BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048384
(538 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UUH7|GYP7_SCHPO GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp7 PE=3 SV=1
Length = 743
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 305 RARRSAEAVGLKDYDHLEPCRIFHAARLVA-----ILEAYALYDPEIGYCQGMSDLLSPI 359
R R E ++D H +P F + IL Y YD E+GY QGMSDLL+PI
Sbjct: 481 RTDRQHEYFQIEDLPHPDPQSTFTGTNMNMEMMKDILLTYNEYDTELGYVQGMSDLLAPI 540
Query: 360 TAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAE 419
++ FW VG MK+ NF D+ G+ RQL + +I+ D L+ HLEK +
Sbjct: 541 YVTFNDNALTFWGMVGLMKRLHFNFLRDQSGMHRQLDTLRLLIEFMDPELFAHLEKTDSS 600
Query: 420 DCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTDDLLL 479
+ F +RM+++ F+RE +E L LW+V++ + + I +
Sbjct: 601 NLFCFFRMLLIYFKREFDWEVLLKLWDVLFTNYLSYDYHI-----------------FVA 643
Query: 480 YAIAASVLKRRKLIIEKYSSMDEILRECNSMAGQL 514
YAIA + R++++ + S+ DE+L+ N ++G+L
Sbjct: 644 YAIAE---RHREVLLNQTSAFDEVLKYFNELSGKL 675
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 69 RRKRKLPLSPQQWRSLFTSDGKFRDGGVKFLKKVRSRGVDPSIRVEVWPFLLGVYDLNST 128
R KR PLS +QW S+F + GK + + L + G+ PS+R EVWPFLL VY +ST
Sbjct: 374 RVKRDDPLSVEQWNSMFNAHGKLQVDVHRVLGIIFHGGIQPSLRKEVWPFLLSVYPWDST 433
Query: 129 KEEREIIRTQKRKEYEKLRRE 149
EER +I ++EY L+R+
Sbjct: 434 SEERRVIYLSLQEEYCTLKRK 454
>sp|P09379|GYP7_YARLI GTPase-activating protein GYP7 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GYP7 PE=3 SV=2
Length = 730
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 20/208 (9%)
Query: 328 HAARLVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLD 387
H +L +L Y ++ +GY QGMSDLLSP+ V+ +D AFW F FM++ N+ D
Sbjct: 495 HLIQLRDMLITYNQHNKNLGYVQGMSDLLSPLYVVLQDDTLAFWAFSAFMERMERNYLRD 554
Query: 388 EVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEV 447
+ G+R QL + +++ LY+HLEK ++ + FF +RM++V F+REL ++ L LWEV
Sbjct: 555 QSGMRNQLLCLDHLVQFMLPSLYKHLEKTESTNLFFFFRMLLVWFKRELLWDDVLRLWEV 614
Query: 448 MWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILREC 507
+W D + +L+ A + K + ++I+ + DEIL+
Sbjct: 615 LWTDYL--------------------SSQFVLFVCLAILDKHKDVMIDHLAGFDEILKYM 654
Query: 508 NSMAGQLDVWKLLDDAHDLVVTLHDKIE 535
N ++ +D+ +LL A L +E
Sbjct: 655 NELSMTIDLDELLVRAELLFYRFRRTVE 682
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%)
Query: 71 KRKLPLSPQQWRSLFTSDGKFRDGGVKFLKKVRSRGVDPSIRVEVWPFLLGVYDLNSTKE 130
+R+ +S +W + F +G+ + +++ G+ P++R E W FLLGVY +ST
Sbjct: 353 QRRNEVSLAEWNAFFDYNGRLIVTVNEVKERIFHGGLAPAVRPEGWLFLLGVYPWDSTAA 412
Query: 131 EREIIRTQKRKEYEKLRRE 149
ER+ + ++ R +Y +L++E
Sbjct: 413 ERKELVSKLRVDYNRLKKE 431
>sp|Q6FWI1|GYP7_CANGA GTPase-activating protein GYP7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GYP7 PE=3 SV=1
Length = 745
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Query: 331 RLVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVG 390
+L IL Y +++P +GY QGM+DLLSP+ +I ++ FWCF FM++ NF D+ G
Sbjct: 502 KLADILTTYNIFNPNLGYVQGMTDLLSPLYYIIRDEETTFWCFTNFMERMERNFLRDQSG 561
Query: 391 IRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWA 450
IR Q+ ++ + ++ L HL+K + D FF +RM++V F+RE +++ +WEV +
Sbjct: 562 IRDQMLALTDLCQLMLPRLSAHLQKCDSSDLFFCFRMLLVWFKREFNYDDIFNIWEVFFT 621
Query: 451 DQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILRECNSM 510
D + + L+ + A + K I+ + D++++ N +
Sbjct: 622 DFYSSQYQ--------------------LFFMLAILQKNSSPIVNNLQTFDQVIKYFNDL 661
Query: 511 AGQLDVWKLLDDAHDLVVTLH 531
+++ L+ + L + H
Sbjct: 662 NSKMNWRDLMVRSELLFIQFH 682
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 71 KRKLPLSPQQWRSLFTSDGKFRDGGVKFLKKVRSRGV-DPSIRVEVWPFLLGVYDLNSTK 129
+R P++ Q+W SLF S+G+ + + G+ D + R EVWPFLLGVY +S++
Sbjct: 355 ERNHPMTKQKWNSLFDSEGRLTVTVNEVKDYIFHGGLADDATRKEVWPFLLGVYPWDSSE 414
Query: 130 EEREIIRTQKRKEYEKLRRE 149
+ER+ +R EY +L+++
Sbjct: 415 DERKQLRKALHDEYMELKQK 434
>sp|Q6BU76|GYP7_DEBHA GTPase-activating protein GYP7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GYP7 PE=3 SV=2
Length = 757
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 20/208 (9%)
Query: 328 HAARLVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLD 387
H ++ IL Y ++ +GY QGM+DLLSP+ ++ FW FV FM + NF D
Sbjct: 516 HLFKMREILLTYNEHNVNLGYVQGMTDLLSPLYVTFQDESLTFWAFVNFMDRMERNFLRD 575
Query: 388 EVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEV 447
+ G++ Q+ ++++++ L++HLEK ++ D +F +RM++V F+RE + L LWE+
Sbjct: 576 QSGMKNQMLTLNELVQFMLPDLFKHLEKCESTDLYFFFRMLLVWFKREFEWSSVLSLWEI 635
Query: 448 MWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILREC 507
+W D + + L +A+A + ++I + S DE+L+
Sbjct: 636 LWTDYYSGQFH-------------------LFFALAV-LSDNERIIRQNLSRFDEVLKYM 675
Query: 508 NSMAGQLDVWKLLDDAHDLVVTLHDKIE 535
N ++ +++ LL A L + I+
Sbjct: 676 NDLSMNMNLNHLLIRAELLFLRFRRMID 703
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 68 SRRKRKLPLSPQQWRSLFTSDGKFRDGGVKFLKKVRSRGVDPSIRVEVWPFLLGVYDLNS 127
S+ R+ P+S +W LF G+ + ++ G++ IR E W FLL VY +S
Sbjct: 357 SKTSRRKPISKVEWEGLFDFSGRLIISIDEIKDRIFHGGLEDCIRGEAWLFLLNVYPWDS 416
Query: 128 TKEEREIIRTQKRKEYEKLR 147
+ EER+ +R + YE+++
Sbjct: 417 SAEERKTLRNSFQTAYEEIK 436
>sp|P48365|GYP7_YEAST GTPase-activating protein GYP7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP7 PE=1 SV=1
Length = 746
