Query 048388
Match_columns 477
No_of_seqs 234 out of 1005
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 15:39:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048388.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048388hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zx3_A Ectonucleoside triphosp 100.0 4.7E-89 1.6E-93 718.0 26.4 381 67-473 32-441 (452)
2 3cj1_A Ectonucleoside triphosp 100.0 2.2E-83 7.6E-88 678.4 28.1 380 67-474 32-447 (456)
3 3aap_A Ectonucleoside triphosp 100.0 1.1E-76 3.6E-81 609.9 27.8 346 69-466 3-352 (353)
4 4a57_A Nucleoside-triphosphata 100.0 2.2E-57 7.5E-62 475.6 15.6 387 67-470 38-588 (611)
5 1t6c_A Exopolyphosphatase; alp 99.8 2.6E-21 8.9E-26 195.7 12.4 276 66-436 10-291 (315)
6 3cer_A Possible exopolyphospha 99.8 2.1E-20 7.3E-25 191.1 12.5 286 67-433 15-306 (343)
7 3mdq_A Exopolyphosphatase; str 99.8 2.3E-19 7.8E-24 181.4 14.2 278 69-436 5-290 (315)
8 1u6z_A Exopolyphosphatase; alp 99.7 4.4E-18 1.5E-22 182.6 12.7 144 68-233 11-155 (513)
9 3hi0_A Putative exopolyphospha 99.7 4.2E-18 1.4E-22 182.5 12.1 146 67-235 14-160 (508)
10 3h1q_A Ethanolamine utilizatio 98.3 3.5E-06 1.2E-10 81.7 12.0 131 67-233 26-157 (272)
11 2ych_A Competence protein PILM 95.1 0.11 3.7E-06 52.2 11.0 56 70-132 14-72 (377)
12 4a2a_A Cell division protein F 92.7 0.63 2.1E-05 48.1 11.3 95 68-171 7-120 (419)
13 1jce_A ROD shape-determining p 92.7 0.92 3.2E-05 44.8 12.1 92 118-232 73-164 (344)
14 3qfu_A 78 kDa glucose-regulate 92.3 5.6 0.00019 39.6 17.5 93 118-232 130-223 (394)
15 4b9q_A Chaperone protein DNAK; 87.0 10 0.00034 40.8 15.2 94 118-233 112-206 (605)
16 1hux_A Activator of (R)-2-hydr 86.4 1.3 4.4E-05 42.8 7.0 109 70-232 4-113 (270)
17 4ehu_A Activator of 2-hydroxyi 85.6 4 0.00014 38.9 10.0 109 70-232 2-110 (276)
18 3ezw_A Glycerol kinase; glycer 83.0 1.8 6.2E-05 45.8 6.9 61 67-132 2-63 (526)
19 3qb0_A Actin-related protein 4 78.9 14 0.00049 38.9 12.0 65 145-233 116-180 (498)
20 3ll3_A Gluconate kinase; xylul 70.6 8.2 0.00028 40.5 7.5 63 68-135 3-66 (504)
21 4gni_A Putative heat shock pro 69.9 11 0.00037 37.9 8.0 95 118-232 127-222 (409)
22 3l0q_A Xylulose kinase; xlylul 68.6 6.1 0.00021 42.0 6.1 61 68-133 4-65 (554)
23 2v7y_A Chaperone protein DNAK; 61.8 26 0.00089 36.6 9.3 93 117-232 85-178 (509)
24 2p3r_A Glycerol kinase; glycer 59.1 13 0.00045 38.9 6.4 62 68-134 2-64 (510)
25 1dkg_D Molecular chaperone DNA 58.5 35 0.0012 33.6 9.2 94 117-232 111-205 (383)
26 3i33_A Heat shock-related 70 k 58.2 22 0.00076 35.4 7.7 95 118-232 135-231 (404)
27 3hz6_A Xylulokinase; xylulose, 57.1 14 0.00048 38.7 6.2 61 68-133 4-65 (511)
28 3h3n_X Glycerol kinase; ATP-bi 56.2 13 0.00043 39.0 5.6 60 68-133 4-65 (506)
29 3i8b_A Xylulose kinase; strain 53.6 24 0.00081 37.1 7.3 57 67-132 3-59 (515)
30 1yuw_A Heat shock cognate 71 k 53.2 30 0.001 36.6 8.1 94 118-232 116-210 (554)
31 3ifr_A Carbohydrate kinase, FG 52.3 20 0.00068 37.6 6.4 61 67-133 5-67 (508)
32 3g25_A Glycerol kinase; IDP007 50.7 14 0.00048 38.6 4.9 60 69-134 6-67 (501)
33 3h6e_A Carbohydrate kinase, FG 50.6 13 0.00043 38.9 4.5 61 68-133 5-65 (482)
34 2w40_A Glycerol kinase, putati 50.3 18 0.0006 37.8 5.6 59 68-132 3-63 (503)
35 3jvp_A Ribulokinase; PSI-II, N 49.2 36 0.0012 36.2 7.8 21 68-88 4-24 (572)
36 4e1j_A Glycerol kinase; struct 47.3 22 0.00074 37.4 5.7 60 69-134 26-87 (520)
37 2kho_A Heat shock protein 70; 46.0 43 0.0015 35.9 7.9 95 117-233 111-206 (605)
38 2uyt_A Rhamnulokinase; rhamnos 45.8 40 0.0014 34.8 7.5 63 68-134 3-69 (489)
39 2dpn_A Glycerol kinase; thermu 44.5 28 0.00097 36.1 6.1 61 69-134 2-63 (495)
40 2zf5_O Glycerol kinase; hypert 43.1 22 0.00074 37.0 4.9 61 69-134 3-64 (497)
41 4bc3_A Xylulose kinase; transf 41.3 15 0.0005 38.9 3.3 22 66-87 7-28 (538)
42 2itm_A Xylulose kinase, xylulo 39.9 31 0.0011 35.6 5.5 61 71-135 2-62 (484)
43 1zc6_A Probable N-acetylglucos 38.3 1E+02 0.0035 29.3 8.6 77 69-156 11-88 (305)
44 3d2f_A Heat shock protein homo 37.3 1E+02 0.0034 33.6 9.2 95 118-232 115-214 (675)
45 2d4w_A Glycerol kinase; alpha 37.2 30 0.001 36.1 4.8 60 69-134 2-63 (504)
46 2fxu_A Alpha-actin-1, actin, a 34.8 1E+02 0.0035 30.4 8.2 66 143-232 100-165 (375)
47 2ch5_A NAGK protein; transfera 33.4 1.8E+02 0.0062 27.9 9.6 91 70-173 7-98 (347)
48 2fsj_A Hypothetical protein TA 32.2 35 0.0012 33.7 4.1 19 215-233 190-208 (346)
49 2d0o_A DIOL dehydratase-reacti 25.4 34 0.0012 36.7 2.7 19 217-235 409-427 (610)
50 1nbw_A Glycerol dehydratase re 25.2 35 0.0012 36.7 2.8 19 217-235 411-429 (607)
51 4apw_A ALP12; actin-like prote 22.1 51 0.0017 32.3 3.2 20 214-233 171-190 (329)
52 1zbs_A Hypothetical protein PG 21.0 2.7E+02 0.0091 26.2 8.1 17 71-87 2-18 (291)
No 1
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=100.00 E-value=4.7e-89 Score=717.99 Aligned_cols=381 Identities=28% Similarity=0.476 Sum_probs=322.7
Q ss_pred CceEEEEEEcCCCccEEEEEEEeCCCC-ceecccccceEEee-cCCccccCCChHHHHHHHHHHHHHHHhhCCCCCCCCc
Q 048388 67 SKSYAVIFDAGSSGSRVHVYCFDQNLD-LVPIGKDLELFVQT-KPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKT 144 (477)
Q Consensus 67 ~~~y~vvIDaGSsgsRl~Vy~~~~~~~-l~~i~~~~e~~~k~-~pGLs~~~~~~~~~~~~l~~ll~~a~~~vp~~~~~~t 144 (477)
..+|+|||||||||||||||+|+.+.. ...+.++ ....++ +||||+|+.+|++++++|.+|+++|++.||.+.++.|
T Consensus 32 ~~~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~-~~~~k~~gpGlSs~~~~p~~~~~~l~~Ll~~a~~~vp~~~~~~t 110 (452)
T 3zx3_A 32 NVKYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQ-LEECQVKGPGISKYAQKTDEIAAYLAECMKMSTERIPASKQHQT 110 (452)
T ss_dssp CEEEEEEEEECSSCEEEEEEEEECCCTTCCCCCEE-EEEEECSSSCGGGGTTCGGGHHHHHHHHHHHHHHHSCHHHHTTC
T ss_pred CceEEEEEEcCCCCcEEEEEEEeCCcCCCccccce-eeeecccCCChhccCCCHHHHHHHHHHHHHHHHHhCCHHHcCCc
Confidence 578999999999999999999986321 1112222 245677 5999999999999999999999999999999999999
Q ss_pred cEEEEeehhhhcCCh---hhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEe
Q 048388 145 PVKVGATAGLRQLGV---DASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVD 221 (477)
Q Consensus 145 pi~l~ATAGmR~l~~---~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviD 221 (477)
||+++||||||+|+. +++++||++|++.++. ++|.|. +|+||||+|||+|+|+|+||++|+|..+..+|+|+||
T Consensus 111 pi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~-~~f~~~--~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lD 187 (452)
T 3zx3_A 111 PVYLGATAGMRLLRMESKQSADEVLAAVSRSLKS-YPFDFQ--GAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALD 187 (452)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHT-SSSEEE--EEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEE
T ss_pred cEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhh-CCCCCC--ceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEe
Confidence 999999999999983 5789999999999986 889885 7999999999999999999999999865557899999
Q ss_pred cCCCceeeEEeeccccccCCCCCCCCCCceeEEEEECCeEEEEEEeeeccccHHHHHHHHHh--hc----CCCCCCccCC
Q 048388 222 LGGGSVQMAYAISEKDAANAPTVPEGEDQYVNEMYLMGTKYYLYVHSYLHYGLLAARTEILK--VT----KDSDNPCILA 295 (477)
Q Consensus 222 lGGgStQiaf~~~~~~~~~~p~~~~~~~~~~~~~~l~g~~y~lY~hSyLgyG~~aar~~ilk--~~----~~~~~PC~~~ 295 (477)
||||||||+|.++.++. ..++ ...+++++|++|+||+|||||||+++||++++. ++ ....|||+|+
T Consensus 188 lGGgStQi~f~~~~~~~------~~~~--~~~~l~l~g~~y~lYthSyLgyG~~~Ar~r~l~~l~~~~~~~~~~~PC~p~ 259 (452)
T 3zx3_A 188 LGGASTQITFVPLNSTL------EAPE--TSLQFRLYGTDYTVYTHSFLCYGKDQALWQKLAQDIQVSSGGILKDPCFYP 259 (452)
T ss_dssp ECSSEEEEEECCSSCCS------SSGG--GEEEEEETTEEEEEEEEEEETCSHHHHHHHHHHHHCCTTSSSEEEETTSCT
T ss_pred cCCCceEEEeccCCCcc------CCCC--ceEEEEECCEEEEEEEEehhhccHHHHHHHHHHHHhcccCCCcccCCCCCC
Confidence 99999999999877432 1222 346899999999999999999999999999986 22 1246999999
Q ss_pred cccceeeeCC----------------ceeeccCCCCCCCHHhHHHHHHHhhhccCCCCCcccCCCCccCCCCCCCCCcce
Q 048388 296 GYDGSYKYGG----------------EEYKASASPSGSNIEECQSVAIKALKVNDTCTHMQCTFGGVWNGGGGDGQKNMF 359 (477)
Q Consensus 296 G~~~~~~~~g----------------~~~~~~~~~~~g~~~~C~~~i~~~L~~~~~C~~~~csf~gv~~~~~~~~~~~~y 359 (477)
||..++++++ ..+++.| +|||++|++.++++|+. .+|.+.+|+|+|+|||++ +++||
T Consensus 260 Gy~~~~~~~~~~~spc~~~~~~~~~~~~~~~~G---tg~~~~C~~~v~~ll~~-~~C~~~~CsfnGv~qP~~---~~~F~ 332 (452)
T 3zx3_A 260 GYKKVVNVSELYGTPCTKRFEKKLPFNQFQVQG---TGDYEQCHQSILKIFNN-SHCPYSQCAFNGVFLPPL---QGSFG 332 (452)
T ss_dssp TCEEEEEHHHHTTSGGGGGGCCCCSCSEEEEEE---CCCHHHHHHHHHTTSCC-SCCSSSSBSSTTCBCCCC---CSCEE
T ss_pred CCeeEEeecccccccccccccccCCCceeEEec---cCCHHHHHHHHHHHhcc-CcCCCCCcccCccccCCC---CCceE
Confidence 9999887532 3344444 89999999999999976 479999999999999964 57999
Q ss_pred EeeehhhhhhhcCccCCCCCCcccChHHHHHHHHHHccCChhhhhhhCCCCCCCCcccccccHHHHHHHhhcccCCCC--
Q 048388 360 VASFFFDRAAEAGFIDQNEPVAKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNLPYICMDLVYQHALLVVGFGLDP-- 437 (477)
Q Consensus 360 ~~S~f~~~~~~~g~~~~~~~~~~~~~~~~~~aa~~~C~~~~~~~~~~~p~~~~~~l~~~Cfd~~Y~~~LL~dGfgl~~-- 437 (477)
++|+|||++..+|++++ .+.+++.+|.++|+++|+++|+++++.+|++++++++++||+++||++||++||||++
T Consensus 333 a~S~fy~~~~~l~li~~---~~~~~l~~~~~~a~~~C~~~w~~~~~~~p~~~~~~l~~~Cf~~~yi~~LL~~Gyg~~~~~ 409 (452)
T 3zx3_A 333 AFSAFYFVMDFFKKMAN---DSVSSQEKMTEITKNFCSKPWEEVKASYPTVKEKYLSEYCFSGTYILSLLLQGYNFTGTS 409 (452)
T ss_dssp EEEHHHHHHHHHHHHC-------CCHHHHHHHHHHHHTSCHHHHHHHSTTSCHHHHTTHHHHHHHHHHHHHTTSCCCGGG
T ss_pred EEEEeeeehhhhCCCCC---CCccCHHHHHHHHHHHhcCcHHHHHhhCCCcchhHHHHHhhHHHHHHHHHhcccCCCCCc
Confidence 99999999999998642 2346999999999999999999999999998878899999999999999999999996
Q ss_pred CCceeEeeeeccCCCcccccccHHHHHHHhcccccc
Q 048388 438 WQEITLVKQIKYQNSLVEAAWPLGSAIEAISSLGLN 473 (477)
Q Consensus 438 ~~~I~~~~kI~~~~~~~e~~W~LGaal~~~s~~~~~ 473 (477)
+++|++++||+ ++|++||||+||+..+-.|.-
T Consensus 410 ~~~I~~~kkI~----~~e~~WtLGa~L~ltn~ip~e 441 (452)
T 3zx3_A 410 WDQIHFMGKIK----DSNAGWTLGYMLNLTNMIPAE 441 (452)
T ss_dssp GGGEEECSEET----TEECSSHHHHHHHHTTC----
T ss_pred ccceeeeeeeC----CcccchhHHHHHHHhccCCCC
