BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048358
(541 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/524 (62%), Positives = 417/524 (79%), Gaps = 6/524 (1%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLL 68
I+E+E+ F+P LQ ++ E KKI+ I+ + LSQS+F+VTKM+D C+ D+ YA+ L
Sbjct: 5 GIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRL 64
Query: 69 FKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCA 128
F QV PNVFLYN++IRAYT+N LY I +YKQ+LR S LPD+FT PF+ KSCA
Sbjct: 65 FNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRK----SFELPDRFTFPFMFKSCA 120
Query: 129 GLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNN 188
L LGKQ+H H+CKFG + H +TENAL+D+Y K D+L++AHKVF+EM +RD+++WN+
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 189 LISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248
L+SGYARLGQMKKA+ LF M TIVSWTAMISGYT IG Y EA+D FR+MQ+ GIEPD
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
EIS++SVLP+CAQLGSLELG+WIH+Y ++ L++T +CNALIEMY KCG I+QA QLF
Sbjct: 241 EISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG 300
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
QM +DV+SWST+I G A HG AH AI F+EMQR KV PN ITF+GLLSAC+H G W E
Sbjct: 301 QMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQE 360
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
GL YFD M++D+ IE KIEHYGCL+D+L RAG+L++A+ I + MPMKPD+KIWGSLLSSC
Sbjct: 361 GLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSC 420
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
RT NL++A++AM+HL+ LEPED GNYVLL+NIYA G+WEDVSR+RK+IR+++MKKTPG
Sbjct: 421 RTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG 480
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVI 532
SLIEVNN VQEFVSGD++KPF +I +L+L HQD +DVI
Sbjct: 481 GSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQD--QDVI 522
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 316/498 (63%), Gaps = 12/498 (2%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD-------LAYASLLFK 70
+ +LQSC + +LK IH +L+ L F+ ++++ +C L YA +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
Q++ PN+F++N +IR ++ A Y QML+ S I PD T PF+IK+ + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK-----SRIWPDNITFPFLIKASSEM 130
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
C +G+Q H+ + +FG ++ EN+L+ +Y C + A ++F +M RD+V+W +++
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+GY + G ++ AR +FD+MP+ + +W+ MI+GY + +A+D+F M+ G+ +E
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+VSV+ +CA LG+LE GE + Y K+H+ ++ AL++M+ +CG I +A +F+ +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
E D +SWS++I GLA HG AHKA+H F +M L P D+TF +LSAC+H G +GL
Sbjct: 311 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+++MK+DH IE ++EHYGC+VD+LGRAG+L +A N I +M +KP+A I G+LL +C+
Sbjct: 371 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKI 430
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
Y N E+A L+ ++PE +G YVLLSNIYA G+W+ + +R +++ K +KK PG S
Sbjct: 431 YKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
Query: 491 LIEVNNEVQEFVSGDDTK 508
LIE++ ++ +F GDD K
Sbjct: 491 LIEIDGKINKFTMGDDQK 508
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/530 (40%), Positives = 325/530 (61%), Gaps = 11/530 (2%)
Query: 1 MAARIGALSIKELEDRFVPILQ-SCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG 59
M RI ALS+ + FV L+ NL LK+ H ++ L++ N V K I+ C++
Sbjct: 1 MIQRINALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNA 60
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYT---NNHLYGLAINLYKQMLRDPRTGSLILPD 116
G L YA +F PN +L+N MIRA + + + +AI +Y+++ PD
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLW-----ALCAKPD 115
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
FT PFV+K + G+QIH V FG S L+ +Y C L +A K+F+
Sbjct: 116 TFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFD 175
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP--YTTIVSWTAMISGYTHIGSYAEAL 234
EM +D+ WN L++GY ++G+M +AR L + MP VSWT +ISGY G +EA+
Sbjct: 176 EMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAI 235
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMY 294
+VF++M M +EPDE+++++VL ACA LGSLELGE I Y D + R + NA+I+MY
Sbjct: 236 EVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMY 295
Query: 295 IKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFI 354
K G I +A +F+ + ER+VV+W+T+I GLA HG +A+ +F+ M + V PND+TFI
Sbjct: 296 AKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFI 355
Query: 355 GLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPM 414
+LSAC+H G+ + G F+SM+ + I IEHYGC++DLLGRAG+L +A +I+ MP
Sbjct: 356 AILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPF 415
Query: 415 KPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRM 474
K +A IWGSLL++ + +LE+ A+ L+ LEP ++GNY+LL+N+Y+ GRW++ M
Sbjct: 416 KANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMM 475
Query: 475 RKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALH 524
R +++ +KK G S IEV N V +F+SGD T P ++ I +L+ + L
Sbjct: 476 RNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQ 525
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/519 (38%), Positives = 318/519 (61%), Gaps = 9/519 (1%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ +L+SC+N+ + IH +I++ Q F+V ++I VC++ + YA +F V PN
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V+LY AMI + ++ ++LY +M+ + +LPD + + V+K+C +C
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNS-----VLPDNYVITSVLKACDLKVC---- 142
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
++IHA V K G S ++++YGK EL+ A K+F+EM DRD VA +I+ Y+
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G +K+A LF + V WTAMI G +AL++FR+MQM + +E + V VL
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+ LG+LELG W+H + + + + NALI MY +CG IN+A ++F M ++DV+
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 322
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
S++T+I GLA HG + +AI+ F +M PN +T + LL+AC+H G + GL F+SM
Sbjct: 323 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEI 436
KR ++E +IEHYGC+VDLLGR GRL++A IE +P++PD + G+LLS+C+ + N+E+
Sbjct: 383 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMEL 442
Query: 437 AVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNN 496
+ L E D+G YVLLSN+YA G+W++ + +R+ +R ++K PGCS IEV+N
Sbjct: 443 GEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDN 502
Query: 497 EVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIM 535
++ EF+ GD P + I+ L+ L ++ IDI+
Sbjct: 503 QIHEFLVGDIAHPHKEAIYQRLQELNRILRFKENQIDII 541
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 144/324 (44%), Gaps = 13/324 (4%)
Query: 105 RDPRTGSLILPDKFTLPFVIKSCAGLL-CPSLGKQIHAHVCKFGLKSHSITENALLDLYG 163
RDP + +L L + TL V++SC + PS IHA + + + L+ +
Sbjct: 17 RDPDSNTLRLSRRKTLISVLRSCKNIAHVPS----IHAKIIRTFHDQDAFVVFELIRVCS 72
Query: 164 KCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISG 223
D + A+ VF +++ ++ + +I G+ G+ L+ +M + +++ +I+
Sbjct: 73 TLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITS 132
Query: 224 YTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSL-ELGEWIHMYCDKNHLLR 282
++ Q+ +G + ++ + G L + D++H
Sbjct: 133 VLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDH--- 189
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
V +I Y +CG I +A +LF + +D V W+ +I GL + + +KA+ LF EMQ
Sbjct: 190 --VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQ 247
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
V N+ T + +LSAC+ G G + S + +E L+++ R G +
Sbjct: 248 MENVSANEFTAVCVLSACSDLGALELG-RWVHSFVENQRMELSNFVGNALINMYSRCGDI 306
Query: 403 DQALNIIEEMPMKPDAKIWGSLLS 426
++A + M K D + +++S
Sbjct: 307 NEARRVFRVMRDK-DVISYNTMIS 329
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/510 (38%), Positives = 314/510 (61%), Gaps = 8/510 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
KK+H ++K+ L + ++ ++ + + G + A +F + + +VF +N MI Y
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
Y +I L +M R+ L+ P TL V+ +C+ + L K++H +V + +
Sbjct: 215 KEYEESIELLVEMERN-----LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
ENAL++ Y C E+ A ++F M RD+++W +++ GY G +K AR FD+MP
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEW 270
+SWT MI GY G + E+L++FR+MQ G+ PDE ++VSVL ACA LGSLE+GEW
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 271 IHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGK 330
I Y DKN + V+ NALI+MY KCGC +A ++F M +RD +W+ ++ GLAN+G+
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 331 AHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG 390
+AI +F +MQ + + P+DIT++G+LSAC H+G ++ +F M+ DH IE + HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
C+VD+LGRAG + +A I+ +MPM P++ +WG+LL + R +++ +A +A + +L LEP+
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 451 DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPF 510
+ Y LL NIYA RW+D+ +R+ I ++KKTPG SLIEVN EFV+GD +
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQ 629
Query: 511 LKDIFWLLELLALHQDRAK---DVIDIMYE 537
++I+ LE LA A D ++++E
Sbjct: 630 SEEIYMKLEELAQESTFAAYLPDTSELLFE 659
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 208/457 (45%), Gaps = 84/457 (18%)
Query: 9 SIKELEDRFVPILQSCENLIELKKIHTQ-ILKYLLSQSNFLVTKMIDVCNS-GGDLAYAS 66
SI RF+ IL C+ + K++H+Q I + + F + C+ GG ++YA
Sbjct: 29 SISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAY 88
Query: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVI-- 124
LF ++ EP+V ++N MI+ ++ G + LY ML++ T PD T PF++
Sbjct: 89 KLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVT-----PDSHTFPFLLNG 143
Query: 125 --KSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRD 182
+ L C GK++H HV KFGL S+ +NAL+ +Y C + A VF+ D
Sbjct: 144 LKRDGGALAC---GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 183 IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM 242
+ +WN +ISGY R+ + Y E++++ +M+
Sbjct: 201 VFSWNLMISGYNRMKE-------------------------------YEESIELLVEMER 229
Query: 243 VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQ 302
+ P ++++ VL AC+++ +L + +H Y + + NAL+ Y CG ++
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDI 289
Query: 303 ASQLFDQMVERDVVSWSTVIGGLANHGKA------------------------------- 331
A ++F M RDV+SW++++ G G
Sbjct: 290 AVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCF 349
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG---LMYFDSMKRDHHIEHKIEH 388
++++ +F EMQ + P++ T + +L+ACAH G G Y D K I++ +
Sbjct: 350 NESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK----IKNDVVV 405
Query: 389 YGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
L+D+ + G ++A + +M + D W +++
Sbjct: 406 GNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMV 441
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 18/294 (6%)
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + A LF K+P +V W MI G++ + E + ++ M G+ PD + +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 257 PACAQ-LGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ G+L G+ +H + K L + NAL++MY CG ++ A +FD+ + DV
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
SW+ +I G + ++I L EM+R V P +T + +LSAC+ + D
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK-------VKDKDL 254
Query: 376 MKRDHH------IEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
KR H E + LV+ G +D A+ I M + D W S++
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYV 313
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
NL++A + + V D ++ ++ + Y + G + + + + ++S M
Sbjct: 314 ERGNLKLARTYFDQMPV---RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/520 (39%), Positives = 309/520 (59%), Gaps = 24/520 (4%)
Query: 19 PILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGG----DLAYASLLFKQVKE 74
P + +C + +L +IH +K + +++ C + DL YA +F Q+ +
Sbjct: 28 PQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 87
Query: 75 PNVFLYNAMIRAYTNNHLYG--LAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
N F +N +IR ++ + +AI L+ +M+ D + P++FT P V+K+CA
Sbjct: 88 RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSD----EFVEPNRFTFPSVLKACAKTGK 143
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEE---------MTDR-- 181
GKQIH K+G + L+ +Y C + +A +F + MTDR
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203
Query: 182 ---DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+IV WN +I GY RLG K ARMLFDKM ++VSW MISGY+ G + +A++VFR
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+M+ I P+ +++VSVLPA ++LGSLELGEW+H+Y + + + V+ +ALI+MY KCG
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
I +A +F+++ +V++WS +I G A HG+A AI F +M++ V P+D+ +I LL+
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDA 418
AC+H G EG YF M +E +IEHYGC+VDLLGR+G LD+A I MP+KPD
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 419 KIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLI 478
IW +LL +CR N+E+ L+ + P D+G YV LSN+YA G W +VS MR +
Sbjct: 444 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 503
Query: 479 RSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
+ K ++K PGCSLI+++ + EFV DD+ P K+I +L
Sbjct: 504 KEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/497 (38%), Positives = 299/497 (60%), Gaps = 8/497 (1%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPNV 77
LQ C ELK+IH ++LK L Q ++ +TK + C S L YA ++F P+
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
FL+N MIR ++ + ++ LY++ML S + +T P ++K+C+ L
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRML-----CSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
QIHA + K G ++ N+L++ Y AH +F+ + + D V+WN++I GY + G
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
+M A LF KM +SWT MISGY EAL +F +MQ +EPD +S+ + L
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 255
Query: 258 ACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVS 317
ACAQLG+LE G+WIH Y +K + +V+ LI+MY KCG + +A ++F + ++ V +
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 315
Query: 318 WSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMK 377
W+ +I G A HG +AI F EMQ++ + PN ITF +L+AC++TG EG + F SM+
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 378 RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIA 437
RD++++ IEHYGC+VDLLGRAG LD+A I+EMP+KP+A IWG+LL +CR + N+E+
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 438 VIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
E L+ ++P G YV +NI+A +W+ + R+L++ + + K PGCS I +
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 495
Query: 498 VQEFVSGDDTKPFLKDI 514
EF++GD + P ++ I
Sbjct: 496 THEFLAGDRSHPEIEKI 512
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/539 (35%), Positives = 305/539 (56%), Gaps = 42/539 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
+L + ++ L+ +H++I+ L ++ L K++ S D+A A +F ++ E NV +
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
N MIR+Y NN YG + ++ M G + PD +T P V+K+C+ +G++I
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTM-----CGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQM 199
H K GL S N L+ +YGKC L EA V +EM+ RD+V+WN+L+ GYA+ +
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222
Query: 200 KKA-------------------------------------RMLFDKMPYTTIVSWTAMIS 222
A + +F KM ++VSW MI
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG 282
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
Y EA++++ +M+ G EPD +SI SVLPAC +L LG+ IH Y ++ L+
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
++ NALI+MY KCGC+ +A +F+ M RDVVSW+ +I G+ A+ LF ++Q
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+ P+ I F+ L+AC+H G EG F M + I ++EH C+VDLLGRAG++
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIY 462
+A I++M M+P+ ++WG+LL +CR +S+ +I ++A + L L PE +G YVLLSNIY
Sbjct: 463 KEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIY 522
Query: 463 AKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
AK GRWE+V+ +R +++SK +KK PG S +EVN + F+ GD + P +I+ L++L
Sbjct: 523 AKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVL 581
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/499 (38%), Positives = 307/499 (61%), Gaps = 4/499 (0%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC-NSGGDLAYASLLFKQVKEPNVFLYNA 82
C + ELK+IH ++K L ++++ C S D+ YA L+F ++ N F++N
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
+IR ++ + +AI+++ ML + + P + T P V K+ L G+Q+H
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPS---VKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 143 VCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKA 202
V K GL+ S N +L +Y C LIEA ++F M D+VAWN++I G+A+ G + +A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 203 RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
+ LFD+MP VSW +MISG+ G + +ALD+FR+MQ ++PD ++VS+L ACA L
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 263 GSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVI 322
