Query 048359
Match_columns 325
No_of_seqs 137 out of 747
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 15:14:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048359.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048359hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hp4_A GDSL-esterase; psychrot 75.8 0.85 2.9E-05 37.5 1.2 46 140-198 66-111 (185)
2 4hf7_A Putative acylhydrolase; 74.5 0.9 3.1E-05 38.8 1.0 53 140-202 78-130 (209)
3 1yzf_A Lipase/acylhydrolase; s 73.4 9.5 0.00032 30.8 7.1 49 140-201 67-115 (195)
4 3rjt_A Lipolytic protein G-D-S 67.8 1.7 5.7E-05 36.2 1.2 53 140-197 83-137 (216)
5 4h08_A Putative hydrolase; GDS 66.2 18 0.00063 29.8 7.5 51 140-203 74-124 (200)
6 3mil_A Isoamyl acetate-hydroly 61.1 2.2 7.5E-05 36.3 0.6 53 140-201 72-124 (240)
7 1ivn_A Thioesterase I; hydrola 60.5 2.3 7.7E-05 35.2 0.6 46 140-198 62-107 (190)
8 1yzf_A Lipase/acylhydrolase; s 57.8 2.7 9.1E-05 34.3 0.6 13 43-55 2-14 (195)
9 4h08_A Putative hydrolase; GDS 56.5 5.7 0.00019 33.1 2.5 21 44-64 22-42 (200)
10 2q0q_A ARYL esterase; SGNH hyd 54.1 3.2 0.00011 34.8 0.5 53 141-200 84-141 (216)
11 3dc7_A Putative uncharacterize 53.7 4.8 0.00017 34.3 1.6 142 140-314 82-227 (232)
12 1fxw_F Alpha2, platelet-activa 52.1 7.4 0.00025 33.3 2.6 121 140-309 94-215 (229)
13 2hsj_A Putative platelet activ 51.9 4.9 0.00017 33.6 1.3 52 140-202 85-136 (214)
14 3dci_A Arylesterase; SGNH_hydr 51.1 3.8 0.00013 35.3 0.5 54 141-201 102-158 (232)
15 3p94_A GDSL-like lipase; serin 50.6 4.3 0.00015 33.5 0.8 53 140-202 74-126 (204)
16 1vjg_A Putative lipase from th 48.8 3.9 0.00013 34.6 0.2 53 140-201 88-140 (218)
17 3bzw_A Putative lipase; protei 48.5 6.7 0.00023 34.7 1.7 28 169-198 141-168 (274)
18 1es9_A PAF-AH, platelet-activa 44.8 7.2 0.00025 33.3 1.3 121 140-309 93-214 (232)
19 3p94_A GDSL-like lipase; serin 43.2 73 0.0025 25.7 7.4 13 43-55 23-35 (204)
20 2vpt_A Lipolytic enzyme; ester 41.1 6 0.00021 33.5 0.2 49 140-201 83-131 (215)
21 2waa_A Acetyl esterase, xylan 41.1 8.4 0.00029 35.9 1.2 45 140-197 225-272 (347)
22 1fll_X B-cell surface antigen 39.0 17 0.00057 21.4 1.8 11 284-294 6-16 (26)
23 2w9x_A AXE2A, CJCE2B, putative 38.7 9.6 0.00033 35.7 1.2 55 140-197 236-293 (366)
24 2wao_A Endoglucanase E; plant 36.0 9.4 0.00032 35.3 0.6 48 140-197 213-260 (341)
25 3tpf_A Otcase, ornithine carba 35.2 19 0.00065 33.6 2.6 25 40-66 143-168 (307)
26 3q98_A Transcarbamylase; rossm 33.9 22 0.00075 34.4 2.9 27 40-66 189-220 (399)
27 4f2g_A Otcase 1, ornithine car 33.4 19 0.00064 33.7 2.2 25 40-66 152-176 (309)
28 3r7f_A Aspartate carbamoyltran 32.3 22 0.00074 33.2 2.4 27 40-66 145-171 (304)
29 3grf_A Ornithine carbamoyltran 32.1 23 0.00078 33.4 2.6 27 39-66 158-184 (328)
30 3skv_A SSFX3; jelly roll, GDSL 31.7 17 0.00057 34.8 1.6 51 140-201 244-294 (385)
31 2o14_A Hypothetical protein YX 31.2 18 0.00062 34.1 1.8 130 142-314 232-366 (375)
32 4amu_A Ornithine carbamoyltran 30.2 25 0.00086 33.6 2.6 26 40-66 178-203 (365)
33 1k7c_A Rhamnogalacturonan acet 29.2 17 0.00058 31.4 1.1 67 169-261 108-174 (233)
34 2yfk_A Aspartate/ornithine car 28.9 30 0.001 33.7 2.9 27 40-66 186-217 (418)
35 3csu_A Protein (aspartate carb 27.1 30 0.001 32.3 2.5 27 40-66 152-178 (310)
36 1pg5_A Aspartate carbamoyltran 26.5 37 0.0013 31.4 3.0 27 40-66 147-173 (299)
37 3sds_A Ornithine carbamoyltran 25.9 31 0.0011 32.8 2.3 24 41-66 187-210 (353)
38 3gd5_A Otcase, ornithine carba 25.6 32 0.0011 32.3 2.3 24 40-65 155-178 (323)
39 4ekn_B Aspartate carbamoyltran 25.3 34 0.0012 31.8 2.5 27 40-66 149-175 (306)
40 4ep1_A Otcase, ornithine carba 25.1 33 0.0011 32.5 2.3 25 40-66 177-201 (340)
41 4a8t_A Putrescine carbamoyltra 24.9 33 0.0011 32.4 2.3 25 40-66 173-197 (339)
42 4a8p_A Putrescine carbamoyltra 23.3 37 0.0013 32.3 2.3 25 40-66 151-175 (355)
43 1vcc_A DNA topoisomerase I; DN 22.6 16 0.00054 27.0 -0.3 15 43-57 55-70 (77)
44 2qru_A Uncharacterized protein 22.4 62 0.0021 27.9 3.5 23 42-64 95-117 (274)
45 1oth_A Protein (ornithine tran 21.5 38 0.0013 31.7 2.0 25 40-66 153-177 (321)
No 1
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=75.83 E-value=0.85 Score=37.50 Aligned_cols=46 Identities=9% Similarity=0.128 Sum_probs=30.1
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEec
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTF 198 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~ 198 (325)
..|+|||..|.--. . .+. ..+.|+..++.+++.+.+. ..+|++-++
T Consensus 66 ~pd~vvi~~G~ND~-~-~~~-------~~~~~~~~~~~~i~~~~~~----~~~vvl~~~ 111 (185)
T 3hp4_A 66 EPTHVLIELGANDG-L-RGF-------PVKKMQTNLTALVKKSQAA----NAMTALMEI 111 (185)
T ss_dssp CCSEEEEECCHHHH-H-TTC-------CHHHHHHHHHHHHHHHHHT----TCEEEEECC
T ss_pred CCCEEEEEeecccC-C-CCc-------CHHHHHHHHHHHHHHHHHc----CCeEEEEeC
Confidence 57999999996411 0 111 2467888888888888763 345666553
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=74.51 E-value=0.9 Score=38.83 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=30.6
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVH 202 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~H 202 (325)
..|+|||..|.= +... +.. ....+.+...++++++.+.+ ...+|++-|..|..
