Query 048359
Match_columns 325
No_of_seqs 137 out of 747
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 08:48:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048359.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048359hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 3E-93 6.5E-98 694.2 26.6 277 13-308 94-386 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 1.5E-53 3.3E-58 392.3 22.7 249 28-309 1-263 (263)
3 cd01842 SGNH_hydrolase_like_5 98.1 1.4E-05 3E-10 71.2 8.1 51 142-201 52-103 (183)
4 cd01827 sialate_O-acetylestera 78.4 19 0.00041 30.9 9.2 54 140-202 67-120 (188)
5 cd01834 SGNH_hydrolase_like_2 75.2 1.4 3E-05 37.8 1.1 53 140-199 61-113 (191)
6 cd01838 Isoamyl_acetate_hydrol 74.9 15 0.00033 31.5 7.6 57 140-202 63-119 (199)
7 cd01841 NnaC_like NnaC (CMP-Ne 66.2 32 0.0007 29.1 7.7 53 140-203 51-103 (174)
8 cd01829 SGNH_hydrolase_peri2 S 66.2 4.3 9.2E-05 35.4 2.2 59 140-202 59-120 (200)
9 cd01841 NnaC_like NnaC (CMP-Ne 65.8 3 6.5E-05 35.6 1.1 12 43-54 1-12 (174)
10 COG2845 Uncharacterized protei 64.7 33 0.00072 33.8 8.0 26 41-66 115-140 (354)
11 PF00185 OTCace: Aspartate/orn 63.6 4.9 0.00011 35.0 2.0 25 41-66 1-25 (158)
12 PF13472 Lipase_GDSL_2: GDSL-l 60.4 55 0.0012 26.7 7.9 56 139-204 60-115 (179)
13 cd04501 SGNH_hydrolase_like_4 55.8 80 0.0017 26.9 8.4 48 140-200 59-106 (183)
14 cd01825 SGNH_hydrolase_peri1 S 54.2 5.8 0.00012 34.0 0.9 130 140-308 56-186 (189)
15 cd01835 SGNH_hydrolase_like_3 53.3 6.5 0.00014 34.2 1.1 54 139-200 68-121 (193)
16 cd01844 SGNH_hydrolase_like_6 52.9 7 0.00015 33.7 1.2 46 140-201 57-104 (177)
17 cd01838 Isoamyl_acetate_hydrol 50.6 7.6 0.00016 33.4 1.0 12 44-55 1-12 (199)
18 cd00229 SGNH_hydrolase SGNH_hy 50.3 1.3E+02 0.0028 24.0 8.8 56 138-202 63-118 (187)
19 cd01832 SGNH_hydrolase_like_1 49.6 7.3 0.00016 33.4 0.8 50 140-201 67-116 (185)
20 cd01820 PAF_acetylesterase_lik 48.7 12 0.00026 33.4 2.0 52 140-202 89-140 (214)
21 cd01831 Endoglucanase_E_like E 47.1 9.9 0.00022 32.5 1.2 48 141-197 56-103 (169)
22 PRK10528 multifunctional acyl- 45.6 11 0.00025 33.1 1.4 36 140-184 71-106 (191)
23 cd01833 XynB_like SGNH_hydrola 45.2 8.2 0.00018 32.2 0.4 98 140-269 40-142 (157)
24 cd01827 sialate_O-acetylestera 45.1 11 0.00024 32.4 1.2 12 44-55 2-13 (188)
25 cd01822 Lysophospholipase_L1_l 44.3 11 0.00024 31.9 1.1 46 140-198 64-109 (177)
26 PRK14805 ornithine carbamoyltr 43.6 16 0.00034 35.4 2.1 25 40-66 145-169 (302)
27 PF09949 DUF2183: Uncharacteri 42.7 21 0.00046 28.9 2.4 20 34-53 56-75 (100)
28 cd01839 SGNH_arylesterase_like 37.8 17 0.00037 32.0 1.3 55 140-201 79-136 (208)
29 cd04501 SGNH_hydrolase_like_4 36.4 17 0.00037 31.1 1.0 11 44-54 2-12 (183)
30 cd01836 FeeA_FeeB_like SGNH_hy 36.4 18 0.0004 31.2 1.2 51 140-201 67-117 (191)
31 PF06462 Hyd_WA: Propeller; I 36.0 33 0.00072 21.8 2.1 21 189-209 8-29 (32)
32 cd01830 XynE_like SGNH_hydrola 35.3 20 0.00042 31.7 1.3 55 140-202 74-131 (204)
33 COG0078 ArgF Ornithine carbamo 32.3 32 0.00069 33.5 2.2 21 40-62 151-171 (310)
34 PF00702 Hydrolase: haloacid d 30.4 39 0.00085 29.2 2.4 20 34-53 185-206 (215)
35 PLN02342 ornithine carbamoyltr 29.2 40 0.00087 33.4 2.4 25 40-66 192-216 (348)
36 cd01821 Rhamnogalacturan_acety 28.9 29 0.00063 30.2 1.3 54 139-200 64-117 (198)
37 cd04506 SGNH_hydrolase_YpmR_li 28.5 29 0.00062 30.3 1.1 56 140-198 68-129 (204)
38 cd00885 cinA Competence-damage 27.5 41 0.00089 29.6 2.0 23 285-307 141-163 (170)
39 PRK03670 competence damage-ind 27.4 41 0.00089 31.7 2.0 23 285-307 150-172 (252)
40 PF12026 DUF3513: Domain of un 26.6 3.4 7.4E-05 38.0 -5.2 17 39-55 131-147 (210)
41 cd01828 sialate_O-acetylestera 26.5 3.8E+02 0.0082 22.3 9.3 52 140-202 48-99 (169)
42 PRK04284 ornithine carbamoyltr 26.3 62 0.0013 31.7 3.1 25 40-65 153-177 (332)
43 cd01829 SGNH_hydrolase_peri2 S 26.1 2.3E+02 0.0049 24.4 6.4 18 44-61 1-18 (200)
44 cd01840 SGNH_hydrolase_yrhL_li 25.3 33 0.00071 28.9 0.9 12 45-56 2-13 (150)
45 PRK03515 ornithine carbamoyltr 24.7 65 0.0014 31.7 2.9 25 40-65 154-178 (336)
46 PRK11891 aspartate carbamoyltr 24.3 72 0.0016 32.6 3.2 26 40-65 239-264 (429)
47 PLN02527 aspartate carbamoyltr 23.6 61 0.0013 31.4 2.5 26 40-65 149-174 (306)
48 PRK02102 ornithine carbamoyltr 23.3 62 0.0013 31.8 2.5 26 40-66 153-178 (331)
49 PF01861 DUF43: Protein of unk 23.2 36 0.00079 32.0 0.8 12 40-51 43-54 (243)
50 PRK08192 aspartate carbamoyltr 23.0 60 0.0013 31.9 2.4 26 40-65 157-182 (338)
51 KOG3482 Small nuclear ribonucl 22.6 71 0.0015 24.6 2.1 21 26-46 2-22 (79)
52 TIGR01489 DKMTPPase-SF 2,3-dik 22.4 84 0.0018 26.6 3.0 13 42-54 162-174 (188)
53 PF05028 PARG_cat: Poly (ADP-r 22.2 76 0.0016 31.2 2.9 43 142-199 289-331 (340)
54 cd04502 SGNH_hydrolase_like_7 22.2 42 0.0009 28.4 0.9 50 140-200 50-99 (171)
55 PRK00856 pyrB aspartate carbam 21.9 66 0.0014 31.1 2.4 27 40-66 154-180 (305)
56 COG1578 Uncharacterized conser 21.5 1.2E+02 0.0027 29.1 4.0 37 26-62 135-171 (285)
57 PRK01713 ornithine carbamoyltr 20.8 73 0.0016 31.2 2.4 26 40-66 154-179 (334)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=3e-93 Score=694.21 Aligned_cols=277 Identities=35% Similarity=0.704 Sum_probs=236.2
Q ss_pred cceEeEEEcCcccccCCCCCHHHHHHHhcCCcEEEEeccchhhHHHHHHHhhhccCCCCcceEeecCCcccccCceEEEE
Q 048359 13 FPIIIFSFCGFFATVENRFDPKLMLEKLRNKRLVFAGDSIGRNQWESLLCMLSSVVPNKDSIYEVNGSPITKHKGFLVFK 92 (325)
Q Consensus 13 ~~~~~~~~~~~~~C~LprFd~~~fLe~lRgK~i~FVGDSl~Rnq~~SL~ClL~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 92 (325)
|=-|-|||= +|+||||||.+|||+|||||||||||||+|||||||+|||++++|+..+... +..++++|+