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 20/188 (10%)
Query: 328 HAARLVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLD 387
H L IL Y +Y+ +GY QGM+DLLSPI ++ E+ + FWCF FM NF D
Sbjct: 509 HLIHLQNILITYNVYNTNLGYVQGMTDLLSPIYVIMKEEWKTFWCFTHFMDIMERNFLRD 568
Query: 388 EVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEV 447
+ GI Q+ + +++++ L HL K + + FF +RM++V F+RE E + +WE
Sbjct: 569 QSGIHEQMLTLVELVQLMLPELSEHLNKCDSGNLFFCFRMLLVWFKREFEMEDIMHIWEN 628
Query: 448 MWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILREC 507
W + + L+ + A + K + I++ + D+IL+
Sbjct: 629 FWTFYYSSQ--------------------FQLFFMLAILQKNSQAILQHLNQFDQILKFF 668
Query: 508 NSMAGQLD 515
N + G+LD
Sbjct: 669 NELNGKLD 676
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 71 KRKLPLSPQQWRSLF-TSDGKFRDGGVKFLKKVRSRGV-DPSIRVEVWPFLLGVYDLNST 128
+R+ PL+ +W SL+ +DG+ R + + G+ + S+R +VW FLL +Y +S+
Sbjct: 348 QRQFPLTEAKWNSLWDENDGRLRVTVNEVKDFIFHGGLENDSLRGKVWGFLLEIYPWDSS 407
Query: 129 KEEREIIRTQKRKEYEKLR 147
++ER I EY++L+
Sbjct: 408 QDERVQIDQTLAAEYDQLK 426
>sp|Q8TC07|TBC15_HUMAN TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2
Length = 691
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 20/186 (10%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQ 394
IL Y +YD ++GY QGMSDLLSP+ V+ + +AFWCF +M + NF G++ Q
Sbjct: 439 ILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFEEQMQGMKTQ 498
Query: 395 LSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQAA 454
L +S ++++ DS +LE + +F +R +++ F+RE SF L LWEVMW +
Sbjct: 499 LIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMWTEL-- 556
Query: 455 IRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILRECNSMAGQL 514
P + L A + ++ I+EK+ +EIL+ N ++ ++
Sbjct: 557 ------------------PCTNFHLLLCCAILESEKQQIMEKHYGFNEILKHINELSMKI 598
Query: 515 DVWKLL 520
DV +L
Sbjct: 599 DVEDIL 604
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 71 KRKLPLSPQQWRSLFTSDGKFRDGGVKFLKKVRSRG-VDPSIRVEVWPFLLGVYDLNSTK 129
+R+ P+S ++W S+G+ + V +K++ RG + ++R + W FLLG + +STK
Sbjct: 312 QRREPVSLEEWTKNIDSEGRILN--VDNMKQMIFRGGLSHALRKQAWKFLLGYFPWDSTK 369
Query: 130 EEREIIRTQKRKEYEKLR 147
EER ++ QK EY +++
Sbjct: 370 EERTQLQKQKTDEYFRMK 387
>sp|Q9CXF4|TBC15_MOUSE TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1
Length = 671
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 20/196 (10%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQ 394
IL Y +YD ++GY QGMSDLLSP+ V+ + +AFWCF +M + NF G++ Q
Sbjct: 422 ILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFEEQMQGMKTQ 481
Query: 395 LSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQAA 454
L +S ++++ DS +LE + +F +R +++ F+RE SF L LWEVMW +
Sbjct: 482 LIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMWTEL-- 539
Query: 455 IRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILRECNSMAGQL 514
P + L A + ++ I+ K+ +EIL+ N ++ ++
Sbjct: 540 ------------------PCKNFHLLLCCAILESEKQQIMAKHYGFNEILKHINELSMKI 581
Query: 515 DVWKLLDDAHDLVVTL 530
DV +L A + + +
Sbjct: 582 DVEDILCKAEAISLQM 597
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 71 KRKLPLSPQQWRSLFTSDGKFRDGGVKFLK-KVRSRGVDPSIRVEVWPFLLGVYDLNSTK 129
+R+ P+S ++W +G+ V+ +K K+ G+ S+R + W FLLG + +STK
Sbjct: 295 QRREPVSLEEWNKSLDPEGRLV--AVESMKQKIFRGGLSHSLRKQAWKFLLGYFPWDSTK 352
Query: 130 EEREIIRTQKRKEYEKLR 147
EER ++ QK EY +++
Sbjct: 353 EERTQLQKQKTDEYFRMK 370
>sp|Q3MII6|TBC25_HUMAN TBC1 domain family member 25 OS=Homo sapiens GN=TBC1D25 PE=1 SV=2
Length = 688
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 284 AVRANSEWITYCPSQATVSEVRARRSAEA-VGLKDYDHLEPCRIFHAARLVAILEAYALY 342
A RAN E + + S +R R+ G +D HL R H +L YA+
Sbjct: 273 AQRANPEDLEFIRSTVLKDVLRTDRAHPYYAGPEDGPHL---RALHD-----LLTTYAVT 324
Query: 343 DPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQLSIVSKII 402
P++ YCQGMSDL SPI AV+ + AF CF G MK+ NF D + + + + ++
Sbjct: 325 HPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLL 384
Query: 403 KVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWA 450
+ D Y++L++ A+D FF YR +++ +RE +F+ L + EV W+
Sbjct: 385 RHADPDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWS 432
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 73 KLPLSPQQWRSLFTSDGKF-RDGGVKFLKKVRSRGVDPSIRVEVWPFLLGVYDLNSTKEE 131
K PLS ++ + +G+ R ++ ++ GV+PS+R VW +LL VY T E
Sbjct: 196 KPPLSDAEFHTYLNHEGQLSRPEELRL--RIYHGGVEPSLRKVVWRYLLNVYPDGLTGRE 253
Query: 132 REIIRTQKRKEYEKLRRE 149
R +K +EYE+L+ E
Sbjct: 254 RMDYMKRKSREYEQLKSE 271
>sp|A1A5B6|TBC25_MOUSE TBC1 domain family member 25 OS=Mus musculus GN=Tbc1d25 PE=1 SV=1
Length = 742
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 284 AVRANSEWITYCPSQATVSEVRARRSAEA-VGLKDYDHLEPCRIFHAARLVAILEAYALY 342
A R N E + + S +R R+ G +D HL R H +L YA+
Sbjct: 327 AQRVNPEDLEFIRSTVLKDVLRTDRAHPYYAGPEDGPHL---RALHD-----LLTTYAVT 378
Query: 343 DPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQLSIVSKII 402
P++ YCQGMSDL SPI AV+ + AF CF G MK+ NF D + + + + ++
Sbjct: 379 HPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLL 438
Query: 403 KVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWA 450
+ D Y++L++ A+D FF YR +++ +RE +F+ L + EV W+
Sbjct: 439 RHADPDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWS 486