T Consensus 78 ~Pd~vvi~~G~N-D~~~-~~~----~~~~~~~~~~l~~ii~~~~~----~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 78 SPALVVINAGTN-DVAE-NTG----AYNEDYTFGNIASMAELAKA----NKIKVILTSVLPAA 130 (209)
T ss_dssp CCSEEEECCCHH-HHTT-SSS----SCCHHHHHHHHHHHHHHHHH----TTCEEEEECCCCCS
T ss_pred CCCEEEEEeCCC-cCcc-ccc----cccHHHHHHHHHHhhHHHhc----cCceEEEEeeeccC
Confidence 469999988831 0000 100 11234556666677665543 46689999988854
No 3
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=73.37 E-value=9.5 Score=30.84 Aligned_cols=49 Identities=18% Similarity=0.173 Sum_probs=31.5
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPV 201 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~ 201 (325)
..|+|||..|.--.. . +.. ...+.|+..++.+++.+. ..+|++-+..|.
T Consensus 67 ~pd~vvi~~G~ND~~-~-~~~-----~~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~ 115 (195)
T 1yzf_A 67 KPDEVVIFFGANDAS-L-DRN-----ITVATFRENLETMIHEIG------SEKVILITPPYA 115 (195)
T ss_dssp CCSEEEEECCTTTTC-T-TSC-----CCHHHHHHHHHHHHHHHC------GGGEEEECCCCC
T ss_pred CCCEEEEEeeccccC-c-cCC-----CCHHHHHHHHHHHHHHhc------CCEEEEEcCCCC
Confidence 579999999964111 1 111 124677888888777664 456888777765
No 4
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=67.81 E-value=1.7 Score=36.23 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=31.4
Q ss_pred CCcEEEEccCcc--ccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEe
Q 048359 140 DADVLVFNTGHW--GCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRT 197 (325)
Q Consensus 140 ~~DVlV~NtGhW--~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt 197 (325)
..|+|||..|.= ...+..+... ......+.|+..++.+++.+.+. ..+|++-|
T Consensus 83 ~pd~vvi~~G~ND~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~----~~~vil~~ 137 (216)
T 3rjt_A 83 QPDYVSLMIGVNDVWRQFDMPLVV-ERHVGIDEYRDTLRHLVATTKPR----VREMFLLS 137 (216)
T ss_dssp CCSEEEEECCHHHHHHHHHSTTCG-GGCCCHHHHHHHHHHHHHHHGGG----SSEEEEEC
T ss_pred CCCEEEEEeeccccchhhcccccc-ccCCCHHHHHHHHHHHHHHHHhc----CCeEEEEC
Confidence 479999999953 1111111000 00123677899999998888654 45677765
No 5
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=66.16 E-value=18 Score=29.82 Aligned_cols=51 Identities=27% Similarity=0.472 Sum_probs=36.7
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHF 203 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf 203 (325)
..|+|||+.|..-. + ...+.|+..|+.+++.+.+.. .+.+|++-+..|-..
T Consensus 74 ~pd~Vvi~~G~ND~----~-------~~~~~~~~~l~~ii~~l~~~~--p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 74 KFDVIHFNNGLHGF----D-------YTEEEYDKSFPKLIKIIRKYA--PKAKLIWANTTPVRT 124 (200)
T ss_dssp CCSEEEECCCSSCT----T-------SCHHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCEE
T ss_pred CCCeEEEEeeeCCC----C-------CCHHHHHHHHHHHHHHHhhhC--CCccEEEeccCCCcc
Confidence 57999999997621 0 124678888888888886542 467889998888543
No 6
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=61.08 E-value=2.2 Score=36.29 Aligned_cols=53 Identities=8% Similarity=-0.043 Sum_probs=33.3
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPV 201 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~ 201 (325)
..|+|||..|.=-....... ....+.|+..++.+++.+.+. ..+|++-+..|.
T Consensus 72 ~pd~vvi~~G~ND~~~~~~~-----~~~~~~~~~~l~~~i~~~~~~----~~~vil~~~~p~ 124 (240)
T 3mil_A 72 NIVMATIFLGANDACSAGPQ-----SVPLPEFIDNIRQMVSLMKSY----HIRPIIIGPGLV 124 (240)
T ss_dssp CEEEEEEECCTTTTSSSSTT-----CCCHHHHHHHHHHHHHHHHHT----TCEEEEECCCCC
T ss_pred CCCEEEEEeecCcCCccCCC-----CCCHHHHHHHHHHHHHHHHHc----CCeEEEEcCCCC
Confidence 58999999995311010011 113567888888888877653 347888876664
No 7
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=60.54 E-value=2.3 Score=35.24 Aligned_cols=46 Identities=4% Similarity=0.154 Sum_probs=29.7
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEec
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTF 198 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~ 198 (325)
..|+|||..|.=-. . .+. ..+.|+..++.+++.+.+. ..+|++-+.