T Consensus 94 Yl~WRWqP~---gC~LPRFda~~fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~-------~~~~~~~~~ 163 (387)
T PLN02629 94 YLKYRWQPL---NCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMS-------RGDPLSTFK 163 (387)
T ss_pred hhhccccCC---CCCCCCcCHHHHHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeee-------cCCceEEEE
Confidence 334788884 5999999999999999999999999999999999999999999887543222 123356999
Q ss_pred EeecceEEEEEecccccccCCCCCCCCCceeeEEEccccCccccCCCCCcEEEEccCcc---------ccccccCceeee
Q 048359 93 FKDYNCTVEYYRAPFLVLQSRPPAGSSEKIKTTLKVDQMDWNSWKWKDADVLVFNTGHW---------GCYFQEGAEVKI 163 (325)
Q Consensus 93 f~~~n~Tv~~~wspfLV~~~~~~~~~~~~~~~~l~lD~~~~~~~~w~~~DVlV~NtGhW---------~~~~~~g~~v~~ 163 (325)
|++||+||+||||||||+.+... ....|+||+++..++.|+++|||||||||| +.+++.|+.+.+
T Consensus 164 F~~yN~TV~~ywspfLV~~~~~~------~~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~ 237 (387)
T PLN02629 164 FLDYGVSISFYKAPYLVDIDAVQ------GKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQ 237 (387)
T ss_pred eccCCEEEEEEecceEEeeecCC------CceeEEecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCcccc
Confidence 99999999999999999975422 246899999996677999999999999999 256778888889
Q ss_pred cccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCCCCCCCCCCC-----CCCCCCccCCCCCCCCCchHHHHHHH
Q 048359 164 EMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHFRGGDWRTGG-----SCHMETLPELGTSLVPPETWVQFKMV 238 (325)
Q Consensus 164 ~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~GG-----~C~~~t~P~~~~~~~~~~~w~~~~~~ 238 (325)
++++.+|||+||+||++||++++++.+++|||||+||+||+||+||+|| +|+++|+|+.+....+... .+++++
T Consensus 238 ~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~-~~~~~v 316 (387)
T PLN02629 238 DMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYP-DQMRVV 316 (387)
T ss_pred CccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccccCcch-HHHHHH
Confidence 9999999999999999999999988899999999999999999999875 5888999997654433333 356678
Q ss_pred HHHHHhcCCCCceEEeeccchhhhhhcCCCCCCCCC--CCCCCCCCCCCCcccccCCCcchHHHHHHHHHHh
Q 048359 239 TDVLLANTSTWKFDVLNVTYMTAQRKDGHSSLYYMG--PKASPAPIHRQDCSHWCLPGVPDSWNELLYALFL 308 (325)
Q Consensus 239 ~~~~~~~~~~~rv~lLDIT~ls~~R~DgHps~y~~~--~~~~~~~~~~~DC~HWCLPGv~D~WNelL~~~L~ 308 (325)
++++++ ++.+|++||||+||++|||||||+|+.. +++++++..++||+||||||||||||||||++|+
T Consensus 317 e~v~~~--~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 317 DEVIRG--MHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred HHHHHh--cCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 888875 4589999999999999999999999643 2334566788999999999999999999999986
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=100.00 E-value=1.5e-53 Score=392.34 Aligned_cols=249 Identities=38% Similarity=0.718 Sum_probs=186.4
Q ss_pred CCCCCHHHHHHHhcCCcEEEEeccchhhHHHHHHHhhhccCCCCcceEeecCCcccccCceEEEEEeecceEEEEEeccc
Q 048359 28 ENRFDPKLMLEKLRNKRLVFAGDSIGRNQWESLLCMLSSVVPNKDSIYEVNGSPITKHKGFLVFKFKDYNCTVEYYRAPF 107 (325)
Q Consensus 28 LprFd~~~fLe~lRgK~i~FVGDSl~Rnq~~SL~ClL~~~~~~~~~~~~~~~~~~~k~~~~~~~~f~~~n~Tv~~~wspf 107 (325)
||+||+.++|++||||+|+|||||++||||+||+|+|.+..+....... ..... +......+.|+++|+||+|+|+||
T Consensus 1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~f~~~p~ 78 (263)
T PF13839_consen 1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPH-SGIEF-PNHRNFRYNFPDYNVTLSFYWDPF 78 (263)
T ss_pred CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccc-ccccc-ccCCceEEeecCCCeEEEEecccc
Confidence 7999999999999999999999999999999999999987762110000 00000 011234788999999999999999
Q ss_pred ccccCCCCCCCCCceeeEEEccccC-ccccCCC----CCcEEEEccCcccc----ccccCceeeecccHHHHHHHHHHHH
Q 048359 108 LVLQSRPPAGSSEKIKTTLKVDQMD-WNSWKWK----DADVLVFNTGHWGC----YFQEGAEVKIEMKVEHAYRRSIETV 178 (325)
Q Consensus 108 LV~~~~~~~~~~~~~~~~l~lD~~~-~~~~~w~----~~DVlV~NtGhW~~----~~~~g~~v~~~~~~~~Ayr~al~t~ 178 (325)
|++. +|.++ .....|. ..||||||+|+|.. ++..+++ .+++..++|+..|+++
T Consensus 79 l~~~----------------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~~~~~~~~~~--~~~~~~~~y~~~l~~~ 140 (263)
T PF13839_consen 79 LVDQ----------------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRRSGFIEWGDN--KEINPLEAYRNRLRTL 140 (263)
T ss_pred cccc----------------ccccchhhhccccccccCCCEEEEEcchhhhhcchhcccCCC--cCcchHHHHHHHHHHH
Confidence 9964 12221 1112343 79999999999932 1112222 4667899999999999
Q ss_pred HHHHHhhcCCCc--ceEEEEeccCCCCCCCCCCCCCCCCCCCccCCCCCCCCCchHHHHHHHHHHHHhcC-CCCceEEee
Q 048359 179 VKWIHNEVNTSK--TQVFFRTFAPVHFRGGDWRTGGSCHMETLPELGTSLVPPETWVQFKMVTDVLLANT-STWKFDVLN 255 (325)
Q Consensus 179 ~~wi~~~~~~~~--~~vf~Rt~SP~Hf~~g~W~~GG~C~~~t~P~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~rv~lLD 255 (325)
++++.+.+++.+ ++||||+++|+||++++|++||+|...+ . ..... .....+++++.+.. ...++++||
T Consensus 141 ~~~~~~~~~~~~~~~~v~~r~~~P~h~~~~~~~~gg~c~~~~----~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~ld 212 (263)
T PF13839_consen 141 ADWVRRLLDRSKPPTRVFWRTTSPVHFEGGDWNSGGSCNPPR----R---EEITN-EQIDELNEALREALKKNSRVHLLD 212 (263)
T ss_pred HHHHHhhhccccccceEEEEecCCccccccccccCCCcCccc----c---cCCCH-HHHHHHHHHHHHHhhcCCCceeee
Confidence 999998876555 9999999999999999999999998211 0 11111 23444445544322 458999999
Q ss_pred c-cchhhhhh-cCCCCCCCCCCCCCCCCCCCCCcccccCCCcchHHHHHHHHHHhc
Q 048359 256 V-TYMTAQRK-DGHSSLYYMGPKASPAPIHRQDCSHWCLPGVPDSWNELLYALFLK 309 (325)
Q Consensus 256 I-T~ls~~R~-DgHps~y~~~~~~~~~~~~~~DC~HWCLPGv~D~WNelL~~~L~~ 309 (325)
| |.++.+|+ |||||+|+.... ....||+|||+|||+|+||+||+++||.