G+ E G WIH Y +N +++ ALI+MY KCGCI + +F+ ++ + W+++I
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
GLAN+G +A+ LF E++R + P+ ++FIG+L+ACAH+G + +F MK + I
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAME 442
E I+HY +V++LG AG L++A +I+ MP++ D IW SLLS+CR N+E+A A +
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451
Query: 443 HLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFV 502
L L+P++T YVLLSN YA +G +E+ R L++ + M+K GCS IEV+ EV EF+
Sbjct: 452 CLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFI 511
Query: 503 SGDDTKPFLKDIFWLLELL 521
S T P +I+ LL++L
Sbjct: 512 SCGGTHPKSAEIYSLLDIL 530
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/531 (37%), Positives = 311/531 (58%), Gaps = 15/531 (2%)
Query: 14 EDRFVPILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFK 70
E F +L +C L ++ K +H+ I K ++ + ++D+ + G++ A +F
Sbjct: 152 EYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD 211
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ + NV +N++I + N A+++++ ML S + PD+ TL VI +CA L
Sbjct: 212 EMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE-----SRVEPDEVTLASVISACASL 266
Query: 131 LCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
+G+++H V K L++ I NA +D+Y KC + EA +F+ M R+++A ++
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
ISGYA K AR++F KM +VSW A+I+GYT G EAL +F ++ + P
Sbjct: 327 ISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT------VICNALIEMYIKCGCINQA 303
S ++L ACA L L LG H++ K+ ++ + N+LI+MY+KCGC+ +
Sbjct: 387 YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT 363
+F +M+ERD VSW+ +I G A +G ++A+ LF EM P+ IT IG+LSAC H
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
Query: 364 GFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGS 423
GF EG YF SM RD + +HY C+VDLLGRAG L++A ++IEEMPM+PD+ IWGS
Sbjct: 507 GFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGS 566
Query: 424 LLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSM 483
LL++C+ + N+ + E LL +EP ++G YVLLSN+YA+ G+WEDV +RK +R + +
Sbjct: 567 LLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGV 626
Query: 484 KKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI 534
K PGCS I++ F+ D + P K I LL++L +D +I
Sbjct: 627 TKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEI 677
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 149/279 (53%)
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+ +HA V K G + +N L+D Y KC L + +VF++M R+I WN++++G +L
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G + +A LF MP +W +M+SG+ EAL F M G +E S SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
AC+ L + G +H K+ L I +AL++MY KCG +N A ++FD+M +R+VV
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSM 376
SW+++I +G A +A+ +F M +V P+++T ++SACA G +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 377 KRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMK 415
++ + + I VD+ + R+ +A I + MP++
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 212/476 (44%), Gaps = 99/476 (20%)
Query: 17 FVPILQSC----ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV 72
F +L SC + I ++ +H ++K S F+ ++ID + G L +F ++
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQML-RDPRTGSLILP---------------- 115
+ N++ +N+++ T A +L++ M RD T + ++
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 116 ---------DKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
++++ V+ +C+GL + G Q+H+ + K S +AL+D+Y KC
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ +A +VF+EM DR++V+WN+LI+ + + G
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA--------------------------- 234
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
EALDVF+ M +EPDE+++ SV+ ACA L ++++G+ +H KN LR +I
Sbjct: 235 ----VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII 290
Query: 287 -CNALIEMYIKCGCINQASQLFD-------------------------------QMVERD 314
NA ++MY KC I +A +FD +M ER+
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERN 350
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA-----HTGFWNEG 369
VVSW+ +I G +G+ +A+ LF ++R V P +F +L ACA H G
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
+ K E I L+D+ + G +++ + +M M+ D W +++
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/530 (36%), Positives = 310/530 (58%), Gaps = 12/530 (2%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +L S E+++IH ++ + + LV + + L YA+ + + ++P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+F N+MIRA+ + + + + Y+++L +G+ + PD +T+ F++++C GL
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILS---SGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G Q+H + G + + L+ LY + L HKVF + D V +++ AR
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G + AR LF+ MP ++W AMISGY +G EAL+VF MQ+ G++ + ++++SV
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L AC QLG+L+ G W H Y ++N + + L+++Y KCG + +A ++F M E++V
Sbjct: 247 LSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
+WS+ + GLA +G K + LF M++ V PN +TF+ +L C+ GF +EG +FDS
Sbjct: 307 YTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDS 366
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M+ + IE ++EHYGCLVDL RAGRL+ A++II++MPMKP A +W SLL + R Y NLE
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLE 426
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+ V+A + +L LE + G YVLLSNIYA W++VS +R+ ++SK ++K PGCS++EVN
Sbjct: 427 LGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVN 486
Query: 496 NEVQEFVSGDDTKP-------FLKDIFWLLELLALHQDRAKDVIDIMYED 538
EV EF GD + P KDI L L D + DI E+
Sbjct: 487 GEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEE 536
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/511 (38%), Positives = 305/511 (59%), Gaps = 19/511 (3%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL--AYASLLFKQVKEPNVF 78
L C NL ++K+IH +L+ L QS +++TK+I G YA + + V+ N F
Sbjct: 56 LDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 79 LYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQ 138
L+ A+IR Y + AI +Y M ++ I P FT ++K+C + +LG+Q
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEE-----ITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 139 IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ 198
HA + N ++D+Y KC+ + A KVF+EM +RD+++W LI+ YAR+G
Sbjct: 171 FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 199 MKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPA 258
M+ A LF+ +P +V+WTAM++G+ EAL+ F +M+ GI DE+++ + A
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 290
Query: 259 CAQLGSLELGEWI------HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
CAQLG+ + + Y +H+ VI +ALI+MY KCG + +A +F M
Sbjct: 291 CAQLGASKYADRAVQIAQKSGYSPSDHV----VIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
++V ++S++I GLA HG+A +A+HLFH M + ++ PN +TF+G L AC+H+G ++G
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTY 431
FDSM + ++ +HY C+VDLLGR GRL +AL +I+ M ++P +WG+LL +CR +
Sbjct: 407 VFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
Query: 432 SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS- 490
+N EIA IA EHL LEP+ GNY+LLSN+YA G W V R+RKLI+ K +KKTP S
Sbjct: 467 NNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
+++ N ++ +F G+ P I LE L
Sbjct: 527 VVDKNGQMHKFFPGNLNHPMSNKIQDKLEEL 557
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 296/493 (60%), Gaps = 12/493 (2%)
Query: 30 LKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTN 89
+K++H L+ + ++ L+ +++ + N L YA LF + FLYN +I+AY
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLLIPN----LVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 90 NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLK 149
+H +I LY + D + P T F+ + A + +H+ + G +
Sbjct: 60 HHQPHESIVLYNLLSFDG-----LRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 150 SHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKM 209
S S L+ Y K L A +VF+EM+ RD+ WN +I+GY R G MK A LFD M
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 210 PYTTIVSWTAMISGYTHIGSYAEALDVFRQMQM-VGIEPDEISIVSVLPACAQLGSLELG 268
P + SWT +ISG++ G+Y+EAL +F M+ ++P+ I++VSVLPACA LG LE+G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLAN 327
+ Y +N +CNA IEMY KCG I+ A +LF+++ +R++ SW+++IG LA
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
HGK +A+ LF +M R P+ +TF+GLL AC H G +G F SM+ H I K+E
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVL 447
HYGC++DLLGR G+L +A ++I+ MPMKPDA +WG+LL +C + N+EIA IA E L L
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Query: 448 EPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS-LIEVNNEVQEFVSGDD 506
EP + GN V++SNIYA + +W+ V RMRKL++ ++M K G S +EV +V +F D
Sbjct: 415 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 474
Query: 507 TKPFLKDIFWLLE 519
+ P +I+ +LE
Sbjct: 475 SHPRSYEIYQVLE 487
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/525 (36%), Positives = 299/525 (56%), Gaps = 38/525 (7%)
Query: 18 VPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEP 75
+ +L SC+NL L +IH +KY + ++ K+I C + L YA L EP
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+ F++N ++R Y+ + ++ ++ +M+R + PD F+ FVIK+
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRK----GFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS---- 191
G Q+H K GL+SH L+ +YG C + A KVF+EM ++VAWN +I+
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 192 ---------------------------GYARLGQMKKARMLFDKMPYTTIVSWTAMISGY 224
GY + G+++ A+ +F +MP+ VSW+ MI G
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 225 THIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT 284
H GS+ E+ FR++Q G+ P+E+S+ VL AC+Q GS E G+ +H + +K
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 285 VICNALIEMYIKCGCINQASQLFDQMVE-RDVVSWSTVIGGLANHGKAHKAIHLFHEMQR 343
+ NALI+MY +CG + A +F+ M E R +VSW+++I GLA HG+ +A+ LF+EM
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
Query: 344 LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLD 403
V P+ I+FI LL AC+H G EG YF MKR +HIE +IEHYGC+VDL GR+G+L
Sbjct: 365 YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ 424
Query: 404 QALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYA 463
+A + I +MP+ P A +W +LL +C ++ N+E+A + L L+P ++G+ VLLSN YA
Sbjct: 425 KAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYA 484
Query: 464 KHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTK 508
G+W+DV+ +RK + + +KKT SL+EV + +F +G+ K
Sbjct: 485 TAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKK 529
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/513 (38%), Positives = 306/513 (59%), Gaps = 14/513 (2%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKY---LLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
++ ++ +++ E+ +IH IL++ L + L K+ S G + ++ LF Q
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+P++FL+ A I + N L A LY Q+L S I P++FT ++KSC+
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLL-----SSEINPNEFTFSSLLKSCS--- 141
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
GK IH HV KFGL L+D+Y K +++ A KVF+ M +R +V+ +I+
Sbjct: 142 -TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEI 250
YA+ G ++ AR LFD M IVSW MI GY G +AL +F+++ G +PDEI
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
++V+ L AC+Q+G+LE G WIH++ + + +C LI+MY KCG + +A +F+
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEG 369
+D+V+W+ +I G A HG + A+ LF+EMQ + + P DITFIG L ACAH G NEG
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
+ F+SM +++ I+ KIEHYGCLV LLGRAG+L +A I+ M M D+ +W S+L SC+
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+ + + E+L+ L +++G YVLLSNIYA G +E V+++R L++ K + K PG
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
S IE+ N+V EF +GD K+I+ +L ++
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKIS 533
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 363 bits (933), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 305/570 (53%), Gaps = 78/570 (13%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+ ++ S + +LK+IH ++L L S FL+TK+I +S GD+ +A +F + P
Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
+F +NA+IR Y+ N+ + A+ +Y M + + PD FT P ++K+C+GL +G
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNM-----QLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDEL---------------------------- 168
+ +HA V + G + +N L+ LY KC L
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 169 -----IEAHKVFEEMTDRDIVA-WNNLIS------------------------------- 191
+EA ++F +M D+ W L+S
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 192 -------GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG 244
YA+ GQ+ A++LFDKM ++ W AMISGY G EA+D+F +M
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 245 IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQAS 304
+ PD ISI S + ACAQ+GSLE ++ Y ++ I +ALI+M+ KCG + A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 305 QLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG 364
+FD+ ++RDVV WS +I G HG+A +AI L+ M+R V PND+TF+GLL AC H+G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 365 FWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
EG +F+ M DH I + +HY C++DLLGRAG LDQA +I+ MP++P +WG+L
Sbjct: 439 MVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 425 LSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
LS+C+ + ++E+ A + L ++P +TG+YV LSN+YA W+ V+ +R ++ K +
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 485 KTPGCSLIEVNNEVQEFVSGDDTKPFLKDI 514
K GCS +EV ++ F GD + P ++I
Sbjct: 558 KDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 362 bits (930), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/486 (37%), Positives = 294/486 (60%), Gaps = 6/486 (1%)
Query: 31 KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNN 90
+ +H +K + F+ +I S GDL A +F +KE +V +N+MI +
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 91 HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
A+ L+K+M + S + T+ V+ +CA + G+Q+ +++ + +
Sbjct: 211 GSPDKALELFKKMESEDVKASHV-----TMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMP 210
+ NA+LD+Y KC + +A ++F+ M ++D V W ++ GYA + AR + + MP
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 211 YTTIVSWTAMISGYTHIGSYAEALDVFRQMQMV-GIEPDEISIVSVLPACAQLGSLELGE 269
IV+W A+IS Y G EAL VF ++Q+ ++ ++I++VS L ACAQ+G+LELG
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 270 WIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHG 329
WIH Y K+ + + +ALI MY KCG + ++ ++F+ + +RDV WS +IGGLA HG
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 330 KAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHY 389
++A+ +F++MQ V PN +TF + AC+HTG +E F M+ ++ I + +HY
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505
Query: 390 GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEP 449
C+VD+LGR+G L++A+ IE MP+ P +WG+LL +C+ ++NL +A +A LL LEP
Sbjct: 506 ACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEP 565
Query: 450 EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
+ G +VLLSNIYAK G+WE+VS +RK +R +KK PGCS IE++ + EF+SGD+ P
Sbjct: 566 RNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 625
Query: 510 FLKDIF 515
+ ++
Sbjct: 626 MSEKVY 631
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 213/445 (47%), Gaps = 71/445 (15%)
Query: 15 DRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQV 72
R + +++ C +L +LK+ H +++ + +K+ + +S L YA +F ++
Sbjct: 31 SRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 73 KEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+PN F +N +IRAY + L+I + M+ + S P+K+T PF+IK+ A +
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE----SQCYPNKYTFPFLIKAAAEVSS 146
Query: 133 PSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISG 192
SLG+ +H K + S N+L+ Y C +L A KVF + ++D+V+WN++I+G
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
+ + G K AL++F++M+ ++ +++
Sbjct: 207 FVQKGSPDK-------------------------------ALELFKKMESEDVKASHVTM 235
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V VL ACA++ +LE G + Y ++N + + NA+++MY KCG I A +LFD M E
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 313 RDVVSWSTVIGGLA-------------------------------NHGKAHKAIHLFHEM 341
+D V+W+T++ G A +GK ++A+ +FHE+
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 342 QRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAG 400
Q K + N IT + LSACA G G + S + H I L+ + + G
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCG 414
Query: 401 RLDQALNIIEEMPMKPDAKIWGSLL 425
L+++ + + K D +W +++
Sbjct: 415 DLEKSREVFNSVE-KRDVFVWSAMI 438
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 137/285 (48%), Gaps = 18/285 (6%)
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH----IGSYAEALDVFRQMQMVGI 245
++ + ++ AR +FD++P +W +I Y + S LD+ + Q
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCY-- 128
