Query 048393
Match_columns 369
No_of_seqs 167 out of 1701
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 09:06:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048393.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048393hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02555 limonoid glucosyltran 100.0 4.8E-57 1E-61 432.8 38.2 353 9-369 87-454 (480)
2 PLN02173 UDP-glucosyl transfer 100.0 2.1E-56 4.6E-61 425.0 37.4 353 8-369 74-433 (449)
3 PLN02210 UDP-glucosyl transfer 100.0 1.8E-55 3.8E-60 421.9 37.8 357 8-369 78-440 (456)
4 PLN03004 UDP-glycosyltransfera 100.0 1.7E-55 3.6E-60 419.1 36.5 344 9-369 84-446 (451)
5 PLN02410 UDP-glucoronosyl/UDP- 100.0 2.1E-55 4.5E-60 419.9 36.5 341 10-369 76-435 (451)
6 PLN02152 indole-3-acetate beta 100.0 3.8E-55 8.1E-60 417.1 36.3 348 8-369 76-441 (455)
7 PLN03015 UDP-glucosyl transfer 100.0 8.2E-55 1.8E-59 414.1 36.2 343 9-369 81-453 (470)
8 PLN02992 coniferyl-alcohol glu 100.0 1.4E-54 3E-59 414.8 36.8 341 9-369 78-454 (481)
9 PLN02207 UDP-glycosyltransfera 100.0 3.7E-54 7.9E-59 411.1 36.9 346 9-369 82-450 (468)
10 PLN00164 glucosyltransferase; 100.0 8.9E-54 1.9E-58 412.6 36.9 346 9-369 84-458 (480)
11 PLN02670 transferase, transfer 100.0 2.7E-53 5.8E-58 405.6 33.9 341 12-364 89-449 (472)
12 PLN02562 UDP-glycosyltransfera 100.0 7.4E-53 1.6E-57 403.3 36.2 343 9-369 75-434 (448)
13 PLN02863 UDP-glucoronosyl/UDP- 100.0 5.4E-53 1.2E-57 406.0 35.3 350 13-369 92-456 (477)
14 PLN02554 UDP-glycosyltransfera 100.0 3.9E-53 8.4E-58 409.5 34.3 342 9-369 82-463 (481)
15 PLN02534 UDP-glycosyltransfera 100.0 2.5E-52 5.5E-57 400.7 35.2 346 16-369 100-471 (491)
16 PLN02167 UDP-glycosyltransfera 100.0 2.2E-52 4.7E-57 403.8 34.4 340 13-369 88-457 (475)
17 PLN02764 glycosyltransferase f 100.0 6.9E-52 1.5E-56 392.9 35.0 327 13-364 88-429 (453)
18 PLN02448 UDP-glycosyltransfera 100.0 5.8E-51 1.3E-55 392.9 36.7 348 8-369 81-442 (459)
19 PLN03007 UDP-glucosyltransfera 100.0 5.1E-51 1.1E-55 395.2 36.0 342 18-369 107-465 (482)
20 PLN02208 glycosyltransferase f 100.0 6.9E-51 1.5E-55 387.9 34.1 321 14-362 88-421 (442)
21 PLN00414 glycosyltransferase f 100.0 1.4E-50 3E-55 386.2 33.8 324 14-369 88-426 (446)
22 PHA03392 egt ecdysteroid UDP-g 100.0 1.8E-42 4E-47 336.2 23.5 299 22-364 123-449 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 4.6E-43 9.9E-48 344.6 13.5 301 34-364 119-426 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 1.4E-34 3.1E-39 284.3 13.5 294 34-362 114-437 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 1.3E-31 2.9E-36 255.5 25.4 299 9-363 65-375 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 4.3E-29 9.4E-34 239.0 21.7 158 187-362 228-386 (401)
27 COG1819 Glycosyl transferases, 100.0 3.2E-28 7E-33 230.6 16.9 152 198-365 235-386 (406)
28 PRK12446 undecaprenyldiphospho 99.8 6.2E-18 1.3E-22 158.3 21.2 149 195-357 180-336 (352)
29 PF13528 Glyco_trans_1_3: Glyc 99.8 2E-17 4.2E-22 153.5 19.0 122 199-341 191-317 (318)
30 COG0707 MurG UDP-N-acetylgluco 99.8 5.7E-17 1.2E-21 150.4 18.4 149 199-357 182-338 (357)
31 TIGR00661 MJ1255 conserved hyp 99.7 1.3E-15 2.9E-20 141.3 18.7 125 199-345 187-315 (321)
32 PF04101 Glyco_tran_28_C: Glyc 99.7 1.2E-17 2.5E-22 140.1 0.1 137 202-345 1-145 (167)
33 cd03785 GT1_MurG MurG is an N- 99.5 2.2E-12 4.7E-17 121.2 22.5 154 198-358 179-339 (350)
34 PRK13608 diacylglycerol glucos 99.5 3.3E-12 7.1E-17 121.8 21.7 147 198-358 200-353 (391)
35 PLN02605 monogalactosyldiacylg 99.5 1.3E-11 2.9E-16 117.4 24.4 158 188-357 194-362 (382)
36 PRK00726 murG undecaprenyldiph 99.5 5.1E-12 1.1E-16 119.1 20.0 149 199-357 182-338 (357)
37 PRK13609 diacylglycerol glucos 99.5 1.1E-11 2.4E-16 117.9 22.3 147 198-357 200-352 (380)
38 TIGR01133 murG undecaprenyldip 99.3 1.7E-10 3.7E-15 108.2 18.6 89 263-357 243-335 (348)
39 TIGR00215 lpxB lipid-A-disacch 99.3 1E-10 2.2E-15 111.2 15.2 159 194-361 185-369 (385)
40 TIGR03492 conserved hypothetic 99.2 2.2E-09 4.7E-14 102.3 20.2 139 199-346 204-366 (396)
41 TIGR03590 PseG pseudaminic aci 99.2 9.2E-10 2E-14 99.9 14.6 103 201-310 171-278 (279)
42 PRK00025 lpxB lipid-A-disaccha 99.0 6.8E-09 1.5E-13 98.7 15.3 156 194-359 180-357 (380)
43 cd03814 GT1_like_2 This family 98.8 1.1E-06 2.4E-11 82.0 22.8 141 200-357 196-346 (364)
44 COG4671 Predicted glycosyl tra 98.7 1.2E-07 2.6E-12 85.3 10.7 135 198-343 217-364 (400)
45 cd05844 GT1_like_7 Glycosyltra 98.7 1.4E-06 3E-11 82.1 18.6 93 253-357 244-350 (367)
46 PRK05749 3-deoxy-D-manno-octul 98.6 1.4E-05 3.1E-10 77.2 22.9 96 256-361 304-406 (425)
47 PLN02871 UDP-sulfoquinovose:DA 98.6 1.6E-05 3.4E-10 77.8 23.3 139 202-358 264-415 (465)
48 cd03800 GT1_Sucrose_synthase T 98.6 8.6E-05 1.9E-09 70.6 27.3 94 253-358 282-383 (398)
49 cd03823 GT1_ExpE7_like This fa 98.6 2.4E-05 5.3E-10 72.7 22.9 144 199-356 189-342 (359)
50 cd03794 GT1_wbuB_like This fam 98.5 3.3E-05 7.2E-10 72.4 22.7 148 199-359 218-381 (394)
51 PRK14089 ipid-A-disaccharide s 98.5 5.5E-06 1.2E-10 77.1 16.8 88 265-361 230-332 (347)
52 cd03786 GT1_UDP-GlcNAc_2-Epime 98.5 7.9E-06 1.7E-10 77.0 18.1 133 199-345 197-338 (363)
53 cd03808 GT1_cap1E_like This fa 98.5 5.8E-05 1.3E-09 69.8 23.3 146 199-357 186-343 (359)
54 KOG3349 Predicted glycosyltran 98.5 8.8E-07 1.9E-11 69.8 8.5 116 202-321 5-132 (170)
55 cd03817 GT1_UGDG_like This fam 98.5 6.7E-05 1.4E-09 70.0 23.0 149 200-361 201-361 (374)
56 cd03795 GT1_like_4 This family 98.4 3.8E-05 8.2E-10 71.8 19.5 147 200-358 190-347 (357)
57 cd03801 GT1_YqgM_like This fam 98.4 8E-05 1.7E-09 69.0 21.1 92 252-355 254-353 (374)
58 cd03820 GT1_amsD_like This fam 98.4 9.3E-05 2E-09 68.1 21.4 147 201-360 178-336 (348)
59 TIGR00236 wecB UDP-N-acetylglu 98.4 5E-05 1.1E-09 71.8 19.4 129 200-345 197-335 (365)
60 cd03818 GT1_ExpC_like This fam 98.4 0.00023 5E-09 68.1 24.1 96 254-359 281-382 (396)
61 cd04962 GT1_like_5 This family 98.3 0.00024 5.1E-09 67.0 23.2 146 200-357 196-350 (371)
62 cd03822 GT1_ecORF704_like This 98.3 0.0003 6.4E-09 65.7 23.4 94 253-359 246-350 (366)
63 TIGR03449 mycothiol_MshA UDP-N 98.3 0.00052 1.1E-08 65.7 25.3 94 253-358 282-383 (405)
64 cd03799 GT1_amsK_like This is 98.3 0.00017 3.8E-09 67.2 21.6 144 200-357 178-341 (355)
65 cd03804 GT1_wbaZ_like This fam 98.3 2.8E-05 6E-10 73.0 15.9 139 203-357 197-341 (351)
66 PF02684 LpxB: Lipid-A-disacch 98.3 0.00015 3.2E-09 68.1 20.3 203 138-366 140-359 (373)
67 cd03816 GT1_ALG1_like This fam 98.3 0.00043 9.4E-09 66.7 24.2 90 255-358 295-399 (415)
68 cd04949 GT1_gtfA_like This fam 98.3 9.2E-05 2E-09 70.0 19.1 100 254-362 261-364 (372)
69 cd03798 GT1_wlbH_like This fam 98.2 0.00078 1.7E-08 62.5 24.0 135 200-346 201-346 (377)
70 cd03819 GT1_WavL_like This fam 98.2 0.0011 2.4E-08 61.8 24.9 150 199-359 183-347 (355)
71 cd03825 GT1_wcfI_like This fam 98.2 0.0016 3.4E-08 61.0 25.4 93 254-358 244-345 (365)
72 PRK10307 putative glycosyl tra 98.2 0.0015 3.4E-08 62.7 25.4 146 200-358 228-388 (412)
73 PRK01021 lpxB lipid-A-disaccha 98.2 0.00053 1.1E-08 67.5 21.9 199 138-361 368-589 (608)
74 PF00534 Glycos_transf_1: Glyc 98.2 2.5E-05 5.4E-10 65.3 11.3 146 198-355 12-170 (172)
75 PRK09922 UDP-D-galactose:(gluc 98.1 7.8E-05 1.7E-09 70.3 15.3 147 201-360 180-343 (359)
76 cd03813 GT1_like_3 This family 98.1 0.00089 1.9E-08 65.7 23.0 94 253-357 353-456 (475)
77 COG1519 KdtA 3-deoxy-D-manno-o 98.1 0.0038 8.2E-08 58.5 24.9 103 255-366 301-409 (419)
78 TIGR03088 stp2 sugar transfera 98.1 0.001 2.2E-08 62.9 21.1 92 254-357 255-352 (374)
79 cd03811 GT1_WabH_like This fam 98.1 0.00085 1.8E-08 61.7 20.2 133 199-345 187-333 (353)
80 cd03821 GT1_Bme6_like This fam 98.1 0.0018 3.9E-08 60.3 22.5 91 253-357 261-359 (375)
81 TIGR02472 sucr_P_syn_N sucrose 98.0 0.0018 3.9E-08 62.9 22.9 92 253-356 316-419 (439)
82 TIGR02918 accessory Sec system 98.0 0.0014 3E-08 64.6 21.9 102 253-361 375-484 (500)
83 TIGR03087 stp1 sugar transfera 98.0 0.0011 2.3E-08 63.5 20.8 91 254-358 280-377 (397)
84 TIGR02468 sucrsPsyn_pln sucros 98.0 0.0011 2.4E-08 69.4 21.8 96 254-359 548-653 (1050)
85 cd03807 GT1_WbnK_like This fam 98.0 0.0031 6.8E-08 58.4 23.4 89 254-356 251-345 (365)
86 PRK15179 Vi polysaccharide bio 98.0 0.002 4.3E-08 65.6 23.1 96 253-358 573-674 (694)
87 PF02350 Epimerase_2: UDP-N-ac 98.0 0.00048 1E-08 64.5 16.6 131 198-345 178-319 (346)
88 cd03805 GT1_ALG2_like This fam 98.0 0.0019 4.1E-08 61.4 21.0 92 253-357 279-378 (392)
89 cd03812 GT1_CapH_like This fam 98.0 0.0023 5.1E-08 59.7 21.3 134 199-346 190-333 (358)
90 COG5017 Uncharacterized conser 97.9 0.00018 3.9E-09 56.0 9.8 109 203-323 2-123 (161)
91 PRK15427 colanic acid biosynth 97.8 0.00024 5.1E-09 68.3 12.8 93 253-357 278-385 (406)
92 cd04946 GT1_AmsK_like This fam 97.8 0.00079 1.7E-08 64.7 15.8 150 200-358 229-392 (407)
93 COG3980 spsG Spore coat polysa 97.8 0.00027 5.8E-09 62.2 10.7 141 200-355 158-301 (318)
94 COG0763 LpxB Lipid A disacchar 97.7 0.0024 5.2E-08 59.1 16.1 203 139-363 144-364 (381)
95 PRK15484 lipopolysaccharide 1, 97.7 0.0019 4E-08 61.5 15.8 93 253-356 256-356 (380)
96 TIGR02470 sucr_synth sucrose s 97.7 0.061 1.3E-06 55.3 26.8 92 254-355 619-725 (784)
97 PF04007 DUF354: Protein of un 97.6 0.032 6.9E-07 51.8 22.7 126 199-342 178-308 (335)
98 PF13844 Glyco_transf_41: Glyc 97.6 0.00045 9.8E-09 66.3 10.4 137 198-345 282-431 (468)
99 cd03809 GT1_mtfB_like This fam 97.5 0.0009 1.9E-08 62.4 10.7 142 201-357 195-350 (365)
100 PF13692 Glyco_trans_1_4: Glyc 97.5 0.00031 6.8E-09 56.0 6.4 126 202-344 3-135 (135)
101 cd03796 GT1_PIG-A_like This fa 97.4 0.025 5.4E-07 54.1 20.2 130 200-345 192-334 (398)
102 cd04951 GT1_WbdM_like This fam 97.4 0.0018 3.9E-08 60.5 11.9 131 200-344 187-326 (360)
103 TIGR02149 glgA_Coryne glycogen 97.4 0.002 4.3E-08 61.2 12.1 148 201-357 201-366 (388)
104 cd03806 GT1_ALG11_like This fa 97.4 0.13 2.9E-06 49.6 24.5 96 253-361 304-411 (419)
105 TIGR03568 NeuC_NnaA UDP-N-acet 97.3 0.073 1.6E-06 50.3 21.5 128 199-343 200-338 (365)
106 PLN00142 sucrose synthase 97.2 0.25 5.3E-06 51.1 25.2 74 271-356 667-749 (815)
107 cd03802 GT1_AviGT4_like This f 96.9 0.0058 1.3E-07 56.4 9.9 129 202-345 172-309 (335)
108 PLN02949 transferase, transfer 96.9 0.51 1.1E-05 46.1 23.1 93 253-358 334-438 (463)
109 PHA01633 putative glycosyl tra 96.8 0.047 1E-06 50.7 14.5 101 253-361 200-324 (335)
110 PRK09814 beta-1,6-galactofuran 96.8 0.0074 1.6E-07 56.3 9.3 97 253-363 206-318 (333)
111 COG0381 WecB UDP-N-acetylgluco 96.7 0.51 1.1E-05 44.1 21.2 129 199-345 203-342 (383)
112 cd04955 GT1_like_6 This family 96.7 0.015 3.3E-07 54.3 10.5 136 203-357 195-344 (363)
113 cd03792 GT1_Trehalose_phosphor 96.6 0.061 1.3E-06 50.8 14.1 90 254-357 252-351 (372)
114 cd04950 GT1_like_1 Glycosyltra 96.5 0.091 2E-06 49.8 15.0 125 202-345 206-341 (373)
115 COG3914 Spy Predicted O-linked 96.5 0.032 7E-07 54.1 11.1 132 198-338 427-572 (620)
116 PLN02501 digalactosyldiacylgly 96.5 0.56 1.2E-05 47.5 19.9 75 256-345 603-682 (794)
117 PLN02275 transferase, transfer 96.4 0.033 7.1E-07 52.8 11.0 75 254-342 286-371 (371)
118 PLN02846 digalactosyldiacylgly 96.4 0.79 1.7E-05 44.6 20.1 73 258-345 288-364 (462)
119 PRK10017 colanic acid biosynth 96.1 0.11 2.4E-06 50.1 12.7 163 190-362 224-412 (426)
120 PRK15490 Vi polysaccharide bio 95.8 0.12 2.6E-06 51.1 11.5 65 253-324 454-523 (578)
121 KOG4626 O-linked N-acetylgluco 95.8 0.075 1.6E-06 52.1 9.8 122 198-323 756-889 (966)
122 cd03791 GT1_Glycogen_synthase_ 95.7 0.07 1.5E-06 52.3 10.0 134 200-343 295-441 (476)
123 TIGR02095 glgA glycogen/starch 95.6 0.065 1.4E-06 52.6 9.4 134 200-343 290-436 (473)
124 PRK14098 glycogen synthase; Pr 95.5 0.19 4.1E-06 49.5 12.0 130 201-342 307-449 (489)
125 TIGR03713 acc_sec_asp1 accesso 95.3 0.14 3E-06 50.7 10.2 92 254-362 409-507 (519)
126 PRK00654 glgA glycogen synthas 95.2 0.22 4.8E-06 48.8 11.2 134 200-343 281-427 (466)
127 COG4370 Uncharacterized protei 94.7 0.17 3.6E-06 45.5 8.0 95 260-363 301-409 (412)
128 PHA01630 putative group 1 glyc 94.2 0.6 1.3E-05 43.5 11.0 39 261-301 197-242 (331)
129 PF06722 DUF1205: Protein of u 93.9 0.094 2E-06 39.2 4.1 55 188-242 28-87 (97)
130 PRK10125 putative glycosyl tra 93.4 1.4 2.9E-05 42.4 12.2 100 218-339 258-366 (405)
131 TIGR02919 accessory Sec system 93.3 2.3 4.9E-05 41.3 13.5 172 124-345 234-412 (438)
132 PF13524 Glyco_trans_1_2: Glyc 93.2 0.54 1.2E-05 34.4 7.4 64 279-355 9-74 (92)
133 PLN02316 synthase/transferase 92.5 2.9 6.2E-05 44.7 13.8 83 254-344 900-998 (1036)
134 cd01635 Glycosyltransferase_GT 90.6 0.58 1.3E-05 39.9 5.7 49 253-303 160-216 (229)
135 TIGR02193 heptsyl_trn_I lipopo 88.8 2 4.4E-05 39.6 8.1 142 192-342 171-319 (319)
136 PLN02939 transferase, transfer 88.8 4.7 0.0001 42.7 11.2 82 254-343 837-930 (977)
137 PF06258 Mito_fiss_Elm1: Mitoc 87.9 5.6 0.00012 36.7 10.2 59 262-322 220-281 (311)
138 TIGR02400 trehalose_OtsA alpha 86.7 5.3 0.00012 39.0 9.8 71 260-345 342-423 (456)
139 PRK14099 glycogen synthase; Pr 86.6 5.1 0.00011 39.5 9.7 93 254-354 350-458 (485)
140 PF05159 Capsule_synth: Capsul 86.4 4.8 0.0001 36.2 8.8 81 217-300 141-226 (269)
141 cd03788 GT1_TPS Trehalose-6-Ph 85.5 2.6 5.6E-05 41.2 7.0 72 259-345 346-428 (460)
142 COG1817 Uncharacterized protei 84.0 34 0.00075 31.3 17.5 40 24-65 75-114 (346)
143 KOG2941 Beta-1,4-mannosyltrans 83.7 19 0.00042 33.4 11.0 144 198-358 252-424 (444)
144 PF07429 Glyco_transf_56: 4-al 82.1 11 0.00024 34.9 9.1 134 201-343 184-332 (360)
145 PF04464 Glyphos_transf: CDP-G 81.6 4.3 9.3E-05 38.3 6.6 116 218-345 219-337 (369)
146 cd03793 GT1_Glycogen_synthase_ 81.1 6.1 0.00013 39.4 7.5 80 264-346 468-554 (590)
147 COG0438 RfaG Glycosyltransfera 79.6 38 0.00083 30.2 12.2 80 254-345 257-343 (381)
148 PF00731 AIRC: AIR carboxylase 78.8 8.1 0.00018 31.3 6.3 142 202-365 2-150 (150)
149 COG3660 Predicted nucleoside-d 77.3 21 0.00046 31.8 8.8 130 189-322 152-298 (329)
150 PF06925 MGDG_synth: Monogalac 76.3 7.5 0.00016 32.1 5.8 35 13-48 69-103 (169)
151 PRK02155 ppnK NAD(+)/NADH kina 74.8 23 0.0005 32.3 9.0 95 217-345 22-120 (291)
152 PLN03063 alpha,alpha-trehalose 74.6 20 0.00043 37.8 9.5 64 266-344 371-443 (797)
153 cd07038 TPP_PYR_PDC_IPDC_like 74.3 8.2 0.00018 31.8 5.4 28 273-300 60-93 (162)
154 PRK02797 4-alpha-L-fucosyltran 72.1 81 0.0018 29.0 11.8 131 202-342 146-292 (322)
155 PLN02470 acetolactate synthase 71.2 9.8 0.00021 38.5 6.2 92 206-299 2-109 (585)
156 TIGR02195 heptsyl_trn_II lipop 70.9 22 0.00048 32.9 8.2 96 199-298 173-276 (334)
157 cd03789 GT1_LPS_heptosyltransf 70.5 10 0.00022 34.1 5.7 95 200-298 121-223 (279)
158 PRK04885 ppnK inorganic polyph 69.6 8.9 0.00019 34.5 4.9 28 270-299 35-68 (265)
159 cd07039 TPP_PYR_POX Pyrimidine 69.4 43 0.00093 27.5 8.7 26 274-299 65-96 (164)
160 TIGR02201 heptsyl_trn_III lipo 69.3 20 0.00044 33.3 7.6 97 199-298 180-285 (344)
161 TIGR02398 gluc_glyc_Psyn gluco 68.1 78 0.0017 31.2 11.4 89 257-361 365-464 (487)
162 PF01075 Glyco_transf_9: Glyco 67.9 9 0.0002 33.6 4.7 97 199-298 104-208 (247)
163 cd07037 TPP_PYR_MenD Pyrimidin 67.1 16 0.00034 30.1 5.6 27 274-300 62-94 (162)
164 PRK14077 pnk inorganic polypho 67.0 12 0.00025 34.1 5.2 58 266-345 60-121 (287)
165 COG0052 RpsB Ribosomal protein 66.8 19 0.0004 31.8 6.0 32 34-65 156-189 (252)
166 cd07035 TPP_PYR_POX_like Pyrim 65.1 26 0.00057 28.2 6.6 26 275-300 62-93 (155)
167 PF03033 Glyco_transf_28: Glyc 64.8 3.2 7E-05 32.7 1.1 32 34-65 100-131 (139)
168 PRK10964 ADP-heptose:LPS hepto 63.9 23 0.00051 32.6 6.8 132 200-343 178-321 (322)
169 TIGR00725 conserved hypothetic 63.5 52 0.0011 27.0 8.0 99 187-300 20-123 (159)
170 PRK01911 ppnK inorganic polyph 62.9 15 0.00032 33.5 5.1 58 266-345 60-121 (292)
171 PRK10422 lipopolysaccharide co 62.7 34 0.00073 32.0 7.7 97 199-298 182-287 (352)
172 PRK10916 ADP-heptose:LPS hepto 61.7 40 0.00086 31.4 8.0 96 199-298 179-286 (348)
173 PRK02649 ppnK inorganic polyph 61.0 17 0.00036 33.5 5.0 55 269-345 67-125 (305)
174 PRK07313 phosphopantothenoylcy 60.6 1E+02 0.0022 25.9 9.5 51 292-343 113-179 (182)
175 COG0859 RfaF ADP-heptose:LPS h 60.6 29 0.00063 32.3 6.7 95 200-298 175-276 (334)
176 PRK01231 ppnK inorganic polyph 59.7 61 0.0013 29.7 8.5 54 270-345 62-119 (295)
177 PRK04539 ppnK inorganic polyph 58.6 18 0.00039 33.1 4.8 58 266-345 64-125 (296)
178 PF06506 PrpR_N: Propionate ca 57.9 14 0.0003 30.9 3.7 69 269-342 31-122 (176)
179 PF02826 2-Hacid_dh_C: D-isome 56.9 15 0.00033 30.7 3.8 104 199-339 36-142 (178)
180 PF05014 Nuc_deoxyrib_tr: Nucl 56.7 11 0.00024 28.7 2.8 92 203-303 1-100 (113)
181 PRK12342 hypothetical protein; 56.6 24 0.00053 31.4 5.2 41 23-64 99-145 (254)
182 PRK03378 ppnK inorganic polyph 56.5 20 0.00044 32.6 4.8 58 266-345 59-120 (292)
183 PRK12446 undecaprenyldiphospho 56.4 54 0.0012 30.7 7.9 98 201-300 3-122 (352)
184 PRK03372 ppnK inorganic polyph 56.1 20 0.00042 33.0 4.7 56 268-345 70-129 (306)
185 COG3195 Uncharacterized protei 55.6 65 0.0014 26.5 6.9 95 264-362 65-164 (176)
186 PRK03359 putative electron tra 55.4 27 0.00058 31.2 5.3 42 22-64 101-148 (256)
187 PRK01185 ppnK inorganic polyph 52.1 25 0.00055 31.7 4.7 54 270-345 52-106 (271)
188 PRK09219 xanthine phosphoribos 51.2 33 0.00072 29.1 5.0 44 19-63 36-81 (189)
189 PRK08322 acetolactate synthase 50.6 34 0.00074 34.2 5.8 27 273-299 64-96 (547)
190 KOG0853 Glycosyltransferase [C 50.3 12 0.00026 36.6 2.4 54 284-345 381-434 (495)
191 TIGR00173 menD 2-succinyl-5-en 50.2 57 0.0012 31.6 7.1 26 274-299 65-96 (432)
192 PRK03501 ppnK inorganic polyph 50.0 32 0.00068 30.9 4.9 54 271-345 40-98 (264)
193 PRK14075 pnk inorganic polypho 49.8 31 0.00067 30.8 4.8 54 270-345 41-95 (256)
194 COG2159 Predicted metal-depend 49.3 85 0.0018 28.6 7.7 95 187-290 115-212 (293)
195 PLN02935 Bifunctional NADH kin 48.9 32 0.00069 33.8 5.0 55 269-345 261-319 (508)
196 PRK02231 ppnK inorganic polyph 48.8 38 0.00081 30.6 5.2 33 265-299 37-73 (272)
197 PLN02929 NADH kinase 48.2 29 0.00063 31.8 4.4 67 269-345 63-138 (301)
198 PRK08199 thiamine pyrophosphat 48.1 63 0.0014 32.5 7.3 27 273-299 72-104 (557)
199 PRK06276 acetolactate synthase 48.0 41 0.00089 34.0 6.0 26 274-299 65-96 (586)
200 PRK07525 sulfoacetaldehyde ace 46.9 67 0.0014 32.6 7.3 27 273-299 69-101 (588)
201 PRK08155 acetolactate synthase 46.8 35 0.00075 34.4 5.2 26 274-299 78-109 (564)
202 COG3340 PepE Peptidase E [Amin 46.7 1.8E+02 0.004 25.2 8.6 46 187-233 21-66 (224)
203 PRK06270 homoserine dehydrogen 46.4 1.1E+02 0.0024 28.6 8.2 59 263-322 80-150 (341)
204 PRK05579 bifunctional phosphop 45.4 1.8E+02 0.004 27.9 9.6 139 200-343 7-182 (399)
205 PRK13840 sucrose phosphorylase 44.9 2.1E+02 0.0045 28.4 9.9 132 187-338 269-414 (495)
206 COG2099 CobK Precorrin-6x redu 44.7 38 0.00083 30.0 4.4 43 18-62 51-100 (257)
207 COG1052 LdhA Lactate dehydroge 44.7 82 0.0018 29.2 6.9 102 200-339 147-251 (324)
208 PRK07710 acetolactate synthase 43.4 42 0.00091 33.8 5.2 26 274-299 80-111 (571)
209 cd01840 SGNH_hydrolase_yrhL_li 42.4 1E+02 0.0022 24.6 6.4 48 189-237 40-87 (150)
210 PRK14076 pnk inorganic polypho 42.3 40 0.00088 34.0 4.8 54 270-345 348-405 (569)
211 TIGR01012 Sa_S2_E_A ribosomal 42.2 49 0.0011 28.2 4.6 32 34-65 108-141 (196)
212 TIGR00118 acolac_lg acetolacta 41.6 82 0.0018 31.6 7.0 27 273-299 65-97 (558)
213 PF02776 TPP_enzyme_N: Thiamin 41.2 26 0.00057 28.9 2.9 27 274-300 66-98 (172)
214 PRK15409 bifunctional glyoxyla 41.2 1.1E+02 0.0025 28.3 7.3 66 199-283 145-211 (323)
215 PF05728 UPF0227: Uncharacteri 41.1 64 0.0014 27.2 5.2 41 24-65 48-91 (187)
216 PRK05858 hypothetical protein; 40.8 73 0.0016 31.9 6.4 25 275-299 70-100 (542)
217 PRK03708 ppnK inorganic polyph 40.7 42 0.00091 30.4 4.3 29 270-300 57-88 (277)
218 PF06180 CbiK: Cobalt chelatas 40.7 40 0.00086 30.2 4.0 38 201-238 2-42 (262)
219 TIGR00661 MJ1255 conserved hyp 40.6 63 0.0014 29.7 5.6 33 266-298 87-119 (321)
220 cd01981 Pchlide_reductase_B Pc 40.4 44 0.00096 32.3 4.7 37 23-63 360-396 (430)
221 PRK07418 acetolactate synthase 40.4 1.5E+02 0.0033 30.2 8.7 27 273-299 86-118 (616)
222 PRK08057 cobalt-precorrin-6x r 40.1 59 0.0013 28.9 5.0 41 21-63 53-100 (248)
223 PRK08410 2-hydroxyacid dehydro 40.1 1.6E+02 0.0034 27.2 8.0 60 199-280 145-204 (311)
224 CHL00076 chlB photochlorophyll 40.1 44 0.00095 33.3 4.6 36 23-62 364-399 (513)
225 PRK08527 acetolactate synthase 40.0 94 0.002 31.3 7.1 27 273-299 67-99 (563)
226 TIGR01278 DPOR_BchB light-inde 39.5 42 0.00091 33.4 4.4 37 23-63 354-390 (511)
227 PRK12311 rpsB 30S ribosomal pr 39.4 92 0.002 28.9 6.3 32 34-65 152-185 (326)
228 COG0801 FolK 7,8-dihydro-6-hyd 39.1 67 0.0015 26.4 4.8 34 202-235 3-36 (160)
229 cd03466 Nitrogenase_NifN_2 Nit 39.0 53 0.0012 31.8 5.0 35 23-61 362-396 (429)
230 PRK02910 light-independent pro 38.9 49 0.0011 33.0 4.8 35 24-62 353-387 (519)
231 cd01965 Nitrogenase_MoFe_beta_ 38.5 51 0.0011 31.9 4.8 35 23-61 361-395 (428)
232 PRK04020 rps2P 30S ribosomal p 38.4 62 0.0014 27.8 4.7 32 34-65 114-147 (204)
233 PRK11269 glyoxylate carboligas 38.0 79 0.0017 32.0 6.2 27 273-299 69-101 (591)
234 PF07355 GRDB: Glycine/sarcosi 37.3 79 0.0017 29.5 5.4 39 21-60 68-116 (349)
235 cd03412 CbiK_N Anaerobic cobal 37.3 63 0.0014 25.3 4.3 37 201-237 2-40 (127)
236 TIGR01162 purE phosphoribosyla 37.2 2.3E+02 0.005 23.2 10.2 136 206-366 4-149 (156)
237 TIGR01285 nifN nitrogenase mol 36.7 59 0.0013 31.6 4.8 34 24-61 364-397 (432)
238 PRK07064 hypothetical protein; 36.7 1.1E+02 0.0025 30.5 7.1 26 274-299 68-99 (544)
239 PRK06932 glycerate dehydrogena 36.3 1.8E+02 0.0038 26.9 7.7 62 199-283 147-208 (314)
240 PRK14501 putative bifunctional 36.2 52 0.0011 34.3 4.7 77 258-345 346-429 (726)
241 PRK06882 acetolactate synthase 36.2 87 0.0019 31.6 6.2 27 273-299 68-100 (574)
242 COG1154 Dxs Deoxyxylulose-5-ph 36.2 4.8E+02 0.01 26.5 15.1 111 199-344 501-624 (627)
243 cd07025 Peptidase_S66 LD-Carbo 35.8 82 0.0018 28.5 5.4 73 213-300 46-120 (282)
244 cd01141 TroA_d Periplasmic bin 35.8 43 0.00092 27.9 3.4 39 22-62 59-99 (186)
245 PF05225 HTH_psq: helix-turn-h 35.5 65 0.0014 20.1 3.3 26 330-357 1-26 (45)
246 PRK06487 glycerate dehydrogena 35.4 1.9E+02 0.0041 26.7 7.8 60 199-282 148-207 (317)
247 cd01976 Nitrogenase_MoFe_alpha 34.6 55 0.0012 31.6 4.3 37 22-62 358-394 (421)
248 PRK07449 2-succinyl-5-enolpyru 34.6 56 0.0012 32.9 4.5 26 275-300 75-106 (568)
249 COG2327 WcaK Polysaccharide py 34.2 2E+02 0.0043 27.4 7.7 70 265-344 280-350 (385)
250 TIGR01286 nifK nitrogenase mol 33.8 70 0.0015 31.9 4.9 35 23-61 427-461 (515)
251 COG3150 Predicted esterase [Ge 33.7 67 0.0015 26.7 3.9 43 23-65 47-91 (191)
252 PRK06456 acetolactate synthase 33.7 1.1E+02 0.0024 30.8 6.5 26 274-299 70-101 (572)
253 COG0299 PurN Folate-dependent 33.5 61 0.0013 27.6 3.7 30 34-63 29-58 (200)
254 KOG1250 Threonine/serine dehyd 33.5 80 0.0017 30.0 4.8 102 218-345 205-317 (457)
255 PRK08327 acetolactate synthase 33.5 1.9E+02 0.004 29.2 8.0 28 273-300 76-109 (569)
256 PRK08979 acetolactate synthase 33.2 97 0.0021 31.3 6.0 27 273-299 68-100 (572)
257 PRK06466 acetolactate synthase 32.4 1.6E+02 0.0034 29.8 7.3 26 274-299 69-100 (574)
258 PRK06048 acetolactate synthase 32.3 73 0.0016 32.0 4.9 26 274-299 72-103 (561)
259 PRK15469 ghrA bifunctional gly 32.2 3E+02 0.0065 25.3 8.5 66 200-284 137-202 (312)
260 PF10093 DUF2331: Uncharacteri 32.2 1.6E+02 0.0034 27.9 6.7 94 215-312 194-302 (374)
261 PRK08266 hypothetical protein; 31.8 1.3E+02 0.0028 30.1 6.5 26 274-299 70-101 (542)
262 PF00282 Pyridoxal_deC: Pyrido 31.7 1.1E+02 0.0023 29.1 5.6 70 273-344 104-191 (373)
263 PRK08673 3-deoxy-7-phosphohept 31.6 3.4E+02 0.0074 25.4 8.7 33 291-324 261-299 (335)
264 cd02071 MM_CoA_mut_B12_BD meth 31.3 2.4E+02 0.0053 21.6 7.5 67 147-238 21-88 (122)
265 PRK09213 pur operon repressor; 31.0 95 0.0021 28.0 4.8 30 34-63 130-161 (271)
266 PRK06965 acetolactate synthase 31.0 1.2E+02 0.0025 30.8 6.1 27 273-299 85-117 (587)
267 PF05693 Glycogen_syn: Glycoge 30.9 63 0.0014 32.6 4.0 95 262-361 461-566 (633)
268 TIGR00730 conserved hypothetic 30.5 3.2E+02 0.007 22.8 7.9 101 187-299 21-133 (178)
269 TIGR03609 S_layer_CsaB polysac 30.3 2.7E+02 0.0059 25.1 8.0 111 200-317 172-290 (298)
270 TIGR00715 precor6x_red precorr 30.3 1.1E+02 0.0023 27.4 5.0 38 22-61 54-98 (256)
271 TIGR01744 XPRTase xanthine pho 30.0 1E+02 0.0023 26.1 4.7 38 24-62 41-80 (191)
272 PRK13982 bifunctional SbtC-lik 29.8 5.6E+02 0.012 25.3 11.1 140 199-343 70-247 (475)
273 cd01018 ZntC Metal binding pro 29.7 1.8E+02 0.0039 25.9 6.5 39 26-65 210-250 (266)
274 cd06559 Endonuclease_V Endonuc 29.7 56 0.0012 28.2 3.1 38 24-61 82-127 (208)
275 COG0503 Apt Adenine/guanine ph 29.6 1.4E+02 0.0029 25.1 5.3 37 24-61 44-82 (179)
276 cd01974 Nitrogenase_MoFe_beta 29.6 97 0.0021 30.0 5.1 34 24-61 368-401 (435)
277 CHL00067 rps2 ribosomal protei 29.6 1.8E+02 0.0039 25.5 6.3 32 34-65 161-194 (230)
278 PRK08617 acetolactate synthase 29.4 1.2E+02 0.0025 30.5 5.8 26 274-299 69-100 (552)
279 PF06506 PrpR_N: Propionate ca 29.3 76 0.0016 26.4 3.8 31 34-67 125-155 (176)
280 PF08030 NAD_binding_6: Ferric 29.2 45 0.00098 26.7 2.4 39 201-239 3-46 (156)
281 PRK08558 adenine phosphoribosy 29.1 1.1E+02 0.0023 27.0 4.9 28 34-61 111-140 (238)
282 PRK07586 hypothetical protein; 28.9 1.2E+02 0.0026 30.1 5.7 25 275-299 67-97 (514)
283 COG2861 Uncharacterized protei 28.8 82 0.0018 27.7 3.9 54 7-60 122-178 (250)
284 PLN02727 NAD kinase 28.8 98 0.0021 33.0 5.0 55 269-345 742-800 (986)
285 PRK15438 erythronate-4-phospha 28.7 3.3E+02 0.0071 26.0 8.2 61 199-281 116-176 (378)
286 cd01980 Chlide_reductase_Y Chl 28.7 93 0.002 30.0 4.8 29 29-61 346-374 (416)
287 PRK02645 ppnK inorganic polyph 28.5 1.7E+02 0.0036 26.9 6.2 67 216-300 19-89 (305)
288 PRK07282 acetolactate synthase 28.5 1.1E+02 0.0024 30.8 5.5 27 273-299 74-106 (566)
289 PRK07574 formate dehydrogenase 28.3 2.1E+02 0.0045 27.3 6.9 68 200-284 193-260 (385)
290 PRK13278 purP 5-formaminoimida 28.1 4.7E+02 0.01 24.7 9.1 120 187-318 4-137 (358)
291 COG0111 SerA Phosphoglycerate 27.7 3.8E+02 0.0082 24.9 8.4 105 199-340 142-249 (324)
292 PRK05299 rpsB 30S ribosomal pr 27.5 1E+02 0.0022 27.6 4.4 32 34-65 157-190 (258)
293 COG2230 Cfa Cyclopropane fatty 27.5 48 0.001 30.0 2.4 38 280-318 81-121 (283)
294 PRK04761 ppnK inorganic polyph 27.4 52 0.0011 29.2 2.5 28 271-300 26-57 (246)
295 KOG0069 Glyoxylate/hydroxypyru 27.3 2.9E+02 0.0062 25.8 7.4 104 199-339 162-268 (336)
296 TIGR01862 N2-ase-Ialpha nitrog 27.1 78 0.0017 30.8 3.9 34 24-61 378-411 (443)
297 PRK07979 acetolactate synthase 27.0 2.2E+02 0.0048 28.7 7.3 27 273-299 68-100 (574)
298 TIGR02015 BchY chlorophyllide 26.9 74 0.0016 30.8 3.7 30 28-61 350-379 (422)
299 PRK15424 propionate catabolism 26.7 1.5E+02 0.0033 29.7 5.9 30 270-302 64-93 (538)
300 cd01425 RPS2 Ribosomal protein 26.5 1.1E+02 0.0025 25.8 4.4 32 34-65 127-160 (193)
301 cd07062 Peptidase_S66_mccF_lik 26.4 1.3E+02 0.0029 27.6 5.2 72 214-300 51-124 (308)
302 PHA02754 hypothetical protein; 26.4 90 0.002 20.6 2.8 23 339-364 8-30 (67)
303 PRK05282 (alpha)-aspartyl dipe 26.3 4.5E+02 0.0097 23.1 8.5 47 187-235 21-67 (233)
304 TIGR02836 spore_IV_A stage IV 26.2 2.2E+02 0.0048 27.7 6.5 74 266-342 139-233 (492)
305 TIGR01917 gly_red_sel_B glycin 26.0 1.5E+02 0.0033 28.5 5.4 40 21-61 64-113 (431)
306 PF04493 Endonuclease_5: Endon 26.0 1E+02 0.0022 26.6 4.0 42 20-61 74-123 (206)
307 TIGR02482 PFKA_ATP 6-phosphofr 25.9 70 0.0015 29.4 3.2 37 266-302 85-125 (301)
308 TIGR01918 various_sel_PB selen 25.8 1.5E+02 0.0033 28.4 5.4 40 21-61 64-113 (431)
309 TIGR01011 rpsB_bact ribosomal 25.8 1.2E+02 0.0025 26.6 4.4 32 34-65 155-188 (225)
310 PTZ00254 40S ribosomal protein 25.7 1.2E+02 0.0027 26.8 4.5 32 34-65 118-151 (249)
311 CHL00099 ilvB acetohydroxyacid 25.7 2.2E+02 0.0048 28.8 7.1 26 274-299 78-109 (585)
312 PRK13055 putative lipid kinase 25.6 2.6E+02 0.0057 25.9 7.1 26 275-300 62-93 (334)
313 COG1691 NCAIR mutase (PurE)-re 25.6 2.4E+02 0.0052 24.7 6.0 80 202-301 119-204 (254)
314 cd02070 corrinoid_protein_B12- 25.5 3.6E+02 0.0079 22.8 7.4 68 147-239 104-173 (201)
315 cd02067 B12-binding B12 bindin 25.4 3E+02 0.0065 20.8 7.4 68 147-239 21-89 (119)
316 PRK12474 hypothetical protein; 25.2 2.1E+02 0.0045 28.4 6.7 26 274-299 70-101 (518)
317 TIGR01743 purR_Bsub pur operon 25.1 1.7E+02 0.0037 26.3 5.4 29 34-62 128-158 (268)
318 PRK13059 putative lipid kinase 25.0 2.1E+02 0.0044 26.0 6.1 26 275-300 59-90 (295)
319 TIGR01284 alt_nitrog_alph nitr 24.9 77 0.0017 31.0 3.5 34 24-61 386-419 (457)
320 PRK14092 2-amino-4-hydroxy-6-h 24.9 1.7E+02 0.0036 24.2 4.9 31 198-228 5-35 (163)
321 KOG0081 GTPase Rab27, small G 24.8 1.7E+02 0.0036 24.1 4.7 32 34-65 124-165 (219)
322 COG2405 Predicted nucleic acid 24.8 1.6E+02 0.0035 23.6 4.5 50 9-61 63-112 (157)
323 PRK07524 hypothetical protein; 24.8 1.8E+02 0.004 29.0 6.2 25 275-299 67-97 (535)
324 PRK11914 diacylglycerol kinase 24.7 1.9E+02 0.0041 26.4 5.9 81 202-300 12-96 (306)
325 cd02069 methionine_synthase_B1 24.5 3.7E+02 0.008 23.2 7.3 68 147-239 110-177 (213)
326 PF01497 Peripla_BP_2: Peripla 24.1 1.2E+02 0.0025 26.1 4.2 41 23-65 51-93 (238)
327 PRK13243 glyoxylate reductase; 24.1 2.7E+02 0.0059 25.9 6.8 66 199-283 150-215 (333)
328 cd01147 HemV-2 Metal binding p 23.9 1.2E+02 0.0026 26.6 4.3 36 27-63 68-106 (262)
329 PRK08273 thiamine pyrophosphat 23.8 4.9E+02 0.011 26.4 9.1 27 273-299 68-100 (597)
330 PLN02928 oxidoreductase family 23.7 3.4E+02 0.0073 25.4 7.4 74 199-283 159-237 (347)
331 TIGR02370 pyl_corrinoid methyl 23.1 4.4E+02 0.0096 22.3 7.4 68 147-239 106-175 (197)
332 PF01995 DUF128: Domain of unk 23.1 3.6E+02 0.0079 23.8 6.9 80 199-299 144-223 (236)
333 PLN02948 phosphoribosylaminoim 23.1 8E+02 0.017 24.9 11.1 85 274-366 467-561 (577)
334 KOG1387 Glycosyltransferase [C 23.1 6.5E+02 0.014 23.8 18.7 40 24-65 142-182 (465)
335 PLN02293 adenine phosphoribosy 23.1 2.6E+02 0.0056 23.6 5.9 40 21-61 50-91 (187)
336 cd01977 Nitrogenase_VFe_alpha 22.7 88 0.0019 30.1 3.4 33 25-61 350-382 (415)
337 cd02072 Glm_B12_BD B12 binding 22.6 2.7E+02 0.0058 22.0 5.4 68 147-239 21-89 (128)
338 PF02571 CbiJ: Precorrin-6x re 22.5 1.6E+02 0.0034 26.2 4.7 41 21-63 54-101 (249)
339 TIGR01504 glyox_carbo_lig glyo 22.4 3.6E+02 0.0078 27.3 7.8 27 273-299 68-100 (588)
340 TIGR02113 coaC_strep phosphopa 22.2 4.6E+02 0.01 21.8 9.2 29 291-320 111-146 (177)
341 PLN03139 formate dehydrogenase 22.2 3.3E+02 0.0072 26.0 7.0 68 199-283 199-266 (386)
342 PRK04940 hypothetical protein; 22.2 2.7E+02 0.0059 23.4 5.7 31 35-65 61-92 (180)
343 PRK02261 methylaspartate mutas 22.1 4E+02 0.0087 21.1 7.7 68 147-239 25-93 (137)
344 PRK00945 acetyl-CoA decarbonyl 21.9 2.1E+02 0.0046 23.8 5.0 37 24-61 26-69 (171)
345 PF13477 Glyco_trans_4_2: Glyc 21.8 2E+02 0.0043 22.1 4.8 36 24-60 65-104 (139)
346 TIGR00347 bioD dethiobiotin sy 21.8 1.9E+02 0.0042 23.3 4.9 41 25-65 89-139 (166)
347 TIGR01860 VNFD nitrogenase van 21.8 1.1E+02 0.0024 29.9 3.9 29 27-59 391-419 (461)
348 TIGR01501 MthylAspMutase methy 21.7 2.4E+02 0.0053 22.3 5.1 68 147-239 23-91 (134)
349 PRK09107 acetolactate synthase 21.6 1.5E+02 0.0032 30.1 4.9 27 273-299 75-107 (595)
350 COG3200 AroG 3-deoxy-D-arabino 21.3 2.3E+02 0.005 26.5 5.4 52 187-240 296-352 (445)
351 cd00763 Bacterial_PFK Phosphof 21.2 96 0.0021 28.7 3.1 37 266-302 86-125 (317)
352 PRK08978 acetolactate synthase 21.2 1.1E+02 0.0025 30.5 4.0 26 274-299 65-96 (548)
353 PRK00257 erythronate-4-phospha 21.1 5.5E+02 0.012 24.5 8.3 62 199-282 116-177 (381)
354 PRK12315 1-deoxy-D-xylulose-5- 21.1 7.2E+02 0.016 25.2 9.6 52 278-342 524-580 (581)
355 TIGR03457 sulphoacet_xsc sulfo 21.1 1.2E+02 0.0025 30.8 4.0 27 273-299 65-97 (579)
356 PF15024 Glyco_transf_18: Glyc 20.9 2.2E+02 0.0048 28.5 5.6 78 260-345 328-431 (559)
357 COG1609 PurR Transcriptional r 20.9 5.7E+02 0.012 23.6 8.4 97 127-232 112-208 (333)
358 TIGR02418 acolac_catab acetola 20.9 1.2E+02 0.0026 30.3 4.0 26 274-299 63-94 (539)
359 PRK06457 pyruvate dehydrogenas 20.7 1.1E+02 0.0024 30.7 3.7 26 274-299 66-97 (549)
360 PRK06436 glycerate dehydrogena 20.7 6.3E+02 0.014 23.1 8.4 64 199-284 122-185 (303)
361 TIGR00147 lipid kinase, YegS/R 20.7 4E+02 0.0086 23.9 7.2 28 271-300 58-91 (293)
362 TIGR02483 PFK_mixed phosphofru 20.7 1E+02 0.0022 28.6 3.2 37 266-302 88-127 (324)
363 TIGR02720 pyruv_oxi_spxB pyruv 20.5 1.6E+02 0.0035 29.7 4.9 26 274-299 65-96 (575)
364 PRK14478 nitrogenase molybdenu 20.3 1.4E+02 0.003 29.4 4.2 34 23-60 383-416 (475)
365 PRK10353 3-methyl-adenine DNA 20.2 3.3E+02 0.0072 23.0 5.9 62 298-362 23-97 (187)
366 COG0028 IlvB Thiamine pyrophos 20.1 1.5E+02 0.0032 29.9 4.4 29 269-299 63-97 (550)
367 PRK13810 orotate phosphoribosy 20.1 2.7E+02 0.0059 23.5 5.4 36 25-61 65-102 (187)
368 PRK14477 bifunctional nitrogen 20.0 1.4E+02 0.003 32.3 4.4 37 22-62 378-414 (917)
No 1
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=4.8e-57 Score=432.78 Aligned_cols=353 Identities=40% Similarity=0.757 Sum_probs=289.1
Q ss_pred CHHHHHHHHHHHcHHHHHHHHHhcC----CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCC
Q 048393 9 SNQAYVDRFWKIGLQTFTELVERMN----DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPL 84 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~~~~----~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (369)
++..++..+.+.+.++++++|+... +++|||+|.++.|+.++|+++|||.++|++++++....+.+...+.++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~~~~~ 166 (480)
T PLN02555 87 DLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPT 166 (480)
T ss_pred CHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCCCccc
Confidence 5666788887788999999998541 459999999999999999999999999999999999888777555333222
Q ss_pred ---CCCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcCCCceeeeCc
Q 048393 85 ---TGDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQHWLLRTIGP 161 (369)
Q Consensus 85 ---~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~~~~~~~vGp 161 (369)
.+.++.+||+|.+..++++.++.....+..+.+.+ .+......+++++++|||++||+++.+.+.+. .+++.|||
T Consensus 167 ~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~-~~v~~iGP 244 (480)
T PLN02555 167 ETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAI-LGQYKNLDKPFCILIDTFQELEKEIIDYMSKL-CPIKPVGP 244 (480)
T ss_pred ccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHH-HHHHHhcccCCEEEEEchHHHhHHHHHHHhhC-CCEEEeCc
Confidence 12345689998888899998775322333444455 55566677899999999999999999888764 46999999
Q ss_pred cCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCc-
Q 048393 162 TLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESE- 240 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~- 240 (369)
+.+.... .+...+...+. .++++.+||+.++++++|||||||+..++.+++.+++.+|+.++++|||+++...