T Consensus 62 ~pd~Vii~~G~ND~-~-~~~-------~~~~~~~~l~~li~~~~~~----~~~vil~~~ 107 (190)
T 1ivn_A 62 QPRWVLVELGGNDG-L-RGF-------QPQQTEQTLRQILQDVKAA----NAEPLLMQI 107 (190)
T ss_dssp CCSEEEEECCTTTT-S-SSC-------CHHHHHHHHHHHHHHHHHT----TCEEEEECC
T ss_pred CCCEEEEEeecccc-c-cCC-------CHHHHHHHHHHHHHHHHHc----CCCEEEEec
Confidence 46999999985311 0 011 2467888888888888653 346777664
No 8
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=57.78 E-value=2.7 Score=34.30 Aligned_cols=13 Identities=38% Similarity=0.705 Sum_probs=11.6
Q ss_pred CcEEEEeccchhh
Q 048359 43 KRLVFAGDSIGRN 55 (325)
Q Consensus 43 K~i~FVGDSl~Rn 55 (325)
|+|+|+|||++..
T Consensus 2 ~~i~~~GDS~t~g 14 (195)
T 1yzf_A 2 RKIVLFGDSITAG 14 (195)
T ss_dssp EEEEEEESHHHHC
T ss_pred CeEEEEccccccC
Confidence 5799999999986
No 9
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=56.49 E-value=5.7 Score=33.07 Aligned_cols=21 Identities=24% Similarity=0.460 Sum_probs=14.5
Q ss_pred cEEEEeccchhhHHHHHHHhh
Q 048359 44 RLVFAGDSIGRNQWESLLCML 64 (325)
Q Consensus 44 ~i~FVGDSl~Rnq~~SL~ClL 64 (325)
||+|+||||+..-...|.-+|
T Consensus 22 rVl~iGDSit~G~~~~l~~~l 42 (200)
T 4h08_A 22 HVLLIGNSITRGYYGKVEAAL 42 (200)
T ss_dssp EEEEEESHHHHHHHHHHHHHT
T ss_pred eEEEEchhHHhhhHHHHHHHh
Confidence 699999999976333444444
No 10
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=54.14 E-value=3.2 Score=34.78 Aligned_cols=53 Identities=9% Similarity=0.060 Sum_probs=32.5
Q ss_pred CcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhc-----CCCcceEEEEeccC
Q 048359 141 ADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEV-----NTSKTQVFFRTFAP 200 (325)
Q Consensus 141 ~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~-----~~~~~~vf~Rt~SP 200 (325)
.|+|||+.|.--.....+. ..+.|+..++.+++.+.+.- ..++.+|++-+..|
T Consensus 84 ~d~vvi~~G~ND~~~~~~~-------~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p~ 141 (216)
T 2q0q_A 84 LDLVIIMLGTNDTKAYFRR-------TPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPPP 141 (216)
T ss_dssp CSEEEEECCTGGGSGGGCC-------CHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECCC
T ss_pred CCEEEEEecCcccchhcCC-------CHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCCC
Confidence 5999999997521111111 25678888888888886542 00346777775543
No 11
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=53.67 E-value=4.8 Score=34.31 Aligned_cols=142 Identities=11% Similarity=0.061 Sum_probs=68.7
Q ss_pred CCcEEEEccCcc--ccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCCCCCCCCCCCCCCCC
Q 048359 140 DADVLVFNTGHW--GCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHFRGGDWRTGGSCHME 217 (325)
Q Consensus 140 ~~DVlV~NtGhW--~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~GG~C~~~ 217 (325)
..|+|||..|.- ......++ + .-...+.|+..++.+++.+.+.. +..+|++-+ |-... ..|...
T Consensus 82 ~pd~Vii~~G~ND~~~~~~~~~-~--~~~~~~~f~~~l~~li~~l~~~~--P~~~iil~~--p~~~~-~~~~~~------ 147 (232)
T 3dc7_A 82 DADFIAVFGGVNDYGRDQPLGQ-Y--GDCDMTTFYGALMMLLTGLQTNW--PTVPKLFIS--AIHIG-SDFGGS------ 147 (232)
T ss_dssp TCSEEEEECCHHHHHTTCCCCC-T--TCCSTTSHHHHHHHHHHHHHHHC--TTSCEEEEE--CCCCC-SCSBTT------
T ss_pred CCCEEEEEEeccccccCcCCcc-c--cccchHHHHHHHHHHHHHHHHhC--CCCeEEEEe--CcccC-CccCCc------
Confidence 679999999965 11011111 0 00123457777777777776542 345677744 44331 122110
Q ss_pred CccCCCCCCCCCchHHHHHHHHHHHHhcCCCCceEEeeccchhhhhhc--CCCCCCCCCCCCCCCCCCCCCcccccCCCc
Q 048359 218 TLPELGTSLVPPETWVQFKMVTDVLLANTSTWKFDVLNVTYMTAQRKD--GHSSLYYMGPKASPAPIHRQDCSHWCLPGV 295 (325)
Q Consensus 218 t~P~~~~~~~~~~~w~~~~~~~~~~~~~~~~~rv~lLDIT~ls~~R~D--gHps~y~~~~~~~~~~~~~~DC~HWCLPGv 295 (325)
..-..+. .....-...+.++++.++ ..+.++|+...+...+. +++..| ..|.+|----|
T Consensus 148 ~~~~~~~--~~~~~~~~~~~i~~~a~~----~~v~~iD~~~~~~~~~~~~~~~~~~------------~~DgvHpn~~G- 208 (232)
T 3dc7_A 148 FSAVTNG--LGYRQSDYEAAIAQMTAD----YGVPHLSLYRDAGMTFAIPAQAAIY------------SVDTLHPNNAG- 208 (232)
T ss_dssp BCSSCCT--TSCCHHHHHHHHHHHHHH----HTCCEEEHHHHSSCCTTSHHHHHHH------------BSSSSSBCHHH-
T ss_pred ccccccc--cchHHHHHHHHHHHHHHH----cCCcEEecccccCCCccchhhhhhc------------cCCCCCCCHHH-
Confidence 0000000 011101223444444433 35889999876543321 122211 36788854323
Q ss_pred chHHHHHHHHHHhcCcccc
Q 048359 296 PDSWNELLYALFLKRKTTH 314 (325)
Q Consensus 296 ~D~WNelL~~~L~~~~~~~ 314 (325)
-..|-+.|+..|.+..+.+
T Consensus 209 ~~~iA~~i~~~l~~~~~~~ 227 (232)
T 3dc7_A 209 HRVIARKLQSFLDSHFLEH 227 (232)
T ss_dssp HHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4677888888877655443
No 12
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=52.05 E-value=7.4 Score=33.30 Aligned_cols=121 Identities=17% Similarity=0.130 Sum_probs=68.4
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCCCCCCCCCCCCCCCCCc
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHFRGGDWRTGGSCHMETL 219 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~GG~C~~~t~ 219 (325)
..|+|||..|.--. |. -.+.|...++.+++.+.+.. ...+|++-+..|... ...
