BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048389
(566 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3U9R|B Chain B, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc), Beta Subunit
pdb|3U9S|B Chain B, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|D Chain D, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|F Chain F, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|H Chain H, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|J Chain J, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9S|L Chain L, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Coa Complex
pdb|3U9T|B Chain B, Crystal Structure Of P. Aeruginosa 3-methylcrotonyl-coa
Carboxylase (mcc) 750 Kd Holoenzyme, Free Enzyme
Length = 555
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/545 (60%), Positives = 421/545 (77%), Gaps = 6/545 (1%)
Query: 22 RALHLSVLPDAVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLP 81
R H+++L ++ S F N+ M V+ L++ + ++ GGG +A R+ +R KLL
Sbjct: 17 RGSHMAILHTQINPRSAEFAANAATMLEQVNALRTLLGRIHEGGGSAAQARHSARGKLLV 76
Query: 82 RERIDRLTDPGSSFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGT 141
RERI+RL DPGS FLELS LA HE+Y E + + GI+ GIG V G CM V ND TVKGGT
Sbjct: 77 RERINRLLDPGSPFLELSALAAHEVYGEEVAAAGIVAGIGRVEGVECMIVGNDATVKGGT 136
Query: 142 YFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAE 201
Y+P+T+KKHLRAQ IA + +LPCIYLVDSGGA LP+Q EVFPD+E+FGRIF+NQA MSA
Sbjct: 137 YYPLTVKKHLRAQAIALENRLPCIYLVDSGGANLPRQDEVFPDREHFGRIFFNQANMSAR 196
Query: 202 GIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAA 261
GIPQIA+V+GSCTAGGAY+PAM+DE+VMV+ TIFLAGPPLVKAATGE +SAE+LGGA
Sbjct: 197 GIPQIAVVMGSCTAGGAYVPAMSDETVMVREQATIFLAGPPLVKAATGEVVSAEELGGAD 256
Query: 262 VHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYDVKELY 321
VHCK SGV+D++A+D+ H L++ R + NL+ +QG++ Q P + PLY +ELY
Sbjct: 257 VHCKVSGVADHYAEDDDHALAIARRCVANLNWR-KQGQL---QCRAP--RAPLYPAEELY 310
Query: 322 SIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNNGILFH 381
+ PAD KQ +D+R VIAR+VDGSEFDEFK L+GTTLV GFA + G P+ I+ NNGILF
Sbjct: 311 GVIPADSKQPYDVREVIARLVDGSEFDEFKALFGTTLVCGFAHLHGYPIAILANNGILFA 370
Query: 382 ESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVT 441
E+A KGAHFIEL QR IPL+FLQNITGFMVG + EA GIAK GAK+V AV+CA+VPK T
Sbjct: 371 EAAQKGAHFIELACQRGIPLLFLQNITGFMVGQKYEAGGIAKHGAKLVTAVACARVPKFT 430
Query: 442 IIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWT 501
+++GGSFGAGNY MCGRAY P F+++WPNARI VMGG QAAGVL+QV++++ ++ G +
Sbjct: 431 VLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGGEQAAGVLAQVKREQAERAGQQLG 490
Query: 502 KQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIIDPADTRKIIGFCISAALNRPVEDTKY 561
+EE KA ++E YE +G+ YYS+ARLWDDG+IDPA TR+++ +SAALN P+E T +
Sbjct: 491 VEEEAKIKAPILEQYEHQGHPYYSSARLWDDGVIDPAQTREVLALALSAALNAPIEPTAF 550
Query: 562 GVFRM 566
GVFRM
Sbjct: 551 GVFRM 555
>pdb|1ON3|A Chain A, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON3|B Chain B, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON3|C Chain C, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON3|D Chain D, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON3|E Chain E, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON3|F Chain F, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (With
Methylmalonyl-Coenzyme A And Methylmalonic Acid Bound)
pdb|1ON9|A Chain A, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (with
Hydrolyzed Methylmalonyl-coenzyme A Bound)
pdb|1ON9|B Chain B, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (with
Hydrolyzed Methylmalonyl-coenzyme A Bound)
pdb|1ON9|C Chain C, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (with
Hydrolyzed Methylmalonyl-coenzyme A Bound)
pdb|1ON9|D Chain D, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (with
Hydrolyzed Methylmalonyl-coenzyme A Bound)
pdb|1ON9|E Chain E, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (with
Hydrolyzed Methylmalonyl-coenzyme A Bound)
pdb|1ON9|F Chain F, Transcarboxylase 12s Crystal Structure: Hexamer Assembly
And Substrate Binding To A Multienzyme Core (with
Hydrolyzed Methylmalonyl-coenzyme A Bound)
Length = 523
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 268/514 (52%), Gaps = 36/514 (7%)
Query: 44 SQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAG 103
+ M+G V +L Q + GGGE V++ S+ K RER++ L DP SF E+
Sbjct: 9 ASTMEGRVEQLAEQRQVIEAGGGERRVEKQHSQGKQTARERLNNLLDP-HSFDEVGAFRK 67
Query: 104 HE-----LYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAA 158
H + + + + G++TG G + GR + D TV GG+ K + E A
Sbjct: 68 HRTTLFGMDKAVVPADGVVTGRGTILGRPVHAASQDFTVMGGSAGETQSTKVVETMEQAL 127
Query: 159 QCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGA 218
P ++ DSGGA + + + +G++F+ +S +PQIA++ G C G +
Sbjct: 128 LTGTPFLFFYDSGGARIQEGIDSL---SGYGKMFFANVKLSGV-VPQIAIIAGPCAGGAS 183
Query: 219 YIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDEL 278
Y PA+ D +M K +F+ GP ++K+ TGE+++A++LGGA H SG + A+D+
Sbjct: 184 YSPALTDFIIMTK-KAHMFITGPQVIKSVTGEDVTADELGGAEAHMAISGNIHFVAEDDD 242
Query: 279 HGLSLGRNIIKNLHMAGRQGE--INGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRS 336
+ + ++ L + +N +++P EL I P D K+ +D+R
Sbjct: 243 AAELIAKKLLSFLPQNNTEEASFVNPNNDVSPN--------TELRDIVPIDGKKGYDVRD 294
Query: 337 VIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFI 391
VIA+IVD ++ E K Y T LVT FA++ G+ VGI+ N +G L ++ K A F+
Sbjct: 295 VIAKIVDWGDYLEVKAGYATNLVTAFARVNGRSVGIVANQPSVMSGCLDINASDKAAEFV 354
Query: 392 ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAG 451
C IPLV L ++ GF+ G + E GI + GAKM+ A S A VPK+T+++ ++G
Sbjct: 355 NFCDSFNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGS 414
Query: 452 NYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAK 511
AMC R + ++ WP+A I+VMG AA V+ + E I+ + M +A+
Sbjct: 415 YLAMCNRDLGADAVYAWPSAEIAVMGAEGAANVIFRKE--------IKAADDPDAM-RAE 465
Query: 512 VVEAYEKEGNA-YYSTARLWDDGIIDPADTRKII 544
+E Y+ N Y + AR D +IDPADTR+ I
Sbjct: 466 KIEEYQNAFNTPYVAAARGQVDDVIDPADTRRKI 499
>pdb|1VRG|A Chain A, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
pdb|1VRG|B Chain B, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
pdb|1VRG|C Chain C, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
pdb|1VRG|D Chain D, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
pdb|1VRG|E Chain E, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
pdb|1VRG|F Chain F, Crystal Structure Of Propionyl-coa Carboxylase, Beta
Subunit (tm0716) From Thermotoga Maritima At 2.30 A
Resolution
Length = 527
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/509 (31%), Positives = 264/509 (51%), Gaps = 31/509 (6%)
Query: 47 MQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHE- 105
++ + EL+ +++ GGG V++ KL ER++ L DPG+ F+E+ + H
Sbjct: 15 LRDKIEELKKIEKEIEQGGGPEKVEKQHRAGKLTAWERLELLLDPGT-FVEIDKFVEHRN 73
Query: 106 ----LYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCK 161
L + L G+ITG+G ++GR + D TV GG+ KK ++ ++A +
Sbjct: 74 TYFGLDKVKLPRDGVITGVGEINGRKVAVFSQDFTVXGGSLGEXHAKKIVKLLDLALKXG 133
Query: 162 LPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIP 221
+P I + DSGGA + + + +G IF + S +PQI ++ G C G Y P
Sbjct: 134 IPVIGINDSGGARIQEGVDAL---AGYGEIFLRNTLASGV-VPQITVIAGPCAGGAVYSP 189
Query: 222 AMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGL 281
A+ D V V F+ GP ++KA TGEEIS EDLGGA VH + SG + + A ++
Sbjct: 190 ALTDFIVXVDQTARXFITGPNVIKAVTGEEISQEDLGGAXVHNQKSGNAHFLADNDEKAX 249
Query: 282 SLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARI 341
SL R ++ ++ E ++ + + P +++ I P + + +D+R VI R+
Sbjct: 250 SLVRTLLS--YLPSNNAEEPPVEDPDTSLETP----EDILDILPDNPNKGYDVRDVIKRV 303
Query: 342 VDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQ 396
VD EF E + + +V GFA+I G+ VGI+ N G+L +S+ K A FI
Sbjct: 304 VDHGEFFEVQPYFAKNIVIGFARIQGKTVGIVANQPSVLAGVLDIDSSDKAARFIRFLDA 363
Query: 397 RKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMC 456
IP++ + G++ G E GI + GAK++ A S A VPK+T+I+ ++G A
Sbjct: 364 FNIPILTFVDTPGYLPGVAQEHGGIIRHGAKLLYAYSEATVPKITVILRKAYGGAYIAXG 423
Query: 457 GRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAY 516
+ + + WP+A I+V G AA ++ + E IE + EE + K++E Y
Sbjct: 424 SKHLGADXVLAWPSAEIAVXGPEGAANIIFKRE--------IEASSNPEET-RRKLIEEY 474