T Consensus 245 l~~~~~~-----~~~~~~~~~~~-~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~ 318 (480)
T PLN02555 245 LFKMAKT-----PNSDVKGDISK-PADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHK 318 (480)
T ss_pred ccCcccc-----ccccccccccc-cchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcc
Confidence 9753110 00011111122 2567999999998889999999999999999999999999999999999987421
Q ss_pred -----cCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhc
Q 048393 241 -----QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVG 315 (369)
Q Consensus 241 -----~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~ 315 (369)
...+|+++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.|
T Consensus 319 ~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~ 398 (480)
T PLN02555 319 DSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVF 398 (480)
T ss_pred cccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHh
Confidence 124777887788889999999999999999999999999999999999999999999999999999999999988
Q ss_pred CceEEecCC--CCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 316 KMGLKVPAD--EKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 316 g~g~~~~~~--~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
|+|+.+... +.+.+++++|.++|+++|.+++|+++|+||++|++++++|+.+||
T Consensus 399 gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egG 454 (480)
T PLN02555 399 KTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGG 454 (480)
T ss_pred CceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999531 112689999999999999888889999999999999999999998
No 2
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.1e-56 Score=424.98 Aligned_cols=353 Identities=49% Similarity=0.893 Sum_probs=281.1
Q ss_pred CCHHHHHHHHHHHcHHHHHHHHHhcC---C-CCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCC
Q 048393 8 ESNQAYVDRFWKIGLQTFTELVERMN---D-VDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLP 83 (369)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~ll~~~~---~-~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 83 (369)
+++..++..+.+.+.++++++|+... + ++|||+|.++.|+.++|+++|||++.|++++++....+.+....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~----- 148 (449)
T PLN02173 74 GSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYIN----- 148 (449)
T ss_pred cCHHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhc-----
Confidence 35667888888889999999998641 3 49999999999999999999999999999988877665442211
Q ss_pred CCCCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcCCCceeeeCccC
Q 048393 84 LTGDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQHWLLRTIGPTL 163 (369)
Q Consensus 84 ~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~~~~~~~vGp~~ 163 (369)
.....+.+||+|.+..++++.++..........+.+ .+.+....+++++++|||++||+++.+.+... .+++.|||+.
T Consensus 149 ~~~~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~-~~v~~VGPl~ 226 (449)
T PLN02173 149 NGSLTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMV-LQQFTNFDKADFVLVNSFHDLDLHENELLSKV-CPVLTIGPTV 226 (449)
T ss_pred cCCccCCCCCCCCCChhhCChhhcCCCCchHHHHHH-HHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc-CCeeEEcccC
Confidence 111335588998888889988775322222334444 55566677899999999999999988888654 5799999997
Q ss_pred CCccccccccccccccccccc-cChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccC
Q 048393 164 PSIYLDKQIEDDKEYGFSIFE-TNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQS 242 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 242 (369)
+..........+...+...+. ..++.+.+||+.++++++|||||||+...+.+++.+++.+| ++.+|+|+++.....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~~~ 304 (449)
T PLN02173 227 PSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASEES 304 (449)
T ss_pred chhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccchh
Confidence 531110000000000111121 22456999999998899999999999999999999999999 788899999864434
Q ss_pred CCCcchhccc-CCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEe
Q 048393 243 KLPENFSDET-SQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKV 321 (369)
Q Consensus 243 ~~~~~~~~~~-~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~ 321 (369)
.+|+++.++. ++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|+.+
T Consensus 305 ~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v 384 (449)
T PLN02173 305 KLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRV 384 (449)
T ss_pred cccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEE
Confidence 5777877766 578899999999999999999999999999999999999999999999999999999999988999998
Q ss_pred cCCC-CCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 322 PADE-KGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 322 ~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
..++ ++.+++++|.++|+++|.+++|+.+|+||++++++.++|+++||
T Consensus 385 ~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gG 433 (449)
T PLN02173 385 KAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGG 433 (449)
T ss_pred eecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6432 12479999999999999988889999999999999999999998
No 3
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.8e-55 Score=421.86 Aligned_cols=357 Identities=31% Similarity=0.618 Sum_probs=279.3
Q ss_pred CCHHHHHHHHHHHcHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCC--
Q 048393 8 ESNQAYVDRFWKIGLQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLT-- 85 (369)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~-- 85 (369)
.+...++..+.+.+.+.+++++++. ++||||+|.++.|+..+|+++|||++.|++++++.+..+.+.+....+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~ 156 (456)
T PLN02210 78 RAPETLLKSLNKVGAKNLSKIIEEK-RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLED 156 (456)
T ss_pred cCHHHHHHHHHHhhhHHHHHHHhcC-CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcccc
Confidence 3566788888888889999999887 8999999999999999999999999999999998888777653222122221
Q ss_pred -CCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcCCCceeeeCccCC
Q 048393 86 -GDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQHWLLRTIGPTLP 164 (369)
Q Consensus 86 -~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~~~~~~~vGp~~~ 164 (369)
..++.+||++.+..++++.++..... ..+...+ .+.......++++++|||+++|+++.+.+.+. .++++|||+++
T Consensus 157 ~~~~~~~Pgl~~~~~~dl~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~-~~v~~VGPl~~ 233 (456)
T PLN02210 157 LNQTVELPALPLLEVRDLPSFMLPSGG-AHFNNLM-AEFADCLRYVKWVLVNSFYELESEIIESMADL-KPVIPIGPLVS 233 (456)
T ss_pred cCCeeeCCCCCCCChhhCChhhhcCCc-hHHHHHH-HHHHHhcccCCEEEEeCHHHHhHHHHHHHhhc-CCEEEEcccCc
Confidence 12356889887788888876653221 2232333 34444556788999999999999998888764 57999999975
Q ss_pred Cccccccccc-cccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCC
Q 048393 165 SIYLDKQIED-DKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSK 243 (369)
Q Consensus 165 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 243 (369)
.......... ....+...+.. ++++.+|++.++++++|||||||....+.+++++++.+|+.++++|||+++......
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~ 312 (456)
T PLN02210 234 PFLLGDDEEETLDGKNLDMCKS-DDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQ 312 (456)
T ss_pred hhhcCccccccccccccccccc-chHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcccc
Confidence 3110000000 00001112232 678999999988889999999999988999999999999999999999997532211
Q ss_pred CCcchhccc-CCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEec
Q 048393 244 LPENFSDET-SQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVP 322 (369)
Q Consensus 244 ~~~~~~~~~-~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~ 322 (369)
.+..+.++. .+++++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|+.+.
T Consensus 313 ~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~ 392 (456)
T PLN02210 313 NVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMR 392 (456)
T ss_pred chhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEe
Confidence 223343443 3677889999999999999999999999999999999999999999999999999999998449999996
Q ss_pred CCC-CCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 323 ADE-KGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 323 ~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
..+ .+.+++++|+++|+++|.+++|+++|+||++|++..++|+++||
T Consensus 393 ~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gG 440 (456)
T PLN02210 393 NDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGG 440 (456)
T ss_pred ccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 431 23689999999999999988888999999999999999999998
No 4
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.7e-55 Score=419.07 Aligned_cols=344 Identities=28% Similarity=0.468 Sum_probs=276.2
Q ss_pred CHHHHHHHHHHHcHHHHHHHHHhcC---CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccC--cCCC
Q 048393 9 SNQAYVDRFWKIGLQTFTELVERMN---DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGL--IKLP 83 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~~~~---~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~--~~~~ 83 (369)
+...++..+.+...+.++++|+++. +++|||+|.++.|+..+|+++|||++.|++++++.+.++.+..... .+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~ 163 (451)
T PLN03004 84 HHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTPGK 163 (451)
T ss_pred CHHHHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcccccccc
Confidence 4445555566788889999998752 5699999999999999999999999999999999998887754221 1111
Q ss_pred --CCCCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-C-Cceeee
Q 048393 84 --LTGDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-H-WLLRTI 159 (369)
Q Consensus 84 --~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-~-~~~~~v 159 (369)
.+..++.+||+|.+..++++.++.... ......+ .+......+++++++|||++||+.+.+.+... + .+++.|
T Consensus 164 ~~~~~~~v~iPg~p~l~~~dlp~~~~~~~--~~~~~~~-~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~v 240 (451)
T PLN03004 164 NLKDIPTVHIPGVPPMKGSDMPKAVLERD--DEVYDVF-IMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPI 240 (451)
T ss_pred ccccCCeecCCCCCCCChHHCchhhcCCc--hHHHHHH-HHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEE
Confidence 112345689998888889888765321 2223444 55555667788999999999999999988653 2 379999
Q ss_pred CccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 048393 160 GPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRES 239 (369)
Q Consensus 160 Gp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 239 (369)
||+++... . .+ +. ...+.++.+||+.++++++|||||||...++.+++++++.+|+.++++|||+++..
T Consensus 241 GPl~~~~~----~-~~---~~---~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~ 309 (451)
T PLN03004 241 GPLIVNGR----I-ED---RN---DNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNP 309 (451)
T ss_pred eeeccCcc----c-cc---cc---cchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 99975310 0 00 00 01145799999999889999999999999999999999999999999999999853
Q ss_pred c--------cC-CCCcchhcccCCC-cEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHH
Q 048393 240 E--------QS-KLPENFSDETSQK-GLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAK 309 (369)
Q Consensus 240 ~--------~~-~~~~~~~~~~~~~-~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~ 309 (369)
. .. .+|++|.++..++ +.+.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+
T Consensus 310 ~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~ 389 (451)
T PLN03004 310 PELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRV 389 (451)
T ss_pred ccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHH
Confidence 1 12 2777888777654 456699999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 310 YIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 310 ~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
++++.||+|+.++..+.+.+++++|+++|+++|.++ +|++++++++++.++|+++||
T Consensus 390 ~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~~Av~~GG 446 (451)
T PLN03004 390 MIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAELALTETG 446 (451)
T ss_pred HHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhcCCC
Confidence 998755999999754222579999999999999987 999999999999999999998
No 5
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.1e-55 Score=419.93 Aligned_cols=341 Identities=31% Similarity=0.545 Sum_probs=276.2
Q ss_pred HHHHHHHHHHHcHHHHHHHHHhc----C-CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhc----cC-
Q 048393 10 NQAYVDRFWKIGLQTFTELVERM----N-DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNK----GL- 79 (369)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~ll~~~----~-~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~----~~- 79 (369)
...++..+...+.+.++++|++. . +++|||+|.++.|+.++|+++|||++.|++++++...++.++.. +.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~ 155 (451)
T PLN02410 76 PIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVL 155 (451)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCC
Confidence 45677777777888889888763 1 67999999999999999999999999999999998877665421 11
Q ss_pred cCCCC--CCCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-CCce
Q 048393 80 IKLPL--TGDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-HWLL 156 (369)
Q Consensus 80 ~~~~~--~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-~~~~ 156 (369)
.+.+. ...+..+||++.++.++++.+... ....+...+ .... ...+++++++|||++||+++.+.+.+. +.++
T Consensus 156 ~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~--~~~~~~~~~-~~~~-~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v 231 (451)
T PLN02410 156 APLKEPKGQQNELVPEFHPLRCKDFPVSHWA--SLESIMELY-RNTV-DKRTASSVIINTASCLESSSLSRLQQQLQIPV 231 (451)
T ss_pred CCccccccCccccCCCCCCCChHHCcchhcC--CcHHHHHHH-HHHh-hcccCCEEEEeChHHhhHHHHHHHHhccCCCE
Confidence 12221 123346889887777777765421 112222222 2222 346788999999999999999998764 3579
Q ss_pred eeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEE
Q 048393 157 RTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVV 236 (369)
Q Consensus 157 ~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~ 236 (369)
++|||+..... . +...++. ..++.+||+.++++++|||||||....+.+++++++.+|+.++++|+|++
T Consensus 232 ~~vGpl~~~~~--~--------~~~~~~~-~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~ 300 (451)
T PLN02410 232 YPIGPLHLVAS--A--------PTSLLEE-NKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVI 300 (451)
T ss_pred EEecccccccC--C--------Ccccccc-chHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEE
Confidence 99999964310 0 0011111 34688999999889999999999999999999999999999999999999
Q ss_pred eCCc------cCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHH
Q 048393 237 RESE------QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKY 310 (369)
Q Consensus 237 ~~~~------~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~ 310 (369)
+... ...+|++|.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||++
T Consensus 301 r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~ 380 (451)
T PLN02410 301 RPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARY 380 (451)
T ss_pred ccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHH
Confidence 8431 1237889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 311 IMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 311 ~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
+++.||+|+.+. . .+++++|+++|+++|.+++|++|+++++++++++++|+++||
T Consensus 381 ~~~~~~~G~~~~-~---~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gG 435 (451)
T PLN02410 381 LECVWKIGIQVE-G---DLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGG 435 (451)
T ss_pred HHHHhCeeEEeC-C---cccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 998889999997 3 689999999999999887788999999999999999999998
No 6
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=3.8e-55 Score=417.07 Aligned_cols=348 Identities=33% Similarity=0.630 Sum_probs=276.1
Q ss_pred CCHHHHHHHHHHHcHHHHHHHHHhcC----CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCC
Q 048393 8 ESNQAYVDRFWKIGLQTFTELVERMN----DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLP 83 (369)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~ll~~~~----~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 83 (369)
+++..++..+.+.+.+++++++++.. +++|||+|.++.|+.++|+++|||++.|++++++....+++.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~---- 151 (455)
T PLN02152 76 DDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGN---- 151 (455)
T ss_pred ccHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccC----
Confidence 35667777888889999999998641 5699999999999999999999999999999999888877654321
Q ss_pred CCCCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccc--cccEEEecchHhhhHHHHHHHhcCCCceeeeCc
Q 048393 84 LTGDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNID--KADWILCNTFYELEKEVTEWLGKQHWLLRTIGP 161 (369)
Q Consensus 84 ~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~s~~ele~~~~~~~~~~~~~~~~vGp 161 (369)
...+.+||+|.+..++++.++........+...+ .+...... .++++++|||++||+.+.+.+.+ .+++.|||
T Consensus 152 --~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~--~~v~~VGP 226 (455)
T PLN02152 152 --NSVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVY-QELMEFLKEESNPKILVNTFDSLEPEFLTAIPN--IEMVAVGP 226 (455)
T ss_pred --CCeeecCCCCCCchHHCchhhcCCCCchhHHHHH-HHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc--CCEEEEcc
Confidence 1245689998788889998775322222223333 44444332 25799999999999999988865 47999999
Q ss_pred cCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 048393 162 TLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQ 241 (369)
Q Consensus 162 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 241 (369)
+.+.....+. .+ ..+... ...+.++.+||+.++++++|||||||...++.+++++++.+|+.++++|||+++....
T Consensus 227 L~~~~~~~~~--~~-~~~~~~-~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~ 302 (455)
T PLN02152 227 LLPAEIFTGS--ES-GKDLSV-RDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLN 302 (455)
T ss_pred cCcccccccc--cc-Cccccc-cccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 9763110000 00 000011 1124579999999988899999999999999999999999999999999999975210
Q ss_pred -------C-----CCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHH
Q 048393 242 -------S-----KLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAK 309 (369)
Q Consensus 242 -------~-----~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~ 309 (369)
. .+++++.++.++|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+
T Consensus 303 ~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~ 382 (455)
T PLN02152 303 REAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAK 382 (455)
T ss_pred cccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHH
Confidence 0 1356777778889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 310 YIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 310 ~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
++++.||+|+.+..+..+.+++++|+++|+++|+++ +.+||+||+++++++++++++||
T Consensus 383 ~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~gg 441 (455)
T PLN02152 383 LLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGEGG 441 (455)
T ss_pred HHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcCCC
Confidence 999977888887543222569999999999999754 56799999999999999999998
No 7
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=8.2e-55 Score=414.11 Aligned_cols=343 Identities=27% Similarity=0.478 Sum_probs=273.7
Q ss_pred CHHHHHHHHHHHcHHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHhCCC-cEEEcccchHHHHHHHHhhc--cCcCC--
Q 048393 9 SNQAYVDRFWKIGLQTFTELVERMN-DVDCIVYDSFLPWALDVAKKFGLT-GAAFLTQSCAVASIYHHVNK--GLIKL-- 82 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~~~~-~~D~vI~D~~~~~~~~~A~~lgiP-~v~~~~~~~~~~~~~~~~~~--~~~~~-- 82 (369)
+....+..+.+.+.++++++|++.. +++|||+|.++.|+.++|+++||| .+.|++++++....+.+.+. +...-
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~~ 160 (470)
T PLN03015 81 TIFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEY 160 (470)
T ss_pred cHHHHHHHHHHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhccccccc
Confidence 3443444455688899999998764 679999999999999999999999 68888988877766655431 11111
Q ss_pred CCCCCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-------CCc
Q 048393 83 PLTGDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-------HWL 155 (369)
Q Consensus 83 ~~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-------~~~ 155 (369)
.....++.+||+|.+..++++.++.... ... ...+ .+......+++++++|||+|||+.+.+.+.+. +.+
T Consensus 161 ~~~~~~~~vPg~p~l~~~dlp~~~~~~~-~~~-~~~~-~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~ 237 (470)
T PLN03015 161 VDIKEPLKIPGCKPVGPKELMETMLDRS-DQQ-YKEC-VRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVP 237 (470)
T ss_pred CCCCCeeeCCCCCCCChHHCCHhhcCCC-cHH-HHHH-HHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCc
Confidence 0112345689998888889887554211 122 2233 34444577899999999999999999888653 256
Q ss_pred eeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEE
Q 048393 156 LRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWV 235 (369)
Q Consensus 156 ~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~ 235 (369)
++.|||+++. + .+ ...+.++.+||+.++++++|||||||...++.+++++++.+|+.++++|||+
T Consensus 238 v~~VGPl~~~-----~--------~~--~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv 302 (470)
T PLN03015 238 VYPIGPIVRT-----N--------VH--VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWV 302 (470)
T ss_pred eEEecCCCCC-----c--------cc--ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEE
Confidence 9999999742 0 11 1114579999999988999999999999999999999999999999999999
Q ss_pred EeCC-------------ccCCCCcchhcccCCCcEEE-eccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCC
Q 048393 236 VRES-------------EQSKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQW 301 (369)
Q Consensus 236 ~~~~-------------~~~~~~~~~~~~~~~~~~~~-~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~ 301 (369)
++.. ....+|+++.++..++++++ +|+||.+||+|+++++|||||||||++||+++|||||++|++
T Consensus 303 ~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~ 382 (470)
T PLN03015 303 LRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLY 382 (470)
T ss_pred EecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccc
Confidence 9732 11247788888887777654 999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHhhcCceEEecC-CCCCCcCHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 302 SDQSTNAKYIMDVGKMGLKVPA-DEKGIVRREAIAHCINEILEG--ERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 302 ~dQ~~na~~~~~~~g~g~~~~~-~~~~~~~~~~l~~~i~~~l~~--~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
.||+.||+++++.||+|+.+.. .+.+.+++++++++|+++|.+ ++|+++|+||++|++++++|+++||
T Consensus 383 ~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGG 453 (470)
T PLN03015 383 AEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGG 453 (470)
T ss_pred cchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999766699999952 112268999999999999963 6789999999999999999999998
No 8
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=1.4e-54 Score=414.82 Aligned_cols=341 Identities=30% Similarity=0.507 Sum_probs=271.5
Q ss_pred CHHHHHHHHHHHcHHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhc--cCcCCC--
Q 048393 9 SNQAYVDRFWKIGLQTFTELVERMN-DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNK--GLIKLP-- 83 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~~~~-~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~--~~~~~~-- 83 (369)
+....+..+...+.+.++++|++.. +++|||+|.++.|+.++|+++|||++.|++++++....+.+... ......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~ 157 (481)
T PLN02992 78 HVVTKIGVIMREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHT 157 (481)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccc
Confidence 3444455556677889999998753 78999999999999999999999999999999888766554431 111110
Q ss_pred CCCCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-------CCce
Q 048393 84 LTGDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-------HWLL 156 (369)
Q Consensus 84 ~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-------~~~~ 156 (369)
....++.+||++.++..+++..+..... .....+ .+......+++++++|||++||+.+.+.+.+. +.++
T Consensus 158 ~~~~~~~iPg~~~l~~~dlp~~~~~~~~--~~~~~~-~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v 234 (481)
T PLN02992 158 VQRKPLAMPGCEPVRFEDTLDAYLVPDE--PVYRDF-VRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPV 234 (481)
T ss_pred cCCCCcccCCCCccCHHHhhHhhcCCCc--HHHHHH-HHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCce
Confidence 0112456899887777888864432221 223344 45555667899999999999999999888642 2579
Q ss_pred eeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEE
Q 048393 157 RTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVV 236 (369)
Q Consensus 157 ~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~ 236 (369)
+.|||+++.. + . ...+.++.+||+.++++++|||||||...++.+++++++.+|+.++++|||++
T Consensus 235 ~~VGPl~~~~---~---------~---~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~ 299 (481)
T PLN02992 235 YPIGPLCRPI---Q---------S---SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVV 299 (481)
T ss_pred EEecCccCCc---C---------C---CcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999997531 0 0 01156799999998889999999999999999999999999999999999999
Q ss_pred eCCc--------------------cCCCCcchhcccCCCcEE-EeccChHHhhcccCcCceeecCChhhHHHHHhhCCce
Q 048393 237 RESE--------------------QSKLPENFSDETSQKGLV-VNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPM 295 (369)
Q Consensus 237 ~~~~--------------------~~~~~~~~~~~~~~~~~~-~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~ 295 (369)
+... ...+|+++.++..++.++ .+|+||.+||+|+++++|||||||||++||+++||||
T Consensus 300 r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~ 379 (481)
T PLN02992 300 RPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPM 379 (481)
T ss_pred eCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCE
Confidence 6310 123777888877766655 5999999999999999999999999999999999999
Q ss_pred eecCCCCChhHHHHHHH-hhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHh--cCC
Q 048393 296 LAMPQWSDQSTNAKYIM-DVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVA--KGG 369 (369)
Q Consensus 296 i~~P~~~dQ~~na~~~~-~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~--~~g 369 (369)
|++|++.||+.||++++ +. |+|+.++.. ++.+++++|.++|+++|.+++|+.++++++++++++++|++ +||
T Consensus 380 l~~P~~~DQ~~na~~~~~~~-g~gv~~~~~-~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GG 454 (481)
T PLN02992 380 IAWPLFAEQNMNAALLSDEL-GIAVRSDDP-KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGG 454 (481)
T ss_pred EecCccchhHHHHHHHHHHh-CeeEEecCC-CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999996 66 999999753 11589999999999999988888999999999999999995 487
No 9
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=3.7e-54 Score=411.12 Aligned_cols=346 Identities=27% Similarity=0.468 Sum_probs=269.8
Q ss_pred CHHHHHHHHHHHc----HHHHHHHHHhcC----CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCc
Q 048393 9 SNQAYVDRFWKIG----LQTFTELVERMN----DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLI 80 (369)
Q Consensus 9 ~~~~~~~~~~~~~----~~~l~~ll~~~~----~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 80 (369)
+...++..+.+.. .+.+.+++++.. +++|||+|.++.|+.++|+++|||++.|++++++...++.+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~ 161 (468)
T PLN02207 82 SVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHS 161 (468)
T ss_pred CHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccc
Confidence 4555554444555 446677776431 34899999999999999999999999999999988877766532111
Q ss_pred C---C--CCCCCcccCCCC-CCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhc--C
Q 048393 81 K---L--PLTGDEVLLPGL-PPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGK--Q 152 (369)
Q Consensus 81 ~---~--~~~~~~~~~pg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~--~ 152 (369)
+ . +..+.++.+||+ +.+..++++.++..... ...+ .+......+++++++|||++||+++...+.. .
T Consensus 162 ~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~----~~~~-~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~ 236 (468)
T PLN02207 162 KDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDG----YDAY-VKLAILFTKANGILVNSSFDIEPYSVNHFLDEQN 236 (468)
T ss_pred cccccCcCCCCCeEECCCCCCCCChHHCcchhcCCcc----HHHH-HHHHHhcccCCEEEEEchHHHhHHHHHHHHhccC
Confidence 1 1 111234568998 57888899887643221 2223 4444456789999999999999988888744 2
Q ss_pred CCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcE
Q 048393 153 HWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYF 232 (369)
Q Consensus 153 ~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~ 232 (369)
..+++.|||+..... ...+. ... ..++++.+||+.++++++|||||||....+.+++++++.+|+.++++|
T Consensus 237 ~p~v~~VGPl~~~~~--~~~~~-----~~~--~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~f 307 (468)
T PLN02207 237 YPSVYAVGPIFDLKA--QPHPE-----QDL--ARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRF 307 (468)
T ss_pred CCcEEEecCCccccc--CCCCc-----ccc--chhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcE
Confidence 245999999975310 00000 000 114679999999988899999999999999999999999999999999
Q ss_pred EEEEeCCc---cCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHH
Q 048393 233 LWVVRESE---QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAK 309 (369)
Q Consensus 233 i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~ 309 (369)
||+++... ...+|+++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+
T Consensus 308 lW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~ 387 (468)
T PLN02207 308 LWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAF 387 (468)
T ss_pred EEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHH
Confidence 99998532 234788888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCceEEecCC----CCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 310 YIMDVGKMGLKVPAD----EKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 310 ~~~~~~g~g~~~~~~----~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
++++.||+|+.+..+ .++.+++++|.++|+++|.+ ++++||+||+++++++++|+.+||
T Consensus 388 ~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GG 450 (468)
T PLN02207 388 LMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGG 450 (468)
T ss_pred HHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCC
Confidence 988855999977421 11246999999999999973 356999999999999999999998
No 10
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=8.9e-54 Score=412.61 Aligned_cols=346 Identities=28% Similarity=0.503 Sum_probs=276.6
Q ss_pred CHHHHHHHHHHHcHHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhcc--CcC--CC
Q 048393 9 SNQAYVDRFWKIGLQTFTELVERMN-DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKG--LIK--LP 83 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~~~~-~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~--~~~--~~ 83 (369)
+...++..+...+.+.++++++... +++|||+|.++.|+.++|+++|||++.|++++++...++.+.... ..+ .+
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~ 163 (480)
T PLN00164 84 GVEEFISRYIQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFE 163 (480)
T ss_pred cHHHHHHHHHHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccCccc
Confidence 4556777777888999999998753 569999999999999999999999999999999988887766421 111 11
Q ss_pred CCCCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC----C---Cce
Q 048393 84 LTGDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ----H---WLL 156 (369)
Q Consensus 84 ~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~----~---~~~ 156 (369)
....++.+||++.++.++++.++..... . ....+ ........+++++++|||+|||+.+.+.+.+. + .++
T Consensus 164 ~~~~~~~iPGlp~l~~~dlp~~~~~~~~-~-~~~~~-~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v 240 (480)
T PLN00164 164 EMEGAVDVPGLPPVPASSLPAPVMDKKS-P-NYAWF-VYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTV 240 (480)
T ss_pred ccCcceecCCCCCCChHHCCchhcCCCc-H-HHHHH-HHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCce
Confidence 1113455899988888898876643221 1 12233 33445567789999999999999999888663 1 369
Q ss_pred eeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEE
Q 048393 157 RTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVV 236 (369)
Q Consensus 157 ~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~ 236 (369)
+.|||+.+... . +. . ...++++.+||+.++++++|||||||....+.+++++++.+|+.++++|||++
T Consensus 241 ~~vGPl~~~~~--~--------~~-~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~ 308 (480)
T PLN00164 241 YPIGPVISLAF--T--------PP-A-EQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVL 308 (480)
T ss_pred EEeCCCccccc--c--------CC-C-ccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 99999974210 0 00 0 11267899999999889999999999998999999999999999999999999
Q ss_pred eCCc------------cCCCCcchhcccCCCcEEE-eccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCC
Q 048393 237 RESE------------QSKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSD 303 (369)
Q Consensus 237 ~~~~------------~~~~~~~~~~~~~~~~~~~-~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~d 303 (369)
+... ...+|+++.++..++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~D 388 (480)
T PLN00164 309 RGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAE 388 (480)
T ss_pred cCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCcccc
Confidence 8531 1126778777777777666 89999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhcCceEEecCCC--CCCcCHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 304 QSTNAKYIMDVGKMGLKVPADE--KGIVRREAIAHCINEILEGE--RGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 304 Q~~na~~~~~~~g~g~~~~~~~--~~~~~~~~l~~~i~~~l~~~--~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
|+.||+++++.||+|+.+...+ .+.+++++|.++|+++|.++ +|+.+|++|+++++++++|+.+||
T Consensus 389 Q~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gG 458 (480)
T PLN00164 389 QHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGG 458 (480)
T ss_pred chhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999998866559999985321 12479999999999999875 478999999999999999999998
No 11
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.7e-53 Score=405.60 Aligned_cols=341 Identities=27% Similarity=0.502 Sum_probs=265.7
Q ss_pred HHHHHHHHHcHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhh----ccCcCCCCCCC
Q 048393 12 AYVDRFWKIGLQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVN----KGLIKLPLTGD 87 (369)
Q Consensus 12 ~~~~~~~~~~~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 87 (369)
.++....+.+.+.+++++++. +++|||+|.++.|+.++|+++|||++.|++++++...++.+.. .+..+.+. .
T Consensus 89 ~~~~~~~~~~~~~~~~~l~~~-~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~--~ 165 (472)
T PLN02670 89 QLLKKAFDLLEPPLTTFLETS-KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTA--E 165 (472)
T ss_pred HHHHHHHHHhHHHHHHHHHhC-CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCcc--c
Confidence 456667788899999999887 8999999999999999999999999999999988887765432 12222111 1
Q ss_pred cc-cCCCC-C-----CCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-CCceeee
Q 048393 88 EV-LLPGL-P-----PLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-HWLLRTI 159 (369)
Q Consensus 88 ~~-~~pg~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-~~~~~~v 159 (369)
.. .+|++ | .+..++++.++............+ .+......+++++++|||+|||+.+.+.+.+. +.+++.|
T Consensus 166 ~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~V 244 (472)
T PLN02670 166 DFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDS-VRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPI 244 (472)
T ss_pred cccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHH-HHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEE
Confidence 11 24443 2 134457776664322221222333 44444566789999999999999999998764 3579999
Q ss_pred CccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 048393 160 GPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRES 239 (369)
Q Consensus 160 Gp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 239 (369)
||+.+... .+. + +.. .. ....+++.+||+.++++++|||||||+..++.+++++++.+|+.++++|||+++..
T Consensus 245 GPl~~~~~-~~~-~-~~~--~~--~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~ 317 (472)
T PLN02670 245 GFLPPVIE-DDE-E-DDT--ID--VKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNE 317 (472)
T ss_pred ecCCcccc-ccc-c-ccc--cc--cchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 99975310 000 0 000 00 01136799999999888999999999999999999999999999999999999852
Q ss_pred c------cCCCCcchhcccCCCcEEE-eccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHH
Q 048393 240 E------QSKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIM 312 (369)
Q Consensus 240 ~------~~~~~~~~~~~~~~~~~~~-~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~ 312 (369)
. ...+|+++.++..++++++ +|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||++++
T Consensus 318 ~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~ 397 (472)
T PLN02670 318 PGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLH 397 (472)
T ss_pred cccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHH
Confidence 1 1247888888877777764 99999999999999999999999999999999999999999999999999999
Q ss_pred hhcCceEEecCCC-CCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 048393 313 DVGKMGLKVPADE-KGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEA 364 (369)
Q Consensus 313 ~~~g~g~~~~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~ 364 (369)
+. |+|+.+...+ .+.+++++|+++|+++|.+++|++||+||+++++.+++.
T Consensus 398 ~~-g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~ 449 (472)
T PLN02670 398 GK-KLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDM 449 (472)
T ss_pred Hc-CeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCc
Confidence 87 9999997532 235899999999999998888889999999999998864
No 12
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=7.4e-53 Score=403.33 Aligned_cols=343 Identities=30% Similarity=0.511 Sum_probs=269.9
Q ss_pred CHHHHHHHHHHHcHHHHHHHHHhcC---CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhc----cCcC
Q 048393 9 SNQAYVDRFWKIGLQTFTELVERMN---DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNK----GLIK 81 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~~~~---~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~----~~~~ 81 (369)
++..++..+...+.+.++++++++. +++|||+|.++.|+.++|+++|||++.|++++++....+.+... +..+
T Consensus 75 ~~~~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~ 154 (448)
T PLN02562 75 DFFSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLIS 154 (448)
T ss_pred cHHHHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccc
Confidence 3445566666678999999998753 45899999999999999999999999999999887776654421 1111
Q ss_pred C---CCCCCcc-cCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhc-----C
Q 048393 82 L---PLTGDEV-LLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGK-----Q 152 (369)
Q Consensus 82 ~---~~~~~~~-~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~-----~ 152 (369)
. +....++ .+||+|.++.++++.++............+ .+.+....+++++++|||++||+++.+.+.+ .
T Consensus 155 ~~~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~ 233 (448)
T PLN02562 155 ETGCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFW-TRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQ 233 (448)
T ss_pred cccccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHH-HHHHhccccCCEEEEcChhhhCHHHHHHHHhhhcccc
Confidence 1 1111222 579988788888888765332223334455 5566667788999999999999987776642 2
Q ss_pred CCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccc-cCCHHHHHHHHHHHHhCCCc
Q 048393 153 HWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMA-TLKMEQMEELAWGLKASDKY 231 (369)
Q Consensus 153 ~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~-~~~~~~~~~~~~~l~~~~~~ 231 (369)
..+++.|||+.+... . . ..+...+.+ +.++.+||+.++++++|||||||+. ..+.+++++++.+|+.++++
T Consensus 234 ~~~v~~iGpl~~~~~--~----~-~~~~~~~~~-~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~ 305 (448)
T PLN02562 234 NPQILQIGPLHNQEA--T----T-ITKPSFWEE-DMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRP 305 (448)
T ss_pred CCCEEEecCcccccc--c----c-cCCCccccc-hHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCC
Confidence 246999999975310 0 0 000111111 4567899999988899999999986 67889999999999999999
Q ss_pred EEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHH
Q 048393 232 FLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYI 311 (369)
Q Consensus 232 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~ 311 (369)
|||+++......+++++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++
T Consensus 306 fiW~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~ 385 (448)
T PLN02562 306 FIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYI 385 (448)
T ss_pred EEEEEcCCchhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHH
Confidence 99999764333578788778888999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 312 MDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 312 ~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
++.||+|+.++ .+++++|.++|+++|.|+ +|++||++++++++++ ..||
T Consensus 386 ~~~~g~g~~~~-----~~~~~~l~~~v~~~l~~~---~~r~~a~~l~~~~~~~-~~gG 434 (448)
T PLN02562 386 VDVWKIGVRIS-----GFGQKEVEEGLRKVMEDS---GMGERLMKLRERAMGE-EARL 434 (448)
T ss_pred HHHhCceeEeC-----CCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhc-CCCC
Confidence 87569998885 579999999999999988 9999999999998877 4454
No 13
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.4e-53 Score=405.96 Aligned_cols=350 Identities=28% Similarity=0.418 Sum_probs=269.9
Q ss_pred HHHHHHHHcHHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCC--C-CCCCc
Q 048393 13 YVDRFWKIGLQTFTELVERMN-DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKL--P-LTGDE 88 (369)
Q Consensus 13 ~~~~~~~~~~~~l~~ll~~~~-~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~ 88 (369)
++........+++.+++++.. +++|||+|.++.|+.++|+++|||++.|++++++.+..+.+.+...... + ....+
T Consensus 92 ~~~~a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (477)
T PLN02863 92 LMIHALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEI 171 (477)
T ss_pred HHHHHHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccccccccccccc
Confidence 444455677888888888743 6799999999999999999999999999999999999888775432110 1 11112
Q ss_pred c---cCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-C-CceeeeCccC
Q 048393 89 V---LLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-H-WLLRTIGPTL 163 (369)
Q Consensus 89 ~---~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-~-~~~~~vGp~~ 163 (369)
+ .+||++.++.++++.++........+...+ .+.......++++++|||++||+.+.+.+.+. + .+++.|||++
T Consensus 172 ~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~ 250 (477)
T PLN02863 172 LSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFI-KDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPIL 250 (477)
T ss_pred cccCCCCCCCCcChHhCchhhhccCccchHHHHH-HHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCc
Confidence 2 468888888888887765322222233344 44444445678899999999999999998764 3 4699999997
Q ss_pred CCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCc---
Q 048393 164 PSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESE--- 240 (369)
Q Consensus 164 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~--- 240 (369)
+... ..+ .....|..... .++++.+||+.++++++|||||||....+.+++++++.+|+.++++|||+++...
T Consensus 251 ~~~~-~~~--~~~~~~~~~~~-~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~ 326 (477)
T PLN02863 251 PLSG-EKS--GLMERGGPSSV-SVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEE 326 (477)
T ss_pred cccc-ccc--cccccCCcccc-cHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccc
Confidence 5311 000 00011111111 2567999999998899999999999999999999999999999999999997432
Q ss_pred --cCCCCcchhcccCCC-cEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCc
Q 048393 241 --QSKLPENFSDETSQK-GLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKM 317 (369)
Q Consensus 241 --~~~~~~~~~~~~~~~-~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~ 317 (369)
...+|+++.++..++ +++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+
T Consensus 327 ~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gv 406 (477)
T PLN02863 327 SDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKV 406 (477)
T ss_pred cchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhce
Confidence 224777776665444 45569999999999999999999999999999999999999999999999999998766699
Q ss_pred eEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 318 GLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 318 g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
|+.+.....+.++.+++.++|+++|. ++++||+||+++++++++|+++||
T Consensus 407 G~~~~~~~~~~~~~~~v~~~v~~~m~--~~~~~r~~a~~l~e~a~~Av~~gG 456 (477)
T PLN02863 407 AVRVCEGADTVPDSDELARVFMESVS--ENQVERERAKELRRAALDAIKERG 456 (477)
T ss_pred eEEeccCCCCCcCHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHhccCC
Confidence 99995432225689999999999994 234999999999999999999998
No 14
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.9e-53 Score=409.55 Aligned_cols=342 Identities=29% Similarity=0.470 Sum_probs=269.1
Q ss_pred CHHHHHHHHHHHcHHHHHHHHHhc---C--CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccC----
Q 048393 9 SNQAYVDRFWKIGLQTFTELVERM---N--DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGL---- 79 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~~~---~--~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~---- 79 (369)
++..+++.+.+...+.+++++.+. . +++|||+|.++.|+.++|+++|||++.|++++++.+.++.+.....
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~ 161 (481)
T PLN02554 82 TFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKK 161 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccc
Confidence 344456666666777777776541 1 3489999999999999999999999999999999998887764321
Q ss_pred cCCC---CCCCcccCCCCC-CCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC---
Q 048393 80 IKLP---LTGDEVLLPGLP-PLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ--- 152 (369)
Q Consensus 80 ~~~~---~~~~~~~~pg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~--- 152 (369)
.+.+ ....++.+||++ +++..+++.++.. ..+...+ .+......+++++++|||+++|+.+...+.+.