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 73 KLPLSPQQWRSLFTSDGKF-RDGGVKFLKKVRSRGVDPSIRVEVWPFLLGVYDLNSTKEE 131
K PLS ++ + +G+ R ++ ++ GV+PS+R VW +LL VY T E
Sbjct: 250 KPPLSDAEFHTYLNHEGQLSRPEELRL--RIYHGGVEPSLRKVVWRYLLNVYPDGLTGRE 307
Query: 132 REIIRTQKRKEYEKLRRE 149
R +K +EYE+L+ E
Sbjct: 308 RMDYMKRKSREYEQLKSE 325
>sp|Q8BYH7|TBC17_MOUSE TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=2
Length = 645
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 20/192 (10%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQ 394
IL Y +Y ++GY QGMSDLLSPI V+ + +AFWCF GFM+ NF + ++RQ
Sbjct: 403 ILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDAFWCFCGFMELVHGNFEESQETMKRQ 462
Query: 395 LSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQAA 454
L + +++V D L L+ + F +R +++ F+RE F L LWEV+W
Sbjct: 463 LGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTG--- 519
Query: 455 IRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILRECNSMAGQL 514
P + LL A A ++R L++ + S +EIL+ N + +L
Sbjct: 520 ----------------LPGPNLHLLVACAILDMERDTLMLSGFGS-NEILKHINELTMKL 562
Query: 515 DVWKLLDDAHDL 526
V +L A L
Sbjct: 563 SVEDVLTRAEAL 574
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 71 KRKLPLSPQQWRSLFTSDGKFRDGGVKFLK-KVRSRGVDPSIRVEVWPFLLGVYDLNSTK 129
+R P++ ++W +G+ ++ V LK ++ S G+ P +R E W FLLG S+
Sbjct: 276 ERAPPVTEEEWNRYVGPEGRLQN--VPELKNRIFSGGLSPGLRREAWKFLLGYLSWESSA 333
Query: 130 EEREIIRTQKRKEYEKLR---------RECRRLLKRGNGSLKLKEISET 169
EE + +K EY +++ +E R L G SL +++S T
Sbjct: 334 EEHKAHVRKKTDEYFRMKLQWKSVSAEQERRNSLLHGYRSLIERDVSRT 382
>sp|Q9HA65|TBC17_HUMAN TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=1 SV=2
Length = 648
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQ 394
IL Y +Y ++GY QGMSDLLSPI VI + +AFWCF GFM+ + NF + ++RQ
Sbjct: 403 ILLTYCMYHFDLGYVQGMSDLLSPILYVIQNEVDAFWCFCGFMELVQGNFEESQETMKRQ 462
Query: 395 LSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQAA 454
L + +++V D L L+ + F +R +++ F+RE F L LWEV+W
Sbjct: 463 LGRLLLLLRVLDPLLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTG--- 519
Query: 455 IRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILRECNSMAGQL 514
P + LL A A ++R L++ + S +EIL+ N + +L
Sbjct: 520 ----------------LPGPNLHLLVACAILDMERDTLMLSGFGS-NEILKHINELTMKL 562
Query: 515 DVWKLLDDAHDL 526
V +L A L
Sbjct: 563 SVEDVLTRAEAL 574
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 71 KRKLPLSPQQWRSLFTSDGKFRDGGVKFLK-KVRSRGVDPSIRVEVWPFLLGVYDLNSTK 129
+R P++ ++W +G+ + V LK ++ S G+ PS+R E W FLLG T
Sbjct: 276 ERGPPVTEEEWARHVGPEGRLQQ--VPELKNRIFSGGLSPSLRREAWKFLLGYLSWEGTA 333
Query: 130 EEREIIRTQKRKEYEKLR---------RECRRLLKRGNGSLKLKEISET 169
EE + +K EY +++ +E R L G SL +++S T
Sbjct: 334 EEHKAHIRKKTDEYFRMKLQWKSVSPEQERRNSLLHGYRSLIERDVSRT 382
>sp|Q2NKQ1|SGSM1_HUMAN Small G protein signaling modulator 1 OS=Homo sapiens GN=SGSM1 PE=1
SV=2
Length = 1148
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 25/252 (9%)
Query: 287 ANSEWITYCPSQATVSEVRARRSAEAVGL--KDYDHLEPCRIFHAARLVAILEAYALYDP 344
+S +TY P + V R + V ++Y + P + +L I+ +Y
Sbjct: 917 VSSSGVTYSPELLDLYTVNLHRIEKDVQRCDRNYWYFTPANL---EKLRNIMCSYIWQHI 973
Query: 345 EIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQLSIVSKIIKV 404
EIGY QGM DLL+P+ ++ ++ AF CF MK+ NF + + + +I++
Sbjct: 974 EIGYVQGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNFP-HGGAMDTHFANMRSLIQI 1032
Query: 405 KDSHLYRHL-EKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQAAIRAGIGKSA 463
DS L+ + + +F YR ++ F+REL ++ +WE +WA + A
Sbjct: 1033 LDSELFELMHQNGDYTHFYFCYRWFLLDFKRELVYDDVFLVWETIWAAKHVSSA------ 1086
Query: 464 WSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILRECNSMAGQLDVWKLLDDA 523
+L+ A V R +I+E +I++ N MA + + ++L A
Sbjct: 1087 ------------HYVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAERHNTKQVLKLA 1134
Query: 524 HDLVVTLHDKIE 535
DLV + IE
Sbjct: 1135 RDLVYKVQTLIE 1146
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 97 KFLKKVRSRGVDPSIRVEVWPFLLGVYDLNSTKEEREIIRTQKRKEYEKLRRE 149
+ L+ + G+ P IR VWPFLLG Y T+ ER+ + Q Y + E
Sbjct: 608 ELLRLIYYGGIQPEIRKAVWPFLLGHYQFGMTETERKEVDEQIHACYAQTMAE 660
>sp|Q8TBP0|TBC16_HUMAN TBC1 domain family member 16 OS=Homo sapiens GN=TBC1D16 PE=2 SV=1
Length = 767
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 24/196 (12%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQ 394
IL YA+Y+P +GY QGMSDL++PI A + ++ + FWCFVG M+ + + +Q
Sbjct: 516 ILLNYAVYNPAVGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQNTIFVSSPRDEDMEKQ 575
Query: 395 LSIVSKIIKVKDSHLYRHLEKLQAED---CFFVYRMVVVLFRRELSFEQTLCLWEVMWAD 451
L + +++++ Y+HL L ED F +R +++ F+RE + L +WE WA
Sbjct: 576 LLYLRELLRLTHVRFYQHLVSL-GEDGLQMLFCHRWLLLCFKREFPEAEALRIWEACWAH 634
Query: 452 QAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILRECNSMA 511
TD L+ A V +IE+ + D++L ++A
Sbjct: 635 YQ--------------------TDYFHLFICVAIVAIYGDDVIEQQLATDQMLLHFGNLA 674
Query: 512 GQLDVWKLLDDAHDLV 527
++ +L A L+
Sbjct: 675 MHMNGELVLRKARSLL 690
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 97 KFLKKVRSRGVDPSIRVEVWPFLLGVYDLNSTKEEREIIRTQKRKEYEKLRRE 149
K K + G+D SIR EVWPFLL Y ST EERE +R QKRKEY +++++
Sbjct: 416 KLRKAIFFGGIDVSIRGEVWPFLLRYYSHESTSEEREALRLQKRKEYSEIQQK 468