T Consensus 94 ~pd~vvi~~G~ND~----~~-------~~~~~~~~l~~~i~~l~~~~--p~~~iil~~~~p~~~-----------~~~-- 147 (229)
T 1fxw_F 94 KPKVIVVWVGTNNH----EN-------TAEEVAGGIEAIVQLINTRQ--PQAKIIVLGLLPRGE-----------KPN-- 147 (229)
T ss_dssp CCSEEEEECCTTCT----TS-------CHHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCSS-----------SCC--
T ss_pred CCCEEEEEEecCCC----CC-------CHHHHHHHHHHHHHHHHHHC--CCCeEEEEeCCCCCC-----------chh--
Confidence 46999999986511 21 24568888888888876542 356788877766432 100
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHhcCC-CCceEEeeccchhhhhhcCCCCCCCCCCCCCCCCCCCCCcccccCCCcchH
Q 048359 220 PELGTSLVPPETWVQFKMVTDVLLANTS-TWKFDVLNVTYMTAQRKDGHSSLYYMGPKASPAPIHRQDCSHWCLPGVPDS 298 (325)
Q Consensus 220 P~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~rv~lLDIT~ls~~R~DgHps~y~~~~~~~~~~~~~~DC~HWCLPGv~D~ 298 (325)
++ ....+.+++.+++... ...+.++|+..... .+++.+. .....|-+|----| -..
T Consensus 148 ~~----------~~~~~~~n~~l~~~a~~~~~v~~iD~~~~~~-~~~g~~~-----------~~~~~DgvHpn~~G-~~~ 204 (229)
T 1fxw_F 148 PL----------RQKNAKVNQLLKVSLPKLANVQLLDTDGGFV-HSDGAIS-----------CHDMFDFLHLTGGG-YAK 204 (229)
T ss_dssp HH----------HHHHHHHHHHHHHHSSSSSSEEEECCCCSCB-CTTSCBC-----------TTTBTTSSSBCHHH-HHH
T ss_pred hH----------HHHHHHHHHHHHHHHhcCCCeEEEeCHHHhh-ccCCCcc-----------hhhcCCCCCcCHHH-HHH
Confidence 10 1223445555554322 36899999987542 1222211 11235888866444 355
Q ss_pred HHHHHHHHHhc
Q 048359 299 WNELLYALFLK 309 (325)
Q Consensus 299 WNelL~~~L~~ 309 (325)
|-+.|+..|..
T Consensus 205 ~a~~l~~~l~~ 215 (229)
T 1fxw_F 205 ICKPLHELIMQ 215 (229)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666666543
No 13
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=51.92 E-value=4.9 Score=33.60 Aligned_cols=52 Identities=12% Similarity=0.157 Sum_probs=35.1
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVH 202 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~H 202 (325)
..|+|||..|.--... +. ..+.|+..++.+++.+.+.. +..+|++-+..|..
T Consensus 85 ~pd~vvi~~G~ND~~~--~~-------~~~~~~~~l~~~i~~l~~~~--p~~~iil~~~~p~~ 136 (214)
T 2hsj_A 85 AVDKIFLLIGTNDIGK--DV-------PVNEALNNLEAIIQSVARDY--PLTEIKLLSILPVN 136 (214)
T ss_dssp CCCEEEEECCHHHHHT--TC-------CHHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCC
T ss_pred CCCEEEEEEecCcCCc--CC-------CHHHHHHHHHHHHHHHHHhC--CCCeEEEEecCCCC
Confidence 4699999998641111 11 24668888888888886642 35678998887754
No 14
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=51.12 E-value=3.8 Score=35.30 Aligned_cols=54 Identities=9% Similarity=0.121 Sum_probs=33.1
Q ss_pred CcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcC---CCcceEEEEeccCC
Q 048359 141 ADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVN---TSKTQVFFRTFAPV 201 (325)
Q Consensus 141 ~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~---~~~~~vf~Rt~SP~ 201 (325)
+|+|||..|.=-.....+ ...+.|+..|+.+++.+.+... .++.+|++-+..|-
T Consensus 102 ~d~VvI~~GtND~~~~~~-------~~~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~ 158 (232)
T 3dci_A 102 LDLVIIMLGTNDIKPVHG-------GRAEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPC 158 (232)
T ss_dssp CSEEEEECCTTTTSGGGT-------SSHHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCC
T ss_pred CCEEEEEeccCCCccccC-------CCHHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCc
Confidence 599999999531101111 1256788888888888876421 03567777764443
No 15
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=50.58 E-value=4.3 Score=33.48 Aligned_cols=53 Identities=11% Similarity=0.137 Sum_probs=33.6
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVH 202 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~H 202 (325)
..|+|||..|.=-.....+ . ...+.|+..++.+++.+.+ ...+|++-+..|..
T Consensus 74 ~pd~vvi~~G~ND~~~~~~-~-----~~~~~~~~~~~~~i~~~~~----~~~~vil~~~~p~~ 126 (204)
T 3p94_A 74 KPKAVVILAGINDIAHNNG-V-----IALENVFGNLVSMAELAKA----NHIKVIFCSVLPAY 126 (204)
T ss_dssp CEEEEEEECCHHHHTTTTS-C-----CCHHHHHHHHHHHHHHHHH----TTCEEEEECCCCCS
T ss_pred CCCEEEEEeecCccccccC-C-----CCHHHHHHHHHHHHHHHHh----CCCeEEEEeCCCCC
Confidence 4799999999531101111 0 1256788888888877764 35678888887754
No 16
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=48.81 E-value=3.9 Score=34.58 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=33.0
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPV 201 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~ 201 (325)
..|+|||..|.=-.....+. .....+.|+..++.+++.+.+. .+|++-+..|.
