+TVI G G KA+ LF M +V ++T+ L ACA GL
Sbjct: 200 PHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGL 259
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
S+ + I L+D+ + G + A ++ ++ K D W +++S
Sbjct: 260 Q-IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMIS 313
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 157/368 (42%), Gaps = 44/368 (11%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +LQ+C + L +IH ++K L F+ ++DV G + + LF +
Sbjct: 141 FASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESP 200
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
N +N +I + A+ L+ ML + + T +++CA L
Sbjct: 201 HRNDVTWNTVIVGHVQLGDGEKALRLFLNMLE-----YRVQATEVTYSSALRACASLAAL 255
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G QIH+ K D+DIV N LI Y
Sbjct: 256 EPGLQIHSLTVKTTF-------------------------------DKDIVVTNALIDMY 284
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G +K AR++FD M VSW AMISGY+ G EAL +F +MQ ++PD+++ V
Sbjct: 285 AKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFV 344
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI-CNALIEMYIKCGCINQASQLFDQM-V 311
VL ACA G L+ G+ ++H + + ++ + + G +++A +L D++
Sbjct: 345 GVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPF 404
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPND-ITFIGLLSACAHTGFWNEGL 370
+ V+ W ++G H + + L++ P D T + L + A W+
Sbjct: 405 QPSVMVWRALLGACVIHNDIE--LGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVA 462
Query: 371 MYFDSMKR 378
+MKR
Sbjct: 463 SVRKNMKR 470
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 277/472 (58%), Gaps = 12/472 (2%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFT 119
DL A L + + + +NAMI Y + Y A +L ++M SL I D++T
Sbjct: 223 DLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRM------HSLGIQLDEYT 276
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLK--SHSI--TENALLDLYGKCDELIEAHKVF 175
VI + + ++G+Q+HA+V + ++ H + NAL+ LY +C +L+EA +VF
Sbjct: 277 YTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVF 336
Query: 176 EEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALD 235
++M +D+V+WN ++SG ++++A +F +MP ++++WT MISG G E L
Sbjct: 337 DKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLK 396
Query: 236 VFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYI 295
+F QM++ G+EP + + + +C+ LGSL+ G+ +H + + NALI MY
Sbjct: 397 LFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYS 456
Query: 296 KCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIG 355
+CG + A +F M D VSW+ +I LA HG +AI L+ +M + + P+ ITF+
Sbjct: 457 RCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLT 516
Query: 356 LLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+LSAC+H G EG YFD+M+ + I + +HY L+DLL RAG +A N+ E MP +
Sbjct: 517 ILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFE 576
Query: 416 PDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMR 475
P A IW +LL+ C + N+E+ + A + LL L P+ G Y+ LSN+YA G+W++V+R+R
Sbjct: 577 PGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVR 636
Query: 476 KLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
KL+R + +KK PGCS IEV N V F+ D P + ++ LE L +H+ R
Sbjct: 637 KLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQL-VHEMR 687
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 174/351 (49%), Gaps = 37/351 (10%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEP--NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDP 107
T M+ ++ G++ A LF + YNAMI A++++H A+ L+ QM
Sbjct: 66 TTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQM---K 122
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLG-KQIHAHVCKFGLKSHSITENALLDLYGKCD 166
R G +PD FT V+ + + + +Q+H V K+G S NAL+ Y C
Sbjct: 123 RLG--FVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180
Query: 167 E---------LIEAHKVFEEMTD--RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
+ A K+F+E RD AW +I+GY R + AR L + M V
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAV 240
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
+W AMISGY H G Y EA D+ R+M +GI+ DE + SV+ A + G +G +H Y
Sbjct: 241 AWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAY- 299
Query: 276 DKNHLLRRTV---------ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
+LR V + NALI +Y +CG + +A ++FD+M +D+VSW+ ++ G
Sbjct: 300 ----VLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCV 355
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
N + +A +F EM + +T+ ++S A GF EGL F+ MK
Sbjct: 356 NARRIEEANSIFREMPVRSL----LTWTVMISGLAQNGFGEEGLKLFNQMK 402
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 153/354 (43%), Gaps = 53/354 (14%)
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S + +HAH+ G K + N L+D Y K + A +F+++ DIVA ++S Y
Sbjct: 13 SFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAY 72
Query: 194 ARLGQMKKARMLFDKMPYTT--IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
+ G +K A LF+ P + VS+ AMI+ ++H AL +F QM+ +G PD +
Sbjct: 73 SAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFT 132
Query: 252 IVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCG-------CI--N 301
SVL A + + E + +H K L + NAL+ Y+ C C+
Sbjct: 133 FSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMA 192
Query: 302 QASQLFDQ---------------------------------MVERDVVSWSTVIGGLANH 328
A +LFD+ M + V+W+ +I G +
Sbjct: 193 AARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHR 252
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G +A L M L + ++ T+ ++SA ++ G +N G + R + H
Sbjct: 253 GFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRT--VVQPSGH 310
Query: 389 Y-----GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ L+ L R G+L +A + ++MP+K D W ++LS C +E A
Sbjct: 311 FVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGCVNARRIEEA 363
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 34/271 (12%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ + SC L L +++H+QI++ S + +I + + G + A +F +
Sbjct: 413 YAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMP 472
Query: 74 EPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFTLPFVIKSC--AGL 130
+ +NAMI A H +G+ AI LY++ML++ ILPD+ T ++ +C AGL
Sbjct: 473 YVDSVSWNAMIAALAQ-HGHGVQAIQLYEKMLKED-----ILPDRITFLTILSACSHAGL 526
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNL 189
+ VC +G+ + L+DL + EA V E M + W L
Sbjct: 527 VKEGRHYFDTMRVC-YGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEAL 585
Query: 190 ISGYARLGQM----KKARMLFDKMPYT--TIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
++G G M + A L + MP T +S + M Y +G + E V + M+
Sbjct: 586 LAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNM---YAALGQWDEVARVRKLMRER 642
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
G++ + P C+ +E+ +H++
Sbjct: 643 GVKKE--------PGCSW---IEVENMVHVF 662
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 277/505 (54%), Gaps = 36/505 (7%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+P L L + K++H I++ + FLV+ ++D+ D+ A L+ + +
Sbjct: 349 LLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAID 408
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V + + +I Y N + A+ +++ +L I P+ T+ V+ +CA + LG
Sbjct: 409 VVIGSTVISGYVLNGMSEKALQMFRYLLEQ-----CIKPNAVTVASVLPACASISALPLG 463
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
++IH +V + + E+AL+D+Y KC
Sbjct: 464 QEIHGYVLRNAYEGKCYVESALMDMYAKC------------------------------- 492
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G++ + +F KM V+W +MIS ++ G EALD+FRQM M GI+ + ++I S L
Sbjct: 493 GRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSAL 552
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA L ++ G+ IH K + +ALI+MY KCG + A ++F+ M +++ V
Sbjct: 553 SACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEV 612
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+++I HG +++ H MQ P+ +TF+ L+SACAH G EGL F M
Sbjct: 613 SWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCM 672
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+++ I ++EH+ C+VDL R+GRLD+A+ I +MP KPDA IWG+LL +CR + N+E+
Sbjct: 673 TKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVEL 732
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A IA + L L+P ++G YVL+SNI A GRW+ VS++R+L++ + K PG S ++VNN
Sbjct: 733 ADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNN 792
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELL 521
FV+ D + P +DI+ L+ L
Sbjct: 793 SSHLFVASDKSHPESEDIYTSLKAL 817
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F+ + + +L+ ++H+ +K L Q + ++ + L A LF+ + +
Sbjct: 248 FLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDD 307
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +N MI N L A+ L+ MLR S PD TL ++ + L G
Sbjct: 308 LVTWNGMISGCVQNGLLDEALGLFCDMLR-----SGARPDSVTLVSLLPALTDLNGLKQG 362
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K++H ++ + + + +AL+D+Y KC RD+
Sbjct: 363 KEVHGYIIRNCVHMDAFLVSALVDIYFKC---------------RDV------------- 394
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+ AR L+D +V + +ISGY G +AL +FR + I+P+ +++ SVL
Sbjct: 395 ---RTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVL 451
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
PACA + +L LG+ IH Y +N + + +AL++MY KCG ++ + +F +M +D V
Sbjct: 452 PACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEV 511
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-----HTGFWNEGLM 371
+W+++I + +G+ +A+ LF +M + N++T LSACA + G G++
Sbjct: 512 TWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVI 571
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+K D E L+D+ + G ++ AL + E MP K + W S++S+
Sbjct: 572 IKGPIKADIFAE------SALIDMYAKCGNMELALRVFEFMPDKNEVS-WNSIISA 620
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 159/354 (44%), Gaps = 43/354 (12%)
Query: 15 DRFVPILQSCENLIELK---KIHTQ-ILKYLLSQSNFLV--TKMIDVCNSGGDLAYASLL 68
DR + +L+ C + L +IH + ++ LS N L T+++ + A +
Sbjct: 33 DRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAV 92
Query: 69 FKQVKEP---NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
F + + +N +IR +T + LA+ Y +M P S PD TLP+V+K
Sbjct: 93 FSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPS---PDAHTLPYVVK 149
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
SCA L SLG+ +H GL S D+
Sbjct: 150 SCAALGAVSLGRLVHRTARATGLAS-------------------------------DVYV 178
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
+ LI Y+ G ++ AR FD MP+ V W M+ GY G A+ +FR M++ G
Sbjct: 179 GSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGC 238
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
EP+ ++ L CA L G +H K L + + N L+ MY KC C++ A +
Sbjct: 239 EPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWR 298
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
LF+ + D+V+W+ +I G +G +A+ LF +M R P+ +T + LL A
Sbjct: 299 LFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPA 352
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 7/247 (2%)
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVS---WTAMISGYTHIGSYAEALDVFRQM--Q 241
L+ Y + + A +F +P S W +I G+T G ++ A+ + +M
Sbjct: 74 TRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTH 133
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
PD ++ V+ +CA LG++ LG +H L + +ALI+MY G +
Sbjct: 134 PAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLR 193
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
A FD M RD V W+ ++ G G A+ LF M+ PN T LS CA
Sbjct: 194 DARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCA 253
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
G+ S+ +E ++ L+ + + LD A + E +P + D W
Sbjct: 254 AEADLLSGVQ-LHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLP-RDDLVTW 311
Query: 422 GSLLSSC 428
++S C
Sbjct: 312 NGMISGC 318
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 277/483 (57%), Gaps = 42/483 (8%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFL----YNAMIRAYTNNHLYGLAINLYKQMLRDP 107
M+ + G+ A LFK +++ N+ L + A+I Y+ A+NL++QM+
Sbjct: 344 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF-- 401
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL---YGK 164
+GSL P+ T+ V+ +CA L S G +IHA+ K N LL L +G
Sbjct: 402 -SGSL--PNCVTIISVLSACASLGAFSQGTEIHAYSLK----------NCLLTLDNDFGG 448
Query: 165 CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT--TIVSWTAMIS 222
DE D++ +N LI Y++ K AR +FD +P +V+WT MI
Sbjct: 449 EDE--------------DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 494
Query: 223 GYTHIGSYAEALDVFRQM--QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
G+ G +AL +F +M + G+ P+ +I +L ACA L ++ +G+ IH Y ++H
Sbjct: 495 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHR 554
Query: 281 LRRTV--ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLF 338
+ + N LI+MY KCG ++ A +FD M ++ +SW++++ G HG+ +A+ +F
Sbjct: 555 YESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 614
Query: 339 HEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
+M++ P+DITF+ +L AC+H G ++GL YFDSM D+ + + EHY C +DLL R
Sbjct: 615 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLAR 674
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLL 458
+GRLD+A +++MPM+P A +W +LLS+CR +SN+E+A A+ L+ + E+ G+Y L+
Sbjct: 675 SGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLI 734
Query: 459 SNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
SNIYA GRW+DV+R+R L++ +KK PGCS ++ F GD + P I+ LL
Sbjct: 735 SNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALL 794
Query: 519 ELL 521
E L
Sbjct: 795 ESL 797
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 219/440 (49%), Gaps = 41/440 (9%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE-- 74
+L++C L + H I + F+ ++ + + G L AS++F ++ +
Sbjct: 168 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 227
Query: 75 -PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT--------LPFVIK 125
+V +N+++ A+ + A++L+ +M +LI+ +K T + ++
Sbjct: 228 IDDVISWNSIVSAHVKSSNAWTALDLFSKM-------TLIVHEKPTNERSDIISIVNILP 280
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+C L K++H + + G NAL+D Y KC + A KVF M +D+V+
Sbjct: 281 ACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 340
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQ 241
WN +++GY++ G + A LF M I V+WTA+I+GY+ G EAL++FRQM
Sbjct: 341 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 400
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL----------RRTVICNALI 291
G P+ ++I+SVL ACA LG+ G IH Y KN LL ++ NALI
Sbjct: 401 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 460
Query: 292 EMYIKCGCINQASQLFDQ--MVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVP 347
+MY KC A +FD + ER+VV+W+ +IGG A +G ++ A+ LF EM + V
Sbjct: 461 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 520
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-CLVDLLGRAGRLDQAL 406
PN T +L ACAH G + R H E CL+D+ + G +D A
Sbjct: 521 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTAR 580
Query: 407 NIIEEMPMKPDAKIWGSLLS 426
++ + M K A W S+++
Sbjct: 581 HVFDSMSQK-SAISWTSMMT 599
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 207/487 (42%), Gaps = 109/487 (22%)
Query: 2 AARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKY---------------LLSQSN 46
AR + + F +L+ C++ + +IH QI+ L
Sbjct: 32 GARAACIGVDVYPSHFASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEP 91
Query: 47 F-----LVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYK 101
F L T ++ + G YA L+ ++V +N +IR + AIN+
Sbjct: 92 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151
Query: 102 QMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL 161
+MLR + PD FTLP V+K+C L G H +C G +S+ NAL+ +
Sbjct: 152 RMLR-----AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 206
Query: 162 YGKCDELIEAHKVFEEMTDR---DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWT 218
Y +C L EA +F+E+T R D+++WN+++S + + +WT
Sbjct: 207 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSN-----------------AWT 249
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIE------PDEISIVSVLPACAQLGSLELGEWIH 272
ALD+F +M ++ E D ISIV++LPAC L ++ + +H
Sbjct: 250 --------------ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVH 295
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+N + NALI+ Y KCG + A ++F+ M +DVVSW+ ++ G + G
Sbjct: 296 GNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFE 355
Query: 333 KAIHLFHEMQRLKVP-----------------------------------PNDITFIGLL 357
A LF M++ +P PN +T I +L
Sbjct: 356 AAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVL 415
Query: 358 SACAHTGFWNEGL-MYFDSMKR-----DHHIEHKIEH---YGCLVDLLGRAGRLDQALNI 408
SACA G +++G ++ S+K D+ + E Y L+D+ + A +I
Sbjct: 416 SACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSI 475
Query: 409 IEEMPMK 415
+++P++
Sbjct: 476 FDDIPLE 482
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 157/365 (43%), Gaps = 26/365 (7%)
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
+++ Y G A ++ +++ + V W +I + G A++V +M G
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD ++ VL AC +L S G H N ICNAL+ MY +CG + +AS +
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 307 FDQMVER---DVVSWSTVIGGLANHGKAHKAIHLFHEMQRL--KVPPND----ITFIGLL 357
FD++ +R DV+SW++++ A A+ LF +M + + P N+ I+ + +L
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 279
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
AC + + R+ + L+D + G ++ A+ + M K D
Sbjct: 280 PACGSLKAVPQTKEVHGNAIRNGTFP-DVFVGNALIDAYAKCGLMENAVKVFNMMEFK-D 337
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE-PEDTGNYVLLSNIYAKHG-RWEDVSRMR 475
W ++++ N E A +++ P D + + Y++ G E ++ R
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397
Query: 476 KLIRSKSMKKTPGC----SLIEVNNEVQEFVSGDDTKPF-LKDIFWLLELLALHQDRAKD 530
++I S S+ P C S++ + F G + + LK+ LL L D +
Sbjct: 398 QMIFSGSL---PNCVTIISVLSACASLGAFSQGTEIHAYSLKNC-----LLTLDNDFGGE 449
Query: 531 VIDIM 535
D+M
Sbjct: 450 DEDLM 454
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 105/238 (44%), Gaps = 17/238 (7%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSN--FLVTKMIDVCNSGGDLAYASLLFKQVKE 74
IL +C +L + K+IH +L++ +S+ F+ +ID+ + GD+ A +F + +
Sbjct: 529 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 588
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--GLLC 132
+ + +M+ Y + A++++ +M + + +PD T V+ +C+ G++
Sbjct: 589 KSAISWTSMMTGYGMHGRGSEALDIFDKMRK-----AGFVPDDITFLVVLYACSHCGMVD 643
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
L + +GL + +DL + L +A + ++M + V W L+S
Sbjct: 644 QGL-SYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 702
Query: 192 GYARLGQMKKARMLFDK---MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
++ A +K M S+T + + Y G + + + M+ GI+
Sbjct: 703 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIK 760
>gi|334183024|ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g34160
gi|332193557|gb|AEE31678.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 297/529 (56%), Gaps = 44/529 (8%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
++Q C + ++K++ + L QS+FL +++++ C + GDL++A +F+ + +P
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLT 68
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP-DKFTLPFVIKSCAGLLCPSLG 136
+NA+IR + + LA + Y+ ML+ + S I D T F +K+CA LC S
Sbjct: 69 NDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
Q+H + + GL + S+ LLD Y K +LI A+K
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK----------------------- 165
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
LFD+MP + SW A+I+G +EA++++++M+ GI E+++V+ L
Sbjct: 166 --------LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAAL 217
Query: 257 PACAQLGSLELGEWI-HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERD 314
AC+ LG ++ GE I H Y + N ++ NA I+MY KCG +++A Q+F+Q ++
Sbjct: 218 GACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKS 272