T Consensus 213 i~~~~~~~r~~d~H~~~~~~~~~-----~~~~Dc~Hw~~p~v~d~~~~lL~~~lcn 263 (263)
T PF13839_consen 213 IFTMLSSFRPDDAHPGIYRNQWP-----RQPQDCLHWCLPGVIDTWNELLLNLLCN 263 (263)
T ss_pred ecchhhhccccccCcccccCCCC-----CCCCCCcCcCCCcHHHHHHHHHHHHhhC
Confidence 9 99999999 999999975532 2369999999999999999999999974
No 3
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.08 E-value=1.4e-05 Score=71.24 Aligned_cols=51 Identities=20% Similarity=0.434 Sum_probs=41.3
Q ss_pred cEEEEccCcc-ccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 048359 142 DVLVFNTGHW-GCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPV 201 (325)
Q Consensus 142 DVlV~NtGhW-~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~ 201 (325)
||||||+|.| -++|.+ ...+-|++-|.+...-+.+-+. .+++++|.|++|-
T Consensus 52 DVIi~Ns~LWDl~ry~~--------~~~~~Y~~NL~~Lf~rLk~~lp-~~allIW~tt~Pv 103 (183)
T cd01842 52 DLVIMNSCLWDLSRYQR--------NSMKTYRENLERLFSKLDSVLP-IECLIVWNTAMPV 103 (183)
T ss_pred eEEEEecceecccccCC--------CCHHHHHHHHHHHHHHHHhhCC-CccEEEEecCCCC
Confidence 9999999999 344432 2478899999999988876554 6789999999996
No 4
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=78.38 E-value=19 Score=30.93 Aligned_cols=54 Identities=13% Similarity=0.286 Sum_probs=34.6
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVH 202 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~H 202 (325)
..|+|||+.|.=-. .... ....+.|+..++.+++.+.+.. .+.+|++.|..|..
T Consensus 67 ~pd~Vii~~G~ND~-~~~~------~~~~~~~~~~l~~li~~i~~~~--~~~~iil~t~~p~~ 120 (188)
T cd01827 67 NPNIVIIKLGTNDA-KPQN------WKYKDDFKKDYETMIDSFQALP--SKPKIYICYPIPAY 120 (188)
T ss_pred CCCEEEEEcccCCC-CCCC------CccHHHHHHHHHHHHHHHHHHC--CCCeEEEEeCCccc
Confidence 46999999995310 1100 0124678888888888776532 45678888877754
No 5
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=75.19 E-value=1.4 Score=37.76 Aligned_cols=53 Identities=9% Similarity=0.159 Sum_probs=31.2
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecc
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFA 199 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~S 199 (325)
..|+|||..|.--.....+ .....+.|+..|+.+++.+.+. . +...|++-+..
T Consensus 61 ~~d~v~l~~G~ND~~~~~~-----~~~~~~~~~~~l~~~v~~~~~~-~-~~~~ii~~~p~ 113 (191)
T cd01834 61 KPDVVSIMFGINDSFRGFD-----DPVGLEKFKTNLRRLIDRLKNK-E-SAPRIVLVSPI 113 (191)
T ss_pred CCCEEEEEeecchHhhccc-----ccccHHHHHHHHHHHHHHHHcc-c-CCCcEEEECCc
Confidence 4799999998641100000 0123677888898888888532 2 34566665533
No 6
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=74.89 E-value=15 Score=31.47 Aligned_cols=57 Identities=18% Similarity=0.259 Sum_probs=37.1
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVH 202 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~H 202 (325)
..|+|||..|.--.....+. .-...+.|+..++.+++.+.+.. .+.+|++-|..|..
T Consensus 63 ~pd~vii~~G~ND~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~--~~~~ii~~t~~~~~ 119 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQP----QHVPLDEYKENLRKIVSHLKSLS--PKTKVILITPPPVD 119 (199)
T ss_pred CceEEEEEecCccccCCCCC----CcccHHHHHHHHHHHHHHHHhhC--CCCeEEEeCCCCCC
Confidence 68999999996521111110 00125788888999888886532 46678888887744
No 7
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=66.22 E-value=32 Score=29.10 Aligned_cols=53 Identities=11% Similarity=0.197 Sum_probs=34.8
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHF 203 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf 203 (325)
..|+||+..|-=-. .. + .-.+.|+..++++++.+.+.. ++.+|++-+..|...
T Consensus 51 ~pd~v~i~~G~ND~-~~-~-------~~~~~~~~~~~~l~~~~~~~~--p~~~vi~~~~~p~~~ 103 (174)
T cd01841 51 NPSKVFLFLGTNDI-GK-E-------VSSNQFIKWYRDIIEQIREEF--PNTKIYLLSVLPVLE 103 (174)
T ss_pred CCCEEEEEeccccC-CC-C-------CCHHHHHHHHHHHHHHHHHHC--CCCEEEEEeeCCcCc
Confidence 56999988884311 01 1 125668888888888776542 467899999888654
No 8
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=66.19 E-value=4.3 Score=35.42 Aligned_cols=59 Identities=17% Similarity=0.251 Sum_probs=36.1
Q ss_pred CCcEEEEccCccccc-cccCceeee--cccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 048359 140 DADVLVFNTGHWGCY-FQEGAEVKI--EMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVH 202 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~-~~~g~~v~~--~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~H 202 (325)
..|+||++.|.+-.. ...++.... ...+.+.|+..|+.+++.+.+ .+.+|++-+..|.+
T Consensus 59 ~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~----~~~~vili~~pp~~ 120 (200)
T cd01829 59 KPDVVVVFLGANDRQDIRDGDGYLKFGSPEWEEEYRQRIDELLNVARA----KGVPVIWVGLPAMR 120 (200)
T ss_pred CCCEEEEEecCCCCccccCCCceeecCChhHHHHHHHHHHHHHHHHHh----CCCcEEEEcCCCCC
Confidence 579999999987211 111111100 112457888888888877653 35578888777754
No 9
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=65.79 E-value=3 Score=35.60 Aligned_cols=12 Identities=50% Similarity=0.761 Sum_probs=11.1
Q ss_pred CcEEEEeccchh
Q 048359 43 KRLVFAGDSIGR 54 (325)
Q Consensus 43 K~i~FVGDSl~R 54 (325)
|+|+|+|||++.
T Consensus 1 ~~iv~~GdS~t~ 12 (174)
T cd01841 1 KNIVFIGDSLFE 12 (174)
T ss_pred CCEEEEcchhhh
Confidence 789999999997
No 10
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.72 E-value=33 Score=33.75 Aligned_cols=26 Identities=23% Similarity=0.296 Sum_probs=22.5
Q ss_pred cCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 41 RNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 41 RgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
-++++.||||||++..-+-|.--|.+
T Consensus 115 ~a~kvLvvGDslm~gla~gl~~al~t 140 (354)
T COG2845 115 DADKVLVVGDSLMQGLAEGLDKALAT 140 (354)
T ss_pred CCCEEEEechHHhhhhHHHHHHHhcc
Confidence 57889999999999999888887764
No 11
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=63.60 E-value=4.9 Score=34.95 Aligned_cols=25 Identities=20% Similarity=0.363 Sum_probs=21.5
Q ss_pred cCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 41 RNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 41 RgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
.|++|+|||| ..-|...||+.+|+.