T Consensus 162 ~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~----~~~~~~~-~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~ 236 (481)
T PLN02554 162 YDVSELEDSEVELDVPSLTRPYPVKCLPSVLLS----KEWLPLF-LAQARRFREMKGILVNTVAELEPQALKFFSGSSGD 236 (481)
T ss_pred cCccccCCCCceeECCCCCCCCCHHHCCCcccC----HHHHHHH-HHHHHhcccCCEEEEechHHHhHHHHHHHHhcccC
Confidence 1111 111335689984 5777788766542 1223344 55555677899999999999999999988763
Q ss_pred CCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcE
Q 048393 153 HWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYF 232 (369)
Q Consensus 153 ~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~ 232 (369)
..+++.|||++..... .+ +. ..+.+.++.+|++.++++++|||||||+..++.+++++++.+|+.++++|
T Consensus 237 ~~~v~~vGpl~~~~~~-----~~---~~--~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~f 306 (481)
T PLN02554 237 LPPVYPVGPVLHLENS-----GD---DS--KDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRF 306 (481)
T ss_pred CCCEEEeCCCcccccc-----cc---cc--ccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCe
Confidence 1469999999432000 00 00 01235789999999888899999999998889999999999999999999
Q ss_pred EEEEeCCc--------------cCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeec
Q 048393 233 LWVVRESE--------------QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 233 i~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~ 298 (369)
||+++... ...+|+++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+|
T Consensus 307 lW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~ 386 (481)
T PLN02554 307 LWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAW 386 (481)
T ss_pred EEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEec
Confidence 99997521 1125778887888999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHH-HHHhhcCceEEecCC--------CCCCcCHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHhcC
Q 048393 299 PQWSDQSTNAK-YIMDVGKMGLKVPAD--------EKGIVRREAIAHCINEILE-GERGKEIKQNADKWRNFAKEAVAKG 368 (369)
Q Consensus 299 P~~~dQ~~na~-~~~~~~g~g~~~~~~--------~~~~~~~~~l~~~i~~~l~-~~~~~~~~~~a~~l~~~~~~~~~~~ 368 (369)
|+++||+.||+ ++++. |+|+.+... +.+.+++++|+++|+++|. |+ +||+||+++++++++|+++|
T Consensus 387 P~~~DQ~~Na~~~v~~~-g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~---~~r~~a~~l~~~~~~av~~g 462 (481)
T PLN02554 387 PLYAEQKFNAFEMVEEL-GLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDS---DVRKRVKEMSEKCHVALMDG 462 (481)
T ss_pred CccccchhhHHHHHHHh-CceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHhcCC
Confidence 99999999995 46667 999998631 1126899999999999996 55 89999999999999999999
Q ss_pred C
Q 048393 369 G 369 (369)
Q Consensus 369 g 369 (369)
|
T Consensus 463 G 463 (481)
T PLN02554 463 G 463 (481)
T ss_pred C
Confidence 8
No 15
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=2.5e-52 Score=400.73 Aligned_cols=346 Identities=27% Similarity=0.508 Sum_probs=263.5
Q ss_pred HHHHHcHHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhh--ccCcCCCCCCCcccCC
Q 048393 16 RFWKIGLQTFTELVERMN-DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVN--KGLIKLPLTGDEVLLP 92 (369)
Q Consensus 16 ~~~~~~~~~l~~ll~~~~-~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p 92 (369)
...+...+.++++|++.. +++|||+|.++.|+.++|+++|||+++|++++++....+...+ ....+.+.+..++.+|
T Consensus 100 ~~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~iP 179 (491)
T PLN02534 100 DAVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSVSSDSEPFVVP 179 (491)
T ss_pred HHHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcccccCCCCCceeecC
Confidence 344567789999998642 7899999999999999999999999999999988876644322 1111222333456688
Q ss_pred CCCC---CCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-CCceeeeCccCCCccc
Q 048393 93 GLPP---LDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-HWLLRTIGPTLPSIYL 168 (369)
Q Consensus 93 g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-~~~~~~vGp~~~~~~~ 168 (369)
|+|. +...+++.++.... .+..+. .........++++++|||+|||+.+.+.+.+. +.+++.|||+.+....
T Consensus 180 g~p~~~~l~~~dlp~~~~~~~---~~~~~~-~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~ 255 (491)
T PLN02534 180 GMPQSIEITRAQLPGAFVSLP---DLDDVR-NKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKR 255 (491)
T ss_pred CCCccccccHHHCChhhcCcc---cHHHHH-HHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccc
Confidence 8873 56667776553221 122222 22222234577999999999999999888764 3579999999652100
Q ss_pred cccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCcc-----C-
Q 048393 169 DKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQ-----S- 242 (369)
Q Consensus 169 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-----~- 242 (369)
. .+...........+.++.+||+.++++++|||||||......+++.+++.+|+.++++|||+++.... .
T Consensus 256 ~----~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~ 331 (491)
T PLN02534 256 N----LDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEW 331 (491)
T ss_pred c----ccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhh
Confidence 0 00000000001113569999999988999999999999999999999999999999999999984311 1
Q ss_pred CCCcchhcccC-CCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEe
Q 048393 243 KLPENFSDETS-QKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKV 321 (369)
Q Consensus 243 ~~~~~~~~~~~-~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~ 321 (369)
.+|+++.++.. .++.+.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|+.+
T Consensus 332 ~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 332 LVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred cCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 25677776644 44555699999999999999999999999999999999999999999999999999999888999988
Q ss_pred cCC-------CC--C-CcCHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 322 PAD-------EK--G-IVRREAIAHCINEILE--GERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 322 ~~~-------~~--~-~~~~~~l~~~i~~~l~--~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
... +. + .+++++|.++|+++|. +++|+++|+||++|++++++|+.+||
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GG 471 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGG 471 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCC
Confidence 521 11 1 3799999999999997 46688999999999999999999998
No 16
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.2e-52 Score=403.75 Aligned_cols=340 Identities=28% Similarity=0.506 Sum_probs=262.5
Q ss_pred HHHHHHHHcHHHHHHHHHhc--------C-CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhc--cCcC
Q 048393 13 YVDRFWKIGLQTFTELVERM--------N-DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNK--GLIK 81 (369)
Q Consensus 13 ~~~~~~~~~~~~l~~ll~~~--------~-~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~--~~~~ 81 (369)
.+..+.+.+.+.++++++++ . +++|||+|.++.|+.++|+++|||++.|++++++.+.++.+... ...+
T Consensus 88 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~~~~ 167 (475)
T PLN02167 88 YILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTA 167 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhccccc
Confidence 33344455555666655432 1 35899999999999999999999999999999988887765432 1111
Q ss_pred --CCC--CCCcccCCCCC-CCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC--C-
Q 048393 82 --LPL--TGDEVLLPGLP-PLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ--H- 153 (369)
Q Consensus 82 --~~~--~~~~~~~pg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~--~- 153 (369)
.+. ...++.+||++ .++..+++.++..... ...+ .+.+....+++++++|||++||+++.+.+.+. +
T Consensus 168 ~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~~~----~~~~-~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~ 242 (475)
T PLN02167 168 SEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMKES----YEAW-VEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENY 242 (475)
T ss_pred cccccCCCCCeeECCCCCCCCChhhCchhhhCcch----HHHH-HHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccC
Confidence 111 12345689984 5777787765543211 2233 44445567789999999999999999888653 2
Q ss_pred CceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEE
Q 048393 154 WLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFL 233 (369)
Q Consensus 154 ~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i 233 (369)
.++++|||+.+.. .. .. .+ .....+.++.+||+.++++++|||||||+...+.+++++++.+|+.++++||
T Consensus 243 p~v~~vGpl~~~~---~~--~~--~~--~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~fl 313 (475)
T PLN02167 243 PPVYPVGPILSLK---DR--TS--PN--LDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFL 313 (475)
T ss_pred CeeEEeccccccc---cc--cC--CC--CCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEE
Confidence 3699999997531 00 00 00 0011146799999999888999999999988899999999999999999999
Q ss_pred EEEeCCc------cCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHH
Q 048393 234 WVVRESE------QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTN 307 (369)
Q Consensus 234 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~n 307 (369)
|+++... ...+|+++.++..+++++++|+||.+||+|+++++|||||||||++||+++|||||+||++.||+.|
T Consensus 314 w~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~n 393 (475)
T PLN02167 314 WSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLN 393 (475)
T ss_pred EEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhh
Confidence 9997531 1247888888888888999999999999999999999999999999999999999999999999999
Q ss_pred HHH-HHhhcCceEEecCC---C-CCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 308 AKY-IMDVGKMGLKVPAD---E-KGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 308 a~~-~~~~~g~g~~~~~~---~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
|++ +++. |+|+.+... + .+.+++++|.++|+++|.++ +.||+||+++++.+++|+++||
T Consensus 394 a~~~~~~~-g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~~~~~~~av~~gG 457 (475)
T PLN02167 394 AFTMVKEL-GLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGG 457 (475)
T ss_pred HHHHHHHh-CeeEEeecccccccCCcccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhCCC
Confidence 987 4555 999998632 0 12579999999999999754 2799999999999999999998
No 17
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=6.9e-52 Score=392.93 Aligned_cols=327 Identities=27% Similarity=0.461 Sum_probs=258.3
Q ss_pred HHHHHHHHcHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCCCCcccCC
Q 048393 13 YVDRFWKIGLQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLTGDEVLLP 92 (369)
Q Consensus 13 ~~~~~~~~~~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 92 (369)
++....+...++++++|+.. ++||||+|. +.|+.++|+++|||++.|++++++...++.. ..+.+ ...+|
T Consensus 88 ~~~~a~~~~~~~~~~~l~~~-~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~~~~-------~~~~p 157 (453)
T PLN02764 88 LLMSAMDLTRDQVEVVVRAV-EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-PGGEL-------GVPPP 157 (453)
T ss_pred HHHHHHHHhHHHHHHHHHhC-CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-ccccC-------CCCCC
Confidence 34444456779999999887 789999995 8999999999999999999999887777652 11111 12347
Q ss_pred CCCC----CCCCCCCCccCCC--CCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-CCceeeeCccCCC
Q 048393 93 GLPP----LDPQDTPSFINDP--ASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-HWLLRTIGPTLPS 165 (369)
Q Consensus 93 g~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-~~~~~~vGp~~~~ 165 (369)
|+|. ++.++++.+.... .....+...+ .+......+++++++|||+|||+++.+.+... +.+++.|||+++.
T Consensus 158 glp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~ 236 (453)
T PLN02764 158 GYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLL-ERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPE 236 (453)
T ss_pred CCCCCcccCcHhhCcchhhcCCCccchhHHHHH-HHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccC
Confidence 7763 4556666543211 1111233344 44445567788999999999999999998764 3469999999753
Q ss_pred ccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCC-----c
Q 048393 166 IYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRES-----E 240 (369)
Q Consensus 166 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~-----~ 240 (369)
. .+ . ...++++.+|||.++++++|||||||...++.+++.++..+|+.++.+|+|+++.. .
T Consensus 237 ~--~~---------~---~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~ 302 (453)
T PLN02764 237 P--DK---------T---RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTI 302 (453)
T ss_pred c--cc---------c---ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcch
Confidence 1 00 0 11256799999999999999999999999999999999999999999999999852 1
Q ss_pred cCCCCcchhcccCCCcEEE-eccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceE
Q 048393 241 QSKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGL 319 (369)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~-~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~ 319 (369)
...+|+++.++..++++++ +|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|+
T Consensus 303 ~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv 382 (453)
T PLN02764 303 QEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSV 382 (453)
T ss_pred hhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEE
Confidence 2358889988887777666 899999999999999999999999999999999999999999999999999976559999
Q ss_pred EecCCCCCCcCHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHH
Q 048393 320 KVPADEKGIVRREAIAHCINEILEG--ERGKEIKQNADKWRNFAKEA 364 (369)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~i~~~l~~--~~~~~~~~~a~~l~~~~~~~ 364 (369)
.+..++.+.+++++|+++|+++|++ ++|+++|++++++++.+++.
T Consensus 383 ~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~ 429 (453)
T PLN02764 383 EVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASP 429 (453)
T ss_pred EeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhc
Confidence 8854311258999999999999987 44788999999999988653
No 18
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=5.8e-51 Score=392.93 Aligned_cols=348 Identities=34% Similarity=0.604 Sum_probs=270.2
Q ss_pred CCHHHHHHHHHHHcHHHHHHHHHhcC-CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhc----cCcCC
Q 048393 8 ESNQAYVDRFWKIGLQTFTELVERMN-DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNK----GLIKL 82 (369)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~ll~~~~-~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~----~~~~~ 82 (369)
.++..++..+.+.+.+.+++++++.. ++||||+|.++.|+..+|+++|||++.|++++++....+.+... +..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~ 160 (459)
T PLN02448 81 ADFPGFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPV 160 (459)
T ss_pred cCHHHHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCC
Confidence 35666777777778889999998753 68999999999999999999999999999999877776655431 11121
Q ss_pred CC---CCCcc-cCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-CCcee
Q 048393 83 PL---TGDEV-LLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-HWLLR 157 (369)
Q Consensus 83 ~~---~~~~~-~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-~~~~~ 157 (369)
.. ...++ .+||++.+...+++.++... .....+.+ .+.+....+++.+++|||++||+.+.+.+.+. +++++
T Consensus 161 ~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~--~~~~~~~~-~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~ 237 (459)
T PLN02448 161 ELSESGEERVDYIPGLSSTRLSDLPPIFHGN--SRRVLKRI-LEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVY 237 (459)
T ss_pred ccccccCCccccCCCCCCCChHHCchhhcCC--chHHHHHH-HHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceE
Confidence 11 11112 37888777777887766432 12223344 55555566788999999999999888888664 35799
Q ss_pred eeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 048393 158 TIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVR 237 (369)
Q Consensus 158 ~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 237 (369)
.|||+.+.....+ ... +.. ....+.++.+|++.++++++|||||||....+.+++++++.+|+.++++|||++.
T Consensus 238 ~iGP~~~~~~~~~-~~~----~~~-~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~ 311 (459)
T PLN02448 238 PIGPSIPYMELKD-NSS----SSN-NEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVAR 311 (459)
T ss_pred EecCcccccccCC-Ccc----ccc-cccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEc
Confidence 9999976421100 000 000 0111357999999988889999999999888889999999999999999999876
Q ss_pred CCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCc
Q 048393 238 ESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKM 317 (369)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~ 317 (369)
... .++.+...+|+++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+
T Consensus 312 ~~~-----~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~ 386 (459)
T PLN02448 312 GEA-----SRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKI 386 (459)
T ss_pred Cch-----hhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCc
Confidence 421 123333446788999999999999999999999999999999999999999999999999999999996699
Q ss_pred eEEecCC--CCCCcCHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 318 GLKVPAD--EKGIVRREAIAHCINEILEG--ERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 318 g~~~~~~--~~~~~~~~~l~~~i~~~l~~--~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
|+.+... +.+.+++++|+++|+++|.+ ++|++||+||++|++++++|+.+||
T Consensus 387 G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gG 442 (459)
T PLN02448 387 GWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGG 442 (459)
T ss_pred eEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9998532 11257999999999999986 3578999999999999999999998
No 19
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=5.1e-51 Score=395.24 Aligned_cols=342 Identities=31% Similarity=0.534 Sum_probs=257.1
Q ss_pred HHHcHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccC-c-CCCCCCCcccCCCCC
Q 048393 18 WKIGLQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGL-I-KLPLTGDEVLLPGLP 95 (369)
Q Consensus 18 ~~~~~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~pg~~ 95 (369)
.+...+.+++++++. ++||||+|.++.|+..+|+++|||++.|++++++......+..... . ..+....++.+||+|
T Consensus 107 ~~~l~~~l~~~l~~~-~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~p 185 (482)
T PLN03007 107 TKYFKDQLEKLLETT-RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSEPFVIPDLP 185 (482)
T ss_pred HHHHHHHHHHHHhcC-CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccccCCCCceeeCCCCC
Confidence 356667777777766 8999999999999999999999999999999987766554333111 0 011111234477776
Q ss_pred C---CCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-CCceeeeCccCCCcccccc
Q 048393 96 P---LDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-HWLLRTIGPTLPSIYLDKQ 171 (369)
Q Consensus 96 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-~~~~~~vGp~~~~~~~~~~ 171 (369)
. +...+++.. .....+...+ ....+...+++++++||+++||+++.+.+.+. +.++++|||+.+... .
T Consensus 186 ~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~---~ 257 (482)
T PLN03007 186 GDIVITEEQINDA----DEESPMGKFM-KEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNR---G 257 (482)
T ss_pred CccccCHHhcCCC----CCchhHHHHH-HHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEcccccccc---c
Confidence 2 222333321 1112233334 44445567788999999999999888888764 246999999754310 0
Q ss_pred ccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCc-----cCCCCc
Q 048393 172 IEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESE-----QSKLPE 246 (369)
Q Consensus 172 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-----~~~~~~ 246 (369)
.......+... ...++++.+|++.++++++|||||||+...+..++.+++.+|+.++++|||+++... ...+|+
T Consensus 258 ~~~~~~~~~~~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~ 336 (482)
T PLN03007 258 FEEKAERGKKA-NIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPE 336 (482)
T ss_pred cccccccCCcc-ccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCH
Confidence 00000000000 111577999999988899999999999988889999999999999999999998632 124777
Q ss_pred chhcccC-CCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCC-
Q 048393 247 NFSDETS-QKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPAD- 324 (369)
Q Consensus 247 ~~~~~~~-~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~- 324 (369)
++.++.. .++.+.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.|++|+.+...
T Consensus 337 ~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~ 416 (482)
T PLN03007 337 GFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKK 416 (482)
T ss_pred HHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccc
Confidence 7776654 45566799999999999999999999999999999999999999999999999999988655777665311
Q ss_pred ----CCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 325 ----EKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 325 ----~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
+.+.+++++|+++|+++|.+++|++||+||+++++++++|+.+||
T Consensus 417 ~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gG 465 (482)
T PLN03007 417 LVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGG 465 (482)
T ss_pred ccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 112689999999999999998889999999999999999999998
No 20
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=6.9e-51 Score=387.89 Aligned_cols=321 Identities=23% Similarity=0.402 Sum_probs=249.5
Q ss_pred HHHHHHHcHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCCCCcccCCC
Q 048393 14 VDRFWKIGLQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLTGDEVLLPG 93 (369)
Q Consensus 14 ~~~~~~~~~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg 93 (369)
+....+...+.+++++++. ++||||+| ++.|+..+|+++|||++.|++++++... +.+...+.. ...+||
T Consensus 88 ~~~~~~~~~~~l~~~L~~~-~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~~~~-------~~~~pg 157 (442)
T PLN02208 88 LSEALDLTRDQVEAAVRAL-RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPGGKL-------GVPPPG 157 (442)
T ss_pred HHHHHHHHHHHHHHHHhhC-CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCcccc-------CCCCCC
Confidence 3344667788899999887 89999999 5799999999999999999999987653 333221111 123577
Q ss_pred CCC----CCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-CCceeeeCccCCCccc
Q 048393 94 LPP----LDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-HWLLRTIGPTLPSIYL 168 (369)
Q Consensus 94 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-~~~~~~vGp~~~~~~~ 168 (369)
+|. ++.++++.+ . .....+.... .+......+++++++|||+|||+++.+.+... +.+++.|||+.+..
T Consensus 158 lp~~~~~~~~~~~~~~-~--~~~~~~~~~~-~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~-- 231 (442)
T PLN02208 158 YPSSKVLFRENDAHAL-A--TLSIFYKRLY-HQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEP-- 231 (442)
T ss_pred CCCcccccCHHHcCcc-c--ccchHHHHHH-HHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCc--
Confidence 763 345566643 1 1112222222 33334566899999999999999999888654 35699999997531
Q ss_pred cccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCC-c----cCC
Q 048393 169 DKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRES-E----QSK 243 (369)
Q Consensus 169 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~-~----~~~ 243 (369)
. ..+++++++.+||+.++++++|||||||...++.+++.+++.+++.++.+++|+.... . ...
T Consensus 232 -----~-------~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~ 299 (442)
T PLN02208 232 -----D-------TSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEG 299 (442)
T ss_pred -----C-------CCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhh
Confidence 0 0022478899999999888999999999998899999999999888888888888743 1 134
Q ss_pred CCcchhcccCCC-cEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEec
Q 048393 244 LPENFSDETSQK-GLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVP 322 (369)
Q Consensus 244 ~~~~~~~~~~~~-~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~ 322 (369)
+|+++.++..++ +.+.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|+.++
T Consensus 300 lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~ 379 (442)
T PLN02208 300 LPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVS 379 (442)
T ss_pred CCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEec
Confidence 788887776554 4555999999999999999999999999999999999999999999999999999887449999997
Q ss_pred CCCCCCcCHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHH
Q 048393 323 ADEKGIVRREAIAHCINEILEGE--RGKEIKQNADKWRNFAK 362 (369)
Q Consensus 323 ~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~~~a~~l~~~~~ 362 (369)
..+++.+++++|+++|+++|.++ +|+++|++++++++.+.
T Consensus 380 ~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~ 421 (442)
T PLN02208 380 REKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV 421 (442)
T ss_pred cccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh
Confidence 54222489999999999999775 37889999999998874
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.4e-50 Score=386.23 Aligned_cols=324 Identities=23% Similarity=0.426 Sum_probs=254.3
Q ss_pred HHHHHHHcHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCCCCcccCCC
Q 048393 14 VDRFWKIGLQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLTGDEVLLPG 93 (369)
Q Consensus 14 ~~~~~~~~~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg 93 (369)
+....+...+.++++++.. ++||||+|. +.|+.++|+++|||++.|++++++...++.+.... ....+||
T Consensus 88 ~~~a~~~l~~~l~~~L~~~-~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~--------~~~~~pg 157 (446)
T PLN00414 88 IFDAMDLLRDQIEAKVRAL-KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAE--------LGFPPPD 157 (446)
T ss_pred HHHHHHHHHHHHHHHHhcC-CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhh--------cCCCCCC
Confidence 4444557778888888776 789999995 89999999999999999999999888776653211 0112466
Q ss_pred CCC----CCCCCC--CCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC-CCceeeeCccCCCc
Q 048393 94 LPP----LDPQDT--PSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ-HWLLRTIGPTLPSI 166 (369)
Q Consensus 94 ~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~-~~~~~~vGp~~~~~ 166 (369)
+|. +...+. +.++.. ....+ .+......+++++++|||+|||+.+.+.+.+. +.+++.|||+.+..
T Consensus 158 ~p~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~ 230 (446)
T PLN00414 158 YPLSKVALRGHDANVCSLFAN------SHELF-GLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEP 230 (446)
T ss_pred CCCCcCcCchhhcccchhhcc------cHHHH-HHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCc
Confidence 653 222221 222211 11234 44455566789999999999999999988764 34699999997531
Q ss_pred cccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCc-----c
Q 048393 167 YLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESE-----Q 241 (369)
Q Consensus 167 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-----~ 241 (369)
. . .+ + ....+++.+|||.+++++||||||||....+.+++.+++.+|+.++.+|+|++.... .
T Consensus 231 ~--~---~~---~----~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~ 298 (446)
T PLN00414 231 Q--N---KS---G----KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQ 298 (446)
T ss_pred c--c---cc---C----cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccch
Confidence 0 0 00 0 111456889999999999999999999999999999999999999999999997531 2
Q ss_pred CCCCcchhcccCCCcEEE-eccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEE
Q 048393 242 SKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLK 320 (369)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~-~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~ 320 (369)
..+|+++.++..++++++ +|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|+.
T Consensus 299 ~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~ 378 (446)
T PLN00414 299 EALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVK 378 (446)
T ss_pred hhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEE
Confidence 358889998888888876 8999999999999999999999999999999999999999999999999999755599999
Q ss_pred ecCCCCCCcCHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 321 VPADEKGIVRREAIAHCINEILEGE--RGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 321 ~~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
+..++.+.+++++|+++++++|.++ .|+++|++++++++.+ +++||
T Consensus 379 ~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~---~~~gg 426 (446)
T PLN00414 379 VQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETL---VSPGL 426 (446)
T ss_pred eccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH---HcCCC
Confidence 9653222589999999999999764 3688999999999886 35554
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=1.8e-42 Score=336.22 Aligned_cols=299 Identities=20% Similarity=0.275 Sum_probs=217.7
Q ss_pred HHHHHHHHH--hcCCCCEEEECCCcchHHHHHHHh-CCCcEEEcccchHHHHHHHHhhccCcCCCCCCCcccCCCCCCCC
Q 048393 22 LQTFTELVE--RMNDVDCIVYDSFLPWALDVAKKF-GLTGAAFLTQSCAVASIYHHVNKGLIKLPLTGDEVLLPGLPPLD 98 (369)
Q Consensus 22 ~~~l~~ll~--~~~~~D~vI~D~~~~~~~~~A~~l-giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~ 98 (369)
.+.+.++|+ +. +||++|+|.+..|+..+|+++ ++|.|.+++........ ...+..|.++ .++|.+ ...
T Consensus 123 ~~~~~~~L~~~~~-kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~---~~~gg~p~~~----syvP~~-~~~ 193 (507)
T PHA03392 123 LPNVKNLIANKNN-KFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENF---ETMGAVSRHP----VYYPNL-WRS 193 (507)
T ss_pred CHHHHHHHhcCCC-ceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHH---HhhccCCCCC----eeeCCc-ccC
Confidence 456677776 33 899999999999999999999 99988887765322211 1122123222 334443 234
Q ss_pred CCCCCCccCCCCCchh--------------HHHHHHHHHhh--------ccccccEEEecchHhhhHHHHHHHhcCCCce
Q 048393 99 PQDTPSFINDPASYPA--------------FFDMIVTRQFY--------NIDKADWILCNTFYELEKEVTEWLGKQHWLL 156 (369)
Q Consensus 99 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~--------~~~~~~~~li~s~~ele~~~~~~~~~~~~~~ 156 (369)
..+.|.|++|..+.-. ..+.. .+.+. ...+.+++++|+.+.++.
T Consensus 194 ~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~-~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~------------- 259 (507)
T PHA03392 194 KFGNLNVWETINEIYTELRLYNEFSLLADEQNKLL-KQQFGPDTPTIRELRNRVQLLFVNVHPVFDN------------- 259 (507)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-HHHcCCCCCCHHHHHhCCcEEEEecCccccC-------------
Confidence 4567777776544211 01111 11110 112234556666555553
Q ss_pred eeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCcccc---CCHHHHHHHHHHHHhCCCcEE
Q 048393 157 RTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMAT---LKMEQMEELAWGLKASDKYFL 233 (369)
Q Consensus 157 ~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~---~~~~~~~~~~~~l~~~~~~~i 233 (369)
..|+.+++++.|++..+.. ..+++++++.+|++.. ++++|||||||... .+.+.++.++++++..+++||
T Consensus 260 --~rp~~p~v~~vGgi~~~~~----~~~~l~~~l~~fl~~~-~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~vi 332 (507)
T PHA03392 260 --NRPVPPSVQYLGGLHLHKK----PPQPLDDYLEEFLNNS-TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVL 332 (507)
T ss_pred --CCCCCCCeeeecccccCCC----CCCCCCHHHHHHHhcC-CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEE
Confidence 3344444444443322110 1245689999999976 45799999999863 467889999999999999999
Q ss_pred EEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHh
Q 048393 234 WVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMD 313 (369)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~ 313 (369)
|+++..... ...++|+++.+|+||.+||+|+.+++||||||.||++||+++|||+|++|++.||+.||+++++
T Consensus 333 w~~~~~~~~-------~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~ 405 (507)
T PHA03392 333 WKYDGEVEA-------INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE 405 (507)
T ss_pred EEECCCcCc-------ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHH
Confidence 998754221 1235688999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 048393 314 VGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEA 364 (369)
Q Consensus 314 ~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~ 364 (369)
+ |+|+.++.. .+++++|.++|+++++|+ +|++||+++++.+++.
T Consensus 406 ~-G~G~~l~~~---~~t~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~ 449 (507)
T PHA03392 406 L-GIGRALDTV---TVSAAQLVLAIVDVIENP---KYRKNLKELRHLIRHQ 449 (507)
T ss_pred c-CcEEEeccC---CcCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhC
Confidence 9 999999987 789999999999999999 9999999999999864
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=4.6e-43 Score=344.64 Aligned_cols=301 Identities=27% Similarity=0.388 Sum_probs=202.4
Q ss_pred CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCCCCcccCCCCCCCCCCCCCCccCCCCCch
Q 048393 34 DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLTGDEVLLPGLPPLDPQDTPSFINDPASYP 113 (369)
Q Consensus 34 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~ 113 (369)
++|++|+|.+..|+..+|+.+++|.+.+.+...... ........+.++ .++|.. .....+.+.+.+|..+.-
T Consensus 119 ~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~---~~~~~~g~p~~p----syvP~~-~s~~~~~msf~~Ri~N~l 190 (500)
T PF00201_consen 119 KFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYD---LSSFSGGVPSPP----SYVPSM-FSDFSDRMSFWQRIKNFL 190 (500)
T ss_dssp HHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSC---CTCCTSCCCTST----TSTTCB-CCCSGTTSSSST--TTSH
T ss_pred ccccceEeeccchhHHHHHHhcCCeEEEecccccch---hhhhccCCCCCh----HHhccc-cccCCCccchhhhhhhhh
Confidence 899999999999999999999999987544331100 000011112222 223332 123446677777665543
Q ss_pred hH--HHHHHHHHhh-cccccc-EEEe--cchHhhhHHHHHHHhcCCCceeeeCccCCCccccccccccccccccccccCh
Q 048393 114 AF--FDMIVTRQFY-NIDKAD-WILC--NTFYELEKEVTEWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNI 187 (369)
Q Consensus 114 ~~--~~~~~~~~~~-~~~~~~-~~li--~s~~ele~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~ 187 (369)
.. .... .+... ...+.. .... .+..++.......+-+.++.+.++.|+.|++.+.|+++.+.. ++++
T Consensus 191 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~prp~~p~v~~vGgl~~~~~------~~l~ 263 (500)
T PF00201_consen 191 FYLYFRFI-FRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLDFPRPLLPNVVEVGGLHIKPA------KPLP 263 (500)
T ss_dssp HHHHHHHH-HHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE----HHHHCTSTTGCGC-S----------TCH
T ss_pred hhhhhccc-cccchhhHHHHHhhhcccccccHHHHHHHHHHhhhccccCcCCcchhhcccccCccccccc------cccc
Confidence 21 1222 12111 111111 1111 122333333444555655667778899999888888765432 5679
Q ss_pred hHHHHHhccCCCCceEEEEeCccccC-CHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHH
Q 048393 188 ESCMKWLNDRANGSVVYVSFGSMATL-KMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLG 266 (369)
Q Consensus 188 ~~~~~~l~~~~~~~~i~vs~Gs~~~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 266 (369)
+++.+|++...++++|||||||+... +.+..++++++|++.+++|||++....... .++|+++.+|+||.+
T Consensus 264 ~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~~--------l~~n~~~~~W~PQ~~ 335 (500)
T PF00201_consen 264 EELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEPPEN--------LPKNVLIVKWLPQND 335 (500)
T ss_dssp HHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSHGCH--------HHTTEEEESS--HHH
T ss_pred cccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCccccccccccccc--------ccceEEEeccccchh
Confidence 99999999755788999999999753 444588999999999999999997732222 335789999999999
Q ss_pred hhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 267 VLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 267 iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
||+|+++++||||||+||++||+++|||||++|+++||+.||+++++. |+|+.++.. ++|+++|.++|+++|+|+
T Consensus 336 lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~~~---~~~~~~l~~ai~~vl~~~- 410 (500)
T PF00201_consen 336 LLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLDKN---DLTEEELRAAIREVLENP- 410 (500)
T ss_dssp HHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEGGG---C-SHHHHHHHHHHHHHSH-
T ss_pred hhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEE-eeEEEEEec---CCcHHHHHHHHHHHHhhh-
Confidence 999999999999999999999999999999999999999999999999 999999987 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 048393 347 GKEIKQNADKWRNFAKEA 364 (369)
Q Consensus 347 ~~~~~~~a~~l~~~~~~~ 364 (369)
+|++||++++++++..
T Consensus 411 --~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 411 --SYKENAKRLSSLFRDR 426 (500)
T ss_dssp --HHHHHHHHHHHTTT--
T ss_pred --HHHHHHHHHHHHHhcC
Confidence 9999999999998864
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=1.4e-34 Score=284.34 Aligned_cols=294 Identities=29% Similarity=0.383 Sum_probs=193.7
Q ss_pred CCCEEEECCCcchHHHHHHHhC-CCcEEEcccchHHHHHHHHhhccCcCCCCCCCcccCCCCCCCCCCCCCCccCCCCCc
Q 048393 34 DVDCIVYDSFLPWALDVAKKFG-LTGAAFLTQSCAVASIYHHVNKGLIKLPLTGDEVLLPGLPPLDPQDTPSFINDPASY 112 (369)
Q Consensus 34 ~~D~vI~D~~~~~~~~~A~~lg-iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~~~~~~~~~~~ 112 (369)
++|++|+|.+..|...+|.... ++..++.+.++....+..+.... .+|........+.+.+..+..+.
T Consensus 114 ~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~-----------~~p~~~~~~~~~~~~~~~~~~n~ 182 (496)
T KOG1192|consen 114 KFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLS-----------YVPSPFSLSSGDDMSFPERVPNL 182 (496)
T ss_pred CccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCccc-----------ccCcccCccccccCcHHHHHHHH
Confidence 4999999998878888887775 99888888775554332221111 12211100110222232221110
Q ss_pred h--hHHH-------------HHHHHHhhcc----ccccEEEecc-hHhhhHHHHHHHhcC--CCceeeeCccCCCccccc
Q 048393 113 P--AFFD-------------MIVTRQFYNI----DKADWILCNT-FYELEKEVTEWLGKQ--HWLLRTIGPTLPSIYLDK 170 (369)
Q Consensus 113 ~--~~~~-------------~~~~~~~~~~----~~~~~~li~s-~~ele~~~~~~~~~~--~~~~~~vGp~~~~~~~~~ 170 (369)
. .+.. .. ....... .....++.++ +..++.+....++.. ..+++++||+...-
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~---- 257 (496)
T KOG1192|consen 183 IKKDLPSFLFSLSDDRKQDKIS-KELLGDILNWKPTASGIIVNASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKD---- 257 (496)
T ss_pred HHHHHHHHHHHHhhhHHHHHHH-HHhCCCcccccccHHHhhhcCeEEEEccCcccCCCCCCCCCCceEECcEEecC----
Confidence 0 0000 00 1110000 1111233333 444444333233221 24588888876540
Q ss_pred cccccccccccccccChhHHHHHhccCCCC--ceEEEEeCccc---cCCHHHHHHHHHHHHhC-CCcEEEEEeCCccCCC
Q 048393 171 QIEDDKEYGFSIFETNIESCMKWLNDRANG--SVVYVSFGSMA---TLKMEQMEELAWGLKAS-DKYFLWVVRESEQSKL 244 (369)
Q Consensus 171 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~--~~i~vs~Gs~~---~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~ 244 (369)
. +.......+|++..+.. ++|||||||+. .++.++..+++.+|+.. ++.|+|++.......+
T Consensus 258 ------~------~~~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~ 325 (496)
T KOG1192|consen 258 ------S------KQKSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYF 325 (496)
T ss_pred ------c------cccccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhh
Confidence 0 00011345566655444 89999999998 78999999999999999 8889999987543223
Q ss_pred CcchhcccCCCcEEEeccChHHh-hcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecC
Q 048393 245 PENFSDETSQKGLVVNWCPQLGV-LAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPA 323 (369)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~p~~~i-L~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~ 323 (369)
++++.++.++|+...+|+||.++ |.|+++++||||||+||++|++++|||||++|+++||+.||+++++. |.|..+.+
T Consensus 326 ~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~-g~~~v~~~ 404 (496)
T KOG1192|consen 326 PEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRH-GGGGVLDK 404 (496)
T ss_pred hhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhC-CCEEEEeh
Confidence 33332222457788899999998 59999999999999999999999999999999999999999999999 66666655
Q ss_pred CCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 048393 324 DEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAK 362 (369)
Q Consensus 324 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 362 (369)
. +++.+.+.+++.++++++ +|+++++++++..+
T Consensus 405 ~---~~~~~~~~~~~~~il~~~---~y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 405 R---DLVSEELLEAIKEILENE---EYKEAAKRLSEILR 437 (496)
T ss_pred h---hcCcHHHHHHHHHHHcCh---HHHHHHHHHHHHHH
Confidence 4 466666999999999999 99999999999876
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=1.3e-31 Score=255.48 Aligned_cols=299 Identities=21% Similarity=0.231 Sum_probs=198.0
Q ss_pred CHHHHHHHHHHHcHHHHHHHH---HhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCC
Q 048393 9 SNQAYVDRFWKIGLQTFTELV---ERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLT 85 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll---~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (369)
++..+++.+.......+.+++ ++. ++|+||+|.+++++..+|+++|||+|.+++..... ...+ ..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~---------~~~~--~~ 132 (392)
T TIGR01426 65 EPIDIIEKLLDEAEDVLPQLEEAYKGD-RPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN---------EEFE--EM 132 (392)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCC-CCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc---------cccc--cc
Confidence 344455555555444444444 344 89999999998999999999999999875443110 0000 00
Q ss_pred CCcccCCCCCCCCCCCCCCccCCCCCc-hhHHHHHHHHHh-h-----c--cccccEEEecchHhhhHHHHHHHhcCCCce
Q 048393 86 GDEVLLPGLPPLDPQDTPSFINDPASY-PAFFDMIVTRQF-Y-----N--IDKADWILCNTFYELEKEVTEWLGKQHWLL 156 (369)
Q Consensus 86 ~~~~~~pg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-----~--~~~~~~~li~s~~ele~~~~~~~~~~~~~~ 156 (369)
..+. .+.+ ......... ..... ..+...+ .+.. . . ....+..+..+.+.|++. ...++ .++
T Consensus 133 ~~~~-~~~~--~~~~~~~~~--~~~~~~~~~~~~r-~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~-~~~~~---~~~ 202 (392)
T TIGR01426 133 VSPA-GEGS--AEEGAIAER--GLAEYVARLSALL-EEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA-GETFD---DSF 202 (392)
T ss_pred cccc-chhh--hhhhccccc--hhHHHHHHHHHHH-HHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC-ccccC---CCe
Confidence 0000 0000 000000000 00000 0111111 1100 0 0 011223455555555542 11222 238
Q ss_pred eeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEE
Q 048393 157 RTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVV 236 (369)
Q Consensus 157 ~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~ 236 (369)
+++||+.+. +.+...|....+++++|||++||+.......++.+++++.+.+.+++|..
T Consensus 203 ~~~Gp~~~~---------------------~~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 261 (392)
T TIGR01426 203 TFVGPCIGD---------------------RKEDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSV 261 (392)
T ss_pred EEECCCCCC---------------------ccccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEE
Confidence 899997653 01112366555678899999999876666688889999999999999988
Q ss_pred eCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcC
Q 048393 237 RESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGK 316 (369)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g 316 (369)
+..... .. ....++|+.+.+|+||.++|+++++ +|||||+||++||+++|+|+|++|...||..||+++++. |
T Consensus 262 g~~~~~---~~-~~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~-g 334 (392)
T TIGR01426 262 GRGVDP---AD-LGELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL-G 334 (392)
T ss_pred CCCCCh---hH-hccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHC-C
Confidence 754211 11 1123467899999999999999998 999999999999999999999999999999999999999 9
Q ss_pred ceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 048393 317 MGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKE 363 (369)
Q Consensus 317 ~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 363 (369)
+|+.+... .+++++|.++|+++++|+ +|+++++++++.+++
T Consensus 335 ~g~~l~~~---~~~~~~l~~ai~~~l~~~---~~~~~~~~l~~~~~~ 375 (392)
T TIGR01426 335 LGRHLPPE---EVTAEKLREAVLAVLSDP---RYAERLRKMRAEIRE 375 (392)
T ss_pred CEEEeccc---cCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHH
Confidence 99999876 789999999999999998 899999999998875
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.97 E-value=4.3e-29 Score=238.98 Aligned_cols=158 Identities=20% Similarity=0.229 Sum_probs=132.6
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCH-HHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKM-EQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL 265 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~-~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 265 (369)
+.++..|++. ++++|||++||+..... ..+..+++++...+.++||+++...... ...++|+++.+|+||.
T Consensus 228 ~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~------~~~~~~v~~~~~~p~~ 299 (401)
T cd03784 228 PPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGA------EDLPDNVRVVDFVPHD 299 (401)
T ss_pred CHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccc------cCCCCceEEeCCCCHH
Confidence 5677788864 46799999999986544 4578889999888999999988653221 1235688999999999
Q ss_pred HhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
++|.++++ ||||||+||++||+++|||+|++|+..||+.||+++++. |+|+.+... .++.++|.++|+++++++
T Consensus 300 ~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~-G~g~~l~~~---~~~~~~l~~al~~~l~~~ 373 (401)
T cd03784 300 WLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAEL-GAGPALDPR---ELTAERLAAALRRLLDPP 373 (401)
T ss_pred HHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHC-CCCCCCCcc---cCCHHHHHHHHHHHhCHH
Confidence 99999999 999999999999999999999999999999999999999 999999876 689999999999999865
Q ss_pred cHHHHHHHHHHHHHHHH
Q 048393 346 RGKEIKQNADKWRNFAK 362 (369)
Q Consensus 346 ~~~~~~~~a~~l~~~~~ 362 (369)
++++++++++.++
T Consensus 374 ----~~~~~~~~~~~~~ 386 (401)
T cd03784 374 ----SRRRAAALLRRIR 386 (401)
T ss_pred ----HHHHHHHHHHHHH
Confidence 4555666655553
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-28 Score=230.63 Aligned_cols=152 Identities=25% Similarity=0.418 Sum_probs=136.8
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCcee
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFL 277 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I 277 (369)
.++++||+|+||.... .+.++.+++++...+.+||...+.. ...+ ...++|+++.+|+||.++|.++++ ||
T Consensus 235 ~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~~~~-----~~~p~n~~v~~~~p~~~~l~~ad~--vI 305 (406)
T COG1819 235 ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-RDTL-----VNVPDNVIVADYVPQLELLPRADA--VI 305 (406)
T ss_pred CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-cccc-----ccCCCceEEecCCCHHHHhhhcCE--EE
Confidence 4677999999999976 7889999999999999999998762 1111 123467899999999999999999 99
Q ss_pred ecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 048393 278 THCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKW 357 (369)
Q Consensus 278 ~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l 357 (369)
||||+||++|||++|||+|++|...||+.||.++++. |+|..+... .++++.|+++|+++|.|+ .|+++++++
T Consensus 306 ~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~-G~G~~l~~~---~l~~~~l~~av~~vL~~~---~~~~~~~~~ 378 (406)
T COG1819 306 HHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-GAGIALPFE---ELTEERLRAAVNEVLADD---SYRRAAERL 378 (406)
T ss_pred ecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHc-CCceecCcc---cCCHHHHHHHHHHHhcCH---HHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999987 789999999999999999 999999999
Q ss_pred HHHHHHHH
Q 048393 358 RNFAKEAV 365 (369)
Q Consensus 358 ~~~~~~~~ 365 (369)
++.+++..
