Query 048392
Match_columns 515
No_of_seqs 263 out of 2281
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 15:44:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048392.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048392hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 2.7E-89 9.3E-94 724.8 52.3 503 3-509 3-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 4.4E-86 1.5E-90 699.0 50.9 487 6-507 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 1.5E-80 5.1E-85 662.8 47.2 489 4-510 8-499 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 2.6E-75 9.1E-80 615.6 43.1 456 6-507 2-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 7.6E-73 2.6E-77 599.3 43.1 452 20-506 7-501 (501)
6 2ipi_A Aclacinomycin oxidoredu 100.0 8.1E-68 2.8E-72 565.3 47.5 450 22-507 29-520 (521)
7 2wdx_A Putative hexose oxidase 100.0 3.8E-68 1.3E-72 567.7 44.2 457 8-506 24-523 (523)
8 1zr6_A Glucooligosaccharide ox 100.0 5.4E-68 1.9E-72 564.8 42.2 460 3-509 5-481 (503)
9 2y3s_A TAML; oxidoreductase; H 100.0 1.9E-67 6.6E-72 562.5 45.0 451 22-507 33-528 (530)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 4.7E-65 1.6E-69 537.8 38.8 437 21-506 12-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 1.7E-40 5.8E-45 356.4 35.0 193 45-244 60-263 (534)
12 3pm9_A Putative oxidoreductase 100.0 1.2E-36 4.2E-41 320.4 20.9 202 45-252 43-253 (476)
13 2exr_A Cytokinin dehydrogenase 100.0 1.7E-34 5.7E-39 308.4 37.5 198 45-249 53-261 (524)
14 4bby_A Alkyldihydroxyacetoneph 100.0 8.4E-35 2.9E-39 318.7 22.8 204 46-250 198-408 (658)
15 1wvf_A 4-cresol dehydrogenase 100.0 1.8E-32 6.2E-37 293.1 33.4 199 50-254 53-268 (520)
16 4feh_A Oxidoreductase DPRE1; a 100.0 1.2E-31 4E-36 282.6 37.9 178 45-230 35-218 (481)
17 2vfr_A Xylitol oxidase, aldito 100.0 2.1E-30 7E-35 270.5 31.8 175 45-232 12-189 (422)
18 2uuu_A Alkyldihydroxyacetoneph 100.0 9.8E-32 3.3E-36 289.3 22.0 199 50-251 134-339 (584)
19 1e8g_A Vanillyl-alcohol oxidas 100.0 5.1E-29 1.7E-33 268.3 25.4 200 50-254 67-300 (560)
20 2i0k_A Oxidoreductase; MIX alp 100.0 1.4E-29 5E-34 272.2 18.5 200 22-232 9-227 (561)
21 3js8_A Cholesterol oxidase; ch 100.0 4.9E-29 1.7E-33 262.5 19.1 190 29-229 11-220 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 1.1E-28 3.9E-33 263.7 16.4 197 50-251 42-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 5.6E-26 1.9E-30 226.5 13.5 164 50-228 51-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 1.4E-25 4.8E-30 225.8 12.8 166 49-228 26-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 8.9E-25 3E-29 219.3 13.3 162 50-226 45-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 4.6E-24 1.6E-28 214.3 16.4 165 50-228 11-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 5E-23 1.7E-27 199.6 8.2 152 52-227 21-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 3E-19 1E-23 168.2 11.3 116 113-236 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.2 2.3E-06 7.9E-11 83.8 9.1 154 53-226 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.6 8.5E-05 2.9E-09 72.6 6.9 154 53-225 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.4 7.5E-05 2.6E-09 77.6 3.5 151 56-225 179-345 (462)
32 3nvz_B Xanthine dehydrogenase/ 96.5 0.004 1.4E-07 61.2 7.0 154 53-224 9-189 (305)
33 1t3q_C Quinoline 2-oxidoreduct 96.3 0.0058 2E-07 59.5 6.8 152 53-224 4-174 (288)
34 3hrd_C Nicotinate dehydrogenas 92.9 0.19 6.6E-06 48.8 7.3 75 54-135 3-82 (296)
35 4bby_A Alkyldihydroxyacetoneph 87.5 0.99 3.4E-05 48.9 7.6 30 472-501 625-655 (658)
36 1rm6_B 4-hydroxybenzoyl-COA re 87.3 0.62 2.1E-05 45.7 5.3 76 53-136 5-84 (324)
37 3unc_A Xanthine dehydrogenase/ 72.6 3.2 0.00011 48.5 5.3 78 53-138 232-313 (1332)
38 1e8g_A Vanillyl-alcohol oxidas 66.8 11 0.00038 39.8 7.6 26 480-505 523-548 (560)
39 1f0x_A DLDH, D-lactate dehydro 57.5 5.3 0.00018 42.3 3.0 32 478-510 535-566 (571)
40 2uuu_A Alkyldihydroxyacetoneph 56.1 12 0.00042 39.6 5.6 30 472-501 551-581 (584)
41 2i0k_A Oxidoreductase; MIX alp 47.1 7.3 0.00025 41.2 2.0 23 480-502 533-555 (561)
42 3zyv_A AOH1; oxidoreductase, m 39.2 16 0.00053 42.9 3.3 78 55-139 241-321 (1335)
43 1wn2_A Peptidyl-tRNA hydrolase 37.7 52 0.0018 26.9 5.4 38 51-88 53-91 (121)
44 3js8_A Cholesterol oxidase; ch 37.4 11 0.00038 39.5 1.5 23 479-501 511-533 (540)
45 1xty_A PTH, peptidyl-tRNA hydr 35.7 58 0.002 26.5 5.4 42 45-88 48-90 (120)
46 1rzw_A Protein AF2095(GR4); be 34.9 58 0.002 26.7 5.2 38 51-88 46-84 (123)
47 1rlk_A Hypothetical protein TA 33.9 55 0.0019 26.5 4.9 39 50-88 48-87 (117)
48 2zv3_A PTH, peptidyl-tRNA hydr 32.8 54 0.0018 26.5 4.7 38 51-88 47-85 (115)
49 1q7s_A BIT1, protein CGI-147; 27.6 83 0.0028 25.4 5.0 37 51-87 49-86 (117)
50 2p5m_A Arginine repressor; alp 27.0 46 0.0016 25.1 3.1 72 4-75 7-81 (83)
51 2g2c_A Putative molybdenum cof 22.5 1.4E+02 0.0049 25.5 5.9 41 55-95 47-87 (167)
52 2kxh_B Peptide of FAR upstream 21.5 42 0.0014 20.1 1.4 20 477-496 9-28 (31)
53 2zfz_A Arginine repressor; DNA 21.3 47 0.0016 24.8 2.1 71 5-75 4-77 (79)
54 1mkz_A Molybdenum cofactor bio 20.3 1.7E+02 0.0059 25.1 6.0 40 55-94 46-86 (172)
55 2crl_A Copper chaperone for su 20.2 1.5E+02 0.0053 22.4 5.1 32 112-143 48-79 (98)
56 2kng_A Protein LSR2; DNA-bindi 20.0 29 0.00099 24.1 0.6 22 63-84 12-33 (55)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=2.7e-89 Score=724.78 Aligned_cols=503 Identities=53% Similarity=0.978 Sum_probs=429.4
Q ss_pred chhHHHHHHhhCCCCCCcccceEecCCCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEE
Q 048392 3 DAHKFVQCLLENSEDSTSISKLIYTRTNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRV 82 (515)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~ 82 (515)
-.++|.+||+....+.+.+.+.|++|+++.|++++.++.+|.||+......|.+||+|++++||+++|++|+++++||+|
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 35789999999777778899999999999999998888999999998889999999999999999999999999999999
Q ss_pred EcCCCCCCCCCcccCCCCCEEEEEcCCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHHhCCcceecCCCCCcccchhhhhC
Q 048392 83 RSGGHDYEGLSYVSNYHVPFVIIDFINLSSVSVDPEAKTAWVQAGATNGKVYHTIAEKSKTLAFPAGVCPTVGVGGLFSG 162 (515)
Q Consensus 83 ~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~g 162 (515)
||||||+.+.+...+ .++++|||++||+|++|++..+++||||+++.+|+++|.++|++|.+++|.|+++||||+++|
T Consensus 83 rggGh~~~g~~~~~~--~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~g 160 (518)
T 3vte_A 83 RSGGHDAEGMSYISQ--VPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSG 160 (518)
T ss_dssp ESSCCCTTCTTTCCS--SSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHT
T ss_pred ECCCcCCCCCccCCC--CCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCC
Confidence 999999988774322 248999999999999999999999999999999999999998889999999999999999999
Q ss_pred CCCCCcccccccccceEeEEEEEecCCcEEecCCCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecch-h
Q 048392 163 GGYGFLMRKYGLAADNVVDAHLIDVNGRLLDRKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTLE-Q 241 (515)
Q Consensus 163 gg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~-~ 241 (515)
||+|+++++||+++|+|++++||++||++++.+.+++|||||+|||++|+|||||+++|||+|.|+.+..|.+.+... +
T Consensus 161 Gg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~ 240 (518)
T 3vte_A 161 GGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIH 240 (518)
T ss_dssp CCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHH
T ss_pred CCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHH
Confidence 999999999999999999999999999999754468999999999855899999999999999999888888877654 5
Q ss_pred HHHHHHHHHHHHHhhccccceEEEEEEeccCC---CCCCceeEEEEEEEEeCCccchhhhhhhhCCCCCCccccceecCH
Q 048392 242 NATKIVDRWQHVADNLDEDLYIRVFLRSANSS---TQGKKTIRASFESLFLGGADVLLPLMQHSFPELGLVKEDCIEMSW 318 (515)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 318 (515)
++.+++.+|+++.+.+|++++..+.+...++. ..+...+.+.+.++|+|+.+++.+.|.+.|++++....++.+++|
T Consensus 241 ~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w 320 (518)
T 3vte_A 241 GLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSW 320 (518)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECH
T ss_pred HHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecch
Confidence 67889999999999999999998887653211 011122456788999999999988888777777766677899999
Q ss_pred HHHHHHHhccCC--Cc---hhhhccCCCCCCcceeeeccCccCCCCHHHHHHHHHHHHhcCCceeEEEEEecCCccCCCC
Q 048392 319 IESIMYFAGFRG--QS---LDVLLNRTQPNVRFFKAKSDFVYDPMPEIAFQGIYERFYEKEAEAAEMILSPYGGVMNQIS 393 (515)
Q Consensus 319 ~~~~~~~~~~~~--~~---~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~GGai~~v~ 393 (515)
.+.+.++++++. .+ ++.+.++......+||.||+|+.+++++++++.+++.+.+.+...+.++++++||++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~ 400 (518)
T 3vte_A 321 IDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEIS 400 (518)
T ss_dssp HHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSC
T ss_pred hhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCC
Confidence 998888765431 23 4455555444456788999999989999999999998876443358899999999999999
Q ss_pred CCCCCCcccCCCeEEEEEEEEeCCCChhhhHHHHHHHHHHHHhhccccCCCCCceecccCCCccC-CCCCCCcchhhhhh
Q 048392 394 DSATPFPHRAGTRYKIQHIVYWEEEGSEASQRHISWIRRLYDYVAPYVSKNPRAAYLNYRDLDIG-TNNKGYTSYKQASI 472 (515)
Q Consensus 394 ~~~tAf~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNYad~~~~-~~~~~~~~~~~~~~ 472 (515)
.++|||+||++.+|.+++.+.|.++ +.++++.+|++++++.|.|+.+..+.++|+||+|.+++ .+..++++++.++.
T Consensus 401 ~~~TAf~hR~~~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~ 478 (518)
T 3vte_A 401 ESAIPFPHRAGIMYELWYTASWEKQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARI 478 (518)
T ss_dssp TTSSSCCCCTTCCEEEEEEEEECCT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHH
T ss_pred CCCCcccccCcceEEEEEEEecCCc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhh
Confidence 9999999998558999999999765 45678999999999999998654557899999998876 32234566777789
Q ss_pred hHhhhhcccHHHHHHhhhccCCCCCcccCCCCCCCCc
Q 048392 473 WGLKYFKNNFKRLVDVKTMVDPGNFFRNEQSIPPLSS 509 (515)
Q Consensus 473 ~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~~~~ 509 (515)
|+++|||+||+||++||+||||+|||+++|||+|..+
T Consensus 479 w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 479 WGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 9999999999999999999999999999999998754
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=4.4e-86 Score=698.95 Aligned_cols=487 Identities=44% Similarity=0.817 Sum_probs=418.4
Q ss_pred HHHHHHhhCCCCCCcccceEecCCCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcC
Q 048392 6 KFVQCLLENSEDSTSISKLIYTRTNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSG 85 (515)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~ 85 (515)
+|.+||.....+. ++.|++|+|+.|++++.++.+|.||+......|.+||+|+|++||+++|++|+++++||+||||
T Consensus 1 ~~~~cl~~~~~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 1 DLLSCLTFNGVRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp CHHHHHHHTTCCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred ChhHHHhhcCCCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 3789999866532 7899999999999998888999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCEEEEEcCCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHHhCCcceecCCCCCcccchhhhhCCCC
Q 048392 86 GHDYEGLSYVSNYHVPFVIIDFINLSSVSVDPEAKTAWVQAGATNGKVYHTIAEKSKTLAFPAGVCPTVGVGGLFSGGGY 165 (515)
Q Consensus 86 Gh~~~~~~~~~~~~~~gvvIdl~~l~~v~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~ 165 (515)
|||+.+.+...+ +++++|||++|++|++|+++.+++||||+++.+|+++|.++++||.+++|.|+++||||+++|||+
T Consensus 78 Gh~~~g~~~~~~--~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~ 155 (495)
T 3fw9_A 78 GHSYEGLSYTSD--TPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGF 155 (495)
T ss_dssp CCCTTCTTSCCS--SCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCC
T ss_pred CcCCCCccccCC--CCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCC
Confidence 999988876543 258999999999999999999999999999999999999997788999999999999999999999
Q ss_pred CCcccccccccceEeEEEEEecCCcEEecCCCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecch-hHHH
Q 048392 166 GFLMRKYGLAADNVVDAHLIDVNGRLLDRKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTLE-QNAT 244 (515)
Q Consensus 166 g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~-~~~~ 244 (515)
|+++++||+++|+|++++||++||++++++.+++||||++|||++|+|||||+++|||+|.|+.+..+.+.++.+ +++.
T Consensus 156 G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~ 235 (495)
T 3fw9_A 156 GMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEAT 235 (495)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHH
T ss_pred cccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHH
Confidence 999999999999999999999999999854568999999999666899999999999999999888888777653 5678
Q ss_pred HHHHHHHHHHhhccccceEEEEEEeccCCCCCCceeEEEEEEEEeCCccchhhhhhhhCCCCCCccccceecCHHHHHHH
Q 048392 245 KIVDRWQHVADNLDEDLYIRVFLRSANSSTQGKKTIRASFESLFLGGADVLLPLMQHSFPELGLVKEDCIEMSWIESIMY 324 (515)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (515)
+++.+|++++..+|++++..+.... . .....+.+.++|+|+.+++.+.|.+.|+.++....++.+++|.+.+.+
T Consensus 236 ~~l~~~~~~~~~~~~~l~~~~~~~~--~----~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~ 309 (495)
T 3fw9_A 236 SLLHKWQFVAEELEEDFTLSVLGGA--D----EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAY 309 (495)
T ss_dssp HHHHHHHHHHHHSCTTEEEEEEEEE--E----TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHH
T ss_pred HHHHHHHHHHhcCChhHeEEEEEcC--C----CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHH
Confidence 8999999999999999988776432 1 112356788999999998888888777777766677899999998777
Q ss_pred HhccCCCchhhhccCCCC-CCcceeeeccCccCCCCHHHHHHHHHHHHhcCCceeEEEEEecCCccCCCCCCCCCCcccC
Q 048392 325 FAGFRGQSLDVLLNRTQP-NVRFFKAKSDFVYDPMPEIAFQGIYERFYEKEAEAAEMILSPYGGVMNQISDSATPFPHRA 403 (515)
Q Consensus 325 ~~~~~~~~~~~~~~r~~~-~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~GGai~~v~~~~tAf~~Rd 403 (515)
+++.+. ++.+.++... .+.+|+.||+|+.+++++++++.+++.+.+.+. ..++++++||++++++.++|||+||+
T Consensus 310 ~~~~~~--~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~--~~~~~~~~GGa~~~v~~~~TAf~hR~ 385 (495)
T 3fw9_A 310 LAGLET--VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPN--GFIALNGFGGQMSKISSDFTPFPHRS 385 (495)
T ss_dssp HTTCSC--GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTT--EEEEEEECCGGGGTSCTTTSSCCCCT
T ss_pred Hhcccc--hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCC--cEEEecccCCccccCCCCCCCccccC
Confidence 764331 2334444332 346788999999999999999999999887653 67999999999999999999999998
Q ss_pred CCeEEEEEEEEeCCCChhhhHHHHHHHHHHHHhhccccCCCCCceecccCCCccCCCCC-----CCcchhhhhhhHhhhh
Q 048392 404 GTRYKIQHIVYWEEEGSEASQRHISWIRRLYDYVAPYVSKNPRAAYLNYRDLDIGTNNK-----GYTSYKQASIWGLKYF 478 (515)
Q Consensus 404 ~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNYad~~~~~~~~-----~~~~~~~~~~~~~~yy 478 (515)
+.+|.+++.+.|.+++.+.++++.+|++++++.+.|+.+..+.++|+||+|.+++.++. ++++++.++.|+++||
T Consensus 386 ~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yy 465 (495)
T 3fw9_A 386 GTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYF 465 (495)
T ss_dssp TCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHH
T ss_pred ccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHh
Confidence 56899999999975433456789999999999999996545568999999988752111 1245556678999999
Q ss_pred cccHHHHHHhhhccCCCCCcccCCCCCCC
Q 048392 479 KNNFKRLVDVKTMVDPGNFFRNEQSIPPL 507 (515)
Q Consensus 479 G~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 507 (515)
|+||+||++||++|||+|||+++|||+|.
