BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048389
(566 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LDD8|MCCB_ARATH Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
OS=Arabidopsis thaliana GN=MCCB PE=2 SV=1
Length = 587
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/545 (81%), Positives = 500/545 (91%)
Query: 22 RALHLSVLPDAVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLP 81
+ + +LPD VDRNSEAF NS M+G++SEL+SHI+KVL GGGE AVKRNRSRNKLLP
Sbjct: 43 KGFCVGILPDGVDRNSEAFSSNSIAMEGILSELRSHIKKVLAGGGEEAVKRNRSRNKLLP 102
Query: 82 RERIDRLTDPGSSFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGT 141
RERIDRL DPGSSFLELSQLAGHELYEE L SGGIITGIGP+HGR+CMF+ANDPTVKGGT
Sbjct: 103 RERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGIITGIGPIHGRICMFMANDPTVKGGT 162
Query: 142 YFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAE 201
Y+PITIKKHLRAQEIAA+C+LPCIYLVDSGGAYLPKQAEVFPDKENFGR+FYN+++MS++
Sbjct: 163 YYPITIKKHLRAQEIAARCRLPCIYLVDSGGAYLPKQAEVFPDKENFGRVFYNESVMSSD 222
Query: 202 GIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAA 261
GIPQIA+VLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEE+SAEDLGGA
Sbjct: 223 GIPQIAIVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGAT 282
Query: 262 VHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYDVKELY 321
VHC SGVSDYFAQDELHGL++GRNI+KNLHMA +QG F + N YKEPLYD+ EL
Sbjct: 283 VHCTVSGVSDYFAQDELHGLAIGRNIVKNLHMAAKQGMEGTFGSKNLVYKEPLYDINELR 342
Query: 322 SIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNNGILFH 381
SIAP D KQ FD+RS+IARIVDGSEFDEFKK YGTTLVTGFA+I+GQ VGIIGNNGILF+
Sbjct: 343 SIAPVDHKQQFDVRSIIARIVDGSEFDEFKKQYGTTLVTGFARIYGQTVGIIGNNGILFN 402
Query: 382 ESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVT 441
ESALKGAHFIELC+QRKIPLVFLQNITGFMVGSR+EANGIAKAGAKMVMAVSCAKVPK+T
Sbjct: 403 ESALKGAHFIELCSQRKIPLVFLQNITGFMVGSRAEANGIAKAGAKMVMAVSCAKVPKIT 462
Query: 442 IIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWT 501
II G SFGAGNYAMCGRAYSP+FMF+WPNARI +MGGAQAAGVL+Q+E+ KK+QGI+WT
Sbjct: 463 IITGASFGAGNYAMCGRAYSPDFMFIWPNARIGIMGGAQAAGVLTQIERATKKRQGIKWT 522
Query: 502 KQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIIDPADTRKIIGFCISAALNRPVEDTKY 561
++EEE FK K V+AYE+E N YYSTARLWDDG+IDP DTRK++G C+SAALNRP+EDT++
Sbjct: 523 EEEEEAFKKKTVDAYEREANPYYSTARLWDDGVIDPCDTRKVLGLCLSAALNRPLEDTRF 582
Query: 562 GVFRM 566
GVFRM
Sbjct: 583 GVFRM 587
>sp|Q9V9A7|MCCB_DROME Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
OS=Drosophila melanogaster GN=l(2)04524 PE=2 SV=1
Length = 578
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/574 (62%), Positives = 453/574 (78%), Gaps = 19/574 (3%)
Query: 8 RTAASVLKANSIRTRALHL---SVLPDAVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGG 64
R+++ +L++ + R LH+ +VL VD+ S + N++ M LV +L++ +VL G
Sbjct: 9 RSSSVLLRS---QVRLLHVGDANVLHSEVDKQSAEYKENAREMASLVGDLRNFTSQVLKG 65
Query: 65 GGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELY-EETLQSGGIITGIGPV 123
GG+ A++R+ SR KLL RERI+ L D GS FLELS LAGHELY EE + SGGI+TG+G V
Sbjct: 66 GGQKAIERHTSRGKLLARERINLLLDKGSPFLELSALAGHELYGEEVVNSGGIVTGVGRV 125
Query: 124 HGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFP 183
G C+ VAND TVKGG+Y+PIT+KKHLRAQEIA + +LPCIYLVDSGGA LP+QA+VFP
Sbjct: 126 CGTECLVVANDATVKGGSYYPITVKKHLRAQEIAQENRLPCIYLVDSGGANLPRQADVFP 185
Query: 184 DKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPL 243
DK +FGRIFYNQA MSA+GIPQIA+V+GSCTAGGAY+PAMADES++VK GTIFLAGPPL
Sbjct: 186 DKLHFGRIFYNQANMSAQGIPQIAVVMGSCTAGGAYVPAMADESIIVKKQGTIFLAGPPL 245
Query: 244 VKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAG-------- 295
VKAATGEE+SAEDLGGA +HCKTSGV+D++A D+ H L L R I+ NL+++
Sbjct: 246 VKAATGEEVSAEDLGGADLHCKTSGVTDHYALDDEHALYLARQIVSNLNLSATNSYNDQL 305
Query: 296 -RQGEINGFQNINP--EYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKK 352
++N FQ P +EP YD +ELY I +L +SFD+R VIARIVDGS F EFKK
Sbjct: 306 MHSSQVN-FQTATPPSAVEEPRYDAEELYGIVGPNLTKSFDVREVIARIVDGSRFTEFKK 364
Query: 353 LYGTTLVTGFAKIFGQPVGIIGNNGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMV 412
LYG TLV GFAK++G VGI+GNNG+LF ESALKGAHFI+LC QRKIPLVFLQNITGFMV
Sbjct: 365 LYGETLVCGFAKLYGHTVGIVGNNGVLFSESALKGAHFIQLCAQRKIPLVFLQNITGFMV 424
Query: 413 GSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNAR 472
G +EANGIAK GAKMV AV+CA VPK T+I+GGS+GAGNY MCGRAYSP F+++WPN+R
Sbjct: 425 GRDAEANGIAKNGAKMVTAVACANVPKFTVIIGGSYGAGNYGMCGRAYSPRFLYMWPNSR 484
Query: 473 ISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDD 532
ISVMGG QAA V++Q+ +D++K+ G E++++E + KA +VE +E EG+ YYSTARLWDD
Sbjct: 485 ISVMGGTQAANVMAQITEDQRKRAGKEFSEEEAQKLKAPIVEMFEAEGSPYYSTARLWDD 544
Query: 533 GIIDPADTRKIIGFCISAALNRPVEDTKYGVFRM 566
GIIDPA+TR+I+G + AALN ++TK+GVFRM
Sbjct: 545 GIIDPANTRQILGLSLKAALNNAGQETKFGVFRM 578
>sp|Q5XIT9|MCCB_RAT Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus
norvegicus GN=Mccc2 PE=2 SV=1
Length = 563
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/570 (61%), Positives = 440/570 (77%), Gaps = 11/570 (1%)
Query: 1 MLGALVRRTAASVLKANSIRTRALH---LSVLPDAVDRNSEAFVRNSQVMQGLVSELQSH 57
M GAL R +A+ R RA H ++ L D S + N + M+ LV++L
Sbjct: 1 MWGAL-RSVLRPCSRASVPRQRAYHGDAVARLGTQPDSGSSTYQENYEQMKALVNQLHER 59
Query: 58 IQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELY-EETLQSGGI 116
Q V GG E A R+ SR KLLPR+RID L DPGS FLE SQ AG++LY EE + +GGI
Sbjct: 60 AQYVRLGGSEKARARHTSRGKLLPRDRIDNLIDPGSPFLEFSQFAGYKLYGEEEVPAGGI 119
Query: 117 ITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLP 176
ITGIG V G CM VAND TVKGGTY+P+T+KKH+RAQEIA Q +LPCIYLVDSGGA LP
Sbjct: 120 ITGIGRVSGVECMIVANDATVKGGTYYPVTVKKHVRAQEIALQNRLPCIYLVDSGGANLP 179
Query: 177 KQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTI 236
+QA+ FPD+++FGRIFYNQAIMS++ I QIA+V+GSCTAGGAY+PAMADE+++V+ GTI
Sbjct: 180 RQADTFPDRDHFGRIFYNQAIMSSKNITQIAVVMGSCTAGGAYVPAMADENIIVQRQGTI 239
Query: 237 FLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGR 296
FLAGPPLVKAATGEE+SAEDLGGA +HC+ SGV+D++A D+ H L L R ++++L+
Sbjct: 240 FLAGPPLVKAATGEEVSAEDLGGADLHCRRSGVTDHYALDDHHALHLTRKVVRSLNY--- 296
Query: 297 QGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGT 356
Q +++ + P +EPL+ ELY I A+LK+SFD+R VIARIVDGS F+EFK LYG
Sbjct: 297 QKKLD--VTVEPS-EEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFNEFKALYGD 353
Query: 357 TLVTGFAKIFGQPVGIIGNNGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRS 416
TLVTGFA+IFG PVGIIGNNG+LF ESA KGAHF++LC QR IPL+FLQNITGFMVG
Sbjct: 354 TLVTGFARIFGYPVGIIGNNGVLFSESAKKGAHFVQLCCQRNIPLLFLQNITGFMVGKDY 413
Query: 417 EANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVM 476
EA GIAK GAKMV AVSCAKVPK+T+I+GGS+GAGNY MCGRAYSP F+++WPNARISVM
Sbjct: 414 EAEGIAKDGAKMVAAVSCAKVPKITVIIGGSYGAGNYGMCGRAYSPRFLYMWPNARISVM 473
Query: 477 GGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIID 536
GG QAA VL+ V +D++ ++G +++ EE K +++ +E+EGN YYS+ARLWDDGIID
Sbjct: 474 GGEQAATVLATVARDQRAREGKQFSSAEEAALKEPIIKRFEEEGNPYYSSARLWDDGIID 533
Query: 537 PADTRKIIGFCISAALNRPVEDTKYGVFRM 566
P DTR ++G ISAALN P++ T +G+FRM
Sbjct: 534 PVDTRLVLGLSISAALNAPIQRTDFGIFRM 563
>sp|Q3ULD5|MCCB_MOUSE Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Mus
musculus GN=Mccc2 PE=2 SV=1
Length = 563
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/570 (61%), Positives = 435/570 (76%), Gaps = 11/570 (1%)
Query: 1 MLGALVRRTAASVLKANSIRTRALH---LSVLPDAVDRNSEAFVRNSQVMQGLVSELQSH 57
M GAL R +A RA H ++ L D S + N + M+ LVS+L
Sbjct: 1 MWGAL-RSALRPCCRAAVPPQRAYHGDSVARLGTQPDSASSTYQENYEQMKALVSQLHER 59
Query: 58 IQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELY-EETLQSGGI 116
Q V GG E A R+ SR KLLPR+RID L DPGS FLE SQ AG++LY +E + +GGI
Sbjct: 60 AQYVRLGGSEKARARHTSRGKLLPRDRIDNLIDPGSPFLEFSQFAGYQLYGDEEVPAGGI 119
Query: 117 ITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLP 176
ITGIG V G CM VAND TVKGGTY+P+T+KKH+RAQEIA Q +LPCIYLVDSGGA LP
Sbjct: 120 ITGIGRVSGVECMIVANDATVKGGTYYPVTVKKHVRAQEIALQNRLPCIYLVDSGGANLP 179
Query: 177 KQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTI 236
+QA+ FPD+++FGRIFYNQAIMS++ I QIA+V+GSCTAGGAY+PAMADE+++V+ GTI
Sbjct: 180 RQADTFPDRDHFGRIFYNQAIMSSKNITQIAVVMGSCTAGGAYVPAMADENIIVQKQGTI 239
Query: 237 FLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGR 296
FLAGPPLVKAATGEE+SAEDLGGA +HC+ SGV+D++A D+ H L L R ++++L+ +
Sbjct: 240 FLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVTDHYALDDHHALHLTRKVVRSLNYQKK 299
Query: 297 QGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGT 356
I P +EPL+ ELY I A+LK+SFD+R VIARIVDGS F+EFK LYG
Sbjct: 300 MD-----VTIEPS-EEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFNEFKALYGD 353
Query: 357 TLVTGFAKIFGQPVGIIGNNGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRS 416
TLVTGFA+IFG PVGIIGNNG+LF ESA KGAHF++LC QR IPL+FLQNITGFMVG
Sbjct: 354 TLVTGFARIFGYPVGIIGNNGVLFSESAKKGAHFVQLCCQRNIPLLFLQNITGFMVGRDY 413
Query: 417 EANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVM 476
EA GIAK GAKMV AV+CAKVPK+T+I+GGS+GAGNY MCGRAYSP F+++WPNARISVM
Sbjct: 414 EAEGIAKDGAKMVAAVACAKVPKITVIIGGSYGAGNYGMCGRAYSPRFLYMWPNARISVM 473
Query: 477 GGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIID 536
GG QAA VL+ V +D+K ++G +++ EE K +++ +E+EGN YYS+ARLWDDGIID
Sbjct: 474 GGEQAATVLATVARDQKAREGKQFSSAEEAALKEPIIKRFEEEGNPYYSSARLWDDGIID 533
Query: 537 PADTRKIIGFCISAALNRPVEDTKYGVFRM 566
P DTR ++G +SAALN P++ T +G+FRM
Sbjct: 534 PVDTRLVLGLSLSAALNAPIQRTDFGIFRM 563
>sp|P34385|MCCB_CAEEL Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
OS=Caenorhabditis elegans GN=F02A9.4 PE=2 SV=1
Length = 608
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/544 (61%), Positives = 430/544 (79%), Gaps = 7/544 (1%)
Query: 24 LHLSVLPDAVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRE 83
L + + ++D +S+ F N+ M+ LV +L++ I K+ GGE AVK +RSR K+L RE
Sbjct: 71 LQWAPIKTSIDNSSDDFAANTAEMKVLVEDLKAKISKIEQAGGEKAVKLHRSRGKMLARE 130
Query: 84 RIDRLTDPGSSFLELSQLAGHELY-EETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTY 142
RID + D GS F+E SQLAG+E+Y +E + SGGI+TG+G V GR+C+ VAND TVKGGTY
Sbjct: 131 RIDGIVDAGSPFIEFSQLAGYEMYGKEEVPSGGILTGVGIVSGRVCVIVANDATVKGGTY 190
Query: 143 FPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEG 202