T Consensus 379 ~~~~~~~~ 386 (406)
T COG1819 379 AEEFKEED 386 (406)
T ss_pred HHHhhhcc
Confidence 99998753
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.80 E-value=6.2e-18 Score=158.28 Aligned_cols=149 Identities=17% Similarity=0.191 Sum_probs=113.2
Q ss_pred ccCCCCceEEEEeCccccCCHHH-HHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEecc-ChH-Hhhccc
Q 048393 195 NDRANGSVVYVSFGSMATLKMEQ-MEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWC-PQL-GVLAHE 271 (369)
Q Consensus 195 ~~~~~~~~i~vs~Gs~~~~~~~~-~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~-~iL~~~ 271 (369)
...+++++|+|..||.+....+. +.+++..+. .+.+++|++|......... . ..+..+.+|+ ++. ++|+++
T Consensus 180 ~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~~~~~~~----~-~~~~~~~~f~~~~m~~~~~~a 253 (352)
T PRK12446 180 GFSRKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGNLDDSLQ----N-KEGYRQFEYVHGELPDILAIT 253 (352)
T ss_pred CCCCCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCchHHHHHh----h-cCCcEEecchhhhHHHHHHhC
Confidence 33456779999999999766644 445555553 2488999998753211000 0 1234566777 545 899999
Q ss_pred CcCceeecCChhhHHHHHhhCCceeecCCC-----CChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 272 ATGCFLTHCGWNSTMEALGLGVPMLAMPQW-----SDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 272 ~~~~~I~hgG~~s~~eal~~GvP~i~~P~~-----~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
|+ +|||||.+|+.|++++|+|+|++|+. .||..||+.+++. |+|..+... +++++.|.+++.++++|++
T Consensus 254 dl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~-g~~~~l~~~---~~~~~~l~~~l~~ll~~~~ 327 (352)
T PRK12446 254 DF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQ-GYASVLYEE---DVTVNSLIKHVEELSHNNE 327 (352)
T ss_pred CE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHC-CCEEEcchh---cCCHHHHHHHHHHHHcCHH
Confidence 99 99999999999999999999999985 4899999999999 999999876 7899999999999998752
Q ss_pred HHHHHHHHHHH
Q 048393 347 GKEIKQNADKW 357 (369)
Q Consensus 347 ~~~~~~~a~~l 357 (369)
.++++++++
T Consensus 328 --~~~~~~~~~ 336 (352)
T PRK12446 328 --KYKTALKKY 336 (352)
T ss_pred --HHHHHHHHc
Confidence 455555443
No 29
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.77 E-value=2e-17 Score=153.46 Aligned_cols=122 Identities=21% Similarity=0.338 Sum_probs=98.3
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCC-CcEEEEEeCCccCCCCcchhcccCCCcEEEecc-C-hHHhhcccCcCc
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASD-KYFLWVVRESEQSKLPENFSDETSQKGLVVNWC-P-QLGVLAHEATGC 275 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p-~~~iL~~~~~~~ 275 (369)
+++.|+|++|+.... .+++.++..+ ..+++. +...... ..+|+.+..+. + ..++|+.+++
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~~~--------~~~ni~~~~~~~~~~~~~m~~ad~-- 253 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAADP--------RPGNIHVRPFSTPDFAELMAAADL-- 253 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcccc--------cCCCEEEeecChHHHHHHHHhCCE--
Confidence 455899999998642 5567777666 566655 5442111 13678888876 3 3489999999
Q ss_pred eeecCChhhHHHHHhhCCceeecCC--CCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHH
Q 048393 276 FLTHCGWNSTMEALGLGVPMLAMPQ--WSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEI 341 (369)
Q Consensus 276 ~I~hgG~~s~~eal~~GvP~i~~P~--~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~ 341 (369)
+|||||+||++|++++|+|+|++|. +.||..||+.+++. |+|+.++.+ +++++.|.++|+++
T Consensus 254 vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~-G~~~~~~~~---~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 254 VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEEL-GLGIVLSQE---DLTPERLAEFLERL 317 (318)
T ss_pred EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEcccc---cCCHHHHHHHHhcC
Confidence 9999999999999999999999999 78999999999999 999999877 79999999998764
No 30
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.75 E-value=5.7e-17 Score=150.40 Aligned_cols=149 Identities=20% Similarity=0.272 Sum_probs=118.7
Q ss_pred CCceEEEEeCccccCCHHH-HHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCC-cEEEeccChH-HhhcccCcCc
Q 048393 199 NGSVVYVSFGSMATLKMEQ-MEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQK-GLVVNWCPQL-GVLAHEATGC 275 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~-~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~-~iL~~~~~~~ 275 (369)
++++|+|..||++....+. +.++...+.+ +..+++.++........... ...+ +.+.+|..++ .+|+.+|+
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~~~~~~~~~---~~~~~~~v~~f~~dm~~~~~~ADL-- 255 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKNDLEELKSAY---NELGVVRVLPFIDDMAALLAAADL-- 255 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcchHHHHHHHH---hhcCcEEEeeHHhhHHHHHHhccE--
Confidence 5779999999999755554 4555555554 68899988876322111111 1112 6777898877 89999999
Q ss_pred eeecCChhhHHHHHhhCCceeecCCC----CChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-HHH
Q 048393 276 FLTHCGWNSTMEALGLGVPMLAMPQW----SDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-KEI 350 (369)
Q Consensus 276 ~I~hgG~~s~~eal~~GvP~i~~P~~----~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~ 350 (369)
+||++|++|+.|++++|+|+|.+|+. .||..||+.+++. |.|+.++.. ++|.+++.+.|.+++++++. ..|
T Consensus 256 vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-gaa~~i~~~---~lt~~~l~~~i~~l~~~~~~l~~m 331 (357)
T COG0707 256 VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-GAALVIRQS---ELTPEKLAELILRLLSNPEKLKAM 331 (357)
T ss_pred EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-CCEEEeccc---cCCHHHHHHHHHHHhcCHHHHHHH
Confidence 99999999999999999999999974 4899999999999 999999988 79999999999999998655 778
Q ss_pred HHHHHHH
Q 048393 351 KQNADKW 357 (369)
Q Consensus 351 ~~~a~~l 357 (369)
+++++.+
T Consensus 332 ~~~a~~~ 338 (357)
T COG0707 332 AENAKKL 338 (357)
T ss_pred HHHHHhc
Confidence 7777765
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.69 E-value=1.3e-15 Score=141.26 Aligned_cols=125 Identities=18% Similarity=0.224 Sum_probs=91.1
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccC-h-HHhhcccCcCce
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCP-Q-LGVLAHEATGCF 276 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~-~~iL~~~~~~~~ 276 (369)
+++.|+|++|+... +.+++.+...+. +.++++..+. ..+ ..++|+.+.+|.| + .++|..+++ +
T Consensus 187 ~~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~~~--~~~----~~~~~v~~~~~~~~~~~~~l~~ad~--v 251 (321)
T TIGR00661 187 GEDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSYEV--AKN----SYNENVEIRRITTDNFKELIKNAEL--V 251 (321)
T ss_pred CCCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCCCC--Ccc----ccCCCEEEEECChHHHHHHHHhCCE--E
Confidence 34578888888643 345666766553 2333332211 111 1246788889997 3 378899988 9
Q ss_pred eecCChhhHHHHHhhCCceeecCCCC--ChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 277 LTHCGWNSTMEALGLGVPMLAMPQWS--DQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 277 I~hgG~~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
|||||++|++||+++|+|+|++|... ||..||+.+++. |+|+.++.. ++ ++.+++.++++|+
T Consensus 252 I~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~~---~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 252 ITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEYK---EL---RLLEAILDIRNMK 315 (321)
T ss_pred EECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcChh---hH---HHHHHHHhccccc
Confidence 99999999999999999999999855 899999999999 999999865 34 5566666677776
No 32
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.66 E-value=1.2e-17 Score=140.14 Aligned_cols=137 Identities=18% Similarity=0.249 Sum_probs=100.0
Q ss_pred eEEEEeCccccCCHHH-HHHHHHHHHh--CCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccC-hHHhhcccCcCcee
Q 048393 202 VVYVSFGSMATLKMEQ-MEELAWGLKA--SDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCP-QLGVLAHEATGCFL 277 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~-~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~iL~~~~~~~~I 277 (369)
+|+|++||.+...... +..+...+.. ....+++++|..........+ .+...++.+.+|.+ ..++++.+|+ +|
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~-~~~~~~v~~~~~~~~m~~~m~~aDl--vI 77 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKV-ENFNPNVKVFGFVDNMAELMAAADL--VI 77 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCH-CCTTCCCEEECSSSSHHHHHHHHSE--EE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHH-hccCCcEEEEechhhHHHHHHHcCE--EE
Confidence 5899999987532222 3333333333 257888888876332222221 11225789999999 5599999999 99
Q ss_pred ecCChhhHHHHHhhCCceeecCCCC----ChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 278 THCGWNSTMEALGLGVPMLAMPQWS----DQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 278 ~hgG~~s~~eal~~GvP~i~~P~~~----dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
||||.+|++|++++|+|+|++|... +|..||..+++. |+|+.+... ..+.+.|.++|.+++.++
T Consensus 78 s~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~~---~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 78 SHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDES---ELNPEELAEAIEELLSDP 145 (167)
T ss_dssp ECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSECC---C-SCCCHHHHHHCHCCCH
T ss_pred eCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCcc---cCCHHHHHHHHHHHHcCc
Confidence 9999999999999999999999988 999999999999 999999876 678999999999999887
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.53 E-value=2.2e-12 Score=121.17 Aligned_cols=154 Identities=16% Similarity=0.220 Sum_probs=107.4
Q ss_pred CCCceEEEEeCccccCCH-HHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccC-hHHhhcccCcCc
Q 048393 198 ANGSVVYVSFGSMATLKM-EQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCP-QLGVLAHEATGC 275 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~-~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~iL~~~~~~~ 275 (369)
+++.+|++..|+...... +.+.+.+..+...+..+++.+|......+.+...+ ..+|+.+.+|+. ..++|+.+++
T Consensus 179 ~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~~~~l~~~~~~-~~~~v~~~g~~~~~~~~l~~ad~-- 255 (350)
T cd03785 179 PGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGDLEEVKKAYEE-LGVNYEVFPFIDDMAAAYAAADL-- 255 (350)
T ss_pred CCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCccHHHHHHHHhc-cCCCeEEeehhhhHHHHHHhcCE--
Confidence 345567776777653221 12333444444344556667766532222221111 136788889884 4489999999
Q ss_pred eeecCChhhHHHHHhhCCceeecCC----CCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-HHH
Q 048393 276 FLTHCGWNSTMEALGLGVPMLAMPQ----WSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-KEI 350 (369)
Q Consensus 276 ~I~hgG~~s~~eal~~GvP~i~~P~----~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~ 350 (369)
+|+++|.+++.||+++|+|+|+.|. ..+|..|++.+.+. |.|+.++.. +.+.+++.++|+++++|++. +.+
T Consensus 256 ~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-g~g~~v~~~---~~~~~~l~~~i~~ll~~~~~~~~~ 331 (350)
T cd03785 256 VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA-GAAVLIPQE---ELTPERLAAALLELLSDPERLKAM 331 (350)
T ss_pred EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-CCEEEEecC---CCCHHHHHHHHHHHhcCHHHHHHH
Confidence 9999999999999999999999985 46899999999999 999999865 56899999999999988743 556
Q ss_pred HHHHHHHH
Q 048393 351 KQNADKWR 358 (369)
Q Consensus 351 ~~~a~~l~ 358 (369)
.+++++..
T Consensus 332 ~~~~~~~~ 339 (350)
T cd03785 332 AEAARSLA 339 (350)
T ss_pred HHHHHhcC
Confidence 66665543
No 34
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.50 E-value=3.3e-12 Score=121.80 Aligned_cols=147 Identities=13% Similarity=0.262 Sum_probs=106.9
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHH-h-CCCcEEEEEeCCccCCCCcchhc--ccCCCcEEEeccChH-HhhcccC
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLK-A-SDKYFLWVVRESEQSKLPENFSD--ETSQKGLVVNWCPQL-GVLAHEA 272 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~-~-~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~-~iL~~~~ 272 (369)
+++++|++..|+.+.. ..+..+++++. . .+.++++..|.+.. +.+.+.. ...+++.+.+|+++. ++++.+|
T Consensus 200 ~~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~~~--l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aD 275 (391)
T PRK13608 200 PDKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKSKE--LKRSLTAKFKSNENVLILGYTKHMNEWMASSQ 275 (391)
T ss_pred CCCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCCHH--HHHHHHHHhccCCCeEEEeccchHHHHHHhhh
Confidence 4566888989988731 23444444432 2 34567666665421 1111111 123467888999776 8999999
Q ss_pred cCceeecCChhhHHHHHhhCCceeec-CCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-HHH
Q 048393 273 TGCFLTHCGWNSTMEALGLGVPMLAM-PQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-KEI 350 (369)
Q Consensus 273 ~~~~I~hgG~~s~~eal~~GvP~i~~-P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~ 350 (369)
+ +|+.+|..|+.||+++|+|+|+. |..++|..|+..+++. |+|+... +.+++.++|.++++|++. +.|
T Consensus 276 l--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~-------~~~~l~~~i~~ll~~~~~~~~m 345 (391)
T PRK13608 276 L--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD-------TPEEAIKIVASLTNGNEQLTNM 345 (391)
T ss_pred E--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC-------CHHHHHHHHHHHhcCHHHHHHH
Confidence 9 99999999999999999999998 7777788999999999 9998754 678899999999988754 677
Q ss_pred HHHHHHHH
Q 048393 351 KQNADKWR 358 (369)
Q Consensus 351 ~~~a~~l~ 358 (369)
++|+++++
T Consensus 346 ~~~~~~~~ 353 (391)
T PRK13608 346 ISTMEQDK 353 (391)
T ss_pred HHHHHHhc
Confidence 77776654
No 35
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.49 E-value=1.3e-11 Score=117.35 Aligned_cols=158 Identities=16% Similarity=0.158 Sum_probs=106.9
Q ss_pred hHHHHHhccCCCCceEEEEeCccccCCHHH-HHHHHHHHH-----hCCCcEEEEEeCCccCCCCcchhcc-cCCCcEEEe
Q 048393 188 ESCMKWLNDRANGSVVYVSFGSMATLKMEQ-MEELAWGLK-----ASDKYFLWVVRESEQSKLPENFSDE-TSQKGLVVN 260 (369)
Q Consensus 188 ~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~-~~~~~~~l~-----~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 260 (369)
+.+.+-+...+++++|++..|+.+...... ++++...+. ..+..+++.+|.+.. +.+.+.+. ...++.+.+
T Consensus 194 ~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~--~~~~L~~~~~~~~v~~~G 271 (382)
T PLN02605 194 DELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK--LQSKLESRDWKIPVKVRG 271 (382)
T ss_pred HHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH--HHHHHHhhcccCCeEEEe
Confidence 334444444455668888777776544333 333333221 234566777775421 11111111 124577889
Q ss_pred ccChH-HhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChh-HHHHHHHhhcCceEEecCCCCCCcCHHHHHHHH
Q 048393 261 WCPQL-GVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQS-TNAKYIMDVGKMGLKVPADEKGIVRREAIAHCI 338 (369)
Q Consensus 261 ~~p~~-~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~-~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i 338 (369)
|+++. ++++.+|+ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+.+. |.|+.+. +++.|.++|
T Consensus 272 ~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~~-------~~~~la~~i 341 (382)
T PLN02605 272 FVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFSE-------SPKEIARIV 341 (382)
T ss_pred ccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-CceeecC-------CHHHHHHHH
Confidence 99877 89999999 999999999999999999999988655554 799999999 9997652 789999999
Q ss_pred HHHhcC-CcH-HHHHHHHHHH
Q 048393 339 NEILEG-ERG-KEIKQNADKW 357 (369)
Q Consensus 339 ~~~l~~-~~~-~~~~~~a~~l 357 (369)
.++++| ++. +.+++++++.
T Consensus 342 ~~ll~~~~~~~~~m~~~~~~~ 362 (382)
T PLN02605 342 AEWFGDKSDELEAMSENALKL 362 (382)
T ss_pred HHHHcCCHHHHHHHHHHHHHh
Confidence 999987 533 5566665554
No 36
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.47 E-value=5.1e-12 Score=119.11 Aligned_cols=149 Identities=16% Similarity=0.214 Sum_probs=103.6
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCC--cEEEEEeCCccCCCCcchhcccCCCcEEEeccCh-HHhhcccCcCc
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDK--YFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQ-LGVLAHEATGC 275 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~iL~~~~~~~ 275 (369)
+..+|++..|+..... ....+.+++..... .++|.+|......+.... + ..-++.+.+|+.+ .++++.+|+
T Consensus 182 ~~~~i~~~gg~~~~~~--~~~~l~~a~~~~~~~~~~~~~~G~g~~~~~~~~~-~-~~~~v~~~g~~~~~~~~~~~~d~-- 255 (357)
T PRK00726 182 GKPTLLVVGGSQGARV--LNEAVPEALALLPEALQVIHQTGKGDLEEVRAAY-A-AGINAEVVPFIDDMAAAYAAADL-- 255 (357)
T ss_pred CCeEEEEECCcHhHHH--HHHHHHHHHHHhhhCcEEEEEcCCCcHHHHHHHh-h-cCCcEEEeehHhhHHHHHHhCCE--
Confidence 4457777666653221 11222244433322 456666765322221111 1 2223677888854 489999999
Q ss_pred eeecCChhhHHHHHhhCCceeecCC----CCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-HHH
Q 048393 276 FLTHCGWNSTMEALGLGVPMLAMPQ----WSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-KEI 350 (369)
Q Consensus 276 ~I~hgG~~s~~eal~~GvP~i~~P~----~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~ 350 (369)
+|+|+|.++++||+++|+|+|++|. .++|..|+..+.+. |.|..+..+ +++++.|.++|.++++|++. +++
T Consensus 256 ~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~~~~---~~~~~~l~~~i~~ll~~~~~~~~~ 331 (357)
T PRK00726 256 VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLIPQS---DLTPEKLAEKLLELLSDPERLEAM 331 (357)
T ss_pred EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEEEcc---cCCHHHHHHHHHHHHcCHHHHHHH
Confidence 9999999999999999999999996 46899999999999 999999876 67899999999999999843 445
Q ss_pred HHHHHHH
Q 048393 351 KQNADKW 357 (369)
Q Consensus 351 ~~~a~~l 357 (369)
+++++++
T Consensus 332 ~~~~~~~ 338 (357)
T PRK00726 332 AEAARAL 338 (357)
T ss_pred HHHHHhc
Confidence 5555443
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.47 E-value=1.1e-11 Score=117.88 Aligned_cols=147 Identities=18% Similarity=0.274 Sum_probs=104.9
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHhC-CCcEEEEEeCCc--cCCCCcchhcccCCCcEEEeccChH-HhhcccCc
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKAS-DKYFLWVVRESE--QSKLPENFSDETSQKGLVVNWCPQL-GVLAHEAT 273 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~-~iL~~~~~ 273 (369)
++++++++..|+.+.. ..+..+++++.+. +.++++..+.+. ...+.. .....++++.+.+|+++. ++++.+|+
T Consensus 200 ~~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~~~~~l~~-~~~~~~~~v~~~g~~~~~~~l~~~aD~ 276 (380)
T PRK13609 200 PNKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEALKQSLED-LQETNPDALKVFGYVENIDELFRVTSC 276 (380)
T ss_pred CCCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHHHHHHHHH-HHhcCCCcEEEEechhhHHHHHHhccE
Confidence 4456788888887642 2345566666543 567776666431 111111 111223578889999876 89999998
Q ss_pred CceeecCChhhHHHHHhhCCceeec-CCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-HHHH
Q 048393 274 GCFLTHCGWNSTMEALGLGVPMLAM-PQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-KEIK 351 (369)
Q Consensus 274 ~~~I~hgG~~s~~eal~~GvP~i~~-P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~~ 351 (369)
+|+++|..|+.||+++|+|+|+. |..+.|..|+..+++. |+|+... +.+++.++|.++++|++. +.++
T Consensus 277 --~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~~-------~~~~l~~~i~~ll~~~~~~~~m~ 346 (380)
T PRK13609 277 --MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVIR-------DDEEVFAKTEALLQDDMKLLQMK 346 (380)
T ss_pred --EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEEC-------CHHHHHHHHHHHHCCHHHHHHHH
Confidence 99999999999999999999984 7777888999999988 8887642 678999999999998743 5566
Q ss_pred HHHHHH
Q 048393 352 QNADKW 357 (369)
Q Consensus 352 ~~a~~l 357 (369)
++++++
T Consensus 347 ~~~~~~ 352 (380)
T PRK13609 347 EAMKSL 352 (380)
T ss_pred HHHHHh
Confidence 665554
No 38
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.30 E-value=1.7e-10 Score=108.20 Aligned_cols=89 Identities=21% Similarity=0.305 Sum_probs=74.1
Q ss_pred ChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCC---CChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHH
Q 048393 263 PQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQW---SDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCIN 339 (369)
Q Consensus 263 p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~---~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~ 339 (369)
+-.++|+.+|+ +|+++|.+++.||+++|+|+|+.|.. .+|..|+..+.+. +.|..++.. +.+.+.|.+++.
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~~---~~~~~~l~~~i~ 316 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQK---ELLPEKLLEALL 316 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEecc---cCCHHHHHHHHH
Confidence 34589999999 99999989999999999999998863 4788899999998 999988765 568999999999
Q ss_pred HHhcCCcH-HHHHHHHHHH
Q 048393 340 EILEGERG-KEIKQNADKW 357 (369)
Q Consensus 340 ~~l~~~~~-~~~~~~a~~l 357 (369)
++++|++. ..+.++++++
T Consensus 317 ~ll~~~~~~~~~~~~~~~~ 335 (348)
T TIGR01133 317 KLLLDPANLEAMAEAARKL 335 (348)
T ss_pred HHHcCHHHHHHHHHHHHhc
Confidence 99998743 4455555543
No 39
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.27 E-value=1e-10 Score=111.20 Aligned_cols=159 Identities=14% Similarity=0.070 Sum_probs=102.6
Q ss_pred hccCCCCceEEEEeCccccCCHHHHHHHHHHHH---h--CCCcEEEEEeCCc-cCCCCcchhccc--CCCcEEEeccChH
Q 048393 194 LNDRANGSVVYVSFGSMATLKMEQMEELAWGLK---A--SDKYFLWVVRESE-QSKLPENFSDET--SQKGLVVNWCPQL 265 (369)
Q Consensus 194 l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~---~--~~~~~i~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~p~~ 265 (369)
+...+++++|.+-.||....-......+++++. + .+.++++...... ...+ +.+.+.. ...+.+..+ ...
T Consensus 185 lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~-~~~ 262 (385)
T TIGR00215 185 LGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQF-EQIKAEYGPDLQLHLIDG-DAR 262 (385)
T ss_pred cCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHHH-HHHHHHhCCCCcEEEECc-hHH
Confidence 333345678888888886532222344443333 2 2344554433221 1111 1111111 112222222 234
Q ss_pred HhhcccCcCceeecCChhhHHHHHhhCCceeec----CCCC---------ChhHHHHHHHhhcCceEEecCCCCCCcCHH
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALGLGVPMLAM----PQWS---------DQSTNAKYIMDVGKMGLKVPADEKGIVRRE 332 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~----P~~~---------dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 332 (369)
++|+.+|+ +|+.+|..|+ |++++|+|+|++ |+.. .|..|+..+... ++...+..+ ++|++
T Consensus 263 ~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~q~---~~~~~ 335 (385)
T TIGR00215 263 KAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELLQE---ECTPH 335 (385)
T ss_pred HHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhcCC---CCCHH
Confidence 79999999 9999999988 999999999999 7642 378899999998 888777666 79999
Q ss_pred HHHHHHHHHhcCC----cH-HHHHHHHHHHHHHH
Q 048393 333 AIAHCINEILEGE----RG-KEIKQNADKWRNFA 361 (369)
Q Consensus 333 ~l~~~i~~~l~~~----~~-~~~~~~a~~l~~~~ 361 (369)
.|.+++.++++|+ +. ..+++..+++.+.+
T Consensus 336 ~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l 369 (385)
T TIGR00215 336 PLAIALLLLLENGLKAYKEMHRERQFFEELRQRI 369 (385)
T ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHh
Confidence 9999999999987 54 66777776666655
No 40
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.20 E-value=2.2e-09 Score=102.26 Aligned_cols=139 Identities=17% Similarity=0.122 Sum_probs=92.2
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHh----CCCcEEEEEeC-CccCCCCcchhc-cc--------------CCCcEE
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKA----SDKYFLWVVRE-SEQSKLPENFSD-ET--------------SQKGLV 258 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~----~~~~~i~~~~~-~~~~~~~~~~~~-~~--------------~~~~~~ 258 (369)
++++|.+-.||......+.+..+++++.. .+..|++.+.. .....+.....+ .. .+++.+
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v 283 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEV 283 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEE
Confidence 45689999999865333334444544443 36788888743 211111110000 00 112445
Q ss_pred EeccChH-HhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhh---cCceEEecCCCCCCcCHHHH
Q 048393 259 VNWCPQL-GVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDV---GKMGLKVPADEKGIVRREAI 334 (369)
Q Consensus 259 ~~~~p~~-~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~---~g~g~~~~~~~~~~~~~~~l 334 (369)
..+..+. ++++.+++ +|+.+|..| .|+...|+|+|++|....|. ||...++. .|.++.+.. .+.+.|
T Consensus 284 ~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~-----~~~~~l 354 (396)
T TIGR03492 284 LLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLAS-----KNPEQA 354 (396)
T ss_pred EechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCC-----CCHHHH
Confidence 5555444 89999999 999999877 99999999999999888886 98776652 266666653 356999
Q ss_pred HHHHHHHhcCCc
Q 048393 335 AHCINEILEGER 346 (369)
Q Consensus 335 ~~~i~~~l~~~~ 346 (369)
.+++.++++|++
T Consensus 355 ~~~l~~ll~d~~ 366 (396)
T TIGR03492 355 AQVVRQLLADPE 366 (396)
T ss_pred HHHHHHHHcCHH
Confidence 999999999873
No 41
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.15 E-value=9.2e-10 Score=99.90 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=76.5
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHh--CCCcEEEEEeCCccCCCCcchhc--ccCCCcEEEeccChH-HhhcccCcCc
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKA--SDKYFLWVVRESEQSKLPENFSD--ETSQKGLVVNWCPQL-GVLAHEATGC 275 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~-~iL~~~~~~~ 275 (369)
+.|+|++|...... ....+++++.. .+.++.+++|..... .+.+.+ +...|+.+..++++. ++|+.+|+
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~~--~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl-- 244 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNPN--LDELKKFAKEYPNIILFIDVENMAELMNEADL-- 244 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCcC--HHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCE--
Confidence 57899998775433 34455556554 345777777765221 112211 123578888999987 89999999
Q ss_pred eeecCChhhHHHHHhhCCceeecCCCCChhHHHHH
Q 048393 276 FLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKY 310 (369)
Q Consensus 276 ~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~ 310 (369)
+||+|| +|++|++++|+|+|++|...+|..||+.
T Consensus 245 ~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 245 AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 999999 9999999999999999999999999975
No 42
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.03 E-value=6.8e-09 Score=98.66 Aligned_cols=156 Identities=13% Similarity=0.093 Sum_probs=85.7
Q ss_pred hccCCCCceEEEEeCccccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCc-cCCCCcchhccc-CCCcEEEeccCh-H
Q 048393 194 LNDRANGSVVYVSFGSMATLKMEQMEELAWGLKA-----SDKYFLWVVRESE-QSKLPENFSDET-SQKGLVVNWCPQ-L 265 (369)
Q Consensus 194 l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~-----~~~~~i~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~p~-~ 265 (369)
+...+++++|++..||...........+++++.. .+..++|..+... ...+.+. ..+. .-++.+. -++ .
T Consensus 180 l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~~v~~~--~~~~~ 256 (380)
T PRK00025 180 LGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKRREQIEEA-LAEYAGLEVTLL--DGQKR 256 (380)
T ss_pred cCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChhhHHHHHHH-HhhcCCCCeEEE--cccHH
Confidence 3333345567777777653211223344444322 2456777654221 1111110 1111 1123332 233 3
Q ss_pred HhhcccCcCceeecCChhhHHHHHhhCCceeecCCCC--------ChhHH-----HHHHHhhcCceEEecCCCCCCcCHH
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWS--------DQSTN-----AKYIMDVGKMGLKVPADEKGIVRRE 332 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~--------dQ~~n-----a~~~~~~~g~g~~~~~~~~~~~~~~ 332 (369)
.+++.+|+ +|+.+|.+++ |++++|+|+|+.|-.. +|..| +..+.+. +++..+... ..+++
T Consensus 257 ~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~---~~~~~ 329 (380)
T PRK00025 257 EAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-ELVPELLQE---EATPE 329 (380)
T ss_pred HHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-CcchhhcCC---CCCHH
Confidence 78999999 9999998887 9999999999985432 22222 2233333 333333333 57899
Q ss_pred HHHHHHHHHhcCCcH-HHHHHHHHHHHH
Q 048393 333 AIAHCINEILEGERG-KEIKQNADKWRN 359 (369)
Q Consensus 333 ~l~~~i~~~l~~~~~-~~~~~~a~~l~~ 359 (369)
.|.+++.++++|++. ++++++++++.+
T Consensus 330 ~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 357 (380)
T PRK00025 330 KLARALLPLLADGARRQALLEGFTELHQ 357 (380)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 999999999999853 455555543333
No 43
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.84 E-value=1.1e-06 Score=81.99 Aligned_cols=141 Identities=16% Similarity=0.177 Sum_probs=91.6
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHHh-CCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH---HhhcccCcC
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLKA-SDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL---GVLAHEATG 274 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~~~ 274 (369)
++.+++..|+... .....+.+++..+.. .+..+++. |..... ..+. ...+++.+.+|+++. ++++.+++
T Consensus 196 ~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~-G~~~~~---~~~~-~~~~~v~~~g~~~~~~~~~~~~~~d~- 269 (364)
T cd03814 196 DRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIV-GDGPAR---ARLE-ARYPNVHFLGFLDGEELAAAYASADV- 269 (364)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEE-eCCchH---HHHh-ccCCcEEEEeccCHHHHHHHHHhCCE-
Confidence 3466777787653 233444444444433 23454444 432111 1111 234678889998866 58999998
Q ss_pred ceeecCC----hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-HH
Q 048393 275 CFLTHCG----WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-KE 349 (369)
Q Consensus 275 ~~I~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~ 349 (369)
+|..+. .+++.||+++|+|+|+.+..+ +...+++. +.|..+.. -+.+++.++|.+++.|++. +.
T Consensus 270 -~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~-~~g~~~~~-----~~~~~l~~~i~~l~~~~~~~~~ 338 (364)
T cd03814 270 -FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDG-ENGLLVEP-----GDAEAFAAALAALLADPELRRR 338 (364)
T ss_pred -EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCC-cceEEcCC-----CCHHHHHHHHHHHHcCHHHHHH
Confidence 886654 478999999999999987554 55566767 88988874 3788899999999998743 44
Q ss_pred HHHHHHHH
Q 048393 350 IKQNADKW 357 (369)
Q Consensus 350 ~~~~a~~l 357 (369)
+.+++++.
T Consensus 339 ~~~~~~~~ 346 (364)
T cd03814 339 MAARARAE 346 (364)
T ss_pred HHHHHHHH
Confidence 55555443
No 44
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.71 E-value=1.2e-07 Score=85.26 Aligned_cols=135 Identities=19% Similarity=0.251 Sum_probs=100.5
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHh-CCCc--EEEEEeCCccCCCCcchh----cc--cCCCcEEEeccChH-Hh
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKA-SDKY--FLWVVRESEQSKLPENFS----DE--TSQKGLVVNWCPQL-GV 267 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~-~~~~--~i~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~p~~-~i 267 (369)
+++.-|+||-|.-.. ..+.+.+.+.+..- .+.+ .+..+|.. .|.... .. ..+++.+..|..+. .+
T Consensus 217 pE~~~Ilvs~GGG~d-G~eLi~~~l~A~~~l~~l~~~~~ivtGP~----MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~l 291 (400)
T COG4671 217 PEGFDILVSVGGGAD-GAELIETALAAAQLLAGLNHKWLIVTGPF----MPEAQRQKLLASAPKRPHISIFEFRNDFESL 291 (400)
T ss_pred CccceEEEecCCChh-hHHHHHHHHHHhhhCCCCCcceEEEeCCC----CCHHHHHHHHHhcccCCCeEEEEhhhhHHHH
Confidence 344478888777642 33455565555443 3433 44444432 332221 11 23678899988766 89
Q ss_pred hcccCcCceeecCChhhHHHHHhhCCceeecCCC---CChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhc
Q 048393 268 LAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQW---SDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 268 L~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~---~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
++.++. +|+-||+||++|-+.+|+|.+++|.. -||..-|.|++++ |+.-++..+ ++++..+.++|...++
T Consensus 292 l~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~L-GL~dvL~pe---~lt~~~La~al~~~l~ 364 (400)
T COG4671 292 LAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEEL-GLVDVLLPE---NLTPQNLADALKAALA 364 (400)
T ss_pred HHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhc-CcceeeCcc---cCChHHHHHHHHhccc
Confidence 999999 99999999999999999999999974 3899999999999 998888777 7999999999998887
No 45
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.70 E-value=1.4e-06 Score=82.11 Aligned_cols=93 Identities=18% Similarity=0.198 Sum_probs=69.5
Q ss_pred CCCcEEEeccChH---HhhcccCcCceeec----------CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceE
Q 048393 253 SQKGLVVNWCPQL---GVLAHEATGCFLTH----------CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGL 319 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~~~~~~I~h----------gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~ 319 (369)
.+++.+.+++|+. .+++.+++ +|.- |-.+++.||+++|+|+|+-+..+ ++..+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecC-CeeE
Confidence 4678888998865 56899998 6532 23579999999999999876543 56666677 7898
Q ss_pred EecCCCCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHH
Q 048393 320 KVPADEKGIVRREAIAHCINEILEGERG-KEIKQNADKW 357 (369)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l 357 (369)
.++.. +.+++.++|.++++|++. ..+.+++++.
T Consensus 317 ~~~~~-----d~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 350 (367)
T cd05844 317 LVPEG-----DVAALAAALGRLLADPDLRARMGAAGRRR 350 (367)
T ss_pred EECCC-----CHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 88743 789999999999998742 4555555543
No 46
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.61 E-value=1.4e-05 Score=77.20 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=69.9
Q ss_pred cEEEeccChH-HhhcccCcCceeec-----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCc
Q 048393 256 GLVVNWCPQL-GVLAHEATGCFLTH-----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIV 329 (369)
Q Consensus 256 ~~~~~~~p~~-~iL~~~~~~~~I~h-----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~ 329 (369)
+.+.+...+. .+++.+|+ ++.. +|..++.||+++|+|+|+-|..+++......+.+. |+++...
T Consensus 304 v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~~------- 373 (425)
T PRK05749 304 VLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQVE------- 373 (425)
T ss_pred EEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEEC-------
Confidence 4444444344 78899987 5432 34456999999999999999888888888877777 7665532
Q ss_pred CHHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHH
Q 048393 330 RREAIAHCINEILEGERG-KEIKQNADKWRNFA 361 (369)
Q Consensus 330 ~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~~~ 361 (369)
+.++|.++|.++++|++. ..+.+++++..+.-
T Consensus 374 d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 374 DAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC
Confidence 689999999999998754 66777776665443
No 47
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.60 E-value=1.6e-05 Score=77.83 Aligned_cols=139 Identities=13% Similarity=0.119 Sum_probs=89.0
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhC-CCcEEEEEeCCccCCCCcchhcc-cCCCcEEEeccChH---HhhcccCcCce
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKAS-DKYFLWVVRESEQSKLPENFSDE-TSQKGLVVNWCPQL---GVLAHEATGCF 276 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~---~iL~~~~~~~~ 276 (369)
.+++..|+... ...+..++++++.. +..+++ +|.+.. .+.+.+. ...++.+.+++++. .+++.+|+ |
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~i-vG~G~~---~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv--~ 335 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAF-VGDGPY---REELEKMFAGTPTVFTGMLQGDELSQAYASGDV--F 335 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEE-EeCChH---HHHHHHHhccCCeEEeccCCHHHHHHHHHHCCE--E
Confidence 55666788753 22355667777654 455554 443311 1111111 12467888999754 58899999 7
Q ss_pred eecCC----hhhHHHHHhhCCceeecCCCCChhHHHHHHHh---hcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-H
Q 048393 277 LTHCG----WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMD---VGKMGLKVPADEKGIVRREAIAHCINEILEGERG-K 348 (369)
Q Consensus 277 I~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~---~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~ 348 (369)
|.-.. ..++.||+++|+|+|+....+ ..+.+++ - +.|..++.+ +.+++.++|.++++|++. .
T Consensus 336 V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~-~~G~lv~~~-----d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 336 VMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEG-KTGFLYTPG-----DVDDCVEKLETLLADPELRE 405 (465)
T ss_pred EECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCC-CceEEeCCC-----CHHHHHHHHHHHHhCHHHHH
Confidence 75432 357999999999999876432 3344554 5 778888754 789999999999988743 5
Q ss_pred HHHHHHHHHH
Q 048393 349 EIKQNADKWR 358 (369)
Q Consensus 349 ~~~~~a~~l~ 358 (369)
.+.+++++..
T Consensus 406 ~~~~~a~~~~ 415 (465)
T PLN02871 406 RMGAAAREEV 415 (465)
T ss_pred HHHHHHHHHH
Confidence 5666665543
No 48
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.58 E-value=8.6e-05 Score=70.59 Aligned_cols=94 Identities=15% Similarity=0.163 Sum_probs=70.2
Q ss_pred CCCcEEEeccChH---HhhcccCcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCC
Q 048393 253 SQKGLVVNWCPQL---GVLAHEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADE 325 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 325 (369)
.+++.+.+|+|+. .+++.+++ ++.. |-..++.||+++|+|+|+-+..+ ..+.+++. +.|..++..
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~-~~g~~~~~~- 353 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDG-VTGLLVDPR- 353 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCC-CCeEEeCCC-
Confidence 3578888999976 46889988 7743 33468999999999999876443 55667777 789888743
Q ss_pred CCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Q 048393 326 KGIVRREAIAHCINEILEGERG-KEIKQNADKWR 358 (369)
Q Consensus 326 ~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~ 358 (369)
+.+++.++|.+++++++. ..+.+++++..
T Consensus 354 ----~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~ 383 (398)
T cd03800 354 ----DPEALAAALRRLLTDPALRRRLSRAGLRRA 383 (398)
T ss_pred ----CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 799999999999988743 45666665543
No 49
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.58 E-value=2.4e-05 Score=72.71 Aligned_cols=144 Identities=17% Similarity=0.181 Sum_probs=89.0
Q ss_pred CCceEEEEeCcccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH---HhhcccCcC
Q 048393 199 NGSVVYVSFGSMAT-LKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL---GVLAHEATG 274 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~~~ 274 (369)
+++.+++..|+... .....+-+.+..+...+..+++. |....... .........++.+.+++++. ++++.+++
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~- 265 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGLELEE-ESYELEGDPRVEFLGAYPQEEIDDFYAEIDV- 265 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCchhhhH-HHHhhcCCCeEEEeCCCCHHHHHHHHHhCCE-
Confidence 34467777888753 22333333333333335555544 43321110 00000223678888999755 57899998
Q ss_pred ceee-----cCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-H
Q 048393 275 CFLT-----HCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-K 348 (369)
Q Consensus 275 ~~I~-----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~ 348 (369)
+|. -|...++.||+++|+|+|+.+.. ...+.+.+. +.|..++.. +.+++.+++.++++|++. +
T Consensus 266 -~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~~-----d~~~l~~~i~~l~~~~~~~~ 334 (359)
T cd03823 266 -LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDG-VNGLLFPPG-----DAEDLAAALERLIDDPDLLE 334 (359)
T ss_pred -EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCC-CcEEEECCC-----CHHHHHHHHHHHHhChHHHH
Confidence 663 23345899999999999986643 455666666 678888754 689999999999998743 4
Q ss_pred HHHHHHHH
Q 048393 349 EIKQNADK 356 (369)
Q Consensus 349 ~~~~~a~~ 356 (369)
.+.+++++
T Consensus 335 ~~~~~~~~ 342 (359)
T cd03823 335 RLRAGIEP 342 (359)
T ss_pred HHHHhHHH
Confidence 55555544
No 50
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.53 E-value=3.3e-05 Score=72.36 Aligned_cols=148 Identities=22% Similarity=0.256 Sum_probs=89.3
Q ss_pred CCceEEEEeCcccc-CCHHHHHHHHHHHHhC-CCcEEEEEeCCcc-CCCCcchhcccCCCcEEEeccChH---HhhcccC
Q 048393 199 NGSVVYVSFGSMAT-LKMEQMEELAWGLKAS-DKYFLWVVRESEQ-SKLPENFSDETSQKGLVVNWCPQL---GVLAHEA 272 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~ 272 (369)
+++.+++..|+... .....+.+.+..+.+. +..+++ +|.... ..+.+.......+++.+.+++++. +++..++
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d 296 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAAD 296 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhC
Confidence 34577777888763 2333444444444333 455443 343311 111110111223678888998865 5788999
Q ss_pred cCceeecCC---------hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhc
Q 048393 273 TGCFLTHCG---------WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 273 ~~~~I~hgG---------~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
+ +|.... .+++.||+++|+|+|+.+..+.+.. +.+. +.|..+... +.+++.++|.++++
T Consensus 297 i--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~~-~~g~~~~~~-----~~~~l~~~i~~~~~ 364 (394)
T cd03794 297 V--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEEA-GAGLVVPPG-----DPEALAAAILELLD 364 (394)
T ss_pred e--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hccC-CcceEeCCC-----CHHHHHHHHHHHHh
Confidence 8 664322 3457999999999999887655443 3333 567777643 78999999999998
Q ss_pred CCcH-HHHHHHHHHHHH
Q 048393 344 GERG-KEIKQNADKWRN 359 (369)
Q Consensus 344 ~~~~-~~~~~~a~~l~~ 359 (369)
|++- ..+++++++...
T Consensus 365 ~~~~~~~~~~~~~~~~~ 381 (394)
T cd03794 365 DPEERAEMGENGRRYVE 381 (394)
T ss_pred ChHHHHHHHHHHHHHHH
Confidence 8743 455555555443
No 51
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.53 E-value=5.5e-06 Score=77.08 Aligned_cols=88 Identities=14% Similarity=0.155 Sum_probs=64.2
Q ss_pred HHhhcccCcCceeecCChhhHHHHHhhCCceeecCC--CCChhHHHHHHH---hhcCceEEecC----C------CCCCc
Q 048393 265 LGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQ--WSDQSTNAKYIM---DVGKMGLKVPA----D------EKGIV 329 (369)
Q Consensus 265 ~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~--~~dQ~~na~~~~---~~~g~g~~~~~----~------~~~~~ 329 (369)
.++++.+|+ +|+..|..|+ |+..+|+|||+ ++ ..-|+.||+++. .. |+.-.+-. . ...++
T Consensus 230 ~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~i-gL~Nii~~~~~~~~vvPEllQ~~~ 304 (347)
T PRK14089 230 HKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHI-GLANIFFDFLGKEPLHPELLQEFV 304 (347)
T ss_pred HHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCee-ehHHHhcCCCcccccCchhhcccC
Confidence 479999999 9999999999 99999999998 54 457999999999 55 66554421 0 01268
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 048393 330 RREAIAHCINEILEGERGKEIKQNADKWRNFA 361 (369)
Q Consensus 330 ~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~ 361 (369)
|++.|.+++.+. .. +.+++...++.+.+
T Consensus 305 t~~~la~~i~~~-~~---~~~~~~~~~l~~~l 332 (347)
T PRK14089 305 TVENLLKAYKEM-DR---EKFFKKSKELREYL 332 (347)
T ss_pred CHHHHHHHHHHH-HH---HHHHHHHHHHHHHh
Confidence 999999999772 11 24555555555544
No 52
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.52 E-value=7.9e-06 Score=77.04 Aligned_cols=133 Identities=21% Similarity=0.212 Sum_probs=82.3
Q ss_pred CCceEEEEeCccccC-CHHHHHHHHHHHHhCCC-cEEEEEeCCc--cCCCCcchhcc-c-CCCcEEEeccChH---Hhhc
Q 048393 199 NGSVVYVSFGSMATL-KMEQMEELAWGLKASDK-YFLWVVRESE--QSKLPENFSDE-T-SQKGLVVNWCPQL---GVLA 269 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~-~~~~~~~~~~~l~~~~~-~~i~~~~~~~--~~~~~~~~~~~-~-~~~~~~~~~~p~~---~iL~ 269 (369)
+++.+++.+|+.... ....+..+++++..... .+.+.+.... ...+.+...+. . .+++.+.+..+.. .++.
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 276 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLK 276 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHH
Confidence 455788888876543 34456777777765432 2333332221 11121111111 1 3567776655433 5678
Q ss_pred ccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 270 HEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
.+++ ||+..| +.+.||+++|+|+|+++...+ +..+.+. |+++.+. . +.++|.++|.++++++
T Consensus 277 ~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~~~----~~~~~~~-g~~~~~~-----~-~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 277 NADL--VLTDSG-GIQEEASFLGVPVLNLRDRTE----RPETVES-GTNVLVG-----T-DPEAILAAIEKLLSDE 338 (363)
T ss_pred cCcE--EEEcCc-cHHhhhhhcCCCEEeeCCCCc----cchhhhe-eeEEecC-----C-CHHHHHHHHHHHhcCc
Confidence 8998 999999 778899999999999874322 3344455 6665543 2 5889999999999887
No 53
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.50 E-value=5.8e-05 Score=69.81 Aligned_cols=146 Identities=19% Similarity=0.237 Sum_probs=89.4
Q ss_pred CCceEEEEeCcccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCccCCCCcc--hh-cccCCCcEEEeccChH-Hhhccc
Q 048393 199 NGSVVYVSFGSMAT-LKMEQMEELAWGLKA--SDKYFLWVVRESEQSKLPEN--FS-DETSQKGLVVNWCPQL-GVLAHE 271 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~p~~-~iL~~~ 271 (369)
+++.+++..|+... .....+-+.+..+.. .+..+++. |.......... .. .....++.+.++..+. .+++.+
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~a 264 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV-GDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAA 264 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEE-cCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhc
Confidence 34578888888753 233344444444443 33454444 43321111110 11 1123567777775544 789999
Q ss_pred CcCceeecCC----hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH
Q 048393 272 ATGCFLTHCG----WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG 347 (369)
Q Consensus 272 ~~~~~I~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~ 347 (369)
++ +|.-.. .+++.||+++|+|+|+-+..+ ....+++. +.|..++.. +.+++.++|.+++.|++.
T Consensus 265 di--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~-~~g~~~~~~-----~~~~~~~~i~~l~~~~~~ 332 (359)
T cd03808 265 DV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDG-VNGFLVPPG-----DAEALADAIERLIEDPEL 332 (359)
T ss_pred cE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcC-cceEEECCC-----CHHHHHHHHHHHHhCHHH
Confidence 98 775432 579999999999999865443 34555556 778888743 789999999999988743
Q ss_pred -HHHHHHHHHH
Q 048393 348 -KEIKQNADKW 357 (369)
Q Consensus 348 -~~~~~~a~~l 357 (369)
..+.+++++.
T Consensus 333 ~~~~~~~~~~~ 343 (359)
T cd03808 333 RARMGQAARKR 343 (359)
T ss_pred HHHHHHHHHHH
Confidence 4555555554
No 54
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.48 E-value=8.8e-07 Score=69.83 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=77.1
Q ss_pred eEEEEeCccccCCH-H--HHHHHHHHHHhCCC-cEEEEEeCCccCCCCcchhc-ccCCCcEE--EeccCh-HHhhcccCc
Q 048393 202 VVYVSFGSMATLKM-E--QMEELAWGLKASDK-YFLWVVRESEQSKLPENFSD-ETSQKGLV--VNWCPQ-LGVLAHEAT 273 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~-~--~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~p~-~~iL~~~~~ 273 (369)
.+||+-||..-... . .-++..+.|.+.|+ +.+.+.|.+.. ..++.... +..+.+.+ .+|-|. .+..+.+++
T Consensus 5 ~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~-~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Adl 83 (170)
T KOG3349|consen 5 TVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP-FFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSADL 83 (170)
T ss_pred EEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc-CCCCHHHhhcccCCeEEEEEecCccHHHHHhhccE
Confidence 79999999862110 0 12334556666774 67777876631 11111110 11122222 467786 477788888
Q ss_pred CceeecCChhhHHHHHhhCCceeecCC----CCChhHHHHHHHhhcCceEEe
Q 048393 274 GCFLTHCGWNSTMEALGLGVPMLAMPQ----WSDQSTNAKYIMDVGKMGLKV 321 (369)
Q Consensus 274 ~~~I~hgG~~s~~eal~~GvP~i~~P~----~~dQ~~na~~~~~~~g~g~~~ 321 (369)
+|+|+|+||++|.+..|+|.|+++- -.+|-.-|..+++. |-=...
T Consensus 84 --VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL~~C 132 (170)
T KOG3349|consen 84 --VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYLYYC 132 (170)
T ss_pred --EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcEEEe
Confidence 9999999999999999999999994 46899999999988 544333
No 55
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.47 E-value=6.7e-05 Score=70.02 Aligned_cols=149 Identities=16% Similarity=0.201 Sum_probs=92.1
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCccCCCCcchh-cccCCCcEEEeccChH---HhhcccC
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLKA--SDKYFLWVVRESEQSKLPENFS-DETSQKGLVVNWCPQL---GVLAHEA 272 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~---~iL~~~~ 272 (369)
++.+++..|+... .....+-+++..+.. .+..+++.-+......+..... ....+++.+.+++|+. .++++++
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 280 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAAD 280 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcC
Confidence 4466777787753 233444444444443 3455554432221111111000 1224678888999876 5788999
Q ss_pred cCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-
Q 048393 273 TGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG- 347 (369)
Q Consensus 273 ~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~- 347 (369)
+ +|.- +...++.||+++|+|+|+... ...+..+++. +.|..++.. +. ++.+++.+++++++.
T Consensus 281 ~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~~-~~g~~~~~~-----~~-~~~~~i~~l~~~~~~~ 347 (374)
T cd03817 281 L--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVADG-ENGFLFPPG-----DE-ALAEALLRLLQDPELR 347 (374)
T ss_pred E--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheecC-ceeEEeCCC-----CH-HHHHHHHHHHhChHHH
Confidence 8 6633 334789999999999998654 3355666666 778888744 23 899999999998753
Q ss_pred HHHHHHHHHHHHHH
Q 048393 348 KEIKQNADKWRNFA 361 (369)
Q Consensus 348 ~~~~~~a~~l~~~~ 361 (369)
+.+.+++++..+..