T Consensus 466 g~n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 466 LSNYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp GGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HhHHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 99999999999999999999999999984
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1.5e-80 Score=662.83 Aligned_cols=489 Identities=47% Similarity=0.899 Sum_probs=406.2
Q ss_pred hhHHHHHHhhCCCCCCcccceEecCCCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEE
Q 048392 4 AHKFVQCLLENSEDSTSISKLIYTRTNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVR 83 (515)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~ 83 (515)
.+++.+||.+.+. ...|++|+++.|..++.++.+|.||+.....+|.+||+|+|++||+++|++|+++++||+||
T Consensus 8 ~~~f~~~L~~~~~-----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r 82 (500)
T 3tsh_A 8 KEDFLGCLVKEIP-----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVR 82 (500)
T ss_dssp -CHHHHHHHHHSC-----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhhCC-----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEE
Confidence 4678999988663 46789999999999999999999999988999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccCCCCCEEEEEcCCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHHhCCcceecCCCCCcccchhhhhCC
Q 048392 84 SGGHDYEGLSYVSNYHVPFVIIDFINLSSVSVDPEAKTAWVQAGATNGKVYHTIAEKSKTLAFPAGVCPTVGVGGLFSGG 163 (515)
Q Consensus 84 g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~gg 163 (515)
||||++.|.+.+....+++++|||++||+|++|++.++++||||+++++|+++|.++|+++.+++|.|++|||||+++||
T Consensus 83 ~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~g 162 (500)
T 3tsh_A 83 SGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGG 162 (500)
T ss_dssp SSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTC
T ss_pred cCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccc
Confidence 99999988765432123599999999999999999999999999999999999999988888999999999999999999
Q ss_pred CCCCcccccccccceEeEEEEEecCCcEEecCCCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecchhHH
Q 048392 164 GYGFLMRKYGLAADNVVDAHLIDVNGRLLDRKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTLEQNA 243 (515)
Q Consensus 164 g~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~ 243 (515)
|+|.++++||+++|+|+++|||++||++++.+.+++||||++|||++|+|||||+++||++|.|+.+..+...+...+.+
T Consensus 163 g~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~ 242 (500)
T 3tsh_A 163 GFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGA 242 (500)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTH
T ss_pred cCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHH
Confidence 99999999999999999999999999999866678999999998887899999999999999999888777777666667
Q ss_pred HHHHHHHHHHHhhccccceEEEEEEeccCCCCCCceeEEEEEEEEeCCccchhhhhhhhCCCCCCccccceecCHHHHHH
Q 048392 244 TKIVDRWQHVADNLDEDLYIRVFLRSANSSTQGKKTIRASFESLFLGGADVLLPLMQHSFPELGLVKEDCIEMSWIESIM 323 (515)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 323 (515)
.+++.+|+.+.+.+|+++...+.... ....+..+|+|+.+++...+...+..++.....+..++|.+...
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 312 (500)
T 3tsh_A 243 VDIINKWQVVAPQLPADLMIRIIAQG----------PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIP 312 (500)
T ss_dssp HHHHHHHHHHGGGSCTTEEEEEEESS----------SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHH
T ss_pred HHHHHHHHHhhhccChhhEEEEEecC----------CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccch
Confidence 88999999999999998877665421 13456788999988877777766766766666777888888665
Q ss_pred HHhccC-CCchhhhccCCCCCCcceeeeccCccCCCCHHHHHHHHHHHHhcCCceeEEEEEecCCccCCCCCCCCCCccc
Q 048392 324 YFAGFR-GQSLDVLLNRTQPNVRFFKAKSDFVYDPMPEIAFQGIYERFYEKEAEAAEMILSPYGGVMNQISDSATPFPHR 402 (515)
Q Consensus 324 ~~~~~~-~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~GGai~~v~~~~tAf~~R 402 (515)
+..... ......+.++......+.+.++.++.++++++.++.+++.+...+. ...++++++||+++++++++|+|+||
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gga~~~~~~~ata~~~R 391 (500)
T 3tsh_A 313 FVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPG-AGIMIFDPYGATISATPESATPFPHR 391 (500)
T ss_dssp HHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTT-CCEEEEEECCHHHHHSCTTSSSCCCC
T ss_pred hhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCC-ceEEEEcccCccccCCCCccCcCccc
Confidence 543222 1111222333333344556677778788888888888776655443 35677899999999999999999999
Q ss_pred CCCeEEEEEEEEeCCCChhhhHHHHHHHHHHHHhhccccCCCCCceecccCCCccCCCCCC--CcchhhhhhhHhhhhcc
Q 048392 403 AGTRYKIQHIVYWEEEGSEASQRHISWIRRLYDYVAPYVSKNPRAAYLNYRDLDIGTNNKG--YTSYKQASIWGLKYFKN 480 (515)
Q Consensus 403 d~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNYad~~~~~~~~~--~~~~~~~~~~~~~yyG~ 480 (515)
++.+|.+++...|.++ +.++...+|++++++.+.++.+..+.++|+||+|.+++..+.. ...+...++|+++|||+
T Consensus 392 ~~~l~~i~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~ 469 (500)
T 3tsh_A 392 KGVLFNIQYVNYWFAP--GAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKG 469 (500)
T ss_dssp TTCCEEEEEEEEECST--TCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGG
T ss_pred CCcEEEEEEEEecCCc--chhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhH
Confidence 9777889999999877 4557889999999999999876566789999999987632210 11334456899999999
Q ss_pred cHHHHHHhhhccCCCCCcccCCCCCCCCcc
Q 048392 481 NFKRLVDVKTMVDPGNFFRNEQSIPPLSSR 510 (515)
Q Consensus 481 n~~RL~~IK~kyDP~nvF~~~qsI~~~~~~ 510 (515)
||+||++||+||||+|||+++|||+|..|+
T Consensus 470 Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~~ 499 (500)
T 3tsh_A 470 NFERLAITKGKVDPTDYFRNEQSIPPLIKK 499 (500)
T ss_dssp GHHHHHHHHHHHCTTCCSCCTTSCCCCCC-
T ss_pred HHHHHHHHHHHhCcccccCCCCCCCCCCCC
Confidence 999999999999999999999999998775
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=2.6e-75 Score=615.61 Aligned_cols=456 Identities=24% Similarity=0.448 Sum_probs=369.6
Q ss_pred HHHHHHhhCCCCCCcccceEecCCCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcC
Q 048392 6 KFVQCLLENSEDSTSISKLIYTRTNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSG 85 (515)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~ 85 (515)
+|.+||+..... |++|+|+.|++++. +|+......|.+||+|+|++||+++|++|+++++||++|||
T Consensus 2 ~l~~cl~~~~~~-------v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 68 (473)
T 3rja_A 2 AIEACLSAAGVP-------IDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSG 68 (473)
T ss_dssp HHHHHHHHTTCC-------BCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred hHHHHHHhCCCc-------EECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 689999997653 89999999998843 45555567999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCEEEEEcCCCCcEE-EcCCCCEEEEcCCCCHHHHHHHHHHhCCcceecCCCCCcccchhhhhCCC
Q 048392 86 GHDYEGLSYVSNYHVPFVIIDFINLSSVS-VDPEAKTAWVQAGATNGKVYHTIAEKSKTLAFPAGVCPTVGVGGLFSGGG 164 (515)
Q Consensus 86 Gh~~~~~~~~~~~~~~gvvIdl~~l~~v~-~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg 164 (515)
|||+.+.+.... +++++|||++||+|. +|++..+++||||+++.+|+++|.++| ++.++.|.|+++||||+++|||
T Consensus 69 Gh~~~g~~~~~~--~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg 145 (473)
T 3rja_A 69 GHSYASFGFGGE--NGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGG 145 (473)
T ss_dssp CCCTTCGGGTSS--SSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCC
T ss_pred CCCCCCCcccCC--CCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCC
Confidence 999986543322 248999999999996 999999999999999999999999995 3788999999999999999999
Q ss_pred CCCcccccccccceEeEEEEEecCCcEEe-cCCCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecch--h
Q 048392 165 YGFLMRKYGLAADNVVDAHLIDVNGRLLD-RKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTLE--Q 241 (515)
Q Consensus 165 ~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~--~ 241 (515)
+|+.+++||+++|+|++++||++||++++ +..+++||||++|||+ |+|||||+++|||+|.|+.+..+.+.+... +
T Consensus 146 ~G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~ 224 (473)
T 3rja_A 146 FGFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKT 224 (473)
T ss_dssp CCTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHH
T ss_pred CCcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHH
Confidence 99999999999999999999999999997 5667899999999997 899999999999999998887887777664 3
Q ss_pred HHHHHHHHHHHHHh-hccccceEEEEEEeccCCCCCCceeEEEEEEEEeCCccchhhhhhhhCCCCC-Cccccce-ecCH
Q 048392 242 NATKIVDRWQHVAD-NLDEDLYIRVFLRSANSSTQGKKTIRASFESLFLGGADVLLPLMQHSFPELG-LVKEDCI-EMSW 318 (515)
Q Consensus 242 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~-~~~~~~~-~~~~ 318 (515)
.+.+++++|+++.. ++|++++..+.+. ++ + .+.+.++|+|+.+++.++|++++...+ +...++. +++|
T Consensus 225 ~~~~~~~~~~~~~~~~~p~~l~~~~~~~--~~---~----~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~ 295 (473)
T 3rja_A 225 SALKGIEAVEDYARWVAPREVNFRIGDY--GA---G----NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNW 295 (473)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEEEEEEES--SS---S----CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECH
T ss_pred HHHHHHHHHHHHhhhCCChhHEEEEEEc--CC---C----cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCH
Confidence 46789999999988 8999998877764 11 1 146778999999988888876543333 3445677 8999
Q ss_pred HHHHHHHhccCCCchhhhccCCCCCCcceeeeccCccCCCCHHHHHHHHHHHHhcC-C---ceeEEEEEecCC---ccCC
Q 048392 319 IESIMYFAGFRGQSLDVLLNRTQPNVRFFKAKSDFVYDPMPEIAFQGIYERFYEKE-A---EAAEMILSPYGG---VMNQ 391 (515)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~-~---~~~~i~~~~~GG---ai~~ 391 (515)
.+...+++... .++.... .....++.++.+. +++++++++.+++.+.+.. . ..+.++++++|| ++++
T Consensus 296 ~~~~~~~~~~~--~~~~~~~---~~~~~~~~ks~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~ 369 (473)
T 3rja_A 296 IESVLSYSNFD--HVDFITP---QPVENFYAKSLTL-KSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTK 369 (473)
T ss_dssp HHHHHHTSSSS--CCCCSSC---CCCBEEEEEEEEE-SCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGG
T ss_pred HHHHHhhhcCC--CcccccC---CCCCcceEecccc-CCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcC
Confidence 99776654211 1111100 0023466777775 4799999999999886532 2 245688999998 6778
Q ss_pred CCCCCCCCcccCCCeEEEEEEEEeCC-CChhhhHHHHHHHHHHHHhhccccCCCCCceecccCCCccCCCCCCCcchhhh
Q 048392 392 ISDSATPFPHRAGTRYKIQHIVYWEE-EGSEASQRHISWIRRLYDYVAPYVSKNPRAAYLNYRDLDIGTNNKGYTSYKQA 470 (515)
Q Consensus 392 v~~~~tAf~~Rd~~~~~~~~~~~W~~-~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNYad~~~~~~~~~~~~~~~~ 470 (515)
++.++|||+||+ ..|.+++.+.|.+ + +.+++..+|++++++.+.+.......++|+||+|.++. .
T Consensus 370 v~~~~TAf~hR~-~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~ 435 (473)
T 3rja_A 370 VTNAETAYPHRD-KLWLIQFYDRYDNNQ--TYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------R 435 (473)
T ss_dssp SCTTTSSCCCTT-CSEEEEEEEEECTTS--CCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------H
T ss_pred CCCCCCccccCC-ccEEEEEEEEeCCCC--ccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------c
Confidence 888999999999 6899999999953 3 22345677877777666544322235799999998864 1
Q ss_pred hhhHhhhhcccHHHHHHhhhccCCCCCcccCCCCCCC
Q 048392 471 SIWGLKYFKNNFKRLVDVKTMVDPGNFFRNEQSIPPL 507 (515)
Q Consensus 471 ~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 507 (515)
.+|++.|||+||+||++||+||||+|+|+++|||+|.
T Consensus 436 ~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 436 DYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred hhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCC
Confidence 3799999999999999999999999999999999975
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=7.6e-73 Score=599.27 Aligned_cols=452 Identities=23% Similarity=0.382 Sum_probs=353.9
Q ss_pred cccceEecCCCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCC
Q 048392 20 SISKLIYTRTNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYH 99 (515)
Q Consensus 20 ~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~ 99 (515)
++.+.|++|+|+.|++++. .+|.|| ...|.+||+|++++||+++|++|+++++||+|||||||+.+.+...+
T Consensus 7 s~~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~-- 78 (501)
T 3pop_A 7 SVPPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR-- 78 (501)
T ss_dssp --CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC--
T ss_pred cCCCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC--
Confidence 4678899999999999863 446665 46999999999999999999999999999999999999998776543
Q ss_pred CCEEEEEcCCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHH-hCCcceecCCCCCcccchhhhhCCCCCCcccccccccce
Q 048392 100 VPFVIIDFINLSSVSVDPEAKTAWVQAGATNGKVYHTIAE-KSKTLAFPAGVCPTVGVGGLFSGGGYGFLMRKYGLAADN 178 (515)
Q Consensus 100 ~~gvvIdl~~l~~v~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~ 178 (515)
++++|||++||+|++|++..+++||||+++.+|+++|.+ + |+.++.|.|++|||||+++|||+|+++++||+++|+
T Consensus 79 -~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~--Gl~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~ 155 (501)
T 3pop_A 79 -RDLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRW--NAALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDH 155 (501)
T ss_dssp -CSEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHH--SBCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGG
T ss_pred -CEEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhc--CeEeCCCCCCCceEeeccccCCCcccccccccHHHh
Confidence 489999999999999999999999999999999999975 5 578899999999999999999999999999999999
Q ss_pred EeEEEEEe--cCCc--EEec----CCCCcchhhhhhcccCCceeEEEEEEEEE----------EeeC-ceEEEEEEeecc
Q 048392 179 VVDAHLID--VNGR--LLDR----KSMGEDLFWAIRGGGGASFGVIIAWKIKL----------VTVP-EIVTAFTVNRTL 239 (515)
Q Consensus 179 v~~~~vv~--~~G~--~~~~----~~~~~dL~~a~rg~~~g~~Givt~~~~~l----------~~~~-~~~~~~~~~~~~ 239 (515)
|+++|||+ +||+ +++. +.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|+.
T Consensus 156 v~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~ 235 (501)
T 3pop_A 156 LHAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPW 235 (501)
T ss_dssp EEEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEG
T ss_pred EEEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEch
Confidence 99999999 8999 4432 35689999999998668999999999998 6654 456666666653
Q ss_pred h----hHHHHHHHHHHHHHh--hcccc----ceEEEEEEeccCCCCCCceeEEEEEEEEeCCccchhhhhhhhCCC----
Q 048392 240 E----QNATKIVDRWQHVAD--NLDED----LYIRVFLRSANSSTQGKKTIRASFESLFLGGADVLLPLMQHSFPE---- 305 (515)
Q Consensus 240 ~----~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~---- 305 (515)
. +.+.++++.|+++.. ..|++ ++..+.+... ..+ .+.+..++.|+.+++.+++++++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~g~~~~~~~~l~~~~~~~~~~ 308 (501)
T 3pop_A 236 AMIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV---SSG----VLQLMVQQDADVDPEGEILARFVASLTEG 308 (501)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG---GGC----EEEEEEEEETTTCTTCHHHHHHHHHHHTT
T ss_pred hhcCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC---CCC----eEEEEEEEeCChHHHHHHHHHHHHhhhhc
Confidence 2 234677888888765 34544 2333333211 111 2445667788887766666554321
Q ss_pred --CCCccccceecCHHHHHHHHhccCCCchhhhccCCCCCCcceeeeccCccCCCCHHHHHHHHHHHHhc-CCceeEEEE
Q 048392 306 --LGLVKEDCIEMSWIESIMYFAGFRGQSLDVLLNRTQPNVRFFKAKSDFVYDPMPEIAFQGIYERFYEK-EAEAAEMIL 382 (515)
Q Consensus 306 --l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~-~~~~~~i~~ 382 (515)
+.+... +.+++|.+...... .+... .. ...+++.++.|+.++++++.++.+++.+... +.+.+.+++
T Consensus 309 ~g~~p~~~-~~~~~~~~~~~~~~-~~~~~-~~-------~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~ 378 (501)
T 3pop_A 309 TGVVGIPR-GGVMSWLTGTRYMS-QADCG-DV-------MGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMF 378 (501)
T ss_dssp SSCCCEEE-EEEEEHHHHHHHTC-BCSCG-GG-------TTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEE
T ss_pred cCCCccce-eEEeCHHHHHhhhc-CCCCC-cc-------cccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 222333 77889988654431 11000 00 0134677888888889999999999988763 334578999
Q ss_pred EecCCccCCCCCCCCCCcccCCCeEEEEEEEEeCCCChhhhHHHHHHHHHHHHhhccccC------CCCCceecccCCCc
Q 048392 383 SPYGGVMNQISDSATPFPHRAGTRYKIQHIVYWEEEGSEASQRHISWIRRLYDYVAPYVS------KNPRAAYLNYRDLD 456 (515)
Q Consensus 383 ~~~GGai~~v~~~~tAf~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~------~~~~g~YvNYad~~ 456 (515)
+++||++++++.++|||+||+ ..|++++.+.|.++ +.++++.+|++++++.+.++.+ ....++|+||+|.+
T Consensus 379 ~~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~d 455 (501)
T 3pop_A 379 NSYGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDAD 455 (501)
T ss_dssp EECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGG
T ss_pred EecCcccccCCCCCCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCcc
Confidence 999999999999999999999 68999999999866 4567899999999999876532 12468999999998
Q ss_pred cCCCCCCCcchhhhhhhHhhhhcccHHHHHHhhhccCCCCCcccCCCCCC
Q 048392 457 IGTNNKGYTSYKQASIWGLKYFKNNFKRLVDVKTMVDPGNFFRNEQSIPP 506 (515)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~ 506 (515)
++..+ ++++ +..|++.|||+||+||++||+||||+|||+++|||+|
T Consensus 456 l~~~~-~~~~---~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 456 LLDPA-RNRS---GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp GGCTT-TCCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ccccc-cccc---cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 76321 1121 3359999999999999999999999999999999986
No 6
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=8.1e-68 Score=565.33 Aligned_cols=450 Identities=26% Similarity=0.431 Sum_probs=343.8
Q ss_pred cceEecCCCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCCC
Q 048392 22 SKLIYTRTNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHVP 101 (515)
Q Consensus 22 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~~ 101 (515)
...|++|+|+.|++++ ...||.||. ..|.+||+|++++||+++|++|+++++||.|||||||+.+.+.... +
T Consensus 29 ~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~~---~ 100 (521)
T 2ipi_A 29 ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDPA---V 100 (521)
T ss_dssp CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCTT---C
T ss_pred CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCC---C
Confidence 3459999999999986 235577774 4899999999999999999999999999999999999988665432 3
Q ss_pred EEEEEcCCCCcEEEcCCCCEEEEcCCCCHHHHHHHHH-HhCCcceecCCCCCcccchhhhhCCCCCCcccccccccceEe
Q 048392 102 FVIIDFINLSSVSVDPEAKTAWVQAGATNGKVYHTIA-EKSKTLAFPAGVCPTVGVGGLFSGGGYGFLMRKYGLAADNVV 180 (515)
Q Consensus 102 gvvIdl~~l~~v~~d~~~~~v~v~aG~~~~~l~~~l~-~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~ 180 (515)
+++|||++||+|++|++..+|+||||++|.+|+++|. ++ |+.+++|.|+++||||+++|||+|+++++||+++|+|+
T Consensus 101 gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~--Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~ 178 (521)
T 2ipi_A 101 RAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDW--GVTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLY 178 (521)
T ss_dssp CEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHH--SBCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEE
T ss_pred eEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhc--CceeCCCCCCCcccCCcccCCCCCccccccccHhhcEE
Confidence 8999999999999999999999999999999999997 67 57889999999999999999999999999999999999
Q ss_pred EEEEEecC--CcEEe---cCC-CCc--chhhhhhcccCCceeEEEEEEEEE-----------EeeCc-eEEEEEEeecch
Q 048392 181 DAHLIDVN--GRLLD---RKS-MGE--DLFWAIRGGGGASFGVIIAWKIKL-----------VTVPE-IVTAFTVNRTLE 240 (515)
Q Consensus 181 ~~~vv~~~--G~~~~---~~~-~~~--dL~~a~rg~~~g~~Givt~~~~~l-----------~~~~~-~~~~~~~~~~~~ 240 (515)
++|||++| |+++. ... +++ |||||+|||++|+|||||+++||+ +|.|+ .+..+.+.|+..