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQ 305
P++ + ++ A A++ SL LG+ +H K+ + + N+LI Y CG ++ A +
Sbjct: 129 -PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACK 187
Query: 306 LFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACA---H 362
+F + E+DVVSW+++I G G KA+ LF +M+ V + +T +G+LSACA +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
F + Y + ++ + + ++D+ + G ++ A + + M K D W
Sbjct: 248 LEFGRQVCSYIE----ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK-DNVTWT 302
Query: 423 SLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
++L Y+ E A E L + +D + L + Y ++G+
Sbjct: 303 TMLDG---YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 315/521 (60%), Gaps = 15/521 (2%)
Query: 11 KELEDRFV-PILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCN-SGGDLAYASLL 68
++L ++F+ ++ +L LK++ + ++ LS S+FL K++ C +L+YA +
Sbjct: 20 EQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFI 79
Query: 69 FKQVKEPNVFLYNAMIRAYTNN---HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIK 125
F + PN LY A++ AY+++ H A + ++ M+ S+ P+ F P V+K
Sbjct: 80 FDRFSFPNTHLYAAVLTAYSSSLPLHASS-AFSFFRLMVNR----SVPRPNHFIYPLVLK 134
Query: 126 SCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC-DELIEAHKVFEEMTDRDIV 184
S L +H H+ K G + + + ALL Y + A ++F+EM++R++V
Sbjct: 135 STPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVV 194
Query: 185 AWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMV 243
+W ++SGYAR G + A LF+ MP + SW A+++ T G + EA+ +FR+M
Sbjct: 195 SWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEP 254
Query: 244 GIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQA 303
I P+E+++V VL ACAQ G+L+L + IH + + L + N+L+++Y KCG + +A
Sbjct: 255 SIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEA 314
Query: 304 SQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV---PPNDITFIGLLSAC 360
S +F ++ + +W+++I A HG++ +AI +F EM +L + P+ ITFIGLL+AC
Sbjct: 315 SSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
H G ++G YFD M IE +IEHYGCL+DLLGRAGR D+AL ++ M MK D I
Sbjct: 375 THGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAI 434
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
WGSLL++C+ + +L++A +A+++L+ L P + G +++N+Y + G WE+ R RK+I+
Sbjct: 435 WGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKH 494
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELL 521
++ K PG S IE++NEV +F S D + P ++I+ +L+ L
Sbjct: 495 QNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 356 bits (913), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 308/564 (54%), Gaps = 71/564 (12%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLY 80
L C NL ++K++H QI++ L + + K+I + A +F QV+EPNV L
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 81 NAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIH 140
N++IRA+ N A ++ +M R + D FT PF++K+C+G + K +H
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFG-----LFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 141 AHVCKFGLKSHSITENALLDLYGKCD---------------------------------E 167
H+ K GL S NAL+D Y +C E
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 168 LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHI 227
L +A ++F+EM RD+++WN ++ GYAR +M KA LF+KMP VSW+ M+ GY+
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 228 GSYAEALDVFRQM-------------------------------QMV--GIEPDEISIVS 254
G A +F +M QMV G++ D +++S
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 255 VLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERD 314
+L AC + G L LG IH +++L + NAL++MY KCG + +A +F+ + ++D
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
+VSW+T++ GL HG +AI LF M+R + P+ +TFI +L +C H G +EG+ YF
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
SM++ + + ++EHYGCLVDLLGR GRL +A+ +++ MPM+P+ IWG+LL +CR ++ +
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
+IA +++L+ L+P D GNY LLSNIYA WE V+ +R ++S ++K G S +E+
Sbjct: 501 DIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLL 518
+ + EF D + P I+ +L
Sbjct: 561 EDGIHEFTVFDKSHPKSDQIYQML 584
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 351 bits (900), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 187/502 (37%), Positives = 290/502 (57%), Gaps = 5/502 (0%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
+LK L + + I + S GD+ A +F + ++ +N +I Y
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
AI +YK M + + PD T+ ++ SC+ L + GK+ + +V + GL+
Sbjct: 241 AIYVYKLMESEG-----VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIV 215
NAL+D++ KC ++ EA ++F+ + R IV+W +ISGYAR G + +R LFD M +V
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 216 SWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYC 275
W AMI G +AL +F++MQ +PDEI+++ L AC+QLG+L++G WIH Y
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 276 DKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAI 335
+K L + +L++MY KCG I++A +F + R+ ++++ +IGGLA HG A AI
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 475
Query: 336 HLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDL 395
F+EM + P++ITFIGLLSAC H G G YF MK ++ +++HY +VDL
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 535
Query: 396 LGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNY 455
LGRAG L++A ++E MPM+ DA +WG+LL CR + N+E+ A + LL L+P D+G Y
Sbjct: 536 LGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIY 595
Query: 456 VLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIF 515
VLL +Y + WED R R+++ + ++K PGCS IEVN V EF+ D ++P + I+
Sbjct: 596 VLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIY 655
Query: 516 WLLELLALHQDRAKDVIDIMYE 537
L L H + V+ YE
Sbjct: 656 DRLHCLGRHMRSSLSVLFSEYE 677
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 210/430 (48%), Gaps = 67/430 (15%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFK 70
L + + +L+ C+ L+ LK+I Q++ L F +++I C + L Y+ + K
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 71 QVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGL 130
++ PN+F +N IR ++ + + LYKQMLR S PD FT P + K CA L
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESR--PDHFTYPVLFKVCADL 169
Query: 131 LCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
SLG I HV K L+ S NA + ++ C ++ A KVF+E RD+V+WN LI
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEI 250
+GY ++G+ +K A+ V++ M+ G++PD++
Sbjct: 230 NGYKKIGEAEK-------------------------------AIYVYKLMESEGVKPDDV 258
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+++ ++ +C+ LG L G+ + Y +N L + NAL++M+ KCG I++A ++FD +
Sbjct: 259 TMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL 318
Query: 311 VERDVVSWSTVIGGLANHG-------------------------------KAHKAIHLFH 339
+R +VSW+T+I G A G + A+ LF
Sbjct: 319 EKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
EMQ P++IT I LSAC+ G + G+ +++ + + + LVD+ +
Sbjct: 379 EMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSLVDMYAKC 437
Query: 400 GRLDQALNII 409
G + +AL++
Sbjct: 438 GNISEALSVF 447
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 12/287 (4%)
Query: 150 SHS-ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARML--- 205
+HS + N LL L KC L+ ++ +M ++ S + ++R L
Sbjct: 47 THSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYS 106
Query: 206 ---FDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI---EPDEISIVSVLPAC 259
+ I SW I G++ + E+ +++QM G PD + + C
Sbjct: 107 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 166
Query: 260 AQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
A L LG I + K L + + NA I M+ CG + A ++FD+ RD+VSW+
Sbjct: 167 ADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN 226
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRD 379
+I G G+A KAI+++ M+ V P+D+T IGL+S+C+ G N G +++ +K +
Sbjct: 227 CLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK-E 285
Query: 380 HHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + I L+D+ + G + +A I + + + W +++S
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVS-WTTMIS 331
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 20/236 (8%)
Query: 33 IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHL 92
IH I KY LS + L T ++D+ G+++ A +F ++ N Y A+I +
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 470
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHV-CKFGLKSH 151
AI+ + +M+ + I PD+ T ++ +C G+ + + +F L
Sbjct: 471 ASTAISYFNEMI-----DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQ 525
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLISGYARLGQM----KKARMLF 206
+ ++DL G+ L EA ++ E M + D W L+ G G + K A+ L
Sbjct: 526 LKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLL 585
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
+ P + + + + Y + +A R M G+E +P C+ +
Sbjct: 586 ELDPSDSGI-YVLLDGMYGEANMWEDAKRARRMMNERGVEK--------IPGCSSI 632
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/520 (36%), Positives = 307/520 (59%), Gaps = 44/520 (8%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG--GDLAYASLLFKQVK 73
R + Q+C+N+ LK+IH ++ L + +V ++I + G L YA LF ++
Sbjct: 14 RRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIP 73
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+P+V + N ++R + ++LY +M + + PD++T FV+K+C+ L
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRG-----VSPDRYTFTFVLKACSKLEWR 128
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKC----------DELIEAHKV--------- 174
S G H V + G + +NAL+ + C D+ +AHKV
Sbjct: 129 SNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGY 188
Query: 175 ------------FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
F+EM +D VAWN +I+G + +M AR LFD+ +V+W AMIS
Sbjct: 189 AKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMIS 248
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
GY + G EAL +F++M+ G PD ++I+S+L ACA LG LE G+ +H+Y + +
Sbjct: 249 GYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVS 308
Query: 283 RTV-----ICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHL 337
++ I NALI+MY KCG I++A ++F + +RD+ +W+T+I GLA H A +I +
Sbjct: 309 SSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEM 367
Query: 338 FHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLG 397
F EMQRLKV PN++TFIG++ AC+H+G +EG YF M+ ++IE I+HYGC+VD+LG
Sbjct: 368 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 427
Query: 398 RAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVL 457
RAG+L++A +E M ++P+A +W +LL +C+ Y N+E+ A E LL + +++G+YVL
Sbjct: 428 RAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVL 487
Query: 458 LSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNE 497
LSNIYA G+W+ V ++RK+ +KK G SLIE +++
Sbjct: 488 LSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDD 527
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 349 bits (895), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/484 (38%), Positives = 291/484 (60%), Gaps = 18/484 (3%)
Query: 62 LAYASLLF--KQVKEPNVFLYNAMIRAYTNN---HLYGLAINLYKQMLRDPRTGSLILPD 116
+AYA+ +F + +K + FL+N +IRA +N I++Y +M R+ R + PD
Sbjct: 8 IAYANPIFHIRHLKLES-FLWNIIIRAIVHNVSSPQRHSPISVYLRM-RNHR----VSPD 61
Query: 117 KFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFE 176
T PF++ S L LG++ HA + FGL +LL++Y C +L A +VF+
Sbjct: 62 FHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFD 121
Query: 177 EMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDV 236
+ +D+ AWN++++ YA+ G + AR LFD+MP ++SW+ +I+GY G Y EALD+
Sbjct: 122 DSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDL 181
Query: 237 FRQMQM-----VGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
FR+MQ+ + P+E ++ +VL AC +LG+LE G+W+H Y DK H+ V+ ALI
Sbjct: 182 FREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALI 241
Query: 292 EMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRL-KVPPN 349
+MY KCG + +A ++F+ + ++DV ++S +I LA +G + LF EM + PN
Sbjct: 242 DMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPN 301
Query: 350 DITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNII 409
+TF+G+L AC H G NEG YF M + I I+HYGC+VDL GR+G + +A + I
Sbjct: 302 SVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 361
Query: 410 EEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWE 469
MPM+PD IWGSLLS R +++ A++ L+ L+P ++G YVLLSN+YAK GRW
Sbjct: 362 ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWM 421
Query: 470 DVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAK 529
+V +R + K + K PGCS +EV V EFV GD+++ + I+ +L+ + A
Sbjct: 422 EVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAG 481
Query: 530 DVID 533
V D
Sbjct: 482 YVTD 485
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 162/389 (41%), Gaps = 68/389 (17%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDL----------- 62
F +L S N + L ++ H QIL + L + F+ T ++++ +S GDL
Sbjct: 65 FPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSG 124
Query: 63 ------------AYASL--------LFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQ 102
AYA LF ++ E NV ++ +I Y Y A++L+++
Sbjct: 125 SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M + + P++FT+ V+ +C L GK +HA++ K+ ++ + AL+D+Y
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
Query: 163 GKCDELIEAHKVFEEM-TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMI 221
KC L A +VF + + +D+ A++ +I A G + LF +M +
Sbjct: 245 AKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD-------- 296
Query: 222 SGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGE-WIHMYCDKNHL 280
I P+ ++ V +L AC G + G+ + M ++ +
Sbjct: 297 ----------------------NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGI 334
Query: 281 LRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFH 339
++++Y + G I +A M +E DV+ W +++ G G
Sbjct: 335 TPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALK 394
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+ L P N ++ L + A TG W E
Sbjct: 395 RLIELD-PMNSGAYVLLSNVYAKTGRWME 422
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 15/236 (6%)
Query: 20 ILQSCENLIELKK---IHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQV-KEP 75
+L +C L L++ +H I KY + L T +ID+ G L A +F + +
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+V Y+AMI +YGL + Q+ + T I P+ T ++ +C +
Sbjct: 265 DVKAYSAMICCLA---MYGLTDECF-QLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 136 GKQ-IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLISGY 193
GK + +FG+ ++DLYG+ + EA M + D++ W +L+SG
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 194 ARLGQMKKA----RMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
LG +K + L + P + ++ + + Y G + E + +M++ GI
Sbjct: 381 RMLGDIKTCEGALKRLIELDPMNS-GAYVLLSNVYAKTGRWMEVKCIRHEMEVKGI 435
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 296/534 (55%), Gaps = 58/534 (10%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSN---FLVTKMIDVCNSGGDLAYASLLFKQV 72
R + ++C ++ +LK++H L+ + FL K++ + +S D+ YA +F +
Sbjct: 50 RIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 109
Query: 73 KEPNVFLYNAMIRAYTNN-HLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ + F++N +IRA ++ A LY++ML + PDK T PFV+K+CA +
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS----PDKHTFPFVLKACAYIF 165
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
S GKQ+H + K G N L+ LYG C
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC-------------------------- 199
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G + AR +FD+MP ++VSW +MI G Y AL +FR+MQ EPD +
Sbjct: 200 -----GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYT 253
Query: 252 IVSVLPACAQLGSLELGEWIHMY----CDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+ SVL ACA LGSL LG W H + CD + + ++ N+LIEMY KCG + A Q+F
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVD-VAMDVLVKNSLIEMYCKCGSLRMAEQVF 312
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM--QRLKVPPNDITFIGLLSACAHTGF 365
M +RD+ SW+ +I G A HG+A +A++ F M +R V PN +TF+GLL AC H GF
Sbjct: 313 QGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGF 372
Query: 366 WNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425
N+G YFD M RD+ IE +EHYGC+VDL+ RAG + +A++++ MPMKPDA IW SLL
Sbjct: 373 VNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Query: 426 SS-CRTYSNLEIAVIAMEHLLVLEPED-------TGNYVLLSNIYAKHGRWEDVSRMRKL 477
+ C+ +++E++ +++ + ++ +G YVLLS +YA RW DV +RKL
Sbjct: 433 DACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKL 492
Query: 478 IRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDV 531
+ ++K PGCS IE+N EF +GD + P K I+ L+++ DR + +
Sbjct: 493 MSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVI---DDRLRSI 543
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 345 bits (886), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/412 (41%), Positives = 254/412 (61%), Gaps = 4/412 (0%)
Query: 115 PDKFTLPFVIKSCAGLLCPS--LGKQIHAHVCKFGL-KSHSITENALLDLYGKCDELIEA 171