T Consensus 348 ~~~~~~~~~~~~~~ 361 (374)
T cd03817 348 RRLSKNAEESAEKF 361 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 55677766665553
No 56
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.40 E-value=3.8e-05 Score=71.77 Aligned_cols=147 Identities=17% Similarity=0.139 Sum_probs=90.7
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCC-CcEEEEEeCCc-cCCCCcch-hcccCCCcEEEeccChH---HhhcccCc
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASD-KYFLWVVRESE-QSKLPENF-SDETSQKGLVVNWCPQL---GVLAHEAT 273 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~-~~~i~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~p~~---~iL~~~~~ 273 (369)
+..+++..|+.... ..+..+++++.... ..+++. |... ...+..-. ......|+.+.+|+|+. .+++.+++
T Consensus 190 ~~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~l~i~-G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~ 266 (357)
T cd03795 190 GRPFFLFVGRLVYY--KGLDVLLEAAAALPDAPLVIV-GEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDV 266 (357)
T ss_pred CCcEEEEecccccc--cCHHHHHHHHHhccCcEEEEE-eCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCE
Confidence 34677778887532 23555666666555 454443 3321 11111111 01234678899999975 58888988
Q ss_pred Cceeec---CC-hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-H
Q 048393 274 GCFLTH---CG-WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-K 348 (369)
Q Consensus 274 ~~~I~h---gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~ 348 (369)
.++.++ -| ..++.||+++|+|+|+....+....... +. +.|..+.. -+.+++.++|.++++|++. .
T Consensus 267 ~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~~-----~d~~~~~~~i~~l~~~~~~~~ 337 (357)
T cd03795 267 FVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVPP-----GDPAALAEAIRRLLEDPELRE 337 (357)
T ss_pred EEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeCC-----CCHHHHHHHHHHHHHCHHHHH
Confidence 333332 23 3579999999999999765554433222 24 67888764 3899999999999998743 5
Q ss_pred HHHHHHHHHH
Q 048393 349 EIKQNADKWR 358 (369)
Q Consensus 349 ~~~~~a~~l~ 358 (369)
.+++++++..
T Consensus 338 ~~~~~~~~~~ 347 (357)
T cd03795 338 RLGEAARERA 347 (357)
T ss_pred HHHHHHHHHH
Confidence 5666665544
No 57
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.39 E-value=8e-05 Score=68.97 Aligned_cols=92 Identities=21% Similarity=0.277 Sum_probs=68.0
Q ss_pred cCCCcEEEeccChH---HhhcccCcCceee----cCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCC
Q 048393 252 TSQKGLVVNWCPQL---GVLAHEATGCFLT----HCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPAD 324 (369)
Q Consensus 252 ~~~~~~~~~~~p~~---~iL~~~~~~~~I~----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~ 324 (369)
..+++.+.+++++. +++..+++ +|. -|..+++.||+++|+|+|+.+. ......+++. +.|..++.
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~~- 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETGLLVPP- 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cceEEeCC-
Confidence 34678888999644 68899998 663 3556799999999999998765 3355566656 77888874
Q ss_pred CCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHH
Q 048393 325 EKGIVRREAIAHCINEILEGERG-KEIKQNAD 355 (369)
Q Consensus 325 ~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~ 355 (369)
.+.+++.++|.+++++++. +.+.++++
T Consensus 326 ----~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 326 ----GDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred ----CCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 3689999999999988742 34444444
No 58
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.38 E-value=9.3e-05 Score=68.13 Aligned_cols=147 Identities=18% Similarity=0.197 Sum_probs=85.5
Q ss_pred ceEEEEeCcccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCccC-CCCcchh-cccCCCcEEEeccChH-HhhcccCcC
Q 048393 201 SVVYVSFGSMAT-LKMEQMEELAWGLKA--SDKYFLWVVRESEQS-KLPENFS-DETSQKGLVVNWCPQL-GVLAHEATG 274 (369)
Q Consensus 201 ~~i~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~p~~-~iL~~~~~~ 274 (369)
..+++..|+... .....+...+..+.+ .+..+++. |..... .+..... .....++.+.++.... .++..+++
T Consensus 178 ~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~- 255 (348)
T cd03820 178 SKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIV-GDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASI- 255 (348)
T ss_pred CcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEE-eCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCE-
Confidence 356666677653 233344444444432 23444433 432111 1111000 0123456666664444 78999998
Q ss_pred ceeecC----ChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcC-ceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-H
Q 048393 275 CFLTHC----GWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGK-MGLKVPADEKGIVRREAIAHCINEILEGERG-K 348 (369)
Q Consensus 275 ~~I~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g-~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~ 348 (369)
+|.-. ..+++.||+++|+|+|+.+..+.+. .+.+. + .|..++. .+.+++.++|.++++|++. .
T Consensus 256 -~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~-~~~g~~~~~-----~~~~~~~~~i~~ll~~~~~~~ 324 (348)
T cd03820 256 -FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIED-GVNGLLVPN-----GDVEALAEALLRLMEDEELRK 324 (348)
T ss_pred -EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhcc-CcceEEeCC-----CCHHHHHHHHHHHHcCHHHHH
Confidence 66554 2579999999999999876544332 23333 4 7888874 3789999999999998843 4
Q ss_pred HHHHHHHHHHHH
Q 048393 349 EIKQNADKWRNF 360 (369)
Q Consensus 349 ~~~~~a~~l~~~ 360 (369)
.+.++++...+.
T Consensus 325 ~~~~~~~~~~~~ 336 (348)
T cd03820 325 RMGANARESAER 336 (348)
T ss_pred HHHHHHHHHHHH
Confidence 555555544443
No 59
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.37 E-value=5e-05 Score=71.83 Aligned_cols=129 Identities=16% Similarity=0.234 Sum_probs=78.8
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCccCCCCcchhc--ccCCCcEEEeccChH---Hhhc
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKAS-----DKYFLWVVRESEQSKLPENFSD--ETSQKGLVVNWCPQL---GVLA 269 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~-----~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~---~iL~ 269 (369)
+.+++++++-..... +.+..+++++... +..+++..+.+.. ....+.+ ...+++.+.+.++.. .+++
T Consensus 197 ~~~vl~~~hr~~~~~-k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 273 (365)
T TIGR00236 197 KRYILLTLHRRENVG-EPLENIFKAIREIVEEFEDVQIVYPVHLNPV--VREPLHKHLGDSKRVHLIEPLEYLDFLNLAA 273 (365)
T ss_pred CCEEEEecCchhhhh-hHHHHHHHHHHHHHHHCCCCEEEEECCCChH--HHHHHHHHhCCCCCEEEECCCChHHHHHHHH
Confidence 346666554332211 3355566665442 4566665443211 1111111 122567777765543 5778
Q ss_pred ccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 270 HEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
++++ +|+-.|. .+.||+++|+|+|..+..++++. +.+. |.++.+. -+.++|.+++.++++|+
T Consensus 274 ~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~------~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 274 NSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVG------TDKENITKAAKRLLTDP 335 (365)
T ss_pred hCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeC------CCHHHHHHHHHHHHhCh
Confidence 8888 9997764 47999999999999976665542 2335 7676553 27899999999999887
No 60
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.37 E-value=0.00023 Score=68.05 Aligned_cols=96 Identities=19% Similarity=0.176 Sum_probs=68.7
Q ss_pred CCcEEEeccChH---HhhcccCcCceeec-CC-hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCC
Q 048393 254 QKGLVVNWCPQL---GVLAHEATGCFLTH-CG-WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGI 328 (369)
Q Consensus 254 ~~~~~~~~~p~~---~iL~~~~~~~~I~h-gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 328 (369)
+++.+.+++|+. .+|+.+++-++.+. .| ..++.||+++|+|+|+... ......+.+- ..|+.++..
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~~-~~G~lv~~~---- 351 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITDG-ENGLLVDFF---- 351 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhcccC-CceEEcCCC----
Confidence 578888999876 47788988333333 22 2489999999999998643 3445556555 678887743
Q ss_pred cCHHHHHHHHHHHhcCCcH-HHHHHHHHHHHH
Q 048393 329 VRREAIAHCINEILEGERG-KEIKQNADKWRN 359 (369)
Q Consensus 329 ~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~ 359 (369)
+.+++.++|.++++|++. ..+.+++++..+
T Consensus 352 -d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~ 382 (396)
T cd03818 352 -DPDALAAAVIELLDDPARRARLRRAARRTAL 382 (396)
T ss_pred -CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 799999999999998743 566666665543
No 61
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.34 E-value=0.00024 Score=66.95 Aligned_cols=146 Identities=17% Similarity=0.187 Sum_probs=88.5
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHH-hCCCcEEEEEeCCccCCCCcchhc-ccCCCcEEEeccChH-HhhcccCcCc
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLK-ASDKYFLWVVRESEQSKLPENFSD-ETSQKGLVVNWCPQL-GVLAHEATGC 275 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~-~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~-~iL~~~~~~~ 275 (369)
+..+++..|.... .....+-+.+..+. +.+.++++.-.......+...... ...+++.+.++.++. ++++.+++
T Consensus 196 ~~~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~-- 273 (371)
T cd04962 196 GEKVLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELLSIADL-- 273 (371)
T ss_pred CCeEEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCE--
Confidence 3466777777753 22233222223232 235555544322211111111111 123567788887765 78999998
Q ss_pred eee----cCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-HHH
Q 048393 276 FLT----HCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-KEI 350 (369)
Q Consensus 276 ~I~----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~ 350 (369)
+|. -|...++.||+++|+|+|+.... ..+..+++- ..|..++.+ +.+++.+++.+++++++. .++
T Consensus 274 ~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~-~~G~~~~~~-----~~~~l~~~i~~l~~~~~~~~~~ 343 (371)
T cd04962 274 FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHG-ETGFLVDVG-----DVEAMAEYALSLLEDDELWQEF 343 (371)
T ss_pred EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCC-CceEEcCCC-----CHHHHHHHHHHHHhCHHHHHHH
Confidence 662 23456999999999999986443 456666665 678777643 789999999999988743 556
Q ss_pred HHHHHHH
Q 048393 351 KQNADKW 357 (369)
Q Consensus 351 ~~~a~~l 357 (369)
++++++.
T Consensus 344 ~~~~~~~ 350 (371)
T cd04962 344 SRAARNR 350 (371)
T ss_pred HHHHHHH
Confidence 6666665
No 62
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.32 E-value=0.0003 Score=65.70 Aligned_cols=94 Identities=19% Similarity=0.360 Sum_probs=67.2
Q ss_pred CCCcEEEe-ccChH---HhhcccCcCcee--ec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEec
Q 048393 253 SQKGLVVN-WCPQL---GVLAHEATGCFL--TH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVP 322 (369)
Q Consensus 253 ~~~~~~~~-~~p~~---~iL~~~~~~~~I--~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~ 322 (369)
.+++.+.+ |+|+. .+++.+++ +| ++ |-.+++.||+++|+|+|+.+..+ ...+... +.|..+.
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEc
Confidence 35677764 48754 68889988 65 22 33568999999999999977654 3344555 7788877
Q ss_pred CCCCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHHH
Q 048393 323 ADEKGIVRREAIAHCINEILEGERG-KEIKQNADKWRN 359 (369)
Q Consensus 323 ~~~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~ 359 (369)
.. +.+++.+++.+++++++. .++++++++..+
T Consensus 318 ~~-----d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 318 PG-----DPAALAEAIRRLLADPELAQALRARAREYAR 350 (366)
T ss_pred CC-----CHHHHHHHHHHHHcChHHHHHHHHHHHHHHh
Confidence 43 689999999999998643 556666665543
No 63
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.31 E-value=0.00052 Score=65.74 Aligned_cols=94 Identities=17% Similarity=0.110 Sum_probs=68.2
Q ss_pred CCCcEEEeccChH---HhhcccCcCceee---c-CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCC
Q 048393 253 SQKGLVVNWCPQL---GVLAHEATGCFLT---H-CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADE 325 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~~~~~~I~---h-gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 325 (369)
.+++.+.+++|.. ++|+.+++ +|. + |...++.||+++|+|+|+....+ ....+++. ..|..++..
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~-~~g~~~~~~- 353 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADG-ETGLLVDGH- 353 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccC-CceEECCCC-
Confidence 3578888998765 67999998 663 2 33468999999999999865432 34455555 678887743
Q ss_pred CCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Q 048393 326 KGIVRREAIAHCINEILEGERG-KEIKQNADKWR 358 (369)
Q Consensus 326 ~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~ 358 (369)
+.+++.++|.+++++++. +.+++++++..
T Consensus 354 ----d~~~la~~i~~~l~~~~~~~~~~~~~~~~~ 383 (405)
T TIGR03449 354 ----DPADWADALARLLDDPRTRIRMGAAAVEHA 383 (405)
T ss_pred ----CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 789999999999988643 55666665543
No 64
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.31 E-value=0.00017 Score=67.20 Aligned_cols=144 Identities=19% Similarity=0.206 Sum_probs=87.0
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCcc-CCCCcchhc--ccCCCcEEEeccChH---Hhhcc
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLKAS--DKYFLWVVRESEQ-SKLPENFSD--ETSQKGLVVNWCPQL---GVLAH 270 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~p~~---~iL~~ 270 (369)
+++.++..|+... .....+.+.+..+... +..+++. |.... ..+. .... ...+++.+.+++|+. .++++
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~-G~~~~~~~~~-~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ 255 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIV-GDGPLRDELE-ALIAELGLEDRVTLLGAKSQEEVRELLRA 255 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEE-ECCccHHHHH-HHHHHcCCCCeEEECCcCChHHHHHHHHh
Confidence 3466777787653 2333344444444433 3444443 33211 1111 1111 134678888999754 67888
Q ss_pred cCcCceee----------cCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHH
Q 048393 271 EATGCFLT----------HCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINE 340 (369)
Q Consensus 271 ~~~~~~I~----------hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ 340 (369)
+++ +|. -|..+++.||+++|+|+|+.+... ....+.+. ..|..+... +.+++.++|.+
T Consensus 256 adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~-~~g~~~~~~-----~~~~l~~~i~~ 323 (355)
T cd03799 256 ADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDG-ETGLLVPPG-----DPEALADAIER 323 (355)
T ss_pred CCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCC-CceEEeCCC-----CHHHHHHHHHH
Confidence 998 555 234579999999999999876432 22344444 578888743 88999999999
Q ss_pred HhcCCcH-HHHHHHHHHH
Q 048393 341 ILEGERG-KEIKQNADKW 357 (369)
Q Consensus 341 ~l~~~~~-~~~~~~a~~l 357 (369)
++++++. ..+.+++++.
T Consensus 324 ~~~~~~~~~~~~~~a~~~ 341 (355)
T cd03799 324 LLDDPELRREMGEAGRAR 341 (355)
T ss_pred HHhCHHHHHHHHHHHHHH
Confidence 9988743 4555655543
No 65
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.30 E-value=2.8e-05 Score=72.96 Aligned_cols=139 Identities=13% Similarity=0.240 Sum_probs=90.6
Q ss_pred EEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH---HhhcccCcCceeec
Q 048393 203 VYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL---GVLAHEATGCFLTH 279 (369)
Q Consensus 203 i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~~~~~I~h 279 (369)
.++..|+... ...+..+++++...+.++++. |.... .+.+.+...+|+.+.+++|+. .+++.+++-++-++
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~iv-G~g~~---~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~ 270 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVI-GDGPE---LDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAE 270 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEE-ECChh---HHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCc
Confidence 4556677653 233566777777777666554 43311 112222345789999999974 57889998333234
Q ss_pred CCh-hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC--cHHHHHHHHHH
Q 048393 280 CGW-NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE--RGKEIKQNADK 356 (369)
Q Consensus 280 gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~~~a~~ 356 (369)
-|. .++.||+++|+|+|+....+ ....+++. ..|+.++.+ +.+++.++|.++++|+ .+..+++++++
T Consensus 271 e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~~-----~~~~la~~i~~l~~~~~~~~~~~~~~~~~ 340 (351)
T cd03804 271 EDFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEEQ-----TVESLAAAVERFEKNEDFDPQAIRAHAER 340 (351)
T ss_pred CCCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCCC-----CHHHHHHHHHHHHhCcccCHHHHHHHHHh
Confidence 333 46789999999999976533 33445555 678888743 7889999999999887 23556665554
Q ss_pred H
Q 048393 357 W 357 (369)
Q Consensus 357 l 357 (369)
.
T Consensus 341 ~ 341 (351)
T cd03804 341 F 341 (351)
T ss_pred c
Confidence 3
No 66
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.30 E-value=0.00015 Score=68.08 Aligned_cols=203 Identities=21% Similarity=0.180 Sum_probs=108.3
Q ss_pred hHhhhHHHHHHHhcCCCceeeeC-ccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHH
Q 048393 138 FYELEKEVTEWLGKQHWLLRTIG-PTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKME 216 (369)
Q Consensus 138 ~~ele~~~~~~~~~~~~~~~~vG-p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~ 216 (369)
...||+ +.+.+.+.++.||| |+...+.. ..+ .....+.+ ..+++++|.+-.||-...-..
T Consensus 140 ifPFE~---~~y~~~g~~~~~VGHPl~d~~~~--------------~~~-~~~~~~~~-l~~~~~iIaLLPGSR~~EI~r 200 (373)
T PF02684_consen 140 IFPFEP---EFYKKHGVPVTYVGHPLLDEVKP--------------EPD-RAEAREKL-LDPDKPIIALLPGSRKSEIKR 200 (373)
T ss_pred CCcccH---HHHhccCCCeEEECCcchhhhcc--------------CCC-HHHHHHhc-CCCCCcEEEEeCCCCHHHHHH
Confidence 445665 45667777899999 77543210 011 33333333 335677999999997531111
Q ss_pred HHHHHHHH---HHh--CCCcEEEEEeCCccCCCCcchhcccCCCcEEEec-cChHHhhcccCcCceeecCChhhHHHHHh
Q 048393 217 QMEELAWG---LKA--SDKYFLWVVRESEQSKLPENFSDETSQKGLVVNW-CPQLGVLAHEATGCFLTHCGWNSTMEALG 290 (369)
Q Consensus 217 ~~~~~~~~---l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~iL~~~~~~~~I~hgG~~s~~eal~ 290 (369)
.+-.++++ +.+ .+..+++..........-.........++.+... -.-.+++..+++ .+.-.|. .+.|+..
T Consensus 201 llP~~l~aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SGT-aTLE~Al 277 (373)
T PF02684_consen 201 LLPIFLEAAKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASGT-ATLEAAL 277 (373)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCCH-HHHHHHH
Confidence 12223333 222 3456665543221111000011111222333222 234478999988 7777764 5789999
Q ss_pred hCCceeecC-CCCChhHHHHHHHhhcC-ceE---EecCC---C--CCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 048393 291 LGVPMLAMP-QWSDQSTNAKYIMDVGK-MGL---KVPAD---E--KGIVRREAIAHCINEILEGERGKEIKQNADKWRNF 360 (369)
Q Consensus 291 ~GvP~i~~P-~~~dQ~~na~~~~~~~g-~g~---~~~~~---~--~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~ 360 (369)
+|+|||++= ...=.+.-|+++.+. . +|+ ..++. | .+++|++.|.+++.+++.|+ ..++..+...+.
T Consensus 278 ~g~P~Vv~Yk~~~lt~~iak~lvk~-~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~---~~~~~~~~~~~~ 353 (373)
T PF02684_consen 278 LGVPMVVAYKVSPLTYFIAKRLVKV-KYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP---EKRKKQKELFRE 353 (373)
T ss_pred hCCCEEEEEcCcHHHHHHHHHhhcC-CEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHH
Confidence 999999753 333445566666544 2 121 01110 0 12789999999999999998 444444445555
Q ss_pred HHHHHh
Q 048393 361 AKEAVA 366 (369)
Q Consensus 361 ~~~~~~ 366 (369)
+++...
T Consensus 354 ~~~~~~ 359 (373)
T PF02684_consen 354 IRQLLG 359 (373)
T ss_pred HHHhhh
Confidence 554433
No 67
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.29 E-value=0.00043 Score=66.68 Aligned_cols=90 Identities=18% Similarity=0.220 Sum_probs=65.3
Q ss_pred CcEEE-eccChH---HhhcccCcCceee-c------CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecC
Q 048393 255 KGLVV-NWCPQL---GVLAHEATGCFLT-H------CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPA 323 (369)
Q Consensus 255 ~~~~~-~~~p~~---~iL~~~~~~~~I~-h------gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~ 323 (369)
++.+. +|+|.. ++|+.+|+ ++. + |-.++++||+++|+|+|+... ....+.+++. +.|+.+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~~-~~G~lv~- 366 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKHG-ENGLVFG- 366 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcCC-CCEEEEC-
Confidence 44444 688755 57899999 663 1 124579999999999998543 2455677777 7898873
Q ss_pred CCCCCcCHHHHHHHHHHHhcC---CcH-HHHHHHHHHHH
Q 048393 324 DEKGIVRREAIAHCINEILEG---ERG-KEIKQNADKWR 358 (369)
Q Consensus 324 ~~~~~~~~~~l~~~i~~~l~~---~~~-~~~~~~a~~l~ 358 (369)
+.+++.++|.++++| ++. ..|.+++++.+
T Consensus 367 ------d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 ------DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred ------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 589999999999998 543 66777776655
No 68
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.28 E-value=9.2e-05 Score=70.01 Aligned_cols=100 Identities=21% Similarity=0.192 Sum_probs=72.9
Q ss_pred CCcEEEeccChH-HhhcccCcCceeec--CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcC
Q 048393 254 QKGLVVNWCPQL-GVLAHEATGCFLTH--CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVR 330 (369)
Q Consensus 254 ~~~~~~~~~p~~-~iL~~~~~~~~I~h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~ 330 (369)
+++.+.++.++. .+++.+++-++.++ |...+++||+++|+|+|+..... .....++.. ..|..++.. +
T Consensus 261 ~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~~-----d 331 (372)
T cd04949 261 DYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPKG-----D 331 (372)
T ss_pred ceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCCC-----c
Confidence 456777777666 78999999555555 33569999999999999865331 134455555 678888743 8
Q ss_pred HHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHH
Q 048393 331 REAIAHCINEILEGERG-KEIKQNADKWRNFAK 362 (369)
Q Consensus 331 ~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~~~~ 362 (369)
.+++.++|.++++|++. ..+.+++++.++.+.
T Consensus 332 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s 364 (372)
T cd04949 332 IEALAEAIIELLNDPKLLQKFSEAAYENAERYS 364 (372)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999998743 677777777665544
No 69
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.23 E-value=0.00078 Score=62.50 Aligned_cols=135 Identities=19% Similarity=0.147 Sum_probs=82.6
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHHhCCCcEEEEE-eCCcc-CCCCcchh-cccCCCcEEEeccChH---HhhcccC
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLKASDKYFLWVV-RESEQ-SKLPENFS-DETSQKGLVVNWCPQL---GVLAHEA 272 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~-~~~~~-~~~~~~~~-~~~~~~~~~~~~~p~~---~iL~~~~ 272 (369)
+..+++..|+... ...+.+-..++.+...+..+.+.+ +.... ..+..... ....+++.+.+++++. .++..++
T Consensus 201 ~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 280 (377)
T cd03798 201 DKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAAD 280 (377)
T ss_pred CceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcC
Confidence 4467777787753 223333333344433222333332 32211 11111000 1123578888999865 6788888
Q ss_pred cCcee----ecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 273 TGCFL----THCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 273 ~~~~I----~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
+ +| +-|..+++.||+++|+|+|+-+.. .....+.+. +.|..++. -+.+++.+++.+++++++
T Consensus 281 ~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~~-~~g~~~~~-----~~~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 281 V--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITDG-ENGLLVPP-----GDPEALAEAILRLLADPW 346 (377)
T ss_pred e--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcCC-cceeEECC-----CCHHHHHHHHHHHhcCcH
Confidence 8 55 235567899999999999986643 345566666 77787774 389999999999999873
No 70
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.22 E-value=0.0011 Score=61.82 Aligned_cols=150 Identities=19% Similarity=0.181 Sum_probs=88.2
Q ss_pred CCceEEEEeCcccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCcc-CCCCcchh---c--ccCCCcEEEeccChH-Hhh
Q 048393 199 NGSVVYVSFGSMAT-LKMEQMEELAWGLKAS--DKYFLWVVRESEQ-SKLPENFS---D--ETSQKGLVVNWCPQL-GVL 268 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~-~~~~~~~~---~--~~~~~~~~~~~~p~~-~iL 268 (369)
++..+++..|+... .....+-+.+..+... +..+++ +|.... ..+...+. . ...+++.+.+|.++. .+|
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~i-vG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l 261 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLI-VGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAY 261 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEE-EECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHH
Confidence 34467777787753 3344455555555543 344443 343321 11111110 1 123568888886544 789
Q ss_pred cccCcCceeec--C-ChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhc-C
Q 048393 269 AHEATGCFLTH--C-GWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILE-G 344 (369)
Q Consensus 269 ~~~~~~~~I~h--g-G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~-~ 344 (369)
+.+++-++-++ - ..+++.||+++|+|+|+.-.. .....+.+. +.|..+..+ +.+++.++|.+++. +
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~~-----~~~~l~~~i~~~~~~~ 331 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETVRPG-ETGLLVPPG-----DAEALAQALDQILSLL 331 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHHhCC-CceEEeCCC-----CHHHHHHHHHHHHhhC
Confidence 99998333331 2 246999999999999986533 234555555 678888743 88999999976654 4
Q ss_pred Cc-HHHHHHHHHHHHH
Q 048393 345 ER-GKEIKQNADKWRN 359 (369)
Q Consensus 345 ~~-~~~~~~~a~~l~~ 359 (369)
++ ..++++++++..+
T Consensus 332 ~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 332 PEGRAKMFAKARMCVE 347 (355)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 42 2556666655543
No 71
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.20 E-value=0.0016 Score=60.97 Aligned_cols=93 Identities=16% Similarity=0.107 Sum_probs=65.7
Q ss_pred CCcEEEeccC-hH---HhhcccCcCceeecC----ChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCC
Q 048393 254 QKGLVVNWCP-QL---GVLAHEATGCFLTHC----GWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADE 325 (369)
Q Consensus 254 ~~~~~~~~~p-~~---~iL~~~~~~~~I~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 325 (369)
.++...+|++ +. .+++.+++ +|.-. ..+++.||+++|+|+|+....+ ....+.+. +.|..++.
T Consensus 244 ~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~-~~g~~~~~-- 314 (365)
T cd03825 244 FPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHG-VTGYLAKP-- 314 (365)
T ss_pred CceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCC-CceEEeCC--
Confidence 4677788988 43 57899998 77743 3589999999999999865432 22334444 56777763
Q ss_pred CCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Q 048393 326 KGIVRREAIAHCINEILEGERG-KEIKQNADKWR 358 (369)
Q Consensus 326 ~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~ 358 (369)
.+.+++.+++.+++++++. ..+.+++++..
T Consensus 315 ---~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 345 (365)
T cd03825 315 ---GDPEDLAEGIEWLLADPDEREELGEAARELA 345 (365)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 4789999999999988743 45555555543
No 72
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.18 E-value=0.0015 Score=62.70 Aligned_cols=146 Identities=12% Similarity=0.138 Sum_probs=86.7
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHh----CCCcEEEEEeCCcc-CCCCcchhcccCCCcEEEeccChH---Hhhccc
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKA----SDKYFLWVVRESEQ-SKLPENFSDETSQKGLVVNWCPQL---GVLAHE 271 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~----~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~ 271 (369)
+..+++..|+.... .-+..+++++.. .+.+++ .+|.+.. ..+.+-......+++.+.+|+|+. .+++.+
T Consensus 228 ~~~~i~~~G~l~~~--kg~~~li~a~~~l~~~~~~~l~-ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~a 304 (412)
T PRK10307 228 GKKIVLYSGNIGEK--QGLELVIDAARRLRDRPDLIFV-ICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMA 304 (412)
T ss_pred CCEEEEEcCccccc--cCHHHHHHHHHHhccCCCeEEE-EECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhc
Confidence 34677778888632 223444444432 224444 3443321 111111111112468888999865 578999
Q ss_pred CcCceeecCCh------hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 272 ATGCFLTHCGW------NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 272 ~~~~~I~hgG~------~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
|+.++.++.+. +.+.|++++|+|+|+....+.. ....++ +.|+.++.. +.+++.++|.++++|+
T Consensus 305 Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~---~~G~~~~~~-----d~~~la~~i~~l~~~~ 374 (412)
T PRK10307 305 DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE---GIGVCVEPE-----SVEALVAAIAALARQA 374 (412)
T ss_pred CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh---CCcEEeCCC-----CHHHHHHHHHHHHhCH
Confidence 98555555432 3478999999999998654321 112332 568888744 7899999999999887
Q ss_pred cH-HHHHHHHHHHH
Q 048393 346 RG-KEIKQNADKWR 358 (369)
Q Consensus 346 ~~-~~~~~~a~~l~ 358 (369)
+. +.+++++++..
T Consensus 375 ~~~~~~~~~a~~~~ 388 (412)
T PRK10307 375 LLRPKLGTVAREYA 388 (412)
T ss_pred HHHHHHHHHHHHHH
Confidence 43 56666666544
No 73
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.18 E-value=0.00053 Score=67.50 Aligned_cols=199 Identities=14% Similarity=0.075 Sum_probs=103.1
Q ss_pred hHhhhHHHHHHHhcCCCceeeeC-ccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHH
Q 048393 138 FYELEKEVTEWLGKQHWLLRTIG-PTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKME 216 (369)
Q Consensus 138 ~~ele~~~~~~~~~~~~~~~~vG-p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~ 216 (369)
...||.+ .+.+.+.++.+|| |+...+.. .+..++..+-+...+++++|-+-.||-...-..
T Consensus 368 IfPFE~~---~y~~~gv~v~yVGHPL~d~i~~---------------~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~r 429 (608)
T PRK01021 368 ILPFEQN---LFKDSPLRTVYLGHPLVETISS---------------FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILR 429 (608)
T ss_pred cCccCHH---HHHhcCCCeEEECCcHHhhccc---------------CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHH
Confidence 3456653 4556678899999 77543110 111333444444444667999999997632222
Q ss_pred HHHHHHHHHH--h--CCCcEEEEEeCCccCCCCcchhccc-CC---CcEEEeccChHHhhcccCcCceeecCChhhHHHH
Q 048393 217 QMEELAWGLK--A--SDKYFLWVVRESEQSKLPENFSDET-SQ---KGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEA 288 (369)
Q Consensus 217 ~~~~~~~~l~--~--~~~~~i~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~ea 288 (369)
.+-.++++.+ . .+.+++........ .+.+.+.. .. .+.++.--...++++.+|+ .+.-+|. .+.|+
T Consensus 430 llPv~l~aa~~~~l~~~l~fvvp~a~~~~---~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEa 503 (608)
T PRK01021 430 NLTIQVQAFLASSLASTHQLLVSSANPKY---DHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLET 503 (608)
T ss_pred HHHHHHHHHHHHHhccCeEEEEecCchhh---HHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHH
Confidence 2333444443 2 23455543222110 01111111 01 1122211012488999998 8888875 46799
Q ss_pred HhhCCceeecC-CCCChhHHHHHHHh-----------hcCceEEecCCC-CCCcCHHHHHHHHHHHhcCCcH-HHHHHHH
Q 048393 289 LGLGVPMLAMP-QWSDQSTNAKYIMD-----------VGKMGLKVPADE-KGIVRREAIAHCINEILEGERG-KEIKQNA 354 (369)
Q Consensus 289 l~~GvP~i~~P-~~~dQ~~na~~~~~-----------~~g~g~~~~~~~-~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a 354 (369)
..+|+|||++= ...=-+.-|+++.+ ..|-.+..+-=. ..++|++.|.+++ ++|.|++. +++++..
T Consensus 504 AL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l 582 (608)
T PRK01021 504 ALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDAC 582 (608)
T ss_pred HHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 99999999742 22223445566655 101111111000 1168999999997 88888732 4455555
Q ss_pred HHHHHHH
Q 048393 355 DKWRNFA 361 (369)
Q Consensus 355 ~~l~~~~ 361 (369)
+++.+.+
T Consensus 583 ~~lr~~L 589 (608)
T PRK01021 583 RDLYQAM 589 (608)
T ss_pred HHHHHHh
Confidence 5544443
No 74
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.18 E-value=2.5e-05 Score=65.27 Aligned_cols=146 Identities=20% Similarity=0.265 Sum_probs=89.5
Q ss_pred CCCceEEEEeCcccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCcc-CCCCcchh-cccCCCcEEEeccC--hH-Hhhc
Q 048393 198 ANGSVVYVSFGSMAT-LKMEQMEELAWGLKA--SDKYFLWVVRESEQ-SKLPENFS-DETSQKGLVVNWCP--QL-GVLA 269 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~p--~~-~iL~ 269 (369)
++++.+++..|+... .....+-.++.-+.. .+.-.++.+|.... ..+..... .....++.+.++.+ +. +++.
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~ 91 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDELYK 91 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHHH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccccccccccccccccccccccccccccccccccccc
Confidence 355678888888764 233443333333321 23333444452211 00100000 12345788889988 33 7889
Q ss_pred ccCcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 270 HEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 270 ~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
.+++ +|+. +...++.||+++|+|+|+. +...+...+.+. ..|..++. .+.+++.++|.++++++
T Consensus 92 ~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~-~~g~~~~~-----~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 92 SSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDG-VNGFLFDP-----NDIEELADAIEKLLNDP 159 (172)
T ss_dssp HTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTT-TSEEEEST-----TSHHHHHHHHHHHHHHH
T ss_pred ccee--ccccccccccccccccccccccceeec----cccCCceeeccc-cceEEeCC-----CCHHHHHHHHHHHHCCH
Confidence 9998 7776 6677999999999999974 355666777777 77999884 38999999999999887
Q ss_pred cH-HHHHHHHH
Q 048393 346 RG-KEIKQNAD 355 (369)
Q Consensus 346 ~~-~~~~~~a~ 355 (369)
+. ..+.++++
T Consensus 160 ~~~~~l~~~~~ 170 (172)
T PF00534_consen 160 ELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 32 34444444
No 75
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.14 E-value=7.8e-05 Score=70.31 Aligned_cols=147 Identities=14% Similarity=0.183 Sum_probs=88.4
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhC--CCcEEEEEeCCc-cCCCCcchhc-ccCCCcEEEeccCh--H---Hhhccc
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKAS--DKYFLWVVRESE-QSKLPENFSD-ETSQKGLVVNWCPQ--L---GVLAHE 271 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~--~~~~i~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~p~--~---~iL~~~ 271 (369)
+.+++..|.........+..+++++... +..++ .+|... ...+.....+ ...+++.+.+|+++ . +.++.+
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~-ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~ 258 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLH-IIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNV 258 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEE-EEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcC
Confidence 3566777776432222355566666543 33443 344332 1111111111 23467888888753 2 345567
Q ss_pred CcCceeec----CChhhHHHHHhhCCceeecC-CCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 272 ATGCFLTH----CGWNSTMEALGLGVPMLAMP-QWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 272 ~~~~~I~h----gG~~s~~eal~~GvP~i~~P-~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
++ +|.. |-..++.||+++|+|+|+.- ..+ ....+++. ..|..++. -+.+++.++|.++++|++
T Consensus 259 d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~-~~G~lv~~-----~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 259 SA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPG-LNGELYTP-----GNIDEFVGKLNKVISGEV 326 (359)
T ss_pred cE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCC-CceEEECC-----CCHHHHHHHHHHHHhCcc
Confidence 77 6643 33579999999999999875 322 22345555 67888864 389999999999999885
Q ss_pred --H-HHHHHHHHHHHHH
Q 048393 347 --G-KEIKQNADKWRNF 360 (369)
Q Consensus 347 --~-~~~~~~a~~l~~~ 360 (369)
+ ..+++++++++..
T Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (359)
T PRK09922 327 KYQHDAIPNSIERFYEV 343 (359)
T ss_pred cCCHHHHHHHHHHhhHH
Confidence 2 5666676666554
No 76
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.14 E-value=0.00089 Score=65.70 Aligned_cols=94 Identities=18% Similarity=0.213 Sum_probs=65.8
Q ss_pred CCCcEEEeccChHHhhcccCcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhh-----cCceEEecC
Q 048393 253 SQKGLVVNWCPQLGVLAHEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDV-----GKMGLKVPA 323 (369)
Q Consensus 253 ~~~~~~~~~~p~~~iL~~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-----~g~g~~~~~ 323 (369)
.+++.+.+...-.++++.+++ +|.- |-.+++.||+++|+|+|+-. .......+++. ...|..+..
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd----~g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATD----VGSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECC----CCChHHHhcCCcccccCCceEEECC
Confidence 357777775555588998888 6533 33479999999999999843 33344555552 026888874
Q ss_pred CCCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHH
Q 048393 324 DEKGIVRREAIAHCINEILEGERG-KEIKQNADKW 357 (369)
Q Consensus 324 ~~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l 357 (369)
.+.+++.++|.++++|++. +.+.+++++.
T Consensus 427 -----~d~~~la~ai~~ll~~~~~~~~~~~~a~~~ 456 (475)
T cd03813 427 -----ADPEALARAILRLLKDPELRRAMGEAGRKR 456 (475)
T ss_pred -----CCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 3899999999999998743 5566665543
No 77
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.11 E-value=0.0038 Score=58.46 Aligned_cols=103 Identities=18% Similarity=0.247 Sum_probs=78.3
Q ss_pred CcEEEeccChH-HhhcccCc----CceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCc
Q 048393 255 KGLVVNWCPQL-GVLAHEAT----GCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIV 329 (369)
Q Consensus 255 ~~~~~~~~p~~-~iL~~~~~----~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~ 329 (369)
++.+.+-+-.+ .+++-+++ +-|+-+||+| ..|++++|+|+|.=|...-|..-++++.+. |+|+.++
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~-ga~~~v~------- 371 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQA-GAGLQVE------- 371 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhc-CCeEEEC-------
Confidence 45666554433 55666554 1145588887 789999999999999999999999999999 9999987
Q ss_pred CHHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHh
Q 048393 330 RREAIAHCINEILEGERG-KEIKQNADKWRNFAKEAVA 366 (369)
Q Consensus 330 ~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~~~~~~~~ 366 (369)
+++.+.+++..+++|++. +.|.+++..+-+..+.+.+
T Consensus 372 ~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~gal~ 409 (419)
T COG1519 372 DADLLAKAVELLLADEDKREAYGRAGLEFLAQNRGALA 409 (419)
T ss_pred CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 378888999888887654 7777777777666665543
No 78
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.06 E-value=0.001 Score=62.91 Aligned_cols=92 Identities=14% Similarity=0.160 Sum_probs=64.8
Q ss_pred CCcEEEeccChH-HhhcccCcCcee--ec--CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCC
Q 048393 254 QKGLVVNWCPQL-GVLAHEATGCFL--TH--CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGI 328 (369)
Q Consensus 254 ~~~~~~~~~p~~-~iL~~~~~~~~I--~h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 328 (369)
.++.+.++..+. ++++.+|+ +| ++ |-.+++.||+++|+|+|+-... .+.+.+++- ..|..++..
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i~~~-~~g~~~~~~---- 323 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELVQHG-VTGALVPPG---- 323 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHhcCC-CceEEeCCC----
Confidence 345555655444 78999998 66 33 4457999999999999996643 345566555 678888743
Q ss_pred cCHHHHHHHHHHHhcCCcH-HHHHHHHHHH
Q 048393 329 VRREAIAHCINEILEGERG-KEIKQNADKW 357 (369)
Q Consensus 329 ~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l 357 (369)
+.+++.++|.+++++++. ..+.+++++.
T Consensus 324 -d~~~la~~i~~l~~~~~~~~~~~~~a~~~ 352 (374)
T TIGR03088 324 -DAVALARALQPYVSDPAARRAHGAAGRAR 352 (374)
T ss_pred -CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 789999999999988632 4455555543
No 79
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.05 E-value=0.00085 Score=61.73 Aligned_cols=133 Identities=17% Similarity=0.200 Sum_probs=79.2
Q ss_pred CCceEEEEeCcccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCcc-CCCCcchhc--ccCCCcEEEeccChH-Hhhccc
Q 048393 199 NGSVVYVSFGSMAT-LKMEQMEELAWGLKAS--DKYFLWVVRESEQ-SKLPENFSD--ETSQKGLVVNWCPQL-GVLAHE 271 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~p~~-~iL~~~ 271 (369)
+++.+++..|+... .....+-+.+..+... +..+++. |.... ..+. .... ...+++.+.++.++. ++++.+
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~-G~~~~~~~~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 264 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVIL-GDGPLREELE-ALAKELGLADRVHFLGFQSNPYPYLKAA 264 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEE-cCCccHHHHH-HHHHhcCCCccEEEecccCCHHHHHHhC
Confidence 34477788888763 2223333333333332 4454443 43211 1111 1111 123567788887765 789999
Q ss_pred CcCceee--c--CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHH---HHHHHHHhcC
Q 048393 272 ATGCFLT--H--CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAI---AHCINEILEG 344 (369)
Q Consensus 272 ~~~~~I~--h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l---~~~i~~~l~~ 344 (369)
++ +|. + |..+++.||+++|+|+|+.... ...+.+++. ..|..++.+ +.+.+ .+++.+++.+
T Consensus 265 d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~~-----~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 265 DL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVPVG-----DEAALAAAALALLDLLLD 332 (353)
T ss_pred CE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEECCC-----CHHHHHHHHHHHHhccCC
Confidence 98 663 2 3457899999999999986443 556677777 889888744 67777 5556566666
Q ss_pred C
Q 048393 345 E 345 (369)
Q Consensus 345 ~ 345 (369)
+
T Consensus 333 ~ 333 (353)
T cd03811 333 P 333 (353)
T ss_pred h
Confidence 5
No 80
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.05 E-value=0.0018 Score=60.27 Aligned_cols=91 Identities=19% Similarity=0.148 Sum_probs=63.6
Q ss_pred CCCcEEEeccChH---HhhcccCcCceeecC----ChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCC
Q 048393 253 SQKGLVVNWCPQL---GVLAHEATGCFLTHC----GWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADE 325 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~~~~~~I~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 325 (369)
.+++.+.+|+++. .++..+++ +|.-. -.+++.||+++|+|+|+-+..+ ....+. . +.|...+.
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~-~-~~~~~~~~-- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIE-Y-GCGWVVDD-- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhh-c-CceEEeCC--
Confidence 3678888999954 56888888 55432 2478999999999999976433 233333 2 56776653
Q ss_pred CCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHH
Q 048393 326 KGIVRREAIAHCINEILEGERG-KEIKQNADKW 357 (369)
Q Consensus 326 ~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l 357 (369)
+.+++.++|.+++++++- +.+.+++++.
T Consensus 331 ----~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 ----DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ----ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 449999999999998632 4566666555
No 81
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.05 E-value=0.0018 Score=62.91 Aligned_cols=92 Identities=18% Similarity=0.155 Sum_probs=64.8
Q ss_pred CCCcEEEeccChHH---hhccc----CcCceeecC---C-hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEe
Q 048393 253 SQKGLVVNWCPQLG---VLAHE----ATGCFLTHC---G-WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKV 321 (369)
Q Consensus 253 ~~~~~~~~~~p~~~---iL~~~----~~~~~I~hg---G-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~ 321 (369)
.+++.+.+++++.+ +++.+ |+ ||... | ..+++||+++|+|+|+-...+ ..+.+.+. ..|+.+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~-~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANC-RNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCC-CcEEEe
Confidence 35677778777654 46655 55 77643 3 469999999999999876432 44555555 578888
Q ss_pred cCCCCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHH
Q 048393 322 PADEKGIVRREAIAHCINEILEGERG-KEIKQNADK 356 (369)
Q Consensus 322 ~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~ 356 (369)
+.. +.+++.++|.++++|++. ..+.+++++
T Consensus 389 ~~~-----d~~~la~~i~~ll~~~~~~~~~~~~a~~ 419 (439)
T TIGR02472 389 DVL-----DLEAIASALEDALSDSSQWQLWSRNGIE 419 (439)
T ss_pred CCC-----CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 754 789999999999998743 445555544
No 82
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=98.03 E-value=0.0014 Score=64.56 Aligned_cols=102 Identities=21% Similarity=0.159 Sum_probs=69.9
Q ss_pred CCCcEEEeccChHHhhcccCcCceee---cCC-hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCC
Q 048393 253 SQKGLVVNWCPQLGVLAHEATGCFLT---HCG-WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGI 328 (369)
Q Consensus 253 ~~~~~~~~~~p~~~iL~~~~~~~~I~---hgG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 328 (369)
.+++.+.++.+..++++.+++ ||. .=| ..+++||+++|+|+|+.-..+ .+...+++- ..|..++...+ .
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g-~nG~lv~~~~~-~ 447 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDN-KNGYLIPIDEE-E 447 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCC-CCEEEEeCCcc-c
Confidence 356777888877799999998 664 223 369999999999999965421 234455555 57888863200 1
Q ss_pred cC----HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 048393 329 VR----REAIAHCINEILEGERGKEIKQNADKWRNFA 361 (369)
Q Consensus 329 ~~----~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~ 361 (369)
-+ .+.|+++|.++++++....+.+++++.++.+
T Consensus 448 ~d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~f 484 (500)
T TIGR02918 448 DDEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEGF 484 (500)
T ss_pred cchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhc
Confidence 12 7889999999996544467777777766553
No 83
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.03 E-value=0.0011 Score=63.54 Aligned_cols=91 Identities=22% Similarity=0.214 Sum_probs=65.6
Q ss_pred CCcEEEeccChH-HhhcccCcCcee--ec--CCh-hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCC
Q 048393 254 QKGLVVNWCPQL-GVLAHEATGCFL--TH--CGW-NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKG 327 (369)
Q Consensus 254 ~~~~~~~~~p~~-~iL~~~~~~~~I--~h--gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~ 327 (369)
+++.+.+++++. .+++++++ +| ++ .|. +.+.||+++|+|+|+-+...+.. .+.. |.|+.+. .
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~-~--- 347 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA-A--- 347 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC-C---
Confidence 568888999866 78999999 66 33 344 46999999999999987543321 1223 6677765 3
Q ss_pred CcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Q 048393 328 IVRREAIAHCINEILEGERG-KEIKQNADKWR 358 (369)
Q Consensus 328 ~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~ 358 (369)
+.+++.++|.++++|++. +.+.+++++..