T Consensus 179 ~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 258 (521)
T 2ipi_A 179 AVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDWS 258 (521)
T ss_dssp EEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEEST
T ss_pred EEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEeccc
Confidence 99999977 98742 222 445 599999997668999999999999 98875 455555655431
Q ss_pred ----hHHHHHHHHHHHHHhh--cccc----ceEEEEEEeccCCCCCCceeEEEEEEEEeCCccchhhhhhhhCC---C-C
Q 048392 241 ----QNATKIVDRWQHVADN--LDED----LYIRVFLRSANSSTQGKKTIRASFESLFLGGADVLLPLMQHSFP---E-L 306 (515)
Q Consensus 241 ----~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~---~-l 306 (515)
+.+.+++++|+++... .|++ +...+.+.. . ..+ .+.+...|.|+.++..+++++++. . +
T Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~--~-~~~----~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~ 331 (521)
T 2ipi_A 259 ALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNS--R-AAG----QILLDIQIDGGLDGAEALLNDFVAAVNEGT 331 (521)
T ss_dssp TCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEEC--T-TSC----EEEEEEEEETTSTTHHHHHHHHHHHHTTTC
T ss_pred ccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEecc--C-CCC----ceEEEEEeccCHHHHHHHHHHHHHHHHhhc
Confidence 2346788888887654 4544 333333321 1 111 234456788887766666554221 1 2
Q ss_pred C-CccccceecCHHHHHHHHhccCCCchhhhccCCCCCCcceeeeccCccCCCCHHHHHHHHHHHHhcCCceeEEEEEec
Q 048392 307 G-LVKEDCIEMSWIESIMYFAGFRGQSLDVLLNRTQPNVRFFKAKSDFVYDPMPEIAFQGIYERFYEKEAEAAEMILSPY 385 (515)
Q Consensus 307 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~ 385 (515)
+ +....+..++|.+........ ... ...++.++.++.++++.+.+..+++.+.+.+...+.+.++++
T Consensus 332 g~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 399 (521)
T 2ipi_A 332 GVEPAVQRSTEPWLRATLANKFD-----------TGG-FDRTKSKGAYLRKPWTAAQAATLYRHLSADSQVWGEVSLYSY 399 (521)
T ss_dssp SSCCEEEEEEECHHHHHTCCCCC-----------CTT-CCEEEEEEEEESSCCCHHHHHHHHHHHHSCCSSEEEEEEEEC
T ss_pred CCCccceeeecCHHHHHHhhcCC-----------CCC-CccceeeccccccCCCHHHHHHHHHHHHhCCCCceEEEEEec
Confidence 2 223445667887743221100 000 013445666776678889999999998876545678899999
Q ss_pred CCccCCCCCCCCCCcccCCCeEEEEEEEEeCCCChhhhHHHHHHHHHHHHhhccccC------CCCCceecccCCCccCC
Q 048392 386 GGVMNQISDSATPFPHRAGTRYKIQHIVYWEEEGSEASQRHISWIRRLYDYVAPYVS------KNPRAAYLNYRDLDIGT 459 (515)
Q Consensus 386 GGai~~v~~~~tAf~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~------~~~~g~YvNYad~~~~~ 459 (515)
||++++++.++|||+||+ +.+.+++.+.|.++ +.++...+|++++++.+..... ....++|+||+|.+++.
T Consensus 400 GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~ 476 (521)
T 2ipi_A 400 GGKVNSVPETATATAQRD-SIIKVWMSATWMDP--AHDDANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVDLVD 476 (521)
T ss_dssp CGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGC
T ss_pred CCcccCCCCccccccccc-hhhhcceeEecCCC--CchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCccccc
Confidence 999999988999999999 68999999999876 4567889999999998873211 11357999999998652
Q ss_pred CCCCCcchhhhhhhHhhhhcccHHHHHHhhhccCCCCCcccCCCCCCC
Q 048392 460 NNKGYTSYKQASIWGLKYFKNNFKRLVDVKTMVDPGNFFRNEQSIPPL 507 (515)
Q Consensus 460 ~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 507 (515)
.+ .+++ ...|++.|||+||+||++||+||||+|||+++|||+|+
T Consensus 477 ~~-~~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 477 ER-WNTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp TT-TSCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cc-cccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 11 0111 12499999999999999999999999999999999986
No 7
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=3.8e-68 Score=567.68 Aligned_cols=457 Identities=26% Similarity=0.437 Sum_probs=344.3
Q ss_pred HHHHhhCCCCCCcccceEecCCCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCC
Q 048392 8 VQCLLENSEDSTSISKLIYTRTNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGH 87 (515)
Q Consensus 8 ~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh 87 (515)
.+||... ...|++|+|+.|++++ ...||.||. ..|.+||+|++++||+++|++|+++++||.||||||
T Consensus 24 ~~~l~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 91 (523)
T 2wdx_A 24 ERCLPPA-------GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGH 91 (523)
T ss_dssp --CCCCC-------CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred hhhcccC-------CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 3666553 3569999999999986 235678885 489999999999999999999999999999999999
Q ss_pred CCCCCCcccCCCCCEEEEEcCCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHH-hCCcceecCCCCCcccchhhhhCCCCC
Q 048392 88 DYEGLSYVSNYHVPFVIIDFINLSSVSVDPEAKTAWVQAGATNGKVYHTIAE-KSKTLAFPAGVCPTVGVGGLFSGGGYG 166 (515)
Q Consensus 88 ~~~~~~~~~~~~~~gvvIdl~~l~~v~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g 166 (515)
|+.+.+...+ ++++|||++||+|++|++..+|+||||+++.+|+++|.+ + |+.+++|.|++|||||+++|||+|
T Consensus 92 ~~~g~~~~~~---~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~--Gl~~~~G~~~~vgvgG~~~gGg~g 166 (523)
T 2wdx_A 92 CFEDFVDNPD---VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGW--NVTIPGGVCGGVGVGGHICGGGYG 166 (523)
T ss_dssp CSSSSSSSTT---CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHH--SCCCCCCCCTTCBHHHHHHHTCCC
T ss_pred CCCCCccCCC---CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhc--CeEEccCCCCCCeeCccccCCCCC
Confidence 9988776542 389999999999999999999999999999999999985 7 567889999999999999999999
Q ss_pred CcccccccccceEeEEEEEecC--CcEEe---cCC-CCcc--hhhhhhcccCCceeEEEEEEEEE-----------EeeC
Q 048392 167 FLMRKYGLAADNVVDAHLIDVN--GRLLD---RKS-MGED--LFWAIRGGGGASFGVIIAWKIKL-----------VTVP 227 (515)
Q Consensus 167 ~~~~~~G~~~d~v~~~~vv~~~--G~~~~---~~~-~~~d--L~~a~rg~~~g~~Givt~~~~~l-----------~~~~ 227 (515)
+++++||+++|+|+++|||++| |+++. +.. +++| ||||+|||++|+|||||+++||+ +|.|
T Consensus 167 ~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~ 246 (523)
T 2wdx_A 167 PLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKP 246 (523)
T ss_dssp TTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCC
T ss_pred cccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCC
Confidence 9999999999999999999955 99753 322 4555 99999987668999999999999 9987
Q ss_pred c-eEEEEEEeecch----hHHHHHHHHHHHHHhh--cccc----ceEEEEEEeccCCCCCCceeEEEEEEEEeCCccchh
Q 048392 228 E-IVTAFTVNRTLE----QNATKIVDRWQHVADN--LDED----LYIRVFLRSANSSTQGKKTIRASFESLFLGGADVLL 296 (515)
Q Consensus 228 ~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 296 (515)
+ .+..+.+.|+.. +...+++++|+++... .|++ +...+.+.. . ..+...+.+.+..+|.|+.++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~-~~g~~~~~~~~~~~~~g~~~~~~ 323 (523)
T 2wdx_A 247 PATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGN--E-VPGMGESGFMMPIQVDATRPDAR 323 (523)
T ss_dssp CSEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEEC--C-CTTCTTCSEEEEEEEETTSTTHH
T ss_pred cccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEecc--C-CCCCcceeEEEEEEEeCCHHHHH
Confidence 6 456666777542 2346788888887654 4555 223222221 1 11211123455677888877666
Q ss_pred hhhhhhCC---C-CC-CccccceecCHHHHHHHHhccCCCchhhhccCCCCCCcceeeeccCccCCCCHHHHHHHHHHHH
Q 048392 297 PLMQHSFP---E-LG-LVKEDCIEMSWIESIMYFAGFRGQSLDVLLNRTQPNVRFFKAKSDFVYDPMPEIAFQGIYERFY 371 (515)
Q Consensus 297 ~~l~~~~~---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~ 371 (515)
+.+++++. . ++ +....+..++|.+... . ... ....++.++.|+.+.++.+.+..+++.+.
T Consensus 324 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 388 (523)
T 2wdx_A 324 RLLDAHIEAVIDGVPPAEVPEPIEQRWLASTP-----------G-RGG---RGPASKTKAGYLRKRLTDRQIQAVYENMT 388 (523)
T ss_dssp HHHHHHHHHHHTTCTTCBCCCCEEEETTSSCC-----------C-CCS---SCCEEEEEEEEESSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhcCCCccccceeccHHHHHH-----------h-hcC---CCCceeeecccccCCCCHHHHHHHHHHHH
Confidence 66654221 1 22 2223334455543100 0 000 01134556777766788888999999886
Q ss_pred hcC-CceeEEEEEecCCccCCCCCCCCCCcccCCCeEEEEEEEEeCCCChhhhHHHHHHHHHHHHhhc------cccCCC
Q 048392 372 EKE-AEAAEMILSPYGGVMNQISDSATPFPHRAGTRYKIQHIVYWEEEGSEASQRHISWIRRLYDYVA------PYVSKN 444 (515)
Q Consensus 372 ~~~-~~~~~i~~~~~GGai~~v~~~~tAf~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~------~~~~~~ 444 (515)
... ...+.+.++++||++++++.++|||+||+ .+|++++.+.|.++ +.++.+.+|++++++.+. |+.+..
T Consensus 389 ~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~ 465 (523)
T 2wdx_A 389 HMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP--GNEAKHLTWVRKLYADVYAETGGVPVPNDV 465 (523)
T ss_dssp CCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG--GGHHHHHHHHHHHHHHHTGGGTTSCCSCSS
T ss_pred hcCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHhhhcCCCccCCC
Confidence 532 24577889999999999999999999999 68999999999876 456788999999998887 321111
Q ss_pred CCceecccCCCccCCCCCCCcchhhhhhhHhhhhcccHHHHHHhhhccCCCCCcccCCCCCC
Q 048392 445 PRAAYLNYRDLDIGTNNKGYTSYKQASIWGLKYFKNNFKRLVDVKTMVDPGNFFRNEQSIPP 506 (515)
Q Consensus 445 ~~g~YvNYad~~~~~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~ 506 (515)
..++|+||+|.+++..+ ++++. ..|++.|||+||+||++||+||||+|||+++|||+|
T Consensus 466 ~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 466 SDGAYINYPDSDLADPG-LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp BCCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred CCcceecCCcccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 35799999999875211 12221 149999999999999999999999999999999986
No 8
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=5.4e-68 Score=564.80 Aligned_cols=460 Identities=22% Similarity=0.415 Sum_probs=356.3
Q ss_pred chhHHHHHHhhCCCCCCcccceEecCCCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEE
Q 048392 3 DAHKFVQCLLENSEDSTSISKLIYTRTNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRV 82 (515)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~ 82 (515)
..++|++||++..+ .+++|+++.|.... .+|+......|.+||+|+|++||+++|++|+++++||.|
T Consensus 5 ~~~~l~~~l~~~~~-------~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v 71 (503)
T 1zr6_A 5 EFNSINACLAAADV-------EFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISA 71 (503)
T ss_dssp TTCHHHHHHHHTTC-------EECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhhCcCCc-------eecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEE
Confidence 45789999997432 47889999998863 246655567999999999999999999999999999999
Q ss_pred EcCCCCCCCCCcccCCCCCEEEEEcCCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHHhCCcceecCCCCCcccchhhhhC
Q 048392 83 RSGGHDYEGLSYVSNYHVPFVIIDFINLSSVSVDPEAKTAWVQAGATNGKVYHTIAEKSKTLAFPAGVCPTVGVGGLFSG 162 (515)
Q Consensus 83 ~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~g 162 (515)
||||||+.+.+.+.. +++++|||++||+|++| +.++|+||||+++.+|+++|.+++ ++.+|.|.|+.+||||+++|
T Consensus 72 ~ggGh~~~~~~~~~~--~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~g 147 (503)
T 1zr6_A 72 KGGGHSYGSYGFGGE--DGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLG 147 (503)
T ss_dssp ESSCCCTTCTTTTSS--SSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHH
T ss_pred ECCCcCCCCCcccCC--CCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcC
Confidence 999999987655311 24899999999999999 888999999999999999998875 68889999999999999999
Q ss_pred CCCCCcccccccccceEeEEEEEecCCcEEe-cCCCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecc-h
Q 048392 163 GGYGFLMRKYGLAADNVVDAHLIDVNGRLLD-RKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTL-E 240 (515)
Q Consensus 163 gg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~-~ 240 (515)
||+|+++++||+++|+|++++||++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+....+.+.+.. .