Query: 517 EKE-GNAYYSTARLWDDGIIDPADTRKII 544
+++ N Y + +R + D +IDP +TRK I
Sbjct: 475 KQQFANPYIAASRGYVDXVIDPRETRKYI 503
>pdb|3N6R|B Chain B, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|D Chain D, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|F Chain F, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|H Chain H, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|J Chain J, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
pdb|3N6R|L Chain L, Crystal Structure Of The Holoenzyme Of Propionyl-coa
Carboxylase (pcc)
Length = 531
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 264/526 (50%), Gaps = 32/526 (6%)
Query: 42 RNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQL 101
R S +M+ ++ +L+ GGG+ + R KL RER+D L D GS F E
Sbjct: 17 RGSHMMKDILEQLEDRRAAARLGGGQKRIDAQHGRGKLTARERVDLLLDEGS-FEEFDMF 75
Query: 102 AGHELYEETLQS-----GGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEI 156
H + +Q G++TG G ++GR+ + D TV GG+ KK + ++
Sbjct: 76 VTHRCTDFNMQDQKPAGDGVVTGWGTINGRVVYVFSQDFTVLGGSVSETHSKKICKIMDM 135
Query: 157 AAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAG 216
A Q P I + DSGGA + + + +G +F + IM++ +PQI++++G C G
Sbjct: 136 AMQNGAPVIGINDSGGARIQEGVDSL---AGYGEVF-QRNIMASGVVPQISMIMGPCAGG 191
Query: 217 GAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQD 276
Y PAM D MVK + +F+ GP +VK T E++SAE+LGGA H + S V+D ++
Sbjct: 192 AVYSPAMTDFIFMVKDSSYMFVTGPDVVKTVTNEQVSAEELGGATTHTRKSSVADAAFEN 251
Query: 277 ELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRS 336
++ L+ R ++ L + R+ + P + +P L ++ P + +D++
Sbjct: 252 DVEALAEVRRLVDFLPLNNREK-----PPVRPFFDDPDRIEPSLDTLVPDNPNTPYDMKE 306
Query: 337 VIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFI 391
+I ++ D +F E ++ + ++TGF ++ G+ VG++ N G L +S+ K A F+
Sbjct: 307 LIHKLADEGDFYEIQEEFAKNIITGFIRLEGRTVGVVANQPLVLAGCLDIDSSRKAARFV 366
Query: 392 ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAG 451
C +IPL+ L ++ GF+ G+ E G+ K GAK++ A A VP VT+I ++G
Sbjct: 367 RFCDAFEIPLLTLIDVPGFLPGTSQEYGGVIKHGAKLLYAYGEATVPMVTVITRKAYGGA 426
Query: 452 NYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAK 511
M + +F + WP A ++VMG A ++ + + +K + T EE F
Sbjct: 427 YVVMSSKHLRADFNYAWPTAEVAVMGAKGATEIIHRGDLGDPEKIA-QHTADYEERF--- 482
Query: 512 VVEAYEKEGNAYYSTARLWDDGIIDPADTRKIIGFCISAALNRPVE 557
N + ++ R + D +I P TRK + ++ N+ V+
Sbjct: 483 --------ANPFVASERGFVDEVIQPRSTRKRVARAFASLRNKSVQ 520
>pdb|1X0U|A Chain A, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|B Chain B, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|C Chain C, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|D Chain D, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|E Chain E, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
pdb|1X0U|F Chain F, Crystal Structure Of The Carboxyl Transferase Subunit Of
Putative Pcc Of Sulfolobus Tokodaii
Length = 522
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 258/509 (50%), Gaps = 29/509 (5%)
Query: 47 MQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHE- 105
++ L+ EL+ +K GGG+ ++ S+ KL RER+ L D G F E+ A
Sbjct: 8 VEKLIEELRQLKEKAYKGGGDERIQFQHSKGKLTARERLALLFDDGK-FNEIMTFATTRA 66
Query: 106 ----LYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCK 161
L ++ G++TG G V GR A D TV GG+ K +RA E+A +
Sbjct: 67 TEFGLDKQRFYGDGVVTGWGKVDGRTVFAYAQDFTVLGGSLGETHANKIVRAYELALKVG 126
Query: 162 LPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIP 221
P + + DSGGA + + A E +G +F +M++ IPQI ++ G G Y P
Sbjct: 127 APVVGINDSGGARIQEGALSL---EGYGAVF-KMNVMASGVIPQITIMAGPAAGGAVYSP 182
Query: 222 AMADESVMVKGNGT-IFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHG 280
A+ D +M+KG+ +F+ GP + K GEE+S +DLGGA VH SGV + E
Sbjct: 183 ALTDFIIMIKGDAYYMFVTGPEITKVVLGEEVSFQDLGGAVVHATKSGVVHFMVDSEQEA 242
Query: 281 LSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIAR 340
++L + ++ L + E +P + D + I P D + +++R +I +
Sbjct: 243 INLTKRLLSYLP-SNNMEEPPYIDTGDPADR----DATGVEQIVPNDAAKPYNMREIIYK 297
Query: 341 IVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCT 395
IVD EF E K + ++ GFA+I G VGI+ NN G + ++A K A FI C
Sbjct: 298 IVDNGEFLEVHKHWAQNIIVGFARIAGNVVGIVANNPEEFGGSIDIDAADKAARFIRFCD 357
Query: 396 QRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAM 455
IPL+ L + G++ G+ E GI + GAKM+ A + A VPK+T+IV S+G + AM
Sbjct: 358 AFNIPLISLVDTPGYVPGTDQEYKGIIRHGAKMLYAFAEATVPKITVIVRKSYGGAHIAM 417
Query: 456 CGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEA 515
++ + ++ WP A I+V G A +L + E I+ +++ K ++ E
Sbjct: 418 SIKSLGADLVYAWPTAEIAVTGPEGAVRILYRKE--------IQQASNPDDVLKQRIAEY 469
Query: 516 YEKEGNAYYSTARLWDDGIIDPADTRKII 544
+ N Y++ + D +I+P DTR++I
Sbjct: 470 RKLFANPYWAAEKGLVDDVIEPKDTRRVI 498
>pdb|1XNW|A Chain A, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #2, Mutant D422i
pdb|1XNW|B Chain B, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #2, Mutant D422i
pdb|1XNW|C Chain C, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #2, Mutant D422i
pdb|1XNW|D Chain D, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #2, Mutant D422i
pdb|1XNW|E Chain E, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #2, Mutant D422i
pdb|1XNW|F Chain F, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #2, Mutant D422i
Length = 530
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 256/509 (50%), Gaps = 31/509 (6%)
Query: 49 GLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE 108
G +++L+ I++ G AV++ ++ KL RERID L D GS F+EL + A H
Sbjct: 16 GKLADLRRRIEEATHAGSARAVEKQHAKGKLTARERIDLLLDEGS-FVELDEFARHRSTN 74
Query: 109 ETLQSG-----GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLP 163
L + G++TG G V GR + D TV GG + +K ++ + A + P
Sbjct: 75 FGLDANRPYGDGVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCP 134
Query: 164 CIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAM 223
+ + DSGGA + E +G IF S IPQI+LV+G C G Y PA+
Sbjct: 135 VVGINDSGGARI---QEGVASLGAYGEIFRRNTHASGV-IPQISLVVGPCAGGAVYSPAI 190
Query: 224 ADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSL 283
D +VMV +F+ GP ++K TGE++ E+LGGA H TSGV+ + A DE +
Sbjct: 191 TDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEY 250
Query: 284 GRNIIKNLHMAGRQGEINGFQNINPEYKEPLY--DVKELYSIAPADLKQSFDIRSVIARI 341
+ ++ L + E F PE + + EL +I P Q +D+ SVI +
Sbjct: 251 VKQLLSYL-PSNNLSEPPAF----PEEADLAVTDEDAELDTIVPDSANQPYDMHSVIEHV 305
Query: 342 VDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQ 396
+D +EF E + L+ ++TGF ++ G+PVGI+ N G L ++ K A F+ C
Sbjct: 306 LDDAEFFETQPLFAPNILTGFGRVEGRPVGIVANQPMQFAGCLDITASEKAARFVRTCDA 365
Query: 397 RKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMC 456
+P++ ++ GF+ G E +GI + GAK++ A + A VP +T+I +FG M
Sbjct: 366 FNVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYIVMG 425
Query: 457 GRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAY 516
+ + WP A+I+VMG A +L ++ I + E +A++++ Y
Sbjct: 426 SKHLGADLNLAWPTAQIAVMGAQGAVNIL--------HRRTIADAGDDAEATRARLIQEY 477
Query: 517 EKE-GNAYYSTARLWDDGIIDPADTRKII 544
E N Y + R + D +I P+DTR+ I
Sbjct: 478 EDALLNPYTAAERGYVDAVIMPSDTRRHI 506
>pdb|3IAV|A Chain A, Propionyl-Coa Carboxylase Beta Subunit, D422v
pdb|3IAV|B Chain B, Propionyl-Coa Carboxylase Beta Subunit, D422v
Length = 530
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 256/509 (50%), Gaps = 31/509 (6%)
Query: 49 GLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE 108
G +++L+ I++ G AV++ ++ KL RERID L D GS F+EL + A H
Sbjct: 16 GKLADLRRRIEEATHAGSARAVEKQHAKGKLTARERIDLLLDEGS-FVELDEFARHRSTN 74
Query: 109 ETLQSG-----GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLP 163
L + G++TG G V GR + D TV GG + +K ++ + A + P
Sbjct: 75 FGLDANRPYGDGVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCP 134
Query: 164 CIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAM 223
+ + DSGGA + E +G IF S IPQI+LV+G C G Y PA+
Sbjct: 135 VVGINDSGGARI---QEGVASLGAYGEIFRRNTHASGV-IPQISLVVGPCAGGAVYSPAI 190
Query: 224 ADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSL 283
D +VMV +F+ GP ++K TGE++ E+LGGA H TSGV+ + A DE +
Sbjct: 191 TDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEY 250
Query: 284 GRNIIKNLHMAGRQGEINGFQNINPEYKEPLY--DVKELYSIAPADLKQSFDIRSVIARI 341
+ ++ L + E F PE + + EL +I P Q +D+ SVI +