Confidence 47999999999 489999999999988766543
No 2
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=100.00 E-value=2.2e-83 Score=678.41 Aligned_cols=380 Identities=27% Similarity=0.456 Sum_probs=324.2
Q ss_pred CceEEEEEEcCCCccEEEEEEEeCCC-CceecccccceEEee-cCCccccCCChHHHHHHHHHHHHHHHhhCCCCCCCCc
Q 048388 67 SKSYAVIFDAGSSGSRVHVYCFDQNL-DLVPIGKDLELFVQT-KPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKT 144 (477)
Q Consensus 67 ~~~y~vvIDaGSsgsRl~Vy~~~~~~-~l~~i~~~~e~~~k~-~pGLs~~~~~~~~~~~~l~~ll~~a~~~vp~~~~~~t 144 (477)
..+|+|||||||||+|||||+|+.+. ....+.++. ...++ +|||++|+.+|+++.++|.+|+++|++.||.+.++.|
T Consensus 32 ~~~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~-~~~~~~~~Gls~~~~~pe~~~~~l~~Ll~~a~~~iP~~~~~~t 110 (456)
T 3cj1_A 32 ALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQH-SSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHAST 110 (456)
T ss_dssp CEEEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEE-EEEECSSSCGGGGTTSTHHHHHHTHHHHHHHHHHSCHHHHTTC
T ss_pred CceEEEEEEcCCCCeEEEEEEEcCCCCCCccceeee-eeeeecccccccccCCHHHHHHHHHHHHHHHHHhCCHHHcCCc
Confidence 67899999999999999999998642 112222222 33467 8999999999999999999999999999999899999
Q ss_pred cEEEEeehhhhcCC---hhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCC---------C
Q 048388 145 PVKVGATAGLRQLG---VDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGK---------K 212 (477)
Q Consensus 145 pi~l~ATAGmR~l~---~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~---------~ 212 (477)
||+++||||||+++ ++|+++||++|++.++. ++|.+. +|+||||+|||+|+|+|+||++|+|.. +
T Consensus 111 ~v~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~-~~f~~~--~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~ 187 (456)
T 3cj1_A 111 PLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQ-YPFDFR--GARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRP 187 (456)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHTT-SSSEEE--EEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSS
T ss_pred eEEEEeeHHHhhCccccHHHHHHHHHHHHHHHhh-CCCCcC--ceEEcCchHHhhhhHHHHHhhhccccccccccccccc
Confidence 99999999999997 35899999999999985 787653 899999999999999999999998732 1
Q ss_pred CCceEEEEecCCCceeeEEeeccccccCCCCCCCCCCceeEEEEECCeEEEEEEeeeccccHHHHHHHHHh--hcCCCCC
Q 048388 213 YSNTVGVVDLGGGSVQMAYAISEKDAANAPTVPEGEDQYVNEMYLMGTKYYLYVHSYLHYGLLAARTEILK--VTKDSDN 290 (477)
Q Consensus 213 ~~~t~gviDlGGgStQiaf~~~~~~~~~~p~~~~~~~~~~~~~~l~g~~y~lY~hSyLgyG~~aar~~ilk--~~~~~~~ 290 (477)
..+++++||||||||||+|.++.+. ..+ ....+++++|++|+||+|||||||+++||.++++ ++....|
T Consensus 188 ~~~t~gvlDlGGgStqi~~~~~~~~-------~~~--~~~~~l~l~g~~y~lY~hS~LgyG~~~Ar~~~l~~l~~~~~~~ 258 (456)
T 3cj1_A 188 RKGTLGAMDLGGASTQITFETTSPS-------EDP--GNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQIHRFH 258 (456)
T ss_dssp CCCCCEEEEECSSEEEEEEECCSCC-------SCG--GGEEEEEETTEEEEEEEEEEETCSHHHHHHHHHHHHHHHTSSE
T ss_pred CCCceEEEEcCCCceEEEeccCCcc-------CCC--CceEEEEeCCeeEEEEEEecccchHHHHHHHHHHHHhcccCCC
Confidence 2467999999999999999976631 112 2346889999999999999999999999988876 2346789
Q ss_pred CccCCcccceeeeC------------------CceeeccCCCCCCCHHhHHHHHHHhhhccCCCCCcccCCCCccCCCCC
Q 048388 291 PCILAGYDGSYKYG------------------GEEYKASASPSGSNIEECQSVAIKALKVNDTCTHMQCTFGGVWNGGGG 352 (477)
Q Consensus 291 PC~~~G~~~~~~~~------------------g~~~~~~~~~~~g~~~~C~~~i~~~L~~~~~C~~~~csf~gv~~~~~~ 352 (477)
||+|+||..+++++ +..+++. |+|||++|+++++++|+.+ .|...+|+|+|+|||++
T Consensus 259 PC~p~G~~~~~~~~~~~~~~c~~~~~~~~y~~~~~~~~~---Gtg~~~~C~~~v~~ll~~~-~C~~~~Csf~gv~~P~~- 333 (456)
T 3cj1_A 259 PCWPKGYSTQVLLQEVYQSPCTMGQRPRAFNGSAIVSLS---GTSNATLCRDLVSRLFNIS-SCPFSQCSFNGVFQPPV- 333 (456)
T ss_dssp EEEEETCEEEEEHHHHHSSTTTTTC-------CCEEEEE---ECCCHHHHHHHHHTTCCCS-CCSSSSBSSTTCBCCCC-
T ss_pred CCcCCCCeeeeeecccccCcccccccccccCCCceeEee---cCCCHHHHHHHHHHHhccC-cCCCcccccCCccCCCC-
Confidence 99999999988753 1233433 4899999999999999765 69999999999999974
Q ss_pred CCCCcceEeeehhhhhhhcCccCCCCCCcccChHHHHHHHHHHccCChhhhhhhCCCCCCCCcccccccHHHHHHHhhcc
Q 048388 353 DGQKNMFVASFFFDRAAEAGFIDQNEPVAKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNLPYICMDLVYQHALLVVG 432 (477)
Q Consensus 353 ~~~~~~y~~S~f~~~~~~~g~~~~~~~~~~~~~~~~~~aa~~~C~~~~~~~~~~~p~~~~~~l~~~Cfd~~Y~~~LL~dG 432 (477)
+++||++|+|||++..+|+.+.. ...++.+|.++|+++|+++|+++++.+| .++++++++||+++||++||++|
T Consensus 334 --~~~f~a~S~fy~~~~~lgl~~~~---~~~~~~~~~~aa~~~C~~~w~~~~~~~p-~~~~~l~~~Cf~~~yi~~LL~~G 407 (456)
T 3cj1_A 334 --AGNFIAFSAFYYTVDFLTTVMGL---PVGTLKQLEEATEITCNQTWTELQARVP-GQKTRLADYCAVAMFIHQLLSRG 407 (456)
T ss_dssp --CSCEEEEHHHHHHHHHHHHTSCC---CCSSHHHHHHHHHHHHHCCHHHHHTTCC-SCCTTGGGHHHHHHHHHHHHHTT
T ss_pred --CCcEEEEEehHhhHHHhCCCCCC---CccCHHHHHHHHHHHhcCcHHHHhhhCC-cchhhHHHHhhHHHHHHHHHhcc
Confidence 47999999999999999987632 1456999999999999999999999999 77788999999999999999999
Q ss_pred cCCCC--CCceeEeeeeccCCCcccccccHHHHHHHhccccccc
Q 048388 433 FGLDP--WQEITLVKQIKYQNSLVEAAWPLGSAIEAISSLGLNQ 474 (477)
Q Consensus 433 fgl~~--~~~I~~~~kI~~~~~~~e~~W~LGaal~~~s~~~~~~ 474 (477)
|||++ +++|++++||+ ++|++||||+||+.++..|..+
T Consensus 408 ~g~~~~~~~~i~~~~kI~----~~e~~WtLGa~l~~~~~~p~~~ 447 (456)
T 3cj1_A 408 YHFDERSFREVVFQKKAA----DTAVGWALGYMLNLTNLIPADL 447 (456)
T ss_dssp SCCCHHHHTTEEECSEET----TEECSSHHHHHHHHTTCSCSSC
T ss_pred cCCCCCcccceEeeeeeC----CeeccchHHHHHHHhccCCccC
Confidence 99995 47999999998 4899999999999998877543
No 3
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=100.00 E-value=1.1e-76 Score=609.93 Aligned_cols=346 Identities=21% Similarity=0.355 Sum_probs=295.9
Q ss_pred eEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCCChHHHHHHHHHHHHHHHhhCCCCCCCCccEEE
Q 048388 69 SYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKV 148 (477)
Q Consensus 69 ~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~~~vp~~~~~~tpi~l 148 (477)
+|.+|||+||||+||+||+|+.+..+.++....+++.++.|||++|..+|+.+.+.|. +++. .+.++.|||++
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~~~~~~~~l~---~f~~----~~~~~~~~v~~ 75 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPNSVTIDAYLT---MLLA----DAPIHNIPVYF 75 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCSHHHHHHHHH---HHHT----TCSCCSEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCCHHHHHHHHH---HHHH----HHhcCCCcEEE
Confidence 5789999999999999999986533444433223347889999999999999988887 3333 46788999999
Q ss_pred EeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEecCCCcee
Q 048388 149 GATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQ 228 (477)
Q Consensus 149 ~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDlGGgStQ 228 (477)
+||||||+++.+++++||++|++.+++ ++| |.+.+|+||||+|||+|+|+|+||++++|..+..+|+++|||||||||
T Consensus 76 ~ATaa~R~a~n~~~~~~l~~v~~~~~~-~~~-~~g~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGSte 153 (353)
T 3aap_A 76 YATAGMRLLPQSQQKKYYDELEYWFRQ-QSQ-WQLVEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQ 153 (353)
T ss_dssp EECHHHHTSCHHHHHHHHHHHHHHHHT-CSS-EEEEEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEE
T ss_pred EecHHHhcCcHHHHHHHHHHHHHHHhh-CCC-CCCCeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceE
Confidence 999999999887899999999999986 777 777899999999999999999999999887544568999999999999
Q ss_pred eEEeeccccccCCCCCCCCCCceeEEEEECCeEEEEEEeeeccccHHHHHHHHHhhcCCCCCCccCCcccceeeeCCcee
Q 048388 229 MAYAISEKDAANAPTVPEGEDQYVNEMYLMGTKYYLYVHSYLHYGLLAARTEILKVTKDSDNPCILAGYDGSYKYGGEEY 308 (477)
Q Consensus 229 iaf~~~~~~~~~~p~~~~~~~~~~~~~~l~g~~y~lY~hSyLgyG~~aar~~ilk~~~~~~~PC~~~G~~~~~~~~g~~~ 308 (477)
|+|..++... + +..++.++.+++++|+||+|||||||+++||+++++ .|||+|+||. .++|
T Consensus 154 i~~~~~~~~~---~-----~~~~~~sl~lG~~~~~ly~~S~Lg~G~~~ar~~~~~-----~~PC~~~G~~---~~~g--- 214 (353)
T 3aap_A 154 IVFPMPKNAE---I-----SKHNQVELNIYGQNINLYVHSFLGLGQTEMSHQFLN-----SPSCFANDYP---LPDG--- 214 (353)
T ss_dssp EEEECCCCTT---S-----CGGGEEEEEETTEEEEEEEEEEETCSHHHHHTTTTT-----CGGGSCBTCB---CTTS---
T ss_pred EEEecCCccc---c-----CCCceEEEEECCcceeeeeecchhccHHHHHHHHhc-----CCCCCCCCCC---cccC---
Confidence 9998553110 1 113467899999999999999999999999999986 8999999999 2344
Q ss_pred eccCCCCCCCHHhHHHHHHHhhhccCCCCCcccCCCCccCCCC-CCCCCcceEeeehhhhh--hhcCccCCCCCCcccCh
Q 048388 309 KASASPSGSNIEECQSVAIKALKVNDTCTHMQCTFGGVWNGGG-GDGQKNMFVASFFFDRA--AEAGFIDQNEPVAKVRP 385 (477)
Q Consensus 309 ~~~~~~~~g~~~~C~~~i~~~L~~~~~C~~~~csf~gv~~~~~-~~~~~~~y~~S~f~~~~--~~~g~~~~~~~~~~~~~ 385 (477)
..|+|||++|+++++++|+ .+|+|+|+|||+. +.++++||++|+|||++ ..+|+. ..++++
T Consensus 215 ----~~g~g~~~~C~~~~~~ll~-------~~c~f~gv~~p~~~~~~~~~f~~~S~f~~~~~~~~~~l~-----~~~~~~ 278 (353)
T 3aap_A 215 ----ESGQGNAPSCKEEVTSLMN-------SVHKVNQQIQPLLALNPVNEWYSIGGISNLASSQLFHFE-----NSELTN 278 (353)
T ss_dssp ----CBCCCCHHHHHHHHHHHHH-------HTSCHHHHHHHHHHHSCCSEEEEEETHHHHHTSTTCCCC-----TTEEEH
T ss_pred ----ccCCCCHHHHHHHHHHHhc-------CccccCcccCCccccCCCCcEEEEEEEEeeechhhcCCC-----CCccCH
Confidence 2358999999999999995 4799999999974 34678999999999998 777774 246899
Q ss_pred HHHHHHHHH-HccCChhhhhhhCCCCCCCCcccccccHHHHHHHhhcccCCCCCCceeEeeeeccCCCcccccccHHHHH
Q 048388 386 GDFESAAKR-ACQTKLEDAKSIYPRVDESNLPYICMDLVYQHALLVVGFGLDPWQEITLVKQIKYQNSLVEAAWPLGSAI 464 (477)
Q Consensus 386 ~~~~~aa~~-~C~~~~~~~~~~~p~~~~~~l~~~Cfd~~Y~~~LL~dGfgl~~~~~I~~~~kI~~~~~~~e~~W~LGaal 464 (477)
.+|.++|++ +|+++|+++++.+|+ +++++++||+++||++||++||||+++++|++++ + ++|++||||+||
T Consensus 279 ~~~~~~a~~~~C~~~w~~~~~~~~~--~~~~~~~C~~~~yi~~lL~~G~g~~~~~~i~~~~--~----~~e~~W~LGa~l 350 (353)
T 3aap_A 279 QSLLQQGDNQICHQQWDILNGQYPD--DEYLYQYCLLSSYYYALMVDGYGINPNQTIHYIP--P----EQNLDWTIGVVL 350 (353)
T ss_dssp HHHHHHHHHHTTTSBHHHHHHHSTT--CTTGGGHHHHHHHHHHHHTTTTCCCTTSEEEECC--G----GGCCCTHHHHHH
T ss_pred HHHHHHHHhhhhCCcHHHHhhhcCc--chhHHHHhhhHHHHHHHHHhhcCCCCCceEEecC--C----CCCccchhhHHh
Confidence 999999999 999999999999985 4578999999999999999999999999999998 3 689999999999
Q ss_pred HH
Q 048388 465 EA 466 (477)
Q Consensus 465 ~~ 466 (477)
+.