T Consensus 88 ~pd~vvi~~G~ND~~~~~~~----~~~~~~~~~~~l~~li~~l~~~-----~~iil~~~~p~ 140 (218)
T 1vjg_A 88 YNSLVVFSFGLNDTTLENGK----PRVSIAETIKNTREILTQAKKL-----YPVLMISPAPY 140 (218)
T ss_dssp SEEEEEEECCHHHHCEETTE----ESSCHHHHHHHHHHHHHHHHHH-----SCEEEECCCCC
T ss_pred CCCEEEEEecCCcchhhccc----ccCCHHHHHHHHHHHHHHHHHh-----CcEEEECCCCc
Confidence 57999999996411101010 0113567888888888888664 46888777554
No 17
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=48.52 E-value=6.7 Score=34.73 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEEec
Q 048359 169 HAYRRSIETVVKWIHNEVNTSKTQVFFRTF 198 (325)
Q Consensus 169 ~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~ 198 (325)
+.|+..|+.+++.+.+.. ++.+|++-+.
T Consensus 141 ~~~~~~l~~li~~lr~~~--p~a~Iilitp 168 (274)
T 3bzw_A 141 DTYRGRINIGITQLKKLF--PDKQIVLLTP 168 (274)
T ss_dssp SSHHHHHHHHHHHHHHHC--TTSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHC--CCCeEEEEec
Confidence 457777888887776542 3567888554
No 18
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=44.85 E-value=7.2 Score=33.31 Aligned_cols=121 Identities=16% Similarity=0.153 Sum_probs=66.9
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCCCCCCCCCCCCCCCCCc
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHFRGGDWRTGGSCHMETL 219 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~GG~C~~~t~ 219 (325)
..|+|||..|.--.. ...+.|...++.+++.+.+.. .+.+|++-+..|.-. .. .
T Consensus 93 ~pd~vvi~~G~ND~~-----------~~~~~~~~~l~~~i~~l~~~~--p~~~ii~~~~~p~~~-----------~~-~- 146 (232)
T 1es9_A 93 RPKIVVVWVGTNNHG-----------HTAEQVTGGIKAIVQLVNERQ--PQARVVVLGLLPRGQ-----------HP-N- 146 (232)
T ss_dssp CCSEEEEECCTTCTT-----------SCHHHHHHHHHHHHHHHHHHS--TTCEEEEECCCCCSS-----------SC-C-
T ss_pred CCCEEEEEeecCCCC-----------CCHHHHHHHHHHHHHHHHHHC--CCCeEEEecCCCCCC-----------Cc-h-
Confidence 579999999864111 124667888888888876642 366889888877431 10 0
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHh-cCCCCceEEeeccchhhhhhcCCCCCCCCCCCCCCCCCCCCCcccccCCCcchH
Q 048359 220 PELGTSLVPPETWVQFKMVTDVLLA-NTSTWKFDVLNVTYMTAQRKDGHSSLYYMGPKASPAPIHRQDCSHWCLPGVPDS 298 (325)
Q Consensus 220 P~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~rv~lLDIT~ls~~R~DgHps~y~~~~~~~~~~~~~~DC~HWCLPGv~D~ 298 (325)
++ ....+.+++.+++ ......+.++|+.....- .++.+ ......|-+|----| -..
T Consensus 147 ~~----------~~~~~~~n~~l~~~~a~~~~v~~iD~~~~~~~-~~g~~-----------~~~~~~Dg~Hpn~~G-~~~ 203 (232)
T 1es9_A 147 PL----------REKNRRVNELVRAALAGHPRAHFLDADPGFVH-SDGTI-----------SHHDMYDYLHLSRLG-YTP 203 (232)
T ss_dssp HH----------HHHHHHHHHHHHHHHHSCTTEEEECCCCCCSC-TTSCC-----------CTTTBTTSSSBCHHH-HHH
T ss_pred hH----------HHHHHHHHHHHHHHHhhcCCCEEEeChHHhcC-CCCCc-----------ChhhcCCCCCCCHHH-HHH
Confidence 11 0122333444433 223467999999875431 12211 011235888865444 345
Q ss_pred HHHHHHHHHhc
Q 048359 299 WNELLYALFLK 309 (325)
Q Consensus 299 WNelL~~~L~~ 309 (325)
|-+.|+..|..
T Consensus 204 ~a~~i~~~l~~ 214 (232)
T 1es9_A 204 VCRALHSLLLR 214 (232)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55666555543
No 19
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=43.18 E-value=73 Score=25.71 Aligned_cols=13 Identities=38% Similarity=0.664 Sum_probs=11.4
Q ss_pred CcEEEEeccchhh
Q 048359 43 KRLVFAGDSIGRN 55 (325)
Q Consensus 43 K~i~FVGDSl~Rn 55 (325)
++|+|+|||++..
T Consensus 23 ~~i~~~GDSit~g 35 (204)
T 3p94_A 23 SNVVFMGNSITDG 35 (204)
T ss_dssp EEEEEEESHHHHT
T ss_pred ceEEEEccchhhc
Confidence 3899999999975
No 20
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=41.13 E-value=6 Score=33.47 Aligned_cols=49 Identities=14% Similarity=0.286 Sum_probs=27.7
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPV 201 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~ 201 (325)
..|+|||..|.=-.... ... .+..++.+++.+.+. . ++.+|++-++.|.