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~ 25 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAK 25 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHH
Confidence 4899999999 656799999999884
No 12
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=60.36 E-value=55 Score=26.72 Aligned_cols=56 Identities=14% Similarity=0.251 Sum_probs=33.3
Q ss_pred CCCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCCC
Q 048359 139 KDADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHFR 204 (325)
Q Consensus 139 ~~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf~ 204 (325)
...|+|||+.|.= +... +.. .....+.|+..|+.+++.+.. .+.|++-+..|....
T Consensus 60 ~~~d~vvi~~G~N-D~~~-~~~---~~~~~~~~~~~l~~~i~~~~~-----~~~vi~~~~~~~~~~ 115 (179)
T PF13472_consen 60 PKPDLVVISFGTN-DVLN-GDE---NDTSPEQYEQNLRRIIEQLRP-----HGPVILVSPPPRGPD 115 (179)
T ss_dssp TTCSEEEEE--HH-HHCT-CTT---CHHHHHHHHHHHHHHHHHHHT-----TSEEEEEE-SCSSSS
T ss_pred CCCCEEEEEcccc-cccc-ccc---ccccHHHHHHHHHHHHHhhcc-----cCcEEEecCCCcccc
Confidence 4689999999942 1111 110 113466788888888877742 238888888887764
No 13
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=55.81 E-value=80 Score=26.87 Aligned_cols=48 Identities=13% Similarity=0.196 Sum_probs=32.0
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAP 200 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP 200 (325)
..|+||++.|.--... + ...+.|.+.++.+++.+.+ ...++++.+..|
T Consensus 59 ~~d~v~i~~G~ND~~~--~-------~~~~~~~~~~~~li~~~~~----~~~~~il~~~~p 106 (183)
T cd04501 59 KPAVVIIMGGTNDIIV--N-------TSLEMIKDNIRSMVELAEA----NGIKVILASPLP 106 (183)
T ss_pred CCCEEEEEeccCcccc--C-------CCHHHHHHHHHHHHHHHHH----CCCcEEEEeCCC
Confidence 5799999999762111 1 1256688888888887754 345677777666
No 14
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=54.24 E-value=5.8 Score=34.04 Aligned_cols=130 Identities=15% Similarity=0.190 Sum_probs=67.0
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCCCCCCCCCCCCCCCCCc
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHFRGGDWRTGGSCHMETL 219 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~GG~C~~~t~ 219 (325)
..|+|||..|.= +....+ .-.+.|+..|+.+++.+.+.. .+.+|++.+..|.-+..+ .|....
T Consensus 56 ~pd~Vii~~G~N-D~~~~~-------~~~~~~~~~~~~li~~i~~~~--~~~~iv~~~~~~~~~~~~------~~~~~~- 118 (189)
T cd01825 56 PPDLVILSYGTN-EAFNKQ-------LNASEYRQQLREFIKRLRQIL--PNASILLVGPPDSLQKTG------AGRWRT- 118 (189)
T ss_pred CCCEEEEECCCc-ccccCC-------CCHHHHHHHHHHHHHHHHHHC--CCCeEEEEcCCchhccCC------CCCccc-
Confidence 469999998831 000000 125678899999988886542 467899988776533210 011100
Q ss_pred cCCCCCCCCCchH-HHHHHHHHHHHhcCCCCceEEeeccchhhhhhcCCCCCCCCCCCCCCCCCCCCCcccccCCCcchH
Q 048359 220 PELGTSLVPPETW-VQFKMVTDVLLANTSTWKFDVLNVTYMTAQRKDGHSSLYYMGPKASPAPIHRQDCSHWCLPGVPDS 298 (325)
Q Consensus 220 P~~~~~~~~~~~w-~~~~~~~~~~~~~~~~~rv~lLDIT~ls~~R~DgHps~y~~~~~~~~~~~~~~DC~HWCLPGv~D~ 298 (325)
.... ...+.++++.++ ..+.++|+...+.-. .+|..... ......|-+|.=--| -..
T Consensus 119 ---------~~~~~~~~~~~~~~a~~----~~v~~vd~~~~~~~~-~~~~~~~~-------~~~~~~Dg~Hp~~~G-~~~ 176 (189)
T cd01825 119 ---------PPGLDAVIAAQRRVAKE----EGIAFWDLYAAMGGE-GGIWQWAE-------PGLARKDYVHLTPRG-YER 176 (189)
T ss_pred ---------CCcHHHHHHHHHHHHHH----cCCeEEeHHHHhCCc-chhhHhhc-------ccccCCCcccCCcch-HHH
Confidence 0001 122333344332 459999998775433 23321110 011236888854332 355
Q ss_pred HHHHHHHHHh
Q 048359 299 WNELLYALFL 308 (325)
Q Consensus 299 WNelL~~~L~ 308 (325)
|-+.++..|.
T Consensus 177 ~a~~i~~~i~ 186 (189)
T cd01825 177 LANLLYEALL 186 (189)
T ss_pred HHHHHHHHHH
Confidence 6666665554
No 15
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=53.28 E-value=6.5 Score=34.18 Aligned_cols=54 Identities=11% Similarity=0.056 Sum_probs=30.8
Q ss_pred CCCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccC
Q 048359 139 KDADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAP 200 (325)
Q Consensus 139 ~~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP 200 (325)
...|+|||..|.=-.....+. .. ....+.|+..++.+++.+.+ +..|++-+..|
T Consensus 68 ~~pd~V~i~~G~ND~~~~~~~--~~-~~~~~~~~~~~~~ii~~~~~-----~~~vi~~~~~p 121 (193)
T cd01835 68 NVPNRLVLSVGLNDTARGGRK--RP-QLSARAFLFGLNQLLEEAKR-----LVPVLVVGPTP 121 (193)
T ss_pred CCCCEEEEEecCcccccccCc--cc-ccCHHHHHHHHHHHHHHHhc-----CCcEEEEeCCC
Confidence 367999999995311111110 00 12356788888888765542 34577776655
No 16
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=52.95 E-value=7 Score=33.71 Aligned_cols=46 Identities=20% Similarity=0.295 Sum_probs=30.5
Q ss_pred CCcEEEEccCc--cccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 048359 140 DADVLVFNTGH--WGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPV 201 (325)
Q Consensus 140 ~~DVlV~NtGh--W~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~ 201 (325)
..|+||+..|. +. ....|+..++.+++.|.+.. +++.|++-+..|.
T Consensus 57 ~pd~vii~~G~ND~~--------------~~~~~~~~~~~~i~~i~~~~--p~~~iil~~~~~~ 104 (177)
T cd01844 57 PADLYIIDCGPNIVG--------------AEAMVRERLGPLVKGLRETH--PDTPILLVSPRYC 104 (177)
T ss_pred CCCEEEEEeccCCCc--------------cHHHHHHHHHHHHHHHHHHC--cCCCEEEEecCCC
Confidence 47999998773 21 01167888888888886642 3567888776654
No 17
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=50.57 E-value=7.6 Score=33.36 Aligned_cols=12 Identities=42% Similarity=0.650 Sum_probs=10.8
Q ss_pred cEEEEeccchhh
Q 048359 44 RLVFAGDSIGRN 55 (325)
Q Consensus 44 ~i~FVGDSl~Rn 55 (325)
||+|+|||++..