Sbjct: 251 VKQLLSYL-PSNNLSEPPAF----PEEADLAVTDEDAELDTIVPDSANQPYDMHSVIEHV 305
Query: 342 VDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQ 396
+D +EF E + L+ ++TGF ++ G+PVGI+ N G L ++ K A F+ C
Sbjct: 306 LDDAEFFETQPLFAPNILTGFGRVEGRPVGIVANQPMQFAGCLDITASEKAARFVRTCDA 365
Query: 397 RKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMC 456
+P++ ++ GF+ G E +GI + GAK++ A + A VP +T+I +FG M
Sbjct: 366 FNVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYVVMG 425
Query: 457 GRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAY 516
+ + WP A+I+VMG A +L ++ I + E +A++++ Y
Sbjct: 426 SKHLGADLNLAWPTAQIAVMGAQGAVNIL--------HRRTIADAGDDAEATRARLIQEY 477
Query: 517 EKE-GNAYYSTARLWDDGIIDPADTRKII 544
E N Y + R + D +I P+DTR+ I
Sbjct: 478 EDALLNPYTAAERGYVDAVIMPSDTRRHI 506
>pdb|3MFM|C Chain C, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
pdb|3MFM|F Chain F, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
pdb|3MFM|A Chain A, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
pdb|3MFM|B Chain B, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
pdb|3MFM|D Chain D, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
pdb|3MFM|E Chain E, Crystal Structures And Mutational Analyses Of Acyl-Coa
Carboxylase Subunit Of Streptomyces Coelicolor
Length = 530
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 256/509 (50%), Gaps = 31/509 (6%)
Query: 49 GLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE 108
G +++L+ I++ G AV++ ++ KL RERID L D GS F+EL + A H
Sbjct: 16 GKLADLRRRIEEATHAGSARAVEKQHAKGKLTARERIDLLLDEGS-FVELDEFARHRSTN 74
Query: 109 ETLQSG-----GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLP 163
L + G++TG G V GR + D TV GG + +K ++ + A + P
Sbjct: 75 FGLDANRPYGDGVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCP 134
Query: 164 CIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAM 223
+ + DSGGA + E +G IF S IPQI+LV+G C G Y PA+
Sbjct: 135 VVGINDSGGARI---QEGVASLGAYGEIFRRNTHASGV-IPQISLVVGPCAGGAVYSPAI 190
Query: 224 ADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSL 283
D +VMV +F+ GP ++K TGE++ E+LGGA H TSGV+ + A DE +
Sbjct: 191 TDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEY 250
Query: 284 GRNIIKNLHMAGRQGEINGFQNINPEYKEPLY--DVKELYSIAPADLKQSFDIRSVIARI 341
+ ++ L + E F PE + + EL +I P Q +D+ SVI +
Sbjct: 251 VKQLLSYL-PSNNLSEPPAF----PEEADLAVTDEDAELDTIVPDSANQPYDMHSVIEHV 305
Query: 342 VDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQ 396
+D +EF E + L+ ++TGF ++ G+PVGI+ N G L ++ K A F+ C
Sbjct: 306 LDDAEFFETQPLFAPNILTGFGRVEGRPVGIVANQPMQFAGCLDITASEKAARFVRTCDA 365
Query: 397 RKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMC 456
+P++ ++ GF+ G E +GI + GAK++ A + A VP +T+I +FG M
Sbjct: 366 FNVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYNVMG 425
Query: 457 GRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAY 516
+ + WP A+I+VMG A +L ++ I + E +A++++ Y
Sbjct: 426 SKHLGADLNLAWPTAQIAVMGAQGAVNIL--------HRRTIADAGDDAEATRARLIQEY 477
Query: 517 EKE-GNAYYSTARLWDDGIIDPADTRKII 544
E N Y + R + D +I P+DTR+ I
Sbjct: 478 EDALLNPYTAAERGYVDAVIMPSDTRRHI 506
>pdb|3IB9|A Chain A, Propionyl-Coa Carboxylase Beta Subunit, D422l
pdb|3IB9|B Chain B, Propionyl-Coa Carboxylase Beta Subunit, D422l
Length = 530
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 256/509 (50%), Gaps = 31/509 (6%)
Query: 49 GLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE 108
G +++L+ I++ G AV++ ++ KL RERID L D GS F+EL + A H
Sbjct: 16 GKLADLRRRIEEATHAGSARAVEKQHAKGKLTARERIDLLLDEGS-FVELDEFARHRSTN 74
Query: 109 ETLQSG-----GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLP 163
L + G++TG G V GR + D TV GG + +K ++ + A + P
Sbjct: 75 FGLDANRPYGDGVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCP 134
Query: 164 CIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAM 223
+ + DSGGA + E +G IF S IPQI+LV+G C G Y PA+
Sbjct: 135 VVGINDSGGARI---QEGVASLGAYGEIFRRNTHASGV-IPQISLVVGPCAGGAVYSPAI 190
Query: 224 ADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSL 283
D +VMV +F+ GP ++K TGE++ E+LGGA H TSGV+ + A DE +
Sbjct: 191 TDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEY 250
Query: 284 GRNIIKNLHMAGRQGEINGFQNINPEYKEPLY--DVKELYSIAPADLKQSFDIRSVIARI 341
+ ++ L + E F PE + + EL +I P Q +D+ SVI +
Sbjct: 251 VKQLLSYL-PSNNLSEPPAF----PEEADLAVTDEDAELDTIVPDSANQPYDMHSVIEHV 305
Query: 342 VDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQ 396
+D +EF E + L+ ++TGF ++ G+PVGI+ N G L ++ K A F+ C
Sbjct: 306 LDDAEFFETQPLFAPNILTGFGRVEGRPVGIVANQPMQFAGCLDITASEKAARFVRTCDA 365
Query: 397 RKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMC 456
+P++ ++ GF+ G E +GI + GAK++ A + A VP +T+I +FG M
Sbjct: 366 FNVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYLVMG 425
Query: 457 GRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAY 516
+ + WP A+I+VMG A +L ++ I + E +A++++ Y
Sbjct: 426 SKHLGADLNLAWPTAQIAVMGAQGAVNIL--------HRRTIADAGDDAEATRARLIQEY 477
Query: 517 EKE-GNAYYSTARLWDDGIIDPADTRKII 544
E N Y + R + D +I P+DTR+ I
Sbjct: 478 EDALLNPYTAAERGYVDAVIMPSDTRRHI 506
>pdb|3IBB|A Chain A, Propionyl-Coa Carboxylase Beta Subunit, D422a
pdb|3IBB|B Chain B, Propionyl-Coa Carboxylase Beta Subunit, D422a
pdb|3IBB|C Chain C, Propionyl-Coa Carboxylase Beta Subunit, D422a
pdb|3IBB|D Chain D, Propionyl-Coa Carboxylase Beta Subunit, D422a
pdb|3IBB|E Chain E, Propionyl-Coa Carboxylase Beta Subunit, D422a
pdb|3IBB|F Chain F, Propionyl-Coa Carboxylase Beta Subunit, D422a
Length = 530
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 256/509 (50%), Gaps = 31/509 (6%)
Query: 49 GLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE 108
G +++L+ I++ G AV++ ++ KL RERID L D GS F+EL + A H
Sbjct: 16 GKLADLRRRIEEATHAGSARAVEKQHAKGKLTARERIDLLLDEGS-FVELDEFARHRSTN 74
Query: 109 ETLQSG-----GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLP 163
L + G++TG G V GR + D TV GG + +K ++ + A + P
Sbjct: 75 FGLDANRPYGDGVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCP 134
Query: 164 CIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAM 223
+ + DSGGA + E +G IF S IPQI+LV+G C G Y PA+
Sbjct: 135 VVGINDSGGARI---QEGVASLGAYGEIFRRNTHASGV-IPQISLVVGPCAGGAVYSPAI 190
Query: 224 ADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSL 283
D +VMV +F+ GP ++K TGE++ E+LGGA H TSGV+ + A DE +
Sbjct: 191 TDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEY 250
Query: 284 GRNIIKNLHMAGRQGEINGFQNINPEYKEPLY--DVKELYSIAPADLKQSFDIRSVIARI 341
+ ++ L + E F PE + + EL +I P Q +D+ SVI +
Sbjct: 251 VKQLLSYL-PSNNLSEPPAF----PEEADLAVTDEDAELDTIVPDSANQPYDMHSVIEHV 305
Query: 342 VDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQ 396
+D +EF E + L+ ++TGF ++ G+PVGI+ N G L ++ K A F+ C
Sbjct: 306 LDDAEFFETQPLFAPNILTGFGRVEGRPVGIVANQPMQFAGCLDITASEKAARFVRTCDA 365
Query: 397 RKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMC 456
+P++ ++ GF+ G E +GI + GAK++ A + A VP +T+I +FG M
Sbjct: 366 FNVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYAVMG 425
Query: 457 GRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAY 516
+ + WP A+I+VMG A +L ++ I + E +A++++ Y
Sbjct: 426 SKHLGADLNLAWPTAQIAVMGAQGAVNIL--------HRRTIADAGDDAEATRARLIQEY 477
Query: 517 EKE-GNAYYSTARLWDDGIIDPADTRKII 544
E N Y + R + D +I P+DTR+ I
Sbjct: 478 EDALLNPYTAAERGYVDAVIMPSDTRRHI 506
>pdb|1XNV|A Chain A, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #1
pdb|1XNV|B Chain B, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #1
pdb|1XNY|A Chain A, Biotin And Propionyl-coa Bound To Acyl-coa Carboxylase
Beta Subunit From S. Coelicolor (pccb)
pdb|1XNY|B Chain B, Biotin And Propionyl-coa Bound To Acyl-coa Carboxylase
Beta Subunit From S. Coelicolor (pccb)
pdb|1XO6|A Chain A, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #3
pdb|1XO6|B Chain B, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #3
pdb|1XO6|C Chain C, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #3
pdb|1XO6|D Chain D, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #3
pdb|1XO6|E Chain E, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #3
pdb|1XO6|F Chain F, Acyl-Coa Carboxylase Beta Subunit From S. Coelicolor
(Pccb), Apo Form #3
Length = 530
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 256/509 (50%), Gaps = 31/509 (6%)
Query: 49 GLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE 108
