BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048376
(221 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 103/254 (40%), Gaps = 50/254 (19%)
Query: 2 WKL------PLI-GNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEV 54
WKL PL+ G LH L +LP H L LT K GP+ L+LG ++++S + +E
Sbjct: 23 WKLRNLHLPPLVPGFLHLLQPNLPIHLL-SLTQKLGPVYRLRLGLQEVVVLNSKRTIEEA 81
Query: 55 MKTHDVVFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSELLSAK--------- 105
M V FA RP P +++S +DI Y WK +K+ S LL
Sbjct: 82 MIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVD 141
Query: 106 ----------RVQSFQSIREKSKIYSLMYGITSRAAFGNRSRDQ-EAFASVRGEITKLMS 154
RVQ+ + + + L I FGN+ AF ++ K
Sbjct: 142 QLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWD 201
Query: 155 GFNIA--DM------FPSVGLLQWLTGYKSQVEKLHQEADRIVKNIINEHKKRKATLKIC 206
++I DM FP+ GL + K +E D +V+ + HK+
Sbjct: 202 HWSIQILDMVPFLRFFPNPGLWR----LKQAIEN----RDHMVEKQLRRHKESMVA---- 249
Query: 207 KIGDDEDLVDVLLK 220
G D+ D +L+
Sbjct: 250 --GQWRDMTDYMLQ 261
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 4 LPLIGNLHQLA--GSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDVV 61
LPL+G+L L G + H+ L KYGP+ +++G +IV Q+AKEV+
Sbjct: 16 LPLVGSLPFLPRHGHM-HNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKD 74
Query: 62 FASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVS 99
F+ RP I S N + I F+ G W+ R++ ++
Sbjct: 75 FSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMA 112
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 39/225 (17%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P+ PLIGN + G H L +YG + ++LG P ++++ + + +
Sbjct: 14 PFAWPLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGS 72
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSELLS-------AKRVQSFQSI 113
FA RP F +++S R + F Y + WK R+ S + + +++V +
Sbjct: 73 AFADRPSFASFRVVS-GGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVL 131
Query: 114 REKSKIYSLMY--------------------GITSRAAFGNR-SRDQEAFA---SVRGEI 149
E ++ +L+ + S FG R S D F S E
Sbjct: 132 SEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEF 191
Query: 150 TKLMSGFNIADMFPSVGLLQWLTGYKSQVEKLHQEADRIVKNIIN 194
+ + ++ D+ P WL + + V + +E +++ +N N
Sbjct: 192 GRTVGAGSLVDVMP------WLQYFPNPVRTVFREFEQLNRNFSN 230
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P LP+IGN+ Q+ L +L+ YGP+ L G +++ +V KE +
Sbjct: 16 PTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGE 75
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F+ R HFP A+ + + IVFS G WK++R+ + L
Sbjct: 76 EFSGRGHFPLAERANRGF-GIVFS-NGKRWKEIRRFSLMTL 114
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
PW PLIG++ L G PH L ++ +YG ++ +++G P +++S ++ +
Sbjct: 16 PWGWPLIGHMLTL-GKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGD 74
Query: 61 VFASRPHFPPAQIISYNYRDIVFSP-YGDSWKQLRKICVSELLS 103
F RP +IS N + + FSP G W R++ + L S
Sbjct: 75 DFKGRPDLYTFTLIS-NGQSMSFSPDSGPVWAARRRLAQNGLKS 117
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P LP+IGN+ Q+ L +L+ YGP+ L G P +++ + KE +
Sbjct: 16 PTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGE 75
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F+ R FP A+ + + IVFS G WK++R+ + L
Sbjct: 76 EFSGRGIFPLAERANRGF-GIVFS-NGKKWKEIRRFSLMTL 114
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P LP+IGN+ Q+ L +L+ YGP+ L G P +++ + KE +
Sbjct: 14 PTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGE 73
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F+ R FP A+ + + IVFS G WK++R+ + L
Sbjct: 74 EFSGRGIFPLAERANRGF-GIVFS-NGKKWKEIRRFSLMTL 112
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 9 NLHQLAGS--LPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDVVFASRP 66
N++ LA S LPH +R + YG + L LG + ++++ V KE + +FA RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 67 HFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSELLSAKRVQ-SFQS-IREKSKIYS 121
P ++ ++ S YG W R++ V+ Q SF+S I E++K ++
Sbjct: 85 CLPLFMKMT-KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFN 140
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 25 LTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDVVFASRPHFPPAQIISYNYRD--IV 82
L ++G + LQL P ++++ +E + TH A RP P QI+ + R +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 83 FSPYGDSWKQLRKICVSEL 101
+ YG +W++ R+ VS L
Sbjct: 99 LARYGPAWREQRRFSVSTL 117
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 25 LTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDVVFASRPHFPPAQIISYNYRD--IV 82
L ++G + LQL P ++++ +E + TH A RP P QI+ + R +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 83 FSPYGDSWKQLRKICVSEL 101
+ YG +W++ R+ VS L
Sbjct: 99 LARYGPAWREQRRFSVSTL 117
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 9 NLHQLAGS--LPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDVVFASRP 66