P+ T ++ C S LG +H + CK GL ++H + A++ +Y K +A
Sbjct: 69 PNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKA 128
Query: 172 HKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYA 231
VF+ M D++ V WN +I GY R GQ+ A +FDKMP ++SWTAMI+G+ G
Sbjct: 129 RLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQE 188
Query: 232 EALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALI 291
EAL FR+MQ+ G++PD ++I++ L AC LG+L G W+H Y + N+LI
Sbjct: 189 EALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLI 248
Query: 292 EMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI 351
++Y +CGC+ A Q+F M +R VVSW++VI G A +G AH+++ F +MQ P+ +
Sbjct: 249 DLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAV 308
Query: 352 TFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEE 411
TF G L+AC+H G EGL YF MK D+ I +IEHYGCLVDL RAGRL+ AL +++
Sbjct: 309 TFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQS 368
Query: 412 MPMKPDAKIWGSLLSSCRTY-SNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWED 470
MPMKP+ + GSLL++C + +N+ +A M+HL L + NYV+LSN+YA G+WE
Sbjct: 369 MPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEG 428
Query: 471 VSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLA 522
S+MR+ ++ +KK PG S IE+++ + F++GD+ I +LEL++
Sbjct: 429 ASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELIS 480
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 151/345 (43%), Gaps = 80/345 (23%)
Query: 213 TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL--GSLELGEW 270
T VSWT+ I+ T G AEA F M + G+EP+ I+ +++L C GS LG+
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 271 IHMYC-----DKNHLL---------------------------RRTVICNALIEMYIKCG 298
+H Y D+NH++ + +V N +I+ Y++ G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 299 CINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLS 358
++ A+++FD+M ERD++SW+ +I G G +A+ F EMQ V P+ + I L+
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 359 ACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI---------- 408
AC + G + GL + ++ + L+DL R G ++ A +
Sbjct: 215 ACTNLGALSFGL-WVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 409 ------------------------IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHL 444
++E KPDA + L++C S++ + + +
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC---SHVGLVEEGLRYF 330
Query: 445 LVLEPE-----DTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMK 484
+++ + +Y L ++Y++ GR ED KL++S MK
Sbjct: 331 QIMKCDYRISPRIEHYGCLVDLYSRAGRLEDA---LKLVQSMPMK 372
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 40/296 (13%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLA 96
+ Y+ +++ MID G + A+ +F ++ E ++ + AMI + A
Sbjct: 131 VFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEA 190
Query: 97 INLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITEN 156
+ +++M S + PD + + +C L S G +H +V K++ N
Sbjct: 191 LLWFREM-----QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN 245
Query: 157 ALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVS 216
+L+DLY +C + A +VF M R +V+WN++I G+A G ++ + F KM
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM------- 298
Query: 217 WTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG--EWIHMY 274
Q G +PD ++ L AC+ +G +E G + M
Sbjct: 299 ------------------------QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHG 329
CD + R L+++Y + G + A +L M ++ + V +++ +NHG
Sbjct: 335 CDY-RISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 44/165 (26%)
Query: 301 NQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSAC 360
N Q +Q VSW++ I L +G+ +A F +M V PN ITFI LLS C
Sbjct: 22 NPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC 81
Query: 361 --------------------------------------AHTGFWNEGLMYFDSMKRDHHI 382
+ G + + + FD M+ + +
Sbjct: 82 GDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV 141
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+ ++D R+G++D A + ++MP + D W ++++
Sbjct: 142 T-----WNTMIDGYMRSGQVDNAAKMFDKMPER-DLISWTAMING 180
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 345 bits (885), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 286/507 (56%), Gaps = 43/507 (8%)
Query: 18 VPILQSCE---NLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGD---LAYASLLFKQ 71
VPIL E +L E+++ H +LK L F +K++ + + ++YA + +
Sbjct: 40 VPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNR 99
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ PN F +N++IRAY N+ +A+ ++++ML P + PDK++ FV+K+CA
Sbjct: 100 IGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP-----VFPDKYSFTFVLKACAAFC 154
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKC---------------------DELI- 169
G+QIH K GL + EN L+++YG+ + L+
Sbjct: 155 GFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLS 214
Query: 170 ---------EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAM 220
EA +F+EM +R++ +WN +ISGYA G +K+A+ +FD MP +VSW AM
Sbjct: 215 AYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAM 274
Query: 221 ISGYTHIGSYAEALDVFRQMQMVGIE-PDEISIVSVLPACAQLGSLELGEWIHMYCDKNH 279
++ Y H+G Y E L+VF +M E PD ++VSVL ACA LGSL GEW+H+Y DK+
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG 334
Query: 280 LLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFH 339
+ + AL++MY KCG I++A ++F +RDV +W+++I L+ HG A+ +F
Sbjct: 335 IEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFS 394
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
EM PN ITFIG+LSAC H G ++ F+ M + +E IEHYGC+VDLLGR
Sbjct: 395 EMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRM 454
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLS 459
G++++A ++ E+P + + SLL +C+ + LE A LL L D+ Y +S
Sbjct: 455 GKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMS 514
Query: 460 NIYAKHGRWEDVSRMRKLIRSKSMKKT 486
N+YA GRWE V R+ +R++ + ++
Sbjct: 515 NLYASDGRWEKVIDGRRNMRAERVNRS 541
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 343 bits (881), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 296/558 (53%), Gaps = 71/558 (12%)
Query: 37 ILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ-VKEPNVFLYNAMIRAYTNNHLYGL 95
+L++ + + + TK + + S + YA LF Q + + FL N+MI+AY Y
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 96 AINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITE 155
+ LY RD R + PD FT + KSC+ +C G Q+H+ + +FG +
Sbjct: 61 SFALY----RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVS 116
Query: 156 NALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQ----------------- 198
++D+Y K ++ A F+EM R V+W LISGY R G+
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV 176
Query: 199 ---------------MKKARMLFDKMPYTTIVSWTAMISGY------------------- 224
M AR LFD+M + T+++WT MI GY
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPER 236
Query: 225 ------THIGSYA------EALDVFRQMQ-MVGIEPDEISIVSVLPACAQLGSLELGEWI 271
T IG Y E + +F++MQ ++PD+++I+SVLPA + G+L LGEW
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 272 HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKA 331
H + + L ++ +C A+++MY KCG I +A ++FD+M E+ V SW+ +I G A +G A
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 332 HKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGC 391
A+ LF M ++ P++IT + +++AC H G EG +F M R+ + KIEHYGC
Sbjct: 357 RAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGC 414
Query: 392 LVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+VDLLGRAG L +A ++I MP +P+ I S LS+C Y ++E A ++ + LEP++
Sbjct: 415 MVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQN 474
Query: 452 TGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFL 511
GNYVLL N+YA RW+D ++ ++R KK GCSLIE+N V EF+SGD T P
Sbjct: 475 DGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHR 534
Query: 512 KDIFWLLELLALHQDRAK 529
+ I +L L +H + K
Sbjct: 535 RSIHLVLGDLLMHMNEEK 552
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 288/486 (59%), Gaps = 38/486 (7%)
Query: 50 TKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRT 109
T +I S G + A LF ++ +V +NAMI Y Y A+ L+K M++
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK---- 259
Query: 110 GSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELI 169
+ + PD+ T+ V+ +CA LG+Q+H + G S+ NAL+DLY KC
Sbjct: 260 -TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC---- 314
Query: 170 EAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGS 229
G+++ A LF+++PY ++SW +I GYTH+
Sbjct: 315 ---------------------------GELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 230 YAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDK--NHLLRRTVIC 287
Y EAL +F++M G P++++++S+LPACA LG++++G WIH+Y DK + + +
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 288 NALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVP 347
+LI+MY KCG I A Q+F+ ++ + + SW+ +I G A HG+A + LF M+++ +
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 348 PNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALN 407
P+DITF+GLLSAC+H+G + G F +M +D+ + K+EHYGC++DLLG +G +A
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 408 IIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGR 467
+I M M+PD IW SLL +C+ + N+E+ E+L+ +EPE+ G+YVLLSNIYA GR
Sbjct: 528 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 587
Query: 468 WEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDR 527
W +V++ R L+ K MKK PGCS IE+++ V EF+ GD P ++I+ +LE + + ++
Sbjct: 588 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Query: 528 AKDVID 533
A V D
Sbjct: 648 AGFVPD 653
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 231/400 (57%), Gaps = 15/400 (3%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC---NSGGDLAYASLLFKQVKEPN 76
+L +C+ L L+ IH Q++K L +N+ ++K+I+ C L YA +FK ++EPN
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSL-ILPDKFTLPFVIKSCAGLLCPSL 135
+ ++N M R + + A+ LY M+ SL +LP+ +T PFV+KSCA
Sbjct: 99 LLIWNTMFRGHALSSDPVSALKLYVCMI------SLGLLPNSYTFPFVLKSCAKSKAFKE 152
Query: 136 GKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYAR 195
G+QIH HV K G +L+ +Y + L +AHKVF++ RD+V++ LI GYA
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 196 LGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSV 255
G ++ A+ LFD++P +VSW AMISGY G+Y EAL++F+ M + PDE ++V+V
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
+ ACAQ GS+ELG +H++ D + I NALI++Y KCG + A LF+++ +DV
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL---MY 372
+SW+T+IGG + +A+ LF EM R PND+T + +L ACAH G + G +Y
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEM 412
D KR + + L+D+ + G ++ A + +
Sbjct: 393 ID--KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 342 bits (876), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 289/532 (54%), Gaps = 39/532 (7%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFL 79
I++ C L+ ++K L+Q L+ + I C S L A Q++EPNVF+
Sbjct: 34 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFV 93
Query: 80 YNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQI 139
YNA+ + + ++ LY +MLRD + P +T ++K A G+ +
Sbjct: 94 YNALFKGFVTCSHPIRSLELYVRMLRDS-----VSPSSYTYSSLVK--ASSFASRFGESL 146
Query: 140 HAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW------------- 186
AH+ KFG H + L+D Y + EA KVF+EM +RD +AW
Sbjct: 147 QAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDM 206
Query: 187 ------------------NNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIG 228
N LI+GY LG +++A LF++MP I+SWT MI GY+
Sbjct: 207 DSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNK 266
Query: 229 SYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICN 288
Y EA+ VF +M GI PDE+++ +V+ ACA LG LE+G+ +HMY +N + I +
Sbjct: 267 RYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGS 326
Query: 289 ALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPP 348
AL++MY KCG + +A +F + ++++ W+++I GLA HG A +A+ +F +M+ V P
Sbjct: 327 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 386
Query: 349 NDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNI 408
N +TF+ + +AC H G +EG + SM D+ I +EHYG +V L +AG + +AL +
Sbjct: 387 NAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALEL 446
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRW 468
I M +P+A IWG+LL CR + NL IA IA L+VLEP ++G Y LL ++YA+ RW
Sbjct: 447 IGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW 506
Query: 469 EDVSRMRKLIRSKSMKKT-PGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
DV+ +R +R ++K PG S I ++ F + D + ++ LL+
Sbjct: 507 RDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLD 558
>sp|O80488|PPR23_ARATH Pentatricopeptide repeat-containing protein At1g09190
OS=Arabidopsis thaliana GN=PCMP-E70 PE=2 SV=1
Length = 484
Score = 342 bits (876), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 287/483 (59%), Gaps = 7/483 (1%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
E+E + + +L L +IH +L++ L SN L+ I +C S + YA+ +F
Sbjct: 2 EIERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSH 61
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ PNV ++NAMI+ Y+ +++ + M I D++T ++KSC+ L
Sbjct: 62 IQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM-----KSRGIWADEYTYAPLLKSCSSLS 116
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
GK +H + + G +++LY + +A KVF+EM++R++V WN +I
Sbjct: 117 DLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIR 176
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
G+ G +++ LF +M +IVSW +MIS + G EAL++F +M G +PDE +
Sbjct: 177 GFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEAT 236
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQM 310
+V+VLP A LG L+ G+WIH + + L + + + NAL++ Y K G + A+ +F +M
Sbjct: 237 VVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM 296
Query: 311 VERDVVSWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEG 369
R+VVSW+T+I G A +GK I LF M + KV PN+ TF+G+L+ C++TG G
Sbjct: 297 QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERG 356
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
F M +E + EHYG +VDL+ R+GR+ +A ++ MP+ +A +WGSLLS+CR
Sbjct: 357 EELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACR 416
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
++ ++++A +A L+ +EP ++GNYVLLSN+YA+ GRW+DV ++R L++ ++K+ G
Sbjct: 417 SHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQ 476
Query: 490 SLI 492
S I
Sbjct: 477 STI 479
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 341 bits (875), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 300/521 (57%), Gaps = 9/521 (1%)
Query: 18 VPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V ++ +C L +L+ K++ I + ++ +V+ ++D+ + A LF +
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA 299
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
N+ L NAM Y L A+ ++ M+ S + PD+ ++ I SC+ L
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMM-----DSGVRPDRISMLSAISSCSQLRNIL 354
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK H +V + G +S NAL+D+Y KC A ++F+ M+++ +V WN++++GY
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ-MVGIEPDEISIV 253
G++ A F+ MP IVSW +ISG + EA++VF MQ G+ D ++++
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
S+ AC LG+L+L +WI+ Y +KN + + L++M+ +CG A +F+ + R
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
DV +W+ IG +A G A +AI LF +M + P+ + F+G L+AC+H G +G F
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM + H + + HYGC+VDLLGRAG L++A+ +IE+MPM+P+ IW SLL++CR N
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+E+A A E + VL PE TG+YVLLSN+YA GRW D++++R ++ K ++K PG S I+
Sbjct: 655 VEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDI 534
+ + EF SGD++ P + +I +L+ ++ V D+
Sbjct: 715 IRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 755
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 197/416 (47%), Gaps = 53/416 (12%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQSNFLVTKMI-DVCNSGG--DLAYASLLFKQVKE-PN 76
L++C+ + ELK H + K L +TK++ C G L++A +F+ +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
F+YN++IR Y ++ L AI L+ +M+ S I PDK+T PF + +CA G
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMN-----SGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
QIH + K G +N+L+ Y +C EL A KVF+EM++R++V+W ++I GYAR
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
K A LF FR ++ + P+ +++V V+
Sbjct: 214 DFAKDAVDLF------------------------------FRMVRDEEVTPNSVTMVCVI 243
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA+L LE GE ++ + + + ++ +AL++MY+KC I+ A +LFD+ ++
Sbjct: 244 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTG--FWNEGLMYFD 374
+ + G +A+ +F+ M V P+ I+ + +S+C+ W +
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC---- 359
Query: 375 SMKRDHHIEHKIEHY----GCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ + + E + L+D+ + R D A I + M K W S+++
Sbjct: 360 ---HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVA 411