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VV+W+T+I G A HG+AH+A+ +F +++ + P+D++++ L+AC H G GL F+
Sbjct: 273 VVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFN 332
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+M +E ++HYGC+VDLL RAGRL +A +II M M PD +W SLL + YS++
Sbjct: 333 NMAC-KGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDV 391
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E+A IA + + + G++VLLSN+YA GRW+DV R+R + SK +KK PG S IE
Sbjct: 392 EMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEA 451
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLE--LLALHQDRAKDVIDIMYEDIGE 541
+ EF + D + ++I+ ++ + +D ++ DIGE
Sbjct: 452 KGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGE 500
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 306/592 (51%), Gaps = 78/592 (13%)
Query: 10 IKELEDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS 66
IK E ++ +C L + + IH ++K F ++D+ GDLA A
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
+F+++K+P++ +NA+I + + A+ L QM R S I P+ FTL +K+
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR-----SGICPNIFTLSSALKA 368
Query: 127 CAGLLCPSLGKQIHAHVCKFGLKSHS-------------------------------ITE 155
CAG+ LG+Q+H+ + K ++S I
Sbjct: 369 CAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAW 428
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDR---------------------------------- 181
NA++ Y + E +EA +F EM
Sbjct: 429 NAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVK 488
Query: 182 -----DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
DI N+LI Y + ++ A +F++ +VS+T+MI+ Y G EAL +
Sbjct: 489 SGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKL 548
Query: 237 FRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIK 296
F +MQ + ++PD S+L ACA L + E G+ +H++ K + N+L+ MY K
Sbjct: 549 FLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAK 608
Query: 297 CGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
CG I+ A + F ++ ER +VSWS +IGGLA HG +A+ LF++M + V PN IT + +
Sbjct: 609 CGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSV 668
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
L AC H G E +YF+SM+ + EHY C++DLLGRAG++++A+ ++ +MP +
Sbjct: 669 LGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEA 728
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
+A +WG+LL + R + ++E+ A E L +LEPE +G +VLL+NIYA G+WE+V+ +R+
Sbjct: 729 NASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRR 788
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
L+R +KK PG S IEV ++V F+ GD + ++I+ L+ L+ D+A
Sbjct: 789 LMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKA 840
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 183/402 (45%), Gaps = 42/402 (10%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
+IH I K LS + +I++ + + YA L + EP++ ++A+I Y N
Sbjct: 77 QIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNG 136
Query: 92 LYGLAINLYKQM-LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
L G A+ + +M L + ++FT V+K+C+ + +GKQ+H V G +
Sbjct: 137 LGGGALMAFHEMHLLGVKC------NEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEG 190
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
N L+ +Y KC +E D ++ LFD++P
Sbjct: 191 DVFVANTLVVMYAKC----------DEFLD---------------------SKRLFDEIP 219
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+VSW A+ S Y I EA+ +F +M + GI+P+E S+ S++ AC L G+
Sbjct: 220 ERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKI 279
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
IH Y K NAL++MY K G + A +F+++ + D+VSW+ VI G H
Sbjct: 280 IHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEH 339
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS-MKRDHHIEHKIEHY 389
+A+ L +M+R + PN T L ACA G G S MK D +E +
Sbjct: 340 HEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMD--MESDLFVS 397
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
LVD+ + L+ A +P K D W +++S Y
Sbjct: 398 VGLVDMYSKCDLLEDARMAFNLLPEK-DLIAWNAIISGYSQY 438
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 158/356 (44%), Gaps = 53/356 (14%)
Query: 97 INLYKQMLRDPRTGSLI--------LPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGL 148
I Q +DP+T +++ P + ++ C G QIHAH+ K GL
Sbjct: 28 IQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGL 87
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
N L++LY KC A K+ +E ++ D+V+W+ LISGYA+ G A M
Sbjct: 88 SDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALM---- 143
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
F +M ++G++ +E + SVL AC+ + L +G
Sbjct: 144 ---------------------------AFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIG 176
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+ +H + + N L+ MY KC + +LFD++ ER+VVSW+ +
Sbjct: 177 KQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQI 236
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
+A+ LF+EM + PN+ + +++AC GL K H K+ +
Sbjct: 237 DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT-------GLRDSSRGKIIHGYLIKLGY 289
Query: 389 ------YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
LVD+ + G L A+++ E++ +PD W ++++ C + + E A+
Sbjct: 290 DWDPFSANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHEQAL 344
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 277/505 (54%), Gaps = 36/505 (7%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+P L L + K++H I++ ++ FLV+ ++D+ D+ A L+ + +
Sbjct: 349 LLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAID 408
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V + + MI Y N + A+ +++ +L I P+ T+ V+ CA + LG
Sbjct: 409 VVIGSTMISGYVLNGMSEEALQMFRYLLEQ-----CIKPNAVTIASVLPGCASMAALPLG 463
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+QIH +V + + E+AL+D+Y KC
Sbjct: 464 QQIHGYVLRNAYERKCYVESALMDMYAKC------------------------------- 492
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G++ + +F KM V+W +MIS ++ G EALD+FRQM M GI+ + I+I + L
Sbjct: 493 GRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAAL 552
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA L ++ G+ IH K + +ALI+MY KCG + A ++F+ M +++ V
Sbjct: 553 SACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEV 612
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+++I HG +++ L H MQ P+ +TF+ L+SACAH G EG+ F M
Sbjct: 613 SWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCM 672
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
+ + I ++EH+ C+VDL R+G+LD+A+ I +MP KPDA IWG+LL +CR + N+E+
Sbjct: 673 TKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVEL 732
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
A IA + L L+P ++G YVL+SNI A GRW+ VS++R+L++ + K PG S ++VNN
Sbjct: 733 ADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNN 792
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELL 521
FV+ D + P +DI+ L+ L
Sbjct: 793 SSHLFVASDKSHPESEDIYTSLKTL 817
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 196/416 (47%), Gaps = 48/416 (11%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F+ + + +L+ ++H+ +K L + ++ + L A LF+ + + +
Sbjct: 248 FLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDD 307
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +N MI N L+ A L+ M R S PD TL ++ + L G
Sbjct: 308 LVTWNGMISGCVQNGLFVEAFGLFYDMQR-----SGARPDSITLVSLLPALTDLNGLKQG 362
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K++H ++ + + +AL+D+Y KC RD+
Sbjct: 363 KEVHGYIVRNCVNMDVFLVSALVDIYFKC---------------RDV------------- 394
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
+ A+ L+D +V + MISGY G EAL +FR + I+P+ ++I SVL
Sbjct: 395 ---RMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVL 451
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
P CA + +L LG+ IH Y +N R+ + +AL++MY KCG ++ + +F +M ++D V
Sbjct: 452 PGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEV 511
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-----HTGFWNEGLM 371
+W+++I + +GK +A+ LF +M + N+IT LSACA + G G+
Sbjct: 512 TWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVT 571
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+K D E L+D+ + G L+ AL + E MP K + W S++S+
Sbjct: 572 IKGPIKADIFAE------SALIDMYAKCGNLELALRVFEFMPDKNEVS-WNSIISA 620
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 156/354 (44%), Gaps = 43/354 (12%)
Query: 15 DRFVPILQSCENLIELK---KIHTQ-ILKYLLSQSNFLV--TKMIDVCNSGGDLAYASLL 68
DR + +L+ C + L +IH + ++ LS N L T+++ + A +
Sbjct: 33 DRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAV 92
Query: 69 FK---QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
F + + +N +IR +T + LA+ Y +M P S PD TLP+V+K
Sbjct: 93 FSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPS---PDAHTLPYVVK 149
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
SCA L SLG+ +H GL + D+
Sbjct: 150 SCAALGAMSLGRLVHRTARAIGLAN-------------------------------DVYV 178
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
+ L+ YA G + AR FD +P V W M+ G G A+ +FR M+ G
Sbjct: 179 GSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGC 238
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
EP+ ++ L CA L G +H K L + N L+ MY KC C++ A +
Sbjct: 239 EPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWR 298
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
LF+ M + D+V+W+ +I G +G +A LF++MQR P+ IT + LL A
Sbjct: 299 LFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPA 352
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 7/247 (2%)
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVS---WTAMISGYTHIGSYAEALDVFRQM--Q 241
L+ Y + + A +F +P S W +I G+T G + A+ + +M
Sbjct: 74 TRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSH 133
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
PD ++ V+ +CA LG++ LG +H L + +AL++MY G +
Sbjct: 134 PAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLG 193
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
A FD + ERD V W+ ++ G G A+ LF M+ PN T LS CA
Sbjct: 194 NARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCA 253
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
G S+ +E ++ L+ + + LD A + E MP + D W
Sbjct: 254 TDADLLSGAQ-LHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMP-QDDLVTW 311
Query: 422 GSLLSSC 428
++S C
Sbjct: 312 NGMISGC 318
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 300/575 (52%), Gaps = 75/575 (13%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+ + E+ ++ +KIH ++K F ++D+ G L AS +F ++ +P++
Sbjct: 118 INVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDI 177
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+NA+I + + A+ L ++M + S + P+ FTL +K+CAG+ LG+
Sbjct: 178 VSWNAIIAGCVLHEYHHRALELLREMNK-----SGMCPNMFTLSSALKACAGMALRELGR 232
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
Q+H+ + K + S S L+D+Y KC+ + +A VF+ M +RD++AWN +ISG+++
Sbjct: 233 QLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNE 292
Query: 198 QMKKARML----------FDKMPYTTIVSWTA---------------------------- 219
+ ++A L F++ +T++ A
Sbjct: 293 EDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVN 352
Query: 220 -MISGYTHIGSYAEALDVFRQMQMV-------------------------------GIEP 247
+I Y G +A VF + +V GI+P
Sbjct: 353 SLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKP 412
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D S+L ACA L + E G+ +H++ K + N+L+ MY KCG I AS F
Sbjct: 413 DSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAF 472
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
++ R +VSWS +IGGLA HG +A+ LF +M ++ VPPN IT + +L AC H G
Sbjct: 473 SRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVA 532
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
E YF+SMK IE EHY C++DLLGRAG+L+ A+ ++ +MP + +A +WG+LL +
Sbjct: 533 EAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGA 592
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
R + N+++ A E LL LEPE +G +VLL+NIYA G W+ V+R+R+L++ +KK P
Sbjct: 593 ARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEP 652
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
G S +EV ++V F+ GD + +I+ L+ L+
Sbjct: 653 GMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELS 687
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 224/506 (44%), Gaps = 81/506 (16%)
Query: 8 LSIKELEDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
L IK E F +L++C ++L+ K++H ++ F+ ++ + G
Sbjct: 4 LGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGD 63
Query: 65 ASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI 124
A LF + + +V +NA+ Y ++ ++G A++L+ M+ S I P++F+L +I
Sbjct: 64 ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVL-----SGIRPNEFSLSSMI 118
Query: 125 KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIV 184
C GL G++IH ++ K G S + + NAL+D+
Sbjct: 119 NVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDM----------------------- 155
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
YA++G ++ A +FD++ IVSW A+I+G + AL++ R+M G
Sbjct: 156 --------YAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSG 207
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ P+ ++ S L ACA + ELG +H K + + + LI+MY KC ++ A
Sbjct: 208 MCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDAR 267
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL-SACAHT 363
+F M ERD+++W+ VI G + + + +A LF M + N T +L S A
Sbjct: 268 LVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQ 327
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP---------- 413
+ ++ S+K ++ + L+D G+ G ++ A + EE P
Sbjct: 328 ANYMCRQIHALSLKSGFEFDNYV--VNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSL 385
Query: 414 ------------------------MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL---V 446
+KPD+ + SLL++C + S E H+L
Sbjct: 386 VTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGF 445
Query: 447 LEPEDTGNYVLLSNIYAKHGRWEDVS 472
+ GN L N+YAK G ED S
Sbjct: 446 MSDIFAGNS--LVNMYAKCGSIEDAS 469
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 14/195 (7%)
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M ++GI+ +E + SVL AC L LG+ +H + N+L+ +Y KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
A LFD + +R VVSW+ + + +A+ LFH+M + PN+ + +++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEH------YGCLVDLLGRAGRLDQALNIIEEMP 413
C GL ++ H K+ + LVD+ + G L+ A ++ +E+
Sbjct: 121 CT-------GLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA 173
Query: 414 MKPDAKIWGSLLSSC 428
KPD W ++++ C
Sbjct: 174 -KPDIVSWNAIIAGC 187
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 287/538 (53%), Gaps = 42/538 (7%)
Query: 41 LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLY 100
+L + F ++ G + F ++ + YN I ++ N ++ L+
Sbjct: 84 MLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143
Query: 101 KQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLD 160
K+M R+ P ++T+ ++ + A L GKQIH + + NAL D
Sbjct: 144 KRMQREG-----FEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTD 198
Query: 161 LYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK------------------- 201
+Y KC E+ +A +F+ +T +++V+WN +ISGYA+ GQ +K
Sbjct: 199 MYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVT 258
Query: 202 ----------------ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
AR +F + IV WTAM+ GY G +AL +F +M + I
Sbjct: 259 MSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHI 318
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
EPD ++ SV+ +CA+L SL G+ +H L ++ +ALI+MY KCG I+ A
Sbjct: 319 EPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARS 378
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF 365
+F+ M R+VVSW+ +I G A +G A+ LF M + K P+++TFIG+LSAC H +
Sbjct: 379 VFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNW 438
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+G YFDS+ H + ++HY C+V+LLGR GR++QA+ +I+ M PD IW +LL
Sbjct: 439 IEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498
Query: 426 SSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKK 485
S C T ++ A +A HL L+P Y++LSN+YA GRW+DV+ +R L++SK++KK
Sbjct: 499 SICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKK 558
Query: 486 TPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL--ALHQDRAKDVIDIMYEDIGE 541
G S IE++NEV F S D T P +DI+ L +L L ++ +++ D+GE
Sbjct: 559 FAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGE 616
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 158/288 (54%), Gaps = 8/288 (2%)
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
+ S N LL LY K +L +A +F++M RDI +WN L+S YA+ G ++ + FD+M
Sbjct: 56 TDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRM 115
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P+ VS+ I+G++ E+L++F++MQ G EP E +IVS+L A AQL L G+
Sbjct: 116 PFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGK 175
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
IH + L I NAL +MY KCG I QA LFD + ++++VSW+ +I G A +G
Sbjct: 176 QIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNG 235
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+ K I L H+M+ P+ +T +++A G +E F K E I +
Sbjct: 236 QPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFK-----EKDIVCW 290
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPM---KPDAKIWGSLLSSCRTYSNL 434
++ + GR + AL + EM + +PD+ S++SSC ++L
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASL 338
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 280/492 (56%), Gaps = 40/492 (8%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +LQSC + L K++H Q ++ + L TK++ + L A LF ++
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ N+FL+N +IR Y N + AI LY +ML + PD FTLPFV+K+C+ L
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYG-----LRPDNFTLPFVLKACSALSAI 164
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+ IH +V K G +RD+ LI Y
Sbjct: 165 GEGRSIHEYVIKSGW-------------------------------ERDLFVGAALIDMY 193
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G + A +FDK+ V W +M++ Y G E++ + R+M G+ P E ++V
Sbjct: 194 AKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLV 253
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+V+ + A + L G IH + ++ + ALI+MY KCG + A LF+++ E+
Sbjct: 254 TVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREK 313
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
VVSW+ +I G A HG A A+ LF +M++ + P+ ITF+G+L+AC+ +EG +
Sbjct: 314 RVVSWNAIITGYAMHGLAVGALDLFDKMRK-EDRPDHITFVGVLAACSRGRLLDEGRALY 372
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ M RD+ I ++HY C++DLLG G+LD+A ++I M +KPD+ +WG+LL+SC+ + N
Sbjct: 373 NLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGN 432
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A +A+E L+ LEP+D+GNYV+L+N+YA+ G+WE V ++R+++ K +KK CS IE
Sbjct: 433 VELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIE 492
Query: 494 VNNEVQEFVSGD 505
V N+V F++GD
Sbjct: 493 VKNKVYAFLAGD 504
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 274/520 (52%), Gaps = 39/520 (7%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V +L + +L L+ IH + + T M+D G + A L+FK +
Sbjct: 246 LVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMS 305
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
NV +N MI Y N A + +ML + + P ++ + +CA L
Sbjct: 306 SRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEG-----VEPTNVSMMGALHACANLGDL 360
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+ +H LLD E+ D+ N+LIS Y
Sbjct: 361 ERGRYVHR----------------LLD---------------EKKIGFDVSVMNSLISMY 389
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
++ ++ A +F + + T+V+W AMI GY G EAL++F +MQ I+PD ++V
Sbjct: 390 SKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLV 449
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV+ A A L +WIH + + + +C ALI+ + KCG I A +LFD M ER