+PIT+KKHLRAQEIA + KLPCIYLVDSGGA LP+QA++F D ++FGRIFYNQA MS+EG
Sbjct: 191 YPITVKKHLRAQEIARENKLPCIYLVDSGGANLPRQADIFADSQHFGRIFYNQATMSSEG 250
Query: 203 IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAV 262
IPQ+A+V+GSCTAGGAY+PAM+D++++VKG GT+FL GPPLVKAATGEEISAE+LGGA +
Sbjct: 251 IPQLAVVMGSCTAGGAYVPAMSDQAIIVKGTGTVFLGGPPLVKAATGEEISAEELGGADL 310
Query: 263 HCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYDVKELYS 322
HC SGV+DY+A ++ H L L R+ I L + NP EPLY +E+Y
Sbjct: 311 HCGESGVTDYYAHNDKHALYLARSCIAGLP------PVEEHMTFNPNADEPLYPAEEIYG 364
Query: 323 IAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNNGILFHE 382
I ++LK+++D+R VIARIVDGS F EFK+ YG TLVTGFA I+GQ VGI+ NNG+LF E
Sbjct: 365 IVGSNLKKTYDVREVIARIVDGSRFHEFKERYGETLVTGFATIYGQRVGILANNGVLFAE 424
Query: 383 SALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTI 442
SA+KG+HFIELC QRKIPL+FLQNITGFMVG +EA GIAK GAK+V AV+CAKVPK+T+
Sbjct: 425 SAMKGSHFIELCCQRKIPLLFLQNITGFMVGRDAEAGGIAKHGAKLVTAVACAKVPKITV 484
Query: 443 IVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTK 502
+VGGS+GAGNY MCGR YSP ++F+WPN+RISVMGG QAA VLS V+K+KKK++G +WT
Sbjct: 485 LVGGSYGAGNYGMCGRGYSPRYVFMWPNSRISVMGGEQAANVLSTVQKEKKKREGADWTD 544
Query: 503 QEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIIDPADTRKIIGFCISAALNRPVEDTKYG 562
Q++ + V E +EKEG+ Y+++ARLWDDG+IDP DTRK++G + L +P+ +TK+G
Sbjct: 545 QQDLELRKPVEEKFEKEGHPYFASARLWDDGVIDPKDTRKVLGLAFQSTLQKPIPETKFG 604
Query: 563 VFRM 566
VFRM
Sbjct: 605 VFRM 608
>sp|Q9HCC0|MCCB_HUMAN Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Homo
sapiens GN=MCCC2 PE=1 SV=1
Length = 563
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/569 (60%), Positives = 436/569 (76%), Gaps = 10/569 (1%)
Query: 2 LGALVRRTAASVLKANSIRTRALH---LSVLPDAVDRNSEAFVRNSQVMQGLVSELQSHI 58
+ A++R +A+ RA H ++ L D S + N + M+ LV++L +
Sbjct: 1 MWAVLRLALRPCARASPAGPRAYHGDSVASLGTQPDLGSALYQENYKQMKALVNQLHERV 60
Query: 59 QKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE-ETLQSGGII 117
+ + GGGE A + SR KLLPRERID L DPGS FLELSQ AG++LY+ E + GGII
Sbjct: 61 EHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGII 120
Query: 118 TGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPK 177
TGIG V G CM +AND TVKGG Y+P+T+KK LRAQEIA Q +LPCIYLVDSGGAYLP+
Sbjct: 121 TGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPR 180
Query: 178 QAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIF 237
QA+VFPD+++FGR FYNQAIMS++ I QIA+V+GSCTAGGAY+PAMADE+++V+ GTIF
Sbjct: 181 QADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIF 240
Query: 238 LAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQ 297
LAGPPLVKAATGEE+SAEDLGGA +HC+ SGVSD++A D+ H L L R +++NL+ Q
Sbjct: 241 LAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNY---Q 297
Query: 298 GEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTT 357
+++ I P +EPL+ ELY I A+LK+SFD+R VIARIVDGS F EFK YG T
Sbjct: 298 KKLD--VTIEPS-EEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDT 354
Query: 358 LVTGFAKIFGQPVGIIGNNGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSE 417
LVTGFA+IFG PVGI+GNNG+LF ESA KG HF++LC QR IPL+FLQNITGFMVG E
Sbjct: 355 LVTGFARIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYE 414
Query: 418 ANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMG 477
A GIAK GAKMV AV+CA+VPK+T+I+GGS+GAGNY MCGRAYSP F+++WPNARISVMG
Sbjct: 415 AEGIAKDGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMG 474
Query: 478 GAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIIDP 537
G QAA VL+ + KD++ ++G +++ +E K +++ +E+EGN YYS+AR+WDDGIIDP
Sbjct: 475 GEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKFEEEGNPYYSSARVWDDGIIDP 534
Query: 538 ADTRKIIGFCISAALNRPVEDTKYGVFRM 566
ADTR ++G SAALN P+E T +G+FRM
Sbjct: 535 ADTRLVLGLSFSAALNAPIEKTDFGIFRM 563
>sp|Q8T2J9|MCCB_DICDI Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
OS=Dictyostelium discoideum GN=mccb PE=3 SV=2
Length = 588
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/564 (59%), Positives = 434/564 (76%), Gaps = 10/564 (1%)
Query: 7 RRTAASVLKAN-SIRTRALHLSVLPDAVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGGG 65
+ ++ S+LK N S T ++L +D+NS + N M + +L+ +I+K+ GG
Sbjct: 31 KLSSKSLLKINYSSSTTDRTFNILDGTIDKNSAEYKDNLINMNSTLKQLKENIEKIKLGG 90
Query: 66 GESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELY-EETLQSGGIITGIGPVH 124
GE ++N SR KLL RERI+ L D GS FLE SQLAG +Y +E + +GGIITGIG +H
Sbjct: 91 GEKLNQKNISRGKLLVRERIEALIDVGSPFLEFSQLAGWGMYGKEEVAAGGIITGIGKIH 150
Query: 125 GRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPD 184
G C+ VAND TVKGGTYFPIT+KKHLRAQEIA + LPCIYLVDSGGA LP+QA+VFPD
Sbjct: 151 GVECVIVANDSTVKGGTYFPITVKKHLRAQEIAQENNLPCIYLVDSGGANLPRQADVFPD 210
Query: 185 KENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLV 244
+++FGRIF+NQA MSA+ IPQIA+V+GSCTAGGAY+PAMADESV+VKG GTIFL GPPLV
Sbjct: 211 RDHFGRIFFNQANMSAKRIPQIAVVMGSCTAGGAYVPAMADESVIVKGTGTIFLGGPPLV 270
Query: 245 KAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQ 304
KAATGE +++E+LGGA +HC+TSGV+D++A+D+ +++ R I+ NL+ + +
Sbjct: 271 KAATGEIVTSEELGGADLHCRTSGVTDHYARDDAEAIAITRRIVSNLNRKKQPSPVI--- 327
Query: 305 NINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAK 364
E +EPLY EL I P+DLK++FDIR VIAR+VDGS FDEFK+LYGTTL+ GFA+
Sbjct: 328 ---TETEEPLYPTSELAGIVPSDLKKNFDIRKVIARLVDGSRFDEFKELYGTTLICGFAR 384
Query: 365 IFGQPVGIIGNNGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKA 424
+ G PVGII NNGILF ESA+KGAHFIELC QR IPLVFLQNITGFMVG E+ GIAK
Sbjct: 385 VHGMPVGIIANNGILFSESAVKGAHFIELCNQRGIPLVFLQNITGFMVGKTYESKGIAKD 444
Query: 425 GAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGV 484
GAKMVMAV+ AKVPK+T+I+GGSFGAGNY MCGR+YSP F+++WPNA+ISVMGG QAA V
Sbjct: 445 GAKMVMAVATAKVPKITMIIGGSFGAGNYGMCGRSYSPRFLYMWPNAKISVMGGEQAASV 504
Query: 485 LSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIIDPADTRKII 544
L+Q++KD K+ +W+ +EE FK + + +E+EG+ YYS+AR WDDG+IDP D+RK+I
Sbjct: 505 LAQIQKDNMAKENKQWSPEEENTFKKPISDKFEEEGSIYYSSARCWDDGVIDPQDSRKVI 564
Query: 545 GFCISAALNRPVEDTK--YGVFRM 566
+SA +N+P+ +GVFRM
Sbjct: 565 ALSLSACMNQPINPPSDGFGVFRM 588
>sp|O31825|YNGE_BACSU Uncharacterized carboxylase YngE OS=Bacillus subtilis (strain 168)
GN=yngE PE=3 SV=2
Length = 511
Score = 322 bits (825), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 188/497 (37%), Positives = 270/497 (54%), Gaps = 27/497 (5%)
Query: 53 ELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYEETLQ 112
E +++ GG E + NR + KL RER+ L D +EL E + L
Sbjct: 8 ERTERAERIRKGGAEKYHQSNREKGKLFVRERLSLLFDDD---IELEDAFFAECMSDGLP 64
Query: 113 SGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGG 172
+ G++T IG + G+ +AND TVK G++ T++K +R QEIA + P IYLVDS G
Sbjct: 65 ADGVVTAIGKIGGQTVCVMANDSTVKAGSWGAKTVEKIIRIQEIAEKLNCPLIYLVDSAG 124
Query: 173 AYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKG 232
A + Q VFP + GRIFYNQ +S IPQI L+ G AGGAYIPA D VMV G
Sbjct: 125 ARITDQINVFPGRRGAGRIFYNQVKLSGR-IPQICLLFGPSAAGGAYIPAFCDIVVMVDG 183
Query: 233 NGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLH 292
N +++L P + + GE++S E++GGA +HC SG D A+ E + L R +
Sbjct: 184 NASMYLGSPRMAEMVIGEKVSLEEMGGARMHCSISGCGDILAETEEEAIQLVRAYLSYFP 243
Query: 293 MAGRQGEINGFQNINP--EYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEF 350
FQ P E + P + L + P + FD+ +I R++D F E
Sbjct: 244 A--------NFQEKAPIHEKRPPKHFETPLADVIPQNQNAPFDMHELIERVIDEDSFFEI 295
Query: 351 KKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQRKIPLVFLQ 405
K L+ L+TG A+I GQPVGI+ N G+LFH+SA K A FI LC IPL+FL
Sbjct: 296 KALFAPELLTGLARIHGQPVGIVANQPKVKGGVLFHDSADKAAKFITLCDAFHIPLLFLA 355
Query: 406 NITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFM 465
+I GFM+G++ E GI + GAKM+ A+S A VPK+++IV ++GAG YAM G A+ P+
Sbjct: 356 DIPGFMIGTKVEQAGIIRHGAKMISAMSEATVPKLSVIVRKAYGAGLYAMAGPAFEPDCC 415
Query: 466 FLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYS 525
P A+I+VMG A + K+ E ++E F + E Y+++ N Y
Sbjct: 416 LALPTAQIAVMGPEAAVNAVY-------AKKIAELPEEERAAFISSKREEYKEDINIYRL 468
Query: 526 TARLWDDGIIDPADTRK 542
+ + D +I PA++ +
Sbjct: 469 ASEMIIDAVI-PANSLR 484
>sp|Q8GBW6|12S_PROFR Methylmalonyl-CoA carboxyltransferase 12S subunit
OS=Propionibacterium freudenreichii subsp. shermanii
PE=1 SV=3
Length = 611
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 166/518 (32%), Positives = 267/518 (51%), Gaps = 36/518 (6%)
Query: 44 SQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAG 103
+ M+G V +L Q + GGGE V++ S+ K RER++ L DP SF E+
Sbjct: 10 ASTMEGRVEQLAEQRQVIEAGGGERRVEKQHSQGKQTARERLNNLLDP-HSFDEVGAFRK 68
Query: 104 HE-----LYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAA 158
H + + + + G++TG G + GR + D TV GG+ K + E A
Sbjct: 69 HRTTLFGMDKAVVPADGVVTGRGTILGRPVHAASQDFTVMGGSAGETQSTKVVETMEQAL 128
Query: 159 QCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGA 218
P ++ DSGGA + + + +G++F+ +S +PQIA++ G C G +
Sbjct: 129 LTGTPFLFFYDSGGARIQEGIDSL---SGYGKMFFANVKLSGV-VPQIAIIAGPCAGGAS 184
Query: 219 YIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDEL 278
Y PA+ D +M K +F+ GP ++K+ TGE+++A++LGGA H SG + A+D+
Sbjct: 185 YSPALTDFIIMTK-KAHMFITGPQVIKSVTGEDVTADELGGAEAHMAISGNIHFVAEDDD 243
Query: 279 HGLSLGRNIIKNLHMAGRQGE--INGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRS 336
+ + ++ L + +N +++P EL I P D K+ +D+R
Sbjct: 244 AAELIAKKLLSFLPQNNTEEASFVNPNNDVSPN--------TELRDIVPIDGKKGYDVRD 295
Query: 337 VIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFI 391
VIA+IVD ++ E K Y T LVT FA++ G+ VGI+ N +G L ++ K A F+
Sbjct: 296 VIAKIVDWGDYLEVKAGYATNLVTAFARVNGRSVGIVANQPSVMSGCLDINASDKAAEFV 355
Query: 392 ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAG 451
C IPLV L ++ GF+ G + E GI + GAKM+ A S A VPK+T+++ ++G
Sbjct: 356 NFCDSFNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGS 415
Query: 452 NYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAK 511
AMC R + ++ WP+A I+VMG AA V+ + E + + +A+
Sbjct: 416 YLAMCNRDLGADAVYAWPSAEIAVMGAEGAANVIFRKEIK---------AADDPDAMRAE 466
Query: 512 VVEAYEKEGNA-YYSTARLWDDGIIDPADTRKIIGFCI 548
+E Y+ N Y + AR D +IDPADTR+ I +
Sbjct: 467 KIEEYQNAFNTPYVAAARGQVDDVIDPADTRRKIASAL 504
>sp|P54541|PCCB_BACSU Putative propionyl-CoA carboxylase beta chain OS=Bacillus subtilis