G +++L+ I++ G AV++ ++ KL RERID L D GS F+EL + A H
Sbjct: 16 GKLADLRRRIEEATHAGSARAVEKQHAKGKLTARERIDLLLDEGS-FVELDEFARHRSTN 74
Query: 109 ETLQSG-----GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLP 163
L + G++TG G V GR + D TV GG + +K ++ + A + P
Sbjct: 75 FGLDANRPYGDGVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCP 134
Query: 164 CIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAM 223
+ + DSGGA + E +G IF S IPQI+LV+G C G Y PA+
Sbjct: 135 VVGINDSGGARI---QEGVASLGAYGEIFRRNTHASGV-IPQISLVVGPCAGGAVYSPAI 190
Query: 224 ADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSL 283
D +VMV +F+ GP ++K TGE++ E+LGGA H TSGV+ + A DE +
Sbjct: 191 TDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEY 250
Query: 284 GRNIIKNLHMAGRQGEINGFQNINPEYKEPLY--DVKELYSIAPADLKQSFDIRSVIARI 341
+ ++ L + E F PE + + EL +I P Q +D+ SVI +
Sbjct: 251 VKQLLSYL-PSNNLSEPPAF----PEEADLAVTDEDAELDTIVPDSANQPYDMHSVIEHV 305
Query: 342 VDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQ 396
+D +EF E + L+ ++TGF ++ G+PVGI+ N G L ++ K A F+ C
Sbjct: 306 LDDAEFFETQPLFAPNILTGFGRVEGRPVGIVANQPMQFAGCLDITASEKAARFVRTCDA 365
Query: 397 RKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMC 456
+P++ ++ GF+ G E +GI + GAK++ A + A VP +T+I +FG M
Sbjct: 366 FNVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYDVMG 425
Query: 457 GRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAY 516
+ + WP A+I+VMG A +L ++ I + E +A++++ Y
Sbjct: 426 SKHLGADLNLAWPTAQIAVMGAQGAVNIL--------HRRTIADAGDDAEATRARLIQEY 477
Query: 517 EKE-GNAYYSTARLWDDGIIDPADTRKII 544
E N Y + R + D +I P+DTR+ I
Sbjct: 478 EDALLNPYTAAERGYVDAVIMPSDTRRHI 506
>pdb|2A7S|A Chain A, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
pdb|2A7S|B Chain B, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
pdb|2A7S|C Chain C, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
pdb|2A7S|D Chain D, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
pdb|2A7S|E Chain E, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
pdb|2A7S|F Chain F, Crystal Structure Of The Acyl-Coa Carboxylase, Accd5, From
Mycobacterium Tuberculosis
Length = 548
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 273/547 (49%), Gaps = 35/547 (6%)
Query: 17 NSIRTRALHLSVLPDAVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSR 76
S+ R+ H + +R++E + + G ++EL ++ L GE AV++ ++
Sbjct: 2 TSVTDRSAH------SAERSTEHTI-DIHTTAGKLAELHKRREESLHPVGEDAVEKVHAK 54
Query: 77 NKLLPRERIDRLTDPGSSFLELSQLAGHE-----LYEETLQSGGIITGIGPVHGR-LCMF 130
KL RERI L D SF+EL LA H L E+ G++TG G + GR +C+F
Sbjct: 55 GKLTARERIYALLDE-DSFVELDALAKHRSTNFNLGEKRPLGDGVVTGYGTIDGRDVCIF 113
Query: 131 VANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGR 190
+ D TV GG+ + +K ++ QE+A + P I + D GA + E + R
Sbjct: 114 -SQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGARI---QEGVVSLGLYSR 169
Query: 191 IFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGE 250
IF N I+++ IPQI+L++G+ G Y PA+ D +MV +F+ GP ++K TGE
Sbjct: 170 IFRNN-ILASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFITGPDVIKTVTGE 228
Query: 251 EISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPE- 309
E++ E+LGGA H SG + Y A E R ++ L + +Q P
Sbjct: 229 EVTMEELGGAHTHMAKSGTAHYAASGEQDAFDYVRELLSYL-PPNNSTDAPRYQAAAPTG 287
Query: 310 -YKEPLYDVK-ELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFG 367
+E L D EL ++ P Q +D+ VI R++D EF E + Y +V GF +I G
Sbjct: 288 PIEENLTDEDLELDTLIPDSPNQPYDMHEVITRLLD-DEFLEIQAGYAQNIVVGFGRIDG 346
Query: 368 QPVGIIGNN-----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIA 422
+PVGI+ N G L ++ K A F+ C IP+V L ++ GF+ G+ E NGI
Sbjct: 347 RPVGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 406
Query: 423 KAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAA 482
+ GAK++ A A VPK+T+I ++G M + + WP A+I+VMG + A
Sbjct: 407 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 466
Query: 483 GVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKE-GNAYYSTARLWDDGIIDPADTR 541
G + + + + G + K + ++ + YE N Y + R + D +I P+ TR
Sbjct: 467 GFVYRQQLAEAAANGEDIDK-----LRLRLQQEYEDTLVNPYVAAERGYVDAVIPPSHTR 521
Query: 542 KIIGFCI 548
IG +
Sbjct: 522 GYIGTAL 528
>pdb|2BZR|A Chain A, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa
Carboxylase Beta-Subunit From Mycobacterium Tuberculosis
pdb|2BZR|B Chain B, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa
Carboxylase Beta-Subunit From Mycobacterium Tuberculosis
pdb|2BZR|C Chain C, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa
Carboxylase Beta-Subunit From Mycobacterium Tuberculosis
pdb|2BZR|D Chain D, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa
Carboxylase Beta-Subunit From Mycobacterium Tuberculosis
pdb|2BZR|E Chain E, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa
Carboxylase Beta-Subunit From Mycobacterium Tuberculosis
pdb|2BZR|F Chain F, Crystal Structure Of Accd5 (Rv3280), An Acyl-Coa
Carboxylase Beta-Subunit From Mycobacterium Tuberculosis
Length = 548
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 272/547 (49%), Gaps = 35/547 (6%)
Query: 17 NSIRTRALHLSVLPDAVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSR 76
S+ R+ H + +R++E + + G ++EL ++ L GE AV++ ++
Sbjct: 2 TSVTDRSAH------SAERSTEHTI-DIHTTAGKLAELHKRREESLHPVGEDAVEKVHAK 54
Query: 77 NKLLPRERIDRLTDPGSSFLELSQLAGHE-----LYEETLQSGGIITGIGPVHGR-LCMF 130
KL RERI L D SF+EL LA H L E+ G++TG G + GR +C+F
Sbjct: 55 GKLTARERIYALLDE-DSFVELDALAKHRSTNFNLGEKRPLGDGVVTGYGTIDGRDVCIF 113
Query: 131 VANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGR 190
+ D TV GG+ + +K ++ QE+A + P I + D GA + E + R
Sbjct: 114 -SQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGARI---QEGVVSLGLYSR 169
Query: 191 IFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGE 250
IF N I+++ IPQI+L++G+ G Y PA+ D +MV +F+ GP ++K TGE
Sbjct: 170 IFRNN-ILASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFITGPDVIKTVTGE 228
Query: 251 EISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPE- 309
E++ E+LGGA H SG + Y A E R ++ L + +Q P
Sbjct: 229 EVTMEELGGAHTHMAKSGTAHYAASGEQDAFDYVRELLSYL-PPNNSTDAPRYQAAAPTG 287
Query: 310 -YKEPLYDVK-ELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFG 367
+E L D EL ++ P Q +D+ VI R++D EF E + Y +V GF +I G
Sbjct: 288 PIEENLTDEDLELDTLIPDSPNQPYDMHEVITRLLD-DEFLEIQAGYAQNIVVGFGRIDG 346
Query: 368 QPVGIIGNN-----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIA 422
+PVGI+ N G L ++ K A F+ C IP+V L ++ GF+ G+ E NGI
Sbjct: 347 RPVGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 406
Query: 423 KAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAA 482
+ GAK++ A A VPK+T+I ++G M + + WP A+I+VMG + A
Sbjct: 407 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 466
Query: 483 GVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKE-GNAYYSTARLWDDGIIDPADTR 541
G + + + + G + K + ++ + YE N Y + R + +I P+ TR
Sbjct: 467 GFVYRQQLAEAAANGEDIDK-----LRLRLQQEYEDTLVNPYVAAERGYVGAVIPPSHTR 521
Query: 542 KIIGFCI 548
IG +
Sbjct: 522 GYIGTAL 528
>pdb|3GF3|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Glutaconyl-Coa
pdb|3GF7|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Apoprotein
pdb|3GLM|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GLM|B Chain B, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GLM|C Chain C, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GLM|D Chain D, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GMA|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Glutaryl-Coa
pdb|3GMA|B Chain B, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Glutaryl-Coa
Length = 588
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 151/552 (27%), Positives = 245/552 (44%), Gaps = 50/552 (9%)
Query: 42 RNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQL 101
N Q ++ + S++ I+K L G S K N R +L +RI+ L DPG+ + L+ L
Sbjct: 26 ENEQEIKAVESDIHESIKKALDAGITSEEKLNE-RGQLSAMQRINALIDPGT-WCPLNSL 83
Query: 102 AGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCK 161
E + I+ G+G V G+ VA+D G + P + +R + A
Sbjct: 84 FNPE--NNKFGTTNIVNGLGRVDGKWVYIVASDNKKMAGAWVPGQAENLIRCSDAAKMMH 141
Query: 162 LPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAY-- 219
LP IYL++ G P Q +V+P++ G F+ + ++ GIP I + G+ AGG Y