T Consensus 83 ~pd~vvi~~G~ND~~~~-~~~----------~~~~l~~li~~i~~~-~-p~~~ii~~~~~p~ 131 (215)
T 2vpt_A 83 NPDVVFLWIGGNDLLLN-GNL----------NATGLSNLIDQIFTV-K-PNVTLFVADYYPW 131 (215)
T ss_dssp CCSEEEEECCHHHHHHH-CCC----------CHHHHHHHHHHHHHH-C-TTCEEEEECCCSC
T ss_pred CCCEEEEEccccccCCC-CCh----------hHHHHHHHHHHHHHh-C-CCCEEEEEeCCCC
Confidence 57999999995411010 000 134555566666544 2 4677888877664
No 21
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=41.11 E-value=8.4 Score=35.85 Aligned_cols=45 Identities=9% Similarity=0.176 Sum_probs=29.1
Q ss_pred CCcEEEEccCc---cccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEe
Q 048359 140 DADVLVFNTGH---WGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRT 197 (325)
Q Consensus 140 ~~DVlV~NtGh---W~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt 197 (325)
..|+|||+.|- +.. . ...+.|+..++.+++-+.+.. ++.+|++-+
T Consensus 225 ~Pd~VvI~lG~ND~~~~-----~------~~~~~~~~~l~~li~~ir~~~--p~~~I~l~~ 272 (347)
T 2waa_A 225 QPDLIISAIGTNDFSPG-----I------PDRATYINTYTRFVRTLLDNH--PQATIVLTE 272 (347)
T ss_dssp CCSEEEECCCHHHHSSS-----C------CCHHHHHHHHHHHHHHHHHHC--TTCEEEECC
T ss_pred CCCEEEEEccccCCCCC-----C------CcHHHHHHHHHHHHHHHHHHC--CCCEEEEEe
Confidence 46999999993 211 0 124568888888888776542 356677654
No 22
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=39.00 E-value=17 Score=21.40 Aligned_cols=11 Identities=27% Similarity=0.172 Sum_probs=9.3
Q ss_pred CCCcccccCCC
Q 048359 284 RQDCSHWCLPG 294 (325)
Q Consensus 284 ~~DC~HWCLPG 294 (325)
.+|-+|||+|-
T Consensus 6 vqeTl~~~qPV 16 (26)
T 1fll_X 6 VQETLHGSQPV 16 (26)
T ss_dssp CCCCCCCSSSC
T ss_pred hhHHhhcCccc
Confidence 47899999984
No 23
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=38.72 E-value=9.6 Score=35.71 Aligned_cols=55 Identities=16% Similarity=0.269 Sum_probs=32.3
Q ss_pred CCcEEEEccCc---cccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEe
Q 048359 140 DADVLVFNTGH---WGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRT 197 (325)
Q Consensus 140 ~~DVlV~NtGh---W~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt 197 (325)
..|+|||+-|- +.. ...+++..+.....+.|+..++.+++-+.+.. ++.+|++-+
T Consensus 236 ~Pd~VvI~lGtND~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~ir~~~--p~a~Iil~~ 293 (366)
T 2w9x_A 236 KPQVIVIGLGTNDFSTA-LNDNERWKTREALHADYVANYVKFVKQLHSNN--ARAQFILMN 293 (366)
T ss_dssp CCSEEEEECCHHHHSSC-CCTTSSCCSHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEEEE
T ss_pred CCCEEEEeCccCCCCCC-CCCcccccccchHHHHHHHHHHHHHHHHHHHC--CCCeEEEEe
Confidence 57999999993 311 11111110111124678888888888886642 356777766
No 24
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=36.01 E-value=9.4 Score=35.26 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=29.7
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEe
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRT 197 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt 197 (325)
..|+|||+.|-= + ...+. ...+.|+..++.+++.|.+.. ++.+|++-+
T Consensus 213 ~PdlVvI~lGtN-D-~~~~~------~~~~~~~~~l~~li~~ir~~~--p~a~Iil~~ 260 (341)
T 2wao_A 213 VPQVVVINLGTN-D-FSTSF------ADKTKFVTAYKNLISEVRRNY--PDAHIFCCV 260 (341)
T ss_dssp CCSEEEEECCHH-H-HSSSC------CCHHHHHHHHHHHHHHHHHHC--TTCEEEEEE
T ss_pred CCCEEEEeCccc-c-CCCCC------CCHHHHHHHHHHHHHHHHHHC--CCCeEEEEe
Confidence 469999999931 0 00010 124678888888888776542 356777776
No 25
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=35.15 E-value=19 Score=33.58 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=20.9
Q ss_pred hc-CCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LR-NKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lR-gK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+. |++|+|||| . -|...||+.++..
T Consensus 143 l~~gl~va~vGD-~-~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 143 QNGIAKVAFIGD-S-NNMCNSWLITAAI 168 (307)
T ss_dssp GGGCCEEEEESC-S-SHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcC-C-CccHHHHHHHHHH
Confidence 57 999999999 3 5689999988863
No 26
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=33.95 E-value=22 Score=34.44 Aligned_cols=27 Identities=15% Similarity=0.391 Sum_probs=21.0
Q ss_pred hcCCcEEEEec---cchh--hHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGD---SIGR--NQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGD---Sl~R--nq~~SL~ClL~~ 66 (325)
++|++|++||| |.+| |...||+.++..
T Consensus 189 l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~ 220 (399)
T 3q98_A 189 LKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTR 220 (399)
T ss_dssp GTTCEEEEECCCCSSCCCCTHHHHHHHHHHGG
T ss_pred cCCCEEEEEEecccccCcchHHHHHHHHHHHH
Confidence 46889999998 3444 788999988864
No 27
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=33.45 E-value=19 Score=33.69 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=21.1
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|+||||- -|...||+.++..
T Consensus 152 l~glkva~vGD~--~~va~Sl~~~~~~ 176 (309)
T 4f2g_A 152 IRGKTVAWVGDA--NNMLYTWIQAARI 176 (309)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--cchHHHHHHHHHH
Confidence 589999999994 5689999988874
No 28
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=32.27 E-value=22 Score=33.18 Aligned_cols=27 Identities=15% Similarity=0.090 Sum_probs=22.9
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|+||||-..-|...||+-++..
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~ 171 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTR 171 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 689999999997666799999988864
No 29
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=32.11 E-value=23 Score=33.35 Aligned_cols=27 Identities=19% Similarity=0.297 Sum_probs=22.8
Q ss_pred HhcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 39 KLRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 39 ~lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
.+.|++|+||||-.+ |...||+-+|..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 184 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCAL 184 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHH
Confidence 477899999999766 699999988863
No 30
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=31.68 E-value=17 Score=34.79 Aligned_cols=51 Identities=16% Similarity=0.180 Sum_probs=30.1
Q ss_pred CCcEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCC
Q 048359 140 DADVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPV 201 (325)
Q Consensus 140 ~~DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~ 201 (325)
..|+|||+.|-= + ...+ + -.+.|+..++.+++-|.+.. +.++|++-+..|.