(strain 168) GN=yqjD PE=3 SV=2
Length = 507
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 245/485 (50%), Gaps = 29/485 (5%)
Query: 64 GGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELY--EETLQSGGIITGIG 121
GGG + + R + KL RERI L D SF+EL ++ E+ + G++TG G
Sbjct: 18 GGGREKLAQQRQKGKLTARERIIFLLDQ-DSFIELHPFMESQVLTREQRMLGDGVVTGYG 76
Query: 122 PVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEV 181
+ GR A D TV GG +K ++AA+ K P I L DSGGA + E
Sbjct: 77 TIDGRSVYVFAQDFTVYGGALGETHARKICALMDLAAKNKAPIIGLNDSGGARI---QEG 133
Query: 182 FPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGP 241
+ +G IFY + S IPQI+++LG C G Y PA+ D M + G +F+ GP
Sbjct: 134 VLSLDGYGHIFYRNVLYSGV-IPQISVILGPCAGGAVYSPALTDFIFMAEQTGRMFITGP 192
Query: 242 PLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEIN 301
+++ TGE++ AE LGGA +H SG + + E L+ R ++ L + GR E
Sbjct: 193 KVIEKVTGEQVDAESLGGAGIHNAVSGNAHFSGHTEKEVLTGVRKLLSYLPLNGRTTE-- 250
Query: 302 GFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTG 361
E PL L + PAD + +D+R VI + D F E + + +V G
Sbjct: 251 --PKPEKEASRPL-----LNRLVPADTTKPYDVRKVIRELADPQSFFEIQPFFAKNIVIG 303
Query: 362 FAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRS 416
FA++ + +GI+ + G L ++A K A FI C IPL+ ++++ GF+ G +
Sbjct: 304 FARLGEKAIGIVASQPKHLAGSLTIDAADKAARFIRFCDAFDIPLLTVEDVPGFLPGIQQ 363
Query: 417 EANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVM 476
E NGI + GAK++ A + A VPKVT+I+ ++G AM +A + +F WPNA I+VM
Sbjct: 364 EHNGIIRHGAKLLFAYAEATVPKVTLIIRKAYGGAYVAMNSKAIGADLVFAWPNAEIAVM 423
Query: 477 GGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIID 536
G AA +L EK+ K + TK+E K E ++ Y + A D II
Sbjct: 424 GPEGAASIL--YEKEIKASADPQKTKRE------KTAEYKKQNAGPYKAAACGMVDDIIL 475
Query: 537 PADTR 541
P ++R
Sbjct: 476 PEESR 480
>sp|P96885|PCC5_MYCTU Probable propionyl-CoA carboxylase beta chain 5 OS=Mycobacterium
tuberculosis GN=accD5 PE=1 SV=1
Length = 548
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 273/547 (49%), Gaps = 35/547 (6%)
Query: 17 NSIRTRALHLSVLPDAVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSR 76
S+ R+ H + +R++E + + G ++EL ++ L GE AV++ ++
Sbjct: 2 TSVTDRSAH------SAERSTEHTI-DIHTTAGKLAELHKRREESLHPVGEDAVEKVHAK 54
Query: 77 NKLLPRERIDRLTDPGSSFLELSQLAGHE-----LYEETLQSGGIITGIGPVHGR-LCMF 130
KL RERI L D SF+EL LA H L E+ G++TG G + GR +C+F
Sbjct: 55 GKLTARERIYALLDE-DSFVELDALAKHRSTNFNLGEKRPLGDGVVTGYGTIDGRDVCIF 113
Query: 131 VANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGR 190
+ D TV GG+ + +K ++ QE+A + P I + D GA + E + R
Sbjct: 114 -SQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGARI---QEGVVSLGLYSR 169
Query: 191 IFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGE 250
IF N I+++ IPQI+L++G+ G Y PA+ D +MV +F+ GP ++K TGE
Sbjct: 170 IFRNN-ILASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFITGPDVIKTVTGE 228
Query: 251 EISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPE- 309
E++ E+LGGA H SG + Y A E R ++ L + +Q P
Sbjct: 229 EVTMEELGGAHTHMAKSGTAHYAASGEQDAFDYVRELLSYL-PPNNSTDAPRYQAAAPTG 287
Query: 310 -YKEPLYDVK-ELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFG 367
+E L D EL ++ P Q +D+ VI R++D EF E + Y +V GF +I G
Sbjct: 288 PIEENLTDEDLELDTLIPDSPNQPYDMHEVITRLLD-DEFLEIQAGYAQNIVVGFGRIDG 346
Query: 368 QPVGIIGNN-----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIA 422
+PVGI+ N G L ++ K A F+ C IP+V L ++ GF+ G+ E NGI
Sbjct: 347 RPVGIVANQPTHFAGCLDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGII 406
Query: 423 KAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAA 482
+ GAK++ A A VPK+T+I ++G M + + WP A+I+VMG + A
Sbjct: 407 RRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAV 466
Query: 483 GVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKE-GNAYYSTARLWDDGIIDPADTR 541
G + + + + G + K + ++ + YE N Y + R + D +I P+ TR
Sbjct: 467 GFVYRQQLAEAAANGEDIDK-----LRLRLQQEYEDTLVNPYVAAERGYVDAVIPPSHTR 521
Query: 542 KIIGFCI 548
IG +
Sbjct: 522 GYIGTAL 528
>sp|P53003|PCCB_SACEN Propionyl-CoA carboxylase beta chain OS=Saccharopolyspora erythraea
(strain NRRL 23338) GN=pccB PE=3 SV=2
Length = 546
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 253/507 (49%), Gaps = 24/507 (4%)
Query: 49 GLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHE--- 105
G +++L + + G E AV + ++ K RERID L D GS F+EL + A H
Sbjct: 23 GKLADLYRRNHEAVHAGSERAVAKQHAKGKRTARERIDMLLDEGS-FVELDEHARHRSTN 81
Query: 106 --LYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLP 163
+ + G++TG G V GR + D TV GG+ + +K ++ ++A + P
Sbjct: 82 FGMDADRPYGDGVVTGWGTVDGRRVCVFSQDFTVFGGSLGEVFGEKIVKVMDLAMKTGCP 141
Query: 164 CIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAM 223
+ + DSGGA + + + IF S IPQI+L++G C G Y PA+
Sbjct: 142 LVGINDSGGARIQEGVAAL---GLYAEIFKRNTHASGV-IPQISLIMGPCAGGAVYSPAI 197
Query: 224 ADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSL 283
D +VMV +F+ GP ++K TGE++S EDLGGA H + SG + Y A DE +S
Sbjct: 198 TDFTVMVDQTSHMFITGPDVIKTVTGEDVSFEDLGGARTHNERSGNAHYLATDEDDAISY 257
Query: 284 GRNIIKNLHMAGRQGE--INGFQNINPEYKEPLYDVK-ELYSIAPADLKQSFDIRSVIAR 340
+ ++ L G + + + D EL ++ P Q +D+R VI R
Sbjct: 258 VKELLSFLPSNNLSSSPVFPGAEVEEGSVADGVGDADLELDALVPDSPNQPYDMREVITR 317
Query: 341 IVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCT 395
+VD EF E L+ ++ GF +I G VG++ N G L +++ K A F+ C
Sbjct: 318 LVDEGEFLEVSALFAPNMLCGFGRIEGASVGVVANQPMQLAGTLDIDASEKAARFVRFCD 377
Query: 396 QRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAM 455
IP++ L ++ GF+ G+ E NGI + GAK++ A + A VP VT+I ++G M
Sbjct: 378 AFNIPVLTLVDVPGFLPGTGQEWNGIIRRGAKLLYAYAEATVPLVTVITRKAYGGAYDVM 437
Query: 456 CGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEA 515
+ + WP A+I+VMG AA +L + + + ++G ++ E +A++ +
Sbjct: 438 GSKHLGADINLAWPTAQIAVMGAQGAANILYRRQLAEAAERG-----EDVEALRARLQQE 492
Query: 516 YEKE-GNAYYSTARLWDDGIIDPADTR 541
YE N Y + R + D +I P+ TR
Sbjct: 493 YEDTLCNPYVAAERGYVDSVIPPSHTR 519
>sp|P53002|PCCB_MYCLE Probable propionyl-CoA carboxylase beta chain 5 OS=Mycobacterium
leprae (strain TN) GN=accD5 PE=3 SV=1
Length = 549
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 268/542 (49%), Gaps = 48/542 (8%)
Query: 32 AVDRNSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDP 91
+++R +E + N G ++EL ++ L G +A ++ ++ K RERI L D
Sbjct: 11 SMERAAEHTI-NIHTTAGKLAELHKRTEEALHPVGAAAFEKVHAKGKFTARERIYALLD- 68
Query: 92 GSSFLELSQLAGHE-----LYEETLQSGGIITGIGPVHGR-LCMFVANDPTVKGGTYFPI 145
SF+EL LA H L E G++TG G + GR +C+F + D TV GG+ +
Sbjct: 69 DDSFVELDALARHRSTNFGLGENRPVGDGVVTGYGTIDGRDVCIF-SQDVTVFGGSLGEV 127
Query: 146 TIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQ 205
+K ++ QE+A + P I + D GA + E + RIF N I+++ IPQ
Sbjct: 128 YGEKIVKVQELAIKTGRPLIGINDGAGARI---QEGVVSLGLYSRIFRNN-ILASGVIPQ 183
Query: 206 IALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCK 265
I+L++G+ G Y PA+ D VMV +F+ GP ++K TGE+++ E+LGGA H
Sbjct: 184 ISLIMGAAAGGHVYSPALTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMA 243
Query: 266 TSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPL----------- 314
SG + Y A E R+++ L N F + P Y +P+
Sbjct: 244 KSGTAHYVASGEQDAFDWVRDVLSYL-------PSNNFTDA-PRYSKPVPHGSIEDNLTA 295
Query: 315 YDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIG 374
D+ EL ++ P Q +D+ V+ R++D EF E + Y T +V G +I +PVGI+
Sbjct: 296 KDL-ELDTLIPDSPNQPYDMHEVVTRLLDEEEFLEVQAGYATNIVVGLGRIDDRPVGIVA 354
Query: 375 NNGILFH-----ESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMV 429
N I F ++ K A F+ +C IP+V L ++ GF+ G+ E +GI + GAK++
Sbjct: 355 NQPIQFAGCLDINASEKAARFVRVCDCFNIPIVMLVDVPGFLPGTEQEYDGIIRRGAKLL 414
Query: 430 MAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVE 489
A A VPK+T+I ++G M + + WP A+I+VMG + A G + + E
Sbjct: 415 FAYGEATVPKITVITRKAYGGAYCVMGSKNMGCDVNLAWPTAQIAVMGASGAVGFVYRKE 474
Query: 490 KDKKKKQGI---EWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIIDPADTRKIIGF 546
+ K G E Q ++ ++ +V N Y + R + D +I P+ TR I
Sbjct: 475 LAQAAKNGANVDELRLQLQQEYEDTLV-------NPYIAAERGYVDAVIPPSHTRGYIAT 527
Query: 547 CI 548
+
Sbjct: 528 AL 529
>sp|P79384|PCCB_PIG Propionyl-CoA carboxylase beta chain, mitochondrial OS=Sus scrofa
GN=PCCB PE=2 SV=1
Length = 539
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 251/531 (47%), Gaps = 51/531 (9%)
Query: 33 VDRNSEAFVRNSQVMQGLVSE-LQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDP 91
V R+ A VR+ V+E +++ Q L GGG+ + R KL RERI L DP
Sbjct: 17 VVRSLHAGVRSLCTQPVSVNERIENKRQAALLGGGQRRIDSQHKRGKLTARERISLLLDP 76
Query: 92 GSSFLELSQLAGHELYE-------ETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFP 144
GS F+E H + ++TG G ++GRL + D TV GG+
Sbjct: 77 GS-FIESDMFVEHRCADFGMAADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSG 135
Query: 145 ITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEG-I 203
+K + + A P I L DSGGA + + E + IF +SA G I
Sbjct: 136 AHAQKICKIMDQAMTVGAPVIGLNDSGGARIQEGVESL---AGYADIFLRN--VSASGVI 190
Query: 204 PQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVH 263
PQI+L++G C G Y PA+ D + MVK +F+ GP +VK+ T E+++ E+LGGA H
Sbjct: 191 PQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGARTH 250
Query: 264 CKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPLYD-----VK 318
SGV+ +++ L R L ++ N +P +D V
Sbjct: 251 TTMSGVAHRAFDNDVDALCNLREFFNYLPLS----------NQDPAPIRECHDPSDRLVP 300
Query: 319 ELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGN--- 375
EL ++ P + +++D+ +I IVD +F E Y ++ GFA++ G+ VGI+GN
Sbjct: 301 ELDTVVPLESTRAYDMVDIIYSIVDERDFFEIMPNYAKNIIVGFARMNGRTVGIVGNQPK 360
Query: 376 --NGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVS 433
+G L S++KGA F+ C IPL+ ++ GF+ G+ E GI + GAK++ A +
Sbjct: 361 VASGCLDINSSVKGARFVRFCDAFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFA 420
Query: 434 CAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKK 493
A VPK+T+I ++G M + + + WP A I+VMG
Sbjct: 421 EATVPKITVITRKAYGGAYDVMSSKHLCGDTNYAWPTAEIAVMGA--------------- 465
Query: 494 KKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWDDGIIDPADTRKII 544
K +E + E +A E EK N + + R + D II P+ TR I
Sbjct: 466 -KGAVEIIFKGHENVEAAQAEYIEKFANPFPAAVRGFVDDIIQPSSTRARI 515
>sp|Q2TBR0|PCCB_BOVIN Propionyl-CoA carboxylase beta chain, mitochondrial OS=Bos taurus