Sbjct: 142 LPLIYLLNCSGVEFPNQDKVYPNRRGGGTPFFRNSELNQLGIPVIVGIYGTNPAGGGYHS 201
Query: 220 -----IPAMADESVMVKGNGTIFLAGPP-LVKAATGEEISAEDL----------GGAAVH 263
+ A D ++ V G G + P + E+I A + G +H
Sbjct: 202 ISPTILIAHQDANMAVGGAGILSGMNPKGYIDDEAAEQIIAAQIENSKLKVPAPGSVPIH 261
Query: 264 CKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYDVKELYSI 323
+G Q++L + + I L + F+ P K P ++LYSI
Sbjct: 262 YDETGFFREVYQNDLGVIDGIKKYISYLPAYN----LEFFRVDTP--KAPQLPAEDLYSI 315
Query: 324 APADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGN-------- 375
P + K+ +DI VIAR+ D SEF E+KK YG +VTG AK+ G VG+I N
Sbjct: 316 IPMNQKRPYDIYEVIARLFDNSEFSEYKKGYGPEMVTGLAKVNGLLVGVIANVQGLLMNY 375
Query: 376 ----------NGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAG 425
G L+ + +K F+ LC + +IPL++LQ+ TG VG +E + G
Sbjct: 376 PEYKQNSVGIGGKLYRQGLIKMNEFVTLCARDRIPLIWLQDTTGIDVGDEAEKAELLGLG 435
Query: 426 AKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCG-RAYSPNFMFLWPNA-RISVMGGAQAAG 483
++ ++ +K+P + I + + A +Y + G + + N + A VM G AA
Sbjct: 436 QSLIYSIENSKLPSLEITIRKASAAAHYVLGGPQGNNTNVFSIGTGACEYYVMPGETAAN 495
Query: 484 VLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIIDPADTRKI 543
+ + K KK G + +M +++ Y + Y T + D I+D + R
Sbjct: 496 AMYSRKLVKAKKAGEDLQPIIGKM--NDMIQMYTDKSRPKYCTEKGMVDEIVDMTEVRPY 553
Query: 544 IGFCISAALNRP 555
I AA P
Sbjct: 554 IQAFTEAAYQNP 565
>pdb|1PIX|A Chain A, Crystal Structure Of The Carboxyltransferase Subunit Of
The Bacterial Ion Pump Glutaconyl-Coenzyme A
Decarboxylase
pdb|1PIX|B Chain B, Crystal Structure Of The Carboxyltransferase Subunit Of
The Bacterial Ion Pump Glutaconyl-Coenzyme A
Decarboxylase
Length = 587
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 140/564 (24%), Positives = 248/564 (43%), Gaps = 71/564 (12%)
Query: 36 NSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSF 95
N E + + + L+ E Q G ++ V + R +L +RI++L +PGS +
Sbjct: 27 NEEQLKKIEEEIHQLIKEAQE------AGKADADVNK---RGELTALQRIEKLVEPGS-W 76
Query: 96 LELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQE 155
L+ L + + S I+ G+G V+G+ C+ VA+D G + P + LRA +
Sbjct: 77 RPLNTLFNPQGNKNG--SVAIVKGLGRVNGKWCVVVASDNKKLAGAWVPGQAECLLRASD 134
Query: 156 IAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTA 215
A +P +Y+++ G +Q +V+P++ G F+ A ++ GIP I + G+ A
Sbjct: 135 TAKTLHVPLVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNAELNQLGIPVIVGIYGTNPA 194
Query: 216 GGAY-------IPAMADESVMVKGNGTIFLAGPP-LVKAATGEEIS--------AEDLGG 259
GG Y I A ++ V G G + P V EI+ E G
Sbjct: 195 GGGYHSISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDRTGKTEPPGA 254
Query: 260 AAVHCKTSG-VSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEY------KE 312
+H +G + + +A +E G+ + G + + +PE+ K
Sbjct: 255 VDIHYTETGFMREVYASEE--GV-----------LEGIKKYVGMLPKYDPEFFRVDDPKA 301
Query: 313 PLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGI 372
P + +LYS+ P + K+++DI +VIAR+ D SE E+KK YG +VTG AK+ G VG+
Sbjct: 302 PAFPADDLYSMVPLNDKRAYDIYNVIARLFDNSELHEYKKGYGPEMVTGLAKVNGLLVGV 361
Query: 373 IGN-------------------NGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVG 413
+ N G L+ + +K F+ LC + ++P+V++Q+ TG VG
Sbjct: 362 VANVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVG 421
Query: 414 SRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNA-- 471
+ +E + G ++ ++ + +P+ I + A +Y + G + F A
Sbjct: 422 NDAEKAELLGLGQSLIYSIQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAAT 481
Query: 472 RISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWD 531
I+VM G AA + K +K G + ++M +++A+ +
Sbjct: 482 EIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKM--NNLIQAFYTKSRPKVCAELGLV 539
Query: 532 DGIIDPADTRKIIGFCISAALNRP 555
D I+D R + AA P
Sbjct: 540 DEIVDMNKIRGYVEAFTEAAYQNP 563
>pdb|1UYV|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain L1705i
V1967i Mutant
pdb|1UYV|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain L1705i
V1967i Mutant
pdb|1UYV|C Chain C, Acetyl-Coa Carboxylase Carboxyltransferase Domain L1705i
V1967i Mutant
Length = 737
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 177/482 (36%), Gaps = 135/482 (28%)
Query: 124 HGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFP 183
GR + VAND T K G++ P + + E A + +P IYL + GA + E+ P
Sbjct: 97 RGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVP 156
Query: 184 --------------------------------DKENFGRIFYNQAIMSAEGIPQIALVLG 211
DKEN + + +++ E I ++G
Sbjct: 157 LFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKEN--SVLTERTVINGEERFVIKTIIG 214
Query: 212 S-------CTAG----------------------------GAYIPAMADESVMVKGNGTI 236
S C G GAY+ + ++ V+G I
Sbjct: 215 SEDGLGVECIRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQ-PI 273
Query: 237 FLAGPPLVKAATGEEISAED--LGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHM- 293
L G P + G E+ + LGG + +GVS A D+L G+ I++ +
Sbjct: 274 ILTGAPAINKMLGREVYTSNLQLGGTQI-MYNNGVSHLTAVDDLAGVE---KIVEWMSYV 329
Query: 294 -AGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSE------ 346
A R + P+ + K+ + P D + D + +++G E
Sbjct: 330 PAKRNMPV------------PILETKDTWD-RPVDFTPTNDETYDVRWMIEGRETESGFE 376
Query: 347 ---FDE---FKKLYGTT--LVTGFAKIFGQPVGIIG------------------------ 374
FD+ F+ L G +V G A++ G P+G+IG
Sbjct: 377 YGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLI 436
Query: 375 -NNGILFH-ESALKGAHFI-ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMA 431
G ++H SA K A I + ++P++ L N GF G R N I K G+ +V A
Sbjct: 437 QEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEILKYGSFIVDA 496
Query: 432 VSCAKVPKVTII-VGGSFGAGNYAMCGRAYSPNFMFLWP--NARISVMGGAQAAGVLSQV 488
+ K P + I G G++ + + + M ++ NAR V+ G+ +
Sbjct: 497 LVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRR 556
Query: 489 EK 490
EK
Sbjct: 557 EK 558
>pdb|1W2X|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Cp-640186
pdb|1W2X|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Cp-640186
pdb|1W2X|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Cp-640186
pdb|3K8X|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With
Tepraloxydim
pdb|3K8X|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With
Tepraloxydim
pdb|3K8X|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With
Tepraloxydim
Length = 758
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 177/482 (36%), Gaps = 135/482 (28%)
Query: 124 HGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFP 183
GR + VAND T K G++ P + + E A + +P IYL + GA + E+ P
Sbjct: 103 RGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVP 162
Query: 184 --------------------------------DKENFGRIFYNQAIMSAEGIPQIALVLG 211
DKEN + + +++ E I ++G
Sbjct: 163 LFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKEN--SVLTERTVINGEERFVIKTIIG 220
Query: 212 S-------CTAG----------------------------GAYIPAMADESVMVKGNGTI 236
S C G GAY+ + ++ V+G I
Sbjct: 221 SEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQ-PI 279
Query: 237 FLAGPPLVKAATGEEISAED--LGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHM- 293
L G P + G E+ + LGG + +GVS A D+L G+ I++ +
Sbjct: 280 ILTGAPAINKMLGREVYTSNLQLGGTQI-MYNNGVSHLTAVDDLAGVE---KIVEWMSYV 335
Query: 294 -AGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSE------ 346
A R + P+ + K+ + P D + D + +++G E
Sbjct: 336 PAKRNMPV------------PILETKDTWD-RPVDFTPTNDETYDVRWMIEGRETESGFE 382
Query: 347 ---FDE---FKKLYGTT--LVTGFAKIFGQPVGIIG------------------------ 374
FD+ F+ L G +V G A++ G P+G+IG
Sbjct: 383 YGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLI 442
Query: 375 -NNGILFH-ESALKGAHFI-ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMA 431
G ++H SA K A I + ++P++ L N GF G R N + K G+ +V A
Sbjct: 443 QEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDA 502
Query: 432 VSCAKVPKVTII-VGGSFGAGNYAMCGRAYSPNFMFLWP--NARISVMGGAQAAGVLSQV 488
+ K P + I G G++ + + + M ++ NAR V+ G+ +
Sbjct: 503 LVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRR 562
Query: 489 EK 490
EK
Sbjct: 563 EK 564
>pdb|3PGQ|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of S.
Cerevisiae Acetyl Coa Carboxylase In Complex With
Pinoxaden
pdb|3PGQ|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of S.
Cerevisiae Acetyl Coa Carboxylase In Complex With
Pinoxaden
pdb|3PGQ|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of S.
