BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048368
         (904 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6MHQ6|MEND_BDEBA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate
           synthase OS=Bdellovibrio bacteriovorus (strain ATCC
           15356 / DSM 50701 / NCIB 9529 / HD100) GN=menD PE=3 SV=1
          Length = 526

 Score = 37.7 bits (86), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 22/128 (17%)

Query: 397 YEYTEMEKVRNMSCLQKKPLRNSLEKYPDGFSQEMNFGISVKISGGKIAWGHALPIAVDD 456
           Y + E  KV      +   +R  L+KYPD   Q M + IS ++ G  +  G++LPI    
Sbjct: 319 YPHHENVKVNIEDAARATQIRQLLDKYPDS-EQGMIYAISKRMKGSSVYLGNSLPIR--- 374

Query: 457 QISPLSESFISWSSSSTTSSVESNISSSKPLN-ISYKIS-FRPYYYLKL------GGLES 508
                      W SSS+     + +++++  N I  +IS F  + + +L      G L +
Sbjct: 375 ----------EWDSSSSHDFPPARVAANRGANGIDGQISTFLGWAHPELENWCLVGDLTA 424

Query: 509 LFNISSSW 516
           L+++SS W
Sbjct: 425 LYDLSSLW 432


>sp|P81909|OR22A_DROME Odorant receptor 22a OS=Drosophila melanogaster GN=Or22a PE=1 SV=1
          Length = 397

 Score = 33.9 bits (76), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 580 RITSLRNKSDSLY--FEPLFVSATSYYRILERRSIWRMDLELL----MVLISKTLACIFV 633
           R  ++ N  D LY  F   FV     Y +LERR  WRM    +       IS    C F+
Sbjct: 135 RYVAMGNFFDILYHIFYSTFVVMNFPYFLLERRHAWRMYFPYIDSDEQFYISSIAEC-FL 193

Query: 634 VFQLLYVKKHRDVLPFISLLM 654
           + + +Y+    DV P IS+LM
Sbjct: 194 MTEAIYMDLCTDVCPLISMLM 214


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.136    0.417 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 332,342,955
Number of Sequences: 539616
Number of extensions: 13969431
Number of successful extensions: 31172
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 31166
Number of HSP's gapped (non-prelim): 10
length of query: 904
length of database: 191,569,459
effective HSP length: 127
effective length of query: 777
effective length of database: 123,038,227
effective search space: 95600702379
effective search space used: 95600702379
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)