>sp|Q8BPQ7|SGSM1_MOUSE Small G protein signaling modulator 1 OS=Mus musculus GN=Sgsm1 PE=2
SV=2
Length = 1093
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 27/257 (10%)
Query: 283 DAVRANSEWITYCPSQATVSEVRARRSAEAVGLKDYDHLEPCRIFHAA---RLVAILEAY 339
+A +S +TY P + V R + V D + F AA +L I+ +Y
Sbjct: 858 EASPVSSSGVTYSPELLDLYTVNLHRIEKDVQRCDRSYW----YFTAANLEKLRNIMCSY 913
Query: 340 ALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQLSIVS 399
EIGY QGM DLL+P+ ++ ++ AF CF MK+ NF + + +
Sbjct: 914 IWQHIEIGYVQGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNFP-HGGAMDTHFANMR 972
Query: 400 KIIKVKDSHLYRHL-EKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQAAIRAG 458
+I++ DS L+ + + +F YR ++ F+REL ++ +WE +WA + A
Sbjct: 973 SLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELVYDDVFSVWETIWAAKHVSSA- 1031
Query: 459 IGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILRECNSMAGQLDVWK 518
+L+ A V R +I+E +I++ N MA + + +
Sbjct: 1032 -----------------HYVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAERHNAKQ 1074
Query: 519 LLDDAHDLVVTLHDKIE 535
+L A DLV + IE
Sbjct: 1075 ILQLARDLVHKVQILIE 1091
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 97 KFLKKVRSRGVDPSIRVEVWPFLLGVYDLNSTKEEREIIRTQKRKEYEKLRRE 149
+ L+ + GV P IR VWPFLLG Y T+ ER+ + Q Y + E
Sbjct: 553 ELLRLIYYGGVQPEIRRAVWPFLLGHYQFGMTEMERKEVDEQIHACYAQTMSE 605
>sp|O43147|SGSM2_HUMAN Small G protein signaling modulator 2 OS=Homo sapiens GN=SGSM2 PE=1
SV=4
Length = 1006
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 331 RLVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVG 390
RL ++ +Y ++GY QGM DLL+P+ + D A+ CF MK+ NF +
Sbjct: 818 RLRDVMCSYVWEHLDVGYVQGMCDLLAPLLVTLDNDQLAYSCFSHLMKRMSQNFP-NGGA 876
Query: 391 IRRQLSIVSKIIKVKDSHLYRHL-EKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMW 449
+ + + +I++ DS L+ + + +F YR ++ F+REL +E +WEV+W
Sbjct: 877 MDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIW 936
Query: 450 ADQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILRECNS 509
A R ++ +L+ A V R++I + +I++ N
Sbjct: 937 A------------------ARHISSEHFVLFIALALVEAYREIIRDNNMDFTDIIKFFNE 978
Query: 510 MAGQLDVWKLLDDAHDLVVTLHDKIE 535
A D ++L A DLV + IE
Sbjct: 979 RAEHHDAQEILRIARDLVHKVQMLIE 1004
Score = 40.4 bits (93), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 96 VKFLKKVRSRGVDPSIRVEVWPFLLGVYDLNSTKEEREIIRTQKRKEYEKLRRE 149
++ L++V G++ IR +VWPFLLG Y +K+E E + Y+++ E
Sbjct: 556 LELLRQVYYGGIEHEIRKDVWPFLLGHYKFGMSKKEMEQVDAVVAARYQQVLAE 609
>sp|Q80U12|SGSM2_MOUSE Small G protein signaling modulator 2 OS=Mus musculus GN=Sgsm2 PE=2
SV=2
Length = 1005
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 20/198 (10%)
Query: 331 RLVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVG 390
RL I+ +Y ++GY QGM DLL+P+ ++ D A+ CF MK+ NF
Sbjct: 817 RLRDIMCSYVWEHLDMGYVQGMCDLLAPLLVILDNDQLAYSCFSHLMKRMGQNFP-SGGA 875
Query: 391 IRRQLSIVSKIIKVKDSHLYRHL-EKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMW 449
+ + + +I++ DS L+ + + +F YR ++ F+REL +E +WEV+W
Sbjct: 876 MDSHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIW 935
Query: 450 ADQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRKLIIEKYSSMDEILRECNS 509
A R ++ +L+ A V R++I + +I++ N
Sbjct: 936 A------------------ARRISSEHFVLFIALALVEAYREIIRDNNMDFTDIIKFFNE 977
Query: 510 MAGQLDVWKLLDDAHDLV 527
A + D ++L A DLV
Sbjct: 978 RAERHDAQEILRIARDLV 995
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 96 VKFLKKVRSRGVDPSIRVEVWPFLLGVYDLNSTKEEREIIRTQKRKEYEKLRRE 149
++ L++V GV+ IR +VWPFLLG Y +K+E E + T Y+++ E
Sbjct: 556 LELLRQVYYGGVEHEIRKDVWPFLLGHYKFGMSKKEMEQVDTAVAARYQQVLAE 609
>sp|Q755I4|GYP5_ASHGO GTPase-activating protein GYP5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GYP5
PE=3 SV=2
Length = 829
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKK--ARHNFRLDEV 389
L +L+AY+L+DPE+GY QGM+ + +P+ + E+ +AF + MK R F D
Sbjct: 428 LFNVLKAYSLFDPEVGYTQGMAFVTAPLLINVWEEADAFGLLIKLMKNYGLREFFLPDMP 487
Query: 390 GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMW 449
G++ +L ++++ LY HL +L + + + LF + L + +V++
Sbjct: 488 GLQLKLYEFDRLLEENSPQLYNHLIRLGIRSSMYATQWFLTLFAYKFPLGFVLRILDVIF 547
Query: 450 AD 451
+
Sbjct: 548 VE 549
>sp|Q9NVG8|TBC13_HUMAN TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3
Length = 400
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITED----------HEAFWCFVGFMKKARHNF 384
IL YA +P I Y QGM++++ P+ D + F+CF M + R NF
Sbjct: 214 ILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNF 273
Query: 385 --RLD--EVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQ 440
LD + GI ++ V +K KD LY L++ + FF +R + +L +E
Sbjct: 274 IKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPD 333
Query: 441 TLCLWEVMWAD 451
+ +W+ ++AD
Sbjct: 334 VIRIWDSLFAD 344
>sp|Q8R3D1|TBC13_MOUSE TBC1 domain family member 13 OS=Mus musculus GN=Tbc1d13 PE=2 SV=1
Length = 400
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITED----------HEAFWCFVGFMKKARHNF 384
IL YA +P I Y QGM++++ P+ D + F+CF M + R NF
Sbjct: 214 ILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNF 273
Query: 385 --RLD--EVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQ 440
LD + GI ++ V +K KD LY L++ + FF +R + +L +E
Sbjct: 274 IKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQSIKPQFFAFRWLTLLLSQEFLLPD 333