T Consensus 351 ~~ 352 (353)
T 3aap_A 351 HR 352 (353)
T ss_dssp HH
T ss_pred cc
Confidence 75
No 4
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=100.00 E-value=2.2e-57 Score=475.59 Aligned_cols=387 Identities=22% Similarity=0.313 Sum_probs=276.5
Q ss_pred CceEEEEEEcCCCccEEEEEEEeCC---CCceecccccceEEeecC-------------CccccCC-----Ch-------
Q 048388 67 SKSYAVIFDAGSSGSRVHVYCFDQN---LDLVPIGKDLELFVQTKP-------------GLSAYAS-----DP------- 118 (477)
Q Consensus 67 ~~~y~vvIDaGSsgsRl~Vy~~~~~---~~l~~i~~~~e~~~k~~p-------------GLs~~~~-----~~------- 118 (477)
..+++||||+|||+||..||++... .....+..+ ...-+.+ +|+.|+. .|
T Consensus 38 ~~qa~v~id~gss~t~~~~f~~~t~~~p~~~r~vlp~--~~~~~~~g~~~~~~r~~le~wld~~a~~~wesr~~~s~~~~ 115 (611)
T 4a57_A 38 SLQALVVIDAGSSSTRTNVFLAKTRSCPNKGRSIDPD--SIQLIGAGKRFAGLRVVLEEWLDTYAGKDWESRPVDARLLF 115 (611)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEEEEEETTTEEEECGG--GCEEEEECCCBCCHHHHHHHHHHHHTCTTTTTSCCCGGGGG
T ss_pred cceEEEEEeCCCCCcceeeEEEeecCCCCcceeeCcc--hhhhhhCCcccccHHHHHHHHHHHhcCCCcccCccchHHHH
Confidence 5689999999999999999998641 111111111 1122222 2555554 11
Q ss_pred --------------HHHHHHHHHHHHHHHhhCCCCCCCC--ccEEEEeehhhhcCChhhHHHHHHHHHHHhhcc-----C
Q 048388 119 --------------QAAANSLASLLDKAQSVVPQDLRPK--TPVKVGATAGLRQLGVDASDRILQAVRDLLKYK-----S 177 (477)
Q Consensus 119 --------------~~~~~~l~~ll~~a~~~vp~~~~~~--tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~-----~ 177 (477)
....+.|.+||++|.+.||+++++. |||++.||||||+||.+++++||++||+.|+.. +
T Consensus 116 ~~~p~m~~~a~~~~~~l~~~I~pLLd~A~~~VPk~~~k~~~TPV~L~ATAGMRLLp~~kqd~IL~aVr~~L~~sp~~~gF 195 (611)
T 4a57_A 116 QYVPQMHEGAKKLMQLLEEDTVAILDSQLNEKQKVQVKALGIPVMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHGY 195 (611)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEEEECTTSTTCCTTHHHHHHHHHHHHHTSCCGGGCC
T ss_pred hhChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHcccCCCcEEEEeeeecccCCHHHHHHHHHHHHHHHhcCCcccCc
Confidence 1235789999999999999999988 999999999999999999999999999999973 3
Q ss_pred CcccCCCceEEccCCccchhhHHHHHHhhccCCCC--------------CCceEEEEecCCCceeeEEeeccccccCCCC
Q 048388 178 AFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKK--------------YSNTVGVVDLGGGSVQMAYAISEKDAANAPT 243 (477)
Q Consensus 178 ~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~--------------~~~t~gviDlGGgStQiaf~~~~~~~~~~p~ 243 (477)
+|.+.+++|+||||+|||+|+|+|+||++|+|+.+ ..+|+|+||||||||||+|+++++.. .|
T Consensus 196 ~F~~~~~~vrIIsG~EEGvYgWITvNYLLG~f~~~~~~~~~~~~~~~~~~~~TvG~LDLGGASTQIaF~p~~~~~--~P- 272 (611)
T 4a57_A 196 KFFTNPFWTRPITGAEEGLFAFITLNHLSRRLGEDPARCMIDEYGVKQCRNDLAGVVEVGGASAQIVFPLQEGTV--LP- 272 (611)
T ss_dssp CEECCTTTSEECCHHHHHHHHHHHHHHHTTCCSSSCSEEEECTTSCEEEECCCCEEEEECSSCEEEEEECCTTCC--CC-
T ss_pred ccccCCCceeecCCccceeeEeeehhhhhccccccccccccccccccCCCCceeEEEeeCCceEEEEeccCcccC--CC-
Confidence 57778899999999999999999999999999642 24789999999999999998776432 12
Q ss_pred CCCCCCceeEEEEECCeE--------EEEEEeeeccccHHHHHHHHHhh--c-------CCCCCCccCCcccceeeeCCc
Q 048388 244 VPEGEDQYVNEMYLMGTK--------YYLYVHSYLHYGLLAARTEILKV--T-------KDSDNPCILAGYDGSYKYGGE 306 (477)
Q Consensus 244 ~~~~~~~~~~~~~l~g~~--------y~lY~hSyLgyG~~aar~~ilk~--~-------~~~~~PC~~~G~~~~~~~~g~ 306 (477)
.+...++|++.+ |+||+|||||||+++||.++++. + ....|||+|+||+.+|++++.
T Consensus 273 ------~~~~~~~L~g~~~l~~~~~~Y~VYTHSfLGYGlnqAR~r~Lk~L~~~~~~~~~~~i~dPCLPkGY~~~~~~~g~ 346 (611)
T 4a57_A 273 ------SSVRAVNLQRERLLPERYPSADVVSVSFMQLGMASSAGLFLKELCSNDEFLQGGICSNPCLFKGFQQSCSAGEV 346 (611)
T ss_dssp ------TTSCCEETTTTTSSCTTSCCCEEEEEEEGGGSHHHHHHHHHHHHTTSTTTEETTEEEETTSCBTCEEESSSBCE
T ss_pred ------CcceEEEEcCcccccCCccceEEEEEechhhhHHHHHHHHHHHHhhccccCCCCcccCCCcCCCCceEEEECCE
Confidence 245567888875 99999999999999999999972 1 123599999999999998887
Q ss_pred eeeccCC-----------------------------------------------------------CCCCCHHhHHHHHH
Q 048388 307 EYKASAS-----------------------------------------------------------PSGSNIEECQSVAI 327 (477)
Q Consensus 307 ~~~~~~~-----------------------------------------------------------~~~g~~~~C~~~i~ 327 (477)
.|.+.|. .|||||++|.+.|.
T Consensus 347 ty~i~G~~~vd~~l~~N~L~P~at~C~~~n~~i~~k~~n~~~c~~~~i~p~~~l~~r~~i~~c~~ivgtgdf~~c~~~v~ 426 (611)
T 4a57_A 347 EVRPDGSASVNEDVRKNRLKPLATYCSVNNPEISFKVTNEMQCRENSIDPTKPLAERMKIENCSIIKGTGNFDKCVSQVE 426 (611)
T ss_dssp EECTTSCEEECCCGGGBTTHHHHHHSSTTCHHHHTSTTHHHHHHTTTCCTTSCHHHHHCCTTCCEEEECCCHHHHHHHHH
T ss_pred EEEeCCccccchhHhhccccchhhhhcccCHHHHhhhhhhhhhhhcCcCCCcCHHHHcCCCCceEEeecCCHHHHHHHHH
Confidence 7654421 16999999999999
Q ss_pred HhhhccC-C----CCCcccCCCCccCCC-CCCCCCcceEeeehhhh----hhhcCccCCCCCCcccChHHHHHHHHHHcc
Q 048388 328 KALKVND-T----CTHMQCTFGGVWNGG-GGDGQKNMFVASFFFDR----AAEAGFIDQNEPVAKVRPGDFESAAKRACQ 397 (477)
Q Consensus 328 ~~L~~~~-~----C~~~~csf~gv~~~~-~~~~~~~~y~~S~f~~~----~~~~g~~~~~~~~~~~~~~~~~~aa~~~C~ 397 (477)
.+|-... + -+...--|...-|-- --+....+++++.-... +..+|++..+.. -+..++.+||++||+
T Consensus 427 ~il~~p~~plpan~ea~s~gf~~~~qvf~~~s~~ap~~vtg~~~~~~i~~l~~~~~l~~~f~---g~~~~l~~aa~~fc~ 503 (611)
T 4a57_A 427 SILVAPKLPLPANIEAASSGFESVDQVFRFASSTAPMIVTGGGMLAAINTLKDHRLLRSDFS---GDVEELAEAAREFCS 503 (611)
T ss_dssp HHTTSCSSCCCCCCCTTCCCCCCHHHHHHHSCCCSCEEEECHHHHHHHHHHHHTTSSCTTCC---CCHHHHHHHHHHHHT
T ss_pred HHhcCCCCCCCccchhhccCCCCHHHHHhhhccCCCeEEechhHhhHHHHHHHcCCCcccCC---CcHHHHHHHHHHhhc
Confidence 9873211 1 111111232211100 01223456666444333 345788854433 345799999999999
Q ss_pred CChhhhhhh-----CCCC-CC----CCcccccccHHHHHHHhhc---ccCCCCCCceeEeeeeccCC--CcccccccHHH
Q 048388 398 TKLEDAKSI-----YPRV-DE----SNLPYICMDLVYQHALLVV---GFGLDPWQEITLVKQIKYQN--SLVEAAWPLGS 462 (477)
Q Consensus 398 ~~~~~~~~~-----~p~~-~~----~~l~~~Cfd~~Y~~~LL~d---Gfgl~~~~~I~~~~kI~~~~--~~~e~~W~LGa 462 (477)
.+. ..... -|+. .+ ...-..|-.++..++||.. |...| ..|.+.++|.+.+ ..-+++|++|+
T Consensus 504 ~p~-~~~~~g~~~~~~~~~~~~~l~~~~~~~c~~la~~~~ll~~~~~g~~~p--~~i~~~~~v~~~~g~~~~~~gw~~g~ 580 (611)
T 4a57_A 504 SEV-IIRTDGPVIQLPNARGEQKLNSLNFDLCKTMALTVSLLRHMAAGENQP--SFIKWEKSIAGPDGKPLADLGWQVGV 580 (611)
T ss_dssp CEE-EEETTEEEEECSTTCCEEECCTTTTTHHHHHHHHHHHHHHHHHSSSCC--SCEEECSCCCBTTBSCSSCSSSHHHH
T ss_pred Ccc-eecCCceeEEccccccceecccccHHHHHHHHHHHHHHHHHhccccCC--ceEEeeeeccCCCCCCccccCchHHH
Confidence 886 22211 2332 01 1123579999999999976 55544 4688888887622 23478999999
Q ss_pred HHHHhccc
Q 048388 463 AIEAISSL 470 (477)
Q Consensus 463 al~~~s~~ 470 (477)
.|..+...
T Consensus 581 il~~~~~~ 588 (611)
T 4a57_A 581 ILHHVLFT 588 (611)
T ss_dssp HHHHHTSH
T ss_pred HHHHHHhH
Confidence 99988654
No 5
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=99.85 E-value=2.6e-21 Score=195.67 Aligned_cols=276 Identities=17% Similarity=0.157 Sum_probs=183.6
Q ss_pred CCceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccC-CChHHHHHHHHHHHHHHHhhCCCCCCCCc
Q 048388 66 LSKSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYA-SDPQAAANSLASLLDKAQSVVPQDLRPKT 144 (477)
Q Consensus 66 ~~~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~-~~~~~~~~~l~~ll~~a~~~vp~~~~~~t 144 (477)
..++|+ +||+|||++|++||+++.. .+..+.+ .....+++.|+.... -+++.+.+.+..|.+++... +.++.+
T Consensus 10 ~~m~~a-~IDiGSns~rl~I~~~~~~-~~~~i~~-~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~---~~~~v~ 83 (315)
T 1t6c_A 10 PIMRVA-SIDIGSYSVRLTIAQIKDG-KLSIILE-RGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLI---DEFKVE 83 (315)
T ss_dssp CCEEEE-EEEECSSEEEEEEEEEETT-EEEEEEE-EEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH---HHTTCS
T ss_pred CCcEEE-EEEECcCcEEEEEEEEcCC-cEEEEee-eeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHH---HHCCCC
Confidence 345555 7999999999999999843 3333322 223456777775533 36777777777777766654 345678
Q ss_pred cEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEecCC
Q 048388 145 PVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGG 224 (477)
Q Consensus 145 pi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDlGG 224 (477)
+++++||++||. +.|+++|++.|++.++ + .|+||||+|||.|.|+|+.+.++ ...+..++||||
T Consensus 84 ~i~~vATsA~R~--A~N~~~fl~~v~~~~G----~-----~i~vIsg~eEA~l~~~gv~~~l~-----~~~~~lvvDIGG 147 (315)
T 1t6c_A 84 RVKAVATEAIRR--AKNAEEFLERVKREVG----L-----VVEVITPEQEGRYAYLAVAYSLK-----PEGEVCVVDQGG 147 (315)
T ss_dssp EEEEEECHHHHT--STTHHHHHHHHHHHTC----C-----CEEECCHHHHHHHHHHHHHHHTC-----CCSEEEEEEEET
T ss_pred eEEEEEcHHHHc--CcCHHHHHHHHHHHHC----C-----CEEEcCHHHHHHHHHHHHHhhcc-----cCCCEEEEEeCC
Confidence 999999999999 5799999999998754 5 89999999999999999999875 124688999999
Q ss_pred CceeeEEeeccccccCCCCCCCCCCceeEEEEECCeEEEEEEeeeccccHHHHHHHHHhhcCCCCCCccCCcccceeeeC
Q 048388 225 GSVQMAYAISEKDAANAPTVPEGEDQYVNEMYLMGTKYYLYVHSYLHYGLLAARTEILKVTKDSDNPCILAGYDGSYKYG 304 (477)
Q Consensus 225 gStQiaf~~~~~~~~~~p~~~~~~~~~~~~~~l~g~~y~lY~hSyLgyG~~aar~~ilk~~~~~~~PC~~~G~~~~~~~~ 304 (477)
|||||++.... . .++++| +-+|......+++..
T Consensus 148 GStEl~~~~~~--------------~------------~~~~~S-l~~G~v~l~e~~~~~-------------------- 180 (315)
T 1t6c_A 148 GSTEYVFGKGY--------------K------------VREVIS-LPIGIVNLTETFFKQ-------------------- 180 (315)
T ss_dssp TEEEEEEEETT--------------E------------EEEEEE-ECCCHHHHHHHHCCS--------------------
T ss_pred CcEEEEEEeCC--------------c------------eeeEEE-EeccHHHHHHHhccC--------------------
Confidence 99999997322 1 134556 458886665554420
Q ss_pred CceeeccCCCCCCCHHhHHHHHHHhhhccCCCCCcccCCCCccCCCCCCCCCcceEeeehhhhhhhcCccCCCC-----C
Q 048388 305 GEEYKASASPSGSNIEECQSVAIKALKVNDTCTHMQCTFGGVWNGGGGDGQKNMFVASFFFDRAAEAGFIDQNE-----P 379 (477)
Q Consensus 305 g~~~~~~~~~~~g~~~~C~~~i~~~L~~~~~C~~~~csf~gv~~~~~~~~~~~~y~~S~f~~~~~~~g~~~~~~-----~ 379 (477)
.+++...+...++.+++.|..- +.. . ..+++.|+-+-....+-.-...- .
T Consensus 181 -------~~~~~~~~~~~~~~i~~~l~~~---------~~~--------~-~~lig~gGt~~~la~~~~~~~~y~~~~v~ 235 (315)
T 1t6c_A 181 -------DPPTEEEVKRFFEFLEKELSKV---------KKP--------V-DTIVGLGGTITTLAALEYNVYPYDPQKVH 235 (315)
T ss_dssp -------SSCCHHHHHHHHHHHHHHHTTT---------CCC--------C-SEEEEESHHHHHHHHHHTTCCSCCHHHHT
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHH---------Hhh--------c-CEEEEECcHHHHHHHHHhhccCCCccccC
Confidence 0111234677777887777311 000 0 35788877764443331110000 1
Q ss_pred CcccChHHHHHHHHHHccCChhhhhhhCCCCCCCCcccccccHHHHHHHhhcccCCC
Q 048388 380 VAKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNLPYICMDLVYQHALLVVGFGLD 436 (477)
Q Consensus 380 ~~~~~~~~~~~aa~~~C~~~~~~~~~~~p~~~~~~l~~~Cfd~~Y~~~LL~dGfgl~ 436 (477)
+..++.++|.+..++.+.++.++...+.|.+++++....-.-++-+.+++ +-++++
T Consensus 236 g~~l~~~~l~~~~~~l~~~~~~er~~~~~gl~~~Rad~i~~g~~Il~~i~-~~~~~~ 291 (315)
T 1t6c_A 236 GKVLTYGQIKKWFDTFKEIPSEERSKRFRQVEDRRAKVILAGIGIFLKTL-EIFEKD 291 (315)
T ss_dssp TCEEEHHHHHHHHHHHTTSCHHHHHHHSTTSCGGGTTTHHHHHHHHHHHH-HHHTCS
T ss_pred CeEEcHHHHHHHHHHHHcCCHHHHHHhcCCCChhHHHHHHHHHHHHHHHH-HHcCcC
Confidence 13578999999999999999887723457776665554444444444444 556654
No 6
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=99.82 E-value=2.1e-20 Score=191.08 Aligned_cols=286 Identities=13% Similarity=0.141 Sum_probs=182.9
Q ss_pred CceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCC-ChHHHHHHHHHHHHHHHhhCCCCCCCCcc
Q 048388 67 SKSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYAS-DPQAAANSLASLLDKAQSVVPQDLRPKTP 145 (477)
Q Consensus 67 ~~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~-~~~~~~~~l~~ll~~a~~~vp~~~~~~tp 145 (477)
...| ++||+|||+.||.||+++.+..+..+.+ .....+++.|+..... +++.+.+.+..|.+++... +.++.+.