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 300/497 (60%), Gaps = 10/497 (2%)
Query: 27 LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRA 86
+IE +K+H +K L +++ ++ + S G + +F ++ + +V +N +I +
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISS 121
Query: 87 YTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKF 146
Y N + AI ++K+M ++ S + D+ T+ + +C+ L +G++I+ V
Sbjct: 122 YVGNGRFEDAIGVFKRMSQE----SNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE 177
Query: 147 GLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLF 206
S I NAL+D++ KC L +A VF+ M D+++ W +++ GY G++ +AR+LF
Sbjct: 178 FEMSVRIG-NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLF 236
Query: 207 DKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLE 266
++ P +V WTAM++GY + EAL++FR MQ GI PD +VS+L CAQ G+LE
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 267 LGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLA 326
G+WIH Y ++N + V+ AL++MY KCGCI A ++F ++ ERD SW+++I GLA
Sbjct: 297 QGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLA 356
Query: 327 NHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKI 386
+G + +A+ L++EM+ + V + ITF+ +L+AC H GF EG F SM H+++ K
Sbjct: 357 MNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKS 416
Query: 387 EHYGCLVDLLGRAGRLDQALNIIEEMPMKPD---AKIWGSLLSSCRTYSNLEIAVIAMEH 443
EH CL+DLL RAG LD+A +I++M + D ++ SLLS+ R Y N++IA E
Sbjct: 417 EHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEK 476
Query: 444 LLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVS 503
L +E D+ + LL+++YA RWEDV+ +R+ ++ ++K PGCS IE++ EF+
Sbjct: 477 LEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIV 536
Query: 504 GDD--TKPFLKDIFWLL 518
GDD + P + +I +L
Sbjct: 537 GDDLLSHPKMDEINSML 553
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 71/386 (18%)
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
++ P++ +YN M+++ + + + L+ ++ G + PD FTLP V+KS L
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGEL-----RGQGLYPDNFTLPVVLKSIGRLR 60
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
G+++H + K GL+ S N+L+ +Y ++ HKVF+EM RD+V+WN LIS
Sbjct: 61 KVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLIS 120
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEI 250
Y G+ + +A+ VF++M Q ++ DE
Sbjct: 121 SYVGNGR-------------------------------FEDAIGVFKRMSQESNLKFDEG 149
Query: 251 SIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQM 310
+IVS L AC+ L +LE+GE I+ + I NAL++M+ KCGC+++A +FD M
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 311 VE-------------------------------RDVVSWSTVIGGLANHGKAHKAIHLFH 339
+ +DVV W+ ++ G + +A+ LF
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 340 EMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
MQ + P++ + LL+ CA TG +G + + K+ LVD+ +
Sbjct: 269 CMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA-LVDMYAKC 327
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLL 425
G ++ AL + E+ + D W SL+
Sbjct: 328 GCIETALEVFYEIKER-DTASWTSLI 352
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 338 bits (866), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 183/520 (35%), Positives = 305/520 (58%), Gaps = 16/520 (3%)
Query: 24 CENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNVFLYN 81
C+++ EL KIHT ++ LS+ V++ + +S GD+ YA ++ +P + +N
Sbjct: 18 CKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWN 77
Query: 82 AMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHA 141
+IR ++N+ +I++Y QMLR +LPD T PF++KS + L LG +H
Sbjct: 78 FVIRGFSNSRNPEKSISVYIQMLRFG-----LLPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 142 HVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKK 201
V K GL+ N L+ +YG + A K+F+EM +++V WN+++ YA+ G +
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 202 ARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVG-IEPDEISIVSVLPACA 260
AR++FD+M +V+W++MI GY G Y +AL++F QM +G + +E+++VSV+ ACA
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 252
Query: 261 QLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF--DQMVERDVVSW 318
LG+L G+ +H Y HL ++ +LI+MY KCG I A +F + E D + W
Sbjct: 253 HLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 312
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ +IGGLA+HG +++ LFH+M+ K+ P++ITF+ LL+AC+H G E +F S+K
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK- 371
Query: 379 DHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
+ E K EHY C+VD+L RAG + A + I EMP+KP + G+LL+ C + NLE+A
Sbjct: 372 ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAE 431
Query: 439 IAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEV 498
+ L+ L+P + G YV L+N+YA + ++ MR+ + K +KK G S+++++
Sbjct: 432 TVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTR 491
Query: 499 QEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYED 538
F++ D T I+ +L+L + +D+ Y+D
Sbjct: 492 HRFIAHDKTHFHSDKIYAVLQLTGAWMN-----LDVDYDD 526
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/509 (36%), Positives = 294/509 (57%), Gaps = 52/509 (10%)
Query: 17 FVPILQSCENLIE---------LKKIHTQILKYLLSQSN-----FLVTKMIDVCNSGGDL 62
+P+++ C NL++ L++IH +++ +S S+ L+ ++ + S +
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSL-PSPPPM 69
Query: 63 AYASLLFKQVKEP-NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLP 121
+YA +F ++++P NVF++N +IR Y A +LY++M R L+ PD T P
Sbjct: 70 SYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREM----RVSGLVEPDTHTYP 125
Query: 122 FVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDR 181
F+IK+ + LG+ IH+ V + G S +N+LL LY C
Sbjct: 126 FLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC---------------- 169
Query: 182 DIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQ 241
G + A +FDKMP +V+W ++I+G+ G EAL ++ +M
Sbjct: 170 ---------------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN 214
Query: 242 MVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCIN 301
GI+PD +IVS+L ACA++G+L LG+ +H+Y K L R N L+++Y +CG +
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE 274
Query: 302 QASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSAC 360
+A LFD+MV+++ VSW+++I GLA +G +AI LF M+ + + P +ITF+G+L AC
Sbjct: 275 EAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC 334
Query: 361 AHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKI 420
+H G EG YF M+ ++ IE +IEH+GC+VDLL RAG++ +A I+ MPM+P+ I
Sbjct: 335 SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 394
Query: 421 WGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRS 480
W +LL +C + + ++A A +L LEP +G+YVLLSN+YA RW DV ++RK +
Sbjct: 395 WRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLR 454
Query: 481 KSMKKTPGCSLIEVNNEVQEFVSGDDTKP 509
+KK PG SL+EV N V EF+ GD + P
Sbjct: 455 DGVKKVPGHSLVEVGNRVHEFLMGDKSHP 483
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/463 (39%), Positives = 278/463 (60%), Gaps = 11/463 (2%)
Query: 61 DLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL-AINLYKQMLRDPRTGSLILPDKFT 119
DLA A F+Q+ E ++ +N+MI + N Y L A++++ +MLRD SL+ PD+FT
Sbjct: 229 DLAMAQ--FEQMAERDIVTWNSMISGF-NQRGYDLRALDIFSKMLRD----SLLSPDRFT 281
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L V+ +CA L +GKQIH+H+ G I NAL+ +Y +C + A ++ E+
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 180 DRD--IVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVF 237
+D I + L+ GY +LG M +A+ +F + +V+WTAMI GY GSY EA+++F
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 238 RQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKC 297
R M G P+ ++ ++L + L SL G+ IH K+ + + NALI MY K
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGL 356
G I AS+ FD + ERD VSW+++I LA HG A +A+ LF M + P+ IT++G+
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 357 LSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
SAC H G N+G YFD MK I + HY C+VDL GRAG L +A IE+MP++P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 417 DAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRK 476
D WGSLLS+CR + N+++ +A E LL+LEPE++G Y L+N+Y+ G+WE+ +++RK
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 477 LIRSKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLE 519
++ +KK G S IEV ++V F D T P +I+ ++
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMK 684
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 198/427 (46%), Gaps = 42/427 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+ F Q+ + + + MI Y N Y AI + M+++ I P +FT
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG-----IEPTQFT 148
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L V+ S A C GK++H+ + K GL+ + N+LL++Y KC + + A VF+ M
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
RDI +WN +I+ + ++GQM A F++M IV+W +MISG+ G ALD+F +
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 240 MQMVG-IEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
M + PD ++ SVL ACA L L +G+ IH + ++ NALI MY +CG
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 299 CI---------------------------------NQASQLFDQMVERDVVSWSTVIGGL 325
+ NQA +F + +RDVV+W+ +I G
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
HG +AI+LF M PN T +LS + + G S + I +
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI-YS 447
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
+ L+ + +AG + A + + + D W S++ + + + E A+ E +L
Sbjct: 448 VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 446 V--LEPE 450
+ L P+
Sbjct: 508 MEGLRPD 514
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 158/352 (44%), Gaps = 50/352 (14%)
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQ--------IHAHVCKFGLKSHSITENALLDLYGKCD 166
P +L +++ C LL S+ K +H V K GL N L+++Y K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
+ A K+F+EM R +WN ++S Y++ G M FD++P VSWT MI GY +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
IG Y +A+ V M GIEP + ++ +VL + A +E G+ +H + K L +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 287 CNALIEMYIKCGCINQASQLFD-------------------------------QMVERDV 315
N+L+ MY KCG A +FD QM ERD+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFD 374
V+W+++I G G +A+ +F +M R + P+ T +LSACA N +
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA-----NLEKLCIG 298
Query: 375 SMKRDHHIEHKIEHYG----CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
H + + G L+ + R G ++ A +IE+ K D KI G
Sbjct: 299 KQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK-DLKIEG 349
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 149/347 (42%), Gaps = 56/347 (16%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GD+ A +F +K+ +V + AMI Y + YG AINL++ M+ G P+ +T
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV-----GGGQRPNSYT 415
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
L ++ + L S GKQIH K G NAL+ +Y K + A + F+ +
Sbjct: 416 LAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR 475
Query: 180 -DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+RD V+W ++I A+ G ++ AL++F
Sbjct: 476 CERDTVSWTSMIIALAQHGHAEE-------------------------------ALELFE 504
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELG-EWIHMYCDKNHLLRRTVICNALIEMYIKC 297
M M G+ PD I+ V V AC G + G ++ M D + ++ +++++ +
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564
Query: 298 GCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFH---EMQRLKVPPNDITF 353
G + +A + ++M +E DVV+W G L + + HK I L E L P N +
Sbjct: 565 GLLQEAQEFIEKMPIEPDVVTW----GSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 620
Query: 354 IGLLSACAHTGFWNEGLMYFDSMKRDH----------HIEHKIEHYG 390
L + + G W E SMK ++HK+ +G
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFG 667
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 301/530 (56%), Gaps = 12/530 (2%)
Query: 17 FVPILQSCENLIELKKIHTQIL-KYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
F+ ++++ L E+K+IH I+ LS N+L ++ G+ A +F ++ P
Sbjct: 136 FLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHP 195
Query: 76 NVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
+V +N MI Y A+ LY +M+ D I PD++T+ ++ C L L
Sbjct: 196 DVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG-----IEPDEYTVLSLLVCCGHLSDIRL 250
Query: 136 GKQIHAHVCKFG--LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
GK +H + + G S+ I NALLD+Y KC E A + F+ M +D+ +WN ++ G+
Sbjct: 251 GKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGF 310
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL-DVFRQMQMV-GIEPDEIS 251
RLG M+ A+ +FD+MP +VSW +++ GY+ G + ++F +M +V ++PD ++
Sbjct: 311 VRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVT 370
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
+VS++ A G L G W+H + L + +ALI+MY KCG I +A +F
Sbjct: 371 MVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT 430
Query: 312 ERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLM 371
E+DV W+++I GLA HG +A+ LF MQ V PN++T + +L+AC+H+G EGL
Sbjct: 431 EKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLH 490
Query: 372 YFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIE-EMPMKPDAKIWGSLLSSCRT 430
F+ MK + + EHYG LVDLL RAGR+++A +I++ +MPM+P +WGS+LS+CR
Sbjct: 491 VFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRG 550
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
++E A +A+ LL LEPE G YVLLSNIYA GRW + R+ + ++ +KKT G S
Sbjct: 551 GEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Query: 491 LIEVNNEVQEFVSGD-DTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539
+ + FV+ + P +I +L+ L D +D++ +I
Sbjct: 611 SVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPKLDCLDLLEIEI 660
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 218/473 (46%), Gaps = 96/473 (20%)
Query: 12 ELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSGGDLAYASLLF 69
+L + + +L++C + + K++ QI+++ L F ++++I +L A LLF
Sbjct: 32 QLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLF 91
Query: 70 KQ-VKEPNVFLYNAMIRAYTN--NHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126
PNVF+YN MI A ++ N +G LY M+R + PD+ T +++K+
Sbjct: 92 LNFTPNPNVFVYNTMISAVSSSKNECFG----LYSSMIRHR-----VSPDRQTFLYLMKA 142
Query: 127 CAGLLCPSLGKQIHAHVCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVA 185
+ L S KQIH H+ G L + N+L+ Y + A KVF M D+ +
Sbjct: 143 SSFL---SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSS 199
Query: 186 WNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGI 245
+N +I GYA+ G++ EAL ++ +M GI
Sbjct: 200 FNVMIVGYAK--------------------------QGFS-----LEALKLYFKMVSDGI 228
Query: 246 EPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRT--VICNALIEMYIKC------ 297
EPDE +++S+L C L + LG+ +H + ++ + + ++ NAL++MY KC
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 298 -------------------------GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAH 332
G + A +FDQM +RD+VSW++++ G + G
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 333 KAIH-LFHEMQRL-KVPPNDITFIGLLSACAHT-----GFWNEGLMYFDSMKRDHHIEHK 385
+ + LF+EM + KV P+ +T + L+S A+ G W GL+ +K D +
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS-- 406
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
L+D+ + G +++A + + K D +W S+++ + N + A+
Sbjct: 407 ----SALIDMYCKCGIIERAFMVFKTATEK-DVALWTSMITGLAFHGNGQQAL 454
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 332 bits (850), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 280/495 (56%), Gaps = 42/495 (8%)
Query: 19 PIL--QSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSG---GDLAYASLLFKQVK 73
PIL C +L EL +I +K + +F V K+I+ C ++YA LF+ +
Sbjct: 32 PILLISKCNSLRELMQIQAYAIKSHIEDVSF-VAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
EP++ ++N+M R Y+ +L+ ++L D ILPD +T P ++K+CA
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDG-----ILPDNYTFPSLLKACAVAKAL 145
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
G+Q+H K GL + L+++Y +C+++
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDV------------------------- 180
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
AR +FD++ +V + AMI+GY EAL +FR+MQ ++P+EI+++
Sbjct: 181 ------DSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLL 234
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SVL +CA LGSL+LG+WIH Y K+ + + ALI+M+ KCG ++ A +F++M +
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D +WS +I ANHGKA K++ +F M+ V P++ITF+GLL+AC+HTG EG YF
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
M I I+HYG +VDLL RAG L+ A I+++P+ P +W LL++C +++N
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
L++A E + L+ G+YV+LSN+YA++ +WE V +RK+++ + K PGCS IE
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Query: 494 VNNEVQEFVSGDDTK 508
VNN V EF SGD K
Sbjct: 475 VNNVVHEFFSGDGVK 489
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 162/325 (49%), Gaps = 12/325 (3%)
Query: 154 TENALLDLYGKCDEL-----IEAHKVFEEMTDRDIVA-WNNLISGYARLGQMKKARMLFD 207