Query: 441 TLCLWEVMWAD 451
+ +W+ ++AD
Sbjct: 334 VIRIWDSLFAD 344
>sp|Q9URY3|YLOH_SCHPO TBC domain-containing protein C1952.17c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1952.17c PE=4
SV=4
Length = 619
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 16/143 (11%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDH----------EAFWCFVGFMKKARHNF 384
IL YA +P IGY QGM+++L+P+ V+ D +AF+ F M + R +
Sbjct: 255 ILFIYAKLNPGIGYVQGMNEILAPLYYVLATDPTYENYYLCECDAFFLFTQMMVQVRDLY 314
Query: 385 R--LD---EVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFE 439
LD + GI +S ++ +K D L+ +LE+ Q ++ +R L +E
Sbjct: 315 EKTLDHDSDHGIHFLMSKFTERLKKYDYELWENLEEKQIHPTYYSFRWFTCLLSQEFPLP 374
Query: 440 QTLCLWEVMWADQAAIRAGIGKS 462
+ LW+ + ADQ R GK+
Sbjct: 375 DVIRLWDSIIADQMKARL-FGKN 396
>sp|Q08484|GYP1_YEAST GTPase-activating protein GYP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP1 PE=1 SV=1
Length = 637
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 28/144 (19%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPI-----------------------TAVITE--- 365
L IL +A+ P GY QG++DL++P T ++ E
Sbjct: 360 LQRILYLWAIRHPASGYVQGINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTYMVDEQIT 419
Query: 366 DHEA--FWCFVGFMKKARHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFF 423
D EA FWC +++ N+ + GI RQ+ +S+++K D+ LY H + E F
Sbjct: 420 DLEADTFWCLTKLLEQITDNYIHGQPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQF 479
Query: 424 VYRMVVVLFRRELSFEQTLCLWEV 447
+R + L RE + +W+
Sbjct: 480 AFRWMNCLLMREFQMGTVIRMWDT 503
>sp|Q8IV04|TB10C_HUMAN Carabin OS=Homo sapiens GN=TBC1D10C PE=1 SV=1
Length = 446
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 22/140 (15%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVI---TEDHEAFWCFV--------GFMKKA 380
L+ +L+AY LY PE GYCQ P+ AV+ EAFWC V G+
Sbjct: 160 LLQVLKAYTLYRPEQGYCQAQ----GPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPH 215
Query: 381 RHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQ 440
RLD + +++ H+++HL+++ ++ + LF R L F
Sbjct: 216 MEAVRLDA-------EVFMALLRRLLPHVHKHLQQVGVGPLLYLPEWFLCLFARSLPFPT 268
Query: 441 TLCLWEVMWADQAAIRAGIG 460
L +W+ ++ A + +G
Sbjct: 269 VLRVWDAFLSEGARVLFRVG 288
>sp|Q8C9V1|TB10C_MOUSE Carabin OS=Mus musculus GN=Tbc1d10c PE=2 SV=1
Length = 444
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 22/140 (15%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVI---TEDHEAFWCFV--------GFMKKA 380
L+ +L+AY LY PE GYCQ P+ AV+ EAFWC V G+
Sbjct: 158 LLQVLKAYTLYRPEQGYCQAQ----GPVAAVLLMHLPPEEAFWCLVQICEVYLPGYYGPH 213
Query: 381 RHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQ 440
+LD + +++ + +Y+HL+++ ++ + LF R L F
Sbjct: 214 MEAVQLDA-------EVFMALLRRQLPRVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPT 266
Query: 441 TLCLWEVMWADQAAIRAGIG 460
L +W+ ++ A + +G
Sbjct: 267 VLRIWDAFLSEGAKVLFRVG 286
>sp|Q9NU19|TB22B_HUMAN TBC1 domain family member 22B OS=Homo sapiens GN=TBC1D22B PE=1 SV=3
Length = 505
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 45/224 (20%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDH-----------------------EAFW 371
IL +A+ P GY QG++DL++P V ++ ++FW
Sbjct: 294 ILFIWAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENFDVTNLSQDMLRSIEADSFW 353
Query: 372 CFVGFMKKARHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVL 431
C + + N+ + GI++++ + +++ D ++ H + + E F +R + L
Sbjct: 354 CMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQFAFRWMNNL 413
Query: 432 FRRELSFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRK 491
REL T+ LW+ ++ LY AA ++K RK
Sbjct: 414 LMRELPLRCTIRLWDTYQSEPEGF-------------------SHFHLYVCAAFLIKWRK 454
Query: 492 LII--EKYSSMDEILRECNSMA-GQLDVWKLLDDAHDLVVTLHD 532
I+ E + + +L+ ++ G ++ LL +A+ L D
Sbjct: 455 EILDEEDFQGLLMLLQNLPTIHWGNEEIGLLLAEAYRLKYMFAD 498
>sp|Q95LL3|TB22B_MACFA TBC1 domain family member 22B OS=Macaca fascicularis GN=TBC1D22B
PE=2 SV=1
Length = 505
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 45/224 (20%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDH-----------------------EAFW 371
IL +A+ P GY QG++DL++P V ++ ++FW
Sbjct: 294 ILFIWAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENFDVTNLSQDMLRSIEADSFW 353
Query: 372 CFVGFMKKARHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVL 431
C + + N+ + GI++++ + +++ D ++ H + + E F +R + L
Sbjct: 354 CMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQFAFRWMNNL 413
Query: 432 FRRELSFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRRK 491
REL T+ LW+ ++ LY AA ++K RK
Sbjct: 414 LMRELPLRCTIRLWDTYQSEPEGF-------------------SHFHLYVCAAFLIKWRK 454
Query: 492 LII--EKYSSMDEILRECNSMA-GQLDVWKLLDDAHDLVVTLHD 532
I+ E + + +L+ ++ G ++ LL +A+ L D
Sbjct: 455 EILDEEDFQGLLMLLQNLPTIHWGNEEIGLLLAEAYRLKYMFAD 498
>sp|O59737|GYP1_SCHPO GTPase-activating protein gyp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp1 PE=3 SV=1
Length = 514
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDH------------------------EAF 370
IL +A P GY QG+SDL++P V ++ +A+
Sbjct: 302 ILYVWASRHPASGYVQGISDLVTPFIQVFLSEYIGDKDPMTYDIALLDETNRNDIEADAY 361
Query: 371 WCFVGFMKKARHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVV 430