T Consensus 15 ~~~~-A~IDiGSNsiRL~I~~~~~~~~~~~i~~-~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~---~~~~v~~ 89 (343)
T 3cer_A 15 SVTV-AGIDCGTNSIRLKIARVDADGMHEVVPR-ILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVI---AEHPIDG 89 (343)
T ss_dssp CEEE-EEEEECSSCEEEEEEEEETTEEEEEEEE-EEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH---TTSCCSE
T ss_pred CCeE-EEEEcccceeEeEEEEEcCCCCEEEEEE-EEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHH---HHCCCCe
Confidence 3445 5899999999999999975422333322 2234567777765433 6777788888887777666 4567789
Q ss_pred EEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEecCCC
Q 048388 146 VKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGG 225 (477)
Q Consensus 146 i~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDlGGg 225 (477)
|+++||++||. +.|+++|++.|++.++ + .|+||||+|||.|.|+|+.+.+..+. ...+..++|||||
T Consensus 90 v~~vATsA~R~--A~N~~~fl~~v~~~tG----i-----~ieVIsG~eEA~l~~~gv~~~~~~~~--~~~~~lviDIGGG 156 (343)
T 3cer_A 90 LRFVATSATRD--AENREEFEDEIERILG----V-----RPEVIPGTEEADLSFLGATSVVNRDD--LPAPYLVVDLGGG 156 (343)
T ss_dssp EEEEECHHHHH--CTTHHHHHHHHHHHHS----S-----CCEECCHHHHHHHHHHHHHSSCCTTT--CCSSEEEEEECSS
T ss_pred EEEEecHHHHc--CcCHHHHHHHHHHHHC----C-----CEEEeCHHHHHHHHHHHHHhhCcccc--ccCCEEEEEeCCC
Confidence 99999999999 5799999999999866 4 89999999999999999988775311 1245789999999
Q ss_pred ceeeEEeeccccccCCCCCCCCCCceeEEEEECCeEEEEEEeeeccccHHHHHHHHHhhcCCCCCCccCCcccceeeeCC
Q 048388 226 SVQMAYAISEKDAANAPTVPEGEDQYVNEMYLMGTKYYLYVHSYLHYGLLAARTEILKVTKDSDNPCILAGYDGSYKYGG 305 (477)
Q Consensus 226 StQiaf~~~~~~~~~~p~~~~~~~~~~~~~~l~g~~y~lY~hSyLgyG~~aar~~ilk~~~~~~~PC~~~G~~~~~~~~g 305 (477)
||||++...... .|. + .. ++++|+ -+|.......++..
T Consensus 157 Stel~~~~~~~~---~~~---~--~~------------~~~~Sl-plG~v~lt~~~~~~--------------------- 194 (343)
T 3cer_A 157 STELVIGGDGVS---APT---T--QV------------QGAFSM-NIGSVRMTERHLTN--------------------- 194 (343)
T ss_dssp CEEEEECCCSSS---SCT---T--SC------------SEEEEE-SCCHHHHHHHTCCS---------------------
T ss_pred ceEEEEeecCcc---Ccc---c--cc------------ceeEEE-ehhHHHHHHHhccc---------------------
Confidence 999999744100 010 0 01 123333 37776655544320
Q ss_pred ceeeccCCCCCCCHHhHHHHHHHhhhccCCCCCcccCCCCccCCCCCCCCCcceEeeehhhhhhhcCccCCCCC-----C
Q 048388 306 EEYKASASPSGSNIEECQSVAIKALKVNDTCTHMQCTFGGVWNGGGGDGQKNMFVASFFFDRAAEAGFIDQNEP-----V 380 (477)
Q Consensus 306 ~~~~~~~~~~~g~~~~C~~~i~~~L~~~~~C~~~~csf~gv~~~~~~~~~~~~y~~S~f~~~~~~~g~~~~~~~-----~ 380 (477)
.+++...+...++.+++.|..- +.. +. + .+...+++.|+-+-....+-.-...-+ +
T Consensus 195 ------~~~~~~~~~~~~~~i~~~l~~~--~~~----~~--~-----~~~~~lvg~gGt~~~la~l~~~~~~y~~~~vhg 255 (343)
T 3cer_A 195 ------DPPTQTQIDEAVADVDEHIDEA--FRT----VD--A-----GKARTIIGVSGTVTTMTALAMGLKEYDHTVVDG 255 (343)
T ss_dssp ------SSCCHHHHHHHHHHHHHHHHHH--HTT----SC--G-----GGCSEEEEESHHHHHHHHHHTTCSSCCHHHHTT
T ss_pred ------CCCCHHHHHHHHHHHHHHHHHH--HHh----hh--h-----cCCcEEEEEchHHHHHHHHHhhcccCCccccCC
Confidence 0112245677777887776421 000 10 0 011368888887754433311100001 2
Q ss_pred cccChHHHHHHHHHHccCChhhhhhhCCCCCCCCcccccccHHHHHHHhhccc
Q 048388 381 AKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNLPYICMDLVYQHALLVVGF 433 (477)
Q Consensus 381 ~~~~~~~~~~aa~~~C~~~~~~~~~~~p~~~~~~l~~~Cfd~~Y~~~LL~dGf 433 (477)
..++.++|.+..++.+.++.++..+ .|.+++++....-.-++-+..++ +-+
T Consensus 256 ~~l~~~~l~~~~~~l~~~~~~er~~-~~gl~~~Radvi~~g~~Il~~i~-~~~ 306 (343)
T 3cer_A 256 HRLSFEDAYAVDDKFLRMTRAERRE-YKTIHPGRIDVVGGGAVVWSRVL-ARV 306 (343)
T ss_dssp CEEEHHHHHHHHHHHHSSCHHHHHT-CTTSCTTTTTTHHHHHHHHHHHH-HHH
T ss_pred eEEcHHHHHHHHHHHHcCCHHHHHh-cCCCChhHHHHHHHHHHHHHHHH-HHH
Confidence 3578999999999999999877654 47776666554444333333333 444
No 7
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=99.80 E-value=2.3e-19 Score=181.42 Aligned_cols=278 Identities=13% Similarity=0.098 Sum_probs=181.1
Q ss_pred eEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCC-ChHHHHHHHHHHHHHHHhhCCCCCCCCccEE
Q 048388 69 SYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYAS-DPQAAANSLASLLDKAQSVVPQDLRPKTPVK 147 (477)
Q Consensus 69 ~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~-~~~~~~~~l~~ll~~a~~~vp~~~~~~tpi~ 147 (477)
+| ++||+|||+.|+.|++.... .+..+. ......++..|+..... .++.+.+.+..|.+++... +.++.+.++
T Consensus 5 ~~-A~IDiGSNsirL~I~~~~~~-~~~~i~-~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~---~~~~v~~v~ 78 (315)
T 3mdq_A 5 RI-GVIDMGTNTFHLLITDIVND-RPHTLV-NEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVIL---DEHAVVHVI 78 (315)
T ss_dssp EE-EEEEECSSEEEEEEEEEETT-EEEEEE-EEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHH---HHTTCCEEE
T ss_pred eE-EEEEecCCcEEEEEEEEcCC-ceEEee-eceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHH---HHcCCCEEE
Confidence 45 57999999999999998862 333332 22244566777755433 6677777777776666554 345678899
Q ss_pred EEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEecCCCce
Q 048388 148 VGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGGSV 227 (477)
Q Consensus 148 l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDlGGgSt 227 (477)
++||++||. +.|+++|+++|++.++ + .|+||||+|||.|.|+|+.+.+.. ......++|||||||
T Consensus 79 ~vATsA~R~--A~N~~~fl~~i~~~tG----~-----~i~vIsG~eEA~l~~~gv~~~~~~----~~~~~lviDIGGGSt 143 (315)
T 3mdq_A 79 ATGTSAVRS--GSNKQVLIDRIKKEVN----I-----DVEVIDGAREAELIFRGVQQAVPM----EDHISLAMDIGGGSV 143 (315)
T ss_dssp EEECHHHHH--CTTHHHHHHHHHHHHC----C-----CEEECCHHHHHHHHHHHHHHHSCC----TTCCEEEEEECSSCE
T ss_pred EEeeHHHHc--CcCHHHHHHHHHHHHC----C-----CeEEeCHHHHHHHHHHHHHhcCCC----CCCCEEEEEeCCCce
Confidence 999999999 5799999999999766 4 899999999999999999887642 124578999999999
Q ss_pred eeEEeeccccccCCCCCCCCCCceeEEEEECCeEEEEEEeeeccccHHHHHHHHHhhcCCCCCCccCCcccceeeeCCce
Q 048388 228 QMAYAISEKDAANAPTVPEGEDQYVNEMYLMGTKYYLYVHSYLHYGLLAARTEILKVTKDSDNPCILAGYDGSYKYGGEE 307 (477)
Q Consensus 228 Qiaf~~~~~~~~~~p~~~~~~~~~~~~~~l~g~~y~lY~hSyLgyG~~aar~~ilk~~~~~~~PC~~~G~~~~~~~~g~~ 307 (477)
|+++.... . -++++|+ -+|......+++..
T Consensus 144 El~~~~~~--------------~------------~~~~~Sl-~lG~vrl~e~f~~~----------------------- 173 (315)
T 3mdq_A 144 EFIIGNKN--------------E------------ILWKQSF-EIGGQRLIDRFHVH----------------------- 173 (315)
T ss_dssp EEEEECSS--------------C------------EEEEEEE-SCCHHHHHHHSCCC-----------------------
T ss_pred EEEEEECC--------------e------------EeeeEEE-echhhHHHHHhccC-----------------------
Confidence 99997432 1 1334444 37775544433310
Q ss_pred eeccCCCCCCCHHhHHHHHHHhhhccCCCCCcccCCCCccCCCCCCCCCcceEeeehhhhhhhc--Cc----cCC-CCCC
Q 048388 308 YKASASPSGSNIEECQSVAIKALKVNDTCTHMQCTFGGVWNGGGGDGQKNMFVASFFFDRAAEA--GF----IDQ-NEPV 380 (477)
Q Consensus 308 ~~~~~~~~~g~~~~C~~~i~~~L~~~~~C~~~~csf~gv~~~~~~~~~~~~y~~S~f~~~~~~~--g~----~~~-~~~~ 380 (477)
.++....++++++.++..|..- +.. +.. .....+++.|.-+-....+ +. .++ .-..
T Consensus 174 ----~~~~~~~~~~~~~~i~~~l~~~--~~~----~~~-------~~~~~lig~gGt~~~la~~~~~~~~~~y~~~~~~~ 236 (315)
T 3mdq_A 174 ----DPMREDDRVMMHNYFDEVLVPL--EKA----INT-------WRPTQLIGCSGTFDTLAEMNIQHHREKIALEKQTS 236 (315)
T ss_dssp ----SSCCHHHHHHHHHHHHHHTHHH--HHH----HHH-------HCCCEEEEESHHHHHHHHHHHHHHTCCCCGGGCSE
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHH--HHH----Hhh-------cCCCEEEEEchHHHHHHHHHHhcccCCCCcccccC
Confidence 1112345778888887777421 000 000 0123678887766443322 11 011 1113
Q ss_pred cccChHHHHHHHHHHccCChhhhhhhCCCCCCCCcccccccHHHHHHHhhcccCCC
Q 048388 381 AKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNLPYICMDLVYQHALLVVGFGLD 436 (477)
Q Consensus 381 ~~~~~~~~~~aa~~~C~~~~~~~~~~~p~~~~~~l~~~Cfd~~Y~~~LL~dGfgl~ 436 (477)
..++.++|.+..++.++++.++..+ .|.+++++....-.-++-+.+++ +-++++
T Consensus 237 ~~i~~~~l~~~~~~l~~~~~~~r~~-~~gl~~~Rad~i~~g~~Il~~i~-~~~~~~ 290 (315)
T 3mdq_A 237 YLLSLPDFNRLRKQLVASTRRERLA-IAGMIELRADMVVVAICLIEHVL-KLVSTN 290 (315)
T ss_dssp EEEEHHHHHHHHHHHHHCCHHHHHT-STTCCHHHHHHHHHHHHHHHHHH-HHSCCS
T ss_pred cEEcHHHHHHHHHHHHcCCHHHHHh-cCCCChhHHHHHHHHHHHHHHHH-HHcCcC
Confidence 4689999999999999999877654 47776655554444444444444 556653
No 8
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=99.74 E-value=4.4e-18 Score=182.57 Aligned_cols=144 Identities=19% Similarity=0.267 Sum_probs=109.6
Q ss_pred ceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCC-ChHHHHHHHHHHHHHHHhhCCCCCCCCccE
Q 048388 68 KSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYAS-DPQAAANSLASLLDKAQSVVPQDLRPKTPV 146 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~-~~~~~~~~l~~ll~~a~~~vp~~~~~~tpi 146 (477)
..| ++||+|||+.|+.||+...+ .+..+.+ .....+++.|+..... +++.+.+.+..|-+++... ..++.+.|
T Consensus 11 ~~~-AaIDiGSNSirL~I~~~~~~-~~~~l~~-~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~---~~~~v~~v 84 (513)
T 1u6z_A 11 QEF-AAVDLGSNSFHMVIARVVDG-AMQIIGR-LKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERL---QGFSPASV 84 (513)
T ss_dssp -CE-EEEEECSSCEEEEEEEEETT-EEEEEEE-EEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHT---TTCCGGGE
T ss_pred CeE-EEEEeccccEEEEEEEEcCC-eeEEEEe-eEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHH---HhCCCCEE
Confidence 345 57999999999999999742 3333322 1233456666654333 5777777777777776665 45677899
Q ss_pred EEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEecCCCc
Q 048388 147 KVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGGS 226 (477)
Q Consensus 147 ~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDlGGgS 226 (477)
+++||++||. +.|+++|++.|++.+ ++ .|+||||+|||.|.|+|+...+.. .+...++||||||
T Consensus 85 ~~vATsA~R~--A~N~~~fl~~i~~~t----G~-----~i~vIsG~eEA~l~~~gv~~~~~~-----~~~~lviDIGGGS 148 (513)
T 1u6z_A 85 CIVGTHTLRQ--ALNATDFLKRAEKVI----PY-----PIEIISGNEEARLIFMGVEHTQPE-----KGRKLVIDIGGGS 148 (513)
T ss_dssp EEEECHHHHH--CTTHHHHHHHHTTTC----SS-----CEEECCHHHHHHHHHHHHHHHSCC-----CSCEEEEEECSSC
T ss_pred EEEecHHHHc--CcCHHHHHHHHHHHH----CC-----CEEEeCHHHHHHHHHHHHHhhccC-----CCCEEEEEECCCc
Confidence 9999999999 579999999999864 45 899999999999999999887642 1257899999999
Q ss_pred eeeEEee
Q 048388 227 VQMAYAI 233 (477)
Q Consensus 227 tQiaf~~ 233 (477)
||+++..
T Consensus 149 tEl~~~~ 155 (513)
T 1u6z_A 149 TELVIGE 155 (513)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999873
No 9
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=4.2e-18 Score=182.52 Aligned_cols=146 Identities=18% Similarity=0.190 Sum_probs=110.3
Q ss_pred CceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCC-ChHHHHHHHHHHHHHHHhhCCCCCCCCcc
Q 048388 67 SKSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYAS-DPQAAANSLASLLDKAQSVVPQDLRPKTP 145 (477)
Q Consensus 67 ~~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~-~~~~~~~~l~~ll~~a~~~vp~~~~~~tp 145 (477)
..+|+ +||+|||+.|+.||+...+ .+..+.+. ....+++.|+..... +++.+.+.+..|-.++... ..++.+.