Cerevisiae Acetyl Coa Carboxylase In Complex With
Pinoxaden
Length = 764
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 177/482 (36%), Gaps = 135/482 (28%)
Query: 124 HGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFP 183
GR + VAND T K G++ P + + E A + +P IYL + GA + E+ P
Sbjct: 103 RGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVP 162
Query: 184 --------------------------------DKENFGRIFYNQAIMSAEGIPQIALVLG 211
DKEN + + +++ E I ++G
Sbjct: 163 LFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKEN--SVLTERTVINGEERFVIKTIIG 220
Query: 212 S-------CTAG----------------------------GAYIPAMADESVMVKGNGTI 236
S C G GAY+ + ++ V+G I
Sbjct: 221 SEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQ-PI 279
Query: 237 FLAGPPLVKAATGEEISAED--LGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHM- 293
L G P + G E+ + LGG + +GVS A D+L G+ I++ +
Sbjct: 280 ILTGAPAINKMLGREVYTSNLQLGGTQI-MYNNGVSHLTAVDDLAGVE---KIVEWMSYV 335
Query: 294 -AGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSE------ 346
A R + P+ + K+ + P D + D + +++G E
Sbjct: 336 PAKRNMPV------------PILETKDTWD-RPVDFTPTNDETYDVRWMIEGRETESGFE 382
Query: 347 ---FDE---FKKLYGTT--LVTGFAKIFGQPVGIIG------------------------ 374
FD+ F+ L G +V G A++ G P+G+IG
Sbjct: 383 YGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLI 442
Query: 375 -NNGILFH-ESALKGAHFI-ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMA 431
G ++H SA K A I + ++P++ L N GF G R N + K G+ +V A
Sbjct: 443 QEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDA 502
Query: 432 VSCAKVPKVTII-VGGSFGAGNYAMCGRAYSPNFMFLWP--NARISVMGGAQAAGVLSQV 488
+ K P + I G G++ + + + M ++ NAR V+ G+ +
Sbjct: 503 LVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRR 562
Query: 489 EK 490
EK
Sbjct: 563 EK 564
>pdb|3H0J|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 2
pdb|3H0J|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 2
pdb|3H0J|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 2
pdb|3H0S|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 7
pdb|3H0S|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 7
pdb|3H0S|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 7
pdb|3H0Q|A Chain A, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 3
pdb|3H0Q|B Chain B, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 3
pdb|3H0Q|C Chain C, Crystal Structure Of The Carboxyltransferase Domain Of
Acetyl-Coenzyme A Carboxylase In Complex With Compound 3
Length = 769
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 177/482 (36%), Gaps = 135/482 (28%)
Query: 124 HGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFP 183
GR + VAND T K G++ P + + E A + +P IYL + GA + E+ P
Sbjct: 106 RGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVP 165
Query: 184 --------------------------------DKENFGRIFYNQAIMSAEGIPQIALVLG 211
DKEN + + +++ E I ++G
Sbjct: 166 LFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKEN--SVLTERTVINGEERFVIKTIIG 223
Query: 212 S-------CTAG----------------------------GAYIPAMADESVMVKGNGTI 236
S C G GAY+ + ++ V+G I
Sbjct: 224 SEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQ-PI 282
Query: 237 FLAGPPLVKAATGEEISAED--LGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHM- 293
L G P + G E+ + LGG + +GVS A D+L G+ I++ +
Sbjct: 283 ILTGAPAINKMLGREVYTSNLQLGGTQI-MYNNGVSHLTAVDDLAGVE---KIVEWMSYV 338
Query: 294 -AGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSE------ 346
A R + P+ + K+ + P D + D + +++G E
Sbjct: 339 PAKRNMPV------------PILETKDTWD-RPVDFTPTNDETYDVRWMIEGRETESGFE 385
Query: 347 ---FDE---FKKLYGTT--LVTGFAKIFGQPVGIIG------------------------ 374
FD+ F+ L G +V G A++ G P+G+IG
Sbjct: 386 YGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLI 445
Query: 375 -NNGILFH-ESALKGAHFI-ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMA 431
G ++H SA K A I + ++P++ L N GF G R N + K G+ +V A
Sbjct: 446 QEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDA 505
Query: 432 VSCAKVPKVTII-VGGSFGAGNYAMCGRAYSPNFMFLWP--NARISVMGGAQAAGVLSQV 488
+ K P + I G G++ + + + M ++ NAR V+ G+ +
Sbjct: 506 LVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRR 565
Query: 489 EK 490
EK
Sbjct: 566 EK 567
>pdb|1UYR|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain In
Complex With Inhibitor Diclofop
pdb|1UYR|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain In
Complex With Inhibitor Diclofop
pdb|1UYT|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1UYT|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1UYT|C Chain C, Acetyl-Coa Carboxylase Carboxyltransferase Domain
Length = 737
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 177/482 (36%), Gaps = 135/482 (28%)
Query: 124 HGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFP 183
GR + VAND T K G++ P + + E A + +P IYL + GA + E+ P
Sbjct: 97 RGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVP 156
Query: 184 --------------------------------DKENFGRIFYNQAIMSAEGIPQIALVLG 211
DKEN + + +++ E I ++G
Sbjct: 157 LFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKEN--SVLTERTVINGEERFVIKTIIG 214
Query: 212 S-------CTAG----------------------------GAYIPAMADESVMVKGNGTI 236
S C G GAY+ + ++ V+G I
Sbjct: 215 SEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQ-PI 273
Query: 237 FLAGPPLVKAATGEEISAED--LGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHM- 293
L G P + G E+ + LGG + +GVS A D+L G+ I++ +
Sbjct: 274 ILTGAPAINKMLGREVYTSNLQLGGTQI-MYNNGVSHLTAVDDLAGVE---KIVEWMSYV 329
Query: 294 -AGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSE------ 346
A R + P+ + K+ + P D + D + +++G E
Sbjct: 330 PAKRNMPV------------PILETKDTWD-RPVDFTPTNDETYDVRWMIEGRETESGFE 376
Query: 347 ---FDE---FKKLYGTT--LVTGFAKIFGQPVGIIG------------------------ 374
FD+ F+ L G +V G A++ G P+G+IG
Sbjct: 377 YGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLI 436
Query: 375 -NNGILFH-ESALKGAHFI-ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMA 431
G ++H SA K A I + ++P++ L N GF G R N + K G+ +V A
Sbjct: 437 QEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDA 496
Query: 432 VSCAKVPKVTII-VGGSFGAGNYAMCGRAYSPNFMFLWP--NARISVMGGAQAAGVLSQV 488
+ K P + I G G++ + + + M ++ NAR V+ G+ +
Sbjct: 497 LVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRR 556
Query: 489 EK 490
EK
Sbjct: 557 EK 558
>pdb|3TV5|A Chain A, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 1
pdb|3TV5|B Chain B, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 1
pdb|3TV5|C Chain C, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 1
pdb|3TVU|A Chain A, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 3
pdb|3TVU|B Chain B, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 3
pdb|3TVU|C Chain C, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 3
pdb|3TVW|A Chain A, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 4
pdb|3TVW|B Chain B, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 4
pdb|3TVW|C Chain C, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 4
pdb|3TZ3|A Chain A, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 2
pdb|3TZ3|B Chain B, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 2
pdb|3TZ3|C Chain C, Crystal Structure Of The Humanized Carboxyltransferase
Domain Of Yeast Acetyl-Coa Caroxylase In Complex With
Compound 2
Length = 769
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 171/468 (36%), Gaps = 135/468 (28%)
Query: 124 HGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFP 183
GR + VAND T K G++ P + + E A + +P IYL + GA + E+ P
Sbjct: 106 RGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVP 165
Query: 184 --------------------------------DKENFGRIFYNQAIMSAEGIPQIALVLG 211
DKEN + + +++ E I ++G
Sbjct: 166 LFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKEN--SVLTERTVINGEERFVIKTIIG 223
Query: 212 S-------CTAG----------------------------GAYIPAMADESVMVKGNGTI 236
S C G GAY+ + ++ V+G I
Sbjct: 224 SEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQ-PI 282
Query: 237 FLAGPPLVKAATGEEISAED--LGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHM- 293
L G + G E+ + LGG + +GVS A D+L G+ I++ +
Sbjct: 283 ILTGASALNKVLGREVYTSNLQLGGTQI-MYNNGVSHLTAVDDLAGVE---KIVEWMSYV 338
Query: 294 -AGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSE------ 346
A R + P+ + K+ + P D + D + +++G E
Sbjct: 339 PAKRNMPV------------PILETKDTWD-RPVDFTPTNDETYDVRWMIEGRETESGFE 385
Query: 347 ---FDE---FKKLYGTT--LVTGFAKIFGQPVGIIG-----------------NNG---- 377
FD+ F+ L G +V G A++ G P+G+IG N+
Sbjct: 386 YGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLI 445
Query: 378 -----ILFHESALKGAHFI-ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMA 431
+ F SA K A I + ++P++ L N GF G R N + K G+ +V A
Sbjct: 446 QQAGQVWFPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDA 505
Query: 432 VSCAKVPKVTII-VGGSFGAGNYAMCGRAYSPNFMFLWP--NARISVM 476
+ K P + I G G++ + + + M ++ NAR V+
Sbjct: 506 LVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVL 553
>pdb|3TDC|A Chain A, Crystal Structure Of Human Acetyl-Coa Carboxylase 2
Length = 762
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 44/285 (15%)
Query: 195 QAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEI-- 252
++ ++ E I I+LV GAY+ + + V+ N I L G + G E+
Sbjct: 228 ESSLAYEEIVTISLVTCRAIGIGAYLVRLGQRVIQVE-NSHIILTGASALNKVLGREVYT 286