WC + + N+ + GIRRQ++ + ++ D L +HL+ + F +R +
Sbjct: 362 WCLSKLLDGIQDNYIHAQPGIRRQVNNLRELTLRIDEPLVKHLQMEGVDFLQFSFRWMNC 421
Query: 431 LFRRELSFEQTLCLWEVMWAD 451
L RELS + +W+ A+
Sbjct: 422 LLMRELSISNIIRMWDTYMAE 442
>sp|Q92738|US6NL_HUMAN USP6 N-terminal-like protein OS=Homo sapiens GN=USP6NL PE=1 SV=3
Length = 828
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFM---KKARHNFRLDE 388
L +L AY++Y+ E+GYCQGMS + + + + E+ +AFW V K A H F +
Sbjct: 169 LFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEE-DAFWALVKLFSGPKHAMHGFFVQ- 226
Query: 389 VGIRRQLSIV---SKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLW 445
G + L KI+ S L +HL+ + F+ + F F L +W
Sbjct: 227 -GFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIW 285
Query: 446 EV 447
++
Sbjct: 286 DI 287
>sp|Q80XC3|US6NL_MOUSE USP6 N-terminal-like protein OS=Mus musculus GN=Usp6nl PE=1 SV=2
Length = 819
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFM---KKARHNFRLDE 388
L +L AY++Y+ E+GYCQGMS + + + + E+ +AFW V K A H F +
Sbjct: 169 LFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEE-DAFWALVKLFSGPKHAMHGFFVQ- 226
Query: 389 VGIRRQLSIV---SKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLW 445
G + L KI+ S L +HL+ + F+ + F F L +W
Sbjct: 227 -GFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFRLNLRIW 285
Query: 446 EV 447
++
Sbjct: 286 DI 287
>sp|Q8R5A6|TB22A_MOUSE TBC1 domain family member 22A OS=Mus musculus GN=Tbc1d22a PE=2 SV=3
Length = 516
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 24/137 (17%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDH------------------------EAF 370
IL +A+ P GY QG++DL++P V ++ + +
Sbjct: 304 ILFIWAIRHPASGYVQGINDLVTPFFVVFICEYTDREDVDKVDVSSVPAEVLRNIEADTY 363
Query: 371 WCFVGFMKKARHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVV 430
WC + + N+ + GI+ ++ ++ +++ D ++RHL+ + F +R +
Sbjct: 364 WCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDERVHRHLDGHEVRYLQFAFRWMNN 423
Query: 431 LFRRELSFEQTLCLWEV 447
L REL T+ LW+
Sbjct: 424 LLMRELPLRCTIRLWDT 440
>sp|Q9BXI6|TB10A_HUMAN TBC1 domain family member 10A OS=Homo sapiens GN=TBC1D10A PE=1 SV=1
Length = 508
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVI---TEDHEAFWCFVGFMKKARHNFRLDE 388
L +L+AY LY PE GYCQ +PI AV+ +AFWC V +K + ++
Sbjct: 179 LFRVLKAYTLYRPEEGYCQAQ----APIAAVLLMHMPAEQAFWCLVQICEKYLPGYYSEK 234
Query: 389 V-GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEV 447
+ I+ I+ +++ ++HL + + + ++ + F R L + L +W++
Sbjct: 235 LEAIQLDGEILFSLLQKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDM 294
Query: 448 MWADQAAIRAGIG 460
+ + I +G
Sbjct: 295 FFCEGVKIIFRVG 307
>sp|Q8WUA7|TB22A_HUMAN TBC1 domain family member 22A OS=Homo sapiens GN=TBC1D22A PE=1 SV=2
Length = 517
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 61/137 (44%), Gaps = 24/137 (17%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDH------------------------EAF 370
IL +A+ P GY QG++DL++P V ++ + +
Sbjct: 305 ILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIEADTY 364
Query: 371 WCFVGFMKKARHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVV 430
WC + + N+ + GI+ ++ ++ +++ D ++RHL++ + F +R +
Sbjct: 365 WCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNN 424
Query: 431 LFRRELSFEQTLCLWEV 447
L RE+ T+ LW+
Sbjct: 425 LLMREVPLRCTIRLWDT 441
>sp|P58802|TB10A_MOUSE TBC1 domain family member 10A OS=Mus musculus GN=Tbc1d10a PE=1 SV=1
Length = 500
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVI---TEDHEAFWCFVGFMKKARHNFRLDE 388
L +L+AY LY PE GYCQ +PI AV+ +AFWC V +K + ++
Sbjct: 179 LFRVLKAYTLYRPEEGYCQAQ----APIAAVLLMHMPAEQAFWCLVQVCEKYLPGYYSEK 234
Query: 389 V-GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEV 447
+ I+ I+ +++ ++HL + + + ++ + F R L + L +W++
Sbjct: 235 LEAIQLDGEILFSLLQKVSPVAHKHLSRQKIDPLLYMTEWFMCAFARTLPWSSVLRVWDM 294
Query: 448 MWADQAAIRAGIG 460
+ + I +G
Sbjct: 295 FFCEGVKIIFRVG 307
>sp|Q95KI1|TB22A_MACFA TBC1 domain family member 22A (Fragment) OS=Macaca fascicularis
GN=TBC1D22A PE=2 SV=2
Length = 497
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 76/186 (40%), Gaps = 43/186 (23%)
Query: 335 ILEAYALYDPEIGYCQGMSDLLSPITAVITEDH------------------------EAF 370
IL +A+ P GY QG++DL++P V ++ + +
Sbjct: 285 ILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLRNIEADTY 344
Query: 371 WCFVGFMKKARHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVV 430
WC + + N+ + GI+ ++ ++ +++ D ++RHL++ + F +R +
Sbjct: 345 WCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNN 404
Query: 431 LFRRELSFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAASVLKRR 490
L RE+ T+ LW+ ++ LY AA +++ R
Sbjct: 405 LLMREVPLRCTIRLWDTYQSEPEGF-------------------SHFHLYVCAAFLVRWR 445
Query: 491 KLIIEK 496
K I+E+
Sbjct: 446 KEILEE 451
>sp|Q4KMP7|TB10B_HUMAN TBC1 domain family member 10B OS=Homo sapiens GN=TBC1D10B PE=1 SV=3
Length = 808
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVI---TEDHEAFWCFVGFMKKARHNFRLDE 388
L IL+AY +Y P+ GYCQ +P+ AV+ +AFWC V K +
Sbjct: 428 LYRILKAYTIYRPDEGYCQAQ----APVAAVLLMHMPAEQAFWCLVQICDKYLPGYYSAG 483
Query: 389 V-GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEV 447
+ I+ I +++ +RHL + + + ++ + +F R L + L +W++
Sbjct: 484 LEAIQLDGEIFFALLRRASPLAHRHLRRQRIDPVLYMTEWFMCIFARTLPWASVLRVWDM 543
