AT5G09860 protein (Arabidopsis thaliana)

STRING 9.05

AT5G09860 protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	AT5G09860	nuclear matrix protein-related; nuclear matrix protein-related; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 266 Blast hits to 239 proteins in 102 species- Archae - 2; Bacteria - 0; Metazoa - 124; Fungi - 92; Plants - 23; Viruses - 0; Other Eukaryotes - 25 (source- NCBI BLink). (599 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G16790	unknown protein; EXPRESSED IN- shoot apex; CONTAINS InterPro DOMAIN/s- Tho complex subunit 7 (I [...] (233 aa)		•	•	0.991
	AT1G45233	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (452 aa)		•	•	0.991
	AT5G56130	transducin family protein / WD-40 repeat family protein; transducin family protein / WD-40 repe [...] (315 aa)	•		•	0.991
	AT1G24706	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (1804 aa)	•	•	•	0.983
	AT2G19430	transducin family protein / WD-40 repeat family protein; This gene is predicted to encode a pro [...] (367 aa)		•	•	0.982
	AT3G02950	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (236 aa)			•	0.958
	ATPDIL1-4	ATPDIL1-4 (PDI-LIKE 1-4); protein disulfide isomerase; Encodes a protein disulfide isomerase-li [...] (597 aa)	•			0.863
	AT5G42920	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (819 aa)			•	0.788

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: very high (>100%)

Permalink