Query: 253 SAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKE 312
S LGG + +GVS D+ G+ I++ L + + I P +
Sbjct: 287 SNNQLGGVQI-MHYNGVSHITVPDDFEGVY---TILEWLSYMPKDNH-SPVPIITP--TD 339
Query: 313 PL-YDVKELYSIAPADLKQSFDIR-------SVIARIVDGSEFDEFKKLYGTTLVTGFAK 364
P+ +++ L S AP D + R + + D F E + T+VTG A+
Sbjct: 340 PIDREIEFLPSRAPYDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEIMAPWAQTVVTGRAR 399
Query: 365 IFGQPVGIIGNNG--------------------------ILFHESALKGAHFIELCTQRK 398
+ G PVG+I + F +SA K A I+ + K
Sbjct: 400 LGGIPVGVIAVETRTVEVAVPADPANLDSEAKIIQQAGQVWFPDSAYKTAQAIKDFNREK 459
Query: 399 IPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTII 443
+PL+ N GF G + + + K GA +V + K P + I
Sbjct: 460 LPLMIFANWRGFSGGMKDMYDQVLKFGAYIVDGLRQYKQPILIYI 504
>pdb|3FF6|A Chain A, Human Acc2 Ct Domain With Cp-640186
pdb|3FF6|B Chain B, Human Acc2 Ct Domain With Cp-640186
pdb|3FF6|C Chain C, Human Acc2 Ct Domain With Cp-640186
pdb|3FF6|D Chain D, Human Acc2 Ct Domain With Cp-640186
Length = 760
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 44/285 (15%)
Query: 195 QAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEI-- 252
++ ++ E I I+LV GAY+ + + V+ N I L G + G E+
Sbjct: 226 ESSLAYEEIVTISLVTCRAIGIGAYLVRLGQRVIQVE-NSHIILTGASALNKVLGREVYT 284
Query: 253 SAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKE 312
S LGG + +GVS D+ G+ I++ L + + I P +
Sbjct: 285 SNNQLGGVQI-MHYNGVSHITVPDDFEGVY---TILEWLSYMPKDNH-SPVPIITP--TD 337
Query: 313 PL-YDVKELYSIAPADLKQSFDIR-------SVIARIVDGSEFDEFKKLYGTTLVTGFAK 364
P+ +++ L S AP D + R + + D F E + T+VTG A+
Sbjct: 338 PIDREIEFLPSRAPYDPRWMLAGRPHPTLKGTWQSGFFDHGSFKEIMAPWAQTVVTGRAR 397
Query: 365 IFGQPVGIIGNNG--------------------------ILFHESALKGAHFIELCTQRK 398
+ G PVG+I + F +SA K A I+ + K
Sbjct: 398 LGGIPVGVIAVETRTVEVAVPADPANLDSEAKIIQQAGQVWFPDSAYKTAQAIKDFNREK 457
Query: 399 IPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTII 443
+PL+ N GF G + + + K GA +V + K P + I
Sbjct: 458 LPLMIFANWRGFSGGMKDMYDQVLKFGAYIVDGLRQYKQPILIYI 502
>pdb|1UYS|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain In
Complex With Inhibitor Haloxyfop
pdb|1UYS|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain In
Complex With Inhibitor Haloxyfop
pdb|1UYS|C Chain C, Acetyl-Coa Carboxylase Carboxyltransferase Domain In
Complex With Inhibitor Haloxyfop
Length = 737
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 149/430 (34%), Gaps = 128/430 (29%)
Query: 124 HGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFP 183
GR + VAND T K G++ P + + E A + +P IYL + GA + E+ P
Sbjct: 97 RGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGXAEEIVP 156
Query: 184 --------------------------------DKENFGRIFYNQAIMSAEGIPQIALVLG 211
DKEN + + +++ E I ++G
Sbjct: 157 LFQVAWNDAANPDKGFQYLYLTSEGXETLKKFDKEN--SVLTERTVINGEERFVIKTIIG 214
Query: 212 S-------CTAG----------------------------GAYIPAMADESVMVKGNGTI 236
S C G GAY+ + ++ V+G I
Sbjct: 215 SEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQ-PI 273
Query: 237 FLAGPPLVKAATGEEISAED--LGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMA 294
L G P + G E+ + LGG + +GVS A D+L G+ I+
Sbjct: 274 ILTGAPAINKXLGREVYTSNLQLGGTQIXY-NNGVSHLTAVDDLAGVE---KIV------ 323
Query: 295 GRQGEINGFQNINPEYKEPLYDVKELYSIAPADL----KQSFDIRSVIA----------R 340
E + P+ + K+ + P D +++D+R I
Sbjct: 324 ----EWXSYVPAKRNXPVPILETKDTWD-RPVDFTPTNDETYDVRWXIEGRETESGFEYG 378
Query: 341 IVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIG-------------------------N 375
+ D F E + +V G A++ G P+G+IG
Sbjct: 379 LFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQE 438
Query: 376 NGILFH-ESALKGAHFI-ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVS 433
G ++H SA K A I + ++P L N GF G R N + K G+ +V A+
Sbjct: 439 PGQVWHPNSAFKTAQAINDFNNGEQLPXXILANWRGFSGGQRDXFNEVLKYGSFIVDALV 498
Query: 434 CAKVPKVTII 443
K P + I
Sbjct: 499 DYKQPIIIYI 508
>pdb|1OD2|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1OD2|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1OD4|A Chain A, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1OD4|B Chain B, Acetyl-Coa Carboxylase Carboxyltransferase Domain
pdb|1OD4|C Chain C, Acetyl-Coa Carboxylase Carboxyltransferase Domain
Length = 805
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 149/430 (34%), Gaps = 128/430 (29%)
Query: 124 HGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFP 183
GR + VAND T K G++ P + + E A + +P IYL + GA + E+ P
Sbjct: 150 RGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGXAEEIVP 209
Query: 184 --------------------------------DKENFGRIFYNQAIMSAEGIPQIALVLG 211
DKEN + + +++ E I ++G
Sbjct: 210 LFQVAWNDAANPDKGFQYLYLTSEGXETLKKFDKEN--SVLTERTVINGEERFVIKTIIG 267
Query: 212 S-------CTAG----------------------------GAYIPAMADESVMVKGNGTI 236
S C G GAY+ + ++ V+G I
Sbjct: 268 SEDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQ-PI 326
Query: 237 FLAGPPLVKAATGEEISAED--LGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMA 294
L G P + G E+ + LGG + +GVS A D+L G+ I+
Sbjct: 327 ILTGAPAINKXLGREVYTSNLQLGGTQIXY-NNGVSHLTAVDDLAGVE---KIV------ 376
Query: 295 GRQGEINGFQNINPEYKEPLYDVKELYSIAPADL----KQSFDIRSVIA----------R 340
E + P+ + K+ + P D +++D+R I
Sbjct: 377 ----EWXSYVPAKRNXPVPILETKDTWD-RPVDFTPTNDETYDVRWXIEGRETESGFEYG 431
Query: 341 IVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIG-------------------------N 375
+ D F E + +V G A++ G P+G+IG
Sbjct: 432 LFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQE 491
Query: 376 NGILFH-ESALKGAHFI-ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVS 433
G ++H SA K A I + ++P L N GF G R N + K G+ +V A+
Sbjct: 492 PGQVWHPNSAFKTAQAINDFNNGEQLPXXILANWRGFSGGQRDXFNEVLKYGSFIVDALV 551
Query: 434 CAKVPKVTII 443
K P + I
Sbjct: 552 DYKQPIIIYI 561
>pdb|2F9Y|A Chain A, The Crystal Structure Of The Carboxyltransferase Subunit
Of Acc From Escherichia Coli
Length = 339
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
Query: 94 SFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKG--------GTYFPI 145
+F E +LAG Y + I+ GI + GR M + + + G P
Sbjct: 102 AFDEFDELAGDRAYAD---DKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPE 158
Query: 146 TIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQ 205
+K LR ++A + K+P I +D+ GAY AE E R N MS G+P
Sbjct: 159 GYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIAR---NLREMSRLGVPV 215
Query: 206 IALVLGSCTAGGAYIPAMADESVMVK 231
+ V+G +GGA + D+ M++
Sbjct: 216 VCTVIGEGGSGGALAIGVGDKVNMLQ 241
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYGT-------TLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
FDEF +L G +V G A++ G+PV IIG N G+ E K
Sbjct: 103 FDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 162
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+++ + K+P++ + G G +E G ++A A+ + +S VP V ++
Sbjct: 163 ALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGE 222
Query: 445 GGSFGA 450
GGS GA
Sbjct: 223 GGSGGA 228
>pdb|4ASI|A Chain A, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|B Chain B, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|C Chain C, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|D Chain D, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|E Chain E, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|F Chain F, Crystal Structure Of Human Acaca C-Terminal Domain
Length = 769
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 151/384 (39%), Gaps = 54/384 (14%)
Query: 130 FVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGA------YLPKQAEVFP 183
+V + KG Y +T + + R ++A + C ++ D G + + K+ + P
Sbjct: 169 WVDPEDPYKGYRYLYLTPQDYKR---VSALNSVHCEHVEDEGESRYKITDIIGKEEGIGP 225
Query: 184 DKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPL 243
+ + ++ ++ I I+LV GAY+ + ++ V+ N + L G
Sbjct: 226 ENLRGSGMIAGESSLAYNEIITISLVTCRAIGIGAYLVRLGQRTIQVE-NSHLILTGAGA 284
Query: 244 VKAATGEEI--SAEDLGGAAVHCKTSGVSDYFAQDE-------LHGLS-LGRNIIKNLHM 293
+ G E+ S LGG + +GV+ D+ LH LS + +++ ++ +
Sbjct: 285 LNKVLGREVYTSNNQLGGIQI-MHNNGVTHCTVCDDFEGVFTVLHWLSYMPKSVHSSVPL 343
Query: 294 AGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKL 353
+ I+ P K P YD + + + P ++ ++ D F E +
Sbjct: 344 LNSKDPIDRIIEFVPT-KTP-YDPRWMLAGRPHPTQKG----QWLSGFFDYGSFSEIMQP 397
Query: 354 YGTTLVTGFAKIFGQPVGIIGNNG--------------------------ILFHESALKG 387
+ T+V G A++ G PVG++ + F +SA K
Sbjct: 398 WAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKIIQQAGQVWFPDSAFKT 457
Query: 388 AHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAV-SCAKVPKVTIIVGG 446
I+ + +PL+ N GF G + + + K GA +V + C + V I
Sbjct: 458 YQAIKDFNREGLPLMVFANWRGFSGGMKDMYDQVLKFGAYIVDGLRECCQPVLVYIPPQA 517
Query: 447 SFGAGNYAMCGRAYSPNFMFLWPN 470
G++ + + +P M ++ +
Sbjct: 518 ELRGGSWVVIDSSINPRHMEMYAD 541
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 125 GRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGA 173
GR + + ND T + G++ P LRA E+A +P IY+ + GA
Sbjct: 105 GRDIIVIGNDITYRIGSFGPQEDLLFLRASELARAEGIPRIYVSANSGA 153
>pdb|2X24|A Chain A, Bovine Acc2 Ct Domain In Complex With Inhibitor
pdb|2X24|B Chain B, Bovine Acc2 Ct Domain In Complex With Inhibitor
Length = 793
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 57/301 (18%)
Query: 206 IALVLGSCTAGG--AYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEI--SAEDLGGAA 261
+ + + SC A G AY+ + + V+ N I L G + G ++ S LGG