Query: 448 MWADQAAI 455
+ + I
Sbjct: 544 FFCEGVKI 551
>sp|Q8BM85|TBCK_MOUSE TBC domain-containing protein kinase-like protein OS=Mus musculus
GN=Tbck PE=2 SV=1
Length = 762
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Query: 330 ARLVAILEAYALYDPEIGYCQGMSDLLSPITAV-ITEDHEAFWCFVGFMKKARHNFRLDE 388
A+ +L+A+ + P++ Y QG+ L +P + + A+ C F+ K +NF L +
Sbjct: 526 AKFRRVLKAWVVSHPDLVYWQGLDSLCAPFLYLNFNNEALAYACMSAFIPKYLYNFFLKD 585
Query: 389 VG--IRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWE 446
I+ L++ S++I D L HL ++ + + +F + LW+
Sbjct: 586 NSHVIQEYLTVFSQMIAFHDPELSNHLNEIGFIPDLYAIPWFLTMFTHVFPLHKIFHLWD 645
Query: 447 VMWADQAAIRAGIGKSAWSRIRQR 470
+ ++ IG + ++R R
Sbjct: 646 TLLLGNSSFPFCIGVAILQQLRDR 669
>sp|Q5F361|TBCK_CHICK TBC domain-containing protein kinase-like protein OS=Gallus gallus
GN=TBCK PE=2 SV=2
Length = 893
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Query: 330 ARLVAILEAYALYDPEIGYCQGMSDLLSPITAV-ITEDHEAFWCFVGFMKKARHNFRLDE 388
A+ +L+A+ + P++ Y QG+ L +P + + A+ C F+ K +NF L +
Sbjct: 526 AKFRRVLKAWVVSHPDLVYWQGLDSLCAPFLYLNFNNEALAYACMSAFIPKYLYNFFLKD 585
Query: 389 VG--IRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWE 446
I+ L++ S++I D L HL ++ + + +F + LW+
Sbjct: 586 NSHVIQEYLTVFSQMIAFHDPELSNHLNEIGFIPDLYAIPWFLTMFTHVFPLHKIFHLWD 645
Query: 447 VMWADQAAIRAGIGKSAWSRIRQR 470
+ ++ IG + ++R R
Sbjct: 646 TLLLGNSSFPFCIGVAILQQLRDR 669
>sp|Q8TEA7|TBCK_HUMAN TBC domain-containing protein kinase-like protein OS=Homo sapiens
GN=TBCK PE=2 SV=4
Length = 893
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Query: 330 ARLVAILEAYALYDPEIGYCQGMSDLLSPITAV-ITEDHEAFWCFVGFMKKARHNFRLDE 388
A+ +L+A+ + P++ Y QG+ L +P + + A+ C F+ K +NF L +
Sbjct: 526 AKFRRVLKAWVVSHPDLVYWQGLDSLCAPFLYLNFNNEALAYACMSAFIPKYLYNFFLKD 585
Query: 389 VG--IRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWE 446
I+ L++ S++I D L HL ++ + + +F + LW+
Sbjct: 586 NSHVIQEYLTVFSQMIAFHDPELSNHLNEIGFIPDLYAIPWFLTMFTHVFPLHKIFHLWD 645
Query: 447 VMWADQAAIRAGIGKSAWSRIRQR 470
+ ++ IG + ++R R
Sbjct: 646 TLLLGNSSFPFCIGVAILQQLRDR 669
>sp|Q8IYX1|TBC21_HUMAN TBC1 domain family member 21 OS=Homo sapiens GN=TBC1D21 PE=2 SV=1
Length = 336
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 331 RLVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVG 390
RL IL + + + Y QG +++ ++ DHE FW F F++K H+ ++ +G
Sbjct: 144 RLEKILLLSYVCNTQAEYQQGFHEMMMLFQLMVEHDHETFWLFQFFLQKTEHSCVIN-IG 202
Query: 391 IRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRREL-SFEQTLCLWEVMW 449
+ + L ++S +I D HL+ A ++ F+R SF+ LWEV+
Sbjct: 203 VAKNLDMLSTLITFLDPVFAEHLKGKGAGAVQSLFPWFCFCFQRAFKSFDDVWRLWEVLL 262
Query: 450 AD------QAAIRAGIGKSAWSRIRQRAPPTDDLLL 479
Q + + + ++ Q + DD+LL
Sbjct: 263 TGKPCRNFQVLVAYSMLQMVREQVLQESMGGDDILL 298
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 46 VTSSSPASCSSSDRTGRLKSPWSRRKRKLPLSPQQWRSLFTSDGKFRDGGVKFLKKVRSR 105
+T+ SP + S+ R + + KRK P+ +W S F G + R
Sbjct: 1 MTTLSPENSLSA----RQSASFILVKRKPPIDKTEWDSFFDESGHLAKSRDFICVNILER 56
Query: 106 GVDPSIRVEVWPFLLGVYDLNSTKEEREIIRTQKRKEYEKL 146
G+ P +R E W FL G + S+++ER + + +RK Y+ L
Sbjct: 57 GLHPFVRTEAWKFLTGYFSWQSSQDERLTVDSMRRKNYKAL 97
>sp|Q8BHL3|TB10B_MOUSE TBC1 domain family member 10B OS=Mus musculus GN=Tbc1d10b PE=1 SV=2
Length = 798
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVI---TEDHEAFWCFVGFMKKARHNFRLDE 388
L IL+AY +Y P+ GYCQ +P+ AV+ +AFWC V K +
Sbjct: 414 LYRILKAYTIYRPDEGYCQAQ----APVAAVLLMHMPAEQAFWCLVQICDKYLPGYYSAG 469
Query: 389 V-GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEV 447
+ I+ I +++ +RHL + + + ++ + +F R L + L +W++
Sbjct: 470 LEAIQLDGEIFFALLRRVSPLAHRHLRRQRIDPVLYMTEWFMCIFARTLPWASVLRVWDM 529
Query: 448 MWADQAAI 455
+ + I
Sbjct: 530 FFCEGVKI 537
>sp|Q12344|GYP5_YEAST GTPase-activating protein GYP5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP5 PE=1 SV=1
Length = 894
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEV-- 389
L +++ Y++YDP++GY QGM + +P+ + E+F VG MK N+ L E+
Sbjct: 508 LYKVIKVYSVYDPDVGYTQGMGFIAAPLLINCENEAESFGLLVGLMK----NYGLRELFL 563
Query: 390 ----GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLW 445
G+ L ++++ LY L + + + + F + E L ++
Sbjct: 564 PGMPGLMLMLYQFDRLLEEHSPSLYNRLIREGISSTMYATQWFLTFFAYKFPLEFVLRIF 623
Query: 446 EVMWAD 451
++++ +
Sbjct: 624 DIVFVE 629
>sp|Q6A039|TBC12_MOUSE TBC1 domain family member 12 OS=Mus musculus GN=Tbc1d12 PE=1 SV=2
Length = 696
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARH--NFRLDEV 389
L +IL AY Y P++GY QGMS ++ + + E+ +AF F + K FR+D
Sbjct: 492 LHSILGAYTCYRPDVGYVQGMS-FIAAVLILNLEEADAFIAFANLLNKPCQLAFFRVDHS 550
Query: 390 GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMW 449
+ + + + S L+ H + ++ + L+ + L + +W+V
Sbjct: 551 MMLKYFATFEVFFEENLSKLFLHFKSYNLTPDIYLIDWIFTLYSKSLPLDLACRVWDVFC 610
Query: 450 AD--QAAIRAGIG 460
D + R G+G
Sbjct: 611 RDGEEFLFRTGLG 623
>sp|O60347|TBC12_HUMAN TBC1 domain family member 12 OS=Homo sapiens GN=TBC1D12 PE=1 SV=3
Length = 775
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARH--NFRLDEV 389
L +IL AY Y P++GY QGMS ++ + + E+ +AF F + K FR+D
Sbjct: 571 LHSILGAYTCYRPDVGYVQGMS-FIAAVLILNLEEADAFIAFANLLNKPCQLAFFRVDHS 629
Query: 390 GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMW 449