Sbjct: 450 SVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQER 509
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
V++W+ +I G +G +A+ LF+EMQ V PN+ITF+ +++AC+H+G EG+ YF
Sbjct: 510 HVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYF 569
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SMK ++ +E ++HYG +VDLLGRAGRLD A I++MP+KP + G++L +CR + N
Sbjct: 570 ESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKN 629
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+ + L L+P+D G +VLL+N+YA W+ V+R+R + K ++KTPGCSL+E
Sbjct: 630 VELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVE 689
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVID 533
+ NEV F SG P K I+ LE L A V D
Sbjct: 690 LRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPD 729
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 192/413 (46%), Gaps = 41/413 (9%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L+ C +L EL +I I+K + TK+I + + A+ +F+ V+ L
Sbjct: 50 LLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVL 109
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
Y+ M++ Y N A+ Y++M D ++P + ++++ L G++I
Sbjct: 110 YHTMLKGYAKNSTLRDAVRFYERMRCDE-----VMPVVYDFTYLLQLSGENLDLRRGREI 164
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H V G +S+ A+++LY KC ++ +A+K
Sbjct: 165 HGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYK-------------------------- 198
Query: 200 KKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPAC 259
+F++MP +VSW +++GY G A+ V QMQ G +PD I++VSVLPA
Sbjct: 199 -----MFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAV 253
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A L +L +G IH Y + + A+++ Y KCG + A +F M R+VVSW+
Sbjct: 254 ADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWN 313
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
T+I G A +G++ +A F +M V P +++ +G L ACA+ G G Y + +
Sbjct: 314 TMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERG-RYVHRLLDE 372
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP----DAKIWGSLLSSC 428
I + L+ + + R+D A ++ + K +A I G + C
Sbjct: 373 KKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGC 425
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 231/521 (44%), Gaps = 93/521 (17%)
Query: 17 FVPILQ-SCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
F +LQ S ENL +L++ IH ++ + F +T ++++ + A +F+++
Sbjct: 145 FTYLLQLSGENL-DLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERM 203
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+ ++ +N ++ Y N A+ + QM + PD TL V+ + A L
Sbjct: 204 PQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQK-----PDSITLVSVLPAVADLKA 258
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
+G+ IH + + G + A+LD Y KC + A VF+ M+ R++V+WN +I G
Sbjct: 259 LRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDG 318
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
YA+ G+ + EA F +M G+EP +S+
Sbjct: 319 YAQNGESE-------------------------------EAFATFLKMLDEGVEPTNVSM 347
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
+ L ACA LG LE G ++H D+ + + N+LI MY KC ++ A+ +F +
Sbjct: 348 MGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKH 407
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-----HTGFWN 367
+ VV+W+ +I G A +G ++A++LF EMQ + P+ T + +++A A W
Sbjct: 408 KTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWI 467
Query: 368 EGLM------------------------------YFDSMKRDHHIEHKIEHYGCLVDLLG 397
GL FD M+ H I + ++D G
Sbjct: 468 HGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVIT-----WNAMIDGYG 522
Query: 398 RAGRLDQALNIIEEM---PMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL---LVLEPED 451
G +AL++ EM +KP+ + S++++C +E + E + LEP
Sbjct: 523 TNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPT- 581
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
+Y + ++ + GR +D K I+ +K PG +++
Sbjct: 582 MDHYGAMVDLLGRAGRLDDA---WKFIQDMPVK--PGITVL 617
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 248/442 (56%), Gaps = 38/442 (8%)
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
MIR + + + Y MLR+ +LP K + +++SCA LG+ H
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRND-----VLPSKTSFSLILRSCAISGEAQLGEAFHCQ 55
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
+ K G + I + LLD Y A+ G +++A
Sbjct: 56 IMKMGFEYDMILQTGLLDFY-------------------------------AKHGYVEEA 84
Query: 203 RMLFDKMP--YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA 260
R LFD M + V+W MIS Y G + A+ +F+QMQ ++P E+++VS+L ACA
Sbjct: 85 RNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACA 144
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
LG+L++GEWIH Y L V+ NALI+MY KCG + A +F + +++ W++
Sbjct: 145 HLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNS 204
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
+I GL +G+ +AI F M++ + P+ +TF+G+LS C+H+G + G YF M +
Sbjct: 205 IIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVY 264
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
+E +EHYGC+VDLLGRAG L +AL +I MPMKP++ + GSLL +C+ + + ++
Sbjct: 265 GLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQV 324
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQE 500
+ LL L+P D GNYV LSN+YA RW+DV+ RKL+ + + KTPGCS IEVNN V E
Sbjct: 325 TQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHE 384
Query: 501 FVSGDDTKPFLKDIFWLLELLA 522
FV+GD + P I L+ +A
Sbjct: 385 FVAGDTSHPQFTQINAFLDEIA 406
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 15/241 (6%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F IL+SC E + H QI+K L T ++D G + A LF +
Sbjct: 33 FSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMT 92
Query: 74 E--PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
E N +N MI AY +G AI++++QM + + P + T+ ++ +CA L
Sbjct: 93 ERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSEN-----VKPTEVTMVSLLSACAHLG 147
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
+G+ IH ++ LK + NAL+D+Y KC L A VF ++ ++I WN++I
Sbjct: 148 ALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIV 207
Query: 192 GYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQMV-GIE 246
G G+ ++A F M I V++ ++SG +H G + F +M V G+E
Sbjct: 208 GLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLE 267
Query: 247 P 247
P
Sbjct: 268 P 268
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/515 (33%), Positives = 278/515 (53%), Gaps = 30/515 (5%)
Query: 11 KELEDRFVPILQSCENLIEL-KKIHTQILKYLLSQSNFLVTKMIDVCN---SGGDLAYAS 66
K E+ + +L +C ++ K+IHT + L F K++ C S L Y+
Sbjct: 6 KSCEEILLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSL 65
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
LF P+ F+YN +IR+ +++ ++ + Q+LR P +LPD F+ F +K
Sbjct: 66 RLFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHP----TLLPDSFSFAFTLKG 121
Query: 127 CAGLLCPSL-GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
A C G Q+H+H + G H L+ +Y +C A KVF+EM+ ++VA
Sbjct: 122 IANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVA 181
Query: 186 WNNLISGYARLGQMKK-------ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
WN +++ R G + ++F +M SW+ MI G+ GS+ +A F+
Sbjct: 182 WNAVVTACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFK 241
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
++ P E+S+ VL ACAQ G+ E G+ +H + +K L + NALI+ Y KCG
Sbjct: 242 ELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCG 301
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
++ A +F+ LA HG+A +AI +FHEM+ V P+ +TFI LL
Sbjct: 302 NVDMAKLVFNI--------------SLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLY 347
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H+G +G F M+ + IE IEHYGC+VDL GRA RL +A I +MP+ P+
Sbjct: 348 ACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNV 407
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
IW +LL +C + N+E+A + L ++P ++G++VLLSN+YA G+W+DV+ +R+ +
Sbjct: 408 IIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTM 467
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKD 513
+SMKK PG S+IE++ FV+G+ K+
Sbjct: 468 IEQSMKKIPGWSMIEIDKVNYGFVAGEKPNEVTKE 502
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 277/483 (57%), Gaps = 42/483 (8%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFL----YNAMIRAYTNNHLYGLAINLYKQMLRDP 107
M+ + G+ A LFK +++ N+ L + A+I Y+ A+NL++QM+
Sbjct: 337 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF-- 394
Query: 108 RTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL---YGK 164
+GSL P+ T+ V+ +CA L S G +IHA+ K N LL L +G
Sbjct: 395 -SGSL--PNCVTIISVLSACASLGAFSQGTEIHAYSLK----------NCLLTLDNDFGG 441
Query: 165 CDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYT--TIVSWTAMIS 222
DE D++ +N LI Y++ K AR +FD +P +V+WT MI
Sbjct: 442 EDE--------------DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIG 487
Query: 223 GYTHIGSYAEALDVFRQM--QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHL 280
G+ G +AL +F +M + G+ P+ +I +L ACA L ++ +G+ IH Y ++H
Sbjct: 488 GHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHR 547
Query: 281 LRRTV--ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLF 338
+ + N LI+MY KCG ++ A +FD M ++ +SW++++ G HG+ +A+ +F
Sbjct: 548 YESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF 607
Query: 339 HEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
+M++ P+DITF+ +L AC+H G ++GL YFDSM D+ + + EHY C +DLL R
Sbjct: 608 DKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLAR 667
Query: 399 AGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLL 458
+GRLD+A +++MPM+P A +W +LLS+CR +SN+E+A A+ L+ + E+ G+Y L+
Sbjct: 668 SGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLI 727
Query: 459 SNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
SNIYA GRW+DV+R+R L++ +KK PGCS ++ F GD + P I+ LL
Sbjct: 728 SNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALL 787
Query: 519 ELL 521
E L
Sbjct: 788 ESL 790
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 219/440 (49%), Gaps = 41/440 (9%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE-- 74
+L++C L + H I + F+ ++ + + G L AS++F ++ +
Sbjct: 161 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 220
Query: 75 -PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT--------LPFVIK 125
+V +N+++ A+ + A++L+ +M +LI+ +K T + ++
Sbjct: 221 IDDVISWNSIVSAHVKSSNAWTALDLFSKM-------TLIVHEKPTNERSDIISIVNILP 273
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+C L K++H + + G NAL+D Y KC + A KVF M +D+V+
Sbjct: 274 ACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 333
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQ 241
WN +++GY++ G + A LF M I V+WTA+I+GY+ G EAL++FRQM
Sbjct: 334 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 393
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLL----------RRTVICNALI 291
G P+ ++I+SVL ACA LG+ G IH Y KN LL ++ NALI
Sbjct: 394 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 453
Query: 292 EMYIKCGCINQASQLFDQ--MVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVP 347
+MY KC A +FD + ER+VV+W+ +IGG A +G ++ A+ LF EM + V
Sbjct: 454 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 513
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-CLVDLLGRAGRLDQAL 406
PN T +L ACAH G + R H E CL+D+ + G +D A
Sbjct: 514 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTAR 573
Query: 407 NIIEEMPMKPDAKIWGSLLS 426
++ + M K A W S+++
Sbjct: 574 HVFDSMSQK-SAISWTSMMT 592
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 207/487 (42%), Gaps = 109/487 (22%)
Query: 2 AARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKY---------------LLSQSN 46
AR + + F +L+ C++ + +IH QI+ L
Sbjct: 25 GARAACIGVDVYPSHFASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEP 84
Query: 47 F-----LVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYK 101
F L T ++ + G YA L+ ++V +N +IR + AIN+
Sbjct: 85 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144
Query: 102 QMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDL 161
+MLR + PD FTLP V+K+C L G H +C G +S+ NAL+ +
Sbjct: 145 RMLR-----AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 199
Query: 162 YGKCDELIEAHKVFEEMTDR---DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWT 218
Y +C L EA +F+E+T R D+++WN+++S + + +WT
Sbjct: 200 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSN-----------------AWT 242
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIE------PDEISIVSVLPACAQLGSLELGEWIH 272
ALD+F +M ++ E D ISIV++LPAC L ++ + +H
Sbjct: 243 --------------ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVH 288
Query: 273 MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
+N + NALI+ Y KCG + A ++F+ M +DVVSW+ ++ G + G
Sbjct: 289 GNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFE 348
Query: 333 KAIHLFHEMQRLKVP-----------------------------------PNDITFIGLL 357
A LF M++ +P PN +T I +L
Sbjct: 349 AAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVL 408
Query: 358 SACAHTGFWNEGL-MYFDSMKR-----DHHIEHKIEH---YGCLVDLLGRAGRLDQALNI 408
SACA G +++G ++ S+K D+ + E Y L+D+ + A +I
Sbjct: 409 SACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSI 468
Query: 409 IEEMPMK 415
+++P++
Sbjct: 469 FDDIPLE 475
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 157/365 (43%), Gaps = 26/365 (7%)
Query: 187 NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
+++ Y G A ++ +++ + V W +I + G A++V +M G
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD ++ VL AC +L S G H N ICNAL+ MY +CG + +AS +
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 212
Query: 307 FDQMVER---DVVSWSTVIGGLANHGKAHKAIHLFHEMQRL--KVPPND----ITFIGLL 357
FD++ +R DV+SW++++ A A+ LF +M + + P N+ I+ + +L
Sbjct: 213 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 272
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
AC + + R+ + L+D + G ++ A+ + M K D
Sbjct: 273 PACGSLKAVPQTKEVHGNAIRNGTFP-DVFVGNALIDAYAKCGLMENAVKVFNMMEFK-D 330
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE-PEDTGNYVLLSNIYAKHG-RWEDVSRMR 475
W ++++ N E A +++ P D + + Y++ G E ++ R
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390
Query: 476 KLIRSKSMKKTPGC----SLIEVNNEVQEFVSGDDTKPF-LKDIFWLLELLALHQDRAKD 530
++I S S+ P C S++ + F G + + LK+ LL L D +
Sbjct: 391 QMIFSGSL---PNCVTIISVLSACASLGAFSQGTEIHAYSLKNC-----LLTLDNDFGGE 442
Query: 531 VIDIM 535
D+M
Sbjct: 443 DEDLM 447
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 105/238 (44%), Gaps = 17/238 (7%)
Query: 20 ILQSCENLIEL---KKIHTQILKYLLSQSN--FLVTKMIDVCNSGGDLAYASLLFKQVKE 74
IL +C +L + K+IH +L++ +S+ F+ +ID+ + GD+ A +F + +
Sbjct: 522 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 581
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--GLLC 132
+ + +M+ Y + A++++ +M + + +PD T V+ +C+ G++
Sbjct: 582 KSAISWTSMMTGYGMHGRGSEALDIFDKMRK-----AGFVPDDITFLVVLYACSHCGMVD 636
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
L + +GL + +DL + L +A + ++M + V W L+S
Sbjct: 637 QGL-SYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 695
Query: 192 GYARLGQMKKARMLFDK---MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
++ A +K M S+T + + Y G + + + M+ GI+
Sbjct: 696 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIK 753
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 271/523 (51%), Gaps = 39/523 (7%)
Query: 17 FVPILQSCEN--LIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L C+N +EL ++IH I++ L L +I++ G L A +F ++
Sbjct: 590 FASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR 649
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
NV + AMI + + A L+ QM D P K T ++K+C C
Sbjct: 650 HRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDG-----FKPVKSTFSSILKACMSSACL 704
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK++ AH+ G + D N LIS Y
Sbjct: 705 DEGKKVIAHILNSGY-------------------------------ELDTGVGNALISAY 733
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
++ G M AR +FDKMP I+SW MI+GY G AL QMQ G+ ++ S V
Sbjct: 734 SKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFV 793
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L AC+ +LE G+ +H K + + ALI MY KCG + +A ++FD E+
Sbjct: 794 SILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEK 853
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+VV+W+ +I A HG A KA+ F+ M + + P+ TF +LSAC H+G EG F
Sbjct: 854 NVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIF 913
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
S++ H + IEHYGCLV LLGRAGR +A +I +MP PDA +W +LL +CR + N
Sbjct: 914 SSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGN 973
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+ +A A + L L + YVLLSN+YA GRW+DV+++R+++ + ++K PG S IE
Sbjct: 974 VALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIE 1033
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
V+N + EF++ D + P +I+ L+ L+L +RA D Y
Sbjct: 1034 VDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQY 1076
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 199/414 (48%), Gaps = 43/414 (10%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
++ +L +C L IH+ I + S + +I + GDL A LF +
Sbjct: 388 YLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP 447
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ ++ +NA+I Y G A+ LYKQM + + P + T ++ +C
Sbjct: 448 KRDLISWNAIIAGYARREDRGEAMKLYKQMQSEG-----VKPGRVTFLHLLSACTNSSAY 502
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
S GK IH + + G+KS+ NAL+++Y +C ++EA VFE RDI++WN++I+G+
Sbjct: 503 SDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGH 562
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ GSY A +F +M+ G+EPD+I+
Sbjct: 563 AQH-------------------------------GSYEAAYKLFLEMKKEGLEPDKITFA 591
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL C +LELG IHM ++ L + NALI MYI+CG + A ++F + R
Sbjct: 592 SVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR 651
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+V+SW+ +IGG A+ G+ KA LF +MQ P TF +L AC + +EG
Sbjct: 652 NVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVI 711
Query: 374 DS-MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + ++ + + L+ ++G + A + ++MP + D W +++
Sbjct: 712 AHILNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMPNR-DIMSWNKMIA 762
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 211/482 (43%), Gaps = 70/482 (14%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
L E K+IH + L+ + T + + GD+A A + + +V +YNA+I A
Sbjct: 300 LDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAA 359
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
+ Y A Y QM D ++ ++ T V+ +C+ G+ IH+H+ +
Sbjct: 360 LAQHGHYEEAFEQYYQMRSDG-----VVMNRTTYLSVLNACSTSKALGAGELIHSHISEV 414
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
G S D+ N+LIS YAR G + +AR LF
Sbjct: 415 GHSS-------------------------------DVQIGNSLISMYARCGDLPRARELF 443
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
+ MP ++SW A+I+GY EA+ +++QMQ G++P ++ + +L AC +
Sbjct: 444 NTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYS 503
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
G+ IH ++ + + NAL+ MY +CG I +A +F+ RD++SW+++I G A
Sbjct: 504 DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHA 563
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-----------HTGFWNEGL----- 370
HG A LF EM++ + P+ ITF +L C H GL
Sbjct: 564 QHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVN 623
Query: 371 -------MYF--DSMKRDHHIEHKIEH-----YGCLVDLLGRAGRLDQALNIIEEMP--- 413
MY S++ + + H + H + ++ G +A + +M
Sbjct: 624 LGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDG 683
Query: 414 MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE-DTGNYVLLSNIYAKHGRWEDVS 472
KP + S+L +C + + L+ + H+L E DTG L + Y+K G D
Sbjct: 684 FKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDAR 743