N++ LA S LPH +R + YG + L LG + ++++ V KE + +FA RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 67 HFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSELLSAKRVQ-SFQS-IREKSKIYS 121
P ++ ++ S YG W R++ V+ Q SF+S I E++K ++
Sbjct: 85 CLPLFMKMT-KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFN 140
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 1 PWKLPLIGNLHQLA-GSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHD 59
P+ LP+IGNL QL ++P R L ++GP+ L +G +++ + KE + +
Sbjct: 15 PFPLPIIGNLFQLELKNIPKSFTR-LAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYK 73
Query: 60 VVFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F+ R P ++ R I+F+ G +WK +R+ ++ L
Sbjct: 74 DEFSGRGDLPAFH--AHRDRGIIFN-NGPTWKDIRRFSLTTL 112
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P P+IGN+ Q+ L + YGP+ + LG P +++ + KE +
Sbjct: 15 PTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGE 74
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
FA R P + +S I FS +WK++R+ + L
Sbjct: 75 EFAGRGSVPILEKVSKGL-GIAFS-NAKTWKEMRRFSLMTL 113
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P LP IGN QL ++ L ++ +YGP+ + LG +++ +E +
Sbjct: 15 PTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAE 74
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F+ R + Y +VFS G+ KQLR+ ++ L
Sbjct: 75 EFSGRGEQATFDWVFKGY-GVVFS-NGERAKQLRRFSIATL 113
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P LP IGN QL ++ L ++ +YGP+ + LG +++ +E +
Sbjct: 15 PTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAE 74
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F+ R + Y +VFS G+ KQLR+ ++ L
Sbjct: 75 EFSGRGEQATFDWVFKGY-GVVFS-NGERAKQLRRFSIATL 113
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P LP IGN QL ++ L ++ +YGP+ + LG +++ +E +
Sbjct: 15 PTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAE 74
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F+ R + Y +VFS G+ KQLR+ ++ L
Sbjct: 75 EFSGRGEQATFDWVFKGY-GVVFS-NGERAKQLRRFSIATL 113
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P LP IGN QL ++ L ++ +YGP+ + LG +++ +E +
Sbjct: 15 PTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAE 74
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F+ R + Y +VFS G+ KQLR+ ++ L
Sbjct: 75 EFSGRGEQATFDWVFKGY-GVVFS-NGERAKQLRRFSIATL 113
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P LP IGN QL ++ L ++ +YGP+ + LG +++ +E +
Sbjct: 15 PTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAE 74
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F+ R + Y +VFS G+ KQLR+ ++ L
Sbjct: 75 EFSGRGEQATFDWVFKGY-GVVFS-NGERAKQLRRFSIATL 113
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
PW PL+G++ L G PH L ++ +YG ++ +++G P +++S ++ +
Sbjct: 21 PWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGD 79
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F RP + +I+ + G W R++ + L
Sbjct: 80 DFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNAL 120
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 1 PWKLPLIGNLHQLAGSLPHHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDV 60
P LP IGN QL ++ L ++ +YGP+ + LG +++ KE +
Sbjct: 15 PTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAE 74
Query: 61 VFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKICVSEL 101
F+ R + Y + FS G+ KQLR+ ++ L
Sbjct: 75 EFSGRGEQATFDWLFKGY-GVAFS-NGERAKQLRRFSIATL 113
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 19 HHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDVVFASRPHFPP-AQIIS-- 75
HH + GP + + V A VS P + K+++ + DV +R H+P +++
Sbjct: 17 HHTEHRTLREGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTW 76
Query: 76 ----YNYRDIVFSPYGDSWKQLRKICVSELLSAKRVQSFQSIREKSKIYSLMYGITSRAA 131
+ + +F+ YG + ++LR++ V+ SA+RV + + + +++ G+ R A
Sbjct: 77 PLALWVAVENMFTAYGPNHRKLRRL-VAPAFSARRVDAM-----RPAVEAMVTGLVDRLA 130
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 19 HHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMKTHDVVFASRPHFPPAQIISYNY 78
H R + KYGP+ +LG + ++ + P+ + K + + R PP Y
Sbjct: 37 HFRHIENFQKYGPIYREKLGNLESVYIIHPEDVAHLFK-FEGSYPERYDIPPWLAYHRYY 95
Query: 79 RD---IVFSPYGDSWKQLRKICVSELLSAKRVQSF 110
+ ++F G +WK+ R + +E+++ + +++F
Sbjct: 96 QKPIGVLFKKSG-TWKKDRVVLNTEVMAPEAIKNF 129
>pdb|2OV8|A Chain A, Crystal Structure Of Stal
pdb|2OVB|A Chain A, Crystal Structure Of Stal-Sulfate Complex
pdb|2OVF|A Chain A, Crystal Structure Of Stal-Pap Complex
Length = 288
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 68 FPPAQIISYNYRDIVFSPYGDSWKQLR------KICVSELLSAKRVQSFQSIREKSKIYS 121
FP A +++ Y D+ P G+ WK + + V++ ++ ++ + + E+SK+
Sbjct: 171 FPNAAVLAVRYEDLRKDPEGELWKVVDFLELGGRDGVADAVANCTLERMREMEERSKLLG 230
Query: 122 L-MYGITSRAA 131
L G+ +R
Sbjct: 231 LETTGLMTRGG 241
>pdb|4EEC|A Chain A, Crystal Structure Of The Glycopeptide Antibiotic
Sulfotransferase Stal Complexed With A3p And
Desulfo-A47934.