+ + + + S L+ H + ++ + L+ + L + +W+V
Sbjct: 630 MMLKYFATFEVFFEENLSKLFLHFKSYSLTPDIYLIDWIFTLYSKSLPLDLACRVWDVFC 689
Query: 450 AD--QAAIRAGIG 460
D + R G+G
Sbjct: 690 RDGEEFLFRTGLG 702
>sp|Q60949|TBCD1_MOUSE TBC1 domain family member 1 OS=Mus musculus GN=Tbc1d1 PE=1 SV=3
Length = 1255
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWC--FVGFMKKARHNFRLDEV 389
L IL+AY+L D E+GYCQG+S ++ I + + EAF F+ F R +R D +
Sbjct: 960 LYNILKAYSLLDQEVGYCQGLS-FVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMI 1018
Query: 390 GIRRQLSIVSKIIKVKDSHLYRHLEK 415
++ Q+ +S+++ LY HLE+
Sbjct: 1019 ILQIQMYQLSRLLHDYHRDLYNHLEE 1044
>sp|Q86TI0|TBCD1_HUMAN TBC1 domain family member 1 OS=Homo sapiens GN=TBC1D1 PE=1 SV=2
Length = 1168
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWC--FVGFMKKARHNFRLDEV 389
L IL+AY+L D E+GYCQG+S ++ I + + EAF F+ F R +R D +
Sbjct: 873 LYNILKAYSLLDQEVGYCQGLS-FVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMI 931
Query: 390 GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLF 432
++ Q+ +S+++ LY HLE+ + + + +F
Sbjct: 932 ILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTMF 974
>sp|O97790|TBCD1_BOVIN TBC1 domain family member 1 OS=Bos taurus GN=TBC1D1 PE=2 SV=2
Length = 1165
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 323 PCRIFHAARLVA-------ILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAF--WCF 373
P +++A+L A IL+AY+L D E+GYCQG+S ++ I + + EAF F
Sbjct: 854 PTHPYYSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLS-FVAGILLLHMGEEEAFNMLKF 912
Query: 374 VGFMKKARHNFRLDEVGIRRQLSIVSKIIKVKDSHLYRHLEK 415
+ F R +R D + ++ Q+ +S+++ LY HLE+
Sbjct: 913 LMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEE 954
>sp|O60343|TBCD4_HUMAN TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2
Length = 1298
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWC--FVGFMKKARHNFRLDEV 389
L +L+AY+L D E+GYCQG+S ++ + + + +AF F+ + R +R D +
Sbjct: 991 LFNLLKAYSLLDKEVGYCQGIS-FVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMM 1049
Query: 390 GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMW 449
++ Q+ +S+++ LY HLE+ + + + LF + S ++++++
Sbjct: 1050 SLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFSLGFVARVFDIIF 1109
>sp|Q5TC63|GRTP1_HUMAN Growth hormone-regulated TBC protein 1 OS=Homo sapiens GN=GRTP1
PE=1 SV=4
Length = 336
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDE-VG 390
L +L AY ++ +GYCQGM+ + + + + E+FW + + ++ +G
Sbjct: 137 LYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDYYSPAMLG 196
Query: 391 IRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWA 450
++ ++ ++++ K + +E+L V R + LF L E L +W+ ++
Sbjct: 197 LKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFN 256
Query: 451 DQAAIRAGIGKSAWSRIRQRAPPTDDLLLYAIAA-------SVLKRRKLIIEKYSSMDEI 503
+ + I I + A + I+Q +L+L A + + + ++E ++ M +I
Sbjct: 257 EGSKI---IFRVALTLIKQH----QELILEATSVPDICDKFKQITKGSFVMECHTFMQKI 309
Query: 504 LRECNSMA 511
E S++
Sbjct: 310 FSEPGSLS 317
>sp|O95759|TBCD8_HUMAN TBC1 domain family member 8 OS=Homo sapiens GN=TBC1D8 PE=1 SV=3
Length = 1140
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 330 ARLVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHN-FRLDE 388
A L +L AYA +P+IGYCQ M ++L+ + + T++ EAFW V ++ + F
Sbjct: 571 AALRRVLTAYAHRNPKIGYCQSM-NILTSVLLLYTKEEEAFWLLVAVCERMLPDYFNHRV 629
Query: 389 VGIRRQLSIVSKIIKVKDSHLYRHLEKLQA 418
+G + S+ ++IK L H+ L A
Sbjct: 630 IGAQVDQSVFEELIKGHLPELAEHMNDLSA 659
>sp|Q8BYJ6|TBCD4_MOUSE TBC1 domain family member 4 OS=Mus musculus GN=Tbc1d4 PE=1 SV=2
Length = 1307
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 332 LVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWC--FVGFMKKARHNFRLDEV 389
L +L+AY+L D E+GYCQG+S ++ + + + +AF F+ + R +R D +
Sbjct: 1000 LFNLLKAYSLLDKEVGYCQGIS-FVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMM 1058
Query: 390 GIRRQLSIVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMW 449
++ Q+ +S+++ LY HLE+ + + + LF + ++++++
Sbjct: 1059 SLQIQMYQLSRLLHDYHRELYNHLEENEISPSLYAAPWFLTLFASQFPLGFVARVFDIIF 1118
>sp|D2H0G5|TBD2A_AILME TBC1 domain family member 2A OS=Ailuropoda melanoleuca GN=TBC1D2
PE=3 SV=1
Length = 923
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 331 RLVAILEAYALYDPEIGYCQGMSDLLSPITAVITEDHEAFWCFVGFMKKARHNFRLDEVG 390
+L +L A++ +P IGYCQG++ L + V+ E+ AFWC V ++ +
Sbjct: 700 KLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYSKTL 759
Query: 391 IRRQLS--IVSKIIKVKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVM 448
Q+ ++ ++ K L HL + + + F + +V+F L L +W+
Sbjct: 760 TSSQVDQRVLQDLLLEKLPRLMAHLGQYRVDLSFLTFNWFLVVFADSLISNILLRVWDAF 819
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,844,888
Number of Sequences: 539616
Number of extensions: 8293754
Number of successful extensions: 107079
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 402
Number of HSP's that attempted gapping in prelim test: 78604
Number of HSP's gapped (non-prelim): 18758
length of query: 538
length of database: 191,569,459
effective HSP length: 122
effective length of query: 416
effective length of database: 125,736,307
effective search space: 52306303712
effective search space used: 52306303712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)