Query: 473 RM 474
++
Sbjct: 744 KV 745
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 225/494 (45%), Gaps = 80/494 (16%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+V ++Q+C +L E K+IH Q+++ + FL +I++ ++ A +F ++
Sbjct: 85 YVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMP 144
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +N++I Y A L+++M +T I P K T ++ +C
Sbjct: 145 RRDVISWNSLISCYAQQGFKKKAFQLFEEM----QTAGFI-PSKITYISILTACCSPAEL 199
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK+IH+ + + G + +N+LL++YGKC++L A +VF + RD+V++N ++ Y
Sbjct: 200 EYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLY 259
Query: 194 AR----------LGQMKKARMLFDKMPYTTIVS--------------------------- 216
A+ GQM + DK+ Y ++
Sbjct: 260 AQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDI 319
Query: 217 --WTAMISGYTHIGSYA---EALDVFR----------------------------QMQMV 243
TA+ + + G A +AL+ F QM+
Sbjct: 320 RVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSD 379
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
G+ + + +SVL AC+ +L GE IH + + I N+LI MY +CG + +A
Sbjct: 380 GVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRA 439
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+LF+ M +RD++SW+ +I G A +A+ L+ +MQ V P +TF+ LLSAC ++
Sbjct: 440 RELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNS 499
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
+++G M + + R I+ L+++ R G + +A N+ E + D W S
Sbjct: 500 SAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNS 557
Query: 424 LLSSCRTYSNLEIA 437
+++ + + E A
Sbjct: 558 MIAGHAQHGSYEAA 571
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 157 ALLDLYGKCDE---LIEAHKVFEEMTDR----DIVAWNNLISGYARLGQMKKARMLFDKM 209
A +DL C L EA ++ +M + DI N LI+ Y + + A +F KM
Sbjct: 84 AYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKM 143
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
P ++SW ++IS Y G +A +F +MQ G P +I+ +S+L AC LE G+
Sbjct: 144 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGK 203
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
IH + R + N+L+ MY KC + A Q+F + RDVVS++T++G A
Sbjct: 204 KIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKA 263
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
+ I LF +M +PP+ +T+I LL A +EG
Sbjct: 264 YVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEG 303
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 249/405 (61%), Gaps = 31/405 (7%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
PD+ T+ ++ +CA L GK +H++ + GL + NA+LD+Y KCD++ A +V
Sbjct: 9 PDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEV 68
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F+++ ++SWT+M+SG G + E+L
Sbjct: 69 -------------------------------FNRIREKDVLSWTSMLSGLAKSGYFQESL 97
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+FR+MQ+ IEPDEI++V VL ACAQ G+L+ G++IH+ DK + V+ AL++MY
Sbjct: 98 ALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMY 157
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
KCG I+ A Q+F +M R+V +W+ +IGGLA HG AI LF +M+ K+ P+D+TFI
Sbjct: 158 AKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFI 217
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM 414
LL AC+H G +EGL F +MK IE ++EHYGC+VDLL RA ++D AL IE MP+
Sbjct: 218 ALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPI 277
Query: 415 KPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRM 474
K ++ +W +LL +CR+ + ++A ++ LEP+ G YV+LSN+YA +W+ ++
Sbjct: 278 KANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKL 337
Query: 475 RKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
RK +++K ++KTPGCS IE+N + +FV+GD + + I+ ++E
Sbjct: 338 RKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIE 382
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 125/216 (57%), Gaps = 4/216 (1%)
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ PDE+++VS++PACAQLG+LE G+ +H Y + L + NA+++MY KC I A
Sbjct: 7 LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
++F+++ E+DV+SW++++ GLA G +++ LF +MQ K+ P++IT +G+LSACA TG
Sbjct: 67 EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTG 126
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
++G Y + I + LVD+ + G +D AL + M ++ + W ++
Sbjct: 127 ALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNAM 184
Query: 425 LSSCRTYSNLEIAVIAMEHLLV--LEPEDTGNYVLL 458
+ + + E A+ + + L P+D LL
Sbjct: 185 IGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALL 220
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 10/236 (4%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
VP NL K +H+ + L ++ + ++D+ D+ A +F +++E +
Sbjct: 17 LVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVFNRIREKD 76
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V + +M+ + + ++ L+++M I PD+ TL V+ +CA G
Sbjct: 77 VLSWTSMLSGLAKSGYFQESLALFRKMQLHK-----IEPDEITLVGVLSACAQTGALDQG 131
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K IH + KF + + E AL+D+Y KC + A +VF M R++ WN +I G A
Sbjct: 132 KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMH 191
Query: 197 GQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEP 247
G + A LFD+M + V++ A++ +H G E L +F+ M+ IEP
Sbjct: 192 GHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEP 247
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/486 (37%), Positives = 271/486 (55%), Gaps = 19/486 (3%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQM-LRD-PRTGSLILPDK 117
G L A LF ++ EP+ YN M+ Y N A ++ M ++D P ++I
Sbjct: 21 GKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMI--TG 78
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
F + L K + +T NA++ Y +C +L A K+FE+
Sbjct: 79 FAQNQQMDKARDLFLIMPTKNV-------------VTWNAMISGYVECGDLDSALKLFEK 125
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
+ +VAW +I+GY +LG++ A LF+KMP +V+W AMI+GY + + +F
Sbjct: 126 APFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLF 185
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
R M GI+P+ ++ S L C++L +L+LG +H K+ L T +LI MY KC
Sbjct: 186 RTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKC 245
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
G + +LF Q+ RDVV+W+ +I G A HG+ KA+ LF EM + P+ ITF+ +L
Sbjct: 246 GVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVL 305
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
AC H GF + G+ YF SM +D+ + K +HY C+VDLLGRAG+L +A+++IE+MP KP
Sbjct: 306 MACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPH 365
Query: 418 AKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKL 477
A ++G+LL +CR + N E+A A + LL L+P YV L+N+YA RW+ V+R+RK
Sbjct: 366 AAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKS 425
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY- 536
++S + KTPG S IEV + +F SGD P L I L+ L A V D+ +
Sbjct: 426 MKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFA 485
Query: 537 -EDIGE 541
D+GE
Sbjct: 486 LHDVGE 491
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 148/332 (44%), Gaps = 43/332 (12%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T MI G + A LF+++ E N+ +NAMI Y NH + L++ M+
Sbjct: 135 TAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMV----- 189
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
G I P+ TL + C+ L LG+Q+H VCK L + +L+ +Y KC L
Sbjct: 190 GFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLE 249
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
+ K+F ++ RD+V WN +ISGYA+ G+ KKA LFD+M
Sbjct: 250 DGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEK----------------- 292
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICN 288
G++PD I+ V+VL AC G +LG ++ H L+ +
Sbjct: 293 --------------GMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYT 338
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL--FHEMQRLKV 346
++++ + G + +A L ++M + + V G L + HK + F + L +
Sbjct: 339 CMVDLLGRAGKLVEAVDLIEKMPFK---PHAAVFGTLLGACRIHKNTEMAEFASQKLLNL 395
Query: 347 PPNDIT-FIGLLSACAHTGFWNEGLMYFDSMK 377
P T ++ L + A T W+ SMK
Sbjct: 396 DPASATGYVQLANVYAATKRWDHVARVRKSMK 427
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 165/404 (40%), Gaps = 65/404 (16%)
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
LK+ + L + K +L EA ++F ++ + D V++N ++S Y R M++A+ F+
Sbjct: 3 LKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFE 62
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGS-LE 266
MP SW MI+G+ +A D+F M + +++S C L S L+
Sbjct: 63 DMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWN-AMISGYVECGDLDSALK 121
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
L E + V A+I Y+K G I A +LF++M E+++V+W+ +I G
Sbjct: 122 LFE--------KAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYI 173
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH------------------------ 362
+ +A + LF M + PN T L C+
Sbjct: 174 ENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTT 233
Query: 363 -----------TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
G +G F + R + + ++ + G +AL + +E
Sbjct: 234 AGTSLISMYCKCGVLEDGWKLFVQVPR-----RDVVTWNAMISGYAQHGEGKKALGLFDE 288
Query: 412 M---PMKPDAKIWGSLLSSCRTYSNLEIAV-----IAMEHLLVLEPEDTGNYVLLSNIYA 463
M MKPD + ++L +C ++ V +A ++ LV +P+ +Y + ++
Sbjct: 289 MIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPD---HYTCMVDLLG 345
Query: 464 KHGRWED----VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVS 503
+ G+ + + +M + G I N E+ EF S
Sbjct: 346 RAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFAS 389
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 285/522 (54%), Gaps = 53/522 (10%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVKEPNVF 78
LQ ++ E+++ I K L F+++K+I + G L YA +F+ N F
Sbjct: 119 LQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTAMDNPF 178
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL------- 131
+ N MIRAY + AI LY M R I D FT PF +K+CA +L
Sbjct: 179 VCNTMIRAYAKSVFPIKAIYLYNFMHRKD-----IKSDHFTYPFGLKACARVLWCNEGDI 233
Query: 132 -CPSL-----GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR---- 181
C L G +IH + + GL +N+L+ LY +C L A VF+EMT++
Sbjct: 234 KCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARCVFDEMTEKTITS 293
Query: 182 ---------------------------DIVAWNNLISGYARLGQMKKARMLFDKMPYTTI 214
++V+WN LI+ Y RLG+++ A+++F +MP
Sbjct: 294 WNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKVVFQEMPERDA 353
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
VSW +MI+GY I YA AL +FR+M++ +E +I+++SVL ACA+ G+LE+G IH+
Sbjct: 354 VSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVLGACAETGALEIGRKIHLS 413
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
+ + NAL++MY KCG +N A ++F ++ + + W+ +I LA HG +A
Sbjct: 414 LKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAVHGYCEEA 473
Query: 335 IHLFH--EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCL 392
+ LF EM PN +TFIG+L AC+H G +EG +F+ M ++ I I+HYGC+
Sbjct: 474 LRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEGRTFFNRMVNEYKIMPDIKHYGCM 533
Query: 393 VDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDT 452
VDLL R G L +A ++I+ MP + ++ +W +LL +CR + ++++A + + L +EP
Sbjct: 534 VDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGKMEPLRD 593
Query: 453 GNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
G+YVLLSNIYA+ RW DV R+R + + K PG S I +
Sbjct: 594 GDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKKPGSSHIGI 635
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 279/541 (51%), Gaps = 70/541 (12%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA---- 86
++ H QIL+ + F+ + ++ + G + A +F ++ NV +YN MI
Sbjct: 160 RQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRC 219
Query: 87 ---------------------------YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
+T N L A+N +++M I D++T
Sbjct: 220 KMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQG-----IAIDQYT 274
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
++ +C L GKQIHA++ + + +AL+D+Y KC +
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSI----------- 323
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
K A F +M I+SWTA+I GY G EA+ VF +
Sbjct: 324 --------------------KPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSE 363
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
MQ GI+PD+ ++ SV+ +CA L SLE G H + L+ + NAL+ +Y KCG
Sbjct: 364 MQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGS 423
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
I A +LFD+M+ D VSW+ ++ G A G+A + I LF +M V P+ +TFIG+LSA
Sbjct: 424 IEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSA 483
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+ GF +G YF SM++DH I +HY C++DL R+GRL +A I++MPM PDA
Sbjct: 484 CSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAI 543
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
WG+LLS+CR ++EI A E+LL ++P++ +YVLL +++A G W V+++R+ +R
Sbjct: 544 GWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMR 603
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL---ALHQDRAKDVIDIMY 536
+ +KK PGCS I+ N+V F + D + PF K I+ LE L L + DV +++
Sbjct: 604 DRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLH 663
Query: 537 E 537
+
Sbjct: 664 D 664
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 205/386 (53%), Gaps = 5/386 (1%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
LF + + + YNA+I ++ + A+ LY +LR GS + P + T+ ++ +
Sbjct: 94 LFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLR---AGSSVRPSRITMSAMVMAA 150
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
+ L +LG+Q H + + G ++ + L+ +Y K + +A +VF+EM +++V +N
Sbjct: 151 SALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYN 210
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+I+G R +++AR LF+ M ++WT M++G+T G ++AL+ FR+M+ GI
Sbjct: 211 TMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAI 270
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D+ + S+L AC L +LE G+ IH Y + H + +AL++MY KC I A F
Sbjct: 271 DQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAF 330
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
+M ++++SW+ +I G +G + +A+ +F EMQR + P+D T ++S+CA+
Sbjct: 331 RRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLE 390
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EG F + + H I LV L G+ G ++ A + +EM + D W +L++
Sbjct: 391 EGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM-LFHDQVSWTALVTG 448
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTG 453
+ + + E +L + + G
Sbjct: 449 YAQFGRAKETIDLFEKMLAKDVKPDG 474
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 163/358 (45%), Gaps = 44/358 (12%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F IL +C L L K+IH I++ + F+ + ++D+ + + A F+++
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMS 334
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
N+ + A+I Y N A+ ++ +M RD I PD FTL VI SCA L
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG-----IDPDDFTLGSVISSCANLASL 389
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G Q H GL + NAL+ LYGKC + +AH++F+EM D V+W L++GY
Sbjct: 390 EEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGY 449
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G+ K E +D+F +M ++PD ++ +
Sbjct: 450 AQFGRAK-------------------------------ETIDLFEKMLAKDVKPDGVTFI 478
Query: 254 SVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-V 311
VL AC++ G +E G + H + ++ +I++Y + G + +A + QM +
Sbjct: 479 GVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPM 538
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV-PPNDITFIGLLSACAHTGFWNE 368
D + W T++ G I + L++ P N +++ L S A G WN+
Sbjct: 539 HPDAIGWGTLLSACRLRGDME--IGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQ 594
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 162/389 (41%), Gaps = 73/389 (18%)
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
N LL YGK A +VF+ ++ +N L+S A + LF M V
Sbjct: 45 NHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTV 104
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVG--IEPDEISIVSVLPACAQLGSLELGEWIH- 272
S+ A+I+G++ G++A A+ ++ + G + P I++ +++ A + LG LG H
Sbjct: 105 SYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHC 164
Query: 273 -------------------MYC------DKNHLL-----RRTVICNALIEMYIKCGCINQ 302
MY D + + V+ N +I ++C + +
Sbjct: 165 QILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEE 224
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
A +LF+ M +RD ++W+T++ G +G +A++ F M+ + + TF +L+AC
Sbjct: 225 ARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGA 284
Query: 363 TGFWNEGLMYFDSMKRDHHIEH------------------------------KIEHYGCL 392
+G + R H+ ++ I + L
Sbjct: 285 LSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTAL 344
Query: 393 VDLLGRAGRLDQALNIIEEMP---MKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
+ G+ G ++A+ + EM + PD GS++SSC ++LE A H L L
Sbjct: 345 IVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEG--AQFHCLAL-V 401
Query: 450 EDTGNYVLLSN----IYAKHGRWEDVSRM 474
+Y+ +SN +Y K G ED R+
Sbjct: 402 SGLMHYITVSNALVTLYGKCGSIEDAHRL 430
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 203/600 (33%), Positives = 303/600 (50%), Gaps = 100/600 (16%)
Query: 17 FVPILQSCENLIELKKIHTQIL--KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK- 73
V + + C + L+++H Q++ + S +N L++K I + N YASLLF +
Sbjct: 21 LVFLAKQCSSSKTLQQVHAQMVVKSSIHSPNNHLLSKAIHLKN----FTYASLLFSHIAP 76
Query: 74 EPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
PN + +N MIRA T H Y LA+ L+ +M+ + + F L SCA L
Sbjct: 77 HPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFL-----SCANLAV 131
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKC----------DELI------------- 169
S + H+ V K L S T ++L+ +Y +C DE+
Sbjct: 132 LSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAG 191
Query: 170 --------EAHKVFEEMTDRD-----------------------IVAW------------ 186
EA +VF EM RD + W
Sbjct: 192 YAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTL 251
Query: 187 -----NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
+ LIS YA+ G + AR +FD M +++W A+ISGY G EA+ +F M+
Sbjct: 252 NSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMK 311
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
+ ++I++ +VL ACA +G+L+LG+ I Y + + ALI+MY KCG +
Sbjct: 312 EDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLA 371
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLLSA 359
A ++F +M +++ SW+ +I LA+HGKA +A+ LF M + PNDITF+GLLSA
Sbjct: 372 SAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSA 431
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C H G NEG FD M + KIEHY C+VDLL RAG L +A ++IE+MP KPD
Sbjct: 432 CVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKV 491
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
G+LL +CR+ N++I + +L ++P ++GNY++ S IYA WED +RMR L+R
Sbjct: 492 TLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMR 551
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539
K + KTPGCS IEV N + EF +GD L L ++ID++YE++
Sbjct: 552 QKGITKTPGCSWIEVENHLHEFHAGDG--------------LCLDSIDLSNIIDLLYEEL 597
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 286/543 (52%), Gaps = 41/543 (7%)
Query: 4 RIGALSIKELEDRFVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
R+ + +K + F+ IL C E L K +H Q + L + T +I + + G
Sbjct: 249 RMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCG 308
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTL 120
+ A +F +K +V + MI Y N A L+ M + I PD+ T
Sbjct: 309 SIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEG-----IQPDRITY 363
Query: 121 PFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTD 180
++ +CA + ++IH+ V G + + AL+ +Y KC
Sbjct: 364 MHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKC--------------- 408