T Consensus 148 Gg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~ 226 (503)
T 1zr6_A 148 GGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNR 226 (503)
T ss_dssp CCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCH
T ss_pred CCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCH
Confidence 9999999999999999999999999999997 5567899999999998 69999999999999999877666666654 3
Q ss_pred hHHHHHHHHHHHHHhh-ccccceEEEEEEeccCCCCCCceeEEEEEEEEeCCccchhhhhhhhCCCCCC--ccccceecC
Q 048392 241 QNATKIVDRWQHVADN-LDEDLYIRVFLRSANSSTQGKKTIRASFESLFLGGADVLLPLMQHSFPELGL--VKEDCIEMS 317 (515)
Q Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~--~~~~~~~~~ 317 (515)
+.+.+++++|+++... +|+++...+.+.. . .+.+..+|+|+.++..+.+++++..++. ....+..++
T Consensus 227 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~------~----~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~ 296 (503)
T 1zr6_A 227 KQHVAGLKALQDWAQNTMPRELSMRLEINA------N----ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETD 296 (503)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTBCCEEEEET------T----EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhhcCChhHEEEEEEeC------C----eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCC
Confidence 4467788999988876 8888877766542 1 3456678999988877777654332333 123455677
Q ss_pred HHHHHHHHhccCCCchhhhccCCCCCCcceeeeccCccCCCCHHHHHHHHHHHH-hcCC---ceeEEEEEecCC---ccC
Q 048392 318 WIESIMYFAGFRGQSLDVLLNRTQPNVRFFKAKSDFVYDPMPEIAFQGIYERFY-EKEA---EAAEMILSPYGG---VMN 390 (515)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~-~~~~---~~~~i~~~~~GG---ai~ 390 (515)
|.+....+.. ...... ......+..++.++.+..+ ++++.++.+++.+. .... ..+.+.++++|| +++
T Consensus 297 ~~~~~~~~~~--~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~ 371 (503)
T 1zr6_A 297 WYGQINTYLY--GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALA 371 (503)
T ss_dssp HHHHHTTSCT--TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGG
T ss_pred HHHHHHHHcC--CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhc
Confidence 8764322211 000000 0011112345566777766 88889999999887 5332 235688999999 888
Q ss_pred CCCCCCCCCcccCCCeEEEEEEEEe-----CCCChhhhHHHHHHHHHHHHhhccccCCCCCceecccCCCccCCCCCCCc
Q 048392 391 QISDSATPFPHRAGTRYKIQHIVYW-----EEEGSEASQRHISWIRRLYDYVAPYVSKNPRAAYLNYRDLDIGTNNKGYT 465 (515)
Q Consensus 391 ~v~~~~tAf~~Rd~~~~~~~~~~~W-----~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNYad~~~~~~~~~~~ 465 (515)
+++.++++|+||+ ++|++++...| .++ +.++...+|++++.+.+.........++|+||+|.+++
T Consensus 372 ~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~------- 441 (503)
T 1zr6_A 372 AVSNDETAYAHRD-QLWLWQFYDSIYDYENNTS--PYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT------- 441 (503)
T ss_dssp GSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCT--TTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-------
T ss_pred CCCcccCCccccc-ceeEEEEEeeeccccCCCc--cchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-------
Confidence 8888999999998 68888886776 232 22345567777776665544211123799999998754
Q ss_pred chhhhhhhHhhhhcccHHHHHHhhhccCCCCCcccCCCCCCCCc
Q 048392 466 SYKQASIWGLKYFKNNFKRLVDVKTMVDPGNFFRNEQSIPPLSS 509 (515)
Q Consensus 466 ~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~~~~ 509 (515)
..+|++.|||+||+||++||+||||+|||+++|+|++..-
T Consensus 442 ----~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~w 481 (503)
T 1zr6_A 442 ----KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAY 481 (503)
T ss_dssp ----HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCCC
T ss_pred ----cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchhh
Confidence 1379999999999999999999999999999999988643
No 9
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=1.9e-67 Score=562.55 Aligned_cols=451 Identities=27% Similarity=0.417 Sum_probs=342.7
Q ss_pred cceEecCCCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCCC
Q 048392 22 SKLIYTRTNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHVP 101 (515)
Q Consensus 22 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~~ 101 (515)
...|++|+|+.|++++. .||.||. ..|.+||+|++++||+++|++|+++++||+|||||||+.+.+.... +
T Consensus 33 ~~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~---~ 103 (530)
T 2y3s_A 33 HIDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD---V 103 (530)
T ss_dssp -CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT---C
T ss_pred CceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC---C
Confidence 45789999999999864 4577774 5899999999999999999999999999999999999988665432 3
Q ss_pred EEEEEcCCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHH-hCCcceecCCCCCcccchhhhhCCCCCCcccccccccceEe
Q 048392 102 FVIIDFINLSSVSVDPEAKTAWVQAGATNGKVYHTIAE-KSKTLAFPAGVCPTVGVGGLFSGGGYGFLMRKYGLAADNVV 180 (515)
Q Consensus 102 gvvIdl~~l~~v~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~ 180 (515)
+++|||++||+|++|++..+|+||||+++.+|+++|.+ + |+.++.|.|++|||||+++|||+|+++++||+++|+|+
T Consensus 104 gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~--Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~ 181 (530)
T 2y3s_A 104 RVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVW--GVTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLH 181 (530)
T ss_dssp CEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHH--SCCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEE
T ss_pred eEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhc--CeEEeCCCCCCCCcCCCcCCCCCCcccccccchhhhee
Confidence 89999999999999999999999999999999999985 7 57888999999999999999999999999999999999
Q ss_pred EEEEEec--CCcEEe---cCC-CCc--chhhhhhcccCCceeEEEEEEEEE------------EeeCc-eEEEEEEeecc
Q 048392 181 DAHLIDV--NGRLLD---RKS-MGE--DLFWAIRGGGGASFGVIIAWKIKL------------VTVPE-IVTAFTVNRTL 239 (515)
Q Consensus 181 ~~~vv~~--~G~~~~---~~~-~~~--dL~~a~rg~~~g~~Givt~~~~~l------------~~~~~-~~~~~~~~~~~ 239 (515)
++|||++ +|+++. +.. +++ |||||+|||++|+|||||+++||+ +|.++ .+..+.+.|+.
T Consensus 182 ~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 261 (530)
T 2y3s_A 182 AVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPW 261 (530)
T ss_dssp EEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEES
T ss_pred eEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecc
Confidence 9999994 599742 322 455 499999998668999999999999 88875 45555565543
Q ss_pred h----hHHHHHHHHHHHHHhh--cccc----ceEEEEEEeccCCCCCCceeEEEEEEEEeCCccchhhhhhhhCC---C-
Q 048392 240 E----QNATKIVDRWQHVADN--LDED----LYIRVFLRSANSSTQGKKTIRASFESLFLGGADVLLPLMQHSFP---E- 305 (515)
Q Consensus 240 ~----~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~---~- 305 (515)
. +.+.++++.|+++... .|++ +...+.+... ... .+.+...|.|+.++..+++++++. .
T Consensus 262 ~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~g~~~~~~~~l~p~~~~l~~~ 334 (530)
T 2y3s_A 262 EGLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS-----QSG--ALAMTTQLDATGPDAEKRLETYLAAVSEG 334 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG-----GGS--EEEEEEEEECCSTTHHHHHHHHHHHHHTT
T ss_pred cccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC-----CCC--cEEEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 1 2346778888877654 3544 2332222211 111 234456788887766666654221 1
Q ss_pred CC-CccccceecCHHHHHHHHhccCCCchhhhccCCCCCCcceeeeccCccCCCCHHHHHHHHHHHHhcC--CceeEEEE
Q 048392 306 LG-LVKEDCIEMSWIESIMYFAGFRGQSLDVLLNRTQPNVRFFKAKSDFVYDPMPEIAFQGIYERFYEKE--AEAAEMIL 382 (515)
Q Consensus 306 l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~--~~~~~i~~ 382 (515)
++ +....+..++|.+........+ ... . ...++.++.|+.++++++.++.+++.+...+ ...+.+.+
T Consensus 335 ~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~--~-~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 404 (530)
T 2y3s_A 335 VGVQPHSDTRRLPWLHSTRWPGIAG-------DGD--M-TGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVAL 404 (530)
T ss_dssp CSSCCEEEEEEEEHHHHTTCHHHHC-------CCC--C-CSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEE
T ss_pred cCCCccceeeeccHHHHHHhhcCCC-------CCc--c-cccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEE
Confidence 22 2334456778877432221100 000 0 1234556777776788899999999887642 23467889
Q ss_pred EecCCccCCCCCCCCCCcccCCCeEEEEEEEEeCCCChhhhHHHHHHHHHHHHhhccccC------CCCCceecccCCCc
Q 048392 383 SPYGGVMNQISDSATPFPHRAGTRYKIQHIVYWEEEGSEASQRHISWIRRLYDYVAPYVS------KNPRAAYLNYRDLD 456 (515)
Q Consensus 383 ~~~GGai~~v~~~~tAf~~Rd~~~~~~~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~------~~~~g~YvNYad~~ 456 (515)
+++||++++++.++|||+||+ +.|++++.+.|.++ +.++.+.+|++++++.+.+... ....++|+||+|.+
T Consensus 405 ~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~ 481 (530)
T 2y3s_A 405 IAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDP--AQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVD 481 (530)
T ss_dssp EECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCT--TCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGG
T ss_pred EecCCccccCCCCcCcccccc-cceeEEEEEecCCC--cchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCcc
Confidence 999999999999999999999 68999999999876 3457889999999998873211 11357999999998
Q ss_pred cCCCCCCCcchhhhhhhHhhhhcccHHHHHHhhhccCCCCCcccCCCCCCC
Q 048392 457 IGTNNKGYTSYKQASIWGLKYFKNNFKRLVDVKTMVDPGNFFRNEQSIPPL 507 (515)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~yyG~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 507 (515)
++.++ ++++. ..|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 482 ~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 482 LADEE-WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp GGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 75211 12221 2499999999999999999999999999999999986
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=4.7e-65 Score=537.76 Aligned_cols=437 Identities=22% Similarity=0.338 Sum_probs=334.8
Q ss_pred ccceEecCCCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCC
Q 048392 21 ISKLIYTRTNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHV 100 (515)
Q Consensus 21 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~ 100 (515)
+.+.|++|+++.|+.++. +|+......|.+||+|+|++||+++|++|+++++|+.++|||||+.+.+...+
T Consensus 12 ~~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~~--- 82 (459)
T 2bvf_A 12 IQGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATNDG--- 82 (459)
T ss_dssp CSSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCSS---
T ss_pred CCceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccCC---
Confidence 468899999999998743 46666667999999999999999999999999999999999999988765444
Q ss_pred CEEEEEcCCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHHhCCcceecCCCCCcccchhhhhCCCCCCcccccccccceEe
Q 048392 101 PFVIIDFINLSSVSVDPEAKTAWVQAGATNGKVYHTIAEKSKTLAFPAGVCPTVGVGGLFSGGGYGFLMRKYGLAADNVV 180 (515)
Q Consensus 101 ~gvvIdl~~l~~v~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~ 180 (515)
+++|||++||+|++|+++.+|+||||++|.+|+++|.++ |+.+++|.|+.+||||+++|||+|+++++||+++|+|+
T Consensus 83 -gvvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~--Gl~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~ 159 (459)
T 2bvf_A 83 -GIVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKF--GLAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNIL 159 (459)
T ss_dssp -SEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTT--TEEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEE
T ss_pred -eEEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHc--CCEecCCCCCCcccceeecCCCCccccccccCHhHhEE
Confidence 899999999999999999999999999999999999988 68889999999999999999999999999999999999
Q ss_pred EEEEEecCCcEEe-cCCCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecchhHHH--HHHHHHHHHHhhc
Q 048392 181 DAHLIDVNGRLLD-RKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTLEQNAT--KIVDRWQHVADNL 257 (515)
Q Consensus 181 ~~~vv~~~G~~~~-~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 257 (515)
++|||++||++++ +..+++||||++|||+ |+|||||+++||++|.|+.+....+.|+..+ +. ++++.|+++....
T Consensus 160 ~~~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 237 (459)
T 2bvf_A 160 GATLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEM 237 (459)
T ss_dssp EEEEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhC
Confidence 9999999999997 5567899999999987 8999999999999999766666666666432 34 7888888887777
Q ss_pred cccceEEEEEEeccCCCCCCceeEEEEEEEEeCCccchhhhhhhhCCCCC-CccccceecCHHHHHHHHhccCCCchhhh
Q 048392 258 DEDLYIRVFLRSANSSTQGKKTIRASFESLFLGGADVLLPLMQHSFPELG-LVKEDCIEMSWIESIMYFAGFRGQSLDVL 336 (515)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (515)
|+.+...+ ... ....+. ..+.+...|.|+.++..+.++++ .++. .....+..++|.+........ +.
T Consensus 238 ~~~~~~~~-~~~--~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~- 305 (459)
T 2bvf_A 238 ADHIYPSV-FVG--VDENRA--PSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNAEV-----GS- 305 (459)
T ss_dssp TTTCCCEE-EEE--ECTTCC--EEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHHHH-----SC-
T ss_pred cHhhcccc-ccC--cccCCC--ceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhccccc-----cc-
Confidence 77764443 211 111122 23455667888876666666543 3343 233455677887633221000 00
Q ss_pred ccCCCCCCcceee-eccCccCCCCHHHHHHHHHHHHhcC-Cc-eeEEEEEecCCccCCCCCCCCCCcccCCCeEEEEEEE
Q 048392 337 LNRTQPNVRFFKA-KSDFVYDPMPEIAFQGIYERFYEKE-AE-AAEMILSPYGGVMNQISDSATPFPHRAGTRYKIQHIV 413 (515)
Q Consensus 337 ~~r~~~~~~~~~~-~s~~~~~~~~~~~~~~l~~~~~~~~-~~-~~~i~~~~~GGai~~v~~~~tAf~~Rd~~~~~~~~~~ 413 (515)
.... ...+.. ++.++.+.++++.++.+++.+.+.+ .. .+.++ .+||++.+ ...+||+||+ ..| +.+..
T Consensus 306 --~~~~-~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~gg~~~~--~~~ta~~~R~-~~~-~~~~~ 376 (459)
T 2bvf_A 306 --FEDG-MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLE--IEGMPFGN--PKRTPARHRD-AMG-VLALA 376 (459)
T ss_dssp --CCCS-CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEE--EECCCCCC--TTCCSSCCCS-SCE-EEEEE
T ss_pred --CCCC-CcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEE--EeCCccCC--CCCCCcccCC-cce-EEEEE
Confidence 0011 112222 4555543355566666666665544 32 23333 33887776 5679999999 477 88889
Q ss_pred EeCCCChhhhHHHHHHHHHHHHhhccccCCCCCceecccCCCccCCCCCCCcchhhhhhhHhhhhccc-HHHHHHhhhcc
Q 048392 414 YWEEEGSEASQRHISWIRRLYDYVAPYVSKNPRAAYLNYRDLDIGTNNKGYTSYKQASIWGLKYFKNN-FKRLVDVKTMV 492 (515)
Q Consensus 414 ~W~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~YvNYad~~~~~~~~~~~~~~~~~~~~~~yyG~n-~~RL~~IK~ky 492 (515)
.|.++. ..++.+.+|++++++.+.++.+.+..|+|+||+|.+.+ +|++.|||+| |+||++||+||
T Consensus 377 ~w~~~~-~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~~-------------~~~~~~yG~~n~~rL~~iK~ky 442 (459)
T 2bvf_A 377 EWSGAA-PGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVTA-------------EMVAEVYKPEVYSRLAAVKREY 442 (459)
T ss_dssp EECTTS-TTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCCH-------------HHHHHHHCHHHHHHHHHHHHHH
T ss_pred EeCCCc-cchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcch-------------HHHHHHhCcchHHHHHHHHHHh
Confidence 998663 13456799999999999988421235789999998622 7999999987 99999999999
Q ss_pred CCCCCcccCCCCCC
Q 048392 493 DPGNFFRNEQSIPP 506 (515)
Q Consensus 493 DP~nvF~~~qsI~~ 506 (515)
||+|+|+++|+|+|
T Consensus 443 DP~~vF~~~~~I~p 456 (459)
T 2bvf_A 443 DPENRFRHNYNIDP 456 (459)
T ss_dssp CTTCCCCSSSCCCC
T ss_pred CcccccCCCCCCCC
Confidence 99999999999987
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=1.7e-40 Score=356.44 Aligned_cols=193 Identities=20% Similarity=0.267 Sum_probs=169.0
Q ss_pred CCCCCCCCCccEEEecCCHHHHHHHHHHHHh--C-CCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCc------EEE
Q 048392 45 RFSTPTTPKPQVIVTPVKESHVQAAVKCSQK--Y-GLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSS------VSV 115 (515)
Q Consensus 45 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~--~-~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~------v~~ 115 (515)
-|+......|.+||+|+|++||+++|++|++ + ++|++++|+|||+.|.+.+.+ +++|||++||+ +++
T Consensus 60 d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~~~~~~----gvvi~l~~m~~i~~~~~~~~ 135 (534)
T 1w1o_A 60 DFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPG----GVVVNMASLGDAAAPPRINV 135 (534)
T ss_dssp CTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCCTT----SEEEEGGGGGCSSSSCSEEE
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCcCCCC----eEEEECccccccccCccEEE
Confidence 3666667799999999999999999999998 6 999999999999998877655 89999999998 488
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHHhCCcceecC-CCCCcccchhhhhCCCCCCcccccccccceEeEEEEEecCCcEEe-
Q 048392 116 DPEAKTAWVQAGATNGKVYHTIAEKSKTLAFPA-GVCPTVGVGGLFSGGGYGFLMRKYGLAADNVVDAHLIDVNGRLLD- 193 (515)
Q Consensus 116 d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~- 193 (515)
|+++.+++||||+++.+|++++.++| +..+. +.+..++|||.++++|.|..+++||.++|+|++++||++||++++
T Consensus 136 d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~ 213 (534)
T 1w1o_A 136 SADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTC 213 (534)
T ss_dssp CTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEE
T ss_pred cCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCCEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEE
Confidence 88889999999999999999999884 55444 444678999999999999999999999999999999999999997
Q ss_pred cCCCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecchhHHH
Q 048392 194 RKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTLEQNAT 244 (515)
Q Consensus 194 ~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~ 244 (515)
+..+|+||||++|||+ |+|||||+++|||+|.|+...++.+.|...+.+.