GN=PCCB PE=2 SV=1
Length = 539
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 239/509 (46%), Gaps = 48/509 (9%)
Query: 53 ELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE---- 108
+++ Q L GGG+ + R KL RERI L DPGS F+E H +
Sbjct: 38 RIENKRQAALLGGGQRRIDAQHKRGKLTARERISLLLDPGS-FVESDMFVEHRCADFGMA 96
Query: 109 ---ETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCI 165
++TG G ++GRL + D TV GG+ +K + + A P I
Sbjct: 97 ADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQALTVGAPVI 156
Query: 166 YLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMAD 225
L DSGGA + + E + IF S IPQI+L++G C G Y PA+ D
Sbjct: 157 GLNDSGGARIQEGVESL---AGYADIFLRNVTASGV-IPQISLIMGPCAGGAVYSPALTD 212
Query: 226 ESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGR 285
+ MVK +F+ GP +VK+ T E+++ E+LGGA H SGV+ ++++ L R
Sbjct: 213 FTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGARTHTTMSGVAHRAFENDVDALCNLR 272
Query: 286 NIIKNLHMAGRQGEINGFQNINPEYKEPLYD-----VKELYSIAPADLKQSFDIRSVIAR 340
L ++ N +P +D V EL +I P + +++++ +I
Sbjct: 273 EFFNYLPLS----------NQDPAPVLECHDPSDRLVPELDTIVPLESTKAYNMVDIIHA 322
Query: 341 IVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFIELCT 395
+VD EF E Y ++ GFA++ G+ VGI+GN +G L S++KGA F+ C
Sbjct: 323 VVDEREFFEIMPNYAKNIIVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCD 382
Query: 396 QRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAM 455
IPL+ ++ GF+ G+ E GI + GAK++ A + A VPKVT+I ++G M
Sbjct: 383 SFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKVTVITRKAYGGAYDVM 442
Query: 456 CGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEA 515
+ + + WP A I+VMG K +E + E +A E
Sbjct: 443 SSKHLCGDTNYAWPTAEIAVMGA----------------KGAVEIIFKGHENVEAAQAEY 486
Query: 516 YEKEGNAYYSTARLWDDGIIDPADTRKII 544
EK N + + R + D II P+ TR I
Sbjct: 487 IEKFANPFPAAVRGFVDDIIQPSSTRARI 515
>sp|P05166|PCCB_HUMAN Propionyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens
GN=PCCB PE=1 SV=3
Length = 539
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 240/509 (47%), Gaps = 48/509 (9%)
Query: 53 ELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE---- 108
+++ + L GGG+ + R KL RERI L DPGS F+E H +
Sbjct: 38 RIENKRRTALLGGGQRRIDAQHKRGKLTARERISLLLDPGS-FVESDMFVEHRCADFGMA 96
Query: 109 ---ETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCI 165
++TG G ++GRL + D TV GG+ +K + + A P I
Sbjct: 97 ADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAITVGAPVI 156
Query: 166 YLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMAD 225
L DSGGA + + E + IF S IPQI+L++G C G Y PA+ D
Sbjct: 157 GLNDSGGARIQEGVESL---AGYADIFLRNVTASGV-IPQISLIMGPCAGGAVYSPALTD 212
Query: 226 ESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGR 285
+ MVK +F+ GP +VK+ T E+++ E+LGGA H SGV+ ++++ L R
Sbjct: 213 FTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTMSGVAHRAFENDVDALCNLR 272
Query: 286 NIIKNLHMAGRQGEINGFQNINPEYKEPLYD-----VKELYSIAPADLKQSFDIRSVIAR 340
+ L ++ + +P +D V EL +I P + +++++ +I
Sbjct: 273 DFFNYLPLSSQ----------DPAPVRECHDPSDRLVPELDTIVPLESTKAYNMVDIIHS 322
Query: 341 IVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFIELCT 395
+VD EF E Y ++ GFA++ G+ VGI+GN +G L S++KGA F+ C
Sbjct: 323 VVDEREFFEIMPNYAKNIIVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCD 382
Query: 396 QRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAM 455
IPL+ ++ GF+ G+ E GI + GAK++ A + A VPKVT+I ++G M
Sbjct: 383 AFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKVTVITRKAYGGAYDVM 442
Query: 456 CGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEA 515
+ + + WP A I+VMG K +E + E +A E
Sbjct: 443 SSKHLCGDTNYAWPTAEIAVMGA----------------KGAVEIIFKGHENVEAAQAEY 486
Query: 516 YEKEGNAYYSTARLWDDGIIDPADTRKII 544
EK N + + R + D II P+ TR I
Sbjct: 487 IEKFANPFPAAVRGFVDDIIQPSSTRARI 515
>sp|P07633|PCCB_RAT Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus
norvegicus GN=Pccb PE=2 SV=1
Length = 541
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 237/509 (46%), Gaps = 48/509 (9%)
Query: 53 ELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE---- 108
+++ L GGG+ + R KL RERI L DPGS FLE H +
Sbjct: 40 RIENKRHAALLGGGQRRIDAQHKRGKLTARERISLLLDPGS-FLESDMFVEHRCADFGMA 98
Query: 109 ---ETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCI 165
++TG G ++GRL + D TV GG+ +K + + A P I
Sbjct: 99 AEKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAITVGAPVI 158
Query: 166 YLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMAD 225
L DSGGA + + E + IF S IPQI+L++G C G Y PA+ D
Sbjct: 159 GLNDSGGARIQEGVESL---AGYADIFLRNVTASGV-IPQISLIMGPCAGGAVYSPALTD 214
Query: 226 ESVMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGR 285
+ MVK +F+ GP VK+ T E+++ E LGGA H SGV+ +++ L R
Sbjct: 215 FTFMVKDTSYLFITGPEFVKSVTNEDVTQEQLGGAKTHTTVSGVAHRAFDNDVDALCNLR 274
Query: 286 NIIKNLHMAGRQGEINGFQNINPEYKEPLYD-----VKELYSIAPADLKQSFDIRSVIAR 340
+ L ++ N +P +D V EL ++ P + +++++ +I
Sbjct: 275 EFLNFLPLS----------NQDPASIRECHDPSDRLVPELDTVVPLESSKAYNMLDIIHA 324
Query: 341 IVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFIELCT 395
++D EF E Y +V GFA++ G+ VGI+GN +G L S++KGA F+ C
Sbjct: 325 VIDEREFFEIMPNYAKNIVIGFARMNGRTVGIVGNQPNVASGCLDINSSVKGARFVRFCD 384
Query: 396 QRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAM 455
IPL+ ++ GF+ G+ E GI + GAK++ A + A VPK+T+I ++G M
Sbjct: 385 AFSIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKITVITRKAYGGAYDVM 444
Query: 456 CGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEA 515
+ + + WP A I+VMG A ++ + +D + Q E
Sbjct: 445 SSKHLLGDTNYAWPTAEIAVMGAKGAVEIIFKGHEDVEAAQA----------------EY 488
Query: 516 YEKEGNAYYSTARLWDDGIIDPADTRKII 544
EK N + + R + D II P+ TR I
Sbjct: 489 VEKFANPFPAAVRGFVDDIIQPSSTRARI 517
>sp|Q99MN9|PCCB_MOUSE Propionyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus
GN=Pccb PE=1 SV=2
Length = 541
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 151/500 (30%), Positives = 234/500 (46%), Gaps = 48/500 (9%)
Query: 62 LGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYE-------ETLQSG 114
L GGG+ + R KL RERI L DPGS F+E H +
Sbjct: 49 LLGGGQRRIDAQHKRGKLTARERISLLLDPGS-FMESDMFVEHRCADFGMAADKNKFPGD 107
Query: 115 GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAY 174
++TG G ++GRL + D TV GG+ +K + + A P I L DSGGA
Sbjct: 108 SVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAITVGAPVIGLNDSGGAR 167
Query: 175 LPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNG 234
+ + E + IF S IPQI+L++G C G Y PA+ D + MVK
Sbjct: 168 IQEGVESL---AGYADIFLRNVTASGV-IPQISLIMGPCAGGAVYSPALTDFTFMVKDTS 223
Query: 235 TIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMA 294
+F+ GP +VK+ T E+++ E LGGA H SGV+ +++ L R L ++
Sbjct: 224 YLFITGPEVVKSVTNEDVTQEQLGGAKTHTTVSGVAHRAFDNDVDALCNLREFFNFLPLS 283
Query: 295 GRQGEINGFQNINPEYKEPLYD-----VKELYSIAPADLKQSFDIRSVIARIVDGSEFDE 349
+ +P +D V EL ++ P + +++++ +I ++D EF E
Sbjct: 284 SQ----------DPAPIRECHDPSDRLVPELDTVVPLESSKAYNMLDIIHAVIDEREFFE 333
Query: 350 FKKLYGTTLVTGFAKIFGQPVGIIGN-----NGILFHESALKGAHFIELCTQRKIPLVFL 404
Y +V GFA++ G+ VGI+GN +G L S++KGA F+ C IPL+
Sbjct: 334 IMPSYAKNIVVGFARMNGRTVGIVGNQPNVASGCLDINSSVKGARFVRFCDAFNIPLITF 393
Query: 405 QNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNF 464
++ GF+ G+ E GI + GAK++ A + A VPK+T+I ++G M + +
Sbjct: 394 VDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKITVITRKAYGGAYDVMSSKHLLGDT 453
Query: 465 MFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYY 524
+ WP A I+VMG A ++ + +D + Q E EK N +
Sbjct: 454 NYAWPTAEIAVMGAKGAVEIIFKGHQDVEAAQA----------------EYVEKFANPFP 497
Query: 525 STARLWDDGIIDPADTRKII 544
+ R + D II P+ TR I
Sbjct: 498 AAVRGFVDDIIQPSSTRARI 517
>sp|P63407|PCC6_MYCTU Probable propionyl-CoA carboxylase beta chain 6 OS=Mycobacterium
tuberculosis GN=accD6 PE=3 SV=1
Length = 473
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 233/487 (47%), Gaps = 36/487 (7%)
Query: 79 LLPRERIDRLTDPGSSFLELSQL---AGHELYEETLQSGGIITGIGPVHGRLCMFVANDP 135
++ E + DP L LS EL E +SG ++ G V+G + D
Sbjct: 3 IMAPEAVGESLDPRDPLLRLSNFFDDGSVELLHERDRSG-VLAAAGTVNGVRTIAFCTDG 61
Query: 136 TVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQ 195
TV GG + A + A + + P + + SGGA L + G++F +
Sbjct: 62 TVMGGAMGVEGCTHIVNAYDTAIEDQSPIVGIWHSGGARLAEGVRAL---HAVGQVF--E 116
Query: 196 AIMSAEG-IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISA 254
A++ A G IPQI++V+G G AY PA+ D VM +F+ GP +V++ TGE++
Sbjct: 117 AMIRASGYIPQISVVVGFAAGGAAYGPALTDVVVMAP-ESRVFVTGPDVVRSVTGEDVDM 175
Query: 255 EDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPL 314
LGG H K SGV A DEL GR ++ + +QG F E +
Sbjct: 176 ASLGGPETHHKKSGVCHIVADDELDAYDRGRRLVG---LFCQQGH---FDRSKAEAGD-- 227
Query: 315 YDVKELYSIAPADLKQSFDIRSVIARIVDG-SEFDEFKKLYGTTLVTGFAKIFGQPVGII 373
+++++ P ++++D+R ++ I+D + FDEF+ + ++V G ++ G+ VG++
Sbjct: 228 ---TDIHALLPESSRRAYDVRPIVTAILDADTPFDEFQANWAPSMVVGLGRLSGRTVGVL 284
Query: 374 GNN-----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKM 428
NN G L ESA K A F+ LC IPLV + ++ G++ G E G+ + GAK+
Sbjct: 285 ANNPLRLGGCLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAKL 344
Query: 429 VMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQV 488
+ A VP+VT++ ++G AM R+ + +F WP+A ++VMG A G+L
Sbjct: 345 LHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMGAKAAVGIL--- 401
Query: 489 EKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARL-WDDGIIDPADTRKIIGFC 547
KK+ + E E ++ +E+ S + D IDPA TR +
Sbjct: 402 ----HKKKLAAAPEHEREALHDQLAAEHERIAGGVDSALDIGVVDEKIDPAHTRSKLTEA 457
Query: 548 ISAALNR 554
++ A R
Sbjct: 458 LAQAPAR 464
>sp|P63408|PCC6_MYCBO Probable propionyl-CoA carboxylase beta chain 6 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=accD6 PE=3
SV=1
Length = 473
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 233/487 (47%), Gaps = 36/487 (7%)
Query: 79 LLPRERIDRLTDPGSSFLELSQL---AGHELYEETLQSGGIITGIGPVHGRLCMFVANDP 135
++ E + DP L LS EL E +SG ++ G V+G + D
Sbjct: 3 IMAPEAVGESLDPRDPLLRLSNFFDDGSVELLHERDRSG-VLAAAGTVNGVRTIAFCTDG 61
Query: 136 TVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQ 195
TV GG + A + A + + P + + SGGA L + G++F +
Sbjct: 62 TVMGGAMGVEGCTHIVNAYDTAIEDQSPIVGIWHSGGARLAEGVRAL---HAVGQVF--E 116