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
G +K AR +FD MP +VSW+AMI Y G EA + F M
Sbjct: 409 ----------------GAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLM 452
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ IEPD ++ +++L AC LG+L++G I+ K L+ + NALI M K G +
Sbjct: 453 KRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSV 512
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
+A +FD MV RDV++W+ +IGG + HG A +A++LF M + + PN +TF+G+LSAC
Sbjct: 513 ERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSAC 572
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
+ GF +EG +F + I ++ YGC+VDLLGRAG LD+A +I+ MP+KP + I
Sbjct: 573 SRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSI 632
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
W SLL +CR + NL++A A E L+++P D YV LS++YA G WE+V+++RK++ S
Sbjct: 633 WSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMES 692
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL--ALHQDRAKDVIDIMYED 538
+ ++K GC+ IEV +V FV D + P + +I+ L L A+ ++ + + D
Sbjct: 693 RGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHD 752
Query: 539 IGE 541
+GE
Sbjct: 753 VGE 755
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 222/503 (44%), Gaps = 82/503 (16%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+V + Q C L + K++ I++ + + + +I + + G++ A +F V+
Sbjct: 60 YVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVE 119
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
V +NA+I Y A L++QM+ + + P T V+ +C+
Sbjct: 120 NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEG-----LEPSIITFLSVLDACSSPAGL 174
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ GK++HA V G S AL+ +Y K + +A +VF+ + RD+ +N ++ GY
Sbjct: 175 NWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGY 234
Query: 194 ARLGQMKKARMLF----------DKMPYTTI---------VSW----------------- 217
A+ G +KA LF +K+ + +I ++W
Sbjct: 235 AKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDI 294
Query: 218 ---TAMISGYTHIGS-------------------------YAE------ALDVFRQMQMV 243
T++I YT GS YAE A +F MQ
Sbjct: 295 RVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEE 354
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
GI+PD I+ + ++ ACA +L IH D ++ AL+ MY KCG I A
Sbjct: 355 GIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDA 414
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
Q+FD M RDVVSWS +IG +G +A FH M+R + P+ +T+I LL+AC H
Sbjct: 415 RQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHL 474
Query: 364 GFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G + G+ +Y ++K D + + L+ + + G +++A I + M ++ D W
Sbjct: 475 GALDVGMEIYTQAIKAD--LVSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWN 531
Query: 423 SLLSSCRTYSNLEIAVIAMEHLL 445
+++ + N A+ + +L
Sbjct: 532 AMIGGYSLHGNAREALYLFDRML 554
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 158/339 (46%), Gaps = 52/339 (15%)
Query: 145 KFGLKSHSITENALLDLYGKCDELIEA-------HKVFEEMTDRDIVAWNNLISGYARLG 197
+ G + I + L+ +C EL +A + + +I N LI Y+ G
Sbjct: 47 RLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICG 106
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+ +AR +FD + T+V+W A+I+GY +G EA +FRQM G+EP I+ +SVL
Sbjct: 107 NVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLD 166
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
AC+ L G+ +H + I AL+ MY+K G ++ A Q+FD + RDV +
Sbjct: 167 ACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVST 226
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC-----------AHTGFW 366
++ ++GG A G KA LF+ MQ++ + PN I+F+ +L C H
Sbjct: 227 FNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCM 286
Query: 367 NEGL------------MY------------FDSMK-RDHHIEHKIEHYGCLVDLLGRAGR 401
N GL MY FD+MK RD + + +++ G
Sbjct: 287 NAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRD------VVSWTVMIEGYAENGN 340
Query: 402 LDQALNI---IEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
++ A + ++E ++PD + ++++C +NL A
Sbjct: 341 IEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA 379
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 284/510 (55%), Gaps = 41/510 (8%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSG--GDLAYASLLF 69
E + +L+ C N+ E K++H + +K L S+ + +SG + YA+ +F
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ + +P F +N MIR Y N + A+ Y +M++ PD FT P ++K+C
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNE-----PDNFTYPCLLKACTR 144
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L GKQIH V K GL++ D+ N+L
Sbjct: 145 LKSIREGKQIHGQVFKLGLEA-------------------------------DVFVQNSL 173
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPD 248
I+ Y R G+M+ + +F+K+ T SW++M+S +G ++E L +FR M ++ +
Sbjct: 174 INMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAE 233
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
E +VS L ACA G+L LG IH + +N ++ +L++MY+KCGC+++A +F
Sbjct: 234 ESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQ 293
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M +R+ +++S +I GLA HG+ A+ +F +M + + P+ + ++ +L+AC+H+G E
Sbjct: 294 KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKE 353
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G F M ++ +E EHYGCLVDLLGRAG L++AL I+ +P++ + IW + LS C
Sbjct: 354 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 413
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R N+E+ IA + LL L + G+Y+L+SN+Y++ W+DV+R R I K +K+TPG
Sbjct: 414 RVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPG 473
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
S++E+ + FVS D + P K+I+ +L
Sbjct: 474 FSIVELKGKTHRFVSQDRSHPKCKEIYKML 503
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/506 (35%), Positives = 283/506 (55%), Gaps = 8/506 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
KK+H QI+K L+ + +ID G L A LF + + + + ++ A +
Sbjct: 28 KKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLS 87
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA--GLLCPSLGKQIHAHVCKFGL 148
+L A ++ +L + + PD F +IK+CA G + LGKQ+HA
Sbjct: 88 NLPHKAFSISLPILHEG-----LQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPF 142
Query: 149 KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDK 208
+ +++L+D+Y K + VF+ + + ++W +ISGYAR G+ +A LF +
Sbjct: 143 FEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRE 202
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLEL 267
P+ + +WTA+ISG G+ +AL +F +M+ G+ D + + SV+ ACA EL
Sbjct: 203 SPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVREL 262
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
G+ +H I NAL++MY KC + A +F +M +DVVSW+++I G A
Sbjct: 263 GKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQ 322
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
HG A +A+ L+ +M V PN++TF+GL+ AC+H G ++G F SM D I ++
Sbjct: 323 HGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQ 382
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
HY CL+DL R+G LD+A N+I MP+KPD W +LLS+C+ + N ++AV +HLL L
Sbjct: 383 HYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDL 442
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDT 507
+PED +Y+LLSNIYA G WE+VS +RKL+ K +KK PG S +++ E Q F +G+ +
Sbjct: 443 KPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEAS 502
Query: 508 KPFLKDIFWLLELLALHQDRAKDVID 533
+P +I L+ L R V D
Sbjct: 503 QPMKDEILGLMTKLDSEMRRRGYVPD 528
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 37/249 (14%)
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
P + K++HA + K GL H L+D YGKC L +A K+F+ + +D VAW ++S
Sbjct: 24 PFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSA 83
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+P+ +++ +L + + G++PD
Sbjct: 84 CN-----------LSNLPHK----------------AFSISLPILHE----GLQPDHFVF 112
Query: 253 VSVLPACAQLGS--LELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
S++ ACA LGS ++LG+ +H + V+ ++L++MY K + +FD +
Sbjct: 113 SSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSI 172
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
E +SW+ +I G A G+ +A+ LF E N + L+S +G N+ L
Sbjct: 173 FELSSISWTAMISGYARSGRKLEALELFRESPF----KNLYAWTALISGLVQSGNANDAL 228
Query: 371 MYFDSMKRD 379
F M+R+
Sbjct: 229 YLFVEMRRE 237
>gi|297729191|ref|NP_001176959.1| Os12g0490100 [Oryza sativa Japonica Group]
gi|255670316|dbj|BAH95687.1| Os12g0490100 [Oryza sativa Japonica Group]
Length = 451
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/439 (37%), Positives = 252/439 (57%), Gaps = 32/439 (7%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSI-TENALLDLYGKCDELIEAHK 173
P+ FT+ VIK C+ + G Q+HA + K GL S+ ALLDLYG + +A +
Sbjct: 8 PNAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGLGCSSVHVGAALLDLYGNIGLVGDARR 67
Query: 174 VFEEM-------------------------------TDRDIVAWNNLISGYARLGQMKKA 202
VF+EM +RD ++WN L+SGY LG
Sbjct: 68 VFDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGMAERDPISWNTLMSGYLHLGDTATV 127
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
R LFD+M + SW MI+ + GS A+ + VF +M+ G EPD ++ ++ ACAQL
Sbjct: 128 RELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFNRMRATGFEPDAATMAVLMSACAQL 187
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
GSL + +H K+ + + N+LI+MY KCGCI+QA LF + +D VS++ +I
Sbjct: 188 GSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTETYPKDTVSYNVMI 247
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
A HG A A+ LF+ M + P+ +TF+G+LSACAH G G YF+ MK + +
Sbjct: 248 IAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLSACAHAGLVEYGKNYFELMKTTYAV 307
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
+ +HY C+VDL GRAG +++A ++ MP+KP A +WG+LL++CR + ++++ IA +
Sbjct: 308 QQSPDHYACVVDLYGRAGLIEEAHCFVKTMPVKPHAGVWGALLNACRKHCHVDVGEIAAK 367
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
L+ +EP++ GNYVLL N A+ +W+ V ++ +R K + KT GCS +EV++ V EF+
Sbjct: 368 ELIRIEPKNPGNYVLLRNTLARGQQWDAVEDVQLSMRRKVIDKTAGCSWVEVDSVVHEFL 427
Query: 503 SGDDTKPFLKDIFWLLELL 521
+GD P +I+ +LE L
Sbjct: 428 AGDFYHPKFDEIYTILEHL 446
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 132/310 (42%), Gaps = 39/310 (12%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD A LF ++ NV +N MI A + + ++ +M + PD T
Sbjct: 122 GDTATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFNRM-----RATGFEPDAAT 176
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ ++ +CA L ++ Q+H + K ++ + +N+L+D+Y KC + +A +F E
Sbjct: 177 MAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTETY 236
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+D V++N +I +A+ G + +ALD+F
Sbjct: 237 PKDTVSYNVMIIAFAQHGHAR-------------------------------DALDLFNA 265
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA-LIEMYIKCG 298
M G++PD ++ + VL ACA G +E G+ + ++++ A ++++Y + G
Sbjct: 266 MVDSGLQPDAVTFLGVLSACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAG 325
Query: 299 CINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
I +A M V+ W ++ H E+ R++ P N ++ L
Sbjct: 326 LIEEAHCFVKTMPVKPHAGVWGALLNACRKHCHVDVGEIAAKELIRIE-PKNPGNYVLLR 384
Query: 358 SACAHTGFWN 367
+ A W+
Sbjct: 385 NTLARGQQWD 394
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 45/263 (17%)
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQ 302
G P+ ++ SV+ C+++ ++ G +H + K L +V + AL+++Y G +
Sbjct: 5 GPRPNAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGLGCSSVHVGAALLDLYGNIGLVGD 64
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH 362
A ++FD+M ++VV +T++ G A +F M + I++ L+S H
Sbjct: 65 ARRVFDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGMAE----RDPISWNTLMSGYLH 120
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM---PMKPDAK 419
G FD M + + ++ G L + + M +PDA
Sbjct: 121 LGDTATVRELFDEMTV-----RNVNSWNTMIAACSEEGSLADTVKVFNRMRATGFEPDAA 175
Query: 420 IWGSLLSSCRTYSNLEIA------------------------------VIAMEHLLVLE- 448
L+S+C +L IA I+ L E
Sbjct: 176 TMAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTET 235
Query: 449 -PEDTGNYVLLSNIYAKHGRWED 470
P+DT +Y ++ +A+HG D
Sbjct: 236 YPKDTVSYNVMIIAFAQHGHARD 258
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 9/163 (5%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
++ +C L L ++H + K + + + +ID+ G ++ A LF + +
Sbjct: 180 LMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTETYPKD 239
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
YN MI A+ + A++L+ M+ S + PD T V+ +CA G
Sbjct: 240 TVSYNVMIIAFAQHGHARDALDLFNAMVD-----SGLQPDAVTFLGVLSACAHAGLVEYG 294
Query: 137 KQ-IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
K + ++ ++DLYG+ + EAH + M
Sbjct: 295 KNYFELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKTM 337
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 257/472 (54%), Gaps = 44/472 (9%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
MI GDL+ A LF++ +VF + AM+ AY + + A ++ +M
Sbjct: 225 MISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM-------- 276
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEA 171
P K + + N ++ Y + +
Sbjct: 277 ---PQKREMSY---------------------------------NVMIAGYAQYKRMDMG 300
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
++FEEM +I +WN +ISGY + G + +AR LFD MP VSW A+I+GY G Y
Sbjct: 301 RELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYE 360
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EA+++ +M+ G + + L ACA + +LELG+ +H + + ++ NAL+
Sbjct: 361 EAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALV 420
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
MY KCGCI++A +F + +D+VSW+T++ G A HG +A+ +F M V P++I
Sbjct: 421 GMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEI 480
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
T +G+LSAC+HTG + G YF SM +D+ I +HY C++DLLGRAG L++A N+I
Sbjct: 481 TMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRN 540
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDV 471
MP +PDA WG+LL + R + N+E+ A E + +EP ++G YVLLSN+YA GRW DV
Sbjct: 541 MPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDV 600
Query: 472 SRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
S+MR +R ++KTPG S +EV N++ F GD P I+ LE L L
Sbjct: 601 SKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDL 652
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 164/326 (50%), Gaps = 25/326 (7%)
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+S++ NA++ Y + + A +F++M +D+ +WN +++GYAR +++ ARMLFD MP
Sbjct: 63 NSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMP 122
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+VSW AM+SGY G EA DVF +M + IS +L A + G LE E
Sbjct: 123 EKDVVSWNAMLSGYVRSGHVDEARDVFDRMP----HKNSISWNGLLAAYVRSGRLE--EA 176
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
++ K+ + CN L+ Y+K + A QLFDQ+ RD++SW+T+I G A G
Sbjct: 177 RRLFESKSDW--ELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGD 234
Query: 331 AHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
+A LF E P D+ T+ ++ A G +E FD M + + Y
Sbjct: 235 LSQARRLFEE-----SPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMS-----Y 284
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
++ + R+D + EEMP P+ W ++S +L A +L + P
Sbjct: 285 NVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQNGDLAQA----RNLFDMMP 339
Query: 450 E-DTGNYVLLSNIYAKHGRWEDVSRM 474
+ D+ ++ + YA++G +E+ M
Sbjct: 340 QRDSVSWAAIIAGYAQNGLYEEAMNM 365
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 281/486 (57%), Gaps = 43/486 (8%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
K+H ++LK + +++ C ++ L+YA +F + P+ F +N +IRA+ +
Sbjct: 6 KLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAHAD 65
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
+ K + + + PD FT PFV+K+CA L + GL
Sbjct: 66 SSPSFSLSLFSKMAM------AGVSPDHFTFPFVLKACARL--------------QTGLD 105
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
HS+ +F+ D D+ N LI Y G + A +F++M
Sbjct: 106 LHSL--------------------LFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEM 145
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSLELG 268
P +VSW++MI+ + G EAL +F++MQ+VG ++PDE+ ++SV+ A + LG LELG
Sbjct: 146 PERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELG 205
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+WI + +N L + AL++M+ +CGCI ++ ++FD+M ER+V++W+ +I GLA H
Sbjct: 206 KWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVH 265
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G++ +A+ +F+EM+ P+ +TF G+L AC+H G +EG F+S++ ++ +E EH
Sbjct: 266 GRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEH 325
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
YGC+VDLLGRAG L++A ++ MP++P++ IW +LL +C ++ +E+A E + L+
Sbjct: 326 YGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELD 385
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
G+YVLLSN+Y GRW + + +R +R K + K PGCSLI VN+ + EFV+GD+
Sbjct: 386 SYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNH 445
Query: 509 PFLKDI 514
P + I
Sbjct: 446 PQFESI 451
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 161/366 (43%), Gaps = 44/366 (12%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F +L++C L +H+ + K ++ +I G L +A +F+++ E +
Sbjct: 90 FPFVLKACARLQTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERD 149
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +++MI + N A+ L+++M + + PD+ + V+ + + L LG
Sbjct: 150 LVSWSSMIACFAKNGFGYEALALFQRM----QLVGTVKPDEVIVLSVVSAISILGDLELG 205
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K I + + GL+ AL+D++ +C + E+ +VF+EM +R+++ W LI+G A
Sbjct: 206 KWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVH 265
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G+ AEAL +F +M+ G +PD ++ VL
Sbjct: 266 GRS-------------------------------AEALRMFYEMRNHGFQPDHVTFTGVL 294
Query: 257 PACAQLGSLELGEWIHMYCDKNHL----LRRTVICNALIEMYIKCGCINQASQLFDQM-V 311
AC+ G + G W +N L C ++++ + G +N+A + D M +
Sbjct: 295 VACSHGGLVSEG-WHVFESIRNEYGMEPLPEHYGC--MVDLLGRAGLLNEACKFVDGMPI 351
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+ + W T++G NH A + ++ L +D ++ L + G W E
Sbjct: 352 RPNSIIWRTLLGACVNHNYIELAEKVKEKINELD-SYHDGDYVLLSNVYGGVGRWAEKAG 410
Query: 372 YFDSMK 377
+SM+
Sbjct: 411 VRNSMR 416
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/513 (34%), Positives = 283/513 (55%), Gaps = 19/513 (3%)
Query: 19 PILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVF 78
P+++S + + +K+ + K + + ++ T MI DL A L + P
Sbjct: 192 PLVKSSQLMASARKVFDETPKNQIYEPSW--TTMIAGYVRNDDLVAARELLDGLTYPIDV 249
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA------GLLC 132
+NAMI Y LY A + +++M I D++T +I +C G+
Sbjct: 250 AWNAMISGYVRRGLYEEAFDTFRRM-----HSMGIQEDEYTYTSLISACGSCNEKMGMF- 303
Query: 133 PSLGKQIHAHVCKFGLK-SHSIT---ENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
+ G+Q+H ++ + ++ SH NAL+ Y K D +IEA +VF++M RDI++WN
Sbjct: 304 -NCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNA 362
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
++SGY ++++A +F +MP +++WT MISG G E L +F QM+ G+EP
Sbjct: 363 VLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPC 422
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
+ + + AC+ LGSL+ G+ IH + NALI MY +CG + A +F
Sbjct: 423 DYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFL 482
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M D VSW+ +I LA HG KAI LF +M + + P+ ITF+ +L+AC H G E
Sbjct: 483 TMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKE 542
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G YFD+M + I +HY L+DLL RAG +A ++I+ MP + A IW +LL+ C
Sbjct: 543 GRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGC 602
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R + N+E+ + A + LL L P G Y++LSN+YA G+W++V+R+R L+R + +KK PG
Sbjct: 603 RIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPG 662