T Consensus 14 ~~~~A-aIDiGSNS~rL~I~~~~~~-~~~~~~~~-k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~~---~~~~v~~ 87 (508)
T 3hi0_A 14 LAPVS-VIDIGSNSVRLVVYEGLSR-APAVLFNE-KVLCGLGKGLALTGRMHEEGVTRALMALRRFHVLS---EQAQAQK 87 (508)
T ss_dssp CCCEE-EEEECSSEEEEEEESCSSS-SCCEEEEE-EEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHH---HHTTCSE
T ss_pred CCeEE-EEEECCccEEEEEEEEcCC-CceEEEEE-eEEeecccCccccCCcCHHHHHHHHHHHHHHHHHH---HhCCCCe
Confidence 34555 7999999999999987643 23333221 133456666655433 6777777777777666554 3456678
Q ss_pred EEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEecCCC
Q 048388 146 VKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGG 225 (477)
Q Consensus 146 i~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDlGGg 225 (477)
|+++||++||. +.|+++|++.|++.++ + .|+||||+|||.|.|+|+...+.. ....++|||||
T Consensus 88 v~~vATsA~R~--A~N~~~fl~~i~~~tG----~-----~ievIsG~EEA~l~~~gv~~~~~~------~~~lvvDIGGG 150 (508)
T 3hi0_A 88 LYVLATAAARE--AENGPDFIREAEAILG----C-----EIEVLSGEKEALYSAYGVISGFYQ------PDGIAGDLGGG 150 (508)
T ss_dssp EEEEECTHHHH--STTHHHHHHHHHHHHT----S-----CEEECCHHHHHHHHHHHHHHHSSS------CEEEEEEECSS
T ss_pred EEEEeeHHHHc--CcCHHHHHHHHHHHHC----C-----CeEEecHHHHHHHHHHHHHhcCCC------CCeEEEEeCCC
Confidence 99999999999 5799999999999766 4 899999999999999999877531 24589999999
Q ss_pred ceeeEEeecc
Q 048388 226 SVQMAYAISE 235 (477)
Q Consensus 226 StQiaf~~~~ 235 (477)
|||+++....
T Consensus 151 StEl~~~~~~ 160 (508)
T 3hi0_A 151 SLELIDIKDK 160 (508)
T ss_dssp CEEEEEEETT
T ss_pred ceEEEEeeCC
Confidence 9999998543
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.31 E-value=3.5e-06 Score=81.70 Aligned_cols=131 Identities=18% Similarity=0.092 Sum_probs=79.8
Q ss_pred CceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCcccc-CCChHHHHHHHHHHHHHHHhhCCCCCCCCcc
Q 048388 67 SKSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAY-ASDPQAAANSLASLLDKAQSVVPQDLRPKTP 145 (477)
Q Consensus 67 ~~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~-~~~~~~~~~~l~~ll~~a~~~vp~~~~~~tp 145 (477)
..+|.++||+|||++|+.|+ +.+...+.. ......++..- ..+.+.+.+.+..+++.+....+.. . +
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~--~~~~~~l~~------~~~~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~---~-~ 93 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVT--DQEGIPVAG------ALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSE---L-F 93 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEE--CTTCCEEEE------EEEECCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSC---C-C
T ss_pred CCCEEEEEEcccceEEEEEE--CCCCcEEEE------EeecccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCc---c-C
Confidence 34678899999999999995 333232221 11112233322 2366788888999998888775432 1 1
Q ss_pred EEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEecCCC
Q 048388 146 VKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGG 225 (477)
Q Consensus 146 i~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDlGGg 225 (477)
.+.+|...+. ..++.++++.+.+. .++ .+.+|.++.||..... .. .+..++|+|||
T Consensus 94 -~~v~tvp~~~--~~~~~~~~~~~~~~----~g~-----~~~~i~~e~~A~a~~~----~~--------~~~~viDiGgg 149 (272)
T 3h1q_A 94 -QAATAIPPGT--VGRNAEACGHVVAG----AGL-----ELVTLVDEPVAAARAL----GI--------NDGIVVDIGGG 149 (272)
T ss_dssp -EEEEECCSCC-----CTTHHHHHHHH----TTC-----EEEEEECHHHHHHHHH----TC--------SSEEEEEECSS
T ss_pred -eEEEEcCCCC--CHHHHHHHHHHHHH----cCC-----eeeecccHHHHHHHHH----cC--------CCEEEEEECCC
Confidence 2233333222 34556666665554 345 7899999999874322 11 24689999999
Q ss_pred ceeeEEee
Q 048388 226 SVQMAYAI 233 (477)
Q Consensus 226 StQiaf~~ 233 (477)
||+++...
T Consensus 150 st~~~~~~ 157 (272)
T 3h1q_A 150 TTGIAVIE 157 (272)
T ss_dssp CEEEEEEE
T ss_pred cEEEEEEE
Confidence 99998763
No 11
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=95.11 E-value=0.11 Score=52.22 Aligned_cols=56 Identities=23% Similarity=0.265 Sum_probs=33.9
Q ss_pred EEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecC--Cccc-cCCChHHHHHHHHHHHHHH
Q 048388 70 YAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKP--GLSA-YASDPQAAANSLASLLDKA 132 (477)
Q Consensus 70 y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~p--GLs~-~~~~~~~~~~~l~~ll~~a 132 (477)
..+-||+||+.+|+.+.+ .+ .+ .+. . .-....| ++.. -..|++.+.+.|+.+++.+
T Consensus 14 ~~vgiDiGt~~i~~~~~~--~~-~~-~i~-~--~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~~~~ 72 (377)
T 2ych_A 14 EALGLEIGASALKLVEVS--GN-PP-ALK-A--LASRPTPPGLLMEGMVAEPAALAQEIKELLLEA 72 (377)
T ss_dssp CCEEEEECSSEEEEEEEE--TT-TT-EEE-E--EEEEECCTTSEETTEESCHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCeEEEEEEe--CC-ce-EEE-E--EEeEECCCCcccCCCcCCHHHHHHHHHHHHHHc
Confidence 457899999999999985 22 21 110 0 1111212 2211 1247899999999998874
No 12
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=92.72 E-value=0.63 Score=48.09 Aligned_cols=95 Identities=14% Similarity=0.159 Sum_probs=57.4
Q ss_pred ceEEEEEEcCCCccEEEEEEEeCCC-CceecccccceEEeecCCccc-cCCChHHHHHHHHHHHHHHHhhCCCCCCCCcc
Q 048388 68 KSYAVIFDAGSSGSRVHVYCFDQNL-DLVPIGKDLELFVQTKPGLSA-YASDPQAAANSLASLLDKAQSVVPQDLRPKTP 145 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~~~~~-~l~~i~~~~e~~~k~~pGLs~-~~~~~~~~~~~l~~ll~~a~~~vp~~~~~~tp 145 (477)
.++.+.+|+||+..++.|-+...+. .++-.+ .....|+.. -..|.+.+.++++.+++.|++..... ...
T Consensus 7 ~~~ivglDIGts~I~~vv~~~~~~~~~i~g~~------~~~s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~~---i~~ 77 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLGKRDQEWEALAFS------SVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQKS---LRS 77 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEEC----CEEEEEE------EEECCSEETTEESBHHHHHHHHHHHHHHHHHHHTSC---CCS
T ss_pred CCEEEEEEccCCEEEEEEEEEcCCCCEEEEEE------EeccCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCCC---cCc
Confidence 3577899999999999999876432 222211 111234433 13488999999999999998765432 334
Q ss_pred -EEEEeehh------------h----hcCChhhHHHHHHHHHH
Q 048388 146 -VKVGATAG------------L----RQLGVDASDRILQAVRD 171 (477)
Q Consensus 146 -i~l~ATAG------------m----R~l~~~~~~~il~~vr~ 171 (477)
+++...++ + +.+..++-+.++++.+.
T Consensus 78 ~v~v~i~g~~~~i~s~~~~~~i~~~~~~i~~~di~~~i~~a~~ 120 (419)
T 4a2a_A 78 DFVISFSSVSFEREDTVIERDFGEEKRSITLDILSEMQSEALE 120 (419)
T ss_dssp EEEEEECCTTCEEEEEEEEEECCSSCEECCHHHHHHHHHHHHH
T ss_pred eEEEEEcCCcCeEEEEEeEEEEeCCCCEECHHHHHHHHHHhhh
Confidence 66555554 1 34555566666665443
No 13
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=92.69 E-value=0.92 Score=44.78 Aligned_cols=92 Identities=23% Similarity=0.204 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCCCCCccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchh
Q 048388 118 PQAAANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSY 197 (477)
Q Consensus 118 ~~~~~~~l~~ll~~a~~~vp~~~~~~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y 197 (477)
-+.+.+.+..+++.++..- ....+++.+--.+. .+..+++.+.++++. .+|. .+++++ |..-
T Consensus 73 ~~~~~~i~~~~l~~~~~~~---~~~~~~~vitvP~~---~~~~~r~~~~~a~~~-----aG~~----~~~li~---ep~A 134 (344)
T 1jce_A 73 YTVALVMLRYFINKAKGGM---NLFKPRVVIGVPIG---ITDVERRAILDAGLE-----AGAS----KVFLIE---EPMA 134 (344)
T ss_dssp HHHHHHHHHHHHHHHHTSC---CSCCCEEEEEECTT---CCHHHHHHHHHHHHH-----TTCS----EEEEEE---HHHH
T ss_pred hHHHHHHHHHHHHHHhhcc---ccCCCeEEEEECCC---CCHHHHHHHHHHHHH-----cCCC----eEeccC---CHHH
Confidence 3445666777777665531 11235565554443 345666666666543 3341 455554 3322
Q ss_pred hHHHHHHhhccCCCCCCceEEEEecCCCceeeEEe
Q 048388 198 QWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAYA 232 (477)
Q Consensus 198 ~WvavNyllg~l~~~~~~t~gviDlGGgStQiaf~ 232 (477)
+.+ .|.+. .....++.|+|+|||.|.++..
T Consensus 135 aa~--~~~~~---~~~~~~~lVvDiGggttdvsv~ 164 (344)
T 1jce_A 135 AAI--GSNLN---VEEPSGNMVVDIGGGTTEVAVI 164 (344)
T ss_dssp HHH--HTTCC---TTSSSCEEEEEECSSCEEEEEE
T ss_pred HHH--hcCCC---CCCCceEEEEEeCCCeEEEEEE
Confidence 222 22221 1224578999999999999865
No 14
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=92.28 E-value=5.6 Score=39.60 Aligned_cols=93 Identities=16% Similarity=0.202 Sum_probs=51.0
Q ss_pred hHHH-HHHHHHHHHHHHhhCCCCCCCCccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccch
Q 048388 118 PQAA-ANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGS 196 (477)
Q Consensus 118 ~~~~-~~~l~~ll~~a~~~vp~~~~~~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~ 196 (477)
|+++ +..|..|.+.|+..+.. ..+.+.+--.+.. +..+++.+.++++. .+|. .+++++...=+.
T Consensus 130 ~~ei~a~~l~~l~~~a~~~~~~---~~~~~vitvP~~~---~~~~r~~~~~a~~~-----aGl~----~~~li~Ep~Aaa 194 (394)
T 3qfu_A 130 PEEISGMILGKMKQIAEDYLGT---KVTHAVVTVPAYF---NDAQRQATKDAGTI-----AGLN----VLRIVNEPTAAA 194 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTC---CHHHHHHHHHHHHH-----TTCE----EEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCC---CcceEEEEECCCC---CHHHHHHHHHHHHH-----cCCc----eEEEecCHHHHH
Confidence 4443 56677777778777643 2334444333332 23566666665543 3441 456665332222
Q ss_pred hhHHHHHHhhccCCCCCCceEEEEecCCCceeeEEe
Q 048388 197 YQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAYA 232 (477)
Q Consensus 197 y~WvavNyllg~l~~~~~~t~gviDlGGgStQiaf~ 232 (477)
+ .|.+.. .....++.|+|+|||.|.++..
T Consensus 195 ~-----~~~~~~--~~~~~~vlV~D~Gggt~dvsv~ 223 (394)
T 3qfu_A 195 I-----AYGLDK--SDKEHQIIVYDLGGGTFDVSLL 223 (394)
T ss_dssp H-----HTTTTS--CSSCEEEEEEEECSSCEEEEEE
T ss_pred H-----HHhhcc--CCCCceEEEEEcCCCceeEEEE
Confidence 2 232222 1224578899999999999865
No 15
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=86.96 E-value=10 Score=40.83 Aligned_cols=94 Identities=19% Similarity=0.266 Sum_probs=51.6
Q ss_pred hHHH-HHHHHHHHHHHHhhCCCCCCCCccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccch
Q 048388 118 PQAA-ANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGS 196 (477)
Q Consensus 118 ~~~~-~~~l~~ll~~a~~~vp~~~~~~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~ 196 (477)
|+++ +..|..|.+.|...+.. ..+.+.+---|.. ...+++.+.++++. .++. .+++|+-..=|
T Consensus 112 p~ei~a~iL~~lk~~ae~~lg~---~v~~~VITVPa~f---~~~qr~a~~~Aa~~-----AGl~----v~~li~EP~AA- 175 (605)
T 4b9q_A 112 PPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYF---NDAQRQATKDAGRI-----AGLE----VKRIINEPTAA- 175 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTC---CHHHHHHHHHHHHH-----TTCE----EEEEEEHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCC---CHHHHHHHHHHHHH-----cCCc----eEEEeCcHHHH-
Confidence 4443 56677777777776532 1233333333322 23455555555544 3441 45666544333
Q ss_pred hhHHHHHHhhccCCCCCCceEEEEecCCCceeeEEee
Q 048388 197 YQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAYAI 233 (477)
Q Consensus 197 y~WvavNyllg~l~~~~~~t~gviDlGGgStQiaf~~ 233 (477)
++.|.+..- ....++.|+|+|||.+.++...
T Consensus 176 ----Alaygl~~~--~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 4b9q_A 176 ----ALAYGLDKG--TGNRTIAVYDLGGGAFDISIIE 206 (605)
T ss_dssp ----HHHHHTTSC--CSSEEEEEEEECSSCEEEEEEE
T ss_pred ----HHHhhhhcc--CCCCEEEEEECCCCeEEEEEEE
Confidence 334444321 1246788999999999999653
No 16
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=86.35 E-value=1.3 Score=42.77 Aligned_cols=109 Identities=17% Similarity=0.136 Sum_probs=57.8
Q ss_pred EEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCCChHHHHHHHHHHHHHHHh-hCCCCCCCCccEEE
Q 048388 70 YAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQS-VVPQDLRPKTPVKV 148 (477)
Q Consensus 70 y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~~-~vp~~~~~~tpi~l 148 (477)
|.+-||+|||++++.|+. .+..++. ......+| +|.+ .+..+++.+.+ .++. .....+
T Consensus 4 ~~lGiD~Gst~~k~~l~d--~~g~i~~------~~~~~~~~------~~~~---~~~~~l~~l~~~~~~~----~~i~~i 62 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILK--DGKEIVA------KSLVAVGT------GTSG---PARSISEVLENAHMKK----EDMAFT 62 (270)
T ss_dssp EEEEEEECSSEEEEEEEE--TTTEEEE------EEEEECCS------SCCH---HHHHHHHHHHHHTCCG----GGCSEE
T ss_pred EEEEEEeccceEEEEEEe--CCCCEEE------EEEecCCC------CHHH---HHHHHHHHHHHcCCCh----hHEEEE
Confidence 667899999999999984 3333322 11111222 3432 23344444433 3321 122457
Q ss_pred EeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEecCCCcee
Q 048388 149 GATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQ 228 (477)
Q Consensus 149 ~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDlGGgStQ 228 (477)
.+|.-.|.+-+ . | ...+ .+|-.=...++.|+.+ +...+||+||+.+.