T Consensus 214 ~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~ 263 (534)
T 1w1o_A 214 SKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWVRFVYTDFAAFS 263 (534)
T ss_dssp ESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHH
T ss_pred CCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHH
Confidence 5567899999999997 7999999999999999987666666665433333
No 12
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.2e-36 Score=320.41 Aligned_cols=202 Identities=23% Similarity=0.298 Sum_probs=176.9
Q ss_pred CCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCcE-EEcCCCCEEE
Q 048392 45 RFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSSV-SVDPEAKTAW 123 (515)
Q Consensus 45 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v-~~d~~~~~v~ 123 (515)
.|+......|.+||+|+|++||+++|++|+++++|++++|||||+.|.+.... ++++|||++||+| ++|+++.+++
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~---ggvvIdl~~m~~i~~id~~~~~v~ 119 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN---GEVVISLKRMDKIREIDTSSNTIT 119 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS---SCEEEECTTCCCEEEEETTTTEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC---CcEEEEeeCCCceEEEcCCCCeEE
Confidence 47665677999999999999999999999999999999999999998877643 4899999999999 8999999999
Q ss_pred EcCCCCHHHHHHHHHHhCCcceec--CCCCCcccchhhhhCCCCCCcccccccccceEeEEEEEecCCcEEe------cC
Q 048392 124 VQAGATNGKVYHTIAEKSKTLAFP--AGVCPTVGVGGLFSGGGYGFLMRKYGLAADNVVDAHLIDVNGRLLD------RK 195 (515)
Q Consensus 124 v~aG~~~~~l~~~l~~~g~~l~~~--~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~------~~ 195 (515)
||||+++.+|.++|.++| +.++ .+++..++|||.+++++.|..+.+||.++|+|++++||++||++++ .+
T Consensus 120 V~aGv~~~~l~~~l~~~G--l~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~ 197 (476)
T 3pm9_A 120 VEAGAILQRVQEKAAEVD--RLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKD 197 (476)
T ss_dssp EETTCBHHHHHHHHHHTT--EECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCC
T ss_pred ECCCcCHHHHHHHHHHhC--CccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCC
Confidence 999999999999999995 5444 4667788999999999999999999999999999999999999986 23
Q ss_pred CCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecchhHHHHHHHHHHH
Q 048392 196 SMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTLEQNATKIVDRWQH 252 (515)
Q Consensus 196 ~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (515)
..++||+|+++|+. |+|||||+++|||+|.|+......+.|+..+++.+++..+++
T Consensus 198 ~~g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 198 NTGYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CSSCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 45789999999987 899999999999999998776667777655556666666654
No 13
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=1.7e-34 Score=308.41 Aligned_cols=198 Identities=24% Similarity=0.320 Sum_probs=167.6
Q ss_pred CCCCCCCCCccEEEecCCHHHHHHHHHHHHh-CCCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCcEEEcC-----C
Q 048392 45 RFSTPTTPKPQVIVTPVKESHVQAAVKCSQK-YGLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSSVSVDP-----E 118 (515)
Q Consensus 45 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~-~~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v~~d~-----~ 118 (515)
-|+......|.+||+|+|++||+++|++|++ +++||++||||||+.|.+.+.+ +|+|||++||+|++++ +
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~----gvvidl~~m~~i~i~~~~~~~~ 128 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG----GLVVDMSTTAENHFEVGYLSGG 128 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT----SEEEEGGGGTTSCEEEEECCSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC----EEEEECcCCCCcEEeecccCCC
Confidence 3666667799999999999999999999996 9999999999999988776555 7999999999987766 5
Q ss_pred C--CEEEEcCCCCHHHHHHHHH-HhCCcceecC-CCCCcccchhhhhCCCCCCcccccccccceEeEEEEEecCCcEEe-
Q 048392 119 A--KTAWVQAGATNGKVYHTIA-EKSKTLAFPA-GVCPTVGVGGLFSGGGYGFLMRKYGLAADNVVDAHLIDVNGRLLD- 193 (515)
Q Consensus 119 ~--~~v~v~aG~~~~~l~~~l~-~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~- 193 (515)
. .+++||||+++.++++++. ++ |+..+. +.++.++|||.++++|.|..+.+||.++|+|++++||++||++++
T Consensus 129 ~~~~~v~v~aGv~~~~l~~~~l~~~--Gl~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~ 206 (524)
T 2exr_A 129 DATAFVDVSGGALWEDVLKRCVSEY--GLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTC 206 (524)
T ss_dssp SSSEEEEEETTCBHHHHHHHHHHHH--SEECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEE
T ss_pred CCceEEEEeCCcCHHHHHHHHHHHc--CCCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEE
Confidence 5 7999999999999866655 87 455222 445678999999999999999999999999999999999999997
Q ss_pred cCCCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecchhHHHHHHHH
Q 048392 194 RKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTLEQNATKIVDR 249 (515)
Q Consensus 194 ~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (515)
....++||||+++|+. |+|||||+++|||+|.|+...++.+.|...+.+.+.+..
T Consensus 207 ~~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~ 261 (524)
T 2exr_A 207 SEIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEW 261 (524)
T ss_dssp ESSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHH
Confidence 4456899999999997 899999999999999999777776777654444444443
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=8.4e-35 Score=318.68 Aligned_cols=204 Identities=22% Similarity=0.231 Sum_probs=176.8
Q ss_pred CCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCccc-CCCCCEEEEEcCCCCcE-EEcCCCCEEE
Q 048392 46 FSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVS-NYHVPFVIIDFINLSSV-SVDPEAKTAW 123 (515)
Q Consensus 46 ~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~-~~~~~gvvIdl~~l~~v-~~d~~~~~v~ 123 (515)
|...+...|.+||+|+|++||+++|++|+++++||+++|||||+.|...+. +...++|+|||++||+| +||+++.+++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 566677899999999999999999999999999999999999987655432 11135899999999998 9999999999
Q ss_pred EcCCCCHHHHHHHHHHhCCcceecCCCCCcccchhhhhCCCCCCcccccccccceEeEEEEEecCCcEEe-----cCCCC
Q 048392 124 VQAGATNGKVYHTIAEKSKTLAFPAGVCPTVGVGGLFSGGGYGFLMRKYGLAADNVVDAHLIDVNGRLLD-----RKSMG 198 (515)
Q Consensus 124 v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-----~~~~~ 198 (515)
||||+++.+|.++|.++|+.+.+.+++...++|||++++++.|..+.+||.++|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999964444445777889999999999999999999999999999999999999985 34567
Q ss_pred cchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecchhHHHHHHHHH
Q 048392 199 EDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTLEQNATKIVDRW 250 (515)
Q Consensus 199 ~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (515)
+||+|+++|+. |+|||||+++|||+|.|+....+.+.|+..+++.+++..+
T Consensus 358 yDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 358 PDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp SCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 99999999998 8999999999999999998777777777655555555544
No 15
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=1.8e-32 Score=293.14 Aligned_cols=199 Identities=23% Similarity=0.329 Sum_probs=165.4
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCC-CCCcccCCCCCEEEEEcCCCCcE-EEcCCCCEEEEcCC
Q 048392 50 TTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYE-GLSYVSNYHVPFVIIDFINLSSV-SVDPEAKTAWVQAG 127 (515)
Q Consensus 50 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~-~~~~~~~~~~~gvvIdl~~l~~v-~~d~~~~~v~v~aG 127 (515)
....|.+||+|+|++||+++|++|+++++|++++|+|||+. |.+.... .++|+|||++||+| ++|+++.+++||||
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~--~~gvvidl~~m~~i~~id~~~~~v~v~aG 130 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQ--RGQVILDLKKMNKIIKIDPEMCYALVEPG 130 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSS--TTCEEEECTTCCCEEEEETTTTEEEECTT
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCC--CCeEEEECCCCCceEEECCCCCEEEECCC
Confidence 34689999999999999999999999999999999999986 6544311 13899999999999 99999999999999
Q ss_pred CCHHHHHHHHHHhCCcceecCC---CCCcccchhhhhCCCCCCcccccccccceEeEEEEEecCCcEEec---CCCCcch
Q 048392 128 ATNGKVYHTIAEKSKTLAFPAG---VCPTVGVGGLFSGGGYGFLMRKYGLAADNVVDAHLIDVNGRLLDR---KSMGEDL 201 (515)
Q Consensus 128 ~~~~~l~~~l~~~g~~l~~~~g---~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~---~~~~~dL 201 (515)
+++.+|+++|.++| +.++.+ ....+||||.+++||.|.. +||.++|+|++++||++||++++. ...++|+
T Consensus 131 v~~~~l~~~l~~~G--l~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l 206 (520)
T 1wvf_A 131 VTFGQMYDYIQENN--LPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNT 206 (520)
T ss_dssp CCHHHHHHHHHHTT--CSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSC
T ss_pred CCHHHHHHHHHHcC--CcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchh
Confidence 99999999999996 445443 3336889999999998876 999999999999999999999973 2357898
Q ss_pred hhhhhcccC---------CceeEEEEEEEEEEeeCceEEEEEEeecchhHHHHHHHHHHHHH
Q 048392 202 FWAIRGGGG---------ASFGVIIAWKIKLVTVPEIVTAFTVNRTLEQNATKIVDRWQHVA 254 (515)
Q Consensus 202 ~~a~rg~~~---------g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (515)
|++.+|+.+ ++|||||+++|||+|.|+....+.+.|+..+++.++++.++++.
T Consensus 207 ~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 207 WQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred HhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 877777652 48999999999999999877777777765455555566666543
No 16
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1.2e-31 Score=282.60 Aligned_cols=178 Identities=20% Similarity=0.291 Sum_probs=158.6
Q ss_pred CCCCCCCCCccEEEecCCHHHHHHHHHHHHhC--CCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCcE-EEcCCCCE
Q 048392 45 RFSTPTTPKPQVIVTPVKESHVQAAVKCSQKY--GLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSSV-SVDPEAKT 121 (515)
Q Consensus 45 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~--~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v-~~d~~~~~ 121 (515)
+|.. ....|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+...+ +++|||++||+| ++|++.++
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~~----gvvIdl~~l~~i~~~d~~~~~ 109 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNGG----GLVIDMTPLNTIHSIDADTKL 109 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCTT----SEEEECTTCCCEEEEETTTTE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCcC----eEEEECccCCCceEEcCCCCE
Confidence 4743 578999999999999999999999999 799999999999976654434 899999999999 99999999
Q ss_pred EEEcCCCCHHHHHHHHHHhCCcceecC-CCCCcccchhhhhCCCCCCcccccccccceEeEEEEEecCCcEEe-cCC-CC
Q 048392 122 AWVQAGATNGKVYHTIAEKSKTLAFPA-GVCPTVGVGGLFSGGGYGFLMRKYGLAADNVVDAHLIDVNGRLLD-RKS-MG 198 (515)
Q Consensus 122 v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~-~~ 198 (515)
|+||||+++.+|+++|.++| +.++. +....++|||.+++|++|..++.||..+|+|++++||++||++++ +.. ++
T Consensus 110 v~v~aGv~l~~L~~~l~~~G--l~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~ 187 (481)
T 4feh_A 110 VDIDAGVNLDQLMKAALPFG--LWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGED 187 (481)
T ss_dssp EEEETTCBHHHHHHHHGGGT--EECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTT
T ss_pred EEEcCCccHHHHHHHHHHcC--CEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCC
Confidence 99999999999999999995 55543 333568899999999999999999999999999999999999997 555 78
Q ss_pred cchhhhhhcccCCceeEEEEEEEEEEeeCceE
Q 048392 199 EDLFWAIRGGGGASFGVIIAWKIKLVTVPEIV 230 (515)
Q Consensus 199 ~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~ 230 (515)
+||||++|||. |+|||||+++||++|.++..
T Consensus 188 ~dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~ 218 (481)
T 4feh_A 188 AELFWATVGGN-GLTGIIMRATIEMTPTSTAY 218 (481)
T ss_dssp HHHHHHHTTCT-TTTCEEEEEEEECEECSCSE
T ss_pred hHHHHHhhccC-CCceEEEEEEEEEEeCCccE
Confidence 99999999987 89999999999999988644
No 17
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.98 E-value=2.1e-30 Score=270.52 Aligned_cols=175 Identities=22% Similarity=0.308 Sum_probs=154.8
Q ss_pred CCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCcE-EEcCCCCEEE
Q 048392 45 RFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSSV-SVDPEAKTAW 123 (515)
Q Consensus 45 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v-~~d~~~~~v~ 123 (515)
.|+......|.+|++|+|++||+++|++| +|++++|+|||+.+.+.... ++++|||++||+| ++|+++++|+
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~~---~g~vi~l~~l~~i~~~d~~~~~v~ 84 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPGD---GGVLLSLAGLPSVVDVDTAARTVR 84 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCCT---TCEEECSTTSCCCEEEETTTTEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCCC---CcEEEEhhhCCCcEEEcCCCCEEE
Confidence 47777778999999999999999999998 89999999999988776312 3899999999997 9999999999
Q ss_pred EcCCCCHHHHHHHHHHhCCcceecC-CCCCcccchhhhhCCCCCCcccccccccceEeEEEEEecCCcEEe-cCCCCcch
Q 048392 124 VQAGATNGKVYHTIAEKSKTLAFPA-GVCPTVGVGGLFSGGGYGFLMRKYGLAADNVVDAHLIDVNGRLLD-RKSMGEDL 201 (515)
Q Consensus 124 v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~dL 201 (515)
||||+++.+|.++|.++| +.++. +.++.++|||.+++|++|.. .+||.++|+|+++++|++||++++ +..+++
T Consensus 85 v~aG~~l~~l~~~l~~~G--l~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~-- 159 (422)
T 2vfr_A 85 VGGGVRYAELARVVHARG--LALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER-- 159 (422)
T ss_dssp EETTCBHHHHHHHHHHTT--EECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--
T ss_pred EcCCCCHHHHHHHHHHcC--CcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--
Confidence 999999999999999995 55554 77888999999999999976 799999999999999999999997 444455
Q ss_pred hhhhhcccCCceeEEEEEEEEEEeeCceEEE
Q 048392 202 FWAIRGGGGASFGVIIAWKIKLVTVPEIVTA 232 (515)
Q Consensus 202 ~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~ 232 (515)
||+++|+. |++||||+++||++|.++....
T Consensus 160 f~~~~g~~-G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 160 FGGAVTSL-GALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp GGGTSSCT-TTTCEEEEEEEECEECCEEEEE
T ss_pred cceEEecC-CCCEEEEEEEEEEEecCceEEE
Confidence 89999987 8999999999999999875433
No 18
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=9.8e-32 Score=289.30 Aligned_cols=199 Identities=21% Similarity=0.270 Sum_probs=167.5
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCcE-EEcCCCCEEEEcCCC
Q 048392 50 TTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSSV-SVDPEAKTAWVQAGA 128 (515)
Q Consensus 50 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v-~~d~~~~~v~v~aG~ 128 (515)
....|.+||+|+|++||+++|++|+++++|++++|||||+.+.+......+++|+|||++||+| ++|+++.+++||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 3468999999999999999999999999999999999999876654310124899999999999 899999999999999
Q ss_pred CHHHHHHHHHHhCCcceecCC--CCCcccchhhhhCCCCCCcccccccccceEeEEEEEecCCcEEe----cCCCCcchh
Q 048392 129 TNGKVYHTIAEKSKTLAFPAG--VCPTVGVGGLFSGGGYGFLMRKYGLAADNVVDAHLIDVNGRLLD----RKSMGEDLF 202 (515)
Q Consensus 129 ~~~~l~~~l~~~g~~l~~~~g--~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~----~~~~~~dL~ 202 (515)
++.+|.++|.++| +.++.. +...++|||++++|+.|+.+.+||.++|+|++++||++||++++ +...++||+
T Consensus 214 ~~~~l~~~l~~~G--l~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~ 291 (584)
T 2uuu_A 214 MGPELEKQLHKQG--VSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYK 291 (584)
T ss_dssp BHHHHHHHHHHTT--EECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTH
T ss_pred cHHHHHHHHHHcC--CeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchh
Confidence 9999999999995 555443 34557999999999999999999999999999999999999886 345789999
Q ss_pred hhhhcccCCceeEEEEEEEEEEeeCceEEEEEEeecchhHHHHHHHHHH
Q 048392 203 WAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVNRTLEQNATKIVDRWQ 251 (515)
Q Consensus 203 ~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (515)
|+++|+. |+|||||+++|||+|.|+....+.+.|+..+++.+++..+.
T Consensus 292 ~~~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 292 HIILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp HHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred hhhccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 9999987 89999999999999999877677777765444455554443
No 19
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.97 E-value=5.1e-29 Score=268.27 Aligned_cols=200 Identities=18% Similarity=0.162 Sum_probs=162.9
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCC-CCCcc-cCCCCCEEEEEc-CCCCcE-EEcCCCCEEEEc
Q 048392 50 TTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYE-GLSYV-SNYHVPFVIIDF-INLSSV-SVDPEAKTAWVQ 125 (515)
Q Consensus 50 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~-~~~~~-~~~~~~gvvIdl-~~l~~v-~~d~~~~~v~v~ 125 (515)
....|.+||+|+|++||+++|++|+++++||+++|+|||+. |...+ .. ++|+||| ++||+| ++|+++.+|+||
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~---~gvvidl~~~mn~il~id~~~~~v~v~ 143 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVS---GSVVLDMGKNMNRVLEVNVEGAYCVVE 143 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSST---TCEEEECTTTCCCEEEEETTTTEEEEC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcC---CEEEEEchHhcCCeEEEcCCCCEEEEe
Confidence 45689999999999999999999999999999999999986 55443 22 3899999 899999 999999999999
Q ss_pred CCCCHHHHHHHHHHhCCc--ceecCCCCCcccchhhhhCCCCCCcccccccccceEeEEEEEecCCcEEecC---CCCc-
Q 048392 126 AGATNGKVYHTIAEKSKT--LAFPAGVCPTVGVGGLFSGGGYGFLMRKYGLAADNVVDAHLIDVNGRLLDRK---SMGE- 199 (515)
Q Consensus 126 aG~~~~~l~~~l~~~g~~--l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~---~~~~- 199 (515)
||+++.+|.++|.++|+. +.+.++....+||||.++++|.|+. +||..+|+|++++||++||++++.. ..++
T Consensus 144 aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~ 221 (560)
T 1e8g_A 144 PGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPK 221 (560)
T ss_dssp TTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCC
T ss_pred CCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCccc
Confidence 999999999999999654 3322344446789999999988865 9999999999999999999999722 1221
Q ss_pred --------------chhhhhhcc----------cCCceeEEEEEEEEEEeeCceEEEEEEeecchhHHHHHHHHHHHHH
Q 048392 200 --------------DLFWAIRGG----------GGASFGVIIAWKIKLVTVPEIVTAFTVNRTLEQNATKIVDRWQHVA 254 (515)
Q Consensus 200 --------------dL~~a~rg~----------~~g~~Givt~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (515)
+++|+++++ .+|+|||||+++|||+|.|+....+.+.|+..+++.+++.+++++.