T Consensus 1 ~i~~~GDSit~g 12 (199)
T cd01838 1 KIVLFGDSITQF 12 (199)
T ss_pred CEEEecCccccc
Confidence 699999999985
No 18
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=50.25 E-value=1.3e+02 Score=24.03 Aligned_cols=56 Identities=11% Similarity=0.152 Sum_probs=33.3
Q ss_pred CCCCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 048359 138 WKDADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVH 202 (325)
Q Consensus 138 w~~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~H 202 (325)
....|+||+..|..-..... ......+...++..++.+.+. ....+|++=+..|-.
T Consensus 63 ~~~~d~vil~~G~ND~~~~~-------~~~~~~~~~~~~~~i~~~~~~--~~~~~vv~~~~~~~~ 118 (187)
T cd00229 63 KDKPDLVIIELGTNDLGRGG-------DTSIDEFKANLEELLDALRER--APGAKVILITPPPPP 118 (187)
T ss_pred cCCCCEEEEEeccccccccc-------ccCHHHHHHHHHHHHHHHHHH--CCCCcEEEEeCCCCC
Confidence 34689999999977211100 123456666777777766542 245667776666644
No 19
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=49.60 E-value=7.3 Score=33.41 Aligned_cols=50 Identities=16% Similarity=0.234 Sum_probs=31.5
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPV 201 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~ 201 (325)
..|+|||..|-=-. .. + ....+.|+..++.+++.+.+ +...|++-+..|.
T Consensus 67 ~~d~vii~~G~ND~-~~-~------~~~~~~~~~~~~~~i~~i~~----~~~~vil~~~~~~ 116 (185)
T cd01832 67 RPDLVTLLAGGNDI-LR-P------GTDPDTYRADLEEAVRRLRA----AGARVVVFTIPDP 116 (185)
T ss_pred CCCEEEEecccccc-cc-C------CCCHHHHHHHHHHHHHHHHh----CCCEEEEecCCCc
Confidence 67999998883200 00 0 12356688888888887762 3556888776554
No 20
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=48.66 E-value=12 Score=33.43 Aligned_cols=52 Identities=13% Similarity=0.198 Sum_probs=31.7
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVH 202 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~H 202 (325)
..|+|||..|.= +.. .+. ..+.|...++.+++.+.+.. +...|++-+..|..
T Consensus 89 ~pd~VvI~~G~N-D~~-~~~-------~~~~~~~~l~~ii~~l~~~~--P~~~Iil~~~~p~~ 140 (214)
T cd01820 89 NPKVVVLLIGTN-NIG-HTT-------TAEEIAEGILAIVEEIREKL--PNAKILLLGLLPRG 140 (214)
T ss_pred CCCEEEEEeccc-ccC-CCC-------CHHHHHHHHHHHHHHHHHHC--CCCeEEEEeccCCC
Confidence 479999998842 000 010 24556777777777765432 35678888877753
No 21
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=47.07 E-value=9.9 Score=32.47 Aligned_cols=48 Identities=10% Similarity=0.203 Sum_probs=27.5
Q ss_pred CcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEe
Q 048359 141 ADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRT 197 (325)
Q Consensus 141 ~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt 197 (325)
.|+|||+.|.= +... +. ......|+..++.+++-+.+.. ++.++++-+
T Consensus 56 pd~vii~~G~N-D~~~-~~-----~~~~~~~~~~~~~li~~i~~~~--p~~~i~~~~ 103 (169)
T cd01831 56 PDLVVINLGTN-DFST-GN-----NPPGEDFTNAYVEFIEELRKRY--PDAPIVLML 103 (169)
T ss_pred CCEEEEECCcC-CCCC-CC-----CCCHHHHHHHHHHHHHHHHHHC--CCCeEEEEe
Confidence 79999999942 0010 00 0124567777777777776532 345566644
No 22
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=45.60 E-value=11 Score=33.10 Aligned_cols=36 Identities=6% Similarity=0.153 Sum_probs=22.8
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHh
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHN 184 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~ 184 (325)
..|+||+..|.=-. . .+ -..+.|...++.+++.+.+
T Consensus 71 ~pd~Vii~~GtND~-~-~~-------~~~~~~~~~l~~li~~~~~ 106 (191)
T PRK10528 71 QPRWVLVELGGNDG-L-RG-------FPPQQTEQTLRQIIQDVKA 106 (191)
T ss_pred CCCEEEEEeccCcC-c-cC-------CCHHHHHHHHHHHHHHHHH
Confidence 56999999885311 0 11 1246678888888877754
No 23
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=45.20 E-value=8.2 Score=32.25 Aligned_cols=98 Identities=10% Similarity=0.118 Sum_probs=54.0
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCCCCCCCCCCCCCCCCCc
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHFRGGDWRTGGSCHMETL 219 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~GG~C~~~t~ 219 (325)
..|+||++.|.=-. .. + .-.+.|+..++++++.+.+. .++.++++-+..|.-.. .. +
T Consensus 40 ~pd~vvi~~G~ND~-~~-~-------~~~~~~~~~~~~~i~~i~~~--~p~~~ii~~~~~p~~~~--------~~-~--- 96 (157)
T cd01833 40 KPDVVLLHLGTNDL-VL-N-------RDPDTAPDRLRALIDQMRAA--NPDVKIIVATLIPTTDA--------SG-N--- 96 (157)
T ss_pred CCCEEEEeccCccc-cc-C-------CCHHHHHHHHHHHHHHHHHh--CCCeEEEEEeCCCCCCc--------ch-h---
Confidence 57999999884210 00 1 12467888888888887654 24567887776663221 00 0
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHhcC-CCCceEEeeccchhh---hhhcC-CCC
Q 048359 220 PELGTSLVPPETWVQFKMVTDVLLANT-STWKFDVLNVTYMTA---QRKDG-HSS 269 (325)
Q Consensus 220 P~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~rv~lLDIT~ls~---~R~Dg-Hps 269 (325)
+ ..-..++.+.++.++.+ .+..+.++|+..... +.+|| ||+
T Consensus 97 ~---------~~~~~n~~l~~~~~~~~~~~~~v~~vd~~~~~~~~~~~~Dg~Hpn 142 (157)
T cd01833 97 A---------RIAEYNAAIPGVVADLRTAGSPVVLVDMSTGYTTADDLYDGLHPN 142 (157)
T ss_pred H---------HHHHHHHHHHHHHHHHhcCCCCEEEEecCCCCCCcccccCCCCCc
Confidence 0 00023344444444321 135799999988763 44544 444
No 24
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=45.07 E-value=11 Score=32.44 Aligned_cols=12 Identities=25% Similarity=0.517 Sum_probs=10.2
Q ss_pred cEEEEeccchhh
Q 048359 44 RLVFAGDSIGRN 55 (325)
Q Consensus 44 ~i~FVGDSl~Rn 55 (325)
||+|+|||++..
T Consensus 2 ~i~~~GDSit~G 13 (188)
T cd01827 2 KVACVGNSITEG 13 (188)
T ss_pred eEEEEecccccc
Confidence 699999999664
No 25
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=44.26 E-value=11 Score=31.86 Aligned_cols=46 Identities=11% Similarity=0.239 Sum_probs=29.7
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEec
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTF 198 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~ 198 (325)
..|+|||..|.--. . .+ ...+.|+..++.+++.+.+. ..+|++-++
T Consensus 64 ~pd~v~i~~G~ND~-~-~~-------~~~~~~~~~l~~li~~~~~~----~~~vil~~~ 109 (177)
T cd01822 64 KPDLVILELGGNDG-L-RG-------IPPDQTRANLRQMIETAQAR----GAPVLLVGM 109 (177)
T ss_pred CCCEEEEeccCccc-c-cC-------CCHHHHHHHHHHHHHHHHHC----CCeEEEEec
Confidence 57999999996511 0 11 12456888888888777643 456777665
No 26
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=43.55 E-value=16 Score=35.35 Aligned_cols=25 Identities=24% Similarity=0.361 Sum_probs=21.1
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|+||||. .|...|++.++..