T Consensus 63 ~~TG~g~~~~~-----------------~-~-----~~~~---v~Ei~ah~~ga~~~~~-------~~~~vidiGGqd~k 109 (270)
T 1hux_A 63 LATGYGRNSLE-----------------G-I-----ADKQ---MSELSCHAMGASFIWP-------NVHTVIDIGGQDVK 109 (270)
T ss_dssp EEESTTTTTTT-----------------T-T-----CSEE---ECHHHHHHHHHHHHCT-------TCCEEEEEETTEEE
T ss_pred EEeCccccchh-----------------h-c-----CCCC---cccHHHHHHHHHHhCC-------CCCEEEEECCCceE
Confidence 77877776311 0 1 0111 2343334456666643 22358999999998
Q ss_pred eEEe
Q 048388 229 MAYA 232 (477)
Q Consensus 229 iaf~ 232 (477)
+.+.
T Consensus 110 ~i~~ 113 (270)
T 1hux_A 110 VIHV 113 (270)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 17
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=85.61 E-value=4 Score=38.88 Aligned_cols=109 Identities=18% Similarity=0.192 Sum_probs=60.7
Q ss_pred EEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCCChHHHHHHHHHHHHHHHhhCCCCCCCCccEEEE
Q 048388 70 YAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTPVKVG 149 (477)
Q Consensus 70 y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~~~vp~~~~~~tpi~l~ 149 (477)
|.+=||+|||+|-+.|. +.+..++. .... +....|+.+.+.|..+++.+... ........
T Consensus 2 ~~lGID~GsT~tk~av~--d~~~~il~--------~~~~----~~g~~~e~a~~vl~~~~~~a~~~------~~~~~~~a 61 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVIL--KNGEDIVA--------SETI----SSGTGTTGPSRVLEKLYGKTGLA------REDIKKVV 61 (276)
T ss_dssp EEEEEEECSSCEEEEEE--ETTTEEEE--------EEEE----SCCTTSSHHHHHHHHHHHHHCCC------GGGEEEEE
T ss_pred eEEEEEcCccEEEEEEE--ECCCeEEE--------EEEe----cCCCCHHHHHHHHHHHHHHCCCc------chhccccc
Confidence 56779999999998886 34322221 1111 11234666777777777766322 12345566
Q ss_pred eehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEecCCCceee
Q 048388 150 ATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQM 229 (477)
Q Consensus 150 ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDlGGgStQi 229 (477)
+|.+-|+.- . . ..++|+ +-+| ...++.++.+ ....++|+||+.+.+
T Consensus 62 ~t~~~~~a~---------------~----~-----~~~~Vn-e~~a--ha~a~~~~~~-------~~~~vl~lgG~~~~~ 107 (276)
T 4ehu_A 62 VTGYGRMNY---------------S----D-----ADKQIS-ELSC--HARGVNFIIP-------ETRTIIDIGGQDAKV 107 (276)
T ss_dssp EESTTGGGC---------------C----S-----CSEECC-HHHH--HHHHHHHHST-------TCCEEEEECSSCEEE
T ss_pred cCchHHHHh---------------h----C-----CCcccc-hHHH--HHHHHHHhCC-------CCCeEEEEcCCCceE
Confidence 777777621 1 1 122332 1222 2344444432 345799999998888
Q ss_pred EEe
Q 048388 230 AYA 232 (477)
Q Consensus 230 af~ 232 (477)
.+.
T Consensus 108 ~~~ 110 (276)
T 4ehu_A 108 LKL 110 (276)
T ss_dssp EEE
T ss_pred EEE
Confidence 766
No 18
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=83.03 E-value=1.8 Score=45.79 Aligned_cols=61 Identities=26% Similarity=0.443 Sum_probs=36.0
Q ss_pred CceEEEEEEcCCCccEEEEEEEeCCCCceecccccce-EEeecCCccccCCChHHHHHHHHHHHHHH
Q 048388 67 SKSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLEL-FVQTKPGLSAYASDPQAAANSLASLLDKA 132 (477)
Q Consensus 67 ~~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~-~~k~~pGLs~~~~~~~~~~~~l~~ll~~a 132 (477)
..+|.+.||+|+|++|..||. .+..++..... +. ...-.||-. ..+|++..+.+...+..+
T Consensus 2 ekkYvlgID~GTss~Ka~l~d--~~G~~va~~~~-~~~~~~p~~G~~--Eqdp~~~w~~~~~~i~~~ 63 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMD--HDANIISVSQR-EFEQIYPKPGWV--EHDPMEIWATQSSTLVEV 63 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEEC--TTCCEEEEEEE-ECCCBCSSTTCC--EECHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEccccceeeeEEc--CCCCEEEEEEE-ecCcccCCCCcE--EECHHHHHHHHHHHHHHH
Confidence 357999999999999999984 44444322110 00 011245532 358888766655555544
No 19
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=78.93 E-value=14 Score=38.91 Aligned_cols=65 Identities=11% Similarity=0.198 Sum_probs=36.2
Q ss_pred cEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEecCC
Q 048388 145 PVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDLGG 224 (477)
Q Consensus 145 pi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDlGG 224 (477)
||.+.-.. ..+..+++++.+.+-+. |.+. .+-++ +++. ..-|..|. .|..|||+|+
T Consensus 116 pvlltep~---~n~~~~Re~~~eilFE~------f~vp--av~l~---~~~v----lalya~G~------~tglVVDiG~ 171 (498)
T 3qb0_A 116 PALLTEPV---WNSTENRKKSLEVLLEG------MQFE--ACYLA---PTST----CVSFAAGR------PNCLVVDIGH 171 (498)
T ss_dssp CEEEEECT---TCCHHHHHHHHHHHHTT------SCCS--EEEEE---EHHH----HHHHHHTC------SSEEEEEECS
T ss_pred ceEEEeCC---CCcHHHHHHHHHHHHhh------cCCC--eEeec---chHH----HHHHHcCC------CeEEEEEcCC
Confidence 77654433 23455666666554332 3222 33333 2443 33355553 3567999999
Q ss_pred CceeeEEee
Q 048388 225 GSVQMAYAI 233 (477)
Q Consensus 225 gStQiaf~~ 233 (477)
|.|+|+-..
T Consensus 172 g~T~vvPI~ 180 (498)
T 3qb0_A 172 DTCSVSPIV 180 (498)
T ss_dssp SCEEEEEEE
T ss_pred CcEEEEEEe
Confidence 999999553
No 20
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=70.62 E-value=8.2 Score=40.50 Aligned_cols=63 Identities=19% Similarity=0.293 Sum_probs=38.7
Q ss_pred ceEEEEEEcCCCccEEEEEEEeCCCCceecccccce-EEeecCCccccCCChHHHHHHHHHHHHHHHhh
Q 048388 68 KSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLEL-FVQTKPGLSAYASDPQAAANSLASLLDKAQSV 135 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~-~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~~~ 135 (477)
++|.+.||+|+|++|..+|.. +..++..... +. .....||.. ..+|+...+.+..+++.+.+.
T Consensus 3 m~~~lgIDiGtts~K~~l~d~--~G~il~~~~~-~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~~~ 66 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDI--NGKAVASVSK-GYPLIQTKVGQA--EEDPKLIFDAVQEIIFDLTQK 66 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEET--TSCEEEEEEE-ECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEecCCceEEEEEcC--CCCEEEEEEe-ecceecCCCCcE--EECHHHHHHHHHHHHHHHHHh
Confidence 468899999999999999863 3344321110 00 011234432 347888877777777776544
No 21
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=69.94 E-value=11 Score=37.95 Aligned_cols=95 Identities=12% Similarity=0.165 Sum_probs=52.3
Q ss_pred hHHH-HHHHHHHHHHHHhhCCCCCCCCccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccch
Q 048388 118 PQAA-ANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGS 196 (477)
Q Consensus 118 ~~~~-~~~l~~ll~~a~~~vp~~~~~~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~ 196 (477)
|+++ +..|..|.+.|+..+.. ..+.+.+.--+..- ..+++.+.++++. .+|. .+++|+-.+-+.
T Consensus 127 ~~ev~~~~L~~l~~~a~~~~~~---~~~~~vitvPa~~~---~~~r~~~~~a~~~-----AGl~----~~~li~Ep~AAa 191 (409)
T 4gni_A 127 VSEIATRYLRRLVGAASEYLGK---KVTSAVITIPTNFT---EKQKAALIAAAAA-----ADLE----VLQLISEPAAAV 191 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCC---HHHHHHHHHHHHH-----TTCE----EEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCC---HHHHHHHHHHHHH-----cCCC----eEEEEcCHHHHH
Confidence 4444 67888888888876542 12334443333332 3456666666554 3451 456666443332
Q ss_pred hhHHHHHHhhccCCCCCCceEEEEecCCCceeeEEe
Q 048388 197 YQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAYA 232 (477)
Q Consensus 197 y~WvavNyllg~l~~~~~~t~gviDlGGgStQiaf~ 232 (477)
+.|++..-......++.|+|+|||++.++..
T Consensus 192 -----~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~ 222 (409)
T 4gni_A 192 -----LAYDARPEATISDKIIVVADLGGSRSDVTVL 222 (409)
T ss_dssp -----HHTTC------CCEEEEEEEECSSCEEEEEE
T ss_pred -----HHHhcccccCCCCCEEEEEECCCCceEEEEE
Confidence 2333321001124578999999999999864
No 22
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=68.60 E-value=6.1 Score=41.98 Aligned_cols=61 Identities=16% Similarity=0.253 Sum_probs=36.7
Q ss_pred ceEEEEEEcCCCccEEEEEEEeCCCCceecccccce-EEeecCCccccCCChHHHHHHHHHHHHHHH
Q 048388 68 KSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLEL-FVQTKPGLSAYASDPQAAANSLASLLDKAQ 133 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~-~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~ 133 (477)
++|.+.||+|+|++|+.||. .+..++..... +. .....||-. ..+|++..+.+..+++.+.
T Consensus 4 ~~~~lgIDiGtts~ka~l~d--~~G~il~~~~~-~~~~~~p~~g~~--eqdp~~~~~~~~~~i~~~~ 65 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFD--LQGRMVGQASR-EITMFKPKADFV--EQSSENIWQAVCNAVRDAV 65 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEE--TTSCEEEEEEE-ECCCEEEETTEE--EECHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECcccEEEEEEC--CCCCEEEEEEE-ecccccCCCCcc--ccCHHHHHHHHHHHHHHHH
Confidence 56899999999999999996 33344321110 00 112235532 3478877766666666553
No 23
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=61.79 E-value=26 Score=36.57 Aligned_cols=93 Identities=22% Similarity=0.265 Sum_probs=53.4
Q ss_pred ChHHH-HHHHHHHHHHHHhhCCCCCCCCccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccc
Q 048388 117 DPQAA-ANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEG 195 (477)
Q Consensus 117 ~~~~~-~~~l~~ll~~a~~~vp~~~~~~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg 195 (477)
.|+++ +..|..|.+.|++.+.. ..+.+.+--.|. .+..+++++.++++. .++. .+++|+-..=+
T Consensus 85 ~~~ei~a~~L~~l~~~ae~~l~~---~~~~~VitvPa~---~~~~qr~a~~~a~~~-----AGl~----~~~li~Ep~AA 149 (509)
T 2v7y_A 85 TPQEISAIILQYLKSYAEDYLGE---PVTRAVITVPAY---FNDAQRQATKDAGRI-----AGLE----VERIINEPTAA 149 (509)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTT---CCHHHHHHHHHHHHH-----TTCE----EEEEEEHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCC---CCHHHHHHHHHHHHH-----cCCC----eEEEecCHHHH
Confidence 46665 45677777777776542 234555544442 334566666666543 3341 45666433222
Q ss_pred hhhHHHHHHhhccCCCCCCceEEEEecCCCceeeEEe
Q 048388 196 SYQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAYA 232 (477)
Q Consensus 196 ~y~WvavNyllg~l~~~~~~t~gviDlGGgStQiaf~ 232 (477)
++.|.+.. ....++.|+|+|||.+.++..
T Consensus 150 -----Alay~~~~---~~~~~vlV~D~GgGT~Dvsv~ 178 (509)
T 2v7y_A 150 -----ALAYGLDK---EEDQTILVYDLGGGTFDVSIL 178 (509)
T ss_dssp -----HHHTTGGG---SCSEEEEEEEECSSCEEEEEE
T ss_pred -----HHHHhhcc---CCCCEEEEEECCCCeEEEEEE
Confidence 22344432 124578999999999999854
No 24
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=59.09 E-value=13 Score=38.93 Aligned_cols=62 Identities=26% Similarity=0.422 Sum_probs=36.9
Q ss_pred ceEEEEEEcCCCccEEEEEEEeCCCCceecccccce-EEeecCCccccCCChHHHHHHHHHHHHHHHh
Q 048388 68 KSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLEL-FVQTKPGLSAYASDPQAAANSLASLLDKAQS 134 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~-~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~~ 134 (477)
++|.+.||+|+|++|+.||. .+..++.... .+. .....||- ...+|++..+.+..+++.+.+
T Consensus 2 ~~~~lgIDiGtts~k~~l~d--~~G~il~~~~-~~~~~~~p~~g~--~e~dp~~~~~~~~~~i~~~~~ 64 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMD--HDANIISVSQ-REFEQIYPKPGW--VEHDPMEIWATQSSTLVEVLA 64 (510)
T ss_dssp CCEEEEEEECSSEEEEEEEC--TTCCEEEEEE-EECCCBCSSTTC--CEECHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEcCCcceEEEEEC--CCCCEEEEEE-EecccccCCCCc--EEECHHHHHHHHHHHHHHHHH
Confidence 46889999999999999985 3334332110 000 00122332 235788877777777666544
No 25
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=58.51 E-value=35 Score=33.65 Aligned_cols=94 Identities=21% Similarity=0.254 Sum_probs=50.0
Q ss_pred ChHHH-HHHHHHHHHHHHhhCCCCCCCCccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccc
Q 048388 117 DPQAA-ANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEG 195 (477)
Q Consensus 117 ~~~~~-~~~l~~ll~~a~~~vp~~~~~~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg 195 (477)
.|+++ +..|..+.+.|++.+.. ..+.+.+.-.+ ..+..+++.+.++++. .+| +++.=-.|.
T Consensus 111 ~~~~i~~~~L~~l~~~a~~~~~~---~~~~~vitvP~---~~~~~~r~~~~~a~~~-----aGl-------~~~~li~Ep 172 (383)
T 1dkg_D 111 APPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPA---YFNDAQRQATKDAGRI-----AGL-------EVKRIINEP 172 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSS---CCCEEEECBCT---TCCHHHHHHHHHHHHH-----TTC-------EESCCCBHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECC---CCCHHHHHHHHHHHHH-----cCC-------ceEEEeccH
Confidence 35554 56777787877776532 12344442222 2334566666666544 333 233223343
Q ss_pred hhhHHHHHHhhccCCCCCCceEEEEecCCCceeeEEe
Q 048388 196 SYQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAYA 232 (477)
Q Consensus 196 ~y~WvavNyllg~l~~~~~~t~gviDlGGgStQiaf~ 232 (477)
.=+ ++.|.+..- ....++.|+|+|||.|.++..
T Consensus 173 ~Aa--a~~~~~~~~--~~~~~~lVvD~Gggttdvsv~ 205 (383)
T 1dkg_D 173 TAA--ALAYGLDKG--TGNRTIAVYDLGGGTFDISII 205 (383)
T ss_dssp HHH--HHHHTCCC---CCEEEEEEEEECSSCEEEEEE
T ss_pred HHH--HHHHHhccC--CCCcEEEEEEcCCCeEEEEEE
Confidence 222 223443211 123578899999999999865
No 26
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=58.23 E-value=22 Score=35.41 Aligned_cols=95 Identities=15% Similarity=0.210 Sum_probs=51.9
Q ss_pred hHHH-HHHHHHHHHHHHhhCCCCCCCCccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccch
Q 048388 118 PQAA-ANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGS 196 (477)
Q Consensus 118 ~~~~-~~~l~~ll~~a~~~vp~~~~~~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~ 196 (477)
|+++ +..|..|.+.|+..+... .+.+.+---|.. +..+++.+.++++. .+|. .+++++...-+.