Sbjct: 261 VTISMVSCRALGIGAYLVRLGQRVIQVE-NSHIILTGATALNKVLGRDVYTSNNQLGGVQ 319
Query: 262 VHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPL------- 314
+ +GVS D+ G+ I++ L + + + P K+P+
Sbjct: 320 I-MHHNGVSHVTVPDDFEGVC---TILEWLSYMPKDNR-SPVPVVTP--KDPIDREIEFQ 372
Query: 315 -----YDVKELYSIAP-ADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQ 368
YD + L + P LK S+ + D F E + T+VTG A++ G
Sbjct: 373 PSRGPYDPRWLLAGRPHPTLKGSWQ-----SGFFDQGSFKEIMVPWAQTVVTGRARLGGI 427
Query: 369 PVGIIGNNG--------------------------ILFHESALKGAHFIELCTQRKIPLV 402
PVG+I + F +SA K A I+ + K+PL+
Sbjct: 428 PVGVIAAETRTVELVVPADPANLDSEAKIIQQAGQVWFPDSAYKTAQAIKDFNREKLPLM 487
Query: 403 FLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVG-GSFGAGNYAMCGRAYS 461
N GF G + + + K GA +V + + P + I G++A+ + +
Sbjct: 488 IFANWRGFSGGMKDMYDQVLKFGAYIVDGLRKYRQPVLIYIPPYAEVRGGSWAVMDTSIN 547
Query: 462 P 462
P
Sbjct: 548 P 548
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 90 DPGSSFLELSQL-AGHEL----YEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFP 144
DP +E+++L G+E+ ++ TL++ + GR + ++ND T + G++ P
Sbjct: 86 DPQGQLVEMNRLPGGNEVGMVAFKMTLKT------LEYPEGRDIILISNDITFRIGSFGP 139
Query: 145 ITIKKHLRAQEIAAQCKLPCIYLVDSGGA 173
+LRA E+A +P +YL + GA
Sbjct: 140 GEDLLYLRASELARAEGIPRVYLAANSGA 168
>pdb|2F9I|A Chain A, Crystal Structure Of The Carboxyltransferase Subunit Of
Acc From Staphylococcus Aureus
pdb|2F9I|C Chain C, Crystal Structure Of The Carboxyltransferase Subunit Of
Acc From Staphylococcus Aureus
Length = 327
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Query: 115 GIITGIGPVHGRLCMFVAND--PTVKGGTY------FPITIKKHLRAQEIAAQCKLPCIY 166
+I GIG ++GR + K Y P +K LR + A + P
Sbjct: 106 AMIGGIGFLNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFT 165
Query: 167 LVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADE 226
+D+ GAY K AE E+ I N M++ +P IA+V+G +GGA +A++
Sbjct: 166 FIDTKGAYPGKAAEERGQSES---IATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANK 222
Query: 227 SVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHG 280
+M++ N T + P L K + +I+AE + A K G+ D + L G
Sbjct: 223 VLMLE-NSTYSVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDVISEPLGG 280
>pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase
pdb|1T2A|B Chain B, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase
pdb|1T2A|C Chain C, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase
pdb|1T2A|D Chain D, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase
Length = 375
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 352 KLYGTTLVTGFAKIFGQPVGIIGNNGILF-HESALKGAHFIELCTQRKIPLVFLQNITGF 410
KLY +V F + + + NGILF HES +GA+F+ R + ++L + F
Sbjct: 184 KLYAYWIVVNFREAYN----LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECF 239
Query: 411 MVGS 414
+G+
Sbjct: 240 SLGN 243
>pdb|2PEY|A Chain A, Crystal Strucutre Of Deletion Mutant Of Aps-Kinase Domain
Of Human Paps-Synthetase 1
pdb|2PEY|B Chain B, Crystal Strucutre Of Deletion Mutant Of Aps-Kinase Domain
Of Human Paps-Synthetase 1
pdb|2PEZ|A Chain A, Crystal Structrue Of Deletion Mutant Of Aps-Kinase Domain
Of Human Paps-Synthetase 1 In Complex With Cyclic Paps
And Dadp
pdb|2PEZ|B Chain B, Crystal Structrue Of Deletion Mutant Of Aps-Kinase Domain
Of Human Paps-Synthetase 1 In Complex With Cyclic Paps
And Dadp
Length = 179
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 288 IKNLHMAGRQGEINGFQNINPEYKEP 313
+K L+ R GEI GF I+ EY++P
Sbjct: 123 VKGLYKKARAGEIKGFTGIDSEYEKP 148
>pdb|3A8U|X Chain X, Crystal Structure Of Omega-Amino Acid:pyruvate
Aminotransferase
Length = 449
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 348 DEFKKLYGTTLVTGFAKIFGQPVGIIGNNGILFH-ESALKGAHFIELCTQRKIPLVFLQN 406
DE KL + A +F +P+ G+ G+L E LK E+C Q I LVF +
Sbjct: 206 DELLKLIELHDASNIAAVFVEPLA--GSAGVLVPPEGYLKRNR--EICNQHNILLVFDEV 261
Query: 407 ITGF 410
ITGF
Sbjct: 262 ITGF 265
>pdb|2OFX|A Chain A, Crystal Structure Of The Apsk Domain Of Human Papss1 In
Complex With Adpmg And Paps
pdb|2OFX|B Chain B, Crystal Structure Of The Apsk Domain Of Human Papss1 In
Complex With Adpmg And Paps
Length = 207
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 288 IKNLHMAGRQGEINGFQNINPEYKEP 313
+K L+ R GEI GF I+ EY++P
Sbjct: 150 VKGLYKKARAGEIKGFTGIDSEYEKP 175
>pdb|2OFW|A Chain A, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|B Chain B, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|C Chain C, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|D Chain D, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|E Chain E, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|F Chain F, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|G Chain G, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|H Chain H, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
Length = 208
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 288 IKNLHMAGRQGEINGFQNINPEYKEP 313
+K L+ R GEI GF I+ EY++P
Sbjct: 151 VKGLYKKARAGEIKGFTGIDSEYEKP 176
>pdb|1HSS|A Chain A, 0.19 Alpha-Amylase Inhibitor From Wheat
pdb|1HSS|B Chain B, 0.19 Alpha-Amylase Inhibitor From Wheat
pdb|1HSS|C Chain C, 0.19 Alpha-Amylase Inhibitor From Wheat
pdb|1HSS|D Chain D, 0.19 Alpha-Amylase Inhibitor From Wheat
Length = 124
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 151 LRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPD 184
L A I A C+LP + GAY+ K +PD
Sbjct: 90 LTAASITAVCRLPIVVDASGDGAYVCKDVAAYPD 123
>pdb|1X6V|B Chain B, The Crystal Structure Of Human 3'-Phosphoadenosine-5'-
Phosphosulfate Synthetase 1
pdb|1X6V|A Chain A, The Crystal Structure Of Human 3'-Phosphoadenosine-5'-
Phosphosulfate Synthetase 1
pdb|1XJQ|B Chain B, Adp Complex Of Human Paps Synthetase 1
pdb|1XJQ|A Chain A, Adp Complex Of Human Paps Synthetase 1
pdb|1XNJ|B Chain B, Aps Complex Of Human Paps Synthetase 1
pdb|1XNJ|A Chain A, Aps Complex Of Human Paps Synthetase 1
Length = 630
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 288 IKNLHMAGRQGEINGFQNINPEYKEP 313
+K L+ R GEI GF I+ EY++P
Sbjct: 170 VKGLYKKARAGEIKGFTGIDSEYEKP 195
>pdb|2F9Y|B Chain B, The Crystal Structure Of The Carboxyltransferase Subunit
Of Acc From Escherichia Coli
Length = 304
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 3/145 (2%)
Query: 108 EETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYL 167
+ET + ++ G ++G + A + GG+ + + +RA E A + P I
Sbjct: 100 KETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICF 159
Query: 168 VDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADES 227
SGGA + E + A M G+P I+++ G + AM +
Sbjct: 160 SASGGA---RMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDL 216
Query: 228 VMVKGNGTIFLAGPPLVKAATGEEI 252
+ + I AGP +++ E++
Sbjct: 217 NIAEPKALIGFAGPRVIEQTVREKL 241
>pdb|1G55|A Chain A, Structure Of Human Dnmt2, An Enigmatic Dna
Methyltransferase Homologue
Length = 343
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 322 SIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNNGILFH 381
++A K +F ++A+ ++G +EF +L ++ QP IG G +
Sbjct: 36 TVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPP---CQPFTRIGRQGDMTD 92
Query: 382 ESALKGAHFIELCTQ-RKIP-LVFLQNITGFMVGS 414
H +++ + +K+P + L+N+ GF V S
Sbjct: 93 SRTNSFLHILDILPRLQKLPKYILLENVKGFEVSS 127
>pdb|2AX4|A Chain A, Crystal Structure Of The Kinase Domain Of Human 3'-
Phosphoadenosine 5'-Phosphosulphate Synthetase 2
pdb|2AX4|B Chain B, Crystal Structure Of The Kinase Domain Of Human 3'-
Phosphoadenosine 5'-Phosphosulphate Synthetase 2
pdb|2AX4|C Chain C, Crystal Structure Of The Kinase Domain Of Human 3'-
Phosphoadenosine 5'-Phosphosulphate Synthetase 2
pdb|2AX4|D Chain D, Crystal Structure Of The Kinase Domain Of Human 3'-
Phosphoadenosine 5'-Phosphosulphate Synthetase 2
Length = 198
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 288 IKNLHMAGRQGEINGFQNINPEYKEP 313
+K L+ R GEI GF I+ +Y++P
Sbjct: 140 VKGLYKRARAGEIKGFTGIDSDYEKP 165
>pdb|1HVQ|A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein
With Chitinase And Lysozyme Activity, And Its Complex
With An Inhibitor
pdb|1LLO|A Chain A, Hevamine A (A Plant EndochitinaseLYSOZYME) COMPLEXED WITH
Allosamidin
pdb|2HVM|A Chain A, Hevamine A At 1.8 Angstrom Resolution
Length = 273
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 22/150 (14%)
Query: 390 FIELCTQRKIPLVFLQNITGFMVGSRSEAN-----GIAKAGAKMVM-AVSCAKVPKVTII 443
+ C+ RK V + + F G + N A G +V + ++ + ++
Sbjct: 16 LTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQIQGIKVM 75
Query: 444 VGGSFGAGNYAMCGRAYSPNFM-FLWPNARISVMGGAQAA-----GVLSQVEKDKKKKQG 497
+ G G+Y + +A + N +LW N +GG ++ VL ++ D +
Sbjct: 76 LSLGGGIGSYTLASQADAKNVADYLWNN----FLGGKSSSRPLGDAVLDGIDFDIEHGST 131
Query: 498 IEWTKQEEEMFKAKVVEAYEKEGNAYYSTA 527
+ W A+ + AY K+G Y TA
Sbjct: 132 LYWDDL------ARYLSAYSKQGKKVYLTA 155
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,666,838
Number of Sequences: 62578
Number of extensions: 712982
Number of successful extensions: 2037
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1870
Number of HSP's gapped (non-prelim): 73
length of query: 566
length of database: 14,973,337
effective HSP length: 104
effective length of query: 462
effective length of database: 8,465,225
effective search space: 3910933950
effective search space used: 3910933950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)