T Consensus 145 l~g~kva~vGD~--~~v~~S~~~~~~~ 169 (302)
T PRK14805 145 VSKVKLAYVGDG--NNVTHSLMYGAAI 169 (302)
T ss_pred cCCcEEEEEcCC--CccHHHHHHHHHH
Confidence 588999999994 5788999998863
No 27
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=42.74 E-value=21 Score=28.91 Aligned_cols=20 Identities=20% Similarity=0.469 Sum_probs=16.2
Q ss_pred HHHHHHhcCCcEEEEeccch
Q 048359 34 KLMLEKLRNKRLVFAGDSIG 53 (325)
Q Consensus 34 ~~fLe~lRgK~i~FVGDSl~ 53 (325)
+++++..-+++.++||||=.
T Consensus 56 ~~i~~~fP~~kfiLIGDsgq 75 (100)
T PF09949_consen 56 ERILRDFPERKFILIGDSGQ 75 (100)
T ss_pred HHHHHHCCCCcEEEEeeCCC
Confidence 45677779999999999943
No 28
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.79 E-value=17 Score=32.00 Aligned_cols=55 Identities=9% Similarity=0.092 Sum_probs=32.7
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcC---CCcceEEEEeccCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVN---TSKTQVFFRTFAPV 201 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~---~~~~~vf~Rt~SP~ 201 (325)
..|+|||..|.=-.....+ .-.+.|+..++++++-+.+... .+.++|++-+..|-
T Consensus 79 ~pd~vii~lGtND~~~~~~-------~~~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~ 136 (208)
T cd01839 79 PLDLVIIMLGTNDLKSYFN-------LSAAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPI 136 (208)
T ss_pred CCCEEEEeccccccccccC-------CCHHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCcc
Confidence 5799999988410000000 1246788888888887765421 14566777766554
No 29
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=36.41 E-value=17 Score=31.13 Aligned_cols=11 Identities=55% Similarity=0.682 Sum_probs=10.0
Q ss_pred cEEEEeccchh
Q 048359 44 RLVFAGDSIGR 54 (325)
Q Consensus 44 ~i~FVGDSl~R 54 (325)
||+|+||||+.
T Consensus 2 ~i~~~GDSi~~ 12 (183)
T cd04501 2 RVVCLGDSITY 12 (183)
T ss_pred eEEEEcccccc
Confidence 69999999986
No 30
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.36 E-value=18 Score=31.16 Aligned_cols=51 Identities=16% Similarity=0.207 Sum_probs=33.0
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPV 201 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~ 201 (325)
..|+|||+.|-= +... + ...+.|+..++.+++.+.+.. ...+||+-+..|-
T Consensus 67 ~pd~Vii~~G~N-D~~~-~-------~~~~~~~~~l~~li~~i~~~~--~~~~iiv~~~p~~ 117 (191)
T cd01836 67 RFDVAVISIGVN-DVTH-L-------TSIARWRKQLAELVDALRAKF--PGARVVVTAVPPL 117 (191)
T ss_pred CCCEEEEEeccc-CcCC-C-------CCHHHHHHHHHHHHHHHHhhC--CCCEEEEECCCCc
Confidence 579999998842 1000 1 124668888888888776532 4567888877654
No 31
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=36.05 E-value=33 Score=21.84 Aligned_cols=21 Identities=38% Similarity=0.819 Sum_probs=17.8
Q ss_pred CcceEEEEe-ccCCCCCCCCCC
Q 048359 189 SKTQVFFRT-FAPVHFRGGDWR 209 (325)
Q Consensus 189 ~~~~vf~Rt-~SP~Hf~~g~W~ 209 (325)
..+.+++|+ ++|...+|-.|.
T Consensus 8 ~~G~v~~R~Gis~~~P~G~~W~ 29 (32)
T PF06462_consen 8 SDGSVYFRTGISPSNPEGTSWE 29 (32)
T ss_pred CCCCEEEECcCCCCCCCCCCcE
Confidence 567899998 999999888884
No 32
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=35.35 E-value=20 Score=31.70 Aligned_cols=55 Identities=9% Similarity=0.061 Sum_probs=34.2
Q ss_pred CCcEEEEccCc---cccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 048359 140 DADVLVFNTGH---WGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVH 202 (325)
Q Consensus 140 ~~DVlV~NtGh---W~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~H 202 (325)
..|+|||..|- +......+ ......+.|+..|+++++.+.+. ..+|++-|..|-.
T Consensus 74 ~p~~vii~~G~ND~~~~~~~~~----~~~~~~~~~~~~l~~ii~~~~~~----~~~vil~t~~P~~ 131 (204)
T cd01830 74 GVRTVIILEGVNDIGASGTDFA----AAPVTAEELIAGYRQLIRRAHAR----GIKVIGATITPFE 131 (204)
T ss_pred CCCEEEEecccccccccccccc----cCCCCHHHHHHHHHHHHHHHHHC----CCeEEEecCCCCC
Confidence 57899998883 31111100 01123567888888888877643 4578888888843
No 33
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=32.34 E-value=32 Score=33.55 Aligned_cols=21 Identities=38% Similarity=0.593 Sum_probs=18.1
Q ss_pred hcCCcEEEEeccchhhHHHHHHH
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLC 62 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~C 62 (325)
++|++++||||- -|+-.||+=
T Consensus 151 l~g~k~a~vGDg--NNv~nSl~~ 171 (310)
T COG0078 151 LKGLKLAYVGDG--NNVANSLLL 171 (310)
T ss_pred ccCcEEEEEcCc--chHHHHHHH
Confidence 589999999999 788888764
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=30.43 E-value=39 Score=29.21 Aligned_cols=20 Identities=15% Similarity=0.436 Sum_probs=15.5
Q ss_pred HHHHHHhc--CCcEEEEeccch
Q 048359 34 KLMLEKLR--NKRLVFAGDSIG 53 (325)
Q Consensus 34 ~~fLe~lR--gK~i~FVGDSl~ 53 (325)
.++++.|+ ++++++|||+++
T Consensus 185 ~~~i~~l~~~~~~v~~vGDg~n 206 (215)
T PF00702_consen 185 LRIIKELQVKPGEVAMVGDGVN 206 (215)
T ss_dssp HHHHHHHTCTGGGEEEEESSGG
T ss_pred HHHHHHHhcCCCEEEEEccCHH
Confidence 46677775 668999999993
No 35
>PLN02342 ornithine carbamoyltransferase
Probab=29.18 E-value=40 Score=33.36 Aligned_cols=25 Identities=28% Similarity=0.473 Sum_probs=21.1
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|+||||- .|-..||+.++..