T Consensus 135 ~~ei~a~~L~~l~~~a~~~~~~~---~~~~vitvPa~~---~~~~r~~~~~a~~~-----AGl~----~~~li~Ep~AAa 199 (404)
T 3i33_A 135 PEEISSMVLTKMKEIAEAYLGGK---VHSAVITVPAYF---NDSQRQATKDAGTI-----TGLN----VLRIINEPTAAA 199 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSC---CCEEEEEECTTC---CHHHHHHHHHHHHH-----HTCE----EEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccC---CCcEEEEECCCC---CHHHHHHHHHHHHH-----cCCC----eEEEeccHHHHH
Confidence 4444 566777777777765321 234444333322 24566666665554 2341 466776444433
Q ss_pred hhHHHHHHhhccCCC-CCCceEEEEecCCCceeeEEe
Q 048388 197 YQWVTINYLLGNLGK-KYSNTVGVVDLGGGSVQMAYA 232 (477)
Q Consensus 197 y~WvavNyllg~l~~-~~~~t~gviDlGGgStQiaf~ 232 (477)
++ |.+..-.. ....++.|+|+|||.+.++..
T Consensus 200 ~~-----~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 200 IA-----YGLDKKGCAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp HH-----TTTTSSCSSSSCCEEEEEEECSSCEEEEEE
T ss_pred HH-----HHhhcccccCCCceEEEEECCCCcEEEEEE
Confidence 32 33321100 024678999999999999854
No 27
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=57.15 E-value=14 Score=38.73 Aligned_cols=61 Identities=15% Similarity=0.051 Sum_probs=36.9
Q ss_pred ceEEEEEEcCCCccEEEEEEEeCCCCceecccccce-EEeecCCccccCCChHHHHHHHHHHHHHHH
Q 048388 68 KSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLEL-FVQTKPGLSAYASDPQAAANSLASLLDKAQ 133 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~-~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~ 133 (477)
++|.+.||+|+|++|+.+|..+ ..++..... +. .....||-. ..+|+...+.+..+++.+.
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~--G~il~~~~~-~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~ 65 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRD--GGLHFQRSI-ALETYGDGNGPV--EQDAGDWYDAVQRIASSWW 65 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTT--SCEEEEEEE-ECCCBSTTSSCC--EECHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEeCCCceEEEEECCC--CCEEEEEEe-ecceecCCCCCE--EECHHHHHHHHHHHHHHHH
Confidence 4688999999999999998643 333321100 00 011234422 3478887777777776665
No 28
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=56.19 E-value=13 Score=39.02 Aligned_cols=60 Identities=25% Similarity=0.320 Sum_probs=35.8
Q ss_pred ceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEe--ecCCccccCCChHHHHHHHHHHHHHHH
Q 048388 68 KSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQ--TKPGLSAYASDPQAAANSLASLLDKAQ 133 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k--~~pGLs~~~~~~~~~~~~l~~ll~~a~ 133 (477)
++|.+.||+|+|++|+.+|.. +..++.... . .+.. ..||-. ..+|+...+.+..+++.+.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~--~G~il~~~~-~-~~~~~~p~~g~~--e~dp~~~~~~~~~~i~~~~ 65 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR--NGKKIGSSQ-K-EFPQYFPKSGWV--EHNANEIWNSVQSVIAGAF 65 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET--TSCEEEEEE-E-ECCCBCSSTTCC--EECHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCceEEEEECC--CCCEEEEEE-E-ecCccCCCCCcE--EECHHHHHHHHHHHHHHHH
Confidence 468899999999999999964 333332110 0 0111 123422 3578887776666666553
No 29
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=53.62 E-value=24 Score=37.11 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=36.9
Q ss_pred CceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCCChHHHHHHHHHHHHHH
Q 048388 67 SKSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKA 132 (477)
Q Consensus 67 ~~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~~~~~~~~~l~~ll~~a 132 (477)
..+|.+.||+|+|++|+.||..+ +..++.. . ....||-. ..+|+...+.+..+++.+
T Consensus 3 ~~~~~lgIDiGtts~ka~l~d~~-~G~i~~~-----~-~~~~~g~~--e~d~~~~~~~i~~~l~~~ 59 (515)
T 3i8b_A 3 LRTLVAGVDTSTQSCKVRVTDAE-TGELVRF-----G-QAKHPNGT--SVDPSYWWSAFQEAAEQA 59 (515)
T ss_dssp CSCEEEEEEECSSEEEEEEEETT-TCCEEEE-----E-EEECCSSS--EECTHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEeccccEEEEEEECC-CCeEEEE-----E-EEeCCCCc--eECHHHHHHHHHHHHHhc
Confidence 35688999999999999998632 3343321 1 11224422 347888888887777654
No 30
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=53.20 E-value=30 Score=36.58 Aligned_cols=94 Identities=17% Similarity=0.222 Sum_probs=52.9
Q ss_pred hHHH-HHHHHHHHHHHHhhCCCCCCCCccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccch
Q 048388 118 PQAA-ANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGS 196 (477)
Q Consensus 118 ~~~~-~~~l~~ll~~a~~~vp~~~~~~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~ 196 (477)
|+++ +..|..|.+.|+..+.. ..+.+.+--.|..- ..+++++.++++. .++. .+++|+-..-|
T Consensus 116 p~ei~a~~L~~lk~~ae~~lg~---~v~~~VitVPa~f~---~~qr~a~~~A~~~-----AGl~----~~~li~EP~AA- 179 (554)
T 1yuw_A 116 PEEVSSMVLTKMKEIAEAYLGK---TVTNAVVTVPAYFN---DSQRQATKDAGTI-----AGLN----VLRIINEPTAA- 179 (554)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSS---CCCEEEEEECTTCC---HHHHHHHHHHHHT-----TTCE----EEEEEEHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCC---HHHHHHHHHHHHH-----cCCC----eEEEeCcHHHH-
Confidence 5554 46677777777776542 23445554444322 3456555555443 3452 46666643332
Q ss_pred hhHHHHHHhhccCCCCCCceEEEEecCCCceeeEEe
Q 048388 197 YQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAYA 232 (477)
Q Consensus 197 y~WvavNyllg~l~~~~~~t~gviDlGGgStQiaf~ 232 (477)
++.|.+..-. +...++.|+|+|||.+.++..
T Consensus 180 ----Alay~~~~~~-~~~~~vlV~D~GgGT~Dvsv~ 210 (554)
T 1yuw_A 180 ----AIAYGLDKKV-GAERNVLIFDLGGGTFDVSIL 210 (554)
T ss_dssp ----HHHTTCSTTC-SSCEEEEEEEECSSCEEEEEE
T ss_pred ----HHHHHhhccC-CCCcEEEEEEcCCCeEEEEEE
Confidence 3344443211 123578999999999999864
No 31
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=52.29 E-value=20 Score=37.55 Aligned_cols=61 Identities=13% Similarity=0.179 Sum_probs=35.6
Q ss_pred CceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEE--eecCCccccCCChHHHHHHHHHHHHHHH
Q 048388 67 SKSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFV--QTKPGLSAYASDPQAAANSLASLLDKAQ 133 (477)
Q Consensus 67 ~~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~--k~~pGLs~~~~~~~~~~~~l~~ll~~a~ 133 (477)
.++|.+.||+|+|++|+.||. .+..++.... ..+. ...||- ...+|++..+.+..+++.+.
T Consensus 5 ~~~~~lgIDiGtts~k~~l~d--~~G~il~~~~--~~~~~~~p~~g~--~e~dp~~~~~~i~~~i~~~~ 67 (508)
T 3ifr_A 5 QGRQVIGLDIGTTSTIAILVR--LPDTVVAVAS--RPTTLSSPHPGW--AEEDPAQWWDNARAVLAELK 67 (508)
T ss_dssp --CEEEEEEECSSEEEEEEEE--TTTEEEEEEE--EECCCBCSSTTC--CEECHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEecCcceEEEEEC--CCCCEEEEEE--EecceecCCCCc--eEECHHHHHHHHHHHHHHHH
Confidence 356999999999999999996 3333332110 0011 112342 23578887777766666654
No 32
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=50.73 E-value=14 Score=38.56 Aligned_cols=60 Identities=15% Similarity=0.295 Sum_probs=36.1
Q ss_pred eEEEEEEcCCCccEEEEEEEeCCCCceecccccceEE--eecCCccccCCChHHHHHHHHHHHHHHHh
Q 048388 69 SYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFV--QTKPGLSAYASDPQAAANSLASLLDKAQS 134 (477)
Q Consensus 69 ~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~--k~~pGLs~~~~~~~~~~~~l~~ll~~a~~ 134 (477)
+|.+.||+|+|++|+.+|.. +..++.... ..+. ...||- ...+|+...+.+..+++.+.+
T Consensus 6 ~~~lgIDiGtts~k~~l~d~--~G~il~~~~--~~~~~~~p~~g~--~e~d~~~~~~~~~~~i~~~~~ 67 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ--KGEIAGVAQ--REFKQYFPQSGW--VEHDANEIWTSVLAVMTEVIN 67 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSCEEEEEE--EECCCBCSSTTC--CEECHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEeCccceEEEEEcC--CCCEEEEEE--eecccccCCCCc--EEECHHHHHHHHHHHHHHHHH
Confidence 58899999999999999854 333332110 0111 113342 235788877777776666544
No 33
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=50.57 E-value=13 Score=38.95 Aligned_cols=61 Identities=13% Similarity=0.156 Sum_probs=35.3
Q ss_pred ceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCCChHHHHHHHHHHHHHHH
Q 048388 68 KSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQ 133 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~ 133 (477)
++|.+.||+|+|++|+.+|. .+..++..... +......||- ...+|++..+.+...++.+.
T Consensus 5 m~~~lgIDiGTts~Ka~l~d--~~G~i~~~~~~-~~~~~~~~g~--~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWD--LDGRMLDRQVR-PSIPLEIDGI--RRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp ---CEEEEECSSEEEEEEEC--TTSCEEEEEEE-ECCCEESSSC--EECCHHHHHHHHHHHHHHTT
T ss_pred hceEEEEEcCCCCeEEEEEE--CCCcEEEEEEe-cCCcccCCCc--eeECHHHHHHHHHHHHHHHH
Confidence 46888999999999999986 44344332110 0101123442 24578887777776666553
No 34
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=50.27 E-value=18 Score=37.79 Aligned_cols=59 Identities=24% Similarity=0.390 Sum_probs=34.4
Q ss_pred ceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEE--eecCCccccCCChHHHHHHHHHHHHHH
Q 048388 68 KSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFV--QTKPGLSAYASDPQAAANSLASLLDKA 132 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~--k~~pGLs~~~~~~~~~~~~l~~ll~~a 132 (477)
++|.+.||+|+|++|+.||.. +..++.... . .+. ...||- ...+|+...+.+..+++.+
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~--~g~i~~~~~-~-~~~~~~~~~g~--~e~d~~~~~~~i~~~i~~~ 63 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDE--ELNIVHSNN-L-NHEQKCLKPGW--YEHDPIEIMTNLYNLMNEG 63 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEET--TCCEEEEEE-E-ECCCBCCSTTC--CEECHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEeCCcceEEEEECC--CCCEEEEEE-E-eeeeecCCCCc--EEECHHHHHHHHHHHHHHH
Confidence 568899999999999999963 333332110 0 000 112332 2347887766666666554
No 35
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=49.18 E-value=36 Score=36.17 Aligned_cols=21 Identities=19% Similarity=0.344 Sum_probs=18.3
Q ss_pred ceEEEEEEcCCCccEEEEEEE
Q 048388 68 KSYAVIFDAGSSGSRVHVYCF 88 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~ 88 (477)
++|.+.||+|+|++|+.+|..
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 468899999999999999965
No 36
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=47.28 E-value=22 Score=37.41 Aligned_cols=60 Identities=23% Similarity=0.398 Sum_probs=36.3
Q ss_pred eEEEEEEcCCCccEEEEEEEeCCCCceecccccceEE--eecCCccccCCChHHHHHHHHHHHHHHHh
Q 048388 69 SYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFV--QTKPGLSAYASDPQAAANSLASLLDKAQS 134 (477)
Q Consensus 69 ~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~--k~~pGLs~~~~~~~~~~~~l~~ll~~a~~ 134 (477)
+|.+.||+|+|++|+.+|.. +..++.... ..+. ...||- ...+|+...+.+..+++.+.+
T Consensus 26 ~~~lgIDiGtts~k~~l~d~--~G~il~~~~--~~~~~~~p~~g~--~e~dp~~~~~~i~~~i~~~~~ 87 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDG--NQKIAGVGQ--KEFKQHFPKSGW--VEHDPEEIWQTVVSTVKEAIE 87 (520)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSCEEEEEE--EECCCBCSSTTC--CEECHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCcceEEEEECC--CCCEEEEEE--EecccccCCCCc--EEECHHHHHHHHHHHHHHHHH
Confidence 58899999999999999853 333332110 0011 112332 235788877777777766644
No 37
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=46.03 E-value=43 Score=35.87 Aligned_cols=95 Identities=19% Similarity=0.263 Sum_probs=53.0
Q ss_pred ChHHH-HHHHHHHHHHHHhhCCCCCCCCccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccc
Q 048388 117 DPQAA-ANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEG 195 (477)
Q Consensus 117 ~~~~~-~~~l~~ll~~a~~~vp~~~~~~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg 195 (477)
.|+++ +..|..|.+.|+..+.. ..+.+.+--.|. ....+++++.++++. .++. .+++|+-..=|
T Consensus 111 ~~~ei~a~~L~~l~~~ae~~l~~---~v~~~VitVPa~---f~d~qr~a~~~A~~~-----AGl~----v~~li~EP~AA 175 (605)
T 2kho_A 111 APPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAY---FNDAQRQATKDAGRI-----AGLE----VKRIINEPTAA 175 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEEECTT---CCHHHHHHHHHHHHT-----TTCE----EEEEEEHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---CCcEEEEEECCC---CCHHHHHHHHHHHHH-----cCCc----eEEEecCHHHH
Confidence 45555 45777787878776532 234455544442 224566666555443 3452 35665533222
Q ss_pred hhhHHHHHHhhccCCCCCCceEEEEecCCCceeeEEee
Q 048388 196 SYQWVTINYLLGNLGKKYSNTVGVVDLGGGSVQMAYAI 233 (477)
Q Consensus 196 ~y~WvavNyllg~l~~~~~~t~gviDlGGgStQiaf~~ 233 (477)
++.|.+..- ....++.|+|+|||.+.++...
T Consensus 176 -----Alay~l~~~--~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 2kho_A 176 -----ALAYGLDKG--TGNRTIAVYDLGGGTFDISIIE 206 (605)
T ss_dssp -----HHHTTTTSS--SSEEEEEEEEECSSCEEEEEEE
T ss_pred -----HHHhhhccc--CCCCEEEEEECCCCeEEEEEEE
Confidence 233444321 1245688999999999998653
No 38
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=45.78 E-value=40 Score=34.77 Aligned_cols=63 Identities=17% Similarity=0.178 Sum_probs=37.3
Q ss_pred ceEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCcc----ccCCChHHHHHHHHHHHHHHHh
Q 048388 68 KSYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLS----AYASDPQAAANSLASLLDKAQS 134 (477)
Q Consensus 68 ~~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs----~~~~~~~~~~~~l~~ll~~a~~ 134 (477)
++|.+.||+|+|++|+.||..+.+ ++.... ....+..|+.. ....+|+...+.+..+++.+..