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
CS +EV N V F+ D P ++ ++ L+ L
Sbjct: 663 CSWVEVENMVHVFLVDDARHPEVQAVYTYLQQL 695
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 192/431 (44%), Gaps = 73/431 (16%)
Query: 8 LSIKELEDRFVPILQSCENL-IELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYAS 66
+ +++L R++ L I + +H IL + F++ ++I++ ++ YA
Sbjct: 1 MDVRDLAYRYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYAR 60
Query: 67 LLFKQVKEPNVFL---------------------------------YNAMIRAYTNNHLY 93
LF ++ +P++ YNAMI AY++ +
Sbjct: 61 KLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDG 120
Query: 94 GLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ-IHAHVCKFGLKSHS 152
A+NL+ QM R LPD FT V+ + + + Q +H V K G
Sbjct: 121 HAALNLFVQMKRYG-----FLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIP 175
Query: 153 ITENALLDLYGKCDE---------LIEAHKVFEEMTDRDIV--AWNNLISGYARLGQMKK 201
NALL Y C + A KVF+E I +W +I+GY R +
Sbjct: 176 SVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVA 235
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA- 260
AR L D + Y V+W AMISGY G Y EA D FR+M +GI+ DE + S++ AC
Sbjct: 236 ARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGS 295
Query: 261 ---QLGSLELGEWIHMYCDKNHLLRRTV---------ICNALIEMYIKCGCINQASQLFD 308
++G G +H Y +LR V + NALI Y K + +A ++FD
Sbjct: 296 CNEKMGMFNCGRQVHGY-----ILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFD 350
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M RD++SW+ V+ G N + +A +F EM V +T+ ++S A GF E
Sbjct: 351 KMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNV----LTWTVMISGLAQNGFGEE 406
Query: 369 GLMYFDSMKRD 379
GL F+ MK +
Sbjct: 407 GLKLFNQMKSE 417
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 151/347 (43%), Gaps = 59/347 (17%)
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
+ + +HAH+ G K ++ N L+++Y K + A K+F+++ DIVA L+S Y+
Sbjct: 23 IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82
Query: 195 RLGQMKKARMLFDKMPYTT--IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
G +K A+ LF+ P T VS+ AMI+ Y+H AL++F QM+ G PD +
Sbjct: 83 SSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTF 142
Query: 253 VSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKCGC---------INQ 302
SVL A + + E + +H K L + NAL+ Y+ C +
Sbjct: 143 SSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMAS 202
Query: 303 ASQLFDQMVERDV---------------------------------VSWSTVIGGLANHG 329
A ++FD+ + + V+W+ +I G G
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH-----HIEH 384
+A F M + + ++ T+ L+SAC G NE + F+ ++ H +
Sbjct: 263 LYEEAFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMGMFNCGRQVHGYILRTVVE 319
Query: 385 KIEHY-----GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
H+ L+ + R+ +A + ++MP++ D W ++LS
Sbjct: 320 PSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLS 365
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 278/511 (54%), Gaps = 42/511 (8%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN--SGGDLAYASLLFKQVKEPNV 77
+L+ C ++ L +IH+QI L FLVT++I + DL+YA + P
Sbjct: 670 LLKLCSSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSLSPSKDLSYAQSILDHSVHPVP 729
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+N +IR Y +++ A+ +Y+ M + I P+ T PF++K+CA GK
Sbjct: 730 LPWNILIRGYADSNTPKDALFVYRNMRNEG-----IRPNSLTFPFLLKACAACFATKEGK 784
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
Q+H V K+GL N L++ YG C ++++A K
Sbjct: 785 QVHVEVIKYGLDCDVYVNNNLVNFYGSCKKILDACK------------------------ 820
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+FD+MP T+VSW A+I+ EA+ F +M+ G EPD ++V +L
Sbjct: 821 -------VFDEMPERTVVSWNAVITSCVESLKLGEAIRYFLKMRDFGFEPDGTTMVLMLV 873
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
CA++G+L LG WIH + L+ + AL++MY K G + A +FD+M E++V +
Sbjct: 874 ICAEMGNLGLGRWIHSQVIERGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMKEKNVWT 933
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
WS +I GLA HG A + + LF +M R + PN +TF+G+L AC+H G ++G YF M
Sbjct: 934 WSAMILGLAQHGFAKEGLELFLDMMRSSLIHPNYVTFLGVLCACSHAGLVSDGFRYFHEM 993
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY---SN 433
+ I+ + HYG +VD+LGRAG L +A N I +MP +PD +W +LLS+C + +
Sbjct: 994 GHTYGIKPMMVHYGAMVDILGRAGLLKEAYNFITKMPFQPDPIVWRTLLSACSIHDVKDS 1053
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+A + LL LEP +GN+V+++N+YA G WE +++R+++R +KK G S +E
Sbjct: 1054 TGVAYKVRKRLLELEPRRSGNFVMVANMYADAGMWEKAAKVRRVMRDGGLKKKAGESCVE 1113
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
++ + F SG D++ + ++ LL+ L LH
Sbjct: 1114 LSGSIHRFFSGYDSQDDKEGMYQLLDGLNLH 1144
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 271/492 (55%), Gaps = 36/492 (7%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+ IHTQ LK +++F+ + + N G L Y F++++ +V + ++ AY
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM 296
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ +K+M S ++P+++T VI CA G+Q+HAHV G +
Sbjct: 297 GKEDCGLQAFKRM-----RASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
N+++ LY KC EL K +F M
Sbjct: 352 ALSVANSIMTLYSKCGELASVSK-------------------------------VFCSMK 380
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+ I++W+ +I+ Y+ +G EA + +M+ G +P+E ++ SVL C + LE G+
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
+H + L + +++C+ALI MY KCG I +AS++F + D++SW+ +I G A HG
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+ +AI LF +Q++ + P+ +TFIG+L+AC+H G + G YF+SM +D+HI EHYG
Sbjct: 501 SQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYG 560
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C++DLL RAGRL A +I MP++ D +W +LL +CR + +++ A +L L+P
Sbjct: 561 CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPN 620
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
G ++ L+NI+A G+W++ + +R L++SK + K PG S ++V + V FVSGD + P
Sbjct: 621 CAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQ 680
Query: 511 LKDIFWLLELLA 522
+DI+ +LE LA
Sbjct: 681 GEDIYNILEELA 692
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 167/374 (44%), Gaps = 48/374 (12%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
R+ A ++ E F ++ C N LK ++H +L + + ++ + + G
Sbjct: 308 RMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCG 367
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD--PRTGSLILPDKF 118
+LA S +F +K ++ ++ +I AY+ YG Y +R P+ P++F
Sbjct: 368 ELASVSKVFCSMKFRDIITWSTIIAAYSQVG-YGEEAFEYLSRMRSEGPK------PNEF 420
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
L V+ C + GKQ+HAHV GL+ S+ +AL+ +Y KC + EA K+F +
Sbjct: 421 ALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDS 480
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
DI++W +ISGYA G + EA+++F
Sbjct: 481 WKDDIISWTAMISGYAEHGHSQ-------------------------------EAIELFE 509
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN-HLLRRTVICNALIEMYIKC 297
+Q VG+ PD ++ + VL AC+ G ++LG + K+ H+ +I++ +
Sbjct: 510 NIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRA 569
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIG 355
G ++ A L M ++ D V WST++ HG E+ LK+ PN T I
Sbjct: 570 GRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEV--LKLDPNCAGTHIT 627
Query: 356 LLSACAHTGFWNEG 369
L + A G W E
Sbjct: 628 LANIFAAKGKWKEA 641
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 129/305 (42%), Gaps = 37/305 (12%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
LF Q+ + + + +I Y N+ A+ L+ +M R S + D F L +K+C
Sbjct: 71 LFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKM----RLQSELRIDPFLLSLGLKTC 126
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
L G +H K GL + +ALLD+Y K E+ + KVF+EM R+ V W
Sbjct: 127 GLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWT 186
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+I+G R +GY+ G L F M +E
Sbjct: 187 AVITGLVR--------------------------AGYSEAG-----LAYFSGMGRSKVEY 215
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D + L A A G+L G IH K + + N+L MY KCG ++ F
Sbjct: 216 DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTF 275
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF-- 365
+M DVVSW+T++ GK + F M+ V PN+ TF ++S CA+
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 366 WNEGL 370
W E L
Sbjct: 336 WGEQL 340
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 126/250 (50%), Gaps = 9/250 (3%)
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
D+ NN + + +K AR LFD++P VSWT +ISGY + +EAL +F +M+
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 242 M---VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+ + I+P +S+ L C + G +H + K L+ + +AL++MY+K G
Sbjct: 108 LQSELRIDPFLLSLG--LKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIG 165
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I ++ ++FD+M R+ V+W+ VI GL G + + F M R KV + + L
Sbjct: 166 EIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALK 225
Query: 359 ACAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
A A +G N G ++ ++K+ + + L + + G+LD L+ +M D
Sbjct: 226 ASADSGALNHGRSIHTQTLKKGFDENSFVAN--SLTTMYNKCGKLDYGLHTFRKM-RTLD 282
Query: 418 AKIWGSLLSS 427
W +++++
Sbjct: 283 VVSWTTIVTA 292
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 232/379 (61%), Gaps = 5/379 (1%)
Query: 145 KFGLKSHSITENALLDLYGKCDELIEAHKV-FEEMTDRDIVAWNNLISGYARLGQMKKAR 203
K G +H + N+LL LY L A +V + D+V+WN ++SGY + G + AR
Sbjct: 106 KCGALAHPVVTNSLLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAR 165
Query: 204 MLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLG 263
+F +MP +VSW+AM+ G + EAL VF +M PD + +VSVL ACA LG
Sbjct: 166 EVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLG 225
Query: 264 SLELGEWIHMYCDKNHLLRRT---VICNALIEMYIKCGCINQASQLFDQMVERDVVSWST 320
++E G W+H Y + R ++ AL++MY KCGC+ A Q+FD + RDVV W+
Sbjct: 226 AVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNA 285
Query: 321 VIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDH 380
+IGGLA +G +A+ LF M + PN+ TFI +L AC HTG +EG F SM+ D+
Sbjct: 286 MIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQ-DY 344
Query: 381 HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIA 440
I+ + EHYGCL DLLGRAG +++A ++ +MPM+P A WG+L+SSC+ ++++ +
Sbjct: 345 GIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERV 404
Query: 441 MEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQE 500
+ L+ LEP D G YV+L N+YA +GRWE+ +R+++ + KK G S IE+N V E
Sbjct: 405 GKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHE 464
Query: 501 FVSGDDTKPFLKDIFWLLE 519
F+SGD P + I+ LLE
Sbjct: 465 FISGDTRHPLTRKIYALLE 483
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 12/225 (5%)
Query: 52 MIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGS 111
M+ GGDL A +F ++ E N+ ++AM+ A +G A+ ++ +M+R+
Sbjct: 151 MVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREE---- 206
Query: 112 LILPDKFTLPFVIKSCAGLLCPSLGKQIHAHV--CKFGLKSHSIT-ENALLDLYGKCDEL 168
PD L V+K+CA L G+ +H ++ FG + ++ E AL+D+Y KC +
Sbjct: 207 -FRPDVVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCM 265
Query: 169 IEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV----SWTAMISGY 224
+A +VF+ + RD+V WN +I G A G ++A LF +M + ++ A++
Sbjct: 266 EDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCAC 325
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE 269
TH G E VF+ MQ GI+P + + G++E E
Sbjct: 326 THTGRVDEGKRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEEAE 370
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSN-------FLVTKMIDVCNSGGDLAYASLLF 69
V +L++C +L +++ + +YL + S L T ++D+ G + A +F
Sbjct: 214 LVSVLKACAHLGAVER-GRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVF 272
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
V +V L+NAMI N A+ L+++ML+ +P++ T V+ +C
Sbjct: 273 DGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKG-----FMPNESTFIAVLCACTH 327
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNN 188
GK++ + +G+K L DL G+ + EA + +M + W
Sbjct: 328 TGRVDEGKRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPMEPHASQWGA 387
Query: 189 LIS 191
L+S
Sbjct: 388 LMS 390
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 271/492 (55%), Gaps = 36/492 (7%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+ IHTQ LK +++F+ + + N G L Y F++++ +V + ++ AY
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM 296
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ +K+M S ++P+++T VI CA G+Q+HAHV G +
Sbjct: 297 GKEDCGLQAFKRM-----RASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
N+++ LY KC EL K +F M
Sbjct: 352 ALSVANSIMTLYSKCGELASVSK-------------------------------VFCSMK 380
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+ I++W+ +I+ Y+ +G EA + +M+ G +P+E ++ SVL C + LE G+
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
+H + L + +++C+ALI MY KCG I +AS++F + D++SW+ +I G A HG
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+ +AI LF +Q++ + P+ +TFIG+L+AC+H G + G YF+SM +D+HI EHYG
Sbjct: 501 SQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYG 560
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C++DLL RAGRL A +I MP++ D +W +LL +CR + +++ A +L L+P
Sbjct: 561 CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPN 620
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
G ++ L+NI+A G+W++ + +R L++SK + K PG S ++V + V FVSGD + P
Sbjct: 621 CAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQ 680
Query: 511 LKDIFWLLELLA 522
+DI+ +LE LA
Sbjct: 681 GEDIYNILEELA 692
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 167/374 (44%), Gaps = 48/374 (12%)
Query: 4 RIGALSIKELEDRFVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGG 60
R+ A ++ E F ++ C N LK ++H +L + + ++ + + G
Sbjct: 308 RMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCG 367
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD--PRTGSLILPDKF 118
+LA S +F +K ++ ++ +I AY+ YG Y +R P+ P++F
Sbjct: 368 ELASVSKVFCSMKFRDIITWSTIIAAYSQVG-YGEEAFEYLSRMRSEGPK------PNEF 420
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
L V+ C + GKQ+HAHV GL+ S+ +AL+ +Y KC + EA K+F +
Sbjct: 421 ALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDS 480
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
DI++W +ISGYA G + EA+++F
Sbjct: 481 WKDDIISWTAMISGYAEHGHSQ-------------------------------EAIELFE 509
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN-HLLRRTVICNALIEMYIKC 297
+Q VG+ PD ++ + VL AC+ G ++LG + K+ H+ +I++ +
Sbjct: 510 NIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRA 569
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIG 355
G ++ A L M ++ D V WST++ HG E+ LK+ PN T I
Sbjct: 570 GRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEV--LKLDPNCAGTHIT 627
Query: 356 LLSACAHTGFWNEG 369
L + A G W E
Sbjct: 628 LANIFAAKGKWKEA 641
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 129/305 (42%), Gaps = 37/305 (12%)
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
LF Q+ + + + +I Y N+ A+ L+ +M R S + D F L +K+C
Sbjct: 71 LFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKM----RLQSELRIDPFLLSLGLKTC 126
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
L G +H K GL + +ALLD+Y K E+ + KVF+EM R+ V W
Sbjct: 127 GLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWT 186
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
+I+G R +GY+ G L F M +E
Sbjct: 187 AVITGLVR--------------------------AGYSEAG-----LAYFSGMGRSKVEY 215
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D + L A A G+L G IH K + + N+L MY KCG ++ F
Sbjct: 216 DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTF 275
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGF-- 365
+M DVVSW+T++ GK + F M+ V PN+ TF ++S CA+
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 366 WNEGL 370
W E L
Sbjct: 336 WGEQL 340
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 126/250 (50%), Gaps = 9/250 (3%)
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
D+ NN + + +K AR LFD++P VSWT +ISGY + +EAL +F +M+
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 242 M---VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+ + I+P +S+ L C + G +H + K L+ + +AL++MY+K G
Sbjct: 108 LQSELRIDPFLLSLG--LKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIG 165
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I ++ ++FD+M R+ V+W+ VI GL G + + F M R KV + + L
Sbjct: 166 EIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALK 225
Query: 359 ACAHTGFWNEGL-MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
A A +G N G ++ ++K+ + + L + + G+LD L+ +M D
Sbjct: 226 ASADSGALNHGRSIHTQTLKKGFDENSFVAN--SLTTMYNKCGKLDYGLHTFRKM-RTLD 282
Query: 418 AKIWGSLLSS 427
W +++++
Sbjct: 283 VVSWTTIVTA 292
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/523 (34%), Positives = 283/523 (54%), Gaps = 40/523 (7%)
Query: 17 FVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+ IL +C LK+ IH +I+K + + T ++ + G L A +F+++
Sbjct: 410 FMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS 469
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ NV +NAMI AY + Y A+ ++ +L++ I PD T ++ C
Sbjct: 470 KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEG-----IKPDSSTFTSILNVCKSPDAL 524
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LGK + + + + G +S NAL+ ++ C +L+ A
Sbjct: 525 ELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMN-------------------- 564
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
LF+ MP +VSW +I+G+ G A D F+ MQ G++PD+I+
Sbjct: 565 -----------LFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFT 613
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
+L ACA +L G +H + L V+ LI MY KCG I+ A +F + ++
Sbjct: 614 GLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKK 673
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+V SW+++I G A HG+ +A+ LF +MQ+ V P+ ITF+G LSACAH G EGL +F
Sbjct: 674 NVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHF 733
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+SMK D +IE ++EHYGC+VDL GRAG L +A+ I +M +KPD+++WG+LL +C+ + +
Sbjct: 734 ESMK-DFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLD 792
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A + L L+P D G YV+LSNIYA G W++V++MRK++ + + K PG S IE
Sbjct: 793 VELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIE 852
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
V+ V F S D T P +++I L L + + V D Y
Sbjct: 853 VDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRY 895
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 210/433 (48%), Gaps = 43/433 (9%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+ +LQ C +NL + ++IH I + F+ +I + G+ A +F ++
Sbjct: 107 YSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMP 166
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+ +V+ +N ++ Y + Y A L++QM++D + PDK+T +++ +CA
Sbjct: 167 DKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDG-----VKPDKYTFVYMLNACADAKNV 221
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G ++ + + G + AL++++ KC + +A KVF + RD++ W ++I+G
Sbjct: 222 DKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGL 281
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR Q K +A ++F+ M+ G++PD+++ V
Sbjct: 282 ARHRQFK-------------------------------QACNLFQVMEEEGVQPDKVAFV 310
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L AC +LE G+ +H + L + AL+ MY KCG + A ++F+ + R
Sbjct: 311 SLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR 370
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+VVSW+ +I G A HG+ +A F++M + PN +TF+ +L AC+ +G
Sbjct: 371 NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIH 430
Query: 374 DSMKRDHHI-EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYS 432
D + + +I + ++ L+ + + G L A N+ E + K + W +++++ +