T Consensus 192 l~glkva~vGD~--~nva~Sli~~~~~ 216 (348)
T PLN02342 192 LEGTKVVYVGDG--NNIVHSWLLLAAV 216 (348)
T ss_pred cCCCEEEEECCC--chhHHHHHHHHHH
Confidence 589999999994 3699999998873
No 36
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=28.86 E-value=29 Score=30.25 Aligned_cols=54 Identities=11% Similarity=0.091 Sum_probs=32.8
Q ss_pred CCCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccC
Q 048359 139 KDADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAP 200 (325)
Q Consensus 139 ~~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP 200 (325)
...|+||+..|.--....... .....+.|+..|+++++.+.+. +..+++-|..|
T Consensus 64 ~~pdlVii~~G~ND~~~~~~~----~~~~~~~~~~nl~~ii~~~~~~----~~~~il~tp~~ 117 (198)
T cd01821 64 KPGDYVLIQFGHNDQKPKDPE----YTEPYTTYKEYLRRYIAEARAK----GATPILVTPVT 117 (198)
T ss_pred CCCCEEEEECCCCCCCCCCCC----CCCcHHHHHHHHHHHHHHHHHC----CCeEEEECCcc
Confidence 368999999997511111000 0012577999999998877642 44567755444
No 37
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=28.51 E-value=29 Score=30.34 Aligned_cols=56 Identities=20% Similarity=0.252 Sum_probs=31.5
Q ss_pred CCcEEEEccCc---cc---cccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEec
Q 048359 140 DADVLVFNTGH---WG---CYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTF 198 (325)
Q Consensus 140 ~~DVlV~NtGh---W~---~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~ 198 (325)
..|+||+..|- +. ..+.++.. ..-....+.|++.|+.+++.+.+.. .+.+|++-++
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~i~~ir~~~--p~~~Ivv~~~ 129 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNFLSLDV-EDFKKAEETYQNNLKKIFKEIRKLN--PDAPIFLVGL 129 (204)
T ss_pred cCCEEEEEecchhHHHHHHhccccchH-HHHHHHHHHHHHHHHHHHHHHHHHC--CCCeEEEEec
Confidence 67999999883 21 11111000 0001135679999999998886532 3456666654
No 38
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=27.50 E-value=41 Score=29.58 Aligned_cols=23 Identities=26% Similarity=0.430 Sum_probs=19.2
Q ss_pred CCcccccCCCcchHHHHHHHHHH
Q 048359 285 QDCSHWCLPGVPDSWNELLYALF 307 (325)
Q Consensus 285 ~DC~HWCLPGv~D~WNelL~~~L 307 (325)
++|..+||||||..-..+|-+.+
T Consensus 141 ~~~~i~~lPG~P~e~~~m~~~~~ 163 (170)
T cd00885 141 NGKNVFLLPGVPSEMKPMLEEEV 163 (170)
T ss_pred CCeEEEEECCChHHHHHHHHHHH
Confidence 46899999999998888887544
No 39
>PRK03670 competence damage-inducible protein A; Provisional
Probab=27.38 E-value=41 Score=31.70 Aligned_cols=23 Identities=22% Similarity=0.446 Sum_probs=19.6
Q ss_pred CCcccccCCCcchHHHHHHHHHH
Q 048359 285 QDCSHWCLPGVPDSWNELLYALF 307 (325)
Q Consensus 285 ~DC~HWCLPGv~D~WNelL~~~L 307 (325)
+.|.++||||||-.+..||-..+
T Consensus 150 ~~~~v~~lPGvP~e~~~M~~~~v 172 (252)
T PRK03670 150 KGTKIFVLPGMPREMKAMLEKEV 172 (252)
T ss_pred CCeEEEEeCCChHHHHHHHHHHH
Confidence 45899999999999999987744
No 40
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=26.59 E-value=3.4 Score=38.01 Aligned_cols=17 Identities=41% Similarity=0.735 Sum_probs=14.4
Q ss_pred HhcCCcEEEEeccchhh
Q 048359 39 KLRNKRLVFAGDSIGRN 55 (325)
Q Consensus 39 ~lRgK~i~FVGDSl~Rn 55 (325)
.|-|.+++||||+|.|+
T Consensus 131 Il~ahkLVfiGDTl~r~ 147 (210)
T PF12026_consen 131 ILSAHKLVFIGDTLCRE 147 (210)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred EEEeeeeeeeccHHHHH
Confidence 36788899999999985
No 41
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=26.51 E-value=3.8e+02 Score=22.30 Aligned_cols=52 Identities=10% Similarity=0.243 Sum_probs=35.2
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVH 202 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~H 202 (325)
..|+||+..|.=-. ..+. -.+.|++.++.+++.+.+.. ++.+|++-+..|..
T Consensus 48 ~pd~vvl~~G~ND~--~~~~-------~~~~~~~~l~~li~~~~~~~--~~~~vi~~~~~p~~ 99 (169)
T cd01828 48 QPKAIFIMIGINDL--AQGT-------SDEDIVANYRTILEKLRKHF--PNIKIVVQSILPVG 99 (169)
T ss_pred CCCEEEEEeeccCC--CCCC-------CHHHHHHHHHHHHHHHHHHC--CCCeEEEEecCCcC
Confidence 46999999884211 0111 24778888888888776542 46789999988865
No 42
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=26.31 E-value=62 Score=31.73 Aligned_cols=25 Identities=16% Similarity=0.320 Sum_probs=20.7
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhh
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLS 65 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~ 65 (325)
+.|++|+||||-.+ |...|++=+|+
T Consensus 153 l~g~kia~vGD~~~-~v~~Sl~~~~~ 177 (332)
T PRK04284 153 YKDIKFTYVGDGRN-NVANALMQGAA 177 (332)
T ss_pred cCCcEEEEecCCCc-chHHHHHHHHH
Confidence 57899999999755 58889888776
No 43
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=26.11 E-value=2.3e+02 Score=24.36 Aligned_cols=18 Identities=33% Similarity=0.538 Sum_probs=14.9
Q ss_pred cEEEEeccchhhHHHHHH
Q 048359 44 RLVFAGDSIGRNQWESLL 61 (325)
Q Consensus 44 ~i~FVGDSl~Rnq~~SL~ 61 (325)
||+|+|||++...+-+|.
T Consensus 1 ril~iGDS~~~g~~~~l~ 18 (200)
T cd01829 1 RVLVIGDSLAQGLAPGLL 18 (200)
T ss_pred CEEEEechHHHHHHHHHH
Confidence 689999999998766654
No 44
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=25.30 E-value=33 Score=28.86 Aligned_cols=12 Identities=25% Similarity=0.362 Sum_probs=9.9
Q ss_pred EEEEeccchhhH
Q 048359 45 LVFAGDSIGRNQ 56 (325)
Q Consensus 45 i~FVGDSl~Rnq 56 (325)
|.|+||||+-.-
T Consensus 2 v~~~GDSv~~~~ 13 (150)
T cd01840 2 ITAIGDSVMLDS 13 (150)
T ss_pred eeEEeehHHHch
Confidence 689999998763
No 45
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=24.69 E-value=65 Score=31.68 Aligned_cols=25 Identities=32% Similarity=0.414 Sum_probs=19.8
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhh
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLS 65 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~ 65 (325)
+.|++|+||||- ..|...||+=+++
T Consensus 154 l~g~~ia~vGD~-~~~v~~Sl~~~~~ 178 (336)
T PRK03515 154 FNEMTLAYAGDA-RNNMGNSLLEAAA 178 (336)
T ss_pred cCCCEEEEeCCC-cCcHHHHHHHHHH
Confidence 568899999994 3368889888776
No 46
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=24.29 E-value=72 Score=32.56 Aligned_cols=26 Identities=19% Similarity=0.263 Sum_probs=21.6
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhh
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLS 65 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~ 65 (325)
+.|++|+||||-..-|...||+-+|.
T Consensus 239 l~G~kIa~vGD~~~~rv~~Sl~~~la 264 (429)
T PRK11891 239 VDGAHIALVGDLKYGRTVHSLVKLLA 264 (429)
T ss_pred cCCCEEEEECcCCCChHHHHHHHHHH
Confidence 56899999999765578999988875
No 47
>PLN02527 aspartate carbamoyltransferase
Probab=23.56 E-value=61 Score=31.38 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=21.3
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhh
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLS 65 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~ 65 (325)
+.|++|+||||-.+-|.+.||+=+|.