T+N +L L KC+ L I+A+ + + D VA N + M AR LF+
Sbjct: 29 TQNPIL-LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFE 87
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
M IV + +M GY+ + E +F ++ GI PD + S+L ACA +LE
Sbjct: 88 AMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEE 147
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLAN 327
G +H K L +C LI MY +C ++ A +FD++VE VV ++ +I G A
Sbjct: 148 GRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYAR 207
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIE 387
+ ++A+ LF EMQ + PN+IT + +LS+CA G + G + + H ++
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHSFCKYVK 266
Query: 388 HYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV- 446
L+D+ + G LD A++I E+M K D + W +++ + + E +++ E +
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAEKSMLMFERMRSE 325
Query: 447 -LEPEDTGNYVLLSNIYAKHGRWED 470
++P++ ++ L N + GR E+
Sbjct: 326 NVQPDEI-TFLGLLNACSHTGRVEE 349
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 140/277 (50%), Gaps = 20/277 (7%)
Query: 5 IGALSIKELEDRFVP-------ILQSC---ENLIELKKIHTQILKYLLSQSNFLVTKMID 54
+ +L ++ LED +P +L++C + L E +++H +K L + ++ +I+
Sbjct: 113 VFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLIN 172
Query: 55 VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL 114
+ D+ A +F ++ EP V YNAMI Y + A++L+++M G +
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM-----QGKYLK 227
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P++ TL V+ SCA L LGK IH + K + AL+D++ KC L +A +
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSI 287
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTI----VSWTAMISGYTHIGSY 230
FE+M +D AW+ +I YA G+ +K+ ++F++M + +++ +++ +H G
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 231 AEALDVFRQM-QMVGIEPDEISIVSVLPACAQLGSLE 266
E F QM GI P S++ ++ G+LE
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLE 384
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 329 bits (844), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 284/506 (56%), Gaps = 8/506 (1%)
Query: 17 FVPILQSCEN---LIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F+PIL++ L E ++H K F+ T +D+ S G + YA +F ++
Sbjct: 114 FLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS 173
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
+V +N MI Y L A L+++M S ++PD+ L ++ +C
Sbjct: 174 HRDVVTWNTMIERYCRFGLVDEAFKLFEEM-----KDSNVMPDEMILCNIVSACGRTGNM 228
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
+ I+ + + ++ + AL+ +Y + A + F +M+ R++ ++SGY
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGY 288
Query: 194 ARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIV 253
++ G++ A+++FD+ +V WT MIS Y EAL VF +M GI+PD +S+
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
SV+ ACA LG L+ +W+H N L I NALI MY KCG ++ +F++M R
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
+VVSWS++I L+ HG+A A+ LF M++ V PN++TF+G+L C+H+G EG F
Sbjct: 409 NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 468
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
SM +++I K+EHYGC+VDL GRA L +AL +IE MP+ + IWGSL+S+CR +
Sbjct: 469 ASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE 528
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
LE+ A + +L LEP+ G VL+SNIYA+ RWEDV +R+++ K++ K G S I+
Sbjct: 529 LELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRID 588
Query: 494 VNNEVQEFVSGDDTKPFLKDIFWLLE 519
N + EF+ GD +I+ L+
Sbjct: 589 QNGKSHEFLIGDKRHKQSNEIYAKLD 614
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 195/441 (44%), Gaps = 74/441 (16%)
Query: 21 LQSCENLIELKKIHTQILKYLLSQ--SNFLVTKMIDVCNSGGDLAYASLLFKQVKEP-NV 77
L C++L +K++H IL+ +++ ++FL + S +L+YA +F + P
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSS--SSINLSYALNVFSSIPSPPES 76
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
++N +R + + I L+ Q +R G + D+F+ ++K+ + + G
Sbjct: 77 IVFNPFLRDLSRSSEPRATI-LFYQRIR--HVGGRL--DQFSFLPILKAVSKVSALFEGM 131
Query: 138 QIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLG 197
++H K E +D+Y C + A VF+EM+ RD+V WN +I Y R G
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 198 QMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLP 257
L D EA +F +M+ + PDE+ + +++
Sbjct: 192 -------LVD------------------------EAFKLFEEMKDSNVMPDEMILCNIVS 220
Query: 258 ACAQLGSLELGEWIHMYCDKN------HLL-------------------------RRTVI 286
AC + G++ I+ + +N HLL R +
Sbjct: 221 ACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV 280
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
A++ Y KCG ++ A +FDQ ++D+V W+T+I +A+ +F EM +
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI 340
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQAL 406
P+ ++ ++SACA+ G ++ + S + +E ++ L+++ + G LD
Sbjct: 341 KPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 407 NIIEEMPMKPDAKIWGSLLSS 427
++ E+MP + + W S++++
Sbjct: 400 DVFEKMPRR-NVVSWSSMINA 419
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 328 bits (842), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/497 (36%), Positives = 274/497 (55%), Gaps = 42/497 (8%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
++H IL Q FL TK+I + + G + YA +F + ++ ++++NA+ RA T
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS----LGKQIHAHVCKFG 147
+ LY +M R G + D+FT +V+K+C C GK+IHAH+ + G
Sbjct: 158 HGEEVLGLYWKM---NRIG--VESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG 212
Query: 148 LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFD 207
SH L+D+Y AR G + A +F
Sbjct: 213 YSSHVYIMTTLVDMY-------------------------------ARFGCVDYASYVFG 241
Query: 208 KMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM--QMVGIEPDEISIVSVLPACAQLGSL 265
MP +VSW+AMI+ Y G EAL FR+M + P+ +++VSVL ACA L +L
Sbjct: 242 GMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAAL 301
Query: 266 ELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGL 325
E G+ IH Y + L + +AL+ MY +CG + ++FD+M +RDVVSW+++I
Sbjct: 302 EQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSY 361
Query: 326 ANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHK 385
HG KAI +F EM P +TF+ +L AC+H G EG F++M RDH I+ +
Sbjct: 362 GVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQ 421
Query: 386 IEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL 445
IEHY C+VDLLGRA RLD+A ++++M +P K+WGSLL SCR + N+E+A A L
Sbjct: 422 IEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF 481
Query: 446 VLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVNNEVQEFVSGD 505
LEP++ GNYVLL++IYA+ W++V R++KL+ + ++K PG +EV ++ FVS D
Sbjct: 482 ALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVD 541
Query: 506 DTKPFLKDIFWLLELLA 522
+ P ++ I L LA
Sbjct: 542 EFNPLMEQIHAFLVKLA 558
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 189/406 (46%), Gaps = 62/406 (15%)
Query: 4 RIGALSIKELEDRFVP--ILQSC-------ENLIELKKIHTQILKYLLSQSNFLVTKMID 54
RIG S DRF +L++C +L++ K+IH + + S +++T ++D
Sbjct: 171 RIGVES-----DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 55 VCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLIL 114
+ G + YAS +F + NV ++AMI Y N A+ +++M+R+ + S
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS--- 282
Query: 115 PDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 174
P+ T+ V+++CA L GK IH ++ + GL S +AL+ +YG+C +L +V
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 175 FEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEAL 234
F+ M DRD+V+WN+LIS Y G KK A+
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKK-------------------------------AI 371
Query: 235 DVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNA-LIEM 293
+F +M G P ++ VSVL AC+ G +E G+ + ++H ++ + A ++++
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDL 431
Query: 294 YIKCGCINQASQLFDQM-VERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
+ +++A+++ M E W +++G HG A + L+ P N
Sbjct: 432 LGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE-PKNAGN 490
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGR 398
++ L A W+E +KR ++ +EH G L L GR
Sbjct: 491 YVLLADIYAEAQMWDE-------VKR---VKKLLEHRG-LQKLPGR 525
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 8/287 (2%)
Query: 166 DELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYT 225
D L + + +D+D LI Y+ LG + AR +FDK TI W A+ T
Sbjct: 95 DALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALT 154
Query: 226 HIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACA----QLGSLELGEWIHMYCDKNHLL 281
G E L ++ +M +G+E D + VL AC + L G+ IH + +
Sbjct: 155 LAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS 214
Query: 282 RRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEM 341
I L++MY + GC++ AS +F M R+VVSWS +I A +GKA +A+ F EM
Sbjct: 215 SHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 342 QR--LKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRA 399
R PN +T + +L ACA +G + + R ++ + LV + GR
Sbjct: 275 MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR-RGLDSILPVISALVTMYGRC 333
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLV 446
G+L+ + + M + D W SL+SS + + A+ E +L
Sbjct: 334 GKLEVGQRVFDRMHDR-DVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 10/216 (4%)
Query: 215 VSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMY 274
+S +I G +A+ V Q P + + ++ C SL +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 275 CDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKA 334
N + + LI MY G ++ A ++FD+ +R + W+ + L G +
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 335 IHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS----MKRDHHIEHKIEHYG 390
+ L+ +M R+ V + T+ +L AC + LM + R + H +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH-VYIMT 221
Query: 391 CLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
LVD+ R G +D A + MP++ + W ++++
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIA 256
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 328 bits (842), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 289/537 (53%), Gaps = 9/537 (1%)
Query: 2 AARIGALSIKELEDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMID--VCNSG 59
A + GA I + + V + C + L ++ +L + T M+ V N
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
DL LL + YNAMI Y N Y A+ + ++M+ S I D+FT
Sbjct: 235 FDLG-EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMV-----SSGIELDEFT 288
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
P VI++CA LGKQ+HA+V + S +N+L+ LY KC + EA +FE+M
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+D+V+WN L+SGY G + +A+++F +M I+SW MISG G E L +F
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ G EP + + + +CA LG+ G+ H K NALI MY KCG
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+ +A Q+F M D VSW+ +I L HG +A+ ++ EM + + P+ IT + +L+A
Sbjct: 468 VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+H G ++G YFDSM+ + I +HY L+DLL R+G+ A ++IE +P KP A+
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE 587
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IW +LLS CR + N+E+ +IA + L L PE G Y+LLSN++A G+WE+V+R+RKL+R
Sbjct: 588 IWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMR 647
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMY 536
+ +KK CS IE+ +V F+ D + P + ++ L+ L R V D +
Sbjct: 648 DRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSF 704
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 205/421 (48%), Gaps = 68/421 (16%)
Query: 10 IKELEDRFVPILQSC-----ENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAY 64
++ + +R+ L+ C +L + +H I+ + ++ ++IDV +L Y
Sbjct: 8 VRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNY 67
Query: 65 ASLLFKQVKEPN----------------------VF-----------LYNAMIRAYTNNH 91
A LF ++ EP+ VF +YNAMI +++N+
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK----QIHAHVCKFG 147
AINL+ +M + PD FT V+ AGL + + Q HA K G
Sbjct: 128 DGYSAINLFCKMKHEG-----FKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSG 179
Query: 148 LKSHSITENALLDLYGKCDE----LIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKAR 203
+ NAL+ +Y KC L A KVF+E+ ++D +W +++GY + G
Sbjct: 180 AGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGE 239
Query: 204 MLFDKMPYT-TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQL 262
L + M +V++ AMISGY + G Y EAL++ R+M GIE DE + SV+ ACA
Sbjct: 240 ELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATA 299
Query: 263 GSLELGEWIHMYCDKNHLLRRTVIC----NALIEMYIKCGCINQASQLFDQMVERDVVSW 318
G L+LG+ +H Y +LRR N+L+ +Y KCG ++A +F++M +D+VSW
Sbjct: 300 GLLQLGKQVHAY-----VLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSW 354
Query: 319 STVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKR 378
+ ++ G + G +A +F EM+ N ++++ ++S A GF EGL F MKR
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKE----KNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 379 D 379
+
Sbjct: 411 E 411
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 326 bits (836), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 288/514 (56%), Gaps = 14/514 (2%)
Query: 13 LEDRFVPILQSCENLIELKKIHTQI-LKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQ 71
L + + + C I+ K+ Q+ L+ L S +N M+ G L A ++F
Sbjct: 84 LSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNN-----MVSGYVKSGMLVRARVVFDS 138
Query: 72 VKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLL 131
+ E +V +N M+ Y + A+ YK+ R S I ++F+ ++ +C
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR-----SGIKFNEFSFAGLLTACVKSR 193
Query: 132 CPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
L +Q H V G S+ + +++D Y KC ++ A + F+EMT +DI W LIS
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GYA+LG M+ A LF +MP VSWTA+I+GY GS ALD+FR+M +G++P++ +
Sbjct: 254 GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 252 IVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV 311
S L A A + SL G+ IH Y + ++ ++ ++LI+MY K G + + ++F
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 312 ER-DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGL 370
++ D V W+T+I LA HG HKA+ + +M + +V PN T + +L+AC+H+G EGL
Sbjct: 374 DKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL 433
Query: 371 MYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
+F+SM H I EHY CL+DLLGRAG + + IEEMP +PD IW ++L CR
Sbjct: 434 RWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRI 493
Query: 431 YSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
+ N E+ A + L+ L+PE + Y+LLS+IYA HG+WE V ++R +++ + + K S
Sbjct: 494 HGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVS 553
Query: 491 LIEVNNEVQEFVSGDDTKPFLK--DIFWLLELLA 522
IE+ +V+ F D + + +I+++L LA
Sbjct: 554 WIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLA 587
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 38/345 (11%)
Query: 120 LPF-----VIKSCAGLLCPSLGKQIHAHVCKFGLKS-HSITENALLDLYGKCDELIEAHK 173
LPF +++ C GK IH H+ G K +++ N L+ +Y KC + I+A K
Sbjct: 44 LPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACK 103
Query: 174 VFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEA 233
VF++M R++ +WNN++SGY + G + +AR++FD MP +VSW M+ GY G+ EA
Sbjct: 104 VFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 234 LDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEM 293
L +++ + GI+ +E S +L AC + L+L H L V+ ++I+
Sbjct: 164 LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 294 YIKCGCINQASQLFDQMVERDV-------------------------------VSWSTVI 322
Y KCG + A + FD+M +D+ VSW+ +I
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALI 283
Query: 323 GGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHI 382
G G ++A+ LF +M L V P TF L A A G M R +
Sbjct: 284 AGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVR 343
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
+ I L+D+ ++G L+ + + K D W +++S+
Sbjct: 344 PNAIV-ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISA 387
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 54/300 (18%)
Query: 219 AMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKN 278
+ +S + ++A+ + GI + S+L C SL+ G+WIH +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 279 HLLR-RTVICNALIEMYIKCGCINQASQLFDQ---------------------------- 309
R T++ N LI MY+KCG A ++FDQ
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 310 ---MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFW 366
M ERDVVSW+T++ G A G H+A+ + E +R + N+ +F GLL+AC +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 367 NEGLMYFDSMKRDHHIEHKIEHY------GC-LVDLLGRAGRLDQALNIIEEMPMKPDAK 419
+ R H + + + C ++D + G+++ A +EM +K D
Sbjct: 196 Q--------LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DIH 246
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IW +L+S ++E A E L PE N V + + A + R +R L R
Sbjct: 247 IWTTLISGYAKLGDME----AAEKLFCEMPEK--NPVSWTALIAGYVRQGSGNRALDLFR 300