Sbjct: 431 DRIIKAGYITDDRVR--TALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAYVQHE 487
Query: 433 NLEIAVIAMEHLL 445
+ AV + LL
Sbjct: 488 KYDNAVATFQALL 500
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 189/419 (45%), Gaps = 51/419 (12%)
Query: 17 FVPILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L +C +N+ + ++ + IL F+ T +I++ G + A +F +
Sbjct: 208 FVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLP 267
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
++ + +MI + + A NL++ M + + PDK ++K+C
Sbjct: 268 RRDLITWTSMITGLARHRQFKQACNLFQVMEEEG-----VQPDKVAFVSLLKACNHPEAL 322
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK++HA + + GL + ALL +Y KC
Sbjct: 323 EQGKRVHARMKEVGLDTEIYVGTALLSMYTKC---------------------------- 354
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G M+ A +F+ + +VSWTAMI+G+ G EA F +M GIEP+ ++ +
Sbjct: 355 ---GSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFM 411
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+L AC++ +L+ G IH K + + AL+ MY KCG + A +F+++ ++
Sbjct: 412 SILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQ 471
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT-----GFWNE 368
+VV+W+ +I H K A+ F + + + P+ TF +L+ C G W +
Sbjct: 472 NVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQ 531
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
L+ + D HI + LV + G L A+N+ +MP + D W ++++
Sbjct: 532 SLIIRAGFESDLHIRN------ALVSMFVNCGDLMSAMNLFNDMPER-DLVSWNTIIAG 583
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 162/365 (44%), Gaps = 43/365 (11%)
Query: 9 SIKELEDRFVPILQSCE--NLIELKK-IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYA 65
IK F IL C+ + +EL K + + I++ + ++ + + GDL A
Sbjct: 503 GIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSA 562
Query: 66 SLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
LF + E ++ +N +I + + A + +K M S + PD+ T ++
Sbjct: 563 MNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQE-----SGVKPDQITFTGLLN 617
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+CA + G+++HA + + L + L+ +Y KC + +AH VF + +++ +
Sbjct: 618 ACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYS 677
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
W ++I+GYA+ G+ K EAL++F QMQ G+
Sbjct: 678 WTSMITGYAQHGRGK-------------------------------EALELFCQMQQEGV 706
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
+PD I+ V L ACA G ++ G ++ R +++++ + G +++A +
Sbjct: 707 KPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVE 766
Query: 306 LFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC-AHT 363
++M V+ D W ++G H A + ++L++ PND +LS A
Sbjct: 767 FINKMQVKPDSRLWGALLGACQVHLDVELAEKV--AQKKLELDPNDDGVYVILSNIYAAA 824
Query: 364 GFWNE 368
G W E
Sbjct: 825 GMWKE 829
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 36/301 (11%)
Query: 218 TAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK 277
A ++ + G +EA+ V + I+ + S+L C + +L GE IH +
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 278 NHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
+ + + N LI MY KCG N A Q+FD+M ++DV SW+ ++GG H + +A L
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF------------------------ 373
+M + V P+ TF+ +L+ACA ++G F
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252
Query: 374 -----DSMKRDHHIEHK-IEHYGCLVDLLGRAGRLDQALN---IIEEMPMKPDAKIWGSL 424
D++K +++ + + + ++ L R + QA N ++EE ++PD + SL
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312
Query: 425 LSSCRTYSNLEIA--VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKS 482
L +C LE V A + L+ E LLS +Y K G ED + L++ ++
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS-MYTKCGSMEDALEVFNLVKGRN 371
Query: 483 M 483
+
Sbjct: 372 V 372
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 278/506 (54%), Gaps = 37/506 (7%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+P + ENL K+IH I+++ +S FL + +ID ++ A +F Q +
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 405
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V ++ AMI Y +N LY ++ +++ +++ I P++ TL ++ LL LG
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-----ISPNEITLVSILPVIGILLALKLG 460
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+++H + K G + A++D+Y KC
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKC------------------------------- 489
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G+M A +F+++ IVSW +MI+ + + A+D+FRQM + GI D +SI + L
Sbjct: 490 GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA L S G+ IH + K+ L + LI+MY KCG + A +F M E+++V
Sbjct: 550 SACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV 609
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
SW+++I NHGK ++ LFHEM ++ + P+ ITF+ ++S+C H G +EG+ +F S
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRS 669
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M D+ I+ + EHY C+VDL GRAGRL +A ++ MP PDA +WG+LL +CR + N+E
Sbjct: 670 MTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVE 729
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A +A L+ L+P ++G YVL+SN +A WE V+++R L++ + ++K PG S IE+N
Sbjct: 730 LAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELL 521
FVSGD P I+ LL L
Sbjct: 790 KRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 177/376 (47%), Gaps = 38/376 (10%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G AS LF+ + + +N MI Y + L ++ + +M+ S +LPD T
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI-----SSGVLPDAIT 342
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
++ S + KQIH ++ + + +AL+D Y KC + A +F +
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D+V + TAMISGY H G Y ++L++FR
Sbjct: 403 SVDVVVF-------------------------------TAMISGYLHNGLYIDSLEMFRW 431
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
+ V I P+EI++VS+LP L +L+LG +H + K R I A+I+MY KCG
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+N A ++F+++ +RD+VSW+++I A AI +F +M + + ++ LSA
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA 551
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
CA+ + G M + H + + L+D+ + G L A+N+ + M K +
Sbjct: 552 CANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIV 609
Query: 420 IWGSLLSSCRTYSNLE 435
W S++++C + L+
Sbjct: 610 SWNSIIAACGNHGKLK 625
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 174/399 (43%), Gaps = 52/399 (13%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
F+ + +I G + S LF +V + + ++N M+ Y I + M D
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
I P+ T V+ CA L LG Q+H V G+ +N+LL +Y KC
Sbjct: 234 Q-----ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC- 287
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
G+ A LF M V+W MISGY
Sbjct: 288 ------------------------------GRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
G E+L F +M G+ PD I+ S+LP+ ++ +LE + IH Y ++ + +
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
+ALI+ Y KC ++ A +F Q DVV ++ +I G ++G ++ +F + ++K+
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH---IEHKIE---HYGC-LVDLLGRA 399
PN+IT + +L G++ + R+ H I+ + + GC ++D+ +
Sbjct: 438 SPNEITLVSILPVI--------GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC 489
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
GR++ A I E + K D W S+++ C N A+
Sbjct: 490 GRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAI 527
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 145/343 (42%), Gaps = 48/343 (13%)
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFT--LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ AI YK+ L R S L + L ++++C+ GKQ+HA + +
Sbjct: 10 FAPAIAPYKKSL-PLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISG 68
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDR--DIVAWNNLISGYARLGQMKKARMLFDK 208
S T+ +L +Y C + K+F + R I WN++IS + R G +
Sbjct: 69 DSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLN-------- 120
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+AL + +M G+ PD + ++ AC L + +
Sbjct: 121 -----------------------QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+++ + + ++LI+ Y++ G I+ S+LFD+++++D V W+ ++ G A
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT-----GFWNEGLMYFDSMKRDHHIE 383
G I F M+ ++ PN +TF +LS CA G GL+ + + I+
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ L+ + + GR D A + M + D W ++S
Sbjct: 278 NS------LLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMIS 313
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 274/501 (54%), Gaps = 49/501 (9%)
Query: 21 LQSCENLIELKKIHTQILKYL--LSQSNFLVTKMIDVCNSGG-----DLAYASLLFKQVK 73
L C +L L ++H +K L VT+++ +C G LAYA +F ++
Sbjct: 35 LPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIP 94
Query: 74 EP-NVFLYNAMIRAYTNNHLYGLAIN----LYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
P +V YN ++R Y G ++ +M+ + + PD +T ++K+CA
Sbjct: 95 HPGDVIWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEG-----VAPDTYTFVSLLKACA 149
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
G+Q H K G H L+++Y +C
Sbjct: 150 SARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAEC----------------------- 186
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
G ++ AR++FD+M +VS+ AMI+ EAL +FR+MQ G++P
Sbjct: 187 --------GDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPT 238
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++++SVL ACA LG+LELG WIH Y K L + ALI+MY KCG + A +F
Sbjct: 239 SVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQ 298
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M RD +WS ++ ANHG +AI +F EM++ + P+D+TF+G+L AC+H+G +E
Sbjct: 299 DMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSE 358
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
GL YFDSM R++ I I+HYGC+ DLL R+G+L++A I+E+P+KP A +W +LLS+C
Sbjct: 359 GLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSAC 417
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
+ ++++ E +L L+ G+YV+ SN+ A GRWE+++ +RKL+ K + K PG
Sbjct: 418 AGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPG 477
Query: 489 CSLIEVNNEVQEFVSGDDTKP 509
CS IE++N V EF +GD + P
Sbjct: 478 CSSIEIDNMVHEFFAGDGSHP 498
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 160/356 (44%), Gaps = 41/356 (11%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L++C + E ++ H +K ++ ++ +I++ GD+ A ++F ++
Sbjct: 141 FVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMD 200
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
V YNAMI A + L G A+ L+++M + P TL V+ +CA L
Sbjct: 201 GECVVSYNAMITASVRSSLPGEALVLFREM-----QAKGLKPTSVTLISVLSACALLGAL 255
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+ IH ++ K L S AL+D+Y KC L +A VF++M RD AW+ ++ Y
Sbjct: 256 ELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAY 315
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G + EA+ +F +M+ G++PD+++ +
Sbjct: 316 ANHGYGR-------------------------------EAISMFEEMKKQGMKPDDVTFL 344
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VE 312
VL AC+ G + G + ++ + ++ + G + +A + D++ ++
Sbjct: 345 GVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIK 404
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ W T++ A HG +F + L + ++ + CA+TG W E
Sbjct: 405 PTAILWRTLLSACAGHGDVDMGKRVFERILELD-DSHGGDYVIFSNLCANTGRWEE 459
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 280/486 (57%), Gaps = 43/486 (8%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
K+H ++LK + +++ C ++ L+YA +F + P+ F +N +IRA+ +
Sbjct: 6 KLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAHAD 65
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
+ K T + + PD FT PFV+K+CA L + GL
Sbjct: 66 SSPSFSLSLFSKM------TMAGVSPDHFTFPFVLKACARL--------------QTGLD 105
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
HS+ +F+ D D+ N LI Y G + A F++M
Sbjct: 106 LHSL--------------------LFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEM 145
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACAQLGSLELG 268
P +VSW++MI+ + G EAL +F++MQ+VG ++PDE+ ++SV+ A + LG LELG
Sbjct: 146 PERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELG 205
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+WI + +N L + AL++M+ +CGCI ++ ++FD+M ER+V++W+ +I GLA H
Sbjct: 206 KWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVH 265
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEH 388
G++ +A+ +F+EM+ P+ +TF G+L AC+H G +EG F+S++ ++ +E EH
Sbjct: 266 GRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEH 325
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLE 448
YGC+VDLLGRAG L++A ++ MP++P++ IW +LL +C ++ +E+A E + L+
Sbjct: 326 YGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELD 385
Query: 449 PEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
G+YVLLSN+Y GRW + + +R +R K + K PGCSLI VN+ + EFV+GD+
Sbjct: 386 SYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNH 445
Query: 509 PFLKDI 514
P + I
Sbjct: 446 PQFESI 451
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 160/366 (43%), Gaps = 44/366 (12%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
F +L++C L +H+ + K ++ +I G L +A F+++ E +
Sbjct: 90 FPFVLKACARLQTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERD 149
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +++MI + N A+ L+++M + + PD+ + V+ + + L LG
Sbjct: 150 LVSWSSMIACFAKNGFGYEALALFQRM----QLVGTVKPDEVIVLSVVSAISILGDLELG 205
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
K I + + GL+ AL+D++ +C + E+ +VF+EM +R+++ W LI+G A
Sbjct: 206 KWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVH 265
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G+ AEAL +F +M+ G +PD ++ VL
Sbjct: 266 GRS-------------------------------AEALRMFYEMRNHGFQPDHVTFTGVL 294
Query: 257 PACAQLGSLELGEWIHMYCDKNHL----LRRTVICNALIEMYIKCGCINQASQLFDQM-V 311
AC+ G + G W +N L C ++++ + G +N+A + D M +
Sbjct: 295 VACSHGGLVSEG-WHVFESIRNEYGMEPLPEHYGC--MVDLLGRAGLLNEACKFVDGMPI 351
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
+ + W T++G NH A + ++ L +D ++ L + G W E
Sbjct: 352 RPNSIIWRTLLGACVNHNYIELAEKVKEKINELD-SYHDGDYVLLSNVYGGVGRWAEKAG 410
Query: 372 YFDSMK 377
+SM+
Sbjct: 411 VRNSMR 416
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 284/510 (55%), Gaps = 41/510 (8%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSG--GDLAYASLLF 69
E + +L+ C N+ E K++H + +K L S+ + +SG + YA+ +F
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ + +P F +N MIR Y N + A+ Y +M++ PD FT P ++K+C
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNE-----PDNFTYPCLLKACTR 144
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L GKQIH V K GL++ D+ N+L
Sbjct: 145 LKSIREGKQIHGQVFKLGLEA-------------------------------DVFVQNSL 173
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPD 248
I+ Y R G+M+ + +F+K+ T SW++M+S +G ++E L +FR M ++ +
Sbjct: 174 INMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAE 233
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
E +VS L ACA G+L LG IH + +N ++ +L++MY+KCGC+++A +F
Sbjct: 234 ESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQ 293
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M +R+ +++S +I GLA HG+ A+ +F +M + + P+ + ++ +L+AC+H+G E
Sbjct: 294 KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKE 353
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G F M ++ +E EHYGCLVDLLGRAG L++AL I+ +P++ + IW + LS C
Sbjct: 354 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 413
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R N+E+ IA + LL L + G+Y+L+SN+Y++ W+DV+R R I K +K+TPG
Sbjct: 414 RVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPG 473
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
S++E+ + FVS D + P K+I+ +L
Sbjct: 474 FSIVELKGKTHRFVSQDRSHPKCKEIYKML 503
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 274/506 (54%), Gaps = 38/506 (7%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSN---FLVTKMIDVCNSGGDLAYASLLFKQVK 73
+P+L L + +H L+ L Q+ + T ++D+ L YA +F +
Sbjct: 207 LLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMT 266
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
N ++A+I + A NL+K ML + + ++ ++ CA L
Sbjct: 267 VRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVE----GMCFLSATSVASALRVCASLADL 322
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+G Q+HA + K G+ + D+ A N+L+S Y
Sbjct: 323 RMGTQLHALLAKSGIHA-------------------------------DLTAGNSLLSMY 351
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A+ G + +A MLFD++ +S+ A++SGY G EA VF++MQ ++PD ++V
Sbjct: 352 AKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMV 411
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S++PAC+ L +L+ G H L T ICN+LI+MY KCG I+ + Q+FD+M R
Sbjct: 412 SLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPAR 471
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+T+I G HG +A LF M+ P+D+TFI L++AC+H+G EG +F
Sbjct: 472 DIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWF 531
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
D+M + I ++EHY C+VDLL R G LD+A I+ MP+K D ++WG+LL +CR + N
Sbjct: 532 DTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKN 591
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+++ + L PE TGN+VLLSNI++ GR+++ + +R + + K KK+PGCS IE
Sbjct: 592 IDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIE 651
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
+N + FV GD + P DI+ L+
Sbjct: 652 INGSLHAFVGGDQSHPCSPDIYHELD 677
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 210/459 (45%), Gaps = 88/459 (19%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQML--RDPRTGSLILPDK 117
G LA A +F ++ P+ YNA+IRAY+ + AI+LY+ ML R P P+K
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVP-------PNK 99
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
+T PFV+K+C+ L G+ IHAH GL + AL+DLY +C A VF +
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
M RD+VAWN +++GYA G Y H + A LD+
Sbjct: 160 MPMRDVVAWNAMLAGYANHGM-------------------------YHH--AIAHLLDM- 191
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR---RTVICNALIEMY 294
G+ P+ ++VS+LP AQ G+L G +H YC + +L + + +I AL++MY
Sbjct: 192 --QDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMY 249
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM------------- 341
KC + A ++F M R+ V+WS +IGG + +A +LF +M
Sbjct: 250 AKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSV 309
Query: 342 -QRLKVPPN---------------------DITF-IGLLSACAHTGFWNEGLMYFDSMKR 378
L+V + D+T LLS A G NE M FD +
Sbjct: 310 ASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAI 369
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP---MKPDAKIWGSLLSSCRTYSNLE 435
I YG L+ + G+ ++A + ++M ++PD SL+ +C + L+
Sbjct: 370 KDTIS-----YGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQ 424
Query: 436 IAVIAMEHLLVLE-PEDTGNYVLLSNIYAKHGRWEDVSR 473
+ +++ +T L ++YAK GR D+SR
Sbjct: 425 HGRCSHGSVIIRGLALETSICNSLIDMYAKCGRI-DLSR 462
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 192/419 (45%), Gaps = 46/419 (10%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F +L++C L +L + IH L F+ T +ID+ A+ +F ++
Sbjct: 102 FPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP 161
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +NAM+ Y N+ +Y AI L D + + P+ TL ++ A
Sbjct: 162 MRDVVAWNAMLAGYANHGMYHHAI----AHLLDMQDRGGLRPNASTLVSLLPLLAQHGAL 217
Query: 134 SLGKQIHAHVCKFGLKSHS---ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G +HA+ + L + + ALLD+Y KC L+ A +VF MT R+ V W+ LI
Sbjct: 218 FQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALI 277
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI-EPDE 249
G+ +L D+M EA ++F+ M + G+
Sbjct: 278 GGF----------VLCDRM---------------------TEAFNLFKDMLVEGMCFLSA 306
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
S+ S L CA L L +G +H K+ + N+L+ MY K G IN+A+ LFD+