T Consensus 222 ~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 222 RPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp CGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 556666543 2379999999999999999987777777876555666666666554
No 20
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=1.4e-29 Score=272.15 Aligned_cols=200 Identities=13% Similarity=0.127 Sum_probs=166.4
Q ss_pred cceEecC-CCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCC-C
Q 048392 22 SKLIYTR-TNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNY-H 99 (515)
Q Consensus 22 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~-~ 99 (515)
...|++| +++.|++.. ..|+......|.+|++|+|++||+++|++|+++++|++++|+|||+.+.+...+. .
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 4678889 999999863 3487777789999999999999999999999999999999999998654332110 0
Q ss_pred CCEEEEEc-CCCCcEEEcC--CCCEEEEcCCCCHHHHHHHHHHhCCcceecC-CCCCcccchhhhhCCCCCCc-------
Q 048392 100 VPFVIIDF-INLSSVSVDP--EAKTAWVQAGATNGKVYHTIAEKSKTLAFPA-GVCPTVGVGGLFSGGGYGFL------- 168 (515)
Q Consensus 100 ~~gvvIdl-~~l~~v~~d~--~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~------- 168 (515)
.++++||| ++||+|++|+ +..+|+||||+++.+|.++|.++| +.++. +..+.++|||.+.+|++|..
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~G--l~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~ 160 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHD--LGWANLPAPGVLSIGGALAVNAHGAALPAVGQT 160 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTT--EECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcC--CcccccCCCCCcccCCCcccCCcccccccCCcc
Confidence 13899999 8999999998 789999999999999999999995 45554 33366889999998888875
Q ss_pred ---ccccccccceEeEEEEEecCCc---EEecCCCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEE
Q 048392 169 ---MRKYGLAADNVVDAHLIDVNGR---LLDRKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTA 232 (515)
Q Consensus 169 ---~~~~G~~~d~v~~~~vv~~~G~---~~~~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~ 232 (515)
+.+||.++|+|++++||++||+ +++...+++||+|+++|.| . ||||+++|||+|.++....
T Consensus 161 ~~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~~ 227 (561)
T 2i0k_A 161 TLPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRCQ 227 (561)
T ss_dssp CCTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEEE
T ss_pred cccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C-EEEEEEEEEEEECCceEEE
Confidence 7789999999999999999999 6653345799999998654 3 8999999999999875443
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=4.9e-29 Score=262.53 Aligned_cols=190 Identities=15% Similarity=0.198 Sum_probs=155.3
Q ss_pred CCCCchhHHhhcccccCCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccC-CCCCEEEEEc
Q 048392 29 TNSSFSSILDFSIQNLRFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSN-YHVPFVIIDF 107 (515)
Q Consensus 29 ~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~-~~~~gvvIdl 107 (515)
+.+.|++.. ..|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+.....+ ..+++|+|||
T Consensus 11 ~i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdl 84 (540)
T 3js8_A 11 EIPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDT 84 (540)
T ss_dssp TSCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEET
T ss_pred ccchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEEC
Confidence 556776652 248888888999999999999999999999999999999999999863221110 0124899999
Q ss_pred C-CCCcEEEcCC--CCEEEEcCCCCHHHHHHHHHHhCCcceecC-CCCCcccchhhhhCCCCCCc----------ccccc
Q 048392 108 I-NLSSVSVDPE--AKTAWVQAGATNGKVYHTIAEKSKTLAFPA-GVCPTVGVGGLFSGGGYGFL----------MRKYG 173 (515)
Q Consensus 108 ~-~l~~v~~d~~--~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~----------~~~~G 173 (515)
+ +||+|++|++ ..+|+||||+++.+|+++|.++| +.++. +..+.++|||.+++|++|.. +++||
T Consensus 85 s~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G 162 (540)
T 3js8_A 85 TRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYG 162 (540)
T ss_dssp TTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSS
T ss_pred cCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccc
Confidence 5 6999999885 57999999999999999999985 55553 33567899999999999986 68999
Q ss_pred cccceEeEEEEEecCCc-----EEecCCCCcchhhhhhcccCCceeEEEEEEEEEEeeCce
Q 048392 174 LAADNVVDAHLIDVNGR-----LLDRKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEI 229 (515)
Q Consensus 174 ~~~d~v~~~~vv~~~G~-----~~~~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~ 229 (515)
+++|+|++++||++||+ +++.+.+++||+ ++|+|. |. ||||+++||++|.+..
T Consensus 163 ~~~D~V~~levV~adG~~~~~~i~~~s~~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l 220 (540)
T 3js8_A 163 SISNLVLSLTAVVYDKASGAYALRKFARNDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRL 220 (540)
T ss_dssp CGGGGEEEEEEEEEETTTTEEEEEEEETTSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEE
T ss_pred cHHHhEEEEEEEcCCCCCceeeEEEeCCCChhHH-HHHhcC-CC-eEEEEEEEEEEECCce
Confidence 99999999999999998 666334689985 556565 55 6999999999998764
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=1.1e-28 Score=263.68 Aligned_cols=197 Identities=13% Similarity=0.090 Sum_probs=164.7
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCC--CCCEEEEEcCCCCcE-EEcCCCCEEEEcC
Q 048392 50 TTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNY--HVPFVIIDFINLSSV-SVDPEAKTAWVQA 126 (515)
Q Consensus 50 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~--~~~gvvIdl~~l~~v-~~d~~~~~v~v~a 126 (515)
....|.+||+|+|++||+++|++|+++++||.++|||||+.|.+.+.+. .+++|+|||++||+| ++|+ +++|+|||
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 4568999999999999999999999999999999999999887766430 013899999999999 8984 57999999
Q ss_pred CCCHHHHHHHHHHhCCcceecC---CCCCcccchhhhhCCCCCCcccccccccc----------------eEeEEEEEec
Q 048392 127 GATNGKVYHTIAEKSKTLAFPA---GVCPTVGVGGLFSGGGYGFLMRKYGLAAD----------------NVVDAHLIDV 187 (515)
Q Consensus 127 G~~~~~l~~~l~~~g~~l~~~~---g~~~~vgigG~~~ggg~g~~~~~~G~~~d----------------~v~~~~vv~~ 187 (515)
|+++.+|.++|.++| +.++. ++|..++|||.+++++.|..+.+||..+| +|++++||++
T Consensus 121 Gv~l~~L~~~l~~~G--l~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~ 198 (571)
T 1f0x_A 121 GTTLYSLEKALKPLG--REPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGET 198 (571)
T ss_dssp TCBHHHHHHHHGGGT--EECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSS
T ss_pred CcCHHHHHHHHHhcC--ccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcC
Confidence 999999999999995 44433 34456789999999999999999999999 9999999999
Q ss_pred CCcEEe-c-----------------CCCCc-----------------chhhhh--hcccCCceeEEEEEEEEEEeeCceE
Q 048392 188 NGRLLD-R-----------------KSMGE-----------------DLFWAI--RGGGGASFGVIIAWKIKLVTVPEIV 230 (515)
Q Consensus 188 ~G~~~~-~-----------------~~~~~-----------------dL~~a~--rg~~~g~~Givt~~~~~l~~~~~~~ 230 (515)
||++++ . ...++ ||+|++ +|+. |+||| |+++|||+|.|+..
T Consensus 199 dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~ 276 (571)
T 1f0x_A 199 PEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQ 276 (571)
T ss_dssp HHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSC
T ss_pred CCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeE
Confidence 999885 2 12334 998888 9887 89999 99999999999876
Q ss_pred EEEEEeecchhHHHHHHHHHH
Q 048392 231 TAFTVNRTLEQNATKIVDRWQ 251 (515)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~ 251 (515)
..+.+.++..+++.+++..+.
T Consensus 277 ~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 277 QVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHHH
Confidence 667777765555555565554
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.93 E-value=5.6e-26 Score=226.53 Aligned_cols=164 Identities=18% Similarity=0.156 Sum_probs=134.0
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCcEEEcCCCCEEEEcCCCC
Q 048392 50 TTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSSVSVDPEAKTAWVQAGAT 129 (515)
Q Consensus 50 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v~~d~~~~~v~v~aG~~ 129 (515)
....|.++|+|+|++||+++|++|+++++|+.++|+|||+.+.+.+.+ +++|||++|++|++| +.+++|+||++
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~----gvvI~l~~~~~I~~d--~~~v~v~aG~~ 124 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR----GVILHLDLLQTIERN--NTQIVAMSGAK 124 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE----EEEEECTTCCCEEEE--TTEEEEETTSB
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC----eEEEECCCCCcEEEC--CCEEEEecCcC
Confidence 456899999999999999999999999999999999999876554444 899999999999875 45999999999
Q ss_pred HHHHHHHHHHhCC-cceecCCCCCcccchhhhhCCCCCCccccc-ccccceEeEEEEEecCCcEEecCCCCcchhhhhhc
Q 048392 130 NGKVYHTIAEKSK-TLAFPAGVCPTVGVGGLFSGGGYGFLMRKY-GLAADNVVDAHLIDVNGRLLDRKSMGEDLFWAIRG 207 (515)
Q Consensus 130 ~~~l~~~l~~~g~-~l~~~~g~~~~vgigG~~~ggg~g~~~~~~-G~~~d~v~~~~vv~~~G~~~~~~~~~~dL~~a~rg 207 (515)
|.+|++++.++|+ |+.+..|.+.+ |||.+..++.| | |.++|+|++++||++||++++.. .+|++|+||+
T Consensus 125 ~~~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~ 195 (322)
T 3tx1_A 125 LIDTAKFALNESLSGLEFACGIPGS--IGGALHMNAGA-----YGGEISDVLEAATVLTQTGELKKLK--RSELKAAYRF 195 (322)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-
T ss_pred HHHHHHHHHHcCCcccccCCCCcch--hHHHHHhCccC-----cccchHhhEEEEEEEcCCCCEEEec--hHHcCcchhh
Confidence 9999999999965 44466777654 55555533322 3 78999999999999999999743 3699999998
Q ss_pred ccCC-ceeEEEEEEEEEEeeCc
Q 048392 208 GGGA-SFGVIIAWKIKLVTVPE 228 (515)
Q Consensus 208 ~~~g-~~Givt~~~~~l~~~~~ 228 (515)
+..+ ++||||+++|||+|.|+
T Consensus 196 s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 196 STIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp CTTTGGGCEEEEEEEECEECCH
T ss_pred cccCCCCEEEEEEEEEEEeCCH
Confidence 7544 57899999999999864
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=1.4e-25 Score=225.81 Aligned_cols=166 Identities=13% Similarity=0.049 Sum_probs=145.8
Q ss_pred CCCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCcEEEcC--CCCEEEEcC
Q 048392 49 PTTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSSVSVDP--EAKTAWVQA 126 (515)
Q Consensus 49 ~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v~~d~--~~~~v~v~a 126 (515)
.....|.++|+|+|++||+++|++|+++++|+.++|+|||+.+.+. .+ |+||+++ |++|+++. +..+++|+|
T Consensus 26 ~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~----GvVI~l~-~~~i~v~~~~~~~~v~v~A 99 (357)
T 3i99_A 26 GIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT----GMIVVNR-LNGIEHQQDDDYHRLHVAG 99 (357)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE----EEEEEEC-CCCEEEEECSSEEEEEEET
T ss_pred CCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC----eEEEEcC-CCceEEeccCCceEEEEeC
Confidence 3456889999999999999999999999999999999999876665 54 8999998 99998753 456899999
Q ss_pred CCCHHHHHHHHHHhCCcceecCCCCCcccchhhhhCCCCCCccccccc-ccceEeEEEEEec-CCcEEecCCCCcchhhh
Q 048392 127 GATNGKVYHTIAEKSKTLAFPAGVCPTVGVGGLFSGGGYGFLMRKYGL-AADNVVDAHLIDV-NGRLLDRKSMGEDLFWA 204 (515)
Q Consensus 127 G~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~d~v~~~~vv~~-~G~~~~~~~~~~dL~~a 204 (515)
|++|.+|.+++.++| | .|.++.+||+| +.||+.+++.+.||. ++|+|+++++|++ +|++++.. +.||+|+
T Consensus 100 G~~~~~l~~~a~~~G--l---~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~ 171 (357)
T 3i99_A 100 GEDWPSLVSWCVEQG--I---GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFG 171 (357)
T ss_dssp TSBHHHHHHHHHHTT--C---TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCB
T ss_pred CCcHHHHHHHHHHcC--C---cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCcc
Confidence 999999999999995 4 57888889988 778999999999997 8999999999998 99999743 3599999
Q ss_pred hhcccC----CceeEEEEEEEEEEeeCc
Q 048392 205 IRGGGG----ASFGVIIAWKIKLVTVPE 228 (515)
Q Consensus 205 ~rg~~~----g~~Givt~~~~~l~~~~~ 228 (515)
||++.. +++||||+++|||+|.+.
T Consensus 172 YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 172 YRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 998864 379999999999999754
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=8.9e-25 Score=219.28 Aligned_cols=162 Identities=20% Similarity=0.213 Sum_probs=134.0
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCcEEEcCCCCEEEEcCCCC
Q 048392 50 TTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSSVSVDPEAKTAWVQAGAT 129 (515)
Q Consensus 50 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v~~d~~~~~v~v~aG~~ 129 (515)
....|.+|++|+|++||+++|++|+++++|++++|||||+.+.+.+.+ +++|||++||+|++| ..+++||||++
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~----gvvI~l~~m~~i~id--~~~v~v~aGv~ 118 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR----GIVISLLSLDHIEVS--DDAIIAGSGAA 118 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE----EEEEECTTCCCEEEE--TTEEEEETTSB
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC----eEEEEeCCCCceEEc--CCEEEEeCCCc
Confidence 456899999999999999999999999999999999999876655444 899999999999887 47999999999
Q ss_pred HHHHHHHHHHhCC-cceecCCCCCcccchhhhhCCCCCCcccccc-cccceEeEEEEEecCCcEEecCCCCcchhhhhhc
Q 048392 130 NGKVYHTIAEKSK-TLAFPAGVCPTVGVGGLFSGGGYGFLMRKYG-LAADNVVDAHLIDVNGRLLDRKSMGEDLFWAIRG 207 (515)
Q Consensus 130 ~~~l~~~l~~~g~-~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~d~v~~~~vv~~~G~~~~~~~~~~dL~~a~rg 207 (515)
+.+|.+++.++|+ +|.+.++... +|||.+..++.| || .++|+|++++||++||++++... .|++|+||.
T Consensus 119 ~~~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~ 189 (326)
T 1hsk_A 119 IIDVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRN 189 (326)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTB
T ss_pred HHHHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccc
Confidence 9999999999965 3334444433 578877765544 88 99999999999999999987433 288999997
Q ss_pred ccC-CceeEEEEEEEEEEee
Q 048392 208 GGG-ASFGVIIAWKIKLVTV 226 (515)
Q Consensus 208 ~~~-g~~Givt~~~~~l~~~ 226 (515)
+.. +.-||||+++||++|.
T Consensus 190 ~~l~s~ggIIt~~~l~l~p~ 209 (326)
T 1hsk_A 190 SIIQKEHLVVLEAAFTLAPG 209 (326)
T ss_dssp CHHHHTTCEEEEEEEECEEC
T ss_pred cccCCCCEEEEEEEEEEEcC
Confidence 421 1119999999999997
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.91 E-value=4.6e-24 Score=214.28 Aligned_cols=165 Identities=15% Similarity=0.089 Sum_probs=143.4
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCcE-EEcCCC-CEEEEcCC
Q 048392 50 TTPKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSSV-SVDPEA-KTAWVQAG 127 (515)
Q Consensus 50 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v-~~d~~~-~~v~v~aG 127 (515)
....|.++++|+|++||+++|++|+++++|+.++|+|||+.+.+. .+ |+||+|+ |+++ .++.++ .+++|+||
T Consensus 11 igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~----GvVI~l~-~~~i~~i~~~~~~~v~vgAG 84 (340)
T 1uxy_A 11 IDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR----GTVIINR-IKGIEIHDEPDAWYLHVGAG 84 (340)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE----EEEEEEC-CCCEEEEECSSEEEEEEETT
T ss_pred CCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC----eEEEEcc-CCCcEEEecCCCeEEEEecC
Confidence 345799999999999999999999999999999999999877654 44 8999996 9998 466666 69999999
Q ss_pred CCHHHHHHHHHHhCCcceecCCCCCcccchhhhhCCCCCCccccccc-ccceEeEEEEEec-CCcEEecCCCCcchhhhh
Q 048392 128 ATNGKVYHTIAEKSKTLAFPAGVCPTVGVGGLFSGGGYGFLMRKYGL-AADNVVDAHLIDV-NGRLLDRKSMGEDLFWAI 205 (515)
Q Consensus 128 ~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~d~v~~~~vv~~-~G~~~~~~~~~~dL~~a~ 205 (515)
++|.+|.+++.++| | .|.++.+||+| +.||+..++.+.||. ++|+|+++++|++ +|++++.. +.|++|+|
T Consensus 85 ~~~~~l~~~~~~~G--l---~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gY 156 (340)
T 1uxy_A 85 ENWHRLVKYTLQEG--M---PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGY 156 (340)
T ss_dssp SBHHHHHHHHHHTT--C---CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBT
T ss_pred CCHHHHHHHHHHCC--C---CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhcccc
Confidence 99999999999985 4 57788888988 778999999999995 8999999999996 99998743 35999999
Q ss_pred hcccC----CceeEEEEEEEEEEeeCc
Q 048392 206 RGGGG----ASFGVIIAWKIKLVTVPE 228 (515)
Q Consensus 206 rg~~~----g~~Givt~~~~~l~~~~~ 228 (515)
|++.. +++||||+++|||+|.+.
T Consensus 157 R~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 157 RDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp TBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 98753 258999999999999753
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.87 E-value=5e-23 Score=199.60 Aligned_cols=152 Identities=18% Similarity=0.164 Sum_probs=129.9
Q ss_pred CCccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccCCCCCEEEEEcCCCCcEEEcCCCCEEEEcCCCCHH
Q 048392 52 PKPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYVSNYHVPFVIIDFINLSSVSVDPEAKTAWVQAGATNG 131 (515)
Q Consensus 52 ~~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~~~~~~~gvvIdl~~l~~v~~d~~~~~v~v~aG~~~~ 131 (515)
..|. +|+|+|++||+++| ++|+.++|+|||+.+.+.+.+ +|++|+|++|++|++| + +|+||++|.