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 326 bits (835), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 259/469 (55%), Gaps = 44/469 (9%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G + A LF + +VF + AM+ Y N + A L+ +M P++
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM-----------PER-- 310
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
+ ++ NA+L Y + + + A ++F+ M
Sbjct: 311 -------------------------------NEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
R++ WN +I+GYA+ G++ +A+ LFDKMP VSW AMI+GY+ G EAL +F Q
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M+ G + S S L CA + +LELG+ +H K + NAL+ MY KCG
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
I +A+ LF +M +D+VSW+T+I G + HG A+ F M+R + P+D T + +LSA
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
C+HTG ++G YF +M +D+ + +HY C+VDLLGRAG L+ A N+++ MP +PDA
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 420 IWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIR 479
IWG+LL + R + N E+A A + + +EPE++G YVLLSN+YA GRW DV ++R +R
Sbjct: 580 IWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMR 639
Query: 480 SKSMKKTPGCSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRA 528
K +KK PG S IE+ N+ F GD+ P +IF LE L L +A
Sbjct: 640 DKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKA 688
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 208/457 (45%), Gaps = 56/457 (12%)
Query: 36 QILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGL 95
++ K + S+ MI G+ A LF ++ E ++ +N MI+ Y N G
Sbjct: 85 RVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGK 144
Query: 96 AINLYKQM--------------------LRDPRTGSLILPDKFTLPFVIKSCAGLLCPSL 135
A L++ M + D R+ +P+K + S LL +
Sbjct: 145 ARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV-----SWNALLSAYV 199
Query: 136 GKQIHAHVCKFGLKSHS----ITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLIS 191
C KS ++ N LL + K +++EA + F+ M RD+V+WN +I+
Sbjct: 200 QNSKMEEACML-FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIIT 258
Query: 192 GYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEIS 251
GYA+ G++ +AR LFD+ P + +WTAM+SGY EA ++F +M E +E+S
Sbjct: 259 GYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVS 314
Query: 252 IVSVLPACAQLGSLELGEWIH--MYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++L Q +E+ + + M C R N +I Y +CG I++A LFD+
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPC------RNVSTWNTMITGYAQCGKISEAKNLFDK 368
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M +RD VSW+ +I G + G + +A+ LF +M+R N +F LS CA G
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVD-----LLGRAGRLDQALNIIEEMPMKPDAKIWGSL 424
+ + + GC V + + G +++A ++ +EM K D W ++
Sbjct: 429 KQLHGRLVKGGY------ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTM 481
Query: 425 LSSCRTYSNLEIAVIAMEHLLV--LEPEDTGNYVLLS 459
++ + E+A+ E + L+P+D +LS
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 144/342 (42%), Gaps = 70/342 (20%)
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
G+C+E A +VF+ M V++N +ISGY R G+ + AR LFD+MP +VSW MI
Sbjct: 78 GRCNE---ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIK 134
Query: 223 GYTHIGSYAEALDVFRQMQMVGI---------------------------EPDEISIVSV 255
GY + +A ++F M + E +++S ++
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 256 LPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDV 315
L A Q +E E ++ + + V N L+ ++K I +A Q FD M RDV
Sbjct: 195 LSAYVQNSKME--EACMLFKSRENWA--LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV 250
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDI-TFIGLLSACAHTGFWNEGLMYFD 374
VSW+T+I G A GK +A LF E P D+ T+ ++S E FD
Sbjct: 251 VSWNTIITGYAQSGKIDEARQLFDE-----SPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 375 SMKRDHHIE--------------------------HKIEHYGCLVDLLGRAGRLDQALNI 408
M + + + + ++ + G++ +A N+
Sbjct: 306 KMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 409 IEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPE 450
++MP K D W ++++ YS + A+ + +E E
Sbjct: 366 FDKMP-KRDPVSWAAMIAG---YSQSGHSFEALRLFVQMERE 403
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D DI WN IS Y R G+ +A +F +MP + VS+ MISGY G + A +F +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVIC--NALIEMYIKC 297
M E D +S ++ + + LG+ ++ ++ +C N ++ Y +
Sbjct: 121 MP----ERDLVSWNVMIKGYVR--NRNLGKARELF----EIMPERDVCSWNTMLSGYAQN 170
Query: 298 GCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLL 357
GC++ A +FD+M E++ VSW+ ++ + K +A LF + + +++ LL
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLL 226
Query: 358 SACAHTGFWNEGLMYFDSMK-RDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKP 416
E +FDSM RD + + ++ ++G++D+A + +E P++
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRD------VVSWNTIITGYAQSGKIDEARQLFDESPVQ- 279
Query: 417 DAKIWGSLLS 426
D W +++S
Sbjct: 280 DVFTWTAMVS 289
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 17 FVPILQSCENLIEL---KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
F L +C +++ L K++H +++K F+ ++ + G + A+ LFK++
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
++ +N MI Y+ + +A+ ++ M R+ + PD T+ V+ +C+
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG-----LKPDDATMVAVLSACSHTGLV 526
Query: 134 SLGKQ-IHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT-DRDIVAWNNLIS 191
G+Q + +G+ +S ++DL G+ L +AH + + M + D W L+
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 192 GYARLGQMKKARMLFDKM 209
G + A DK+
Sbjct: 587 ASRVHGNTELAETAADKI 604
>sp|Q9LJJ1|PP259_ARATH Putative pentatricopeptide repeat-containing protein At3g28640
OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1
Length = 504
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/513 (35%), Positives = 290/513 (56%), Gaps = 44/513 (8%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMID----VCNSGGDLAYASLLFKQVKEPNV 77
Q C + ++K H+ + + L ++ + ++K++ + N YAS +F ++ PN
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F+Y+ MIR + + L + + M+++ I P T F+I +C S+GK
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEED--IAPSYLTFHFLIVACLKACFFSVGK 136
Query: 138 QIHAHVCKFGL-KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
QIH V K G+ S S + +L +Y + L++A KVF
Sbjct: 137 QIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVF--------------------- 175
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
D++P +V W +++GY G +E L+VFR+M + G+EPDE S+ + L
Sbjct: 176 ----------DEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTAL 225
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDV 315
ACAQ+G+L G+WIH + K + V + AL++MY KCGCI A ++F ++ R+V
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNV 285
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFD 374
SW+ +IGG A +G A KA+ ++R + P+ + +G+L+ACAH GF EG +
Sbjct: 286 FSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLE 345
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+M+ + I K EHY C+VDL+ RAGRLD ALN+IE+MPMKP A +WG+LL+ CRT+ N+
Sbjct: 346 NMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 435 EIAVIAMEHLLVLEP----EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
E+ +A+++LL LE E+ V LSNIY R + S++R +I + ++KTPG S
Sbjct: 406 ELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 465
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
++EV+ V +FVSGD + P L I ++ LL++
Sbjct: 466 VLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSV 498
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 273/501 (54%), Gaps = 40/501 (7%)
Query: 18 VPILQSCEN--LIEL-KKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKE 74
V + C + LI L + +H+ +K S+ + ++D+ + GDL A +F+++ +
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 75 PNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPS 134
+V Y +MI Y L G A+ L+++M + I PD +T+ V+ CA
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-----ISPDVYTVTAVLNCCARYRLLD 414
Query: 135 LGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYA 194
GK++H + + L NAL+D+Y A
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMY-------------------------------A 443
Query: 195 RLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPDEISIV 253
+ G M++A ++F +M I+SW +I GY+ EAL +F + + PDE ++
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 254 SVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVER 313
VLPACA L + + G IH Y +N + N+L++MY KCG + A LFD + +
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 563
Query: 314 DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYF 373
D+VSW+ +I G HG +AI LF++M++ + ++I+F+ LL AC+H+G +EG +F
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 623
Query: 374 DSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSN 433
+ M+ + IE +EHY C+VD+L R G L +A IE MP+ PDA IWG+LL CR + +
Sbjct: 624 NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHD 683
Query: 434 LEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIE 493
+++A E + LEPE+TG YVL++NIYA+ +WE V R+RK I + ++K PGCS IE
Sbjct: 684 VKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Query: 494 VNNEVQEFVSGDDTKPFLKDI 514
+ V FV+GD + P ++I
Sbjct: 744 IKGRVNIFVAGDSSNPETENI 764
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 180/376 (47%), Gaps = 40/376 (10%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
GDL AS +F +VK +N ++ + + +I L+K+M+ S + D +T
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM-----SSGVEMDSYT 197
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
V KS + L G+Q+H + K G + N+L+ Y K + A KVF+EMT
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
+RD+++WN++I+GY G +K L VF Q
Sbjct: 258 ERDVISWNSIINGYVSNGLAEK-------------------------------GLSVFVQ 286
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
M + GIE D +IVSV CA + LG +H K R CN L++MY KCG
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
++ A +F +M +R VVS++++I G A G A +A+ LF EM+ + P+ T +L+
Sbjct: 347 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
CA +EG + +K ++ + I L+D+ + G + +A + EM +K D
Sbjct: 407 CARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DII 464
Query: 420 IWGSLLS--SCRTYSN 433
W +++ S Y+N
Sbjct: 465 SWNTIIGGYSKNCYAN 480
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 193 YARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISI 252
Y G +K+A +FD++ + W +++ G ++ ++ +F++M G+E D +
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 253 VSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVE 312
V + + L S+ GE +H + K+ R + N+L+ Y+K ++ A ++FD+M E
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 313 RDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMY 372
RDV+SW+++I G ++G A K + +F +M + + T + + + CA + + G
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA- 317
Query: 373 FDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMP 413
S+ + L+D+ + G LD A + EM
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
D ++ SVL CA SL+ G+ + + N + + + + L MY CG + +AS++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA-----CAH 362
D++ + W+ ++ LA G +I LF +M V + TF + + H
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 363 TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWG 422
G G + + + + LV + R+D A + +EM + D W
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNS------LVAFYLKNQRVDSARKVFDEMTER-DVISWN 265
Query: 423 SLLS 426
S+++
Sbjct: 266 SIIN 269
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 274/508 (53%), Gaps = 40/508 (7%)
Query: 17 FVPILQSCENLIELK---KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVK 73
+L++C L LK +IH QIL + + + + +++V GDL AS + +Q++
Sbjct: 190 LTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR 249
Query: 74 EPN-------------------------------VFLYNAMIRAYTNNHLYGLAINLYKQ 102
EP+ V L+N+MI Y N++ A+ L+ +
Sbjct: 250 EPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNE 309
Query: 103 MLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLY 162
M + R D TL VI +C GL GKQ+H H CKFGL + + LLD+Y
Sbjct: 310 MRNETR------EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Query: 163 GKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMIS 222
KC +EA K+F E+ D + N++I Y G++ A+ +F+++ +++SW +M +
Sbjct: 364 SKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTN 423
Query: 223 GYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLR 282
G++ G E L+ F QM + + DE+S+ SV+ ACA + SLELGE + L
Sbjct: 424 GFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDS 483
Query: 283 RTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQ 342
V+ ++LI++Y KCG + ++FD MV+ D V W+++I G A +G+ +AI LF +M
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMS 543
Query: 343 RLKVPPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRL 402
+ P ITF+ +L+AC + G EG F+SMK DH EH+ C+VDLL RAG +
Sbjct: 544 VAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYV 603
Query: 403 DQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIY 462
++A+N++EEMP D +W S+L C + A E ++ LEPE++ YV LS I+
Sbjct: 604 EEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIF 663
Query: 463 AKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
A G WE + +RKL+R ++ K PG S
Sbjct: 664 ATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 196/408 (48%), Gaps = 52/408 (12%)
Query: 59 GGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKF 118
G+L+ A LF + E +V N+++ Y N A+ L+K++ D
Sbjct: 137 AGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN--------FSADAI 188
Query: 119 TLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEM 178
TL V+K+CA L GKQIHA + G++ S ++L+++Y KC +L A + E++
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 179 TDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFR 238
+ D + + LISGYA G++ ++R LFD+ ++ W +MISGY EAL +F
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 239 QMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCG 298
+M+ E D ++ +V+ AC LG LE G+ +H + K L+ V+ + L++MY KCG
Sbjct: 309 EMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 299 C-------------------------------INQASQLFDQMVERDVVSWSTVIGGLAN 327
I+ A ++F+++ + ++SW+++ G +
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 328 HGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD-----SMKRDHHI 382
+G + + FH+M +L +P ++++ ++SACA G F + D +
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVV 487
Query: 383 EHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRT 430
L+DL + G ++ + + M +K D W S++S T
Sbjct: 488 SSS------LIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYAT 528
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 157/350 (44%), Gaps = 76/350 (21%)
Query: 83 MIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAH 142
MI Y +++ + L+ + + M D R + L ++SC+ +L +Q +
Sbjct: 1 MILKYNSSYRFYLSSSFLQAMEVDCRRYYVRL---------LQSCSSRNRETLWRQTNGL 51
Query: 143 VCKFG-LKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI----------- 190
+ K G L S I N LL +Y + ++ A +F+EM DR+ +WN +I
Sbjct: 52 LLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGT 111
Query: 191 --------------------SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSY 230
SG+A+ G++ AR LF+ MP +V+ +++ GY G
Sbjct: 112 SLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYA 171
Query: 231 AEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIH-------MYCD---KNHL 280
EAL +F+++ D I++ +VL ACA+L +L+ G+ IH + CD + L
Sbjct: 172 EEALRLFKELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 281 LRRTVIC---------------------NALIEMYIKCGCINQASQLFDQMVERDVVSWS 319
+ C +ALI Y CG +N++ LFD+ R V+ W+
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWN 288
Query: 320 TVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
++I G + +A+ LF+EM R + + T +++AC GF G
Sbjct: 289 SMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETG 337
>sp|Q9LJI9|PP260_ARATH Pentatricopeptide repeat-containing protein At3g28660
OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1
Length = 504
Score = 318 bits (816), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/513 (35%), Positives = 289/513 (56%), Gaps = 44/513 (8%)
Query: 22 QSCENLIELKKIHTQILKYLLSQSNFLVTKMID----VCNSGGDLAYASLLFKQVKEPNV 77
Q C + ++K H+ + + L ++ + ++K++ + N YAS +F ++ PN
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGK 137
F+Y+ MIR + + L + + M+++ I P T F+I +C S+GK
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEED--ITPSYLTFHFLIVACLKACFFSVGK 136
Query: 138 QIHAHVCKFGL-KSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
QIH V K G+ S + +L +Y +E +F+
Sbjct: 137 QIHCWVVKNGVFLSDGHVQTGVLRIY------VEDKLLFD-------------------- 170
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
AR +FD++P +V W +++GY G +E L+VF++M + GIEPDE S+ + L
Sbjct: 171 -----ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTAL 225
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTV-ICNALIEMYIKCGCINQASQLFDQMVERDV 315