T Consensus 244 ~pdlVvI~lGtN-D-~~~~--~-----~~~~~~~~l~~li~~ir~~~--P~a~Illv~p~~~ 294 (385)
T 3skv_A 244 PADLISLRVGTS-N-FMDG--D-----GFVDFPANLVGFVQIIRERH--PLTPIVLGSSVYS 294 (385)
T ss_dssp CCSEEEEEESHH-H-HTTT--C-----CTTTHHHHHHHHHHHHHTTC--SSSCEEEEECCCC
T ss_pred CCCEEEEEeecc-C-CCCC--C-----CHHHHHHHHHHHHHHHHHHC--CCCcEEEEcCCCC
Confidence 479999998831 0 0001 0 13457777777777776532 3567888776653
No 31
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=31.18 E-value=18 Score=34.13 Aligned_cols=130 Identities=12% Similarity=0.150 Sum_probs=66.8
Q ss_pred cEEEEccCccccccccCceeeecccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCCCCCCCCCCCCCCCCCccC
Q 048359 142 DVLVFNTGHWGCYFQEGAEVKIEMKVEHAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHFRGGDWRTGGSCHMETLPE 221 (325)
Q Consensus 142 DVlV~NtGhW~~~~~~g~~v~~~~~~~~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~GG~C~~~t~P~ 221 (325)
|+|||..|.=-..... ....+.|+..|+.+++.+.+. ..+|++-|..|.. ..|+..|.-.
T Consensus 232 d~VvI~~G~ND~~~~~-------~~~~~~~~~~l~~ii~~lr~~----~a~vilvtP~~~~---~~~~~~~~~~------ 291 (375)
T 2o14_A 232 DYFMLQLGINDTNPKH-------KESEAEFKEVMRDMIRQVKAK----GADVILSTPQGRA---TDFTSEGIHS------ 291 (375)
T ss_dssp CEEEEECCTGGGCGGG-------CCCHHHHHHHHHHHHHHHHTT----TCEEEEECCCCCT---TCBCTTSCBC------
T ss_pred CEEEEEEEccCCCccC-------CCCHHHHHHHHHHHHHHHHHC----CCEEEEECCCCcc---cccCcccchh------
Confidence 9999999975111110 012567888888888877643 3567776632221 1232211110
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhcCCCCceEEeeccchhhh--hhcC---CCCCCCCCCCCCCCCCCCCCcccccCCCcc
Q 048359 222 LGTSLVPPETWVQFKMVTDVLLANTSTWKFDVLNVTYMTAQ--RKDG---HSSLYYMGPKASPAPIHRQDCSHWCLPGVP 296 (325)
Q Consensus 222 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~rv~lLDIT~ls~~--R~Dg---Hps~y~~~~~~~~~~~~~~DC~HWCLPGv~ 296 (325)
. .. . ...+.++++.++ ..+.++|+..++.- .+.+ -...| ...|-+|----| -
T Consensus 292 -~--~~--~--~~~~~i~~lA~~----~~v~~iDl~~~~~~~~~~~g~~~~~~~~-----------~~~DgvHpn~~G-~ 348 (375)
T 2o14_A 292 -S--VN--R--WYRASILALAEE----EKTYLIDLNVLSSAYFTSIGPERTLGLY-----------MDGDTLHPNRAG-A 348 (375)
T ss_dssp -C--TT--S--TTHHHHHHHHHH----TTCEEECHHHHHHHHHHHHCHHHHHTTB-----------CTTCSSSBBHHH-H
T ss_pred -H--HH--H--HHHHHHHHHHHH----cCCeEEehHHHHHHHHHhcCcccchhhh-----------cCCCCCCCCHHH-H
Confidence 0 00 1 123344454433 46899999887632 1111 01112 024778865433 3
Q ss_pred hHHHHHHHHHHhcCcccc
Q 048359 297 DSWNELLYALFLKRKTTH 314 (325)
Q Consensus 297 D~WNelL~~~L~~~~~~~ 314 (325)
..|-+.|+..|.......
T Consensus 349 ~~~A~~i~~~L~~~~~~~ 366 (375)
T 2o14_A 349 DALARLAVQELKRQGIAG 366 (375)
T ss_dssp HHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHhcccch
Confidence 567777777776554433
No 32
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=30.20 E-value=25 Score=33.62 Aligned_cols=26 Identities=35% Similarity=0.374 Sum_probs=22.0
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
++|++|+||||-.+ |...||+-++..
T Consensus 178 l~glkva~vGD~~n-nva~Sl~~~~~~ 203 (365)
T 4amu_A 178 LKNKKIVFIGDYKN-NVGVSTMIGAAF 203 (365)
T ss_dssp CTTCEEEEESSTTS-HHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCc-chHHHHHHHHHH
Confidence 58999999999766 688999988863
No 33
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=29.19 E-value=17 Score=31.39 Aligned_cols=67 Identities=10% Similarity=0.131 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEEEEeccCCCCCCCCCCCCCCCCCCCccCCCCCCCCCchHHHHHHHHHHHHhcCCC
Q 048359 169 HAYRRSIETVVKWIHNEVNTSKTQVFFRTFAPVHFRGGDWRTGGSCHMETLPELGTSLVPPETWVQFKMVTDVLLANTST 248 (325)
Q Consensus 169 ~Ayr~al~t~~~wi~~~~~~~~~~vf~Rt~SP~Hf~~g~W~~GG~C~~~t~P~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 248 (325)
+.|+..|+.+++-+.+. ..++++-|..|.- .|.. |...+ + . . ...+.++++.++
T Consensus 108 ~~~~~~l~~~i~~~~~~----g~~vil~tp~p~~----~~~~-~~~~~-~--------~--~--~y~~~~~~vA~~---- 161 (233)
T 1k7c_A 108 LTFPAYLENAAKLFTAK----GAKVILSSQTPNN----PWET-GTFVN-S--------P--T--RFVEYAELAAEV---- 161 (233)
T ss_dssp EBHHHHHHHHHHHHHHT----TCEEEEECCCCCC----TTTT-SSCCC-C--------C--C--HHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHC----CCEEEEECCCCcc----ccCC-Ccccc-c--------h--H--HHHHHHHHHHHH----
Confidence 45777788877766542 3467776655532 2432 11111 0 1 1 123444555443
Q ss_pred CceEEeeccchhh
Q 048359 249 WKFDVLNVTYMTA 261 (325)
Q Consensus 249 ~rv~lLDIT~ls~ 261 (325)
..+.++|...++.
T Consensus 162 ~~v~~iD~~~~~~ 174 (233)
T 1k7c_A 162 AGVEYVDHWSYVD 174 (233)
T ss_dssp HTCEEECHHHHHH
T ss_pred hCCeEEecHHHHH
Confidence 3699999987764
No 34
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=28.86 E-value=30 Score=33.72 Aligned_cols=27 Identities=15% Similarity=0.367 Sum_probs=21.7
Q ss_pred hcCCcEEEEec---cchh--hHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGD---SIGR--NQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGD---Sl~R--nq~~SL~ClL~~ 66 (325)
++|++|++||| |.+| |...||+-+|..