T Consensus 149 l~g~kva~vGD~~~~rv~~Sl~~~~~ 174 (306)
T PLN02527 149 LDGIKVGLVGDLANGRTVRSLAYLLA 174 (306)
T ss_pred cCCCEEEEECCCCCChhHHHHHHHHH
Confidence 68899999999865468889887765
No 48
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=23.30 E-value=62 Score=31.80 Aligned_cols=26 Identities=27% Similarity=0.374 Sum_probs=21.4
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|+||||.-+ |-..||+-+++.
T Consensus 153 l~g~~va~vGd~~~-~v~~Sl~~~~~~ 178 (331)
T PRK02102 153 LKGLKLAYVGDGRN-NMANSLMVGGAK 178 (331)
T ss_pred CCCCEEEEECCCcc-cHHHHHHHHHHH
Confidence 57899999999754 588899988763
No 49
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=23.25 E-value=36 Score=32.04 Aligned_cols=12 Identities=50% Similarity=0.969 Sum_probs=9.0
Q ss_pred hcCCcEEEEecc
Q 048359 40 LRNKRLVFAGDS 51 (325)
Q Consensus 40 lRgK~i~FVGDS 51 (325)
|+||+|.||||-
T Consensus 43 L~gk~il~lGDD 54 (243)
T PF01861_consen 43 LEGKRILFLGDD 54 (243)
T ss_dssp STT-EEEEES-T
T ss_pred ccCCEEEEEcCC
Confidence 689999999995
No 50
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=23.01 E-value=60 Score=31.93 Aligned_cols=26 Identities=19% Similarity=0.188 Sum_probs=21.3
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhh
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLS 65 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~ 65 (325)
+.|++|+||||-..-|..-||+-+|.
T Consensus 157 l~g~kia~vGD~~~~rv~~Sl~~~l~ 182 (338)
T PRK08192 157 IDGMHIAMVGDLKFGRTVHSLSRLLC 182 (338)
T ss_pred cCCCEEEEECcCCCCchHHHHHHHHH
Confidence 67899999999754578899887775
No 51
>KOG3482 consensus Small nuclear ribonucleoprotein (snRNP) SMF [RNA processing and modification]
Probab=22.62 E-value=71 Score=24.60 Aligned_cols=21 Identities=24% Similarity=0.460 Sum_probs=16.6
Q ss_pred ccCCCCCHHHHHHHhcCCcEE
Q 048359 26 TVENRFDPKLMLEKLRNKRLV 46 (325)
Q Consensus 26 C~LprFd~~~fLe~lRgK~i~ 46 (325)
|+.-+-||.-||..|.||++.
T Consensus 2 ~a~~PvNPKpFL~~l~gk~V~ 22 (79)
T KOG3482|consen 2 SAKQPVNPKPFLNGLTGKPVL 22 (79)
T ss_pred CCcccCCchHHHhhccCCeEE
Confidence 444456999999999999764
No 52
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=22.45 E-value=84 Score=26.61 Aligned_cols=13 Identities=15% Similarity=0.624 Sum_probs=11.1
Q ss_pred CCcEEEEeccchh
Q 048359 42 NKRLVFAGDSIGR 54 (325)
Q Consensus 42 gK~i~FVGDSl~R 54 (325)
.++++|||||.+=
T Consensus 162 ~~~~i~iGD~~~D 174 (188)
T TIGR01489 162 YQHIIYIGDGVTD 174 (188)
T ss_pred CceEEEECCCcch
Confidence 5679999999875
No 53
>PF05028 PARG_cat: Poly (ADP-ribose) glycohydrolase (PARG); InterPro: IPR007724 Poly(ADP-ribose) glycohydrolase (PARG) is a ubiquitously expressed exo- and endoglycohydrolase which mediates oxidative and excitotoxic neuronal death [].; GO: 0004649 poly(ADP-ribose) glycohydrolase activity, 0005975 carbohydrate metabolic process; PDB: 4FC2_D 3UEL_C 3UEK_A.
Probab=22.25 E-value=76 Score=31.19 Aligned_cols=43 Identities=23% Similarity=0.658 Sum_probs=24.9
Q ss_pred cEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecc
Q 048359 142 DVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFA 199 (325)
Q Consensus 142 DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~S 199 (325)
..-+|+||+|||-.-.|++ -|+.+++||++.+. .+..+ |-|+.
T Consensus 289 ~~~~I~TGnWGCGaFgGd~-------------~lK~lIQ~lAas~a-~r~l~-Y~tf~ 331 (340)
T PF05028_consen 289 NIPPIATGNWGCGAFGGDP-------------QLKFLIQWLAASLA-GRPLV-YYTFG 331 (340)
T ss_dssp CS--EEEESTTCCCC-B-H-------------HHHHHHHHHHHHHC-T--EE-EE-TT
T ss_pred ccceEecCCcCccccCCCH-------------HHHHHHHHHHHHhc-CCCeE-EEecC
Confidence 4558999999774445543 46788999988875 34444 55543
No 54
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=22.20 E-value=42 Score=28.44 Aligned_cols=50 Identities=16% Similarity=0.238 Sum_probs=31.9
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAP 200 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP 200 (325)
..|+||+..|-= +.. .+ . -.+.|+..++++++-+.+.. ++.++++-+..|
T Consensus 50 ~p~~vvi~~G~N-D~~-~~------~-~~~~~~~~~~~lv~~i~~~~--~~~~iil~~~~p 99 (171)
T cd04502 50 QPRRVVLYAGDN-DLA-SG------R-TPEEVLRDFRELVNRIRAKL--PDTPIAIISIKP 99 (171)
T ss_pred CCCEEEEEEecC-ccc-CC------C-CHHHHHHHHHHHHHHHHHHC--CCCcEEEEEecC
Confidence 468999988842 000 11 1 15678888888888776543 356678777655
No 55
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=21.88 E-value=66 Score=31.12 Aligned_cols=27 Identities=19% Similarity=0.175 Sum_probs=22.3
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|+||||-..-|...||+=+++.
T Consensus 154 l~g~kv~~vGD~~~~~v~~Sl~~~~~~ 180 (305)
T PRK00856 154 LEGLKVAIVGDIKHSRVARSNIQALTR 180 (305)
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHH
Confidence 689999999997655788998887764
No 56
>COG1578 Uncharacterized conserved protein [Function unknown]
Probab=21.54 E-value=1.2e+02 Score=29.09 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=32.7
Q ss_pred ccCCCCCHHHHHHHhcCCcEEEEeccchhhHHHHHHH
Q 048359 26 TVENRFDPKLMLEKLRNKRLVFAGDSIGRNQWESLLC 62 (325)
Q Consensus 26 C~LprFd~~~fLe~lRgK~i~FVGDSl~Rnq~~SL~C 62 (325)
=.|-.+|+.+|++.++|.++.+++|--+.=+|.-++=
T Consensus 135 ~~l~i~d~~k~~~~l~~a~VlYl~DNaGEi~FD~vli 171 (285)
T COG1578 135 AELYIDDSPKLLELLKNASVLYLTDNAGEIVFDKVLI 171 (285)
T ss_pred CcccccchHHHHHHhccCcEEEEecCCccHHHHHHHH
Confidence 4677899999999999999999999999998887543
No 57
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=20.76 E-value=73 Score=31.25 Aligned_cols=26 Identities=31% Similarity=0.363 Sum_probs=20.7
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|+||||-.+ |...||+-++..
T Consensus 154 l~gl~ia~vGD~~~-~v~~Sl~~~~~~ 179 (334)
T PRK01713 154 LSEISYVYIGDARN-NMGNSLLLIGAK 179 (334)
T ss_pred cCCcEEEEECCCcc-CHHHHHHHHHHH
Confidence 56889999999544 588899887763
Done!