Query: 196 AIMSAEG-IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEISA 254
A++ A G IPQI++V+G G AY PA+ D VM +F+ GP +V++ TGE++
Sbjct: 117 AMIRASGYIPQISVVVGFAAGGAAYGPALTDVVVMAP-ESRVFVTGPDVVRSVTGEDVDM 175
Query: 255 EDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEYKEPL 314
LGG H K SGV A DEL GR ++ + +QG F E +
Sbjct: 176 ASLGGPETHHKKSGVCHIVADDELDAYDRGRRLVG---LFCQQGH---FDRSKAEAGD-- 227
Query: 315 YDVKELYSIAPADLKQSFDIRSVIARIVDG-SEFDEFKKLYGTTLVTGFAKIFGQPVGII 373
+++++ P ++++D+R ++ I+D + FDEF+ + ++V G ++ G+ VG++
Sbjct: 228 ---TDIHALLPESSRRAYDVRPIVTAILDADTPFDEFQANWAPSMVVGLGRLSGRTVGVL 284
Query: 374 GNN-----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKM 428
NN G L ESA K A F+ LC IPLV + ++ G++ G E G+ + GAK+
Sbjct: 285 ANNPLRLGGCLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAKL 344
Query: 429 VMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQV 488
+ A VP+VT++ ++G AM R+ + +F WP+A ++VMG A G+L
Sbjct: 345 LHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMGAKAAVGIL--- 401
Query: 489 EKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARL-WDDGIIDPADTRKIIGFC 547
KK+ + E E ++ +E+ S + D IDPA TR +
Sbjct: 402 ----HKKKLAAAPEHEREALHDQLAAEHERIAGGVDSALDIGVVDEKIDPAHTRSKLTEA 457
Query: 548 ISAALNR 554
++ A R
Sbjct: 458 LAQAPAR 464
>sp|Q06101|PCCB_RHOER Propionyl-CoA carboxylase beta chain OS=Rhodococcus erythropolis
GN=pccB PE=3 SV=1
Length = 476
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 215/426 (50%), Gaps = 37/426 (8%)
Query: 71 KRNRSRNKLLPRERIDRLTDPGSSFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMF 130
K S + P R++ L DPG++ ++ G++ G + G +
Sbjct: 9 KSESSTDPRDPLARLENLFDPGTTVPLHAR-----------DKSGVLAASGNIDGVRTIA 57
Query: 131 VANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGR 190
+D TV GG K ++A + A + + P + L SGGA L + E G
Sbjct: 58 YCSDATVMGGAMGVDGCKHLVKAIDTAIEEESPIVGLWHSGGARLAEGVEAL---HAVGL 114
Query: 191 IFYNQAIMSAEG-IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATG 249
+F +A++ A G IPQI++VLG G AY PA+ D +M G +F+ GP +V++ TG
Sbjct: 115 VF--EAMVRASGLIPQISVVLGFAAGGAAYGPALTDVVIMAP-EGRVFVTGPDVVRSVTG 171
Query: 250 EEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPE 309
E++ LGG H K SGV+ A DE L R ++ M QGE + +
Sbjct: 172 EQVDMVSLGGPDTHTKKSGVAHIAAHDEADALHRARRLVS---MMCEQGEFD-------Q 221
Query: 310 YKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDG----SEFDEFKKLYGTTLVTGFAKI 365
L D +L ++ PA K+++D+R ++ ++D S F+E + Y ++VTGF ++
Sbjct: 222 RAAELGD-SDLRAMMPASAKRAYDVRPIVHEMLDNVEGESSFEELQGNYARSIVTGFGRM 280
Query: 366 FGQPVGIIGNN----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGI 421
G+ VG+I NN G L ESA K A F+ LC +PLV + ++ G++ G E G+
Sbjct: 281 AGRTVGVIANNPLRLGCLNSESAEKAARFVRLCNAFGVPLVVVVDVPGYLPGVSMEWEGV 340
Query: 422 AKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQA 481
+ GAK++ A + A VP+VT++ +G AM RA +F WPN+ ++VMG A
Sbjct: 341 VRRGAKLLHAFAEATVPRVTVVTRKIYGGAYIAMNSRALGATAVFAWPNSEVAVMGAKAA 400
Query: 482 AGVLSQ 487
G+L +
Sbjct: 401 VGILHK 406
>sp|Q06700|GCDA_ACIFV Glutaconyl-CoA decarboxylase subunit alpha OS=Acidaminococcus
fermentans (strain ATCC 25085 / DSM 20731 / VR4) GN=gcdA
PE=1 SV=1
Length = 587
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 140/564 (24%), Positives = 248/564 (43%), Gaps = 71/564 (12%)
Query: 36 NSEAFVRNSQVMQGLVSELQSHIQKVLGGGGESAVKRNRSRNKLLPRERIDRLTDPGSSF 95
N E + + + L+ E Q G ++ V + R +L +RI++L +PGS +
Sbjct: 27 NEEQLKKIEEEIHQLIKEAQE------AGKADADVNK---RGELTALQRIEKLVEPGS-W 76
Query: 96 LELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQE 155
L+ L + + S I+ G+G V+G+ C+ VA+D G + P + LRA +
Sbjct: 77 RPLNTLFNPQGNKNG--SVAIVKGLGRVNGKWCVVVASDNKKLAGAWVPGQAECLLRASD 134
Query: 156 IAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTA 215
A +P +Y+++ G +Q +V+P++ G F+ A ++ GIP I + G+ A
Sbjct: 135 TAKTLHVPLVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNAELNQLGIPVIVGIYGTNPA 194
Query: 216 GGAY-------IPAMADESVMVKGNGTIFLAGPP-LVKAATGEEIS--------AEDLGG 259
GG Y I A ++ V G G + P V EI+ E G
Sbjct: 195 GGGYHSISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDRTGKTEPPGA 254
Query: 260 AAVHCKTSG-VSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPEY------KE 312
+H +G + + +A +E G+ + G + + +PE+ K
Sbjct: 255 VDIHYTETGFMREVYASEE--GV-----------LEGIKKYVGMLPKYDPEFFRVDDPKA 301
Query: 313 PLYDVKELYSIAPADLKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFAKIFGQPVGI 372
P + +LYS+ P + K+++DI +VIAR+ D SE E+KK YG +VTG AK+ G VG+
Sbjct: 302 PAFPADDLYSMVPLNDKRAYDIYNVIARLFDNSELHEYKKGYGPEMVTGLAKVNGLLVGV 361
Query: 373 IGN-------------------NGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVG 413
+ N G L+ + +K F+ LC + ++P+V++Q+ TG VG
Sbjct: 362 VANVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVG 421
Query: 414 SRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNA-- 471
+ +E + G ++ ++ + +P+ I + A +Y + G + F A
Sbjct: 422 NDAEKAELLGLGQSLIYSIQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAAT 481
Query: 472 RISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEEMFKAKVVEAYEKEGNAYYSTARLWD 531
I+VM G AA + K +K G + ++M +++A+ +
Sbjct: 482 EIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKM--NNLIQAFYTKSRPKVCAELGLV 539
Query: 532 DGIIDPADTRKIIGFCISAALNRP 555
D I+D R + AA P
Sbjct: 540 DEIVDMNKIRGYVEAFTEAAYQNP 563
>sp|C4Z8P1|ACCDA_EUBR3 Acetyl-coenzyme A carboxylase carboxyl transferase subunits
beta/alpha OS=Eubacterium rectale (strain ATCC 33656 /
VPI 0990) GN=accD PE=3 SV=1
Length = 589
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 163/407 (40%), Gaps = 45/407 (11%)
Query: 108 EETLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYL 167
E+T S GI+ G ++G + D G+ + +K A E A + +LP I
Sbjct: 120 EKTGLSEGIVIGKTKIYGEETVLGVIDSRFMMGSMGHVVGEKITSAFERATEERLPVILF 179
Query: 168 VDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADES 227
SGGA + E + S G+ + ++ T G AM +
Sbjct: 180 CCSGGA---RMQEGIISLMQMAKTSAAAKRHSEAGLLYVPVLTDPTTGGVTASFAMLGDI 236
Query: 228 VMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGRNI 287
++ + I AGP +++ G+++ E A + G D + E L + +
Sbjct: 237 ILAEPKALIGFAGPRVIEQTIGQKLP-EGFQRAEFQLE-HGFVDMIVERE----DLKKTL 290
Query: 288 IKNLHMAGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLK--QSFDIRSVIARI---- 341
K L A R G+ N +P + + Y+ EL A K + +D S +I
Sbjct: 291 YKILR-AHRP--TTGYANFDPLHSDDNYEPTELMKEREAKAKPFKVWDKVSAARQIKRLA 347
Query: 342 -VDGSE--FDEFKKLYGT-------TLVTGFAKIFGQPVGIIG-------------NNGI 378
VD + FDEF +L+G +V G A + GQPV +IG N G+
Sbjct: 348 SVDYMDYIFDEFMELHGDRYFRDDPAIVGGIAYLDGQPVTVIGVHKGKDLEDCAKRNYGM 407
Query: 379 LFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVP 438
E K ++ + P++ N +G G +E NG +A A+ + +S KVP
Sbjct: 408 PSPEGYRKALRLMKQAEKFNRPIITFVNTSGAYPGMEAEENGQGEAIARNLYEMSGIKVP 467
Query: 439 KVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVL 485
+ +++G G A+ N +++ NA S++ A +L
Sbjct: 468 ILCLMIGEGGSGGALALS----VGNEVWMMENATYSILSPEGFASIL 510
>sp|Q98FX7|ACCA_RHILO Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Rhizobium loti (strain MAFF303099) GN=accA PE=3 SV=1
Length = 316
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 347 FDEFKKLYGT-------TLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
F +F L G +V GFA+ G+PV IIG N G + E K
Sbjct: 80 FSDFTPLAGDRNFGEDQAIVGGFARFRGEPVAIIGQEKGSDTTSRLRHNFGSVRPEGYRK 139
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGG 446
+EL + KIPL+ L + G G +E G A+A A+ A KVP +++++G
Sbjct: 140 AVRLMELADRFKIPLLTLVDTAGAYPGVGAEERGQAEAIARSTSACLALKVPSISVVIGE 199
Query: 447 SFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQVEKDKKKKQGIEWTKQEEE 506
G A+ + N +++ +A SV+ AA +L + + + K ++
Sbjct: 200 GGSGGAIAIA----TANRVYMLEHAIYSVISPEGAASILWR-DTTRSKDAATNMKITAQD 254
Query: 507 MFKAKVVEA 515
+ + K+++A
Sbjct: 255 LLELKIIDA 263
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 140 GTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMS 199
G+ P +K +R E+A + K+P + LVD+ GAY AE E R + +
Sbjct: 130 GSVRPEGYRKAVRLMELADRFKIPLLTLVDTAGAYPGVGAEERGQAEAIAR---STSACL 186
Query: 200 AEGIPQIALVLGSCTAGGAYIPAMADESVMV----------KGNGTIFLAGPPLVK-AAT 248
A +P I++V+G +GGA A A+ M+ +G +I K AAT
Sbjct: 187 ALKVPSISVVIGEGGSGGAIAIATANRVYMLEHAIYSVISPEGAASILWRDTTRSKDAAT 246
Query: 249 GEEISAEDL 257
+I+A+DL
Sbjct: 247 NMKITAQDL 255
>sp|B1XUY6|ACCA_POLNS Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Polynucleobacter necessarius subsp. necessarius
(strain STIR1) GN=accA PE=3 SV=1
Length = 323
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 20/202 (9%)
Query: 92 GSSFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVAN----DPTVKG----GTYF 143
G+ F + +L G + + II G+ + CM + + D + G
Sbjct: 77 GALFTDFHELHGDRTFAD---DQSIIGGLARFENQPCMVIGHQKGRDTKERALRNFGMSR 133
Query: 144 PITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGI 203
P +K +R +A + +P VD+ GA+ AE E GR Y QA + +
Sbjct: 134 PEGYRKAMRLMRLAEKFGIPVFTFVDTPGAFPGIDAEERNQSEAIGRNLYVQAELE---V 190
Query: 204 PQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLG 258
P IA ++G +GGA AM D +M++ N T + P L K A +AE LG
Sbjct: 191 PIIATIIGEGGSGGALAIAMGDAVLMLQ-NSTYSVISPEGCASILWKTADKASEAAEQLG 249
Query: 259 GAAVHCKTSGVSDYFAQDELHG 280
A K G+ D + + G
Sbjct: 250 LTAQRLKALGLIDKIVAEPIGG 271
>sp|A4SX64|ACCA_POLSQ Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Polynucleobacter necessarius subsp. asymbioticus
(strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) GN=accA
PE=3 SV=1
Length = 323
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 20/202 (9%)
Query: 92 GSSFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVAN----DPTVKG----GTYF 143
G F + +L G + + II G+ + CM + + D + G
Sbjct: 77 GGLFTDFHELHGDRTFAD---DQSIIGGLARFDSQPCMVIGHQKGRDTKERALRNFGMSR 133
Query: 144 PITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGI 203
P +K +R +A + +P VD+ GA+ AE E GR Y QA ++ +
Sbjct: 134 PEGYRKAMRLMRLAEKFSIPVFTFVDTPGAFPGIDAEERNQSEAIGRNLYVQAELT---V 190
Query: 204 PQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLG 258
P IA ++G +GGA AM D +M++ N T + P L K A +AE LG
Sbjct: 191 PIIATIIGEGGSGGALAIAMGDVVLMLQ-NSTYSVISPEGCASILWKTADKASEAAEQLG 249
Query: 259 GAAVHCKTSGVSDYFAQDELHG 280