T Consensus 348 --~~~~la~ai~~ll~~~~~~~~~~~~ar~~v 377 (397)
T TIGR03087 348 --DPADFAAAILALLANPAEREELGQAARRRV 377 (397)
T ss_pred --CHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 789999999999998743 55666665543
No 84
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.02 E-value=0.0011 Score=69.41 Aligned_cols=96 Identities=21% Similarity=0.172 Sum_probs=65.7
Q ss_pred CCcEEEeccChH---HhhcccC--cCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCC
Q 048393 254 QKGLVVNWCPQL---GVLAHEA--TGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPAD 324 (369)
Q Consensus 254 ~~~~~~~~~p~~---~iL~~~~--~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~ 324 (369)
+++.+.+++++. .++..++ .++||.- |=..+++||+++|+|+|+-...+ ....++.. ..|+.++..
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g-~nGlLVdP~ 622 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVL-DNGLLVDPH 622 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccC-CcEEEECCC
Confidence 567777888765 4566552 1227763 22369999999999999986533 22344444 568888743
Q ss_pred CCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHHH
Q 048393 325 EKGIVRREAIAHCINEILEGERG-KEIKQNADKWRN 359 (369)
Q Consensus 325 ~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~ 359 (369)
+.+.|.++|.++++|++. ..+.+++++..+
T Consensus 623 -----D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~ 653 (1050)
T TIGR02468 623 -----DQQAIADALLKLVADKQLWAECRQNGLKNIH 653 (1050)
T ss_pred -----CHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 889999999999998753 556666655443
No 85
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.02 E-value=0.0031 Score=58.35 Aligned_cols=89 Identities=24% Similarity=0.322 Sum_probs=60.4
Q ss_pred CCcEEEeccChH-HhhcccCcCceeecCC----hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCC
Q 048393 254 QKGLVVNWCPQL-GVLAHEATGCFLTHCG----WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGI 328 (369)
Q Consensus 254 ~~~~~~~~~p~~-~iL~~~~~~~~I~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 328 (369)
+++.+.+...+. .+++.+++ +|.... .+++.||+++|+|+|+.... .+...+.+ .|..+...
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~~~e~~~~---~g~~~~~~---- 317 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDVG----DNAELVGD---TGFLVPPG---- 317 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCCC----ChHHHhhc---CCEEeCCC----
Confidence 455665555444 78999998 776544 37999999999999985433 34444444 35666533
Q ss_pred cCHHHHHHHHHHHhcCCcH-HHHHHHHHH
Q 048393 329 VRREAIAHCINEILEGERG-KEIKQNADK 356 (369)
Q Consensus 329 ~~~~~l~~~i~~~l~~~~~-~~~~~~a~~ 356 (369)
+.+++.+++.+++++++. ..+.+++++
T Consensus 318 -~~~~l~~~i~~l~~~~~~~~~~~~~~~~ 345 (365)
T cd03807 318 -DPEALAEAIEALLADPALRQALGEAARE 345 (365)
T ss_pred -CHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 789999999999988632 344444443
No 86
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.01 E-value=0.002 Score=65.60 Aligned_cols=96 Identities=23% Similarity=0.279 Sum_probs=66.2
Q ss_pred CCCcEEEeccChH-HhhcccCcCceee---cCC-hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCC
Q 048393 253 SQKGLVVNWCPQL-GVLAHEATGCFLT---HCG-WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKG 327 (369)
Q Consensus 253 ~~~~~~~~~~p~~-~iL~~~~~~~~I~---hgG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~ 327 (369)
.+++.+.+|.++. .+|+.+++ ||. +.| .++++||+++|+|+|+.... ...+.+.+- ..|+.++.+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg-~~GlLv~~~--- 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEG-VTGLTLPAD--- 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCC-CCEEEeCCC---
Confidence 4678888888765 78999998 664 344 47999999999999997643 244556555 679888765
Q ss_pred CcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Q 048393 328 IVRREAIAHCINEILEGERG-KEIKQNADKWR 358 (369)
Q Consensus 328 ~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~ 358 (369)
+.+.+++.+++.+++.+... ..+++++++..
T Consensus 643 d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 643 TVTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred CCChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 55666777777666543211 26666665543
No 87
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.96 E-value=0.00048 Score=64.49 Aligned_cols=131 Identities=15% Similarity=0.192 Sum_probs=78.4
Q ss_pred CCCceEEEEeCccccCC----HHHHHHHHHHHHhC-CCcEEEEEeCCc--cCCCCcchhcccCCCcEEEeccCh---HHh
Q 048393 198 ANGSVVYVSFGSMATLK----MEQMEELAWGLKAS-DKYFLWVVRESE--QSKLPENFSDETSQKGLVVNWCPQ---LGV 267 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~----~~~~~~~~~~l~~~-~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~---~~i 267 (369)
.+++.++|++=...... ...+.++++++.+. +.++||.++... ...+.+. ..+. +|+.+..-++. ..+
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~-l~~~-~~v~~~~~l~~~~~l~l 255 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEK-LKKY-DNVRLIEPLGYEEYLSL 255 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHH-HTT--TTEEEE----HHHHHHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHH-hccc-CCEEEECCCCHHHHHHH
Confidence 46679999885555444 34566666666665 788999988432 1111111 1222 37777765554 478
Q ss_pred hcccCcCceeecCChhhHH-HHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 268 LAHEATGCFLTHCGWNSTM-EALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 268 L~~~~~~~~I~hgG~~s~~-eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
|+++++ +||-.| +++ ||.++|+|.|.+=..++.+.--. . |..+.+. .+.++|.+++.+++++.
T Consensus 256 l~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRqe~r~----~-~~nvlv~------~~~~~I~~ai~~~l~~~ 319 (346)
T PF02350_consen 256 LKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQEGRE----R-GSNVLVG------TDPEAIIQAIEKALSDK 319 (346)
T ss_dssp HHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-HHHHH----T-TSEEEET------SSHHHHHHHHHHHHH-H
T ss_pred HhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCHHHHh----h-cceEEeC------CCHHHHHHHHHHHHhCh
Confidence 899999 999998 666 99999999999944444443322 3 5565543 58999999999999873
No 88
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.96 E-value=0.0019 Score=61.43 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=66.3
Q ss_pred CCCcEEEeccChH---HhhcccCcCceeecC----ChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCC
Q 048393 253 SQKGLVVNWCPQL---GVLAHEATGCFLTHC----GWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADE 325 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~~~~~~I~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 325 (369)
.+++.+.+++|+. .+|..+++ ++... -..++.||+++|+|+|+.-..+ ....+.+. +.|..++
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~-~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDG-ETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccC-CceEEeC---
Confidence 4678899999876 57888888 66321 1357899999999999864432 33445555 6687764
Q ss_pred CCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHH
Q 048393 326 KGIVRREAIAHCINEILEGERG-KEIKQNADKW 357 (369)
Q Consensus 326 ~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l 357 (369)
. +.+++.++|.+++++++. ..+.+++++.
T Consensus 349 --~-~~~~~a~~i~~l~~~~~~~~~~~~~a~~~ 378 (392)
T cd03805 349 --P-TPEEFAEAMLKLANDPDLADRMGAAGRKR 378 (392)
T ss_pred --C-CHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 3 788999999999998743 5666666554
No 89
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.95 E-value=0.0023 Score=59.73 Aligned_cols=134 Identities=16% Similarity=0.107 Sum_probs=78.8
Q ss_pred CCceEEEEeCcccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCcc-CCCCcchh-cccCCCcEEEeccChH-HhhcccC
Q 048393 199 NGSVVYVSFGSMAT-LKMEQMEELAWGLKAS--DKYFLWVVRESEQ-SKLPENFS-DETSQKGLVVNWCPQL-GVLAHEA 272 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~p~~-~iL~~~~ 272 (369)
.+..+++..|+... .....+-+.+..+.+. +.++++. |.... ..+..... ....+++.+.++..+. +++..++
T Consensus 190 ~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~iv-G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 268 (358)
T cd03812 190 EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLV-GDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMD 268 (358)
T ss_pred CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEE-eCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcC
Confidence 34467777788753 2333344444444332 3444443 43221 11111111 1223567788875554 7899999
Q ss_pred cCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 273 TGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 273 ~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
+ +|.- |-.++++||+++|+|+|+-...+ ....+.+ +.|..... -+.+++.++|.++++|++
T Consensus 269 i--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~~-----~~~~~~a~~i~~l~~~~~ 333 (358)
T cd03812 269 V--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSLD-----ESPEIWAEEILKLKSEDR 333 (358)
T ss_pred E--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeCC-----CCHHHHHHHHHHHHhCcc
Confidence 8 6643 44689999999999999865443 2223333 44555442 267999999999999984
No 90
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.88 E-value=0.00018 Score=55.99 Aligned_cols=109 Identities=13% Similarity=0.156 Sum_probs=72.3
Q ss_pred EEEEeCccccCCHHHHH--HHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEec--cChH-HhhcccCcCcee
Q 048393 203 VYVSFGSMATLKMEQME--ELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNW--CPQL-GVLAHEATGCFL 277 (369)
Q Consensus 203 i~vs~Gs~~~~~~~~~~--~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~-~iL~~~~~~~~I 277 (369)
|+|+-||....-...+. ++.+-.+....++|.++|.++.... .+ ..+.+| .+-. .+...+++ +|
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~kpv-ag--------l~v~~F~~~~kiQsli~darI--VI 70 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDIKPV-AG--------LRVYGFDKEEKIQSLIHDARI--VI 70 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCcccc-cc--------cEEEeechHHHHHHHhhcceE--EE
Confidence 68899998531111111 1223233345688999988643221 11 245444 3433 56667776 99
Q ss_pred ecCChhhHHHHHhhCCceeecCCC--------CChhHHHHHHHhhcCceEEecC
Q 048393 278 THCGWNSTMEALGLGVPMLAMPQW--------SDQSTNAKYIMDVGKMGLKVPA 323 (369)
Q Consensus 278 ~hgG~~s~~eal~~GvP~i~~P~~--------~dQ~~na~~~~~~~g~g~~~~~ 323 (369)
+|+|.||+..++..++|.|++|-. .+|..-|..+.+. +.=+....
T Consensus 71 SHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~-~~vv~~sp 123 (161)
T COG5017 71 SHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEI-NYVVACSP 123 (161)
T ss_pred eccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhc-CceEEEcC
Confidence 999999999999999999999953 3688889888888 76666653
No 91
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.85 E-value=0.00024 Score=68.25 Aligned_cols=93 Identities=18% Similarity=0.262 Sum_probs=68.3
Q ss_pred CCCcEEEeccChH---HhhcccCcCceee--c-------CCh-hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceE
Q 048393 253 SQKGLVVNWCPQL---GVLAHEATGCFLT--H-------CGW-NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGL 319 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~~~~~~I~--h-------gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~ 319 (369)
.+++.+.+|+|+. ++++.+|+ ||. + =|. ++++||+++|+|+|+-...+ ..+.+++- ..|+
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~-~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEAD-KSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCC-CceE
Confidence 4678889999876 57889998 664 2 233 67999999999999875432 34455555 6788
Q ss_pred EecCCCCCCcCHHHHHHHHHHHhc-CCcH-HHHHHHHHHH
Q 048393 320 KVPADEKGIVRREAIAHCINEILE-GERG-KEIKQNADKW 357 (369)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~i~~~l~-~~~~-~~~~~~a~~l 357 (369)
.++.. +.+++.++|.++++ |++. +.+.+++++.
T Consensus 351 lv~~~-----d~~~la~ai~~l~~~d~~~~~~~~~~ar~~ 385 (406)
T PRK15427 351 LVPEN-----DAQALAQRLAAFSQLDTDELAPVVKRAREK 385 (406)
T ss_pred EeCCC-----CHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 88744 79999999999998 7743 5566666544
No 92
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.82 E-value=0.00079 Score=64.68 Aligned_cols=150 Identities=13% Similarity=0.172 Sum_probs=88.2
Q ss_pred CceEEEEeCccccC-CHHHHHHHHHHHHhC--CCcEEEEE-eCCcc-CCCCcchhc-ccCCCcEEEeccChH---Hhhcc
Q 048393 200 GSVVYVSFGSMATL-KMEQMEELAWGLKAS--DKYFLWVV-RESEQ-SKLPENFSD-ETSQKGLVVNWCPQL---GVLAH 270 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~-~~~~~~~~~~~l~~~--~~~~i~~~-~~~~~-~~~~~~~~~-~~~~~~~~~~~~p~~---~iL~~ 270 (369)
+...+++.|..... ....+-+.+..+.+. +..+.|.. |.+.. ..+...... ...+++.+.+|+++. .++..
T Consensus 229 ~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~ 308 (407)
T cd04946 229 DTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKE 308 (407)
T ss_pred CCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhh
Confidence 34667777887642 233322222233222 24666653 33211 111111100 122467788999976 45555
Q ss_pred cCcCceeecCC----hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 271 EATGCFLTHCG----WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 271 ~~~~~~I~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
+++.+||...- .++++||+++|+|+|+-... ...+.+.+. +.|..+... -+.+++.++|.++++|++
T Consensus 309 ~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i~~~-~~G~l~~~~----~~~~~la~~I~~ll~~~~ 379 (407)
T cd04946 309 NPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIVDNG-GNGLLLSKD----PTPNELVSSLSKFIDNEE 379 (407)
T ss_pred cCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHhcCC-CcEEEeCCC----CCHHHHHHHHHHHHhCHH
Confidence 44444775543 46899999999999985433 345566555 588887642 378999999999999874
Q ss_pred H-HHHHHHHHHHH
Q 048393 347 G-KEIKQNADKWR 358 (369)
Q Consensus 347 ~-~~~~~~a~~l~ 358 (369)
. ..+++++++.-
T Consensus 380 ~~~~m~~~ar~~~ 392 (407)
T cd04946 380 EYQTMREKAREKW 392 (407)
T ss_pred HHHHHHHHHHHHH
Confidence 3 55666666543
No 93
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.79 E-value=0.00027 Score=62.22 Aligned_cols=141 Identities=16% Similarity=0.138 Sum_probs=100.6
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcc--cCCCcEEEeccChH-HhhcccCcCce
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQL-GVLAHEATGCF 276 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~-~iL~~~~~~~~ 276 (369)
..-|+|++|..- +.+...+++..+...++.+-.+++..+ .-.++...+ ..+|+.+......+ .++..+++ .
T Consensus 158 ~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~--p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~--a 231 (318)
T COG3980 158 KRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSN--PTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL--A 231 (318)
T ss_pred hheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCC--cchhHHHHHHhhCCCeeeEecchhHHHHHHhcch--h
Confidence 336899998763 334566777888777777666776432 112222221 23566665554444 79999999 9
Q ss_pred eecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 048393 277 LTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNAD 355 (369)
Q Consensus 277 I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~ 355 (369)
|+-|| .|+.|++.-|+|.+++|+...|---|...+.+ |+-..+.-+ ++.+.+...+.++.+|. ..+++.-
T Consensus 232 I~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~l-g~~~~l~~~----l~~~~~~~~~~~i~~d~---~~rk~l~ 301 (318)
T COG3980 232 ISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEAL-GIIKQLGYH----LKDLAKDYEILQIQKDY---ARRKNLS 301 (318)
T ss_pred eeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHhc-CchhhccCC----CchHHHHHHHHHhhhCH---HHhhhhh
Confidence 99877 68999999999999999999999999999999 776666543 56777777778888887 5555543
No 94
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.71 E-value=0.0024 Score=59.10 Aligned_cols=203 Identities=18% Similarity=0.162 Sum_probs=110.3
Q ss_pred HhhhHHHHHHHhcCCCceeeeC-ccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCC---
Q 048393 139 YELEKEVTEWLGKQHWLLRTIG-PTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLK--- 214 (369)
Q Consensus 139 ~ele~~~~~~~~~~~~~~~~vG-p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~--- 214 (369)
..||+ ..+.+.+.+..||| |+...+. ..+.++...+-+....+++++.+-.||-...-
T Consensus 144 lPFE~---~~y~k~g~~~~yVGHpl~d~i~---------------~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl 205 (381)
T COG0763 144 LPFEP---AFYDKFGLPCTYVGHPLADEIP---------------LLPDREAAREKLGIDADEKTLALLPGSRRSEIRRL 205 (381)
T ss_pred cCCCH---HHHHhcCCCeEEeCChhhhhcc---------------ccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHH
Confidence 34565 34555556688999 6654321 11224445555655567779999999986311
Q ss_pred HHHHHHHHHHHHh--CCCcEEEEEeCCccCCCCcchhcccC--CCcEEEeccChHHhhcccCcCceeecCChhhHHHHHh
Q 048393 215 MEQMEELAWGLKA--SDKYFLWVVRESEQSKLPENFSDETS--QKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALG 290 (369)
Q Consensus 215 ~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~ 290 (369)
...+...++.+.+ .+.+|+.-+.......+......... .+..+.+. --.+++..+|+ .+.-+|.. +.|+..
T Consensus 206 ~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~aD~--al~aSGT~-tLE~aL 281 (381)
T COG0763 206 LPPFVQAAQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDG-EKRKAFAAADA--ALAASGTA-TLEAAL 281 (381)
T ss_pred HHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCc-hHHHHHHHhhH--HHHhccHH-HHHHHH
Confidence 1222233333332 45677655443321111111110000 11111111 11267888888 88888754 579999
Q ss_pred hCCceeecC-CCCChhHHHHHHHhhcCceE---EecCC---C--CCCcCHHHHHHHHHHHhcCCc-HHHHHHHHHHHHHH
Q 048393 291 LGVPMLAMP-QWSDQSTNAKYIMDVGKMGL---KVPAD---E--KGIVRREAIAHCINEILEGER-GKEIKQNADKWRNF 360 (369)
Q Consensus 291 ~GvP~i~~P-~~~dQ~~na~~~~~~~g~g~---~~~~~---~--~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~~ 360 (369)
+|+|||+.= ...=-++-|++..+.+-+++ ..++. | ..+++++.|.+++.+++.|+. ...+++...++.+.
T Consensus 282 ~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~ 361 (381)
T COG0763 282 AGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQY 361 (381)
T ss_pred hCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHH
Confidence 999999742 11123344555554422232 00100 0 116899999999999999883 36777777777777
Q ss_pred HHH
Q 048393 361 AKE 363 (369)
Q Consensus 361 ~~~ 363 (369)
++.
T Consensus 362 l~~ 364 (381)
T COG0763 362 LRE 364 (381)
T ss_pred HcC
Confidence 654
No 95
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.68 E-value=0.0019 Score=61.53 Aligned_cols=93 Identities=15% Similarity=0.232 Sum_probs=65.6
Q ss_pred CCCcEEEeccChH---HhhcccCcCceeec----CCh-hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCC
Q 048393 253 SQKGLVVNWCPQL---GVLAHEATGCFLTH----CGW-NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPAD 324 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~~~~~~I~h----gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~ 324 (369)
..++.+.+++|+. .+++.+|+ +|.- -|. .++.||+++|+|+|+.... .+.+.+++. ..|..+..
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~~-~~G~~l~~- 327 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLEG-ITGYHLAE- 327 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhcccC-CceEEEeC-
Confidence 4567888898854 57999999 6643 332 5789999999999997653 244555555 67875432
Q ss_pred CCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHH
Q 048393 325 EKGIVRREAIAHCINEILEGERGKEIKQNADK 356 (369)
Q Consensus 325 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~ 356 (369)
..+.+++.++|.++++|++...+.+++++
T Consensus 328 ---~~d~~~la~~I~~ll~d~~~~~~~~~ar~ 356 (380)
T PRK15484 328 ---PMTSDSIISDINRTLADPELTQIAEQAKD 356 (380)
T ss_pred ---CCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 24899999999999998844445555443
No 96
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=97.65 E-value=0.061 Score=55.34 Aligned_cols=92 Identities=17% Similarity=0.109 Sum_probs=58.0
Q ss_pred CCcEEEecc-Ch---HHhhcc-cC-cCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecC
Q 048393 254 QKGLVVNWC-PQ---LGVLAH-EA-TGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPA 323 (369)
Q Consensus 254 ~~~~~~~~~-p~---~~iL~~-~~-~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~ 323 (369)
+++.+.++. +. .+++.+ ++ .++||.= +-..+++||+++|+|+|+--.. ..+..+++- ..|..++.
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~dg-~tGfLVdp 693 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQDG-VSGFHIDP 693 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcCC-CcEEEeCC
Confidence 566666653 32 245542 22 1226642 2336999999999999985443 355566666 67988874
Q ss_pred CCCCCcCHHHHHHHHHHHh----cCCcH-HHHHHHHH
Q 048393 324 DEKGIVRREAIAHCINEIL----EGERG-KEIKQNAD 355 (369)
Q Consensus 324 ~~~~~~~~~~l~~~i~~~l----~~~~~-~~~~~~a~ 355 (369)
. +.+.+.++|.+++ .|++. ..+.++++
T Consensus 694 ~-----D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~ 725 (784)
T TIGR02470 694 Y-----HGEEAAEKIVDFFEKCDEDPSYWQKISQGGL 725 (784)
T ss_pred C-----CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 4 7889999998876 46532 45555543
No 97
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.64 E-value=0.032 Score=51.79 Aligned_cols=126 Identities=16% Similarity=0.155 Sum_probs=75.2
Q ss_pred CCceEEEEeCcccc----CCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEE-eccChHHhhcccCc
Q 048393 199 NGSVVYVSFGSMAT----LKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVV-NWCPQLGVLAHEAT 273 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~----~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~iL~~~~~ 273 (369)
+++.|++-+-+..+ .....+.++++.|++.+..+|..-+......+-+++ ++.+. .-+.-.++|.++++
T Consensus 178 ~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~~~~~~~~------~~~i~~~~vd~~~Ll~~a~l 251 (335)
T PF04007_consen 178 DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQRELFEKY------GVIIPPEPVDGLDLLYYADL 251 (335)
T ss_pred CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcchhhHHhcc------CccccCCCCCHHHHHHhcCE
Confidence 45677776665432 233456778888888877655443332221111111 12222 34455589999999
Q ss_pred CceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHh
Q 048393 274 GCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEIL 342 (369)
Q Consensus 274 ~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l 342 (369)
+|+-|| .+..||...|+|.|-+ +.++-...-+.+.+. |+ ... .-+.+++.+.+.+.+
T Consensus 252 --~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l~~-----~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 252 --VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--LYH-----STDPDEIVEYVRKNL 308 (335)
T ss_pred --EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--eEe-----cCCHHHHHHHHHHhh
Confidence 999877 7889999999999953 223322333556666 54 433 236777777666554
No 98
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.61 E-value=0.00045 Score=66.28 Aligned_cols=137 Identities=18% Similarity=0.242 Sum_probs=79.6
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcc------cCCCcEEEeccChHH---hh
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDE------TSQKGLVVNWCPQLG---VL 268 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~p~~~---iL 268 (369)
+++.++|.+|.+....+++.+..-.+.|++.+...+|........ ...+... ..+++.+.++.|..+ .+
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~--~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~ 359 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG--EARLRRRFAAHGVDPDRIIFSPVAPREEHLRRY 359 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH--HHHHHHHHHHTTS-GGGEEEEE---HHHHHHHG
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH--HHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHh
Confidence 456699999999999999999999999999999999998654211 1111111 125677777777654 34
Q ss_pred cccCcCcee---ecCChhhHHHHHhhCCceeecCCCC-ChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 269 AHEATGCFL---THCGWNSTMEALGLGVPMLAMPQWS-DQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 269 ~~~~~~~~I---~hgG~~s~~eal~~GvP~i~~P~~~-dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
..+|+ ++ ..+|..|++|||+.|||+|.+|-.. =...-|-.+..+ |+.-.+- -+.++-.+...++-+|
T Consensus 360 ~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~l-Gl~ElIA------~s~~eYv~~Av~La~D 430 (468)
T PF13844_consen 360 QLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRAL-GLPELIA------DSEEEYVEIAVRLATD 430 (468)
T ss_dssp GG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHH-T-GGGB-------SSHHHHHHHHHHHHH-
T ss_pred hhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHc-CCchhcC------CCHHHHHHHHHHHhCC
Confidence 55665 66 4578899999999999999999543 334455666666 8876554 2555544444467677
Q ss_pred C
Q 048393 345 E 345 (369)
Q Consensus 345 ~ 345 (369)
.
T Consensus 431 ~ 431 (468)
T PF13844_consen 431 P 431 (468)
T ss_dssp H
T ss_pred H
Confidence 6
No 99
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.49 E-value=0.0009 Score=62.39 Aligned_cols=142 Identities=15% Similarity=0.122 Sum_probs=80.9
Q ss_pred ceEEEEeCcccc-CCHHHHHHHHHHHHhCC--CcEEEEEeCCc-cCCCCcch--hcccCCCcEEEeccChH---Hhhccc
Q 048393 201 SVVYVSFGSMAT-LKMEQMEELAWGLKASD--KYFLWVVRESE-QSKLPENF--SDETSQKGLVVNWCPQL---GVLAHE 271 (369)
Q Consensus 201 ~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~--~~~i~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~p~~---~iL~~~ 271 (369)
..+++..|+... .....+.+.+..+...+ ..+++. |... ........ .....+++.+.+++|+. ++++.+
T Consensus 195 ~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 273 (365)
T cd03809 195 RPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIV-GKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGA 273 (365)
T ss_pred CCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEe-cCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhh
Confidence 356667787763 23344434444444332 444433 3321 11100000 01234678888999765 578888
Q ss_pred CcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH
Q 048393 272 ATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG 347 (369)
Q Consensus 272 ~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~ 347 (369)
++ +|.- |..+++.||+++|+|+|+-...+ ..+.+. ..|..+.. -+.+++.++|.++++|++.
T Consensus 274 d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~---~~~~~~~~-----~~~~~~~~~i~~l~~~~~~ 339 (365)
T cd03809 274 RA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAG---DAALYFDP-----LDPEALAAAIERLLEDPAL 339 (365)
T ss_pred hh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceec---CceeeeCC-----CCHHHHHHHHHHHhcCHHH
Confidence 88 5432 33468999999999999855422 111222 23555553 3789999999999988743
Q ss_pred -HHHHHHHHHH
Q 048393 348 -KEIKQNADKW 357 (369)
Q Consensus 348 -~~~~~~a~~l 357 (369)
..+.+++++.
T Consensus 340 ~~~~~~~~~~~ 350 (365)
T cd03809 340 REELRERGLAR 350 (365)
T ss_pred HHHHHHHHHHH
Confidence 4455555443
No 100
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.48 E-value=0.00031 Score=56.00 Aligned_cols=126 Identities=18% Similarity=0.235 Sum_probs=66.6
Q ss_pred eEEEEeCcccc-CCHHHHHH-HHHHHHhCCCcEEEE-EeCCccCCCCcchhcccCCCcEEEeccChH-HhhcccCcCcee
Q 048393 202 VVYVSFGSMAT-LKMEQMEE-LAWGLKASDKYFLWV-VRESEQSKLPENFSDETSQKGLVVNWCPQL-GVLAHEATGCFL 277 (369)
Q Consensus 202 ~i~vs~Gs~~~-~~~~~~~~-~~~~l~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~iL~~~~~~~~I 277 (369)
+.++++|+... .....+-+ +++.+.+...++-+. ++.. ++.+.+...+++.+.+|+++. ++++.+++.+..
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~-----~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~l~p 77 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNG-----PDELKRLRRPNVRFHGFVEELPEILAAADVGLIP 77 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECES-----S-HHCCHHHCTEEEE-S-HHHHHHHHC-SEEEE-
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCC-----HHHHHHhcCCCEEEcCCHHHHHHHHHhCCEEEEE
Confidence 45566666652 33443333 555554322223333 3332 112221124588999998755 789999996665
Q ss_pred ec---CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 278 TH---CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 278 ~h---gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
+. +-.+++.|++.+|+|+|+.+.. ....++.. +.|..+ .+ +.+++.++|.++++|
T Consensus 78 ~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~~-~~~~~~-~~-----~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 78 SRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEED-GCGVLV-AN-----DPEELAEAIERLLND 135 (135)
T ss_dssp BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE--TT------HHHHHHHHHHHHH-
T ss_pred eeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheeec-CCeEEE-CC-----CHHHHHHHHHHHhcC
Confidence 43 2248999999999999997651 22233335 778777 33 899999999999875
No 101
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.45 E-value=0.025 Score=54.10 Aligned_cols=130 Identities=12% Similarity=0.122 Sum_probs=74.3
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCcc-CCCCcchhcc--cCCCcEEEeccChH---Hhhcc
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLKA--SDKYFLWVVRESEQ-SKLPENFSDE--TSQKGLVVNWCPQL---GVLAH 270 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~p~~---~iL~~ 270 (369)
+..+++..|.... .....+-+.+..+.+ .+..+++ +|.... ..+. ...++ ..+++.+.+|+|+. .+++.
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~~~~~l~-~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFII-GGDGPKRILLE-EMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEE-EeCCchHHHHH-HHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 4467777787753 223333333333332 3344443 343321 1111 11111 23567888998754 58889
Q ss_pred cCcCceeec---CCh-hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 271 EATGCFLTH---CGW-NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 271 ~~~~~~I~h---gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+|+ +|.- -|. .++.||+++|+|+|+-+..+ ..+.+. . |.+.... . +.+++.+++.+++++.
T Consensus 270 ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~-~-~~~~~~~-----~-~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 270 GHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLP-P-DMILLAE-----P-DVESIVRKLEEAISIL 334 (398)
T ss_pred CCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhee-C-CceeecC-----C-CHHHHHHHHHHHHhCh
Confidence 998 6542 233 49999999999999976643 223333 3 4343332 2 7899999999998764
No 102
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.43 E-value=0.0018 Score=60.46 Aligned_cols=131 Identities=18% Similarity=0.184 Sum_probs=76.0
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCccCCCCcchhc-ccCCCcEEEeccChH-HhhcccCcC
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLKA--SDKYFLWVVRESEQSKLPENFSD-ETSQKGLVVNWCPQL-GVLAHEATG 274 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~-~iL~~~~~~ 274 (369)
+..+++..|+... .....+-+.+..+.+ .+..+++.-.+.....+...... ...+++.+.++..+. ++|+.+++
T Consensus 187 ~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~- 265 (360)
T cd04951 187 DTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADL- 265 (360)
T ss_pred CCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhce-
Confidence 3467777787653 222332222223322 24666655322211111111111 123567788877654 78999998
Q ss_pred ceeecCC----hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 275 CFLTHCG----WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 275 ~~I~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
+|.-.. .+++.||+++|+|+|+.. ...+...+++. |..+.. -+.+++.+++.+++++
T Consensus 266 -~v~~s~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i~~~---g~~~~~-----~~~~~~~~~i~~ll~~ 326 (360)
T cd04951 266 -FVLSSAWEGFGLVVAEAMACELPVVATD----AGGVREVVGDS---GLIVPI-----SDPEALANKIDEILKM 326 (360)
T ss_pred -EEecccccCCChHHHHHHHcCCCEEEec----CCChhhEecCC---ceEeCC-----CCHHHHHHHHHHHHhC
Confidence 655332 578999999999999743 34455555543 455553 3788999999999844
No 103
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.41 E-value=0.002 Score=61.19 Aligned_cols=148 Identities=16% Similarity=0.161 Sum_probs=84.8
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhC--CCcEEEEEeCCccCCCCcchhc---cc---CCCcEE-EeccChH---Hhh
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKAS--DKYFLWVVRESEQSKLPENFSD---ET---SQKGLV-VNWCPQL---GVL 268 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~---~~---~~~~~~-~~~~p~~---~iL 268 (369)
..+++..|..... .-+..+++++... +..+++..+......+.+.+.+ .. ..++.. .+++++. .++
T Consensus 201 ~~~i~~~Grl~~~--Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 278 (388)
T TIGR02149 201 RPYILFVGRITRQ--KGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELL 278 (388)
T ss_pred ceEEEEEcccccc--cCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHH
Confidence 3566667776531 2244555555543 4555544333221111111111 11 123443 3567654 678
Q ss_pred cccCcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCC-CCcCHHHHHHHHHHHhc
Q 048393 269 AHEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEK-GIVRREAIAHCINEILE 343 (369)
Q Consensus 269 ~~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~-~~~~~~~l~~~i~~~l~ 343 (369)
+++|+ +|.= +...++.||+++|+|+|+.... ...+.+++. +.|..++..+. ..-..+.+.++|.++++
T Consensus 279 ~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~-~~G~~~~~~~~~~~~~~~~l~~~i~~l~~ 351 (388)
T TIGR02149 279 SNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDG-ETGFLVPPDNSDADGFQAELAKAINILLA 351 (388)
T ss_pred HhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCC-CceEEcCCCCCcccchHHHHHHHHHHHHh
Confidence 99998 7642 3346789999999999986543 355666666 77988875410 00112889999999998
Q ss_pred CCcH-HHHHHHHHHH
Q 048393 344 GERG-KEIKQNADKW 357 (369)
Q Consensus 344 ~~~~-~~~~~~a~~l 357 (369)
|++. +.+.+++++.
T Consensus 352 ~~~~~~~~~~~a~~~ 366 (388)
T TIGR02149 352 DPELAKKMGIAGRKR 366 (388)
T ss_pred CHHHHHHHHHHHHHH
Confidence 8743 5566665543
No 104
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.39 E-value=0.13 Score=49.55 Aligned_cols=96 Identities=18% Similarity=0.051 Sum_probs=61.3
Q ss_pred CCCcEEEeccChH---HhhcccCcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHH---hhcCceEEec
Q 048393 253 SQKGLVVNWCPQL---GVLAHEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIM---DVGKMGLKVP 322 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~---~~~g~g~~~~ 322 (369)
.+++.+.+++|+. .+|+.+++ +|+- +=..++.||+++|+|+|+.-..+.- ...++ .- ..|....
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~g-~~G~l~~ 377 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPL---LDIVVPWDGG-PTGFLAS 377 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCCc---hheeeccCCC-CceEEeC
Confidence 4678888888865 58889988 6642 1124889999999999986543211 11122 23 4676642
Q ss_pred CCCCCCcCHHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHH
Q 048393 323 ADEKGIVRREAIAHCINEILEGERG--KEIKQNADKWRNFA 361 (369)
Q Consensus 323 ~~~~~~~~~~~l~~~i~~~l~~~~~--~~~~~~a~~l~~~~ 361 (369)
+.+++.++|.+++++++. ..++++.++..+.+
T Consensus 378 -------d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~f 411 (419)
T cd03806 378 -------TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRF 411 (419)
T ss_pred -------CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 789999999999987532 23444444443333
No 105
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.33 E-value=0.073 Score=50.35 Aligned_cols=128 Identities=17% Similarity=0.236 Sum_probs=77.6
Q ss_pred CCceEEEEeCccc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCcc-C-CCCcchhccc--CCCcEEEeccC---hHHhh
Q 048393 199 NGSVVYVSFGSMA---TLKMEQMEELAWGLKASDKYFLWVVRESEQ-S-KLPENFSDET--SQKGLVVNWCP---QLGVL 268 (369)
Q Consensus 199 ~~~~i~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~-~~~~~~~~~~--~~~~~~~~~~p---~~~iL 268 (369)
+++.++|.+=... ....+.+..+++++.+.+.++++....... . .+.+.+.... .+++.+.+-++ ...++
T Consensus 200 ~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll 279 (365)
T TIGR03568 200 DKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLL 279 (365)
T ss_pred CCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHH
Confidence 3457777775432 234567889999998776555655433211 0 0111111111 35677776544 44788
Q ss_pred cccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEE-ecCCCCCCcCHHHHHHHHHHHhc
Q 048393 269 AHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLK-VPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~-~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
.++++ +||-.+.+. .||.+.|+|.|.+- +.+. ..+. |..+. +. .++++|.+++.++++
T Consensus 280 ~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~e----~~~~-g~nvl~vg------~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 280 KNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQK----GRLR-ADSVIDVD------PDKEEIVKAIEKLLD 338 (365)
T ss_pred HhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCch----hhhh-cCeEEEeC------CCHHHHHHHHHHHhC
Confidence 99999 999886555 99999999999774 2221 1123 33322 32 478999999998543
No 106
>PLN00142 sucrose synthase
Probab=97.24 E-value=0.25 Score=51.14 Aligned_cols=74 Identities=20% Similarity=0.260 Sum_probs=49.0
Q ss_pred cCcCceeec---CCh-hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHH----h
Q 048393 271 EATGCFLTH---CGW-NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEI----L 342 (369)
Q Consensus 271 ~~~~~~I~h---gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~----l 342 (369)
+++ ||.- =|. .++.||+++|+|+|+-... .....+++- ..|..++.. +.+++.++|.++ +
T Consensus 667 aDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdvG----G~~EIV~dG-~tG~LV~P~-----D~eaLA~aI~~lLekLl 734 (815)
T PLN00142 667 KGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQG----GPAEIIVDG-VSGFHIDPY-----HGDEAANKIADFFEKCK 734 (815)
T ss_pred CCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcCC-CcEEEeCCC-----CHHHHHHHHHHHHHHhc
Confidence 455 6643 333 4899999999999986543 345566655 679888854 778888887654 4
Q ss_pred cCCcH-HHHHHHHHH
Q 048393 343 EGERG-KEIKQNADK 356 (369)
Q Consensus 343 ~~~~~-~~~~~~a~~ 356 (369)
.|++. ..+.+++++
T Consensus 735 ~Dp~lr~~mg~~Ar~ 749 (815)
T PLN00142 735 EDPSYWNKISDAGLQ 749 (815)
T ss_pred CCHHHHHHHHHHHHH
Confidence 67633 455555543
No 107
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.94 E-value=0.0058 Score=56.44 Aligned_cols=129 Identities=11% Similarity=0.033 Sum_probs=78.4
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCcc-CCCCcchhcc--cCCCcEEEeccChH---HhhcccCcCc
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQ-SKLPENFSDE--TSQKGLVVNWCPQL---GVLAHEATGC 275 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~p~~---~iL~~~~~~~ 275 (369)
.+.+..|.... ......++++++..+.++++. |.... ..+....... ..+++.+.+++++. .+++.+++-+
T Consensus 172 ~~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v 248 (335)
T cd03802 172 DYLLFLGRISP--EKGPHLAIRAARRAGIPLKLA-GPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALL 248 (335)
T ss_pred CEEEEEEeecc--ccCHHHHHHHHHhcCCeEEEE-eCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEE
Confidence 44555677642 223455667777777776654 43321 1111111111 24778899999875 4688888833
Q ss_pred eeec--CC-hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 276 FLTH--CG-WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 276 ~I~h--gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+-+. -| ..++.||+++|+|+|+....+ ....+.+. ..|..++ . .+++.+++.++++..
T Consensus 249 ~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~~-~~g~l~~-----~--~~~l~~~l~~l~~~~ 309 (335)
T cd03802 249 FPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVEDG-VTGFLVD-----S--VEELAAAVARADRLD 309 (335)
T ss_pred eCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeCC-CcEEEeC-----C--HHHHHHHHHHHhccH
Confidence 3232 33 358999999999999876532 23344433 4677765 3 889999999886543
No 108
>PLN02949 transferase, transferring glycosyl groups
Probab=96.87 E-value=0.51 Score=46.13 Aligned_cols=93 Identities=20% Similarity=0.103 Sum_probs=58.6
Q ss_pred CCCcEEEeccChH---HhhcccCcCceee---cCCh-hhHHHHHhhCCceeecCCCC---ChhHHHHHHHhhcCceEEec
Q 048393 253 SQKGLVVNWCPQL---GVLAHEATGCFLT---HCGW-NSTMEALGLGVPMLAMPQWS---DQSTNAKYIMDVGKMGLKVP 322 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~~~~~~I~---hgG~-~s~~eal~~GvP~i~~P~~~---dQ~~na~~~~~~~g~g~~~~ 322 (369)
.+++.+.+++|+. ++|+.+++ +|+ +=|. .++.||+++|+|+|+....+ |.-.+. .....|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~----~~g~tG~l~- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE----DGQQTGFLA- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC----CCCcccccC-
Confidence 4678888998755 57888887 663 1233 48999999999999976533 111110 000123332
Q ss_pred CCCCCCcCHHHHHHHHHHHhcC-Cc-HHHHHHHHHHHH
Q 048393 323 ADEKGIVRREAIAHCINEILEG-ER-GKEIKQNADKWR 358 (369)
Q Consensus 323 ~~~~~~~~~~~l~~~i~~~l~~-~~-~~~~~~~a~~l~ 358 (369)
. +.+++.++|.+++++ ++ ...+.+++++..
T Consensus 407 -----~-~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~ 438 (463)
T PLN02949 407 -----T-TVEEYADAILEVLRMRETERLEIAAAARKRA 438 (463)
T ss_pred -----C-CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 1 688999999999985 32 245666655443
No 109
>PHA01633 putative glycosyl transferase group 1
Probab=96.82 E-value=0.047 Score=50.75 Aligned_cols=101 Identities=14% Similarity=0.068 Sum_probs=63.7
Q ss_pred CCCcEEE---eccChH---HhhcccCcCceeec---CC-hhhHHHHHhhCCceeecCC------CCCh------hHHHHH
Q 048393 253 SQKGLVV---NWCPQL---GVLAHEATGCFLTH---CG-WNSTMEALGLGVPMLAMPQ------WSDQ------STNAKY 310 (369)
Q Consensus 253 ~~~~~~~---~~~p~~---~iL~~~~~~~~I~h---gG-~~s~~eal~~GvP~i~~P~------~~dQ------~~na~~ 310 (369)
.+++.+. +++++. ++++.+++ ||.- =| ..+++||+++|+|+|+--. .+++ ..++..
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 3567776 444543 67889998 8753 23 4689999999999998522 2332 233333
Q ss_pred HH--hhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 048393 311 IM--DVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFA 361 (369)
Q Consensus 311 ~~--~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~ 361 (369)
.. +. |.|..++ ..+++++.++|.+++...+.+....++++.++.+
T Consensus 278 ~~~~~~-g~g~~~~-----~~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~f 324 (335)
T PHA01633 278 YYDKEH-GQKWKIH-----KFQIEDMANAIILAFELQDREERSMKLKELAKKY 324 (335)
T ss_pred hcCccc-Cceeeec-----CCCHHHHHHHHHHHHhccChhhhhHHHHHHHHhc
Confidence 33 24 6676766 4699999999999965443323344555555544
No 110
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.80 E-value=0.0074 Score=56.33 Aligned_cols=97 Identities=19% Similarity=0.268 Sum_probs=69.7
Q ss_pred CCCcEEEeccChHHh---hcccCcCceeecC-------C------hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcC
Q 048393 253 SQKGLVVNWCPQLGV---LAHEATGCFLTHC-------G------WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGK 316 (369)
Q Consensus 253 ~~~~~~~~~~p~~~i---L~~~~~~~~I~hg-------G------~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g 316 (369)
.+|+.+.+|+|+.++ |+. +.+++...- . .+-+.+.+++|+|+|+.+ ....+..+++. +
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~-~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVEN-G 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhC-C
Confidence 357889999998754 444 433332211 1 123778899999999964 46678899999 9
Q ss_pred ceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 048393 317 MGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKE 363 (369)
Q Consensus 317 ~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 363 (369)
+|+.++ +.+++.+++.++ .+++...|++|++++++++++
T Consensus 280 ~G~~v~-------~~~el~~~l~~~-~~~~~~~m~~n~~~~~~~~~~ 318 (333)
T PRK09814 280 LGFVVD-------SLEELPEIIDNI-TEEEYQEMVENVKKISKLLRN 318 (333)
T ss_pred ceEEeC-------CHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhc
Confidence 999986 456888888875 334446799999999988874
No 111
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.73 E-value=0.51 Score=44.12 Aligned_cols=129 Identities=17% Similarity=0.265 Sum_probs=82.0
Q ss_pred CCceEEEEeCccccCCHHHHHHHHH----HHHhC-CCcEEEEEeCCccCCCCcchh-ccc--CCCcEEE---eccChHHh
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAW----GLKAS-DKYFLWVVRESEQSKLPENFS-DET--SQKGLVV---NWCPQLGV 267 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~----~l~~~-~~~~i~~~~~~~~~~~~~~~~-~~~--~~~~~~~---~~~p~~~i 267 (369)
.+..+++++=...... +.++.+.+ .++.. +..++..+.... .+. .+. .+. .+++++. +|.+...+
T Consensus 203 ~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~~--~v~-e~~~~~L~~~~~v~li~pl~~~~f~~L 278 (383)
T COG0381 203 DKKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPRP--RVR-ELVLKRLKNVERVKLIDPLGYLDFHNL 278 (383)
T ss_pred cCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCCh--hhh-HHHHHHhCCCCcEEEeCCcchHHHHHH
Confidence 3448888765554433 33444444 44444 556665554431 111 111 122 2356664 46777789
Q ss_pred hcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 268 LAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 268 L~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+.++.+ ++|-.| |-.-||-..|+|++++=...+|+.- + -+|..+-. ..+.+.+.+++.++++++
T Consensus 279 ~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE~---v----~agt~~lv----g~~~~~i~~~~~~ll~~~ 342 (383)
T COG0381 279 MKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPEG---V----EAGTNILV----GTDEENILDAATELLEDE 342 (383)
T ss_pred HHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCccc---e----ecCceEEe----CccHHHHHHHHHHHhhCh
Confidence 999988 999887 4567899999999999999999872 2 23333332 357899999999999987
No 112
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.67 E-value=0.015 Score=54.31 Aligned_cols=136 Identities=16% Similarity=0.216 Sum_probs=75.7
Q ss_pred EEEEeCccccCCHHHHHHHHHHHHhC--CCcEEEEEeCC-ccCCCCcchh--cccCCCcEEEeccChH---HhhcccCcC
Q 048393 203 VYVSFGSMATLKMEQMEELAWGLKAS--DKYFLWVVRES-EQSKLPENFS--DETSQKGLVVNWCPQL---GVLAHEATG 274 (369)
Q Consensus 203 i~vs~Gs~~~~~~~~~~~~~~~l~~~--~~~~i~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~p~~---~iL~~~~~~ 274 (369)
.++..|+.... .-+..+++++... +.+++ .+|.. ....+...+. ....+++.+.+++|+. +++..+++
T Consensus 195 ~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~l~-ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~- 270 (363)
T cd04955 195 YYLLVGRIVPE--NNIDDLIEAFSKSNSGKKLV-IVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAAL- 270 (363)
T ss_pred EEEEEeccccc--CCHHHHHHHHHhhccCceEE-EEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCE-
Confidence 34567877532 2244455555543 34544 34443 1111111111 1234678889999876 46777777
Q ss_pred ceeecCCh-----hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-H
Q 048393 275 CFLTHCGW-----NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-K 348 (369)
Q Consensus 275 ~~I~hgG~-----~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~ 348 (369)
++.+.-. +++.||+++|+|+|+....+. .+.++. .|..+... +. +.++|.+++++++. .