Sbjct: 307 TSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDE 366
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
+ +D +S+ ++ G +GKA +A +F +MQ V P+ T + L+ AC+H G
Sbjct: 367 IAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHG 426
Query: 370 LMYFDS-MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
S + R +E I L+D+ + GR+D + + ++MP + D W ++++
Sbjct: 427 RCSHGSVIIRGLALETSI--CNSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAG 482
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 4/250 (1%)
Query: 181 RDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM 240
+D W + + GQ+ AR +FD++P ++ A+I Y+ G + A+D++R M
Sbjct: 31 KDNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSM 90
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ P++ + VL AC+ L L G IH + L + ALI++YI+C
Sbjct: 91 LYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARF 150
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI-HLFHEMQRLKVPPNDITFIGLLSA 359
A+ +F +M RDVV+W+ ++ G ANHG H AI HL R + PN T + LL
Sbjct: 151 GPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPL 210
Query: 360 CAHTGFWNEGLMYFDSMKRDH--HIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPD 417
A G +G R + E ++ L+D+ + L A + M ++ +
Sbjct: 211 LAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNE 270
Query: 418 AKIWGSLLSS 427
W +L+
Sbjct: 271 VT-WSALIGG 279
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 274/501 (54%), Gaps = 49/501 (9%)
Query: 21 LQSCENLIELKKIHTQILKYL--LSQSNFLVTKMIDVCNSGG-----DLAYASLLFKQVK 73
L C +L L ++H +K L VT+++ +C G LAYA +F ++
Sbjct: 35 LPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIP 94
Query: 74 EP-NVFLYNAMIRAYTNNHLYGLAIN----LYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
P +V YN ++R Y G ++ +M+ + + PD +T ++K+CA
Sbjct: 95 HPGDVVWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEG-----VAPDTYTFVSLLKACA 149
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
G+Q H K G H L+++Y +C
Sbjct: 150 SARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAEC----------------------- 186
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
G ++ AR++FD+M +VS+ AMI+ EAL +FR+MQ G++P
Sbjct: 187 --------GDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPT 238
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
++++SVL ACA LG+LELG WIH Y K L + ALI+MY KCG + A +F
Sbjct: 239 SVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQ 298
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
M RD +WS ++ ANHG +AI +F EM++ + P+D+TF+G+L AC+H+G +E
Sbjct: 299 DMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSE 358
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
GL YFDSM R++ I I+HYGC+ DLL R+G+L++A I+E+P+KP A +W +LLS+C
Sbjct: 359 GLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSAC 417
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
+ ++++ E +L L+ G+YV+ SN+ A GRWE+++ +RKL+ K + K PG
Sbjct: 418 AGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPG 477
Query: 489 CSLIEVNNEVQEFVSGDDTKP 509
CS IE++N V EF +GD + P
Sbjct: 478 CSSIEIDNMVHEFFAGDGSHP 498
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 160/356 (44%), Gaps = 41/356 (11%)
Query: 17 FVPILQSCENLI---ELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
FV +L++C + E ++ H +K ++ ++ +I++ GD+ A ++F ++
Sbjct: 141 FVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMD 200
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
V YNAMI A + L G A+ L+++M + P TL V+ +CA L
Sbjct: 201 GECVVSYNAMITASVRSSLPGEALVLFREM-----QAKGLKPTSVTLISVLSACALLGAL 255
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
LG+ IH ++ K L S AL+D+Y KC L +A VF++M RD AW+ ++ Y
Sbjct: 256 ELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAY 315
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
A G + EA+ +F +M+ G++PD+++ +
Sbjct: 316 ANHGYGR-------------------------------EAISMFEEMKKQGMKPDDVTFL 344
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VE 312
VL AC+ G + G + ++ + ++ + G + +A + D++ ++
Sbjct: 345 GVLYACSHSGMVSEGLQYFDSMREYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIK 404
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ W T++ A HG +F + L + ++ + CA+TG W E
Sbjct: 405 PTAILWRTLLSACAGHGDVDMGKRVFERILELD-DSHGGDYVIFSNLCANTGRWEE 459
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 283/529 (53%), Gaps = 52/529 (9%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
V +L +C N+ L + +H +K S ++D+ + G+L A+ +F ++
Sbjct: 262 LVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMG 321
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E + + ++I A+ L+ AI L+ +M + PD + + V+ +CA
Sbjct: 322 ETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKG-----LRPDIYAVTSVVHACACSNSL 376
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+++H H+ K + S+ NAL+++Y KC
Sbjct: 377 DKGREVHNHIKKNNMGSNLPVSNALMNMYAKC---------------------------- 408
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
G M++A ++F ++P IVSW MI GY+ EAL +F MQ ++PD++++
Sbjct: 409 ---GSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMA 464
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRT------VICNALIEMYIKCGCINQASQLF 307
VLPACA L +LE G IH H+LR+ V C AL++MY+KCG + A QLF
Sbjct: 465 CVLPACAGLAALEKGREIH-----GHILRKGYFSDLHVAC-ALVDMYVKCGLLVLAQQLF 518
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D + ++D++ W+ +I G HG +AI F +M+ + P + +F +L AC H+G
Sbjct: 519 DMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLK 578
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EG FDSMK + +IE K+EHY C+VDLL R+G L +A IE MP+KPDA IWG+LLS
Sbjct: 579 EGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSG 638
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
CR + ++E+A EH+ LEPE+T YVLL+N+YA+ +WE+V ++++ I +K
Sbjct: 639 CRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQ 698
Query: 488 GCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
GCS IEV + F +GD + P K I LL L + +R I Y
Sbjct: 699 GCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRGGYSNKIKY 747
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 204/408 (50%), Gaps = 41/408 (10%)
Query: 12 ELE-DRFVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASL 67
ELE + + +LQ C L L K++H+ I ++ L K++ + + GDL
Sbjct: 54 ELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRR 113
Query: 68 LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSC 127
+F + +FL+N ++ Y Y ++ L+++M G D +T V+K
Sbjct: 114 IFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRG-----DSYTFTCVLKGF 168
Query: 128 AGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWN 187
A K++H +V K G S++ N+L+ Y KC E+ A +F+E++DRD+V+WN
Sbjct: 169 AASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWN 228
Query: 188 NLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEP 247
++ISG ++G++ G L+ F QM +G++
Sbjct: 229 SMISG--------------------------CTMNGFSRNG-----LEFFIQMLNLGVDV 257
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D ++V+VL ACA +G+L LG +H Y K + N L++MY KCG +N A+++F
Sbjct: 258 DSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVF 317
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
+M E +VSW+++I G ++AI LF EMQ + P+ ++ ACA + +
Sbjct: 318 VKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLD 377
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
+G + +K++ ++ + L+++ + G +++A I ++P+K
Sbjct: 378 KGREVHNHIKKN-NMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK 424
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 283/518 (54%), Gaps = 41/518 (7%)
Query: 7 ALSIKELE-DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG--DLA 63
++S E + + +++SC + +L +IH I+ Q + + + S DL
Sbjct: 19 SISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLG 78
Query: 64 YASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFV 123
Y+ LF + P V YNAM+RAY+ + + +Y+ M R + D + F
Sbjct: 79 YSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQG-----VRADPLSSSFA 133
Query: 124 IKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDI 183
+KSC LL G QIHA + G ++ S+ +++DLY C
Sbjct: 134 VKSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHC------------------ 175
Query: 184 VAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV 243
G+ ++A LFD++P +V+W +IS T +AL +F MQ
Sbjct: 176 -------------GKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSP 222
Query: 244 G--IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
+PD+++ + +L ACA L +LE GE IH Y ++ + +CN+LI MY +CG ++
Sbjct: 223 TYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMD 282
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA 361
+A ++FD+M E++VVSWS +I GL+ +G +AI F EMQ+ V P D TF +LSAC+
Sbjct: 283 KAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACS 342
Query: 362 HTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIW 421
H G +EG+ +FD M+++ I + HYGC+VDLLGRAG LDQA +I M ++PDA +W
Sbjct: 343 HCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMW 402
Query: 422 GSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSK 481
+LL +CR + + + +EHL+ L+ ++ G+YVLL NIY+ G W+ V+ +RKL++ K
Sbjct: 403 RTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEK 462
Query: 482 SMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
+ TP C+ IE+N V +F D + P I+ L+
Sbjct: 463 GIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLD 500
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 267/490 (54%), Gaps = 36/490 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNV 77
+P L+ LK+IH ++ + + + L A +F ++ V
Sbjct: 408 LPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTV 467
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
+NA+I A+ N G +++L+ M+ S + PD+FT+ ++ +CA L GK
Sbjct: 468 SSWNALIGAHAQNGFPGKSLDLFLVMMD-----SGMDPDRFTIGSLLLACARLKFLRCGK 522
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
+IH + + GL+ +L+ LY +C ++ +F++M ++ +V WN +I+G+++
Sbjct: 523 EIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQ-- 580
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+++P EALD FRQM GI+P EI++ VL
Sbjct: 581 ---------NELP--------------------CEALDTFRQMLSGGIKPQEIAVTGVLG 611
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
AC+Q+ +L LG+ +H + K HL + ALI+MY KCGC+ Q+ +FD++ E+D
Sbjct: 612 ACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAV 671
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G HG KAI LF MQ P+ TF+G+L AC H G EGL Y M+
Sbjct: 672 WNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQ 731
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
+ ++ K+EHY C+VD+LGRAG+L +AL ++ EMP +PD+ IW SLLSSCR Y +LEI
Sbjct: 732 NLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIG 791
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
+ LL LEP NYVLLSN+YA G+W++V ++R+ ++ + K GCS IE+
Sbjct: 792 EEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGM 851
Query: 498 VQEFVSGDDT 507
V F+ D +
Sbjct: 852 VYRFLVSDGS 861
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 190/368 (51%), Gaps = 44/368 (11%)
Query: 3 ARIGALSIKELEDRFVPIL-QSC---ENLIELKKIHTQI-LKYLLSQSNFLVTKMIDVCN 57
A+ G +S ++ + IL ++C +N+ +K+H + + L L T++I + +
Sbjct: 80 AQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYS 139
Query: 58 SGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDK 117
+ G + + +F KE ++FLYNA++ Y+ N L+ AI+L+ ++L + + + PD
Sbjct: 140 ACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELL----SATDLAPDN 195
Query: 118 FTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE 177
FTLP V K+CAG+ LG+ +HA K G S + NAL+ +YGKC
Sbjct: 196 FTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKC------------ 243
Query: 178 MTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
G ++ A +F+ M +VSW +++ + G + E VF
Sbjct: 244 -------------------GFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVF 284
Query: 238 RQM---QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+++ + G+ PD ++V+V+PACA +G + +G +H K + + N+L++MY
Sbjct: 285 KRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMY 344
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR-LKVPPNDITF 353
KCG + +A LFD ++VVSW+T+I G + G L EMQR KV N++T
Sbjct: 345 SKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTV 404
Query: 354 IGLLSACA 361
+ +L AC+
Sbjct: 405 LNVLPACS 412
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 169/372 (45%), Gaps = 42/372 (11%)
Query: 20 ILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ ++C + +++ +H LK F+ +I + G + A +F+ ++ N
Sbjct: 201 VAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRN 260
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+ +N+++ A + N +G ++K++L G ++PD T+ VI +CA + +G
Sbjct: 261 LVSWNSVMYACSENGGFGECCGVFKRLLISEEEG--LVPDVATMVTVIPACAAVGEVRMG 318
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+H K G+ N+L+D+Y KC
Sbjct: 319 MVVHGLAFKLGITEEVTVNNSLVDMYSKC------------------------------- 347
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV-GIEPDEISIVSV 255
G + +AR LFD +VSW +I GY+ G + ++ ++MQ + +E+++++V
Sbjct: 348 GYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNV 407
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
LPAC+ L + IH Y ++ L+ ++ NA + Y KC ++ A ++F M + V
Sbjct: 408 LPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTV 467
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN-----EGL 370
SW+ +IG A +G K++ LF M + P+ T LL ACA F G
Sbjct: 468 SSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGF 527
Query: 371 MYFDSMKRDHHI 382
M + ++ D I
Sbjct: 528 MLRNGLELDEFI 539
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 162/368 (44%), Gaps = 58/368 (15%)
Query: 15 DRFV--PILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLF 69
DRF +L +C L L K+IH +L+ L F+ ++ + + L+F
Sbjct: 501 DRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIF 560
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+++ ++ +N MI ++ N L A++ ++QML I P + + V+ +C+
Sbjct: 561 DKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGG-----IKPQEIAVTGVLGACSQ 615
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
+ LGK++H+ K L + AL+D+Y KC + ++ +F+ + ++D WN +
Sbjct: 616 VSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVI 675
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
I+GY G K A+++F MQ G PD
Sbjct: 676 IAGYGIHGHGLK-------------------------------AIELFELMQNKGGRPDS 704
Query: 250 ISIVSVLPACAQLGSLE-----LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ + VL AC G + LG+ ++Y K L + ++M + G + +A
Sbjct: 705 FTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACV----VDMLGRAGQLTEAL 760
Query: 305 QLFDQMV-ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR--LKVPPNDITFIGLLSAC- 360
+L ++M E D WS+++ N+G + + E+ + L++ PN LLS
Sbjct: 761 KLVNEMPDEPDSGIWSSLLSSCRNYGD----LEIGEEVSKKLLELEPNKAENYVLLSNLY 816
Query: 361 AHTGFWNE 368
A G W+E
Sbjct: 817 AGLGKWDE 824
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 9/249 (3%)
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM- 240
D+V +I+ Y+ G +R +FD + + A++SGY+ + +A+ +F ++
Sbjct: 127 DVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELL 186
Query: 241 QMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCI 300
+ PD ++ V ACA + +ELGE +H K + NALI MY KCG +
Sbjct: 187 SATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFV 246
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM---QRLKVPPNDITFIGLL 357
A ++F+ M R++VSW++V+ + +G + +F + + + P+ T + ++
Sbjct: 247 ESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVI 306
Query: 358 SACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP- 416
ACA G G M + I ++ LVD+ + G L +A + + K
Sbjct: 307 PACAAVGEVRMG-MVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNV 365
Query: 417 ---DAKIWG 422
+ IWG
Sbjct: 366 VSWNTIIWG 374
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/518 (33%), Positives = 294/518 (56%), Gaps = 17/518 (3%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK- 73
+ V + + C ++ KI LK+ + T ++ C SG D++ A LF +
Sbjct: 336 NALVDVYRRCGDMGGAAKI---FLKFSVKNVLSCNTMIVGYCESG-DVSKAKELFDCMDV 391
Query: 74 ---EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
E + +N++I Y N ++ A ++++ ML + I PD FTL V+ +CA
Sbjct: 392 LGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEG----IEPDSFTLGSVLTACADT 447
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
+ GK+IHA GL+S + AL+++Y KC +L A F+E+ ++D+ WN LI
Sbjct: 448 ISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALI 507
Query: 191 SGYARLGQMKKARMLFDKMP----YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246
SGY R Q+++ + L +KM + I +W ++++G + +F +MQ+ +
Sbjct: 508 SGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLR 567
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
PD ++ +LPAC++L +LE G+ H + K I AL++MY KCG + A
Sbjct: 568 PDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLA 627
Query: 307 FDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
+D++ ++VS + ++ A HG + I LF M L P+ +TF+ +LS+C H G
Sbjct: 628 YDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSV 687
Query: 367 NEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
G +FD M ++++ ++HY +VDLL R+G+L +A +I++MP++ D+ +WG+LL
Sbjct: 688 ETGCEFFDLMGY-YNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLG 746
Query: 427 SCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKT 486
C T+ N+E+ IA E L+ LEP ++GNYVLL+N++A RW D++R+R +++ + M K+
Sbjct: 747 GCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMHKS 806
Query: 487 PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
PGCS IE NE+ F++ D + ++I+ L+ LALH
Sbjct: 807 PGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLALH 844
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 223/440 (50%), Gaps = 17/440 (3%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
++ +L SC+ K++H +K F+ TK++ + G L A LF+ +
Sbjct: 64 KYASVLDSCKCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMR 123
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
N+ + A++ Y ++ L+ A L++ + D + D F P V K+C+GL L
Sbjct: 124 NLHSWKAILSVYLDHGLFEEAFLLFQVLQFDG-----VELDFFVFPLVFKACSGLGSVEL 178
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+Q+H V KF + NAL+D+YGKC L +A KV +M +RD V WN++I+ A
Sbjct: 179 GRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAA 238
Query: 196 LGQMKKARMLFDKM-----PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
G + +A +KM +VSW+A+I G+ G EA+++ +MQ+ G+ P+
Sbjct: 239 NGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQ 298
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++ VLPACA+L L+LG+ +H Y ++ + V+ NAL+++Y +CG + A+++F +
Sbjct: 299 TLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKF 358
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
++V+S +T+I G G KA LF M L + I++ ++S ++E
Sbjct: 359 SVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAF 418
Query: 371 MYFDSMKRDHHIEHKIEHYG-----CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
F +M + IE G C + R G+ A I++ ++ D + G+L+
Sbjct: 419 SMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVK--GLQSDTFVGGALV 476
Query: 426 SSCRTYSNLEIAVIAMEHLL 445
+L A +A + ++
Sbjct: 477 EMYSKCQDLTAAQVAFDEVM 496
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,484,964,860
Number of Sequences: 23463169
Number of extensions: 347909189
Number of successful extensions: 906641
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8325
Number of HSP's successfully gapped in prelim test: 3253
Number of HSP's that attempted gapping in prelim test: 741131
Number of HSP's gapped (non-prelim): 55813
length of query: 541
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 393
effective length of database: 8,886,646,355
effective search space: 3492452017515
effective search space used: 3492452017515
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)