A K G+ D + + G
Sbjct: 250 LTAQRIKALGLIDKIVAEPIGG 271
>sp|B5Y1I6|ACCA_KLEP3 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Klebsiella pneumoniae (strain 342) GN=accA PE=3 SV=1
Length = 319
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 94 SFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKG--------GTYFPI 145
+F E +LAG Y + I+ GI + GR M + + + G P
Sbjct: 82 AFDEFDELAGDRAYAD---DKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPE 138
Query: 146 TIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQ 205
+K LR E+A + K+P I +D+ GAY AE E R N MS +P
Sbjct: 139 GYRKALRLMEMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIAR---NLREMSRLSVPV 195
Query: 206 IALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGA 260
I V+G +GGA + D+ M++ T + P L K+A ++AE +G
Sbjct: 196 ICTVIGEGGSGGALAIGVGDKVNMLQ-YSTYSVISPEGCASILWKSADKAPLAAEAMGIV 254
Query: 261 AVHCKTSGVSDYFAQDELHG 280
A K + D Q+ L G
Sbjct: 255 APRLKELKLIDSIVQEPLGG 274
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYG-------TTLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
FDEF +L G +V G A++ G+PV IIG N G+ E K
Sbjct: 83 FDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 142
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+E+ + K+P++ + G G +E G ++A A+ + +S VP + ++
Sbjct: 143 ALRLMEMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLSVPVICTVIGE 202
Query: 445 GGSFGA 450
GGS GA
Sbjct: 203 GGSGGA 208
>sp|Q00955|ACAC_YEAST Acetyl-CoA carboxylase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ACC1 PE=1 SV=2
Length = 2233
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 177/481 (36%), Gaps = 135/481 (28%)
Query: 125 GRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFP- 183
GR + VAND T K G++ P + + E A + +P IYL + GA + E+ P
Sbjct: 1579 GRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEEIVPL 1638
Query: 184 -------------------------------DKENFGRIFYNQAIMSAEGIPQIALVLGS 212
DKEN + + +++ E I ++GS
Sbjct: 1639 FQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKEN--SVLTERTVINGEERFVIKTIIGS 1696
Query: 213 -------CTAG----------------------------GAYIPAMADESVMVKGNGTIF 237
C G GAY+ + ++ V+G I
Sbjct: 1697 EDGLGVECLRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQ-PII 1755
Query: 238 LAGPPLVKAATGEEISAED--LGGAAVHCKTSGVSDYFAQDELHGLSLGRNIIKNLHM-- 293
L G P + G E+ + LGG + +GVS A D+L G+ I++ +
Sbjct: 1756 LTGAPAINKMLGREVYTSNLQLGGTQI-MYNNGVSHLTAVDDLAGV---EKIVEWMSYVP 1811
Query: 294 AGRQGEINGFQNINPEYKEPLYDVKELYSIAPADLKQSFDIRSVIARIVDGSE------- 346
A R + P+ + K+ + P D + D + +++G E
Sbjct: 1812 AKRNMPV------------PILETKDTWD-RPVDFTPTNDETYDVRWMIEGRETESGFEY 1858
Query: 347 --FDE---FKKLYGTT--LVTGFAKIFGQPVGIIG------------------------- 374
FD+ F+ L G +V G A++ G P+G+IG
Sbjct: 1859 GLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQ 1918
Query: 375 NNGILFH-ESALKGAHFI-ELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAV 432
G ++H SA K A I + ++P++ L N GF G R N + K G+ +V A+
Sbjct: 1919 EPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDAL 1978
Query: 433 SCAKVPKVTII-VGGSFGAGNYAMCGRAYSPNFMFLWP--NARISVMGGAQAAGVLSQVE 489
K P + I G G++ + + + M ++ NAR V+ G+ + E
Sbjct: 1979 VDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRRE 2038
Query: 490 K 490
K
Sbjct: 2039 K 2039
>sp|A1AVG1|ACCA_RUTMC Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Ruthia magnifica subsp. Calyptogena magnifica GN=accA
PE=3 SV=1
Length = 316
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDP--------TVKGGTYFPIT 146
F E ++L G +Y + II GI + + MF+ G P
Sbjct: 78 FDEFTELHGDRIYGD---DHAIIGGIARLDAQPVMFIGQQKGRTTQEKLKYNFGMPRPEG 134
Query: 147 IKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQI 206
+K LR +++ + +P I +D+ GAY AE E + + MS P I
Sbjct: 135 YRKALRLMKLSEKFSMPIITFIDTPGAYPGIGAEERGQSEAIAKNLFE---MSTLATPII 191
Query: 207 ALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP------LVKAATGEEISAEDLGGA 260
++V+G +GGA +AD +M K +I+ P L K AT ++AE L
Sbjct: 192 SVVIGEGGSGGALAIGVADIIMMFK--YSIYSVISPEGCASILYKDATKANLAAESLKLT 249
Query: 261 AVHCKTSGVSDYFAQDELHGL 281
+ H K +G+ D + L G+
Sbjct: 250 SAHLKENGLIDIIIDEPLGGI 270
>sp|A5UA82|ACCA_HAEIE Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Haemophilus influenzae (strain PittEE) GN=accA PE=3
SV=1
Length = 315
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 20/199 (10%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDP--TVKG------GTYFPIT 146
F E +LAG + + I+ G+ + GR M + + TVK G P
Sbjct: 79 FTEFEELAGDRAFAD---DKAIVGGLARLDGRPVMVIGHQKGRTVKDKVSRNFGMPAPEG 135
Query: 147 IKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQI 206
+K LR E+A + KLP I +D+ GAY AE E R A ++ +P I
Sbjct: 136 YRKALRLMEMAERFKLPIITFIDTPGAYPGIGAEERGQAEAIARNLREMAQLT---VPVI 192
Query: 207 ALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAA 261
V+G +GGA + D+ M++ T + P L K+A +AE +G A
Sbjct: 193 CTVIGEGGSGGALAIGVGDKVNMLQ-YSTYSVISPEGCASILWKSAEKASTAAEVMGLTA 251
Query: 262 VHCKTSGVSDYFAQDELHG 280
K + D Q+ L G
Sbjct: 252 SRLKELNLIDNIVQEPLGG 270
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYG-------TTLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
F EF++L G +V G A++ G+PV +IG N G+ E K
Sbjct: 79 FTEFEELAGDRAFADDKAIVGGLARLDGRPVMVIGHQKGRTVKDKVSRNFGMPAPEGYRK 138
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+E+ + K+P++ + G G +E G A+A A+ + ++ VP + ++
Sbjct: 139 ALRLMEMAERFKLPIITFIDTPGAYPGIGAEERGQAEAIARNLREMAQLTVPVICTVIGE 198
Query: 445 GGSFGA 450
GGS GA
Sbjct: 199 GGSGGA 204
>sp|Q5HW21|ACCA_CAMJR Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Campylobacter jejuni (strain RM1221) GN=accA PE=3
SV=1
Length = 312
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 140 GTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMS 199
G P +K LR +A + ++P ++L+D+ GAY AE E R Y +S
Sbjct: 123 GMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGIGAEERGQSEAIARNLYE---LS 179
Query: 200 AEGIPQIALVLGSCTAGGAYIPAMADESVMVK----------GNGTIFLAGPPLVKAAT- 248
IP IA+V+G +GGA +AD+ VM+K G I P +AAT
Sbjct: 180 DLKIPTIAIVIGEGGSGGALAIGVADKLVMMKNSVFSVISPEGCAAILWNDPAKSEAATK 239
Query: 249 GEEISAEDL 257
+++A+DL
Sbjct: 240 AMKVTADDL 248
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 358 LVTGFAKIFGQPVGIIGNNGILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSE 417
+V G K G I N G+ E K L + +IP++FL + G G +E
Sbjct: 104 IVIGEQKGRGTKDKIARNFGMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGIGAE 163
Query: 418 ANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMG 477
G ++A A+ + +S K+P + I++G G+G G A + + + N+ SV+
Sbjct: 164 ERGQSEAIARNLYELSDLKIPTIAIVIGEG-GSGGALAIGVA---DKLVMMKNSVFSVIS 219
Query: 478 GAQAAGVL 485
A +L
Sbjct: 220 PEGCAAIL 227
>sp|A6VUT8|ACCA_MARMS Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Marinomonas sp. (strain MWYL1) GN=accA PE=3 SV=1
Length = 315
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 20/199 (10%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDP--TVKG------GTYFPIT 146
F + ++ G Y + I+ GI + GR M + + VK G P
Sbjct: 80 FTDFEEMHGDRHYAD---DRAIVGGIARLDGRPVMVIGHQKGREVKEKVLRNFGMPRPEG 136
Query: 147 IKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQI 206
+K LR E A + +P + L+D+ GAY AE E I +N A+MS P I
Sbjct: 137 YRKALRLMETAERFNMPIVTLIDTPGAYPGIGAEERGQSEA---IAFNLAVMSRLKTPII 193
Query: 207 ALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAA 261
+ V+G +GGA + DE +M++ GT + P L K+A +A+ +G A
Sbjct: 194 STVIGEGGSGGALAIGVCDELMMLQ-YGTYSVISPEGCASILWKSADRASDAAKAMGITA 252
Query: 262 VHCKTSGVSDYFAQDELHG 280
+ G D Q+ L G
Sbjct: 253 QRLQELGFVDTIIQEPLGG 271
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 22/132 (16%)
Query: 347 FDEFKKLYGT-------TLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
F +F++++G +V G A++ G+PV +IG N G+ E K
Sbjct: 80 FTDFEEMHGDRHYADDRAIVGGIARLDGRPVMVIGHQKGREVKEKVLRNFGMPRPEGYRK 139
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+E + +P+V L + G G +E G ++A A + +S K P ++ ++
Sbjct: 140 ALRLMETAERFNMPIVTLIDTPGAYPGIGAEERGQSEAIAFNLAVMSRLKTPIISTVIGE 199
Query: 445 GGSFGAGNYAMC 456
GGS GA +C
Sbjct: 200 GGSGGALAIGVC 211
>sp|B9KF15|ACCA_CAMLR Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Campylobacter lari (strain RM2100 / D67 / ATCC
BAA-1060) GN=accA PE=3 SV=1
Length = 311
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 140 GTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMS 199
G P +K LR ++A + +P ++LVD+ GAY AE E R Y +S
Sbjct: 123 GMPHPEGYRKALRVAKMAEKFNIPVLFLVDTPGAYPGVGAEERGQSEAIARNLYE---LS 179
Query: 200 AEGIPQIALVLGSCTAGGAYIPAMADESVMVK----------GNGTIFLAGPPLVKAAT- 248
A IA+V+G +GGA +AD+ M+K G I P +AAT
Sbjct: 180 ALKTITIAVVIGEGGSGGALAIGVADKLAMMKNSVFSVISPEGCAAILWNDPSKSEAATK 239
Query: 249 GEEISAEDLGGAAVHCKTSGVSDYFAQDELHGLSLGR-NIIKNL 291
+++A+DL KT G+ D ++ + G + N IKNL
Sbjct: 240 AMKVTADDL-------KTQGLIDDVIEEPMSGAHRDKENAIKNL 276
>sp|Q21LR0|ACCA_SACD2 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 /
DSM 17024) GN=accA PE=3 SV=1
Length = 318
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 116 IITGIGPVHGRLCMFVANDP--TVKGGTYF------PITIKKHLRAQEIAAQCKLPCIYL 167
II G+G + G+ M + + +VK Y P +K LR E+A + K+P + L
Sbjct: 98 IIGGVGRIDGKPVMVIGEEKGRSVKDKVYRNFGMPKPEGYRKALRLMEMAERFKMPVLTL 157
Query: 168 VDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADES 227
+D+ GAY +E E+ + N A+MS P I V+G ++GGA + D+
Sbjct: 158 IDTPGAYPGIDSEERGISESIAQ---NLAVMSRLRTPIICTVIGEGSSGGALAIGVGDQL 214
Query: 228 VMVKGNGTIFLAGPPLVKAATGEEISAEDLGGAAVHCKTSGVSDYFAQDE 277
M++ T F+ P + + L A+ +S ++D DE
Sbjct: 215 NMLQ-YSTYFVISPEGCANIIWKTVEKAPLAAEAMGVTSSVLADLGIVDE 263
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 347 FDEFKKLYGT-------TLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
F+++ +L+G ++ G +I G+PV +IG N G+ E K
Sbjct: 80 FEDWDELHGDRHFGDDKAIIGGVGRIDGKPVMVIGEEKGRSVKDKVYRNFGMPKPEGYRK 139
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGG 446
+E+ + K+P++ L + G G SE GI+++ A+ + +S + P + ++G
Sbjct: 140 ALRLMEMAERFKMPVLTLIDTPGAYPGIDSEERGISESIAQNLAVMSRLRTPIICTVIGE 199
Query: 447 SFGAGNYAM 455
G A+
Sbjct: 200 GSSGGALAI 208
>sp|Q7VPL3|ACCA_HAEDU Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724)
GN=accA PE=3 SV=1
Length = 317