ACAQ+G+L G+WIH + K + V + AL++MY KCGCI A ++F+++ R+V
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNV 285
Query: 316 VSWSTVIGGLANHGKAHKAIHLFHEMQRLK-VPPNDITFIGLLSACAHTGFWNEGLMYFD 374
SW+ +IGG A +G A KA ++R + P+ + +G+L+ACAH GF EG +
Sbjct: 286 FSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+M+ + I K EHY C+VDL+ RAGRLD AL++IE+MPMKP A +WG+LL+ CRT+ N+
Sbjct: 346 NMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 435 EIAVIAMEHLLVLEP----EDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCS 490
E+ +A+++LL LE E+ V LSNIY R + ++R +I + ++KTPG S
Sbjct: 406 ELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
Query: 491 LIEVNNEVQEFVSGDDTKPFLKDIFWLLELLAL 523
L+EV+ V +FVSGD + P L I L+ LL++
Sbjct: 466 LLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSV 498
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 318 bits (815), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 265/445 (59%), Gaps = 9/445 (2%)
Query: 74 EPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCP 133
E N+ +N ++ + + + A+ +++++ PD+ T+ V+ S
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG-----FCPDQVTVSSVLPSVGDSEML 268
Query: 134 SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGY 193
++G+ IH +V K GL +A++D+YGK + +F + + N I+G
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 194 ARLGQMKKARMLFDKMPYTT----IVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDE 249
+R G + KA +F+ T +VSWT++I+G G EAL++FR+MQ+ G++P+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 250 ISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQ 309
++I S+LPAC + +L G H + + HLL + +ALI+MY KCG IN + +F+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 310 MVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEG 369
M +++V W++++ G + HGKA + + +F + R ++ P+ I+F LLSAC G +EG
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 370 LMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCR 429
YF M ++ I+ ++EHY C+V+LLGRAG+L +A ++I+EMP +PD+ +WG+LL+SCR
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 430 TYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGC 489
+N+++A IA E L LEPE+ G YVLLSNIYA G W +V +R + S +KK PGC
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 490 SLIEVNNEVQEFVSGDDTKPFLKDI 514
S I+V N V ++GD + P + I
Sbjct: 629 SWIQVKNRVYTLLAGDKSHPQIDQI 653
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 229/470 (48%), Gaps = 50/470 (10%)
Query: 32 KIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNH 91
+ H +ILK ++ K+I ++ A L+ + + +P ++ ++++I A T
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 92 LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSH 151
L+ +I ++ +M ++PD LP + K CA L +GKQIH C GL
Sbjct: 96 LFTQSIGVFSRMFSHG-----LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 152 SITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPY 211
+ + ++ +Y +C + +A KVF+ M+D+D+V + L+ YAR G +++ + +M
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 212 T----TIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLEL 267
+ IVSW ++SG+ G + EA+ +F+++ +G PD++++ SVLP+ L +
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 268 GEWIHMYCDKNHLLRRTVICNALIEMYIKC------------------------------ 297
G IH Y K LL+ + +A+I+MY K
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 298 -GCINQASQLF----DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDIT 352
G +++A ++F +Q +E +VVSW+++I G A +GK +A+ LF EMQ V PN +T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 353 FIGLLSACAHTGFWNEGLMYFDSMKRDHHIEHKIEHYG-CLVDLLGRAGRLDQALNIIEE 411
+L AC + G R H +++ H G L+D+ + GR++ + +
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIVFNM 448
Query: 412 MPMKPDAKIWGSLLSSCRTYSNLEIAVIAMEHLL--VLEPEDTGNYVLLS 459
MP K + W SL++ + + + E L+ L+P+ LLS
Sbjct: 449 MPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
>sp|Q9FG85|PP415_ARATH Pentatricopeptide repeat-containing protein At5g43790
OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1
Length = 460
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/485 (36%), Positives = 284/485 (58%), Gaps = 44/485 (9%)
Query: 16 RFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEP 75
R + ++ C++L LK+IH QI+ LS + ++K++ + +S L+YA + +Q+ P
Sbjct: 11 RCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNP 69
Query: 76 NVFLYNAMIRAYTNNH---LYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLC 132
+VFLYN +I + +NH LA +LY Q+L + + P++FT P + K+ +G
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSS--RSNFVRPNEFTYPSLFKA-SGFDA 126
Query: 133 P--SLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLI 190
G+ +HAHV KF E + D L+
Sbjct: 127 QWHRHGRALHAHVLKF-----------------------------LEPVNHDRFVQAALV 157
Query: 191 SGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH---IGSYAEALDVFRQMQMVGIEP 247
YA G++++AR LF+++ + +W +++ Y + I S E L +F +MQ + P
Sbjct: 158 GFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRP 214
Query: 248 DEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLF 307
+E+S+V+++ +CA LG G W H+Y KN+L + +LI++Y KCGC++ A ++F
Sbjct: 215 NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 308 DQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWN 367
D+M +RDV ++ +I GLA HG + I L+ + + P+ TF+ +SAC+H+G +
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSS 427
EGL F+SMK + IE K+EHYGCLVDLLGR+GRL++A I++MP+KP+A +W S L S
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 428 CRTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTP 487
+T+ + E IA++HLL LE E++GNYVLLSNIYA RW DV + R+L++ + K+P
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 488 GCSLI 492
G S +
Sbjct: 455 GISTL 459
>sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protein At1g34160
OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2
Length = 581
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 297/529 (56%), Gaps = 44/529 (8%)
Query: 20 ILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVC--NSGGDLAYASLLFKQVKEPNV 77
++Q C + ++K++ + L QS+FL +++++ C + GDL++A +F+ + +P
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLT 68
Query: 78 FLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILP-DKFTLPFVIKSCAGLLCPSLG 136
+NA+IR + + LA + Y+ ML+ + S I D T F +K+CA LC S
Sbjct: 69 NDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
Q+H + + GL + S+ LLD Y K +LI A+K
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK----------------------- 165
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
LFD+MP + SW A+I+G +EA++++++M+ GI E+++V+ L
Sbjct: 166 --------LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAAL 217
Query: 257 PACAQLGSLELGEWI-HMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMV-ERD 314
AC+ LG ++ GE I H Y + N ++ NA I+MY KCG +++A Q+F+Q ++
Sbjct: 218 GACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKS 272
Query: 315 VVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNEGLMYFD 374
VV+W+T+I G A HG+AH+A+ +F +++ + P+D++++ L+AC H G GL F+
Sbjct: 273 VVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFN 332
Query: 375 SMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNL 434
+M +E ++HYGC+VDLL RAGRL +A +II M M PD +W SLL + YS++
Sbjct: 333 NMAC-KGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDV 391
Query: 435 EIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEV 494
E+A IA + + + G++VLLSN+YA GRW+DV R+R + SK +KK PG S IE
Sbjct: 392 EMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEA 451
Query: 495 NNEVQEFVSGDDTKPFLKDIFWLLE--LLALHQDRAKDVIDIMYEDIGE 541
+ EF + D + ++I+ ++ + +D ++ DIGE
Sbjct: 452 KGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGE 500
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 315 bits (807), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 278/506 (54%), Gaps = 37/506 (7%)
Query: 17 FVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMIDVCNSGGDLAYASLLFKQVKEPN 76
+P + ENL K+IH I+++ +S FL + +ID ++ A +F Q +
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 405
Query: 77 VFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAGLLCPSLG 136
V ++ AMI Y +N LY ++ +++ +++ I P++ TL ++ LL LG
Sbjct: 406 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-----ISPNEITLVSILPVIGILLALKLG 460
Query: 137 KQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNLISGYARL 196
+++H + K G + A++D+Y KC
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKC------------------------------- 489
Query: 197 GQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVL 256
G+M A +F+++ IVSW +MI+ + + A+D+FRQM + GI D +SI + L
Sbjct: 490 GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 257 PACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVV 316
ACA L S G+ IH + K+ L + LI+MY KCG + A +F M E+++V
Sbjct: 550 SACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV 609
Query: 317 SWSTVIGGLANHGKAHKAIHLFHEM-QRLKVPPNDITFIGLLSACAHTGFWNEGLMYFDS 375
SW+++I NHGK ++ LFHEM ++ + P+ ITF+ ++S+C H G +EG+ +F S
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRS 669
Query: 376 MKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLE 435
M D+ I+ + EHY C+VDL GRAGRL +A ++ MP PDA +WG+LL +CR + N+E
Sbjct: 670 MTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVE 729
Query: 436 IAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLIEVN 495
+A +A L+ L+P ++G YVL+SN +A WE V+++R L++ + ++K PG S IE+N
Sbjct: 730 LAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Query: 496 NEVQEFVSGDDTKPFLKDIFWLLELL 521
FVSGD P I+ LL L
Sbjct: 790 KRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 177/376 (47%), Gaps = 38/376 (10%)
Query: 60 GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119
G AS LF+ + + +N MI Y + L ++ + +M+ S +LPD T
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI-----SSGVLPDAIT 342
Query: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179
++ S + KQIH ++ + + +AL+D Y KC + A +F +
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQ 239
D+V + TAMISGY H G Y ++L++FR
Sbjct: 403 SVDVVVF-------------------------------TAMISGYLHNGLYIDSLEMFRW 431
Query: 240 MQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGC 299
+ V I P+EI++VS+LP L +L+LG +H + K R I A+I+MY KCG
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491
Query: 300 INQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSA 359
+N A ++F+++ +RD+VSW+++I A AI +F +M + + ++ LSA
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA 551
Query: 360 CAHTGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAK 419
CA+ + G M + H + + L+D+ + G L A+N+ + M K +
Sbjct: 552 CANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIV 609
Query: 420 IWGSLLSSCRTYSNLE 435
W S++++C + L+
Sbjct: 610 SWNSIIAACGNHGKLK 625
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 174/399 (43%), Gaps = 52/399 (13%)
Query: 47 FLVTKMIDVCNSGGDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRD 106
F+ + +I G + S LF +V + + ++N M+ Y I + M D
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 107 PRTGSLILPDKFTLPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCD 166
I P+ T V+ CA L LG Q+H V G+ +N+LL +Y KC
Sbjct: 234 Q-----ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC- 287
Query: 167 ELIEAHKVFEEMTDRDIVAWNNLISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTH 226
G+ A LF M V+W MISGY
Sbjct: 288 ------------------------------GRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 227 IGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVI 286
G E+L F +M G+ PD I+ S+LP+ ++ +LE + IH Y ++ + +
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 287 CNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKV 346
+ALI+ Y KC ++ A +F Q DVV ++ +I G ++G ++ +F + ++K+
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 347 PPNDITFIGLLSACAHTGFWNEGLMYFDSMKRDHH---IEHKIE---HYGC-LVDLLGRA 399
PN+IT + +L G++ + R+ H I+ + + GC ++D+ +
Sbjct: 438 SPNEITLVSILPVI--------GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC 489
Query: 400 GRLDQALNIIEEMPMKPDAKIWGSLLSSCRTYSNLEIAV 438
GR++ A I E + K D W S+++ C N A+
Sbjct: 490 GRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAI 527
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 145/343 (42%), Gaps = 48/343 (13%)
Query: 93 YGLAINLYKQMLRDPRTGSLILPDKFT--LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKS 150
+ AI YK+ L R S L + L ++++C+ GKQ+HA + +
Sbjct: 10 FAPAIAPYKKSL-PLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISG 68
Query: 151 HSITENALLDLYGKCDELIEAHKVFEEMTDR--DIVAWNNLISGYARLGQMKKARMLFDK 208
S T+ +L +Y C + K+F + R I WN++IS + R G +
Sbjct: 69 DSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLN-------- 120
Query: 209 MPYTTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPDEISIVSVLPACAQLGSLELG 268
+AL + +M G+ PD + ++ AC L + +
Sbjct: 121 -----------------------QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 269 EWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSWSTVIGGLANH 328
+++ + + ++LI+ Y++ G I+ S+LFD+++++D V W+ ++ G A
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 329 GKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHT-----GFWNEGLMYFDSMKRDHHIE 383
G I F M+ ++ PN +TF +LS CA G GL+ + + I+
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 384 HKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLS 426
+ L+ + + GR D A + M + D W ++S
Sbjct: 278 NS------LLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMIS 313
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 110/269 (40%), Gaps = 40/269 (14%)
Query: 247 PDEISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQL 306
P +S++ L AC+ L G+ +H + N + + ++ MY CG + ++
Sbjct: 35 PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 307 FDQMVER--DVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAH-- 362
F ++ R + W+++I +G ++A+ + +M V P+ TF L+ AC
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK 152
Query: 363 ----------------------------TGFWNEGLMYFDSMKRDHHIEHKIEHYGCLVD 394
+ G + S D ++ + +++
Sbjct: 153 NFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLN 212
Query: 395 LLGRAGRLDQALNIIEEMPM---KPDAKIWGSLLSSCRTYSNLEIAVIAMEHLLVLEPED 451
+ G LD + M M P+A + +LS C + +++ V + L+V+ D
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV-QLHGLVVVSGVD 271
Query: 452 TGNYV--LLSNIYAKHGRWEDVSRMRKLI 478
+ L ++Y+K GR++D S++ +++
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 315 bits (807), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 284/510 (55%), Gaps = 41/510 (8%)
Query: 14 EDRFVPILQSCENLIELKKIHTQILKYLLSQSNFLVTKMI--DVCNSG--GDLAYASLLF 69
E + +L+ C N+ E K++H + +K L S+ + +SG + YA+ +F
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 70 KQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKSCAG 129
+ + +P F +N MIR Y N + A+ Y +M++ PD FT P ++K+C
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNE-----PDNFTYPCLLKACTR 144
Query: 130 LLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAWNNL 189
L GKQIH V K GL++ D+ N+L
Sbjct: 145 LKSIREGKQIHGQVFKLGLEA-------------------------------DVFVQNSL 173
Query: 190 ISGYARLGQMKKARMLFDKMPYTTIVSWTAMISGYTHIGSYAEALDVFRQM-QMVGIEPD 248
I+ Y R G+M+ + +F+K+ T SW++M+S +G ++E L +FR M ++ +
Sbjct: 174 INMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAE 233
Query: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308
E +VS L ACA G+L LG IH + +N ++ +L++MY+KCGC+++A +F
Sbjct: 234 ESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQ 293
Query: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQRLKVPPNDITFIGLLSACAHTGFWNE 368
+M +R+ +++S +I GLA HG+ A+ +F +M + + P+ + ++ +L+AC+H+G E
Sbjct: 294 KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKE 353
Query: 369 GLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLLSSC 428
G F M ++ +E EHYGCLVDLLGRAG L++AL I+ +P++ + IW + LS C
Sbjct: 354 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 413
Query: 429 RTYSNLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPG 488
R N+E+ IA + LL L + G+Y+L+SN+Y++ W+DV+R R I K +K+TPG
Sbjct: 414 RVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPG 473
Query: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLL 518
S++E+ + FVS D + P K+I+ +L
Sbjct: 474 FSIVELKGKTHRFVSQDRSHPKCKEIYKML 503
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,488,912
Number of Sequences: 539616
Number of extensions: 8480808
Number of successful extensions: 24586
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 17585
Number of HSP's gapped (non-prelim): 2067
length of query: 541
length of database: 191,569,459
effective HSP length: 122
effective length of query: 419
effective length of database: 125,736,307
effective search space: 52683512633
effective search space used: 52683512633
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)