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~ 217 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTR 217 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGG
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHH
Confidence 45889999997 4566 889999988874
No 35
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=27.14 E-value=30 Score=32.27 Aligned_cols=27 Identities=26% Similarity=0.209 Sum_probs=22.6
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|++|||-..-|...||+-++..
T Consensus 152 l~gl~va~vGD~~~~rva~Sl~~~~~~ 178 (310)
T 3csu_A 152 LDNLHVAMVGDLKYGRTVHSLTQALAK 178 (310)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 589999999996555799999988874
No 36
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=26.51 E-value=37 Score=31.43 Aligned_cols=27 Identities=22% Similarity=0.231 Sum_probs=22.6
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|++|||-..-|...||+-++..
T Consensus 147 l~gl~va~vGD~~~~rva~Sl~~~~~~ 173 (299)
T 1pg5_A 147 IDGLVFALLGDLKYARTVNSLLRILTR 173 (299)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGG
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 589999999997655799999988764
No 37
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=25.93 E-value=31 Score=32.82 Aligned_cols=24 Identities=17% Similarity=0.284 Sum_probs=20.4
Q ss_pred cCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 41 RNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 41 RgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
.|++|+||||- .|...||+-+|..
T Consensus 187 ~glkva~vGD~--~nva~Sl~~~l~~ 210 (353)
T 3sds_A 187 EGLKIAWVGDA--NNVLFDLAIAATK 210 (353)
T ss_dssp TTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCEEEEECCC--chHHHHHHHHHHH
Confidence 79999999997 3688899988864
No 38
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=25.60 E-value=32 Score=32.32 Aligned_cols=24 Identities=33% Similarity=0.412 Sum_probs=20.8
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhh
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLS 65 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~ 65 (325)
+.|++|+||||- -|...|++-++.
T Consensus 155 l~glkva~vGD~--~rva~Sl~~~~~ 178 (323)
T 3gd5_A 155 LAGLKLAYVGDG--NNVAHSLLLGCA 178 (323)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--CcHHHHHHHHHH
Confidence 589999999997 578899998875
No 39
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=25.31 E-value=34 Score=31.80 Aligned_cols=27 Identities=26% Similarity=0.305 Sum_probs=22.4
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|+||||-..-|...||+.++..
T Consensus 149 l~glkva~vGD~~~~rva~Sl~~~~~~ 175 (306)
T 4ekn_B 149 IDGIKIAFVGDLKYGRTVHSLVYALSL 175 (306)
T ss_dssp STTCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHh
Confidence 689999999996544799999988863
No 40
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=25.14 E-value=33 Score=32.50 Aligned_cols=25 Identities=28% Similarity=0.478 Sum_probs=21.1
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
++|++|+||||- -|...||+-++..
T Consensus 177 l~glkva~vGD~--~nva~Sl~~~~~~ 201 (340)
T 4ep1_A 177 FKGIKLAYVGDG--NNVCHSLLLASAK 201 (340)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--chhHHHHHHHHHH
Confidence 589999999995 4588999988863
No 41
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=24.89 E-value=33 Score=32.42 Aligned_cols=25 Identities=28% Similarity=0.380 Sum_probs=20.8
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|+||||- -|...||+.++..
T Consensus 173 l~glkva~vGD~--~rva~Sl~~~~~~ 197 (339)
T 4a8t_A 173 LEDCKVVFVGDA--TQVCFSLGLITTK 197 (339)
T ss_dssp GGGCEEEEESSC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--chhHHHHHHHHHH
Confidence 567899999997 5688999988863
No 42
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=23.31 E-value=37 Score=32.32 Aligned_cols=25 Identities=28% Similarity=0.380 Sum_probs=20.9
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|+||||- -|...||+.++..
T Consensus 151 l~glkva~vGD~--~rva~Sl~~~~~~ 175 (355)
T 4a8p_A 151 LEDCKVVFVGDA--TQVCFSLGLITTK 175 (355)
T ss_dssp GGGCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--chhHHHHHHHHHH
Confidence 567899999997 5688999988864
No 43
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=22.58 E-value=16 Score=27.02 Aligned_cols=15 Identities=60% Similarity=1.083 Sum_probs=11.4
Q ss_pred CcEEEEe-ccchhhHH
Q 048359 43 KRLVFAG-DSIGRNQW 57 (325)
Q Consensus 43 K~i~FVG-DSl~Rnq~ 57 (325)
.+++||| ||-+|-|+
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 3589999 88877664
No 44
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=22.40 E-value=62 Score=27.93 Aligned_cols=23 Identities=26% Similarity=0.232 Sum_probs=18.4
Q ss_pred CCcEEEEeccchhhHHHHHHHhh
Q 048359 42 NKRLVFAGDSIGRNQWESLLCML 64 (325)
Q Consensus 42 gK~i~FVGDSl~Rnq~~SL~ClL 64 (325)
.++++++|||.+-|--..+.-.+
T Consensus 95 ~~~i~l~G~SaGG~lA~~~a~~~ 117 (274)
T 2qru_A 95 NQSFGLCGRSAGGYLMLQLTKQL 117 (274)
T ss_dssp TCCEEEEEETHHHHHHHHHHHHH
T ss_pred CCcEEEEEECHHHHHHHHHHHHH
Confidence 67899999999998777666433
No 45
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=21.46 E-value=38 Score=31.72 Aligned_cols=25 Identities=24% Similarity=0.399 Sum_probs=20.0
Q ss_pred hcCCcEEEEeccchhhHHHHHHHhhhc
Q 048359 40 LRNKRLVFAGDSIGRNQWESLLCMLSS 66 (325)
Q Consensus 40 lRgK~i~FVGDSl~Rnq~~SL~ClL~~ 66 (325)
+.|++|++|||- + |...||+=++..
T Consensus 153 l~gl~va~vGD~-~-~va~Sl~~~~~~ 177 (321)
T 1oth_A 153 LKGLTLSWIGDG-N-NILHSIMMSAAK 177 (321)
T ss_dssp CTTCEEEEESCS-S-HHHHHHHTTTGG
T ss_pred cCCcEEEEECCc-h-hhHHHHHHHHHH
Confidence 579999999993 3 788898877663
Done!