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 22/216 (10%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDP------TVKG--GTYFPIT 146
F E +LAG + + I+ GI + GR M + + VK G P
Sbjct: 81 FTEFDELAGDRAFAD---DKAIVGGIARLDGRPVMVIGHQKGRVTKEKVKRNFGMPAPEG 137
Query: 147 IKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQI 206
+K LR E+A + K+P I +D+ GAY AE E R N MS +P I
Sbjct: 138 YRKALRLMEMAERFKMPIITFIDTPGAYPGIGAEERGQAEAIAR---NLREMSQLSVPII 194
Query: 207 ALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAA 261
V+G +GGA + D+ M++ T + P L K+A ++AE +G A
Sbjct: 195 CTVIGEGGSGGALAIGVGDKVNMLQ-YSTYSVISPEGCASILWKSAEKASMAAEVMGLTA 253
Query: 262 VHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQ 297
K + D + L G R+++K H +Q
Sbjct: 254 QRLKELNLIDGIVDEPLGGAH--RDVLKIAHNLKQQ 287
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYG-------TTLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
F EF +L G +V G A++ G+PV +IG N G+ E K
Sbjct: 81 FTEFDELAGDRAFADDKAIVGGIARLDGRPVMVIGHQKGRVTKEKVKRNFGMPAPEGYRK 140
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+E+ + K+P++ + G G +E G A+A A+ + +S VP + ++
Sbjct: 141 ALRLMEMAERFKMPIITFIDTPGAYPGIGAEERGQAEAIARNLREMSQLSVPIICTVIGE 200
Query: 445 GGSFGA 450
GGS GA
Sbjct: 201 GGSGGA 206
>sp|Q5P2J0|ACCA_AROAE Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Aromatoleum aromaticum (strain EbN1) GN=accA PE=3
SV=2
Length = 322
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKG-----------GTYF 143
F + +L G Y + I+ G+ +G+ C+ + + KG G
Sbjct: 80 FTDFVELHGDRTYAD---DKAIVGGLARFNGQSCVVIGHQ---KGRDTKEKILRNFGMPR 133
Query: 144 PITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGI 203
P +K LR +A + LP VD+ GAY AE E GR Y +M+ +
Sbjct: 134 PEGYRKALRLMRLAEKFGLPVFTFVDTPGAYPGIDAEERGQSEAIGRNLY---VMAELKV 190
Query: 204 PQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLG 258
P I ++G +GGA A+ D+ +M++ T + P L K+A +AE +G
Sbjct: 191 PIITTIIGEGGSGGALAIAVGDQVMMLQ-YATYSVISPEGCASILWKSAEKASEAAETMG 249
Query: 259 GAAVHCKTSGVSD 271
A K+ G+ D
Sbjct: 250 ITAARLKSLGLID 262
>sp|Q7VX94|ACCA_BORPE Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589
/ NCTC 13251) GN=accA PE=3 SV=1
Length = 321
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 20/228 (8%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVAN----DPTVKGGTYF----PIT 146
F + +L G +Y + QS I+ G+ +G CM + + D + F P
Sbjct: 80 FTDFHELHGDRMYADD-QS--IVGGLARFNGSACMVIGHQKGRDTKERAARNFGMPRPEG 136
Query: 147 IKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQI 206
+K LR +A + +LP +D+ GAY AE E GR Y A + +P I
Sbjct: 137 YRKALRLMRLAEKFRLPIFTFIDTPGAYPGIGAEERGQSEAIGRNLYAMAELK---VPVI 193
Query: 207 ALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAA 261
V+G +GGA A+ + +M++ T + P L ++A +AE L A
Sbjct: 194 CTVIGEGGSGGALAIAVGNAVLMLQ-YATYSVISPEGCASILWRSADKAPEAAEALAITA 252
Query: 262 VHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPE 309
K G+ D + + G ++ L + Q + PE
Sbjct: 253 PRLKDLGLVDRVVNEPVGGAHRDPRVMARLLRRALGDALRQLQGLGPE 300
>sp|Q7W860|ACCA_BORPA Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587
/ NCTC 13253) GN=accA PE=3 SV=1
Length = 321
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 20/228 (8%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVAN----DPTVKGGTYF----PIT 146
F + +L G +Y + QS I+ G+ +G CM + + D + F P
Sbjct: 80 FTDFHELHGDRMYADD-QS--IVGGLARFNGSACMVIGHQKGRDTKERAARNFGMPRPEG 136
Query: 147 IKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQI 206
+K LR +A + +LP +D+ GAY AE E GR Y A + +P I
Sbjct: 137 YRKALRLMRLAEKFRLPIFTFIDTPGAYPGIGAEERGQSEAIGRNLYAMAELK---VPVI 193
Query: 207 ALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAA 261
V+G +GGA A+ + +M++ T + P L ++A +AE L A
Sbjct: 194 CTVIGEGGSGGALAIAVGNAVLMLQ-YATYSVISPEGCASILWRSADKAPEAAEALAITA 252
Query: 262 VHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPE 309
K G+ D + + G ++ L + Q + PE
Sbjct: 253 PRLKDLGLVDRVVNEPVGGAHRDPRVMARLLRRALGDALRQLQGLGPE 300
>sp|Q7WLK8|ACCA_BORBR Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC
13252 / RB50) GN=accA PE=3 SV=1
Length = 321
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 20/228 (8%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVAN----DPTVKGGTYF----PIT 146
F + +L G +Y + QS I+ G+ +G CM + + D + F P
Sbjct: 80 FTDFHELHGDRMYADD-QS--IVGGLARFNGSACMVIGHQKGRDTKERAARNFGMPRPEG 136
Query: 147 IKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQI 206
+K LR +A + +LP +D+ GAY AE E GR Y A + +P I
Sbjct: 137 YRKALRLMRLAEKFRLPIFTFIDTPGAYPGIGAEERGQSEAIGRNLYAMAELK---VPVI 193
Query: 207 ALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAA 261
V+G +GGA A+ + +M++ T + P L ++A +AE L A
Sbjct: 194 CTVIGEGGSGGALAIAVGNAVLMLQ-YATYSVISPEGCASILWRSADKAPEAAEALAITA 252
Query: 262 VHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPE 309
K G+ D + + G ++ L + Q + PE
Sbjct: 253 PRLKDLGLVDRVVNEPVGGAHRDPRVMARLLRRALGDALRQLQGLGPE 300
>sp|P43872|ACCA_HAEIN Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=accA PE=3 SV=1
Length = 315
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 20/199 (10%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDP--TVKG------GTYFPIT 146
F E +LAG + + I+ G+ + GR M + + +VK G P
Sbjct: 79 FTEFEELAGDRAFAD---DKAIVGGLARLDGRPVMVIGHQKGRSVKEKVQRNFGMPAPEG 135
Query: 147 IKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQI 206
+K LR E+A + KLP I +D+ GAY AE E R A ++ +P I
Sbjct: 136 YRKALRLMEMAERFKLPIITFIDTPGAYPGIGAEERGQAEAIARNLREMAQLT---VPVI 192
Query: 207 ALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAA 261
V+G +GGA + D+ M++ T + P L K+A +AE +G A
Sbjct: 193 CTVIGEGGSGGALAIGVGDKVNMLQ-YSTYSVISPEGCASILWKSAEKASTAAEVMGLTA 251
Query: 262 VHCKTSGVSDYFAQDELHG 280
K + D Q+ L G
Sbjct: 252 SRLKELNLIDSIVQEPLGG 270
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYG-------TTLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
F EF++L G +V G A++ G+PV +IG N G+ E K
Sbjct: 79 FTEFEELAGDRAFADDKAIVGGLARLDGRPVMVIGHQKGRSVKEKVQRNFGMPAPEGYRK 138
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+E+ + K+P++ + G G +E G A+A A+ + ++ VP + ++
Sbjct: 139 ALRLMEMAERFKLPIITFIDTPGAYPGIGAEERGQAEAIARNLREMAQLTVPVICTVIGE 198
Query: 445 GGSFGA 450
GGS GA
Sbjct: 199 GGSGGA 204
>sp|Q5H1F6|ACCA_XANOR Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Xanthomonas oryzae pv. oryzae (strain KACC10331 /
KXO85) GN=accA PE=3 SV=1
Length = 319
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 97 ELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVAN----DPTVKGGTYF----PITIK 148
E +LAG Y + I+ G+G + GR + + + D K F P +
Sbjct: 82 EFQELAGDRAYAD---DKAIVGGLGRIDGRPVVIIGHQKGRDTKTKVARNFGMPRPEGYR 138
Query: 149 KHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIAL 208
K LR ++A + +LP + +D+ GAY AE E R N M+ IP I
Sbjct: 139 KALRLMKLAERFRLPLLTFIDTPGAYPGIGAEERGQSEAIAR---NLLEMAELKIPVICT 195
Query: 209 VLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAAVH 263
V+G +GGA + D ++M++ GT + P L K A + +AE LG A
Sbjct: 196 VIGEGGSGGALAIGVGDRTLMLE-YGTYSVISPEGCASILWKDAGKAKDAAEQLGLTARR 254
Query: 264 CKTSGVSD 271
K + D
Sbjct: 255 LKDLSLVD 262
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 348 DEFKKLYG-------TTLVTGFAKIFGQPVGIIG-------------NNGILFHESALKG 387
DEF++L G +V G +I G+PV IIG N G+ E K
Sbjct: 81 DEFQELAGDRAYADDKAIVGGLGRIDGRPVVIIGHQKGRDTKTKVARNFGMPRPEGYRKA 140
Query: 388 AHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV--G 445
++L + ++PL+ + G G +E G ++A A+ ++ ++ K+P + ++ G
Sbjct: 141 LRLMKLAERFRLPLLTFIDTPGAYPGIGAEERGQSEAIARNLLEMAELKIPVICTVIGEG 200
Query: 446 GSFGA 450
GS GA
Sbjct: 201 GSGGA 205
>sp|B2SR15|ACCA_XANOP Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=accA
PE=3 SV=1
Length = 319
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 97 ELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVAN----DPTVKGGTYF----PITIK 148
E +LAG Y + I+ G+G + GR + + + D K F P +
Sbjct: 82 EFQELAGDRAYAD---DKAIVGGLGRIDGRPVVIIGHQKGRDTKTKVARNFGMPRPEGYR 138
Query: 149 KHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIAL 208
K LR ++A + +LP + +D+ GAY AE E R N M+ IP I
Sbjct: 139 KALRLMKLAERFRLPLLTFIDTPGAYPGIGAEERGQSEAIAR---NLLEMAELKIPVICT 195
Query: 209 VLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAAVH 263
V+G +GGA + D ++M++ GT + P L K A + +AE LG A
Sbjct: 196 VIGEGGSGGALAIGVGDRTLMLE-YGTYSVISPEGCASILWKDAGKAKDAAEQLGLTARR 254
Query: 264 CKTSGVSD 271
K + D
Sbjct: 255 LKDLSLVD 262
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 348 DEFKKLYG-------TTLVTGFAKIFGQPVGIIG-------------NNGILFHESALKG 387
DEF++L G +V G +I G+PV IIG N G+ E K
Sbjct: 81 DEFQELAGDRAYADDKAIVGGLGRIDGRPVVIIGHQKGRDTKTKVARNFGMPRPEGYRKA 140
Query: 388 AHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV--G 445
++L + ++PL+ + G G +E G ++A A+ ++ ++ K+P + ++ G
Sbjct: 141 LRLMKLAERFRLPLLTFIDTPGAYPGIGAEERGQSEAIARNLLEMAELKIPVICTVIGEG 200
Query: 446 GSFGA 450
GS GA
Sbjct: 201 GSGGA 205
>sp|Q2P4C1|ACCA_XANOM Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018)
GN=accA PE=3 SV=1
Length = 319
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 97 ELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVAN----DPTVKGGTYF----PITIK 148
E +LAG Y + I+ G+G + GR + + + D K F P +
Sbjct: 82 EFQELAGDRAYAD---DKAIVGGLGRIDGRPVVIIGHQKGRDTKTKVARNFGMPRPEGYR 138
Query: 149 KHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQIAL 208
K LR ++A + +LP + +D+ GAY AE E R N M+ IP I
Sbjct: 139 KALRLMKLAERFRLPLLTFIDTPGAYPGIGAEERGQSEAIAR---NLLEMAELKIPVICT 195
Query: 209 VLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAAVH 263
V+G +GGA + D ++M++ GT + P L K A + +AE LG A
Sbjct: 196 VIGEGGSGGALAIGVGDRTLMLE-YGTYSVISPEGCASILWKDAGKAKDAAEQLGLTARR 254
Query: 264 CKTSGVSD 271
K + D
Sbjct: 255 LKDLSLVD 262
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 348 DEFKKLYG-------TTLVTGFAKIFGQPVGIIG-------------NNGILFHESALKG 387
DEF++L G +V G +I G+PV IIG N G+ E K
Sbjct: 81 DEFQELAGDRAYADDKAIVGGLGRIDGRPVVIIGHQKGRDTKTKVARNFGMPRPEGYRKA 140
Query: 388 AHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV--G 445
++L + ++PL+ + G G +E G ++A A+ ++ ++ K+P + ++ G
Sbjct: 141 LRLMKLAERFRLPLLTFIDTPGAYPGIGAEERGQSEAIARNLLEMAELKIPVICTVIGEG 200
Query: 446 GSFGA 450
GS GA