T Consensus 271 -~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~---~g~~~~~~-----~~--l~~~i~~l~~~~~~~~ 335 (363)
T cd04955 271 -FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGD---KAIYFKVG-----DD--LASLLEELEADPEEVS 335 (363)
T ss_pred -EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecC---CeeEecCc-----hH--HHHHHHHHHhCHHHHH
Confidence 6554433 579999999999998654321 122222 24444322 22 99999999988632 4
Q ss_pred HHHHHHHHH
Q 048393 349 EIKQNADKW 357 (369)
Q Consensus 349 ~~~~~a~~l 357 (369)
.+.+++++.
T Consensus 336 ~~~~~~~~~ 344 (363)
T cd04955 336 AMAKAARER 344 (363)
T ss_pred HHHHHHHHH
Confidence 455555443
No 113
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.59 E-value=0.061 Score=50.84 Aligned_cols=90 Identities=22% Similarity=0.132 Sum_probs=59.7
Q ss_pred CCcEEEecc--ChH---HhhcccCcCceeecC----ChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCC
Q 048393 254 QKGLVVNWC--PQL---GVLAHEATGCFLTHC----GWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPAD 324 (369)
Q Consensus 254 ~~~~~~~~~--p~~---~iL~~~~~~~~I~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~ 324 (369)
+++.+.++. ++. .+++.+++ |+.-. -..++.||+++|+|+|+....+ ....+..- ..|+.++
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~-~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDG-ETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccC-CceEEeC--
Confidence 467777765 332 57888888 87543 2459999999999999876432 23345444 5677654
Q ss_pred CCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHH
Q 048393 325 EKGIVRREAIAHCINEILEGERG-KEIKQNADKW 357 (369)
Q Consensus 325 ~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l 357 (369)
+.+.+..+|.+++++++- ..+.+++++.
T Consensus 323 -----~~~~~a~~i~~ll~~~~~~~~~~~~a~~~ 351 (372)
T cd03792 323 -----TVEEAAVRILYLLRDPELRRKMGANAREH 351 (372)
T ss_pred -----CcHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 345677799999988632 4555555553
No 114
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.55 E-value=0.091 Score=49.79 Aligned_cols=125 Identities=20% Similarity=0.148 Sum_probs=71.3
Q ss_pred eEEEEeCcccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH---HhhcccCcCcee
Q 048393 202 VVYVSFGSMAT-LKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL---GVLAHEATGCFL 277 (369)
Q Consensus 202 ~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~~~~~I 277 (369)
.+++..|++.. ...+.+.+++.. ..+..+++. |..+.. .... .....+|+.+.+++|.. .+|+++|+.++-
T Consensus 206 ~~i~y~G~l~~~~d~~ll~~la~~--~p~~~~vli-G~~~~~-~~~~-~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P 280 (373)
T cd04950 206 PVIGYYGAIAEWLDLELLEALAKA--RPDWSFVLI-GPVDVS-IDPS-ALLRLPNVHYLGPKPYKELPAYLAGFDVAILP 280 (373)
T ss_pred CEEEEEeccccccCHHHHHHHHHH--CCCCEEEEE-CCCcCc-cChh-HhccCCCEEEeCCCCHHHHHHHHHhCCEEecC
Confidence 56667788874 232333333321 235555544 432111 0000 01113689999999855 578899983332
Q ss_pred ------ecCC-hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 278 ------THCG-WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 278 ------~hgG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+.++ .+.+.|++++|+|+|..++ ...++.. + |..+.. -+.+++.++|.+++.++
T Consensus 281 ~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~~-~-~~~~~~-----~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 281 FRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRYE-D-EVVLIA-----DDPEEFVAAIEKALLED 341 (373)
T ss_pred CccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhhc-C-cEEEeC-----CCHHHHHHHHHHHHhcC
Confidence 2223 2469999999999998763 1223333 4 333332 27899999999976543
No 115
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.48 E-value=0.032 Score=54.12 Aligned_cols=132 Identities=17% Similarity=0.210 Sum_probs=88.5
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchh---cc---cCCCcEEEeccChH---Hhh
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFS---DE---TSQKGLVVNWCPQL---GVL 268 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~p~~---~iL 268 (369)
+++.+||+|++......++.+..=++.|+..+-.++|..+.+........+. ++ .++++.+.+-.|.. +-+
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~ 506 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARY 506 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhh
Confidence 4567999999999999999999888889999999999988753222222221 11 12456666655533 556
Q ss_pred cccCcCceee---cCChhhHHHHHhhCCceeecCCCCChhH--HHHHHHhhcCceEEecCCCCCCcCHHHHHHHH
Q 048393 269 AHEATGCFLT---HCGWNSTMEALGLGVPMLAMPQWSDQST--NAKYIMDVGKMGLKVPADEKGIVRREAIAHCI 338 (369)
Q Consensus 269 ~~~~~~~~I~---hgG~~s~~eal~~GvP~i~~P~~~dQ~~--na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i 338 (369)
.-+|+ |+. -||+-|..|+|..|||+|.++ ++|+. |+..+....|+--.+-.+ ..+-++++|
T Consensus 507 ~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA~s-----~~dYV~~av 572 (620)
T COG3914 507 GIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVADS-----RADYVEKAV 572 (620)
T ss_pred chhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhcCC-----HHHHHHHHH
Confidence 67777 875 699999999999999999886 77765 443333332544333321 334466665
No 116
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.47 E-value=0.56 Score=47.54 Aligned_cols=75 Identities=17% Similarity=0.097 Sum_probs=52.1
Q ss_pred cEEEeccChH-HhhcccCcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcC
Q 048393 256 GLVVNWCPQL-GVLAHEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVR 330 (369)
Q Consensus 256 ~~~~~~~p~~-~iL~~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~ 330 (369)
+.+.++.++. ++++.+|+ ||.= |=.++++||+++|+|+|+.-..+... +... +.|. +. . +
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g-~nGl-l~-~-----D 667 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSF-PNCL-TY-K-----T 667 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eeec-CCeE-ec-C-----C
Confidence 4556666655 58999998 7752 22368999999999999977655322 2222 3333 22 2 6
Q ss_pred HHHHHHHHHHHhcCC
Q 048393 331 REAIAHCINEILEGE 345 (369)
Q Consensus 331 ~~~l~~~i~~~l~~~ 345 (369)
.+++.++|.+++.++
T Consensus 668 ~EafAeAI~~LLsd~ 682 (794)
T PLN02501 668 SEDFVAKVKEALANE 682 (794)
T ss_pred HHHHHHHHHHHHhCc
Confidence 899999999999887
No 117
>PLN02275 transferase, transferring glycosyl groups
Probab=96.41 E-value=0.033 Score=52.79 Aligned_cols=75 Identities=20% Similarity=0.269 Sum_probs=54.0
Q ss_pred CCcEEEe-ccChH---HhhcccCcCceee-c---CC---hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEec
Q 048393 254 QKGLVVN-WCPQL---GVLAHEATGCFLT-H---CG---WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVP 322 (369)
Q Consensus 254 ~~~~~~~-~~p~~---~iL~~~~~~~~I~-h---gG---~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~ 322 (369)
+|+.+.. |+|.. .+|+.+|+ +|. + -| .+++.||+++|+|+|+.... .+.+.+++- +.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~g-~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKDG-KNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccCC-CCeEEEC
Confidence 4455544 78865 45999999 763 1 12 35899999999999996532 266677777 7898875
Q ss_pred CCCCCCcCHHHHHHHHHHHh
Q 048393 323 ADEKGIVRREAIAHCINEIL 342 (369)
Q Consensus 323 ~~~~~~~~~~~l~~~i~~~l 342 (369)
+.+++.++|.+++
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 4788999888764
No 118
>PLN02846 digalactosyldiacylglycerol synthase
Probab=96.37 E-value=0.79 Score=44.63 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=51.3
Q ss_pred EEeccChHHhhcccCcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHH
Q 048393 258 VVNWCPQLGVLAHEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREA 333 (369)
Q Consensus 258 ~~~~~p~~~iL~~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~ 333 (369)
+.++.+..++++..|+ ||.= +=.++++||+++|+|+|+.-..+. ..+.+. +.|...+ +.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~~-----~~v~~~-~ng~~~~-------~~~~ 352 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPSN-----EFFKQF-PNCRTYD-------DGKG 352 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCCc-----ceeecC-CceEecC-------CHHH
Confidence 3455555679999988 8866 334799999999999999764432 333334 5554442 5778
Q ss_pred HHHHHHHHhcCC
Q 048393 334 IAHCINEILEGE 345 (369)
Q Consensus 334 l~~~i~~~l~~~ 345 (369)
+.+++.+++.++
T Consensus 353 ~a~ai~~~l~~~ 364 (462)
T PLN02846 353 FVRATLKALAEE 364 (462)
T ss_pred HHHHHHHHHccC
Confidence 999999998754
No 119
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.10 E-value=0.11 Score=50.05 Aligned_cols=163 Identities=10% Similarity=0.115 Sum_probs=94.2
Q ss_pred HHHHhccCCCCceEEEEeCccccC------C-H---HHHHHHHHHHHhCCCcEEEEEeCCccCC-CC------cchhccc
Q 048393 190 CMKWLNDRANGSVVYVSFGSMATL------K-M---EQMEELAWGLKASDKYFLWVVRESEQSK-LP------ENFSDET 252 (369)
Q Consensus 190 ~~~~l~~~~~~~~i~vs~Gs~~~~------~-~---~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~------~~~~~~~ 252 (369)
+..|+....++++|-|+...-... . . ..+.++++.|.+.++++++.-....... .+ ..+.+..
T Consensus 224 ~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~ 303 (426)
T PRK10017 224 VQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHV 303 (426)
T ss_pred hhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhc
Confidence 345554434456787776644311 1 1 2244555656566888886643211000 01 1111222
Q ss_pred C--CCcEEE--eccChH--HhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEE-ecCCC
Q 048393 253 S--QKGLVV--NWCPQL--GVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLK-VPADE 325 (369)
Q Consensus 253 ~--~~~~~~--~~~p~~--~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~-~~~~~ 325 (369)
. .+..+. .+-+.. .+++++++ +|..= .-++.=|+..|||.+++++. +.....++.. |..-. ++..
T Consensus 304 ~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y~---~K~~~~~~~l-g~~~~~~~~~- 375 (426)
T PRK10017 304 SDPARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINYE---HKSAGIMQQL-GLPEMAIDIR- 375 (426)
T ss_pred ccccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeeeh---HHHHHHHHHc-CCccEEechh-
Confidence 2 233332 233433 78899988 88653 44677788999999999983 4444455666 87755 5555
Q ss_pred CCCcCHHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHH
Q 048393 326 KGIVRREAIAHCINEILEGERG--KEIKQNADKWRNFAK 362 (369)
Q Consensus 326 ~~~~~~~~l~~~i~~~l~~~~~--~~~~~~a~~l~~~~~ 362 (369)
.++.++|.+.+.++++|.+. +.+++++.++.++..
T Consensus 376 --~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~~~ 412 (426)
T PRK10017 376 --HLLDGSLQAMVADTLGQLPALNARLAEAVSRERQTGM 412 (426)
T ss_pred --hCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999988542 344555555554443
No 120
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.79 E-value=0.12 Score=51.05 Aligned_cols=65 Identities=22% Similarity=0.252 Sum_probs=48.7
Q ss_pred CCCcEEEeccChH-HhhcccCcCceeec---CC-hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCC
Q 048393 253 SQKGLVVNWCPQL-GVLAHEATGCFLTH---CG-WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPAD 324 (369)
Q Consensus 253 ~~~~~~~~~~p~~-~iL~~~~~~~~I~h---gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~ 324 (369)
.+++.+.+|..+. .+|+.+++ ||.. -| .+++.||+++|+|+|+.... .+...+.+- ..|..++..
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG-~nG~LVp~~ 523 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEG-VSGFILDDA 523 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccC-CcEEEECCC
Confidence 4678888886655 78999999 8753 34 57999999999999976543 345666666 779888754
No 121
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=95.77 E-value=0.075 Score=52.12 Aligned_cols=122 Identities=21% Similarity=0.314 Sum_probs=80.3
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhc------ccCCCcEEEeccChH-----H
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSD------ETSQKGLVVNWCPQL-----G 266 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~~-----~ 266 (369)
+++.+||.+|--....+++.++.-.+.|++.+..++|..+.....+ .++.. -.++++.+.+-.+-. -
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge--~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~ 833 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRG 833 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch--HHHHHHHHHhCCCccceeeccccchHHHHHhh
Confidence 4456999999988889999999999999999999999988652211 12211 112444444322211 2
Q ss_pred hhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHH-HHHhhcCceEEecC
Q 048393 267 VLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAK-YIMDVGKMGLKVPA 323 (369)
Q Consensus 267 iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~-~~~~~~g~g~~~~~ 323 (369)
.|+.-.++-+.+. |+-|.++.++.|||||.+|...--...|. .+... |+|-.+-+
T Consensus 834 ~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~-Gl~hliak 889 (966)
T KOG4626|consen 834 QLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTAL-GLGHLIAK 889 (966)
T ss_pred hhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHc-ccHHHHhh
Confidence 3333333335554 68899999999999999998765444443 44455 98876553
No 122
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.74 E-value=0.07 Score=52.32 Aligned_cols=134 Identities=11% Similarity=0.056 Sum_probs=74.1
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcch---hcccCCCcEEEeccChH---HhhcccC
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENF---SDETSQKGLVVNWCPQL---GVLAHEA 272 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~---~iL~~~~ 272 (369)
+..+++..|.... .....+.+.+..+.+.+.++++. |.... .+.+.+ ..+..+++.+....++. .+++.++
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 372 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVIL-GSGDP-EYEEALRELAARYPGRVAVLIGYDEALAHLIYAGAD 372 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEE-ecCCH-HHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCC
Confidence 3466777787763 23333334444444445555544 43311 111111 12224566654333333 4788888
Q ss_pred cCceeec----CChhhHHHHHhhCCceeecCCCC--ChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhc
Q 048393 273 TGCFLTH----CGWNSTMEALGLGVPMLAMPQWS--DQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 273 ~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
+ ++.- +-..+.+||+++|+|+|+....+ |...+.....+. |.|..++.. +.+++.+++.++++
T Consensus 373 v--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~~~-----~~~~l~~~i~~~l~ 441 (476)
T cd03791 373 F--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFEGY-----NADALLAALRRALA 441 (476)
T ss_pred E--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeCCC-----CHHHHHHHHHHHHH
Confidence 8 7643 22257899999999999765432 221111111134 589888844 78999999999875
No 123
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.64 E-value=0.065 Score=52.58 Aligned_cols=134 Identities=9% Similarity=0.042 Sum_probs=74.8
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcc---hhcccCCCcEEEeccChH---HhhcccC
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLKASDKYFLWVVRESEQSKLPEN---FSDETSQKGLVVNWCPQL---GVLAHEA 272 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~---~iL~~~~ 272 (369)
+..+++..|.... .....+.+.+..+.+.+.++++. |... ..+.+. ...+.+.++.+....+.. .+++.+|
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~-~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 367 (473)
T TIGR02095 290 DVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGD-PELEEALRELAERYPGNVRVIIGYDEALAHLIYAGAD 367 (473)
T ss_pred CCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCC-HHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCC
Confidence 3456666777763 23333333334444445666544 4331 111111 122234556555544543 5788899
Q ss_pred cCceeec---CCh-hhHHHHHhhCCceeecCCCC--ChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhc
Q 048393 273 TGCFLTH---CGW-NSTMEALGLGVPMLAMPQWS--DQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 273 ~~~~I~h---gG~-~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
+ +|.= -|. .+.+||+++|+|+|+-...+ |...+...-... +.|+.+.. -+.+++.++|.+++.
T Consensus 368 v--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~-~~G~l~~~-----~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 368 F--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAES-GTGFLFEE-----YDPGALLAALSRALR 436 (473)
T ss_pred E--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCC-CceEEeCC-----CCHHHHHHHHHHHHH
Confidence 8 7742 133 48899999999999865432 222111000123 56888774 488999999999886
No 124
>PRK14098 glycogen synthase; Provisional
Probab=95.49 E-value=0.19 Score=49.51 Aligned_cols=130 Identities=15% Similarity=0.077 Sum_probs=75.2
Q ss_pred ceEEEEeCcccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCcc---CCCCcchhcccCCCcEEEeccChH---HhhcccCc
Q 048393 201 SVVYVSFGSMAT-LKMEQMEELAWGLKASDKYFLWVVRESEQ---SKLPENFSDETSQKGLVVNWCPQL---GVLAHEAT 273 (369)
Q Consensus 201 ~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~~ 273 (369)
..+++..|.... .....+.+.+..+.+.+..++.. |.+.. ..+ .....+.++++.+..+++.. .+++.+|+
T Consensus 307 ~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lviv-G~G~~~~~~~l-~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi 384 (489)
T PRK14098 307 TPLVGVIINFDDFQGAELLAESLEKLVELDIQLVIC-GSGDKEYEKRF-QDFAEEHPEQVSVQTEFTDAFFHLAIAGLDM 384 (489)
T ss_pred CCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEE-eCCCHHHHHHH-HHHHHHCCCCEEEEEecCHHHHHHHHHhCCE
Confidence 356666677653 23333333333343445555543 54321 111 11222335678888877764 68899998
Q ss_pred CceeecC---C-hhhHHHHHhhCCceeecCCCC--ChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHh
Q 048393 274 GCFLTHC---G-WNSTMEALGLGVPMLAMPQWS--DQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEIL 342 (369)
Q Consensus 274 ~~~I~hg---G-~~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l 342 (369)
|+.-. | ..+.+||+++|+|.|+....+ |...+ ..++. +.|..++. .+++.+.++|.+++
T Consensus 385 --~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~~~-----~d~~~la~ai~~~l 449 (489)
T PRK14098 385 --LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIFHD-----YTPEALVAKLGEAL 449 (489)
T ss_pred --EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEeCC-----CCHHHHHHHHHHHH
Confidence 77533 2 147889999999888765432 22111 11124 67888774 47899999998865
No 125
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.27 E-value=0.14 Score=50.71 Aligned_cols=92 Identities=10% Similarity=0.149 Sum_probs=68.3
Q ss_pred CCcEEEeccC--hH-HhhcccCcCceeecC---ChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCC
Q 048393 254 QKGLVVNWCP--QL-GVLAHEATGCFLTHC---GWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKG 327 (369)
Q Consensus 254 ~~~~~~~~~p--~~-~iL~~~~~~~~I~hg---G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~ 327 (369)
..+.+.++.+ +. .++.++.+ +|.=+ |.++.+||+.+|+|+| .+.....|+.. .-|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~-~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHN-KNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcC-CCcEEeC-----
Confidence 4567778877 44 78888888 77654 7789999999999999 33344555555 6677773
Q ss_pred CcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHH
Q 048393 328 IVRREAIAHCINEILEGERG-KEIKQNADKWRNFAK 362 (369)
Q Consensus 328 ~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~~~~ 362 (369)
+..+|.++|..+|.+.+. ..+...+-+.++...
T Consensus 474 --d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 474 --DISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 788999999999999854 666666666665544
No 126
>PRK00654 glgA glycogen synthase; Provisional
Probab=95.15 E-value=0.22 Score=48.75 Aligned_cols=134 Identities=13% Similarity=0.110 Sum_probs=73.0
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcc---hhcccCCCcEE-EeccChH--HhhcccC
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLKASDKYFLWVVRESEQSKLPEN---FSDETSQKGLV-VNWCPQL--GVLAHEA 272 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~p~~--~iL~~~~ 272 (369)
+..+++..|.... .....+-+.+..+.+.+.++++. |.... .+.+. ...+.+.++.+ .+|-.+. .+++.+|
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lviv-G~g~~-~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aD 358 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLL-GTGDP-ELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGAD 358 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEE-ecCcH-HHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCC
Confidence 3456677777753 22333333333333346676655 43311 01111 12223344443 4553232 5789999
Q ss_pred cCceeec---CCh-hhHHHHHhhCCceeecCCCC--ChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhc
Q 048393 273 TGCFLTH---CGW-NSTMEALGLGVPMLAMPQWS--DQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 273 ~~~~I~h---gG~-~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
+ ||.- -|. .+.+||+++|+|.|+....+ |...+...-.+. +.|+.++.. +.++|.++|.++++
T Consensus 359 v--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~~~-----d~~~la~~i~~~l~ 427 (466)
T PRK00654 359 M--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFDDF-----NAEDLLRALRRALE 427 (466)
T ss_pred E--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeCCC-----CHHHHHHHHHHHHH
Confidence 8 7743 233 48999999999999864322 221111001233 568888744 78999999998875
No 127
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.74 E-value=0.17 Score=45.45 Aligned_cols=95 Identities=21% Similarity=0.262 Sum_probs=61.4
Q ss_pred eccChHHhhcccCcCceeecCChhhHH-HHHhhCCceeecCCCCChhH--HHHHHHhhcCceEEecCCCCCCcCHHHHHH
Q 048393 260 NWCPQLGVLAHEATGCFLTHCGWNSTM-EALGLGVPMLAMPQWSDQST--NAKYIMDVGKMGLKVPADEKGIVRREAIAH 336 (369)
Q Consensus 260 ~~~p~~~iL~~~~~~~~I~hgG~~s~~-eal~~GvP~i~~P~~~dQ~~--na~~~~~~~g~g~~~~~~~~~~~~~~~l~~ 336 (369)
.|-...++|.++++ .|--.| |-. .++-.|||+|.+|-.+-|+. .|++=.+++|+.+.+-.. .+..-..
T Consensus 301 sqqsfadiLH~ada--algmAG--TAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~-----~aq~a~~ 371 (412)
T COG4370 301 SQQSFADILHAADA--ALGMAG--TATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP-----EAQAAAQ 371 (412)
T ss_pred eHHHHHHHHHHHHH--HHHhcc--chHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC-----chhhHHH
Confidence 44444567777776 554443 333 35678999999999998876 788888888988887643 3333334
Q ss_pred HHHHHhcCCcH-HHHHHH----------HHHHHHHHHH
Q 048393 337 CINEILEGERG-KEIKQN----------ADKWRNFAKE 363 (369)
Q Consensus 337 ~i~~~l~~~~~-~~~~~~----------a~~l~~~~~~ 363 (369)
+..+++.|++. ..+|.| ++++++.+++
T Consensus 372 ~~q~ll~dp~r~~air~nGqrRiGqaGaa~rIAe~l~e 409 (412)
T COG4370 372 AVQELLGDPQRLTAIRHNGQRRIGQAGAARRIAEELGE 409 (412)
T ss_pred HHHHHhcChHHHHHHHhcchhhccCcchHHHHHHHHHH
Confidence 44458888854 445533 5556665554
No 128
>PHA01630 putative group 1 glycosyl transferase
Probab=94.16 E-value=0.6 Score=43.49 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=28.7
Q ss_pred ccChH---HhhcccCcCcee--ecCC--hhhHHHHHhhCCceeecCCC
Q 048393 261 WCPQL---GVLAHEATGCFL--THCG--WNSTMEALGLGVPMLAMPQW 301 (369)
Q Consensus 261 ~~p~~---~iL~~~~~~~~I--~hgG--~~s~~eal~~GvP~i~~P~~ 301 (369)
++|+. .+++.+|+ |+ ++.. ..++.||+++|+|+|+.-..
T Consensus 197 ~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~g 242 (331)
T PHA01630 197 PLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKG 242 (331)
T ss_pred cCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCC
Confidence 46644 57899999 65 3322 46899999999999997543
No 129
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=93.88 E-value=0.094 Score=39.22 Aligned_cols=55 Identities=15% Similarity=0.219 Sum_probs=44.2
Q ss_pred hHHHHHhccCCCCceEEEEeCccccC---CH--HHHHHHHHHHHhCCCcEEEEEeCCccC
Q 048393 188 ESCMKWLNDRANGSVVYVSFGSMATL---KM--EQMEELAWGLKASDKYFLWVVRESEQS 242 (369)
Q Consensus 188 ~~~~~~l~~~~~~~~i~vs~Gs~~~~---~~--~~~~~~~~~l~~~~~~~i~~~~~~~~~ 242 (369)
..+..|+...+.++.|.|++||.... .. ..+..+++++.+.+..+|..+......
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~ 87 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRA 87 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCG
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHH
Confidence 44556888888999999999999853 22 368899999999999999998865433
No 130
>PRK10125 putative glycosyl transferase; Provisional
Probab=93.37 E-value=1.4 Score=42.41 Aligned_cols=100 Identities=14% Similarity=0.093 Sum_probs=60.2
Q ss_pred HHHHHHHHHhCCCc-EEEEEeCCccCCCCcchhcccCCCcEEEeccC-h---HHhhcccCcCceeec----CChhhHHHH
Q 048393 218 MEELAWGLKASDKY-FLWVVRESEQSKLPENFSDETSQKGLVVNWCP-Q---LGVLAHEATGCFLTH----CGWNSTMEA 288 (369)
Q Consensus 218 ~~~~~~~l~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~---~~iL~~~~~~~~I~h----gG~~s~~ea 288 (369)
+..+++++...+.+ -++.+|..... . ..++...++.. + .++++.+|+ ||.- |-.++++||
T Consensus 258 ~~~li~A~~~l~~~~~L~ivG~g~~~-~--------~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp~vilEA 326 (405)
T PRK10125 258 DQQLVREMMALGDKIELHTFGKFSPF-T--------AGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYPLILCEA 326 (405)
T ss_pred HHHHHHHHHhCCCCeEEEEEcCCCcc-c--------ccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCcCHHHHH
Confidence 46677777765433 34455543211 1 12344455542 2 256777888 7753 334689999
Q ss_pred HhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHH
Q 048393 289 LGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCIN 339 (369)
Q Consensus 289 l~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~ 339 (369)
+++|+|+|+....+ ..+ +... +.|+.++.. +.+.|.++++
T Consensus 327 mA~G~PVVat~~gG----~~E-iv~~-~~G~lv~~~-----d~~~La~~~~ 366 (405)
T PRK10125 327 LSIGVPVIATHSDA----ARE-VLQK-SGGKTVSEE-----EVLQLAQLSK 366 (405)
T ss_pred HHcCCCEEEeCCCC----hHH-hEeC-CcEEEECCC-----CHHHHHhccC
Confidence 99999999987764 122 2233 568888754 6777776543
No 131
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=93.32 E-value=2.3 Score=41.28 Aligned_cols=172 Identities=16% Similarity=0.181 Sum_probs=97.7
Q ss_pred hhccccccEEEecchHhhhHHHHHHHhcC-CCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCce
Q 048393 124 FYNIDKADWILCNTFYELEKEVTEWLGKQ-HWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSV 202 (369)
Q Consensus 124 ~~~~~~~~~~li~s~~ele~~~~~~~~~~-~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~ 202 (369)
+....+.++++++|-.+-+. ....+++. ...+.++|-+.+. .. ..+.+..+
T Consensus 234 l~~~~~~~~iIv~T~~q~~d-i~~r~~~~~~~~~ip~g~i~~~--------------------------~~-~~r~~~~~ 285 (438)
T TIGR02919 234 LDNETRNKKIIIPNKNEYEK-IKELLDNEYQEQISQLGYLYPF--------------------------KK-DNKYRKQA 285 (438)
T ss_pred hcCccccCeEEeCCHHHHHH-HHHHhCcccCceEEEEEEEEee--------------------------cc-ccCCcccE
Confidence 34456778899999543332 33344433 1235566655210 00 11223447
Q ss_pred EEEEeCccccCCHHHHHHHHHHHHhC-CCcEEEEEeCCccCCCCcchhcccCCCcEEE-eccC-hH-HhhcccCcCceee
Q 048393 203 VYVSFGSMATLKMEQMEELAWGLKAS-DKYFLWVVRESEQSKLPENFSDETSQKGLVV-NWCP-QL-GVLAHEATGCFLT 278 (369)
Q Consensus 203 i~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-~~-~iL~~~~~~~~I~ 278 (369)
++++ +...++.+....++. +..+-...++.-...|. .+ .+. +|+.+. ++.+ +. +++..+++=+-|+
T Consensus 286 l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te~s~kL~-~L-~~y-~nvvly~~~~~~~l~~ly~~~dlyLdin 355 (438)
T TIGR02919 286 LILT-------NSDQIEHLEEIVQALPDYHFHIAALTEMSSKLM-SL-DKY-DNVKLYPNITTQKIQELYQTCDIYLDIN 355 (438)
T ss_pred EEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCcccHHHH-HH-Hhc-CCcEEECCcChHHHHHHHHhccEEEEcc
Confidence 7776 234455555555553 34544333322011111 11 122 555554 6677 33 8999999988888
Q ss_pred cCCh--hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 279 HCGW--NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 279 hgG~--~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
||.. .++.||+.+|+|++..=.... +...+. . |..+..+ +.+++.++|.++|.++
T Consensus 356 ~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~---~-g~l~~~~-----~~~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 356 HGNEILNAVRRAFEYNLLILGFEETAH---NRDFIA---S-ENIFEHN-----EVDQLISKLKDLLNDP 412 (438)
T ss_pred ccccHHHHHHHHHHcCCcEEEEecccC---Cccccc---C-CceecCC-----CHHHHHHHHHHHhcCH
Confidence 8765 799999999999998753322 112221 1 4455533 7899999999999987
No 132
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=93.23 E-value=0.54 Score=34.43 Aligned_cols=64 Identities=19% Similarity=0.167 Sum_probs=41.6
Q ss_pred cCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcC-ceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHH
Q 048393 279 HCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGK-MGLKVPADEKGIVRREAIAHCINEILEGERG-KEIKQNAD 355 (369)
Q Consensus 279 hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g-~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~ 355 (369)
+|-..-+.|++++|+|+|.-+. ......+. - | -++.. . +.+++.++|..+++|++. +++.++++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~-~-~~~~~~~------~-~~~el~~~i~~ll~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFE-D-GEHIITY------N-DPEELAEKIEYLLENPEERRRIAKNAR 74 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcC-C-CCeEEEE------C-CHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 4555689999999999998765 22222221 2 2 23332 2 789999999999999842 34444443
No 133
>PLN02316 synthase/transferase
Probab=92.49 E-value=2.9 Score=44.73 Aligned_cols=83 Identities=10% Similarity=0.002 Sum_probs=53.3
Q ss_pred CCcEEEeccChH---HhhcccCcCceeec----CChhhHHHHHhhCCceeecCCCC--ChhHH-------HHHHHhhcCc
Q 048393 254 QKGLVVNWCPQL---GVLAHEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWS--DQSTN-------AKYIMDVGKM 317 (369)
Q Consensus 254 ~~~~~~~~~p~~---~iL~~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~--dQ~~n-------a~~~~~~~g~ 317 (369)
+++.+....+.. .+++.+|+ |+.- +=..+.+||+++|+|.|+-...+ |.... ++..-.. +.
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~-~t 976 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLE-PN 976 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccC-Cc
Confidence 456665444543 58899998 8843 33468999999999888754322 22111 1111112 46
Q ss_pred eEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 318 GLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 318 g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
|..+.. .+++.|..+|.+++.+
T Consensus 977 Gflf~~-----~d~~aLa~AL~raL~~ 998 (1036)
T PLN02316 977 GFSFDG-----ADAAGVDYALNRAISA 998 (1036)
T ss_pred eEEeCC-----CCHHHHHHHHHHHHhh
Confidence 888774 4889999999999875
No 134
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=90.64 E-value=0.58 Score=39.90 Aligned_cols=49 Identities=16% Similarity=0.119 Sum_probs=36.6
Q ss_pred CCCcEEEeccCh-H---HhhcccCcCceeecCC----hhhHHHHHhhCCceeecCCCCC
Q 048393 253 SQKGLVVNWCPQ-L---GVLAHEATGCFLTHCG----WNSTMEALGLGVPMLAMPQWSD 303 (369)
Q Consensus 253 ~~~~~~~~~~p~-~---~iL~~~~~~~~I~hgG----~~s~~eal~~GvP~i~~P~~~d 303 (369)
..|+.+.++++. . .+++.+++ +|+-.. .+++.||+.+|+|+|+.+..+.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 467888888632 2 34444888 887776 7899999999999999886543
No 135
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=88.84 E-value=2 Score=39.56 Aligned_cols=142 Identities=13% Similarity=0.102 Sum_probs=79.0
Q ss_pred HHhccCCCCceEEEEeCccc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEe--ccChH-
Q 048393 192 KWLNDRANGSVVYVSFGSMA---TLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN--WCPQL- 265 (369)
Q Consensus 192 ~~l~~~~~~~~i~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~- 265 (369)
+++....+++.|.+..|+.. ..+.+.+.++++.+.+.+.++++..+........+.+.+..+ +..+.+ -+++.
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~-~~~l~g~~sL~el~ 249 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALP-GAVVLPKMSLAEVA 249 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCC-CCeecCCCCHHHHH
Confidence 34443334556666666543 356788889999987667777766454321111112222111 122333 34455
Q ss_pred HhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCce-EEecCCCCCCcCHHHHHHHHHHHh
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMG-LKVPADEKGIVRREAIAHCINEIL 342 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g-~~~~~~~~~~~~~~~l~~~i~~~l 342 (369)
.+++++++ +|+- ..|.+.=|.+.|+|.|++=-..+ ..+..=. |-. ..+.......++++++.++++++|
T Consensus 250 ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~lfg~t~----p~~~~P~-~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 250 ALLAGADA--VVGV-DTGLTHLAAALDKPTVTLYGATD----PGRTGGY-GKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHHHcCCE--EEeC-CChHHHHHHHcCCCEEEEECCCC----HhhcccC-CCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 78999998 9986 46777778889999996511111 1111001 211 111111112789999999998775
No 136
>PLN02939 transferase, transferring glycosyl groups
Probab=88.83 E-value=4.7 Score=42.66 Aligned_cols=82 Identities=10% Similarity=0.119 Sum_probs=54.3
Q ss_pred CCcEEEeccChH---HhhcccCcCceeec----CChhhHHHHHhhCCceeecCCCC--ChhHH--HHHH-HhhcCceEEe
Q 048393 254 QKGLVVNWCPQL---GVLAHEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWS--DQSTN--AKYI-MDVGKMGLKV 321 (369)
Q Consensus 254 ~~~~~~~~~p~~---~iL~~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~--dQ~~n--a~~~-~~~~g~g~~~ 321 (369)
+++.+..+.+.. .+++.+|+ ||.- +-..+.+||+++|+|.|+....+ |...+ ...+ ++. +.|..+
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg-~NGfLf 913 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVEL-RNGFTF 913 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCC-CceEEe
Confidence 567777777764 58999998 8853 22368999999999999876533 22211 1111 123 467777
Q ss_pred cCCCCCCcCHHHHHHHHHHHhc
Q 048393 322 PADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 322 ~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
.. -+.+.|.++|.+++.
T Consensus 914 ~~-----~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 LT-----PDEQGLNSALERAFN 930 (977)
T ss_pred cC-----CCHHHHHHHHHHHHH
Confidence 64 378888888888764
No 137
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=87.92 E-value=5.6 Score=36.68 Aligned_cols=59 Identities=19% Similarity=0.166 Sum_probs=42.0
Q ss_pred cChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhH---HHHHHHhhcCceEEec
Q 048393 262 CPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQST---NAKYIMDVGKMGLKVP 322 (369)
Q Consensus 262 ~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~---na~~~~~~~g~g~~~~ 322 (369)
=|...+|+.++. +|||==..+++.||+..|+|+.++|...-... ....+++. |.-..+.
T Consensus 220 nPy~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~-g~~r~~~ 281 (311)
T PF06258_consen 220 NPYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEER-GAVRPFT 281 (311)
T ss_pred CcHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHC-CCEEECC
Confidence 366788998886 56666677999999999999999998762222 33445555 5555444
No 138
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=86.72 E-value=5.3 Score=39.00 Aligned_cols=71 Identities=13% Similarity=0.031 Sum_probs=50.1
Q ss_pred eccChH---HhhcccCcCceee---cCCh-hhHHHHHhhCCc----eeecCCCCChhHHHHHHHhhcCceEEecCCCCCC
Q 048393 260 NWCPQL---GVLAHEATGCFLT---HCGW-NSTMEALGLGVP----MLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGI 328 (369)
Q Consensus 260 ~~~p~~---~iL~~~~~~~~I~---hgG~-~s~~eal~~GvP----~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 328 (369)
+.+++. .+++.+|+ |+. +=|. .++.||+++|+| +|+--..+-- .. . +-|+.++.
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~---l-~~gllVnP----- 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QE---L-NGALLVNP----- 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HH---h-CCcEEECC-----
Confidence 455555 56888888 775 3365 588899999999 6665554422 22 2 34777774
Q ss_pred cCHHHHHHHHHHHhcCC
Q 048393 329 VRREAIAHCINEILEGE 345 (369)
Q Consensus 329 ~~~~~l~~~i~~~l~~~ 345 (369)
.+.+.+.++|.++++.+
T Consensus 407 ~d~~~lA~aI~~aL~~~ 423 (456)
T TIGR02400 407 YDIDGMADAIARALTMP 423 (456)
T ss_pred CCHHHHHHHHHHHHcCC
Confidence 48999999999999865
No 139
>PRK14099 glycogen synthase; Provisional
Probab=86.61 E-value=5.1 Score=39.49 Aligned_cols=93 Identities=16% Similarity=0.238 Sum_probs=51.7
Q ss_pred CCc-EEEeccChH-Hhh-cccCcCceee---cCC-hhhHHHHHhhCCceeecCCCC--ChhHHHH-HH--HhhcCceEEe
Q 048393 254 QKG-LVVNWCPQL-GVL-AHEATGCFLT---HCG-WNSTMEALGLGVPMLAMPQWS--DQSTNAK-YI--MDVGKMGLKV 321 (369)
Q Consensus 254 ~~~-~~~~~~p~~-~iL-~~~~~~~~I~---hgG-~~s~~eal~~GvP~i~~P~~~--dQ~~na~-~~--~~~~g~g~~~ 321 (369)
+++ .+.+|-.+. .++ +.+|+ ||. +=| ..+.+||+++|+|.|+....+ |...+.. .. +.. +.|+.+
T Consensus 350 ~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~-~~G~l~ 426 (485)
T PRK14099 350 GQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGV-ATGVQF 426 (485)
T ss_pred CCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCC-CceEEe
Confidence 344 455663333 333 45777 774 223 357899999997766654322 3221110 00 111 358887
Q ss_pred cCCCCCCcCHHHHHHHHHH---HhcCCcH-HHHHHHH
Q 048393 322 PADEKGIVRREAIAHCINE---ILEGERG-KEIKQNA 354 (369)
Q Consensus 322 ~~~~~~~~~~~~l~~~i~~---~l~~~~~-~~~~~~a 354 (369)
+. -+.+.|.++|.+ +++|++. ..+.+++
T Consensus 427 ~~-----~d~~~La~ai~~a~~l~~d~~~~~~l~~~~ 458 (485)
T PRK14099 427 SP-----VTADALAAALRKTAALFADPVAWRRLQRNG 458 (485)
T ss_pred CC-----CCHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence 74 388999999987 5666532 3444443
No 140
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=86.40 E-value=4.8 Score=36.16 Aligned_cols=81 Identities=14% Similarity=0.146 Sum_probs=49.4
Q ss_pred HHHHHHHH-HHhC-CCcEEEEEeCCccCCCCcchhcc---cCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhh
Q 048393 217 QMEELAWG-LKAS-DKYFLWVVRESEQSKLPENFSDE---TSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGL 291 (369)
Q Consensus 217 ~~~~~~~~-l~~~-~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~ 291 (369)
.+..++.. .+.. +..++++.+.........+...+ ....+.+..-.+-.++|.+++. +||-.+ .+-.||+.+
T Consensus 141 ~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~ 217 (269)
T PF05159_consen 141 DFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLH 217 (269)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHc
Confidence 34444443 3333 67888777653221111122111 1223344456677799999999 888875 477899999
Q ss_pred CCceeecCC
Q 048393 292 GVPMLAMPQ 300 (369)
Q Consensus 292 GvP~i~~P~ 300 (369)
|+|++++..
T Consensus 218 gkpVi~~G~ 226 (269)
T PF05159_consen 218 GKPVIVFGR 226 (269)
T ss_pred CCceEEecC
Confidence 999999763
No 141
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=85.49 E-value=2.6 Score=41.23 Aligned_cols=72 Identities=13% Similarity=0.043 Sum_probs=48.8
Q ss_pred EeccChH---HhhcccCcCceee---cCCh-hhHHHHHhhCCc----eeecCCCCChhHHHHHHHhhcCceEEecCCCCC
Q 048393 259 VNWCPQL---GVLAHEATGCFLT---HCGW-NSTMEALGLGVP----MLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKG 327 (369)
Q Consensus 259 ~~~~p~~---~iL~~~~~~~~I~---hgG~-~s~~eal~~GvP----~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~ 327 (369)
.+++++. .+++.+|+ ||. +-|. .++.||+++|+| +|+--..+--.. . ..|+.++.
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-------~-~~g~lv~p---- 411 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-------L-SGALLVNP---- 411 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchhh-------c-CCCEEECC----
Confidence 3566655 56889988 763 3454 478999999999 554433221111 2 34777774
Q ss_pred CcCHHHHHHHHHHHhcCC
Q 048393 328 IVRREAIAHCINEILEGE 345 (369)
Q Consensus 328 ~~~~~~l~~~i~~~l~~~ 345 (369)
.+.+++.++|.++++++
T Consensus 412 -~d~~~la~ai~~~l~~~ 428 (460)
T cd03788 412 -YDIDEVADAIHRALTMP 428 (460)
T ss_pred -CCHHHHHHHHHHHHcCC
Confidence 38899999999999875
No 142
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=83.97 E-value=34 Score=31.32 Aligned_cols=40 Identities=15% Similarity=0.278 Sum_probs=34.0
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccc
Q 048393 24 TFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.+.+++++. +||+.+. .+.+-+..+|-.+|+|++.|.-..
T Consensus 75 ~L~ki~~~~-kpdv~i~-~~s~~l~rvafgLg~psIi~~D~e 114 (346)
T COG1817 75 KLSKIIAEF-KPDVAIG-KHSPELPRVAFGLGIPSIIFVDNE 114 (346)
T ss_pred HHHHHHhhc-CCceEee-cCCcchhhHHhhcCCceEEecCCh
Confidence 577788888 9999999 667778999999999999986655
No 143
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=83.70 E-value=19 Score=33.39 Aligned_cols=144 Identities=19% Similarity=0.238 Sum_probs=86.0
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHh---------CCC-cEEEE-EeCCccCCCCcchhcc----cCCCcEEE-ec
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKA---------SDK-YFLWV-VRESEQSKLPENFSDE----TSQKGLVV-NW 261 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~---------~~~-~~i~~-~~~~~~~~~~~~~~~~----~~~~~~~~-~~ 261 (369)
++++.++|| |.+..+.+.+..+++|+.. .+. +.+.. +|++ .+.+.+.+. .-.++.+. .|
T Consensus 252 ~~~pallvs--STswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG---PlkE~Y~~~I~~~~~~~v~~~tpW 326 (444)
T KOG2941|consen 252 PERPALLVS--STSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG---PLKEKYSQEIHEKNLQHVQVCTPW 326 (444)
T ss_pred cCCCeEEEe--cCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC---chhHHHHHHHHHhcccceeeeecc
Confidence 456677776 3444566667777777762 121 33333 3332 222222221 11345443 67
Q ss_pred cC---hHHhhcccCcCceeecCChh-----hHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHH
Q 048393 262 CP---QLGVLAHEATGCFLTHCGWN-----STMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREA 333 (369)
Q Consensus 262 ~p---~~~iL~~~~~~~~I~hgG~~-----s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~ 333 (369)
+. .-.+|+.+|+++.+|-...| -+....-+|+|++.+-+. ---+.|++- --|+..+ ++++
T Consensus 327 L~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk----cl~ELVkh~-eNGlvF~-------Ds~e 394 (444)
T KOG2941|consen 327 LEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK----CLDELVKHG-ENGLVFE-------DSEE 394 (444)
T ss_pred cccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch----hHHHHHhcC-CCceEec-------cHHH
Confidence 64 33799999999999877665 456667788888877542 122344444 5577765 6888
Q ss_pred HHHHHHHHhc----CCcH-HHHHHHHHHHH
Q 048393 334 IAHCINEILE----GERG-KEIKQNADKWR 358 (369)
Q Consensus 334 l~~~i~~~l~----~~~~-~~~~~~a~~l~ 358 (369)
|.+.+..+++ |.+- +.+++|+++-+
T Consensus 395 La~ql~~lf~~fp~~a~~l~~lkkn~~e~~ 424 (444)
T KOG2941|consen 395 LAEQLQMLFKNFPDNADELNQLKKNLREEQ 424 (444)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHhhHHHH
Confidence 9998888887 3332 56777776653
No 144
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=82.14 E-value=11 Score=34.92 Aligned_cols=134 Identities=12% Similarity=0.122 Sum_probs=83.1
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHH---hCCCcEEEEEeCCcc-CCCCcchh---cc-cC-CCcEE-EeccChH---Hh
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLK---ASDKYFLWVVRESEQ-SKLPENFS---DE-TS-QKGLV-VNWCPQL---GV 267 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~~-~~~~~~~~---~~-~~-~~~~~-~~~~p~~---~i 267 (369)
..+.|-.|..+..+-+.++.+ +.+. ..+.+++.-.+-+.. ....+.+. .+ .+ +++.+ .+++|-. ++
T Consensus 184 ~~ltILvGNSgd~sNnHieaL-~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~l 262 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEAL-EALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLAL 262 (360)
T ss_pred CceEEEEcCCCCCCccHHHHH-HHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHH
Confidence 355666676664443333332 2222 245677766554321 11111111 11 12 35654 4688755 68
Q ss_pred hcccCcCceeec--CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhc
Q 048393 268 LAHEATGCFLTH--CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 268 L~~~~~~~~I~h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
|+.++++.|.+. -|.|+++-.+..|+|+++-- +...-+.+.+. |+-+....+ .++...++++=+++.+
T Consensus 263 L~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~----~np~~~~l~~~-~ipVlf~~d---~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 263 LSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSR----DNPFWQDLKEQ-GIPVLFYGD---ELDEALVREAQRQLAN 332 (360)
T ss_pred HHhCCEEEEeechhhhHhHHHHHHHcCCeEEEec----CChHHHHHHhC-CCeEEeccc---cCCHHHHHHHHHHHhh
Confidence 999999888774 68999999999999999753 33344556666 777666655 7999999999888864
No 145
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=81.57 E-value=4.3 Score=38.28 Aligned_cols=116 Identities=16% Similarity=0.162 Sum_probs=61.8
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEE-eccChHHhhcccCcCceeecCChhhHHHHHhhCCcee
Q 048393 218 MEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVV-NWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPML 296 (369)
Q Consensus 218 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i 296 (369)
...+. .+...++.+++..+.......... ....+++... +..+-.++|..+|+ +||-- .+.+.|.+..++|+|
T Consensus 219 ~~~l~-~~~~~~~~li~k~Hp~~~~~~~~~--~~~~~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPii 292 (369)
T PF04464_consen 219 FEKLN-FLLKNNYVLIIKPHPNMKKKFKDF--KEDNSNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPII 292 (369)
T ss_dssp HHHHH-HHHTTTEEEEE--SHHHHTT------TT-TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EE
T ss_pred HHHHH-HHhCCCcEEEEEeCchhhhchhhh--hccCCcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEE
Confidence 44444 566677777777654322111110 1123455554 34455699999999 99998 468899999999999
Q ss_pred ecCCCCChhHHHHHHHhhcCceEEecCCCCC--CcCHHHHHHHHHHHhcCC
Q 048393 297 AMPQWSDQSTNAKYIMDVGKMGLKVPADEKG--IVRREAIAHCINEILEGE 345 (369)
Q Consensus 297 ~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~--~~~~~~l~~~i~~~l~~~ 345 (369)
....-.|.+.+. . |.-.-......| .-+.++|.++|.+++++.