T Consensus 21 g~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~---~GvVI~l~~~~~I~vd--~---~v~aG~~~~ 85 (268)
T 2gqt_A 21 GPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP---ERVIRLAGEFQTYDLK--G---WVGAGTLLP 85 (268)
T ss_dssp CEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS---SEEEEECGGGGCBCTT--S---EEETTSBHH
T ss_pred cceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC---CeEEEEcCCCCCcEEc--C---EEECCCCHH
Confidence 4566 99999999999999 899999999999887665443 4899999999999865 2 999999999
Q ss_pred HHHHHHHHhCCcceecCCCCCcccchhhhhCCCCCCcccccc-cccceEeEEEEEecCCcEEecCCCCcchhhhhhcccC
Q 048392 132 KVYHTIAEKSKTLAFPAGVCPTVGVGGLFSGGGYGFLMRKYG-LAADNVVDAHLIDVNGRLLDRKSMGEDLFWAIRGGGG 210 (515)
Q Consensus 132 ~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~d~v~~~~vv~~~G~~~~~~~~~~dL~~a~rg~~~ 210 (515)
+|.+++.++| | .|.++.++|+| ++||+..++.+.|| .++|+|++++|| ++|++++.. +.|++|+||++..
T Consensus 86 ~l~~~~~~~G--l---~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~ 156 (268)
T 2gqt_A 86 LLVQEAARAG--L---SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHL 156 (268)
T ss_dssp HHHHHHHHTT--E---ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCC
T ss_pred HHHHHHHHcC--C---cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCc
Confidence 9999999994 5 47788888888 77888899999999 689999999999 999999743 3599999998763
Q ss_pred CceeEEEEEEEEEEeeC
Q 048392 211 ASFGVIIAWKIKLVTVP 227 (515)
Q Consensus 211 g~~Givt~~~~~l~~~~ 227 (515)
..-||||+++|||+|.+
T Consensus 157 ~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 157 PPGGIVTRVRLKLKERP 173 (268)
T ss_dssp STTCEEEEEEECCEECC
T ss_pred CCCceEEEEEEEEEeCC
Confidence 21149999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.79 E-value=3e-19 Score=168.18 Aligned_cols=116 Identities=20% Similarity=0.182 Sum_probs=99.0
Q ss_pred EEEcCCCCEEEEcCCCCHHHHHHHHHHhCCcceecC--CCCCcccchhhhhCCCCCCcccccccccceEeEEEEEecCCc
Q 048392 113 VSVDPEAKTAWVQAGATNGKVYHTIAEKSKTLAFPA--GVCPTVGVGGLFSGGGYGFLMRKYGLAADNVVDAHLIDVNGR 190 (515)
Q Consensus 113 v~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~--g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~ 190 (515)
|++|+++.+|+|+||+++.+|+++|.++| +.++. |+++. +|||++++|++| .+||.. |+|++++||++||+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~G--l~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTG--LFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTT--EECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcC--CEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 46889999999999999999999998884 55554 54555 999999999988 899999 99999999999999
Q ss_pred EEe-cC-----CCCcchhhhhhcccCCceeEEEEEEEEEEeeCceEEEEEEe
Q 048392 191 LLD-RK-----SMGEDLFWAIRGGGGASFGVIIAWKIKLVTVPEIVTAFTVN 236 (515)
Q Consensus 191 ~~~-~~-----~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~~~~~~~~~~~ 236 (515)
+++ .. ..++||||+++|+. |+|||||+++||++|.++....+.+.
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EEEECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 986 21 34689999999887 89999999999999998866554443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.25 E-value=2.3e-06 Score=83.77 Aligned_cols=154 Identities=16% Similarity=0.132 Sum_probs=101.5
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC--CcccCCCCCEEEEEcCC---CCcEEEcCCCCEEEEcCC
Q 048392 53 KPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGL--SYVSNYHVPFVIIDFIN---LSSVSVDPEAKTAWVQAG 127 (515)
Q Consensus 53 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~--~~~~~~~~~gvvIdl~~---l~~v~~d~~~~~v~v~aG 127 (515)
.+-.++.|+|.+|+.++++.. +.+..+.|||++.... .... ..+++||+++ |+.|+.+ ++.+++|||
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~---~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~ 75 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFA---QPEHLIDINRIPELRGIREE--GSTVVIGAM 75 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSC---CCSEEEECTTCGGGCCEEEE--TTEEEEETT
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCC---CCCEEEECCCChhhcceEec--CCEEEEccC
Confidence 455689999999999998753 3679999999996432 1111 1369999984 6777763 457999999
Q ss_pred CCHHHHHHH-HHHhCC-ccee----cCCC--CCcccchhhhhCCCCCCcccccccccceEe-------EEEEEecCCcEE
Q 048392 128 ATNGKVYHT-IAEKSK-TLAF----PAGV--CPTVGVGGLFSGGGYGFLMRKYGLAADNVV-------DAHLIDVNGRLL 192 (515)
Q Consensus 128 ~~~~~l~~~-l~~~g~-~l~~----~~g~--~~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vv~~~G~~~ 192 (515)
+++.+|.+. +.+.+. +|.. ..|. -+..+|||.+..+.. ..|.+. .+++..++| ..
T Consensus 76 ~tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G-~r 145 (287)
T 1ffv_C 76 TVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNG-RR 145 (287)
T ss_dssp CBHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTE-EE
T ss_pred CcHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCc-eE
Confidence 999999963 333322 2211 1221 124679998887642 345443 688889999 33
Q ss_pred ecCCCCcchhhhhhcccCCceeEEEEEEEEEEee
Q 048392 193 DRKSMGEDLFWAIRGGGGASFGVIIAWKIKLVTV 226 (515)
Q Consensus 193 ~~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~~ 226 (515)
+... .|+|..+|-.....-.|||+++|.+.+.
T Consensus 146 ~i~~--~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 146 TVPA--DGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp EEES--TTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EEEH--HHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 3222 3888888743222225999999987653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.59 E-value=8.5e-05 Score=72.61 Aligned_cols=154 Identities=16% Similarity=0.097 Sum_probs=95.3
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC-CcccCCCCCEEEEEcCC---CCcEEEcCCCCEEEEcCCC
Q 048392 53 KPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGL-SYVSNYHVPFVIIDFIN---LSSVSVDPEAKTAWVQAGA 128 (515)
Q Consensus 53 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~-~~~~~~~~~gvvIdl~~---l~~v~~d~~~~~v~v~aG~ 128 (515)
.+-.+++|+|.+|+.++++.. +-+..+.+|||++... ..... ...++||+++ |+.|+. +++.+++||++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~--~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~ 76 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLA--TPEHLVDLRDIGDLVGIRE--EGTDVVIGAMT 76 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSC--CCSEEEECTTCGGGSCEEE--ETTEEEEETTC
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCC--CCCEEEECCCChhhcceEe--cCCEEEEccCC
Confidence 455679999999999988643 3468999999995421 11111 1369999986 566765 45689999999
Q ss_pred CHHHHHH--HHHHhCCcceec---CCCC---CcccchhhhhCCCCCCcccccccccceEe-------EEEEEecCCcEEe
Q 048392 129 TNGKVYH--TIAEKSKTLAFP---AGVC---PTVGVGGLFSGGGYGFLMRKYGLAADNVV-------DAHLIDVNGRLLD 193 (515)
Q Consensus 129 ~~~~l~~--~l~~~g~~l~~~---~g~~---~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vv~~~G~~~~ 193 (515)
++.+|.+ .+.+.-..|.-. .++. +..+|||.+..+. ...|.+. .+++..++|+...
T Consensus 77 t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r~v 147 (288)
T 1n62_C 77 TQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGARIV 147 (288)
T ss_dssp BHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEEEE
T ss_pred cHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccEEE
Confidence 9999995 444421111100 1111 2357999988763 2355543 6677788884322
Q ss_pred cCCCCcchhhhhhcccCCceeEEEEEEEEEEe
Q 048392 194 RKSMGEDLFWAIRGGGGASFGVIIAWKIKLVT 225 (515)
Q Consensus 194 ~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~~ 225 (515)
.- .|+|..++-.....--|||++.|...+
T Consensus 148 -~~--~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 148 -AA--RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp -EH--HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred -EH--HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 11 366666542111122599999987654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.37 E-value=7.5e-05 Score=77.61 Aligned_cols=151 Identities=13% Similarity=0.054 Sum_probs=98.6
Q ss_pred EEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC--CcccCCCCCEEEEEcCC---CCcEEEcCCCCEEEEcCCCCH
Q 048392 56 VIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGL--SYVSNYHVPFVIIDFIN---LSSVSVDPEAKTAWVQAGATN 130 (515)
Q Consensus 56 ~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~--~~~~~~~~~gvvIdl~~---l~~v~~d~~~~~v~v~aG~~~ 130 (515)
.+++|+|.+|+.++++.. . +..+.+||++.... .... ...++||+++ |+.|+.+ ++.++++||+++
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~---~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl 249 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALR---DLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTI 249 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCC---CCCSEEECTTCGGGSCEEEE--TTEEEEETTCBH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCC---CCCEEEEcCCChhhCcEEEc--CCEEEEccCCcH
Confidence 468999999999888752 2 57889999997542 1111 1368999987 6778764 457999999999
Q ss_pred HHHHHHHHHhCC-cc----eecCCC--CCcccchhhhhCCCCCCcccccccccceEe----EEEEEecCCcEEecCCCCc
Q 048392 131 GKVYHTIAEKSK-TL----AFPAGV--CPTVGVGGLFSGGGYGFLMRKYGLAADNVV----DAHLIDVNGRLLDRKSMGE 199 (515)
Q Consensus 131 ~~l~~~l~~~g~-~l----~~~~g~--~~~vgigG~~~ggg~g~~~~~~G~~~d~v~----~~~vv~~~G~~~~~~~~~~ 199 (515)
.+|.+.+.+ .. +| ....+. -+..+|||.+..+..+ +-....++ .+++..++|+ ++.. -.
T Consensus 250 ~~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~vp--~~ 319 (462)
T 2w3s_A 250 AALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRMP--LE 319 (462)
T ss_dssp HHHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCCB--GG
T ss_pred HHHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEEE--HH
Confidence 999987433 22 11 111111 1346799999887633 34445566 7888888883 2222 24
Q ss_pred chhhhhhcccCCceeEEEEEEEEEEe
Q 048392 200 DLFWAIRGGGGASFGVIIAWKIKLVT 225 (515)
Q Consensus 200 dL~~a~rg~~~g~~Givt~~~~~l~~ 225 (515)
|+|..+|-.....--||+++.|...+
T Consensus 320 dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 320 DFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp GGEEETTEESCCTTCEEEEEEEESCC
T ss_pred HhhcccccccCCCCcEEEEEEEecCC
Confidence 88877763221122599999987654
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.49 E-value=0.004 Score=61.19 Aligned_cols=154 Identities=10% Similarity=-0.028 Sum_probs=90.7
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC---CcccCCCCCEEEEEcCC---CCcEEEcCCCCEEEEcC
Q 048392 53 KPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGL---SYVSNYHVPFVIIDFIN---LSSVSVDPEAKTAWVQA 126 (515)
Q Consensus 53 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~---~~~~~~~~~gvvIdl~~---l~~v~~d~~~~~v~v~a 126 (515)
.+...++|+|.+|+.++++. +. ...+.+||++.... .... ...+||+++ |+.|+. +++.+++||
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~----~~~lIdl~~i~eL~~I~~--~~~~l~IGA 78 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQL----FPMIICPAWIPELNAVEH--GPEGISFGA 78 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCC----CSEEEECTTCGGGGCEEE--CSSEEEEET
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCC----CCEEEECCCChhhcceEE--CCCeEEEcc
Confidence 56678999999999887753 22 35888999996421 1111 258999986 455665 456899999
Q ss_pred CCCHHHHHHHHHHh----C---C----cce--ec-CCC---CCcccchhhhhCCCCCCcccccccccceEe----EEEEE
Q 048392 127 GATNGKVYHTIAEK----S---K----TLA--FP-AGV---CPTVGVGGLFSGGGYGFLMRKYGLAADNVV----DAHLI 185 (515)
Q Consensus 127 G~~~~~l~~~l~~~----g---~----~l~--~~-~g~---~~~vgigG~~~ggg~g~~~~~~G~~~d~v~----~~~vv 185 (515)
++++.++.+.+.+. . . .|. +. .++ -+..+|||.+..+... +-..--++ .+++.
T Consensus 79 ~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~------sD~~~~L~AldA~v~l~ 152 (305)
T 3nvz_B 79 ACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI------SDLNPVFMASGTKLTIV 152 (305)
T ss_dssp TCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTT------CSSHHHHHHHTCEEEEE
T ss_pred CCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCc------hHHHHHHHHcCCEEEEE
Confidence 99999999876531 0 0 000 00 111 1356799988776431 11111222 56777
Q ss_pred ecCCcEEecCCCCcchhhhhhcccCCceeEEEEEEEEEE
Q 048392 186 DVNGRLLDRKSMGEDLFWAIRGGGGASFGVIIAWKIKLV 224 (515)
Q Consensus 186 ~~~G~~~~~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~ 224 (515)
.++|+.... - ..|+|-+++--....--|||++.|...
T Consensus 153 ~~~G~R~vp-~-~~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 153 SRGTRRTVP-M-DHTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp ETTEEEEEE-C-CGGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred cCCCcEEEE-e-ehHhhcCcccccCCCCcEEEEEEecCC
Confidence 788853321 1 125665443211111149999988643
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.30 E-value=0.0058 Score=59.49 Aligned_cols=152 Identities=16% Similarity=0.086 Sum_probs=90.5
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCC-cccCCCCCEEEEEcCC---CCcEEEcCCCCEEEEcCCC
Q 048392 53 KPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLS-YVSNYHVPFVIIDFIN---LSSVSVDPEAKTAWVQAGA 128 (515)
Q Consensus 53 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~-~~~~~~~~gvvIdl~~---l~~v~~d~~~~~v~v~aG~ 128 (515)
.|--+++|+|.+|+.++++. +-...+.+||+++...- .... ....+||+++ |+.|+. +++.+++||++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~--~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~v 75 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLV--YPSCLVDLRNVSELFEISQ--SAGILSVGAMV 75 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCC--CCSEEEECTTCGGGGCEEE--ETTEEEEETTC
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCC--CCCEEEECCCChhhcCeEE--cCCEEEEcCCC
Confidence 45567999999999988863 23468899999953210 0001 1258999987 456655 45689999999
Q ss_pred CHHHHHH--HHHHhCCccee--c-CCC---CCcccchhhhhCCCCCCcccccccccceEe-------EEEEEecCCcEEe
Q 048392 129 TNGKVYH--TIAEKSKTLAF--P-AGV---CPTVGVGGLFSGGGYGFLMRKYGLAADNVV-------DAHLIDVNGRLLD 193 (515)
Q Consensus 129 ~~~~l~~--~l~~~g~~l~~--~-~g~---~~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vv~~~G~~~~ 193 (515)
++.+|.+ .+.++-..|.- . .|+ -+..++||.+..+-. ..|... .+++..++|+...
T Consensus 76 t~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p---------~sD~~~~L~Al~A~v~l~~~~g~R~v 146 (288)
T 1t3q_C 76 THFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHADA---------GAEMPFLMATLGATMYIASSAGVRSV 146 (288)
T ss_dssp BHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCT---------TCHHHHHHHHTTCEEEEEETTEEEEE
T ss_pred cHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCCC---------cHHHHHHHHHcCcEEEEEcCCceEEE
Confidence 9999986 34332111100 0 122 134578998875421 355554 6777778885332
Q ss_pred cCCCCcchhhhhhcccCCceeEEEEEEEEEE
Q 048392 194 RKSMGEDLFWAIRGGGGASFGVIIAWKIKLV 224 (515)
Q Consensus 194 ~~~~~~dL~~a~rg~~~g~~Givt~~~~~l~ 224 (515)
. - .|+|..++--....--|||++.|...
T Consensus 147 p-~--~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 147 S-A--TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp E-H--HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred E-H--HHHhcCcccccCCCCCEEEEEEecCC
Confidence 1 1 25554443111112258999988643
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=92.91 E-value=0.19 Score=48.79 Aligned_cols=75 Identities=20% Similarity=0.188 Sum_probs=52.3
Q ss_pred ccEEEecCCHHHHHHHHHHHHhCCC-eEEEEcCCCCCCCC-CcccCCCCCEEEEEcCCC---CcEEEcCCCCEEEEcCCC
Q 048392 54 PQVIVTPVKESHVQAAVKCSQKYGL-QVRVRSGGHDYEGL-SYVSNYHVPFVIIDFINL---SSVSVDPEAKTAWVQAGA 128 (515)
Q Consensus 54 p~~vv~p~~~~dv~~~v~~a~~~~~-~~~~~g~Gh~~~~~-~~~~~~~~~gvvIdl~~l---~~v~~d~~~~~v~v~aG~ 128 (515)
|--.++|+|.+|+.++++ +++- ...+.+||+++... ..... ....+||++++ +.|+. +++.+++||++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~--~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~v 75 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWE--KPDVVIDIKKLKELEYIRV--EENTIHIGALS 75 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSC--CCSEEEECTTCGGGCCEEE--CSSEEEEETTC
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCC--CCCeEEEcccChhhcceEE--cCCeEEEccCC
Confidence 345789999999887764 3332 46888999996421 11110 13589999875 45554 46789999999
Q ss_pred CHHHHHH
Q 048392 129 TNGKVYH 135 (515)
Q Consensus 129 ~~~~l~~ 135 (515)
++.+|.+
T Consensus 76 t~~~l~~ 82 (296)
T 3hrd_C 76 TFTQIEN 82 (296)
T ss_dssp BHHHHHH
T ss_pred cHHHHHh
Confidence 9999974
No 35
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=87.46 E-value=0.99 Score=48.94 Aligned_cols=30 Identities=37% Similarity=0.527 Sum_probs=25.7
Q ss_pred hhHhhhhc-ccHHHHHHhhhccCCCCCcccC
Q 048392 472 IWGLKYFK-NNFKRLVDVKTMVDPGNFFRNE 501 (515)
Q Consensus 472 ~~~~~yyG-~n~~RL~~IK~kyDP~nvF~~~ 501 (515)
.|...+|| ..++.+++||+.|||+|+|+-.