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~~g~--~~~~~~--~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~ 69 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARYERE--CRSLTL--REIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCA 69 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEEEGG--GTEEEE--EEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEecCCCceEEEEEecCc--cceEEE--EEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHh
Confidence 457789999999999999976532 222110 01111112211 1234788887888877776643
No 39
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=44.53 E-value=28 Score=36.11 Aligned_cols=61 Identities=20% Similarity=0.309 Sum_probs=34.8
Q ss_pred eEEEEEEcCCCccEEEEEEEeCCCCceecccccce-EEeecCCccccCCChHHHHHHHHHHHHHHHh
Q 048388 69 SYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLEL-FVQTKPGLSAYASDPQAAANSLASLLDKAQS 134 (477)
Q Consensus 69 ~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~-~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~~ 134 (477)
+|.+.||+|+|++|+.||.. +..++.... .+. .....||- ...+|+...+.+..+++.+.+
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~--~g~i~~~~~-~~~~~~~p~~g~--~e~d~~~~~~~i~~~i~~~~~ 63 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL--EGRPVAVAK-REFRQLYPKPGW--VEHDPLEIWETTLWAAREVLR 63 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT--TSCEEEEEE-EECCEECSSTTC--CEECHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEeeCCcceEEEEECC--CCCEEEEEE-EeeceecCCCCc--EeeCHHHHHHHHHHHHHHHHH
Confidence 47789999999999999853 333332110 000 01122332 234788877777777666543
No 40
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=43.06 E-value=22 Score=37.04 Aligned_cols=61 Identities=16% Similarity=0.349 Sum_probs=34.6
Q ss_pred eEEEEEEcCCCccEEEEEEEeCCCCceecccccceE-EeecCCccccCCChHHHHHHHHHHHHHHHh
Q 048388 69 SYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELF-VQTKPGLSAYASDPQAAANSLASLLDKAQS 134 (477)
Q Consensus 69 ~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~-~k~~pGLs~~~~~~~~~~~~l~~ll~~a~~ 134 (477)
+|.+.||+|+|++|+.+|.. +..++.... .+.- ....||- ...+|+...+.+..+++.+.+
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~--~g~~~~~~~-~~~~~~~p~~g~--~e~d~~~~~~~~~~~i~~~~~ 64 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR--ESNIHGIGQ-YEFPQHYPRPGW--VEHNPEEIWDAQLRAIKDAIQ 64 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCCEEEEEE-EECCCBCCSTTC--CEECHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecCCchhEEEEECC--CCCEEEEEE-eccceecCCCCc--EEECHHHHHHHHHHHHHHHHH
Confidence 47889999999999999853 333332110 0000 0112332 234788777666666665543
No 41
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=41.29 E-value=15 Score=38.87 Aligned_cols=22 Identities=9% Similarity=0.078 Sum_probs=18.8
Q ss_pred CCceEEEEEEcCCCccEEEEEE
Q 048388 66 LSKSYAVIFDAGSSGSRVHVYC 87 (477)
Q Consensus 66 ~~~~y~vvIDaGSsgsRl~Vy~ 87 (477)
.+++|.+.||+|++++|..||.
T Consensus 7 ~~~~~~lgID~GTts~Ka~l~d 28 (538)
T 4bc3_A 7 APRRCCLGWDFSTQQVKVVAVD 28 (538)
T ss_dssp --CCEEEEEEECSSEEEEEEEE
T ss_pred CCCCEEEEEEEcCcCEEEEEEC
Confidence 4567999999999999999996
No 42
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=39.95 E-value=31 Score=35.63 Aligned_cols=61 Identities=16% Similarity=0.152 Sum_probs=34.3
Q ss_pred EEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCCChHHHHHHHHHHHHHHHhh
Q 048388 71 AVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSV 135 (477)
Q Consensus 71 ~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~~~ 135 (477)
.+.||+|+|++|+.+|.. +..++...........-.||.. ..+|+...+.+..+++.+.+.
T Consensus 2 ~lgiDiGtt~~k~~l~d~--~g~~l~~~~~~~~~~~p~~g~~--e~d~~~~~~~i~~~i~~~~~~ 62 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE--QGEVVAAQTEKLTVSRPHPLWS--EQDPEQWWQATDRAMKALGDQ 62 (484)
T ss_dssp EEEEEECSSEEEEEEECT--TSCEEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCcccEEEEECC--CCCEEEEEEeccccccCCCCCE--eECHHHHHHHHHHHHHHHHHh
Confidence 467999999999999853 3333321100000011233322 247887777777777766443
No 43
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=38.26 E-value=1e+02 Score=29.34 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=41.8
Q ss_pred eEEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccCCChHHHHHHHHHHHHHHHhhCCCCCCCCcc-EE
Q 048388 69 SYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYASDPQAAANSLASLLDKAQSVVPQDLRPKTP-VK 147 (477)
Q Consensus 69 ~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~~~~~~~~~~l~~ll~~a~~~vp~~~~~~tp-i~ 147 (477)
+|.+.||+|.|.+|+-++.. +..++. ..+..+ . ....+++...+.+..+++.+.+..+.......+ -.
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~--~G~il~-------~~~~~~-~-~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~i 79 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHAS--DGTPLA-------MAEGGA-S-ALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAI 79 (305)
T ss_dssp CEEEEEEECSSCEEEEEEET--TCCEEE-------EEEESC-C-CGGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEE
T ss_pred CEEEEEEcCccceEEEEEcC--CCCEEE-------EEeCCC-C-CcccCHHHHHHHHHHHHHHHHHhcCCChhhhccceE
Confidence 38899999999999999853 223321 111111 1 112356667677777776655443211111101 14
Q ss_pred EEeehhhhc
Q 048388 148 VGATAGLRQ 156 (477)
Q Consensus 148 l~ATAGmR~ 156 (477)
.++.+|.-.
T Consensus 80 gig~pG~v~ 88 (305)
T 1zc6_A 80 GLGLSGVHN 88 (305)
T ss_dssp EEEESCCCT
T ss_pred EEEecCCCc
Confidence 567888644
No 44
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=37.31 E-value=1e+02 Score=33.56 Aligned_cols=95 Identities=16% Similarity=0.153 Sum_probs=53.2
Q ss_pred hHHH-HHHHHHHHHHHHhhCCCCCCCCccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccch
Q 048388 118 PQAA-ANSLASLLDKAQSVVPQDLRPKTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGS 196 (477)
Q Consensus 118 ~~~~-~~~l~~ll~~a~~~vp~~~~~~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~ 196 (477)
|+++ +..|..|.+.|...+.. ..+.+.+--.|..- ..+++.+.++++. .++. .+++|+-..=|
T Consensus 115 peei~a~~L~~lk~~ae~~lg~---~v~~~VITVPa~f~---~~qR~a~~~Aa~~-----AGl~----~~~li~EP~AA- 178 (675)
T 3d2f_A 115 ATQLAAMFIDKVKDTVKQDTKA---NITDVCIAVPPWYT---EEQRYNIADAARI-----AGLN----PVRIVNDVTAA- 178 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCS---CCCEEEEEECTTCC---HHHHHHHHHHHHH-----TTCE----EEEEEEHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CcceEEEEECCCCC---HHHHHHHHHHHHH-----cCCc----eEEEEcchHHH-
Confidence 5554 56677777777776542 23445544443322 3566666666654 3442 46777533222
Q ss_pred hhHHHHHHhhcc--CCC--CCCceEEEEecCCCceeeEEe
Q 048388 197 YQWVTINYLLGN--LGK--KYSNTVGVVDLGGGSVQMAYA 232 (477)
Q Consensus 197 y~WvavNyllg~--l~~--~~~~t~gviDlGGgStQiaf~ 232 (477)
++.|.+.+ +.. ....++.|+|+|||++.++..
T Consensus 179 ----Alaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~ 214 (675)
T 3d2f_A 179 ----GVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIM 214 (675)
T ss_dssp ----HHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEE
T ss_pred ----HHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEE
Confidence 22343322 211 123578899999999999865
No 45
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=37.18 E-value=30 Score=36.08 Aligned_cols=60 Identities=20% Similarity=0.356 Sum_probs=34.9
Q ss_pred eEEEEEEcCCCccEEEEEEEeCCCCceecccccceEE--eecCCccccCCChHHHHHHHHHHHHHHHh
Q 048388 69 SYAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFV--QTKPGLSAYASDPQAAANSLASLLDKAQS 134 (477)
Q Consensus 69 ~y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~--k~~pGLs~~~~~~~~~~~~l~~ll~~a~~ 134 (477)
+|.+.||+|+|++|+.||.. +..++.... . .+. ...||- ...+|+...+.+..+++.+.+
T Consensus 2 ~~~lgiDiGtts~k~~l~d~--~G~i~~~~~-~-~~~~~~p~~g~--~e~d~~~~~~~i~~~i~~~~~ 63 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDH--SGEIYSTGQ-L-EHDQIFPRAGW--VEHNPEQIWNNVREVVGLALT 63 (504)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSCEEEEEE-E-ECCCBCSSTTC--CEECHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCcceEEEEECC--CCCEEEEEE-E-ecceecCCCCc--eeECHHHHHHHHHHHHHHHHH
Confidence 37789999999999999853 333332110 0 011 112332 234788877777777666543
No 46
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=34.77 E-value=1e+02 Score=30.37 Aligned_cols=66 Identities=15% Similarity=0.107 Sum_probs=37.7
Q ss_pred CccEEEEeehhhhcCChhhHHHHHHHHHHHhhccCCcccCCCceEEccCCccchhhHHHHHHhhccCCCCCCceEEEEec
Q 048388 143 KTPVKVGATAGLRQLGVDASDRILQAVRDLLKYKSAFKSKPEWVTVLDGSQEGSYQWVTINYLLGNLGKKYSNTVGVVDL 222 (477)
Q Consensus 143 ~tpi~l~ATAGmR~l~~~~~~~il~~vr~~l~~~~~f~~~~~~v~IIsG~eEg~y~WvavNyllg~l~~~~~~t~gviDl 222 (477)
..|+.+--.+. .+..+++++.+.+-+.+ ++ . .+.++. |+..+ .|..|. .+..|+|+
T Consensus 100 ~~~vvit~p~~---~~~~~r~~~~e~~fe~~----g~--~--~~~~~~---e~~aa----a~a~g~------~~~lVvDi 155 (375)
T 2fxu_A 100 EHPTLLTEAPL---NPKANREKMTQIMFETF----NV--P--AMYVAI---QAVLS----LYASGR------TTGIVLDS 155 (375)
T ss_dssp GSCEEEEECTT---CCHHHHHHHHHHHHHTT----CC--S--EEEEEE---HHHHH----HHHTTC------SSEEEEEE
T ss_pred CCcEEEEeCCC---CcHHHHHHHHHHHHHhc----Cc--c--eEEEcc---chhee----eeecCC------CeEEEEEc
Confidence 35666544432 34566666666554432 22 1 455543 44433 344442 46789999
Q ss_pred CCCceeeEEe
Q 048388 223 GGGSVQMAYA 232 (477)
Q Consensus 223 GGgStQiaf~ 232 (477)
|||.|.|+-.
T Consensus 156 G~gtt~v~~v 165 (375)
T 2fxu_A 156 GDGVTHNVPI 165 (375)
T ss_dssp CSSCEEEEEE
T ss_pred CCCceEEeEe
Confidence 9999998744
No 47
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=33.40 E-value=1.8e+02 Score=27.88 Aligned_cols=91 Identities=13% Similarity=0.073 Sum_probs=46.1
Q ss_pred EEEEEEcCCCccEEEEEEEeCCCCceecccccceEEeecCCccccC-CChHHHHHHHHHHHHHHHhhCCCCCCCCccEEE
Q 048388 70 YAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQTKPGLSAYA-SDPQAAANSLASLLDKAQSVVPQDLRPKTPVKV 148 (477)
Q Consensus 70 y~vvIDaGSsgsRl~Vy~~~~~~~l~~i~~~~e~~~k~~pGLs~~~-~~~~~~~~~l~~ll~~a~~~vp~~~~~~tpi~l 148 (477)
|.+.||+|.|.+|+.++..+ ..++. ..+..+ .... .+++.+.+.+..+++.+.+..........--..
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~--g~i~~-------~~~~~~--~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gig 75 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSED--GKILA-------EADGLS--TNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLG 75 (347)
T ss_dssp EEEEEEECTTCEEEEEEETT--SCEEE-------EEEECC--CCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEE
T ss_pred EEEEEEcCccceEEEEEeCC--CCEEE-------EEeCCC--CCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEE
Confidence 88999999999999998543 23221 111211 1111 246666666666666554332111110112245
Q ss_pred EeehhhhcCChhhHHHHHHHHHHHh
Q 048388 149 GATAGLRQLGVDASDRILQAVRDLL 173 (477)
Q Consensus 149 ~ATAGmR~l~~~~~~~il~~vr~~l 173 (477)
++.+|.-. .++...+-+.+++.+
T Consensus 76 i~~pG~vd--~~~~~~l~~~l~~~~ 98 (347)
T 2ch5_A 76 LSLSGGDQ--EDAGRILIEELRDRF 98 (347)
T ss_dssp EEETTTTC--HHHHHHHHHHHHHHC
T ss_pred EeccCCCc--hHHHHHHHHHHHHhc
Confidence 67888644 333333434444443
No 48
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=32.16 E-value=35 Score=33.70 Aligned_cols=19 Identities=16% Similarity=0.146 Sum_probs=16.6
Q ss_pred ceEEEEecCCCceeeEEee
Q 048388 215 NTVGVVDLGGGSVQMAYAI 233 (477)
Q Consensus 215 ~t~gviDlGGgStQiaf~~ 233 (477)
.++.|+|||||.|.++...
T Consensus 190 ~~vlVvDIGgGTtDv~vi~ 208 (346)
T 2fsj_A 190 GYGVVIDVGSRTTDVLTIN 208 (346)
T ss_dssp SEEEEEEECSSCEEEEEEE
T ss_pred CcEEEEECCCCcEEEEEEE
Confidence 5679999999999999764
No 49
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=25.37 E-value=34 Score=36.69 Aligned_cols=19 Identities=26% Similarity=0.534 Sum_probs=0.0
Q ss_pred EEEEecCCCceeeEEeecc
Q 048388 217 VGVVDLGGGSVQMAYAISE 235 (477)
Q Consensus 217 ~gviDlGGgStQiaf~~~~ 235 (477)
+.+||||||||-++.....
T Consensus 409 vaiIDmGGGTTd~sVf~~G 427 (610)
T 2d0o_A 409 LAILDLGAGSTDASIINPK 427 (610)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred eEEEEeCCCcceEEEEcCC
No 50
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=25.16 E-value=35 Score=36.67 Aligned_cols=19 Identities=37% Similarity=0.627 Sum_probs=0.0
Q ss_pred EEEEecCCCceeeEEeecc
Q 048388 217 VGVVDLGGGSVQMAYAISE 235 (477)
Q Consensus 217 ~gviDlGGgStQiaf~~~~ 235 (477)
+.+||||||||-++.....
T Consensus 411 vaiIDmGgGTTd~sVf~~g 429 (607)
T 1nbw_A 411 LAILDLGAGSTDAAIVNAE 429 (607)
T ss_dssp EEEEEECSSEEEEEEECSS
T ss_pred eEEEEeCCCcceEEEEcCC
No 51
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=22.13 E-value=51 Score=32.25 Aligned_cols=20 Identities=25% Similarity=0.463 Sum_probs=17.1
Q ss_pred CceEEEEecCCCceeeEEee
Q 048388 214 SNTVGVVDLGGGSVQMAYAI 233 (477)
Q Consensus 214 ~~t~gviDlGGgStQiaf~~ 233 (477)
...+.+||+|||.|.++...
T Consensus 171 ~~~v~vvDiGggTtd~~v~~ 190 (329)
T 4apw_A 171 NKNVAVIDFGGLNMGFSLYR 190 (329)
T ss_dssp TCEEEEEEECSSCEEEEEEE
T ss_pred cCCEEEEEeCCCcEEEEEEE
Confidence 35789999999999999764
No 52
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=20.97 E-value=2.7e+02 Score=26.18 Aligned_cols=17 Identities=24% Similarity=0.202 Sum_probs=15.3
Q ss_pred EEEEEcCCCccEEEEEE
Q 048388 71 AVIFDAGSSGSRVHVYC 87 (477)
Q Consensus 71 ~vvIDaGSsgsRl~Vy~ 87 (477)
.+.||+|.|.+|+-++.
T Consensus 2 ~lgiDiGGT~~~~~l~d 18 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK 18 (291)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEEeCccceEEEEEe
Confidence 46799999999999986
Done!