pdb|4EEC|B Chain B, Crystal Structure Of The Glycopeptide Antibiotic
Sulfotransferase Stal Complexed With A3p And
Desulfo-A47934
Length = 286
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 68 FPPAQIISYNYRDIVFSPYGDSWKQLR------KICVSELLSAKRVQSFQSIREKSKIYS 121
FP A +++ Y D+ P G+ WK + + V++ ++ ++ + + E+SK+
Sbjct: 169 FPNAAVLAVRYEDLRKDPEGELWKVVDFLELGGRDGVADAVANCTLERMREMEERSKLLG 228
Query: 122 L-MYGITSRAA 131
L G+ +R
Sbjct: 229 LETTGLMTRGG 239
>pdb|3ERR|A Chain A, Microtubule Binding Domain From Mouse Cytoplasmic Dynein
As A Fusion With Seryl-Trna Synthetase
pdb|3ERR|B Chain B, Microtubule Binding Domain From Mouse Cytoplasmic Dynein
As A Fusion With Seryl-Trna Synthetase
Length = 536
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 31/161 (19%)
Query: 37 LGQVPAIIVSSPQVAKEVMKTHDVVFASRPHFPPAQIISYNYRDIVFSPYGDSWKQLRKI 96
L +V ++ + K + K H V S + P A ++ ++ WKQ+R I
Sbjct: 55 LDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESIALLLGESTTDWKQIRSI 114
Query: 97 CVSE-------LLSAKRVQSFQSIREKSKIY-----SLMYGITSRAAFGNRSRDQEAFAS 144
+ E SA+ + +IREK K S Y I +RA+ A
Sbjct: 115 IMRENFIPTIVNFSAEEISD--AIREKMKKNYMSNPSYNYEIVNRASLA-------AGPM 165
Query: 145 VRGEITKLMSGFNIADMFPSVGLLQWLTGYKSQVEKLHQEA 185
V+ I +L N ADM V L +++++KL +A
Sbjct: 166 VKWAIAQL----NYADMLKRVEPL------RNELQKLEDDA 196
>pdb|2ERX|A Chain A, Crystal Structure Of Diras2 In Complex With Gdp And
Inorganic Phosphate
pdb|2ERX|B Chain B, Crystal Structure Of Diras2 In Complex With Gdp And
Inorganic Phosphate
Length = 172
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 77 NYRDIVFSPYGDSWKQL----RKICVSELLSAKRVQSFQSIR----EKSKIYSLMYGITS 128
+R+ D+++Q+ + IC ++ F +++ K + L+Y ITS
Sbjct: 27 TFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITS 86
Query: 129 RAAFGNRSRDQEAFASVRGEITK--LMSGFNIADMFPSVGLLQ---------WLTGYKSQ 177
R + E ++G++ +M N D PS + W +
Sbjct: 87 RQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMET 146
Query: 178 VEKLHQEADRIVKNIINEHKKRKATL 203
KL+ + + ++N K+R +L
Sbjct: 147 SAKLNHNVKELFQELLNLEKRRTVSL 172
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 1 PWKLPLIGNLHQL--AGSLP--HHRLRDLTNKYGPLMLLQLGQVPAIIVSSPQVAKEVMK 56
P PL+G+L ++ G L H L + KYG + ++LG ++ + SP + + + +
Sbjct: 29 PTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYR 88
Query: 57 THDVVFASRPHFPPAQIISYNYRDIVFSPY------GDSWKQLR 94
T + R P + YRD Y G W+++R
Sbjct: 89 T-ESAHPQRLEIKPWKA----YRDHRNEAYGLMILEGQEWQRVR 127
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,389,644
Number of Sequences: 62578
Number of extensions: 230401
Number of successful extensions: 505
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 475
Number of HSP's gapped (non-prelim): 35
length of query: 221
length of database: 14,973,337
effective HSP length: 95
effective length of query: 126
effective length of database: 9,028,427
effective search space: 1137581802
effective search space used: 1137581802
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)