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNPG 655 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGNR 655 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCCC
Confidence 67777887 4799999999999999999753
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=87.28 E-value=0.62 Score=45.73 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=52.9
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC-CcccCCCCCEEEEEcCCC---CcEEEcCCCCEEEEcCCC
Q 048392 53 KPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGL-SYVSNYHVPFVIIDFINL---SSVSVDPEAKTAWVQAGA 128 (515)
Q Consensus 53 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~-~~~~~~~~~gvvIdl~~l---~~v~~d~~~~~v~v~aG~ 128 (515)
.|-.++.|+|.+|+.++++. -.-.+.+||+++... -.... ....+||++++ +.|+.++ ++.+++||++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~~-----~~a~~lAGGT~l~~~~k~~~~--~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~v 76 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALAA-----EATLPLGAGTDLLPNLRRGLG--HPAALVDLTGIDGLATISTLA-DGSLRIGAGA 76 (324)
T ss_dssp CCCEEECCSSHHHHHHHTTS-----TTEEEESSCTTHHHHHHTTSC--CCSEEEECTTSTTTTCEEECT-TSCEEEETTC
T ss_pred CceEEEccCCHHHHHHHHhC-----CCCEEEECchhHHHHHhccCC--CCCEEEECCCChhhcceEECC-CCeEEEccCC
Confidence 34457999999999888762 247889999996321 01101 13689999875 6666532 3469999999
Q ss_pred CHHHHHHH
Q 048392 129 TNGKVYHT 136 (515)
Q Consensus 129 ~~~~l~~~ 136 (515)
++.+|.+.
T Consensus 77 t~~~l~~~ 84 (324)
T 1rm6_B 77 TLEAIAEH 84 (324)
T ss_dssp BHHHHHHC
T ss_pred cHHHHHhC
Confidence 99999864
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=72.64 E-value=3.2 Score=48.52 Aligned_cols=78 Identities=9% Similarity=-0.020 Sum_probs=54.1
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCC-cccCCCCCEEEEEcCCC---CcEEEcCCCCEEEEcCCC
Q 048392 53 KPQVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLS-YVSNYHVPFVIIDFINL---SSVSVDPEAKTAWVQAGA 128 (515)
Q Consensus 53 ~p~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~-~~~~~~~~gvvIdl~~l---~~v~~d~~~~~v~v~aG~ 128 (515)
.+...++|.|.+|+.++++. + -.-.+.+||+++...- .... ....+||++++ +.|+. +++.+++||++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k~~~~--~~~~lIdl~~i~EL~~I~~--~~~~l~IGA~v 303 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMKFKNQ--LFPMIICPAWIPELNAVEH--GPEGISFGAAC 303 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHHHSCC--CCSEEEECTTCGGGGCEEE--CSSEEEEETTC
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhhcCCC--CCCeEEEcCCCHHhCceEE--eCCEEEEEecC
Confidence 45668999999999887653 2 1247789999853211 0000 12588999875 55655 45689999999
Q ss_pred CHHHHHHHHH
Q 048392 129 TNGKVYHTIA 138 (515)
Q Consensus 129 ~~~~l~~~l~ 138 (515)
++.+|.+.+.
T Consensus 304 tl~~l~~~l~ 313 (1332)
T 3unc_A 304 ALSSVEKTLL 313 (1332)
T ss_dssp BHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9999998764
No 38
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=66.79 E-value=11 Score=39.77 Aligned_cols=26 Identities=19% Similarity=0.129 Sum_probs=21.9
Q ss_pred ccHHHHHHhhhccCCCCCcccCCCCC
Q 048392 480 NNFKRLVDVKTMVDPGNFFRNEQSIP 505 (515)
Q Consensus 480 ~n~~RL~~IK~kyDP~nvF~~~qsI~ 505 (515)
..++-+++||+.+||+|+|+-..-+.
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~~ 548 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSGV 548 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred HHHHHHHHHHHHcCccCCCCCCcccc
Confidence 46888899999999999998766554
No 39
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=57.47 E-value=5.3 Score=42.30 Aligned_cols=32 Identities=16% Similarity=0.078 Sum_probs=23.8
Q ss_pred hcccHHHHHHhhhccCCCCCcccCCCCCCCCcc
Q 048392 478 FKNNFKRLVDVKTMVDPGNFFRNEQSIPPLSSR 510 (515)
Q Consensus 478 yG~n~~RL~~IK~kyDP~nvF~~~qsI~~~~~~ 510 (515)
|++..+ |++||+.+||.|+|+-..-+.+-.|+
T Consensus 535 ~~~~~~-m~~iK~~~DP~~ilNPGk~~t~~~~~ 566 (571)
T 1f0x_A 535 YKAPET-LQKFYRENDPTNSMNPGIGKTSKRKN 566 (571)
T ss_dssp SCCCHH-HHHHHHHHCTTCCBSTTTTTCCCSSC
T ss_pred cCCHHH-HHHHHHHhCCCCCCCCCcCcCCcccc
Confidence 344444 99999999999999987666554443
No 40
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=56.07 E-value=12 Score=39.63 Aligned_cols=30 Identities=17% Similarity=0.346 Sum_probs=19.3
Q ss_pred hhHhhhhc-ccHHHHHHhhhccCCCCCcccC
Q 048392 472 IWGLKYFK-NNFKRLVDVKTMVDPGNFFRNE 501 (515)
Q Consensus 472 ~~~~~yyG-~n~~RL~~IK~kyDP~nvF~~~ 501 (515)
.|....+| ..++=+++||+.+||+|+|+-.
T Consensus 551 ~~l~~~~g~~~~~lmr~iK~a~DP~gIlNPG 581 (584)
T 2uuu_A 551 PWMTRYATRGWINVYRSLKETIDPKDICNPR 581 (584)
T ss_dssp --------CTHHHHHHHHHHHHCTTCCBSCC
T ss_pred HHHHHhcCHHHHHHHHHHHHHcCCCcCCCCC
Confidence 46666666 4789999999999999999753
No 41
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=47.07 E-value=7.3 Score=41.18 Aligned_cols=23 Identities=22% Similarity=0.322 Sum_probs=21.1
Q ss_pred ccHHHHHHhhhccCCCCCcccCC
Q 048392 480 NNFKRLVDVKTMVDPGNFFRNEQ 502 (515)
Q Consensus 480 ~n~~RL~~IK~kyDP~nvF~~~q 502 (515)
.++++.+++++++||+++|.++.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~~ 555 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNGF 555 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCHH
T ss_pred CCHHHHHHHHHhcCCCCccCCHH
Confidence 89999999999999999998653
No 42
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=39.15 E-value=16 Score=42.92 Aligned_cols=78 Identities=9% Similarity=-0.019 Sum_probs=49.4
Q ss_pred cEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCC--CCCcccCCCCCEEEEEcCCCCcE-EEcCCCCEEEEcCCCCHH
Q 048392 55 QVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYE--GLSYVSNYHVPFVIIDFINLSSV-SVDPEAKTAWVQAGATNG 131 (515)
Q Consensus 55 ~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~--~~~~~~~~~~~gvvIdl~~l~~v-~~d~~~~~v~v~aG~~~~ 131 (515)
...+.|.|.+|+.++..- .-+.+ +..|++... -..... +-.++|++++...+ .+..++..+++||++++.
T Consensus 241 ~~w~~P~tl~el~~l~~~--~p~a~--lvaGnT~~gl~~~~~~~---~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls 313 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMK--HPSAP--LVIGNTYLGLHMKFTDV---SYPIIISPARILELFVVTNTKQGLTLGTGLSLT 313 (1335)
T ss_dssp CEEEECSSHHHHHHHHHH--CTTSC--BCSSCTTHHHHHC--CC---CCSEEECCTTCGGGSCEECCTTEEEEETTCBHH
T ss_pred ceEecCCCHHHHHHHHHH--CCCCe--EEEecccceeeEeecCC---CCCeEEEcCcchhHheEEecCCEEEEcccCcHH
Confidence 346899999999887542 11233 445665531 111111 12488998765443 344566789999999999
Q ss_pred HHHHHHHH
Q 048392 132 KVYHTIAE 139 (515)
Q Consensus 132 ~l~~~l~~ 139 (515)
++.+.|.+
T Consensus 314 ~~~~~l~~ 321 (1335)
T 3zyv_A 314 QVKNVLSD 321 (1335)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888765
No 43
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=37.66 E-value=52 Score=26.88 Aligned_cols=38 Identities=21% Similarity=0.259 Sum_probs=33.2
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCCC
Q 048392 51 TPKPQVIVTPVKESHVQAAVKCSQKYGLQV-RVRSGGHD 88 (515)
Q Consensus 51 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh~ 88 (515)
...|..|+++.+++++.++.+.|++.|+|. .++=.|+.
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 468999999999999999999999999997 56667764
No 44
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=37.39 E-value=11 Score=39.46 Aligned_cols=23 Identities=17% Similarity=0.262 Sum_probs=21.2
Q ss_pred cccHHHHHHhhhccCCCCCcccC
Q 048392 479 KNNFKRLVDVKTMVDPGNFFRNE 501 (515)
Q Consensus 479 G~n~~RL~~IK~kyDP~nvF~~~ 501 (515)
|+++..-++++.++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 68999999999999999999864
No 45
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=35.65 E-value=58 Score=26.51 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=34.9
Q ss_pred CCCCCCCCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCCC
Q 048392 45 RFSTPTTPKPQVIVTPVKESHVQAAVKCSQKYGLQV-RVRSGGHD 88 (515)
Q Consensus 45 r~~~~~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh~ 88 (515)
+|.. ...|..|+.+.+++++.++.+.|++.|+|. .++=.|+.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 4642 469999999999999999999999999997 56667763
No 46
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=34.92 E-value=58 Score=26.70 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=33.1
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCCC
Q 048392 51 TPKPQVIVTPVKESHVQAAVKCSQKYGLQV-RVRSGGHD 88 (515)
Q Consensus 51 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh~ 88 (515)
...+..|+.+.+++++.++.+.|++.|+|. .|+-.|+.
T Consensus 46 ~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 46 EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 358999999999999999999999999996 56677765
No 47
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=33.91 E-value=55 Score=26.51 Aligned_cols=39 Identities=10% Similarity=0.174 Sum_probs=33.5
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCCC
Q 048392 50 TTPKPQVIVTPVKESHVQAAVKCSQKYGLQV-RVRSGGHD 88 (515)
Q Consensus 50 ~~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh~ 88 (515)
....|..|+.+.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 48 ~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 48 DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 3569999999999999999999999999997 56666664
No 48
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=32.84 E-value=54 Score=26.50 Aligned_cols=38 Identities=21% Similarity=0.317 Sum_probs=31.4
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCCC
Q 048392 51 TPKPQVIVTPVKESHVQAAVKCSQKYGLQV-RVRSGGHD 88 (515)
Q Consensus 51 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh~ 88 (515)
...|..|+.+.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 569999999999999999999999999986 55556653
No 49
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=27.64 E-value=83 Score=25.43 Aligned_cols=37 Identities=24% Similarity=0.433 Sum_probs=31.9
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCeE-EEEcCCC
Q 048392 51 TPKPQVIVTPVKESHVQAAVKCSQKYGLQV-RVRSGGH 87 (515)
Q Consensus 51 ~~~p~~vv~p~~~~dv~~~v~~a~~~~~~~-~~~g~Gh 87 (515)
...|..+++..+++++.++.+.|++.|+|. .++=.|+
T Consensus 49 ~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 49 CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 457999999999999999999999999985 5566665
No 50
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=26.96 E-value=46 Score=25.14 Aligned_cols=72 Identities=11% Similarity=0.131 Sum_probs=57.6
Q ss_pred hhHHHHHHhhCCCCCCcccceEecCCCCCchhHHhhcccccCCCC---CCCCCccEEEecCCHHHHHHHHHHHHh
Q 048392 4 AHKFVQCLLENSEDSTSISKLIYTRTNSSFSSILDFSIQNLRFST---PTTPKPQVIVTPVKESHVQAAVKCSQK 75 (515)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~---~~~~~p~~vv~p~~~~dv~~~v~~a~~ 75 (515)
.++++..+.+...+.+.-...++....|++.+++.+...+..|+. +....=..+|.|++.++..++.+..++
T Consensus 7 ~~~l~~~~~~~v~si~~~~n~vVikT~PG~A~~vA~~iD~~~~~eIlGTIAGDDTIlvi~r~~~~a~~l~~~l~~ 81 (83)
T 2p5m_A 7 LSKLKRALMDAFVKIDSASHMIVLKTMPGNAQAIGALMDNLDWDEMMGTICGDDTILIICRTPEDTEGVKNRLLE 81 (83)
T ss_dssp HHHHHHHHHHHEEEEEEETTEEEEEESTTCHHHHHHHHHTTTCTTCCEEEECSSEEEEECSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHEEEEEecCCEEEEEeCCCcHHHHHHHHHhCCCCCeEEEEecCCEEEEEECCHHHHHHHHHHHHH
Confidence 345888888877666666778888889999999988888888877 455678899999999999998876543
No 51
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=22.50 E-value=1.4e+02 Score=25.46 Aligned_cols=41 Identities=20% Similarity=0.272 Sum_probs=34.1
Q ss_pred cEEEecCCHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCcc
Q 048392 55 QVIVTPVKESHVQAAVKCSQKYGLQVRVRSGGHDYEGLSYV 95 (515)
Q Consensus 55 ~~vv~p~~~~dv~~~v~~a~~~~~~~~~~g~Gh~~~~~~~~ 95 (515)
...+.|.+.+++.++++.+.+.+.-+.+..||.+....+..
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~t 87 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQT 87 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCCH
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcCh
Confidence 45788999999999999998766789999999987655543
No 52
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=21.54 E-value=42 Score=20.10 Aligned_cols=20 Identities=15% Similarity=0.320 Sum_probs=16.2
Q ss_pred hhcccHHHHHHhhhccCCCC
Q 048392 477 YFKNNFKRLVDVKTMVDPGN 496 (515)
Q Consensus 477 yyG~n~~RL~~IK~kyDP~n 496 (515)
-|.+.++|-+||-+|.+++.
T Consensus 9 aFadA~~RaRQIaAKig~~~ 28 (31)
T 2kxh_B 9 AFKDALQRARQIAAKIGGDA 28 (31)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHhcCCC
Confidence 34568999999999998764
No 53
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=21.27 E-value=47 Score=24.82 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=56.3
Q ss_pred hHHHHHHhhCCCCCCcccceEecCCCCCchhHHhhcccccCCCC---CCCCCccEEEecCCHHHHHHHHHHHHh
Q 048392 5 HKFVQCLLENSEDSTSISKLIYTRTNSSFSSILDFSIQNLRFST---PTTPKPQVIVTPVKESHVQAAVKCSQK 75 (515)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~---~~~~~p~~vv~p~~~~dv~~~v~~a~~ 75 (515)
++|+..+.+...+.+.-...|+....|++.+++.+...+..|+. +....=..+|.|++.++..++.+..++
T Consensus 4 ~~l~~~~~~~v~si~~~~n~vVikT~PG~A~~vA~~iD~~~~~eIlGTIAGDDTIlvi~r~~~~a~~l~~~l~~ 77 (79)
T 2zfz_A 4 DRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMFEN 77 (79)
T ss_dssp HHHHHHHHHHCCEEEEETTEEEEECSTTCHHHHHHHHHHHCCTTEEEEEECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHEEEEeecCCEEEEEeCCCcHHHHHHHHHhCCCCCeEEEEecCCEEEEEECCHHHHHHHHHHHHh
Confidence 35778888877776666778888999999999988888888876 455677888999999888887776543
No 54
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=20.32 E-value=1.7e+02 Score=25.10 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=33.2
Q ss_pred cEEEecCCHHHHHHHHHHHHhC-CCeEEEEcCCCCCCCCCc
Q 048392 55 QVIVTPVKESHVQAAVKCSQKY-GLQVRVRSGGHDYEGLSY 94 (515)
Q Consensus 55 ~~vv~p~~~~dv~~~v~~a~~~-~~~~~~~g~Gh~~~~~~~ 94 (515)
...+.|.+.+++.++|+.+.+. +.-+.+..||.+....+.
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~ 86 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQ 86 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCC
Confidence 4568899999999999998876 578999999998765444
No 55
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.17 E-value=1.5e+02 Score=22.45 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=23.9
Q ss_pred cEEEcCCCCEEEEcCCCCHHHHHHHHHHhCCc
Q 048392 112 SVSVDPEAKTAWVQAGATNGKVYHTIAEKSKT 143 (515)
Q Consensus 112 ~v~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~ 143 (515)
.+++|...+.++|..-+...++.+.+.+.|+.
T Consensus 48 ~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~ 79 (98)
T 2crl_A 48 DVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQ 79 (98)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTTSC
T ss_pred EEEEECCCCEEEEEEeCCHHHHHHHHHHhCCc
Confidence 34566667777777667888999999888764
No 56
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=20.01 E-value=29 Score=24.07 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEc
Q 048392 63 ESHVQAAVKCSQKYGLQVRVRS 84 (515)
Q Consensus 63 ~~dv~~~v~~a~~~~~~~~~~g 84 (515)
.++..++-.||+++|++|.-||
T Consensus 12 ~~~~~aIR~WAr~nG~~VsdRG 33 (55)
T 2kng_A 12 REQSAAIREWARRNGHNVSTRG 33 (55)
T ss_dssp STHHHHHHHHHHHTTCCCCSSS
T ss_pred ccChHHHHHHHHHcCCcCCCCC
Confidence 3367888999999999988776
Done!