Sbjct: 201 GSGGA 205
>sp|A8ALA3|ACCA_CITK8 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83
/ SGSC4696) GN=accA PE=3 SV=1
Length = 319
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 94 SFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKG--------GTYFPI 145
+F E +LAG Y + I+ GI + GR M + + + G P
Sbjct: 82 AFDEFDELAGDRAYAD---DKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPE 138
Query: 146 TIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQ 205
+K LR E+A + +P I +D+ GAY AE E R N MS +P
Sbjct: 139 GYRKALRLMEMAERFNMPIITFIDTPGAYPGVGAEERGQSEAIAR---NLREMSRLSVPV 195
Query: 206 IALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGA 260
I V+G +GGA + D+ M++ T + P L K+A ++AE +G
Sbjct: 196 ICTVIGEGGSGGALAIGVGDKVNMLQ-YSTYSVISPEGCASILWKSADKAPLAAEAMGII 254
Query: 261 AVHCKTSGVSDYFAQDELHG 280
A K + D Q+ L G
Sbjct: 255 APRLKELKLIDSIIQEPLGG 274
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYGT-------TLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
FDEF +L G +V G A++ G+PV IIG N G+ E K
Sbjct: 83 FDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 142
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+E+ + +P++ + G G +E G ++A A+ + +S VP + ++
Sbjct: 143 ALRLMEMAERFNMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLSVPVICTVIGE 202
Query: 445 GGSFGA 450
GGS GA
Sbjct: 203 GGSGGA 208
>sp|Q4QND7|ACCA_HAEI8 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Haemophilus influenzae (strain 86-028NP) GN=accA PE=3
SV=1
Length = 315
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 20/199 (10%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDP--TVKG------GTYFPIT 146
F E +LAG + + I+ G+ + GR M + + +VK G P
Sbjct: 79 FTEFEELAGDRAFAD---DKAIVGGLARLDGRPVMVIGHQKGRSVKEKVQRNFGMPAPEG 135
Query: 147 IKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQI 206
+K LR E+A + KLP I +D+ GAY AE E R A ++ +P I
Sbjct: 136 YRKALRLMEMAERFKLPIITFIDTPGAYPGIGAEERGQAEAIARNLREMAQLT---VPVI 192
Query: 207 ALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAA 261
V+G +GGA + D+ M++ T + P L K+A +AE +G A
Sbjct: 193 CTVIGEGGSGGALAIGVGDKVNMLQ-YSTYSVISPEGCASILWKSAEKASTAAEVMGLTA 251
Query: 262 VHCKTSGVSDYFAQDELHG 280
K + D Q+ L G
Sbjct: 252 SRLKELNLIDSIMQEPLGG 270
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYG-------TTLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
F EF++L G +V G A++ G+PV +IG N G+ E K
Sbjct: 79 FTEFEELAGDRAFADDKAIVGGLARLDGRPVMVIGHQKGRSVKEKVQRNFGMPAPEGYRK 138
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+E+ + K+P++ + G G +E G A+A A+ + ++ VP + ++
Sbjct: 139 ALRLMEMAERFKLPIITFIDTPGAYPGIGAEERGQAEAIARNLREMAQLTVPVICTVIGE 198
Query: 445 GGSFGA 450
GGS GA
Sbjct: 199 GGSGGA 204
>sp|Q2KX40|ACCA_BORA1 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Bordetella avium (strain 197N) GN=accA PE=3 SV=1
Length = 321
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 20/228 (8%)
Query: 95 FLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVAN----DPTVKGGTYF----PIT 146
F + +L G +Y + I+ G+ +G+ CM + + D + F P
Sbjct: 80 FTDFHELHGDRMYAD---DQSIVGGLARFNGQSCMVIGHQKGRDTKERAARNFGMPRPEG 136
Query: 147 IKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQI 206
+K R +A + KLP VD+ GAY AE E G Y +M+ +P I
Sbjct: 137 YRKAQRLMRLAEKFKLPIFTFVDTPGAYPGIGAEERGQSEAIGHNLY---VMAELKVPVI 193
Query: 207 ALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGAA 261
++G +GGA A+ + +M++ T + P L ++A +AE L A
Sbjct: 194 VTIIGEGGSGGALAIAVGNAVLMLQ-YSTYSVISPEGCASILWRSADKAPEAAEALAITA 252
Query: 262 VHCKTSGVSDYFAQDELHGLSLGRNIIKNLHMAGRQGEINGFQNINPE 309
K G+ D + + G ++ L + Q++ PE
Sbjct: 253 PRLKDLGLIDRVVNEPIGGAHRDPRVMARLLRRALGDSLRQLQDLTPE 300
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYG-------TTLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
F +F +L+G ++V G A+ GQ +IG N G+ E K
Sbjct: 80 FTDFHELHGDRMYADDQSIVGGLARFNGQSCMVIGHQKGRDTKERAARNFGMPRPEGYRK 139
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+ L + K+P+ + G G +E G ++A + ++ KVP + I+
Sbjct: 140 AQRLMRLAEKFKLPIFTFVDTPGAYPGIGAEERGQSEAIGHNLYVMAELKVPVIVTIIGE 199
Query: 445 GGSFGA 450
GGS GA
Sbjct: 200 GGSGGA 205
>sp|P0ABD7|ACCA_SHIFL Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Shigella flexneri GN=accA PE=3 SV=2
Length = 319
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 94 SFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKG--------GTYFPI 145
+F E +LAG Y + I+ GI + GR M + + + G P
Sbjct: 82 AFDEFDELAGDRAYAD---DKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPE 138
Query: 146 TIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQ 205
+K LR ++A + K+P I +D+ GAY AE E R N MS G+P
Sbjct: 139 GYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIAR---NLREMSRLGVPV 195
Query: 206 IALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGA 260
+ V+G +GGA + D+ M++ T + P L K+A ++AE +G
Sbjct: 196 VCTVIGEGGSGGALAIGVGDKVNMLQ-YSTYSVISPEGCASILWKSADKAPLAAEAMGII 254
Query: 261 AVHCKTSGVSDYFAQDELHG 280
A K + D + L G
Sbjct: 255 APRLKELKLIDSIIPEPLGG 274
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYGT-------TLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
FDEF +L G +V G A++ G+PV IIG N G+ E K
Sbjct: 83 FDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 142
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+++ + K+P++ + G G +E G ++A A+ + +S VP V ++
Sbjct: 143 ALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGE 202
Query: 445 GGSFGA 450
GGS GA
Sbjct: 203 GGSGGA 208
>sp|Q0T824|ACCA_SHIF8 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Shigella flexneri serotype 5b (strain 8401) GN=accA
PE=3 SV=1
Length = 319
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 94 SFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKG--------GTYFPI 145
+F E +LAG Y + I+ GI + GR M + + + G P
Sbjct: 82 AFDEFDELAGDRAYAD---DKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPE 138
Query: 146 TIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQ 205
+K LR ++A + K+P I +D+ GAY AE E R N MS G+P
Sbjct: 139 GYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIAR---NLREMSRLGVPV 195
Query: 206 IALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGA 260
+ V+G +GGA + D+ M++ T + P L K+A ++AE +G
Sbjct: 196 VCTVIGEGGSGGALAIGVGDKVNMLQ-YSTYSVISPEGCASILWKSADKAPLAAEAMGII 254
Query: 261 AVHCKTSGVSDYFAQDELHG 280
A K + D + L G
Sbjct: 255 APRLKELKLIDSIIPEPLGG 274
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYGT-------TLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
FDEF +L G +V G A++ G+PV IIG N G+ E K
Sbjct: 83 FDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 142
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+++ + K+P++ + G G +E G ++A A+ + +S VP V ++
Sbjct: 143 ALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGE 202
Query: 445 GGSFGA 450
GGS GA
Sbjct: 203 GGSGGA 208
>sp|Q32JS4|ACCA_SHIDS Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=accA PE=3 SV=1
Length = 319
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 94 SFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKG--------GTYFPI 145
+F E +LAG Y + I+ GI + GR M + + + G P
Sbjct: 82 AFDEFDELAGDRAYAD---DKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPE 138
Query: 146 TIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQ 205
+K LR ++A + K+P I +D+ GAY AE E R N MS G+P
Sbjct: 139 GYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIAR---NLREMSRLGVPV 195
Query: 206 IALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGA 260
+ V+G +GGA + D+ M++ T + P L K+A ++AE +G
Sbjct: 196 VCTVIGEGGSGGALAIGVGDKVNMLQ-YSTYSVISPEGCASILWKSADKAPLAAEAMGII 254
Query: 261 AVHCKTSGVSDYFAQDELHG 280
A K + D + L G
Sbjct: 255 APRLKELKLIDSIIPEPLGG 274
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYGT-------TLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
FDEF +L G +V G A++ G+PV IIG N G+ E K
Sbjct: 83 FDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 142
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+++ + K+P++ + G G +E G ++A A+ + +S VP V ++
Sbjct: 143 ALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGE 202
Query: 445 GGSFGA 450
GGS GA
Sbjct: 203 GGSGGA 208
>sp|B6HZF9|ACCA_ECOSE Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Escherichia coli (strain SE11) GN=accA PE=3 SV=1
Length = 319
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 94 SFLELSQLAGHELYEETLQSGGIITGIGPVHGRLCMFVANDPTVKG--------GTYFPI 145
+F E +LAG Y + I+ GI + GR M + + + G P
Sbjct: 82 AFDEFDELAGDRAYAD---DKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPE 138
Query: 146 TIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFYNQAIMSAEGIPQ 205
+K LR ++A + K+P I +D+ GAY AE E R N MS G+P
Sbjct: 139 GYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIAR---NLREMSRLGVPV 195
Query: 206 IALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP-----LVKAATGEEISAEDLGGA 260
+ V+G +GGA + D+ M++ T + P L K+A ++AE +G
Sbjct: 196 VCTVIGEGGSGGALAIGVGDKVNMLQ-YSTYSVISPEGCASILWKSADKAPLAAEAMGII 254
Query: 261 AVHCKTSGVSDYFAQDELHG 280
A K + D + L G
Sbjct: 255 APRLKELKLIDSIIPEPLGG 274
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 347 FDEFKKLYGT-------TLVTGFAKIFGQPVGIIG-------------NNGILFHESALK 386
FDEF +L G +V G A++ G+PV IIG N G+ E K
Sbjct: 83 FDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 142
Query: 387 GAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIV-- 444
+++ + K+P++ + G G +E G ++A A+ + +S VP V ++
Sbjct: 143 ALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGE 202
Query: 445 GGSFGA 450
GGS GA
Sbjct: 203 GGSGGA 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,764,096
Number of Sequences: 539616
Number of extensions: 9253903
Number of successful extensions: 27699
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 579
Number of HSP's that attempted gapping in prelim test: 26560
Number of HSP's gapped (non-prelim): 1139
length of query: 566
length of database: 191,569,459
effective HSP length: 123
effective length of query: 443
effective length of database: 125,196,691
effective search space: 55462134113
effective search space used: 55462134113
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)