T Consensus 293 fy~~D~~~Y~~~-----r-g~~~~~~~~~pg~~~~~~~eL~~~i~~~~~~~ 337 (369)
T PF04464_consen 293 FYQPDLEEYEKE-----R-GFYFDYEEDLPGPIVYNFEELIEAIENIIENP 337 (369)
T ss_dssp EE-TTTTTTTTT-----S-SBSS-TTTSSSS-EESSHHHHHHHHTTHHHHH
T ss_pred EEeccHHHHhhc-----c-CCCCchHhhCCCceeCCHHHHHHHHHhhhhCC
Confidence 776655555332 1 322221111000 236889999998888654
No 146
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=81.15 E-value=6.1 Score=39.45 Aligned_cols=80 Identities=11% Similarity=0.055 Sum_probs=47.8
Q ss_pred hHHhhcccCcCceee---cCCh-hhHHHHHhhCCceeecCCCC-ChhHHHHHHHhhcCceEEecCCCCC--CcCHHHHHH
Q 048393 264 QLGVLAHEATGCFLT---HCGW-NSTMEALGLGVPMLAMPQWS-DQSTNAKYIMDVGKMGLKVPADEKG--IVRREAIAH 336 (369)
Q Consensus 264 ~~~iL~~~~~~~~I~---hgG~-~s~~eal~~GvP~i~~P~~~-dQ~~na~~~~~~~g~g~~~~~~~~~--~~~~~~l~~ 336 (369)
..++++.+++ ||. +=|+ .+++||+++|+|+|.-...+ ..... ..+......|+.+...... .-+.+.|.+
T Consensus 468 y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 468 YEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred hHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 4578888888 555 3454 59999999999999877643 22222 1111110146666422100 124677888
Q ss_pred HHHHHhcCCc
Q 048393 337 CINEILEGER 346 (369)
Q Consensus 337 ~i~~~l~~~~ 346 (369)
++.++++.+.
T Consensus 545 ~m~~~~~~~~ 554 (590)
T cd03793 545 YMYEFCQLSR 554 (590)
T ss_pred HHHHHhCCcH
Confidence 8888886553
No 147
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=79.58 E-value=38 Score=30.16 Aligned_cols=80 Identities=21% Similarity=0.344 Sum_probs=51.6
Q ss_pred CCcEEEeccCh---HHhhcccCcCceeec---CChh-hHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCC
Q 048393 254 QKGLVVNWCPQ---LGVLAHEATGCFLTH---CGWN-STMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEK 326 (369)
Q Consensus 254 ~~~~~~~~~p~---~~iL~~~~~~~~I~h---gG~~-s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 326 (369)
.++...++++. ..+++.+++ ++.- .|.+ ++.||+++|+|+|..... .....+.+. +.|. +...
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~~-~~g~-~~~~-- 326 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVEDG-ETGL-LVPP-- 326 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcCC-CceE-ecCC--
Confidence 56677788882 256777777 5555 2443 469999999999876543 222222222 2366 3322
Q ss_pred CCcCHHHHHHHHHHHhcCC
Q 048393 327 GIVRREAIAHCINEILEGE 345 (369)
Q Consensus 327 ~~~~~~~l~~~i~~~l~~~ 345 (369)
.+.+.+.+++..++++.
T Consensus 327 --~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 327 --GDVEELADALEQLLEDP 343 (381)
T ss_pred --CCHHHHHHHHHHHhcCH
Confidence 26889999999998876
No 148
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=78.79 E-value=8.1 Score=31.35 Aligned_cols=142 Identities=15% Similarity=0.193 Sum_probs=67.2
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCC
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCG 281 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG 281 (369)
.|.|-+||.. +....+++...|++.+..+-..+-+.. ..|+.+ ..++. -+.+...++||.=.|
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~saH--R~p~~l----------~~~~~---~~~~~~~~viIa~AG 64 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASAH--RTPERL----------LEFVK---EYEARGADVIIAVAG 64 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--TT--TSHHHH----------HHHHH---HTTTTTESEEEEEEE
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEecc--CCHHHH----------HHHHH---HhccCCCEEEEEECC
Confidence 4555566654 567788888889888865544333321 122211 11111 112222334888887
Q ss_pred hhhHHHHHh---hCCceeecCCCCChhHHHH----HHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHH
Q 048393 282 WNSTMEALG---LGVPMLAMPQWSDQSTNAK----YIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNA 354 (369)
Q Consensus 282 ~~s~~eal~---~GvP~i~~P~~~dQ~~na~----~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a 354 (369)
...-+-.+. .-.|+|.+|....+..... .++---|+++..-.- ++..++.-+...|-. +.|+ .++++.
T Consensus 65 ~~a~Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i-~~~~nAA~~A~~ILa-~~d~---~l~~kl 139 (150)
T PF00731_consen 65 MSAALPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGI-NNGFNAALLAARILA-LKDP---ELREKL 139 (150)
T ss_dssp SS--HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SS-THHHHHHHHHHHHHH-TT-H---HHHHHH
T ss_pred CcccchhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEc-cCchHHHHHHHHHHh-cCCH---HHHHHH
Confidence 754333322 3789999998766442221 111111444333210 002233333333322 2667 899999
Q ss_pred HHHHHHHHHHH
Q 048393 355 DKWRNFAKEAV 365 (369)
Q Consensus 355 ~~l~~~~~~~~ 365 (369)
+..+++.++.+
T Consensus 140 ~~~~~~~~~~v 150 (150)
T PF00731_consen 140 RAYREKMKEKV 150 (150)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHccC
Confidence 88888887754
No 149
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=77.35 E-value=21 Score=31.80 Aligned_cols=130 Identities=15% Similarity=0.211 Sum_probs=70.1
Q ss_pred HHHHHhccCCCCceEEEEeCccccC--CHHH----HHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccC-CCcEE---
Q 048393 189 SCMKWLNDRANGSVVYVSFGSMATL--KMEQ----MEELAWGLKASDKYFLWVVRESEQSKLPENFSDETS-QKGLV--- 258 (369)
Q Consensus 189 ~~~~~l~~~~~~~~i~vs~Gs~~~~--~~~~----~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~--- 258 (369)
-.+..++. ++..+.++-.|+.... ..++ ...+.+.+++-+..|+.++..........-+..+.. ..+.+
T Consensus 152 ~~~~~~p~-~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~ 230 (329)
T COG3660 152 AFKHLLPL-PRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNN 230 (329)
T ss_pred HHHhhCCC-CCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCC
Confidence 33444433 3333666666776543 2322 223556677788899988765321111111111111 11111
Q ss_pred --EeccChHHhhcccCcCceeecC-ChhhHHHHHhhCCceeec--CCC-CChh-HHHHHHHhhcCceEEec
Q 048393 259 --VNWCPQLGVLAHEATGCFLTHC-GWNSTMEALGLGVPMLAM--PQW-SDQS-TNAKYIMDVGKMGLKVP 322 (369)
Q Consensus 259 --~~~~p~~~iL~~~~~~~~I~hg-G~~s~~eal~~GvP~i~~--P~~-~dQ~-~na~~~~~~~g~g~~~~ 322 (369)
.++-|..++|+.++. +|.-. ..|.+.||+..|+|+-++ |.+ .+-+ ..-+.+++. +++...+
T Consensus 231 ~d~g~NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~eq-~~AR~f~ 298 (329)
T COG3660 231 EDTGYNPYIDMLAAADY--IISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVEQ-KIARPFE 298 (329)
T ss_pred CCCCCCchHHHHhhcce--EEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHHh-hhccccC
Confidence 245688899999987 66554 558999999999998753 333 2222 233445555 6665444
No 150
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=76.26 E-value=7.5 Score=32.14 Aligned_cols=35 Identities=11% Similarity=0.259 Sum_probs=27.2
Q ss_pred HHHHHHHHcHHHHHHHHHhcCCCCEEEECCCcchHH
Q 048393 13 YVDRFWKIGLQTFTELVERMNDVDCIVYDSFLPWAL 48 (369)
Q Consensus 13 ~~~~~~~~~~~~l~~ll~~~~~~D~vI~D~~~~~~~ 48 (369)
....+.....+.+.++|++. +||+||+-..+....
T Consensus 69 ~~~~~~~~~~~~l~~~l~~~-~PD~IIsThp~~~~~ 103 (169)
T PF06925_consen 69 FLSALSRLFARRLIRLLREF-QPDLIISTHPFPAQV 103 (169)
T ss_pred HHHHHHHHHHHHHHHHHhhc-CCCEEEECCcchhhh
Confidence 44566777778899999988 999999998874333
No 151
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=74.78 E-value=23 Score=32.29 Aligned_cols=95 Identities=13% Similarity=0.130 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhh----C
Q 048393 217 QMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGL----G 292 (369)
Q Consensus 217 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~----G 292 (369)
.+..+.+.+++.+..+.+..... ..+... + . ...+..++...+++ +|+-||=||+.+++.. +
T Consensus 22 ~~~~i~~~L~~~g~~v~v~~~~~--~~~~~~-------~--~-~~~~~~~~~~~~d~--vi~~GGDGt~l~~~~~~~~~~ 87 (291)
T PRK02155 22 PLESLAAFLAKRGFEVVFEADTA--RNIGLT-------G--Y-PALTPEEIGARADL--AVVLGGDGTMLGIGRQLAPYG 87 (291)
T ss_pred HHHHHHHHHHHCCCEEEEecchh--hhcCcc-------c--c-cccChhHhccCCCE--EEEECCcHHHHHHHHHhcCCC
Confidence 46667777877777766542211 000000 0 0 00122233345666 9999999999999773 7
Q ss_pred CceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 293 VPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 293 vP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+|++++-.. .+|... .++.+++.+++.++++++
T Consensus 88 ~pilGIn~G--------------~lGFL~------~~~~~~~~~~l~~~~~g~ 120 (291)
T PRK02155 88 VPLIGINHG--------------RLGFIT------DIPLDDMQETLPPMLAGN 120 (291)
T ss_pred CCEEEEcCC--------------Cccccc------cCCHHHHHHHHHHHHcCC
Confidence 788877421 122221 345666777777766554
No 152
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=74.60 E-value=20 Score=37.77 Aligned_cols=64 Identities=17% Similarity=0.146 Sum_probs=45.6
Q ss_pred HhhcccCcCceeec---CChh-hHHHHHhhCCc---eeecC-CCCChhHHHHHHHhhcC-ceEEecCCCCCCcCHHHHHH
Q 048393 266 GVLAHEATGCFLTH---CGWN-STMEALGLGVP---MLAMP-QWSDQSTNAKYIMDVGK-MGLKVPADEKGIVRREAIAH 336 (369)
Q Consensus 266 ~iL~~~~~~~~I~h---gG~~-s~~eal~~GvP---~i~~P-~~~dQ~~na~~~~~~~g-~g~~~~~~~~~~~~~~~l~~ 336 (369)
.+++.+++ |+.= =|+| +..|++++|+| +++++ +.+ .+.. . | .|+.++. .+.+.+.+
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G----~~~~---l-~~~allVnP-----~D~~~lA~ 435 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG----AGQS---L-GAGALLVNP-----WNITEVSS 435 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcC----chhh---h-cCCeEEECC-----CCHHHHHH
Confidence 67888988 7743 4776 77899999999 44444 332 1111 2 3 5788884 48999999
Q ss_pred HHHHHhcC
Q 048393 337 CINEILEG 344 (369)
Q Consensus 337 ~i~~~l~~ 344 (369)
+|.++|+.
T Consensus 436 AI~~aL~m 443 (797)
T PLN03063 436 AIKEALNM 443 (797)
T ss_pred HHHHHHhC
Confidence 99999983
No 153
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=74.28 E-value=8.2 Score=31.77 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=21.6
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecCC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMPQ 300 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P~ 300 (369)
.+++++|.|.| .+.||...++|+|++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 34478887766 56788889999999863
No 154
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=72.12 E-value=81 Score=29.01 Aligned_cols=131 Identities=11% Similarity=0.079 Sum_probs=77.0
Q ss_pred eEEEEeCccccCCHHHHHHHHHHH---HhCCCcEEEEEeCCcc-CCCCcchh----cccC-CCcEE-EeccChH---Hhh
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGL---KASDKYFLWVVRESEQ-SKLPENFS----DETS-QKGLV-VNWCPQL---GVL 268 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l---~~~~~~~i~~~~~~~~-~~~~~~~~----~~~~-~~~~~-~~~~p~~---~iL 268 (369)
.+-|-.|..+..+-+.++ +++++ ...+.+++.-.+-+.. ....+.+. +..+ +++.+ .+++|-. ++|
T Consensus 146 ~~tIlvGNSgd~SN~Hie-~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL 224 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIE-ALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALL 224 (322)
T ss_pred ceEEEEeCCCCCcccHHH-HHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHH
Confidence 455556666644433333 23333 2345677766554211 11111111 1112 45654 4677744 799
Q ss_pred cccCcCceeec--CChhhHHHHHhhCCceeecCCC-CChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHh
Q 048393 269 AHEATGCFLTH--CGWNSTMEALGLGVPMLAMPQW-SDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEIL 342 (369)
Q Consensus 269 ~~~~~~~~I~h--gG~~s~~eal~~GvP~i~~P~~-~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l 342 (369)
+.+|++.|+++ -|.|+++-.++.|||+++--.. .-|.. .+. |+-+....+ .++...+.++=+++.
T Consensus 225 ~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~n~fwqdl-----~e~-gv~Vlf~~d---~L~~~~v~e~~rql~ 292 (322)
T PRK02797 225 RQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRDNPFWQDL-----TEQ-GLPVLFTGD---DLDEDIVREAQRQLA 292 (322)
T ss_pred HhCCEEEEeechhhHHhHHHHHHHCCCcEEEecCCchHHHH-----HhC-CCeEEecCC---cccHHHHHHHHHHHH
Confidence 99999988885 5889999999999999986432 22333 334 777655655 788888877755544
No 155
>PLN02470 acetolactate synthase
Probab=71.20 E-value=9.8 Score=38.50 Aligned_cols=92 Identities=15% Similarity=0.102 Sum_probs=51.3
Q ss_pred EeCccccCCHH--HHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEe--------ccChHHhhcccCcCc
Q 048393 206 SFGSMATLKME--QMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN--------WCPQLGVLAHEATGC 275 (369)
Q Consensus 206 s~Gs~~~~~~~--~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~p~~~iL~~~~~~~ 275 (369)
+|||....+.. .-+.+++.|++.|++.++-+.+.....+-+.+.. .+++..+. +.-.---...-.+++
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~~l~dal~~--~~~i~~i~~rhE~~A~~~Adgyar~tg~~gv 79 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASMEIHQALTR--SNCIRNVLCRHEQGEVFAAEGYAKASGKVGV 79 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccHHHHHHHhc--cCCceEEEeccHHHHHHHHHHHHHHhCCCEE
Confidence 35666543332 2566778888888888877765532222112110 11232221 111110112224555
Q ss_pred eeecCChh------hHHHHHhhCCceeecC
Q 048393 276 FLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 276 ~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++|.|.| .+.+|...++|||++.
T Consensus 80 ~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 80 CIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred EEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 99999887 6788999999999985
No 156
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=70.87 E-value=22 Score=32.88 Aligned_cols=96 Identities=13% Similarity=0.093 Sum_probs=59.7
Q ss_pred CCceEEEEeCcc-c---cCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcE-EEe--ccChH-Hhhcc
Q 048393 199 NGSVVYVSFGSM-A---TLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGL-VVN--WCPQL-GVLAH 270 (369)
Q Consensus 199 ~~~~i~vs~Gs~-~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~p~~-~iL~~ 270 (369)
.++.|.+..|+. . ..+.+.+.++++.+.+.+.+++.. |+.+.....+.+.+..+.++. +.+ -+.+. .++++
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~~ 251 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLIAL 251 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHHHh
Confidence 467888888874 2 357788889998887767776654 443221111222222222221 222 23444 78999
Q ss_pred cCcCceeecCChhhHHHHHhhCCceeec
Q 048393 271 EATGCFLTHCGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 271 ~~~~~~I~hgG~~s~~eal~~GvP~i~~ 298 (369)
+++ ||+- ..|-+.=|.+.|+|+|++
T Consensus 252 a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 252 AKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred CCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 998 9986 456777788999999854
No 157
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=70.48 E-value=10 Score=34.11 Aligned_cols=95 Identities=21% Similarity=0.218 Sum_probs=58.2
Q ss_pred CceEEEEeCccc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhccc-CCCc-EEEec--cChH-Hhhccc
Q 048393 200 GSVVYVSFGSMA---TLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDET-SQKG-LVVNW--CPQL-GVLAHE 271 (369)
Q Consensus 200 ~~~i~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~--~p~~-~iL~~~ 271 (369)
++.|.+..|+.. ..+.+.+.++++.+.+.++++++..+..+. .....+.+.. ..++ .+.+- +.+. .+++++
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~-~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~ 199 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAER-ELAEEIAAALGGPRVVNLAGKTSLRELAALLARA 199 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhH-HHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhC
Confidence 457888887764 356788999999888778888766443321 1111111111 1121 12222 2333 788999
Q ss_pred CcCceeecCChhhHHHHHhhCCceeec
Q 048393 272 ATGCFLTHCGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 272 ~~~~~I~hgG~~s~~eal~~GvP~i~~ 298 (369)
++ +|+.-. |.+.=|.+.|+|+|++
T Consensus 200 ~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 200 DL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred CE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 99 999853 5666667889999864
No 158
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=69.61 E-value=8.9 Score=34.46 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=23.3
Q ss_pred ccCcCceeecCChhhHHHHHh------hCCceeecC
Q 048393 270 HEATGCFLTHCGWNSTMEALG------LGVPMLAMP 299 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~------~GvP~i~~P 299 (369)
.+++ +|+-||=||++.|+. .++|++++-
T Consensus 35 ~~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN 68 (265)
T PRK04885 35 NPDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVH 68 (265)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEe
Confidence 3455 999999999999976 488988875
No 159
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=69.41 E-value=43 Score=27.53 Aligned_cols=26 Identities=27% Similarity=0.322 Sum_probs=21.7
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.++++|.|.| .+.+|...++|+|++.
T Consensus 65 ~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 65 GVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred EEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3488888876 6788899999999986
No 160
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=69.26 E-value=20 Score=33.33 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=61.2
Q ss_pred CCceEEEEeCccc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCc-cCCCCcchhcccC-CCcE-EEe--ccChH-Hhhc
Q 048393 199 NGSVVYVSFGSMA---TLKMEQMEELAWGLKASDKYFLWVVRESE-QSKLPENFSDETS-QKGL-VVN--WCPQL-GVLA 269 (369)
Q Consensus 199 ~~~~i~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~-~~~~-~~~--~~p~~-~iL~ 269 (369)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++.-+..+ ....-+.+.+... .++. +.+ .+.+. .+++
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 259 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALID 259 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHH
Confidence 4567888888764 35677888999888776788776643221 1111111211111 1121 233 23445 7899
Q ss_pred ccCcCceeecCChhhHHHHHhhCCceeec
Q 048393 270 HEATGCFLTHCGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~~GvP~i~~ 298 (369)
++++ ||+. ..|-+.=|.+.|+|.|++
T Consensus 260 ~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 260 HARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred hCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 9999 9998 678888899999999964
No 161
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=68.10 E-value=78 Score=31.24 Aligned_cols=89 Identities=12% Similarity=0.028 Sum_probs=56.5
Q ss_pred EEEeccChH---HhhcccCcCceee---cCChhhH-HHHHhhCC----ceeecCCCCChhHHHHHHHhhcCceEEecCCC
Q 048393 257 LVVNWCPQL---GVLAHEATGCFLT---HCGWNST-MEALGLGV----PMLAMPQWSDQSTNAKYIMDVGKMGLKVPADE 325 (369)
Q Consensus 257 ~~~~~~p~~---~iL~~~~~~~~I~---hgG~~s~-~eal~~Gv----P~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 325 (369)
.+.+.+|+. .+++.+|+ ++. .-|+|-+ .|.++++. |+|+--+.+= | +.+ .-++.++.
T Consensus 365 ~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGa----a---~~l-~~AllVNP-- 432 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGA----A---VEL-KGALLTNP-- 432 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEeccccc----h---hhc-CCCEEECC--
Confidence 455677766 46778887 554 4588844 59999987 5555444332 1 334 55788874
Q ss_pred CCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 048393 326 KGIVRREAIAHCINEILEGERGKEIKQNADKWRNFA 361 (369)
Q Consensus 326 ~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~ 361 (369)
.+.+++.++|.+.|+.+.. +-+++.+++.+.+
T Consensus 433 ---~d~~~~A~ai~~AL~m~~~-Er~~R~~~l~~~v 464 (487)
T TIGR02398 433 ---YDPVRMDETIYVALAMPKA-EQQARMREMFDAV 464 (487)
T ss_pred ---CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHH
Confidence 5899999999999987632 2234444444433
No 162
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=67.90 E-value=9 Score=33.65 Aligned_cols=97 Identities=14% Similarity=0.140 Sum_probs=53.1
Q ss_pred CCceEEEEeCccc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCcc-CCCCcchhcccCCC-cEEEec--cChH-Hhhcc
Q 048393 199 NGSVVYVSFGSMA---TLKMEQMEELAWGLKASDKYFLWVVRESEQ-SKLPENFSDETSQK-GLVVNW--CPQL-GVLAH 270 (369)
Q Consensus 199 ~~~~i~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~--~p~~-~iL~~ 270 (369)
+++.|.+..|+.. ..+.+.+.++++.|.+.++.++...+..+. ......+......+ +.+.+- +.+. .++.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~ 183 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISR 183 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhc
Confidence 4567888888765 356788999999998877666544433321 11111111111112 223222 3333 78899
Q ss_pred cCcCceeecCChhhHHHHHhhCCceeec
Q 048393 271 EATGCFLTHCGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 271 ~~~~~~I~hgG~~s~~eal~~GvP~i~~ 298 (369)
+++ +|+-- .|.+.=|.+.|+|+|++
T Consensus 184 a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 184 ADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp SSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred CCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 998 88874 57788888999999987
No 163
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=67.07 E-value=16 Score=30.14 Aligned_cols=27 Identities=26% Similarity=0.384 Sum_probs=21.8
Q ss_pred CceeecCChh------hHHHHHhhCCceeecCC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMPQ 300 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P~ 300 (369)
+++++|+|.| .+.||...++|||++.-
T Consensus 62 gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 62 VAVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred EEEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 3388888876 66799999999999853
No 164
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=67.02 E-value=12 Score=34.14 Aligned_cols=58 Identities=9% Similarity=0.144 Sum_probs=38.1
Q ss_pred HhhcccCcCceeecCChhhHHHHHh----hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHH
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALG----LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEI 341 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~ 341 (369)
++...+++ +|+-||=||++.++. .++|++++-.. .+|... .++.+++.+++.++
T Consensus 60 ~~~~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFLt------~~~~~~~~~~l~~i 117 (287)
T PRK14077 60 ELFKISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGFLT------DITVDEAEKFFQAF 117 (287)
T ss_pred hcccCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------CcccCC------cCCHHHHHHHHHHH
Confidence 33345667 999999999998866 47898887421 112211 35667777777777
Q ss_pred hcCC
Q 048393 342 LEGE 345 (369)
Q Consensus 342 l~~~ 345 (369)
++++
T Consensus 118 ~~g~ 121 (287)
T PRK14077 118 FQGE 121 (287)
T ss_pred HcCC
Confidence 6653
No 165
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=66.76 E-value=19 Score=31.76 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=23.6
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
-|| ++|.|+.. --|..=|.++|||+|++.-+.
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn 189 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTN 189 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCC
Confidence 388 56677776 335556999999999986655
No 166
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=65.11 E-value=26 Score=28.21 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=20.2
Q ss_pred ceeecCChh------hHHHHHhhCCceeecCC
Q 048393 275 CFLTHCGWN------STMEALGLGVPMLAMPQ 300 (369)
Q Consensus 275 ~~I~hgG~~------s~~eal~~GvP~i~~P~ 300 (369)
++++|+|.| .+.+|...++|+|++.-
T Consensus 62 v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 62 VVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 388886654 67788889999998853
No 167
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=64.76 E-value=3.2 Score=32.74 Aligned_cols=32 Identities=25% Similarity=0.183 Sum_probs=26.5
Q ss_pred CCCEEEECCCcchHHHHHHHhCCCcEEEcccc
Q 048393 34 DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~ 65 (369)
..|+++.+.....+..+||++|||.+.....+
T Consensus 100 ~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 100 ADDVIIAAPLAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp ECCEECHHHHHTHHHHHHHHHTS-EEEEESSG
T ss_pred cchHHHhhhhcCccceeEhhhCchHHHHhhCC
Confidence 57788888888889999999999999977665
No 168
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=63.89 E-value=23 Score=32.56 Aligned_cols=132 Identities=12% Similarity=0.045 Sum_probs=74.4
Q ss_pred CceEEEEeCc-cc--cCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEe--ccChH-HhhcccCc
Q 048393 200 GSVVYVSFGS-MA--TLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN--WCPQL-GVLAHEAT 273 (369)
Q Consensus 200 ~~~i~vs~Gs-~~--~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~-~iL~~~~~ 273 (369)
++.|.+..|+ .. ..+.+.+.++++.+.+.+.++++..|+.......+.+.+.. .++.+.+ .+.+. .+++++++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~~-~~~~l~g~~sL~elaali~~a~l 256 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEGF-PYVEVLPKLSLEQVARVLAGAKA 256 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHccC-CcceecCCCCHHHHHHHHHhCCE
Confidence 3455444444 32 35778889999998776777765545432111111221111 2233333 34455 78999999
Q ss_pred CceeecCChhhHHHHHhhCCceeecCCCCChhH------HHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhc
Q 048393 274 GCFLTHCGWNSTMEALGLGVPMLAMPQWSDQST------NAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 274 ~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~------na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
||+-- .|.+.=|.+.|+|+|++=-..+... |...+. .++-.+ . +++.|++.++++++|+
T Consensus 257 --~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~---~~~~cm--~---~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 257 --VVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACR---SPGKSM--A---DLSAETVFQKLETLIS 321 (322)
T ss_pred --EEecC-CcHHHHHHHhCCCEEEEECCCCcccccCCCCCceeec---CCCccc--c---cCCHHHHHHHHHHHhh
Confidence 99864 5778888999999996421122111 111111 011111 1 7899999999988764
No 169
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=63.52 E-value=52 Score=26.95 Aligned_cols=99 Identities=12% Similarity=0.146 Sum_probs=52.7
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEec-cChH
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNW-CPQL 265 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~ 265 (369)
..++-+++.+. ...+++.|..+ ...+..++..+.+-.++-+++.... ..+. ........++ .+..
T Consensus 20 A~~lg~~La~~---g~~lv~Gg~~G-----lM~a~a~ga~~~gg~viGVlp~~l~---~~~~---~~~~~i~~~~~~~Rk 85 (159)
T TIGR00725 20 AYRLGKELAKK---GHILINGGRTG-----VMEAVSKGAREAGGLVVGILPDEDF---AGNP---YLTIKVKTGMNFARN 85 (159)
T ss_pred HHHHHHHHHHC---CCEEEcCCchh-----HHHHHHHHHHHCCCeEEEECChhhc---cCCC---CceEEEECCCcchHH
Confidence 55667777654 25667655443 3444555555556555544433210 1110 0011122333 3444
Q ss_pred H-hhcccCcCceeecCChhhHHHH---HhhCCceeecCC
Q 048393 266 G-VLAHEATGCFLTHCGWNSTMEA---LGLGVPMLAMPQ 300 (369)
Q Consensus 266 ~-iL~~~~~~~~I~hgG~~s~~ea---l~~GvP~i~~P~ 300 (369)
. +...++. .++--||.||+.|+ +.+++|+++++.
T Consensus 86 ~~m~~~sda-~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 86 FILVRSADV-VVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred HHHHHHCCE-EEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 4 4445554 34446888887765 678999999885
No 170
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=62.93 E-value=15 Score=33.54 Aligned_cols=58 Identities=19% Similarity=0.372 Sum_probs=40.3
Q ss_pred HhhcccCcCceeecCChhhHHHHHh----hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHH
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALG----LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEI 341 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~ 341 (369)
.+...+++ +|+=||=||++.++. +++|++++-+. .+|..- .++.+++.+++.++
T Consensus 60 ~~~~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFLt------~~~~~~~~~~l~~i 117 (292)
T PRK01911 60 ELDGSADM--VISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGFLA------TVSKEEIEETIDEL 117 (292)
T ss_pred hcccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCccc------ccCHHHHHHHHHHH
Confidence 33345666 999999999999977 47898887431 122221 35678888888888
Q ss_pred hcCC
Q 048393 342 LEGE 345 (369)
Q Consensus 342 l~~~ 345 (369)
++++
T Consensus 118 ~~g~ 121 (292)
T PRK01911 118 LNGD 121 (292)
T ss_pred HcCC
Confidence 8764
No 171
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=62.67 E-value=34 Score=32.02 Aligned_cols=97 Identities=9% Similarity=0.149 Sum_probs=60.6
Q ss_pred CCceEEEEeCccc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCccC-CCCcchhccc-CCC-cEEEec--cChH-Hhhc
Q 048393 199 NGSVVYVSFGSMA---TLKMEQMEELAWGLKASDKYFLWVVRESEQS-KLPENFSDET-SQK-GLVVNW--CPQL-GVLA 269 (369)
Q Consensus 199 ~~~~i~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~-~~~-~~~~~~--~p~~-~iL~ 269 (369)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++.-+..+.+ .....+.+.. ..+ +-+.+- +.+. .+++
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 261 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID 261 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence 3467888888864 3567888899999987788877664433211 1111121111 111 222332 3444 7899
Q ss_pred ccCcCceeecCChhhHHHHHhhCCceeec
Q 048393 270 HEATGCFLTHCGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~~GvP~i~~ 298 (369)
++++ ||+. ..|-+.=|.+.|+|.|++
T Consensus 262 ~a~l--~v~n-DSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 262 HAQL--FIGV-DSAPAHIAAAVNTPLICL 287 (352)
T ss_pred hCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 9999 9987 457777788899999864
No 172
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=61.70 E-value=40 Score=31.44 Aligned_cols=96 Identities=13% Similarity=0.041 Sum_probs=59.1
Q ss_pred CCceEEEEeCccc----cCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccC----CCc-EEEec--cChH-H
Q 048393 199 NGSVVYVSFGSMA----TLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETS----QKG-LVVNW--CPQL-G 266 (369)
Q Consensus 199 ~~~~i~vs~Gs~~----~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~--~p~~-~ 266 (369)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.+++.. ++.........+.+... .++ -+.+- +.+. .
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~a 257 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVI 257 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHH
Confidence 5668888888752 356788899998887667777654 43321111112211111 111 12232 3444 7
Q ss_pred hhcccCcCceeecCChhhHHHHHhhCCceeec
Q 048393 267 VLAHEATGCFLTHCGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 267 iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~ 298 (369)
+++++++ ||+- ..|-+.=|.+.|+|+|++
T Consensus 258 li~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 258 LIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 8999998 8885 567777888999999853
No 173
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=60.99 E-value=17 Score=33.48 Aligned_cols=55 Identities=16% Similarity=0.309 Sum_probs=37.3
Q ss_pred cccCcCceeecCChhhHHHHHhh----CCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 269 AHEATGCFLTHCGWNSTMEALGL----GVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
..+++ +|+=||=||++.+... ++|++++-.. .+|... .++.+++.+++.+++++
T Consensus 67 ~~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~G--------------~lGFLt------~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 67 SSMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINTG--------------HLGFLT------EAYLNQLDEAIDQVLAG 124 (305)
T ss_pred cCcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeCC--------------CCcccc------cCCHHHHHHHHHHHHcC
Confidence 34566 9999999999999774 7899988431 122111 34567777777777765
Q ss_pred C
Q 048393 345 E 345 (369)
Q Consensus 345 ~ 345 (369)
+
T Consensus 125 ~ 125 (305)
T PRK02649 125 Q 125 (305)
T ss_pred C
Confidence 4
No 174
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=60.63 E-value=1e+02 Score=25.91 Aligned_cols=51 Identities=22% Similarity=0.315 Sum_probs=30.6
Q ss_pred CCceeecCCC----CCh---hHHHHHHHhhcCceEEecCC------C--CC-CcCHHHHHHHHHHHhc
Q 048393 292 GVPMLAMPQW----SDQ---STNAKYIMDVGKMGLKVPAD------E--KG-IVRREAIAHCINEILE 343 (369)
Q Consensus 292 GvP~i~~P~~----~dQ---~~na~~~~~~~g~g~~~~~~------~--~~-~~~~~~l~~~i~~~l~ 343 (369)
++|++++|-. ... ..|..++.+. |+=+.-... + .+ --+.++|.+.+.+.+.
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~-G~~vi~p~~g~la~~~~g~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKED-GVQEIEPKEGLLACGDEGYGALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHC-CCEEECCCCCccccCCccCCCCCCHHHHHHHHHHHhc
Confidence 8999999952 222 4567777777 654443331 0 11 3456777777766654
No 175
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=60.56 E-value=29 Score=32.29 Aligned_cols=95 Identities=17% Similarity=0.205 Sum_probs=59.0
Q ss_pred CceEEEEeC-ccc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEe--ccChH-HhhcccC
Q 048393 200 GSVVYVSFG-SMA---TLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN--WCPQL-GVLAHEA 272 (369)
Q Consensus 200 ~~~i~vs~G-s~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~-~iL~~~~ 272 (369)
++.|.++.| |.+ ..+.+.+.++++.+.+.+..++ .+++.+.....+.+.+.......+.+ -+.+. .++++++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vv-l~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~ 253 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVV-LFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGAD 253 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEE-EecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCC
Confidence 578999999 443 4678899999999998885554 44443222222222222222222443 33444 6778888
Q ss_pred cCceeecCChhhHHHHHhhCCceeec
Q 048393 273 TGCFLTHCGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 273 ~~~~I~hgG~~s~~eal~~GvP~i~~ 298 (369)
+ ||+- ..|-+.=|.+.|+|.|++
T Consensus 254 l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 254 L--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred E--EEcc-CChHHHHHHHcCCCEEEE
Confidence 8 7764 456666778889999964
No 176
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=59.66 E-value=61 Score=29.65 Aligned_cols=54 Identities=20% Similarity=0.326 Sum_probs=38.9
Q ss_pred ccCcCceeecCChhhHHHHHh----hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 270 HEATGCFLTHCGWNSTMEALG----LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
.+++ +|+=||=||+.+++. .++|++++... .+|.. . .++.+++.++|.++++++
T Consensus 62 ~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl-~-----~~~~~~~~~~l~~~~~g~ 119 (295)
T PRK01231 62 VCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFL-T-----DIRPDELEFKLAEVLDGH 119 (295)
T ss_pred CCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------ccccc-c-----cCCHHHHHHHHHHHHcCC
Confidence 4566 999999999999975 37788887641 12322 1 457788888888888654
No 177
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=58.56 E-value=18 Score=33.08 Aligned_cols=58 Identities=17% Similarity=0.213 Sum_probs=38.7
Q ss_pred HhhcccCcCceeecCChhhHHHHHh----hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHH
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALG----LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEI 341 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~ 341 (369)
++...+++ +|+=||=||++.|.. .++|++++=.. .+|... .++.+++.+++.++
T Consensus 64 ~~~~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~------~~~~~~~~~~l~~i 121 (296)
T PRK04539 64 ELGQYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT------QIPREYMTDKLLPV 121 (296)
T ss_pred hcCcCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee------ccCHHHHHHHHHHH
Confidence 33345666 999999999999975 47899887431 123222 35667777777777
Q ss_pred hcCC
Q 048393 342 LEGE 345 (369)
Q Consensus 342 l~~~ 345 (369)
++++
T Consensus 122 ~~g~ 125 (296)
T PRK04539 122 LEGK 125 (296)
T ss_pred HcCC
Confidence 7553
No 178
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=57.94 E-value=14 Score=30.87 Aligned_cols=69 Identities=13% Similarity=0.191 Sum_probs=39.2
Q ss_pred cccCcCceeecCChhhHHHHHhhCCceeecCCCC-----------------------ChhHHHHHHHhhcCceEEecCCC
Q 048393 269 AHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWS-----------------------DQSTNAKYIMDVGKMGLKVPADE 325 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~-----------------------dQ~~na~~~~~~~g~g~~~~~~~ 325 (369)
.+...+++|++||...+..... ++|+|-+|..+ .....+..+++.+|+-+..-.-
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~- 108 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPY- 108 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEE-
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEE-
Confidence 4455566999999998888877 99999998742 2233355555554444433321
Q ss_pred CCCcCHHHHHHHHHHHh
Q 048393 326 KGIVRREAIAHCINEIL 342 (369)
Q Consensus 326 ~~~~~~~~l~~~i~~~l 342 (369)
-+.+++...|.++.
T Consensus 109 ---~~~~e~~~~i~~~~ 122 (176)
T PF06506_consen 109 ---DSEEEIEAAIKQAK 122 (176)
T ss_dssp ---SSHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHH
Confidence 25666777776664
No 179
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=56.92 E-value=15 Score=30.66 Aligned_cols=104 Identities=18% Similarity=0.249 Sum_probs=64.3
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+..+.+|.++ +++++.++..+.+|+..-+...... ... -....+.+..++|+.+|+ ++-
T Consensus 36 g~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~~~~~---~~~------~~~~~~~~l~ell~~aDi--v~~ 97 (178)
T PF02826_consen 36 GKTVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSPKPEE---GAD------EFGVEYVSLDELLAQADI--VSL 97 (178)
T ss_dssp TSEEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSCHHHH---HHH------HTTEEESSHHHHHHH-SE--EEE
T ss_pred CCEEEEEEEcCCc-------CeEeeeeecCCceeEEecccCChhh---hcc------cccceeeehhhhcchhhh--hhh
Confidence 4558888999887 5667777778888775544332110 000 012256677899999998 887
Q ss_pred cCChhhHHHHHhhCCceeecCCC--CChhHHHHHHHhhcCce-EEecCCCCCCcCHHHHHHHHH
Q 048393 279 HCGWNSTMEALGLGVPMLAMPQW--SDQSTNAKYIMDVGKMG-LKVPADEKGIVRREAIAHCIN 339 (369)
Q Consensus 279 hgG~~s~~eal~~GvP~i~~P~~--~dQ~~na~~~~~~~g~g-~~~~~~~~~~~~~~~l~~~i~ 339 (369)
|+ |.. ..+..|++.++.. .-| +.++....+.++.+.|.++++
T Consensus 98 ~~------------------plt~~T~~li~~~~l~~m-k~ga~lvN~aRG~~vde~aL~~aL~ 142 (178)
T PF02826_consen 98 HL------------------PLTPETRGLINAEFLAKM-KPGAVLVNVARGELVDEDALLDALE 142 (178)
T ss_dssp -S------------------SSSTTTTTSBSHHHHHTS-TTTEEEEESSSGGGB-HHHHHHHHH
T ss_pred hh------------------ccccccceeeeeeeeecc-ccceEEEeccchhhhhhhHHHHHHh
Confidence 76 543 4678899999988 755 555544222577777777775
No 180
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=56.68 E-value=11 Score=28.74 Aligned_cols=92 Identities=11% Similarity=0.059 Sum_probs=50.0
Q ss_pred EEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEe--ccChHHhhcccCcCceeecC
Q 048393 203 VYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN--WCPQLGVLAHEATGCFLTHC 280 (369)
Q Consensus 203 i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~iL~~~~~~~~I~hg 280 (369)
||++..-.........+++.+.|++.+..+..-......... .. ..... |--....+..+++.+++-.+
T Consensus 1 IYlAgp~F~~~~~~~~~~~~~~L~~~g~~v~~P~~~~~~~~~-~~--------~~~~~~i~~~d~~~i~~~D~via~l~~ 71 (113)
T PF05014_consen 1 IYLAGPFFSEEQKARVERLREALEKNGFEVYSPQDNDENDEE-DS--------QEWAREIFERDLEGIRECDIVIANLDG 71 (113)
T ss_dssp EEEESGGSSHHHHHHHHHHHHHHHTTTTEEEGGCTCSSS--T-TS--------HHCHHHHHHHHHHHHHHSSEEEEEECS
T ss_pred CEEeCCcCCHHHHHHHHHHHHHHHhCCCEEEecccccccccc-cc--------chHHHHHHHHHHHHHHHCCEEEEECCC
Confidence 566544422222344677888898888855411100000000 00 00111 11234677888887666666
Q ss_pred ---ChhhHHHH---HhhCCceeecCCCCC
Q 048393 281 ---GWNSTMEA---LGLGVPMLAMPQWSD 303 (369)
Q Consensus 281 ---G~~s~~ea---l~~GvP~i~~P~~~d 303 (369)
+.||..|. .+.|+|++++-....
T Consensus 72 ~~~d~Gt~~ElG~A~algkpv~~~~~d~~ 100 (113)
T PF05014_consen 72 FRPDSGTAFELGYAYALGKPVILLTEDDR 100 (113)
T ss_dssp SS--HHHHHHHHHHHHTTSEEEEEECCCC
T ss_pred CCCCCcHHHHHHHHHHCCCEEEEEEcCCc
Confidence 89999997 567999998765433
No 181
>PRK12342 hypothetical protein; Provisional
Probab=56.59 E-value=24 Score=31.43 Aligned_cols=41 Identities=10% Similarity=0.191 Sum_probs=30.2
Q ss_pred HHHHHHHHhcCCCCEEEECCCc-c-----hHHHHHHHhCCCcEEEccc
Q 048393 23 QTFTELVERMNDVDCIVYDSFL-P-----WALDVAKKFGLTGAAFLTQ 64 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~-~-----~~~~~A~~lgiP~v~~~~~ 64 (369)
..+.+.++.. .||+|++-... . -+..+|+.||+|++.+...
T Consensus 99 ~~La~~i~~~-~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 99 KALAAAIEKI-GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred HHHHHHHHHh-CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 3455566666 79999986554 2 3788999999999986543
No 182
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=56.46 E-value=20 Score=32.65 Aligned_cols=58 Identities=10% Similarity=0.202 Sum_probs=39.3
Q ss_pred HhhcccCcCceeecCChhhHHHHHh----hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHH
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALG----LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEI 341 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~ 341 (369)
++...+++ +|+=||=||+..++. +++|++.+-.. .+|..- .++.+++.+++.++
T Consensus 59 ~~~~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G--------------~lGFl~------~~~~~~~~~~l~~i 116 (292)
T PRK03378 59 EIGQQADL--AIVVGGDGNMLGAARVLARYDIKVIGINRG--------------NLGFLT------DLDPDNALQQLSDV 116 (292)
T ss_pred hcCCCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECC--------------CCCccc------ccCHHHHHHHHHHH
Confidence 33345666 999999999999975 37788877431 112221 35677888888888
Q ss_pred hcCC
Q 048393 342 LEGE 345 (369)
Q Consensus 342 l~~~ 345 (369)
+++.
T Consensus 117 ~~g~ 120 (292)
T PRK03378 117 LEGH 120 (292)
T ss_pred HcCC
Confidence 7654
No 183
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=56.43 E-value=54 Score=30.73 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=53.0
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCcc--CCCCc-chhcc-cCC-Cc----EE----------Eec
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQ--SKLPE-NFSDE-TSQ-KG----LV----------VNW 261 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~--~~~~~-~~~~~-~~~-~~----~~----------~~~ 261 (369)
.+++.+.||-+...+. .++++.|++.++.+.|....... ..++. ++.-. .+. .+ .+ ..+
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKGV 80 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHHH
Confidence 3677777777653332 34566677778999988654321 11222 11100 000 00 00 000
Q ss_pred cChHHhhcccCcCceeecCChhh---HHHHHhhCCceeecCC
Q 048393 262 CPQLGVLAHEATGCFLTHCGWNS---TMEALGLGVPMLAMPQ 300 (369)
Q Consensus 262 ~p~~~iL~~~~~~~~I~hgG~~s---~~eal~~GvP~i~~P~ 300 (369)
.--..++..-+-+++|++||.-| +..|...|+|+++.-.
T Consensus 81 ~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~ 122 (352)
T PRK12446 81 MDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHES 122 (352)
T ss_pred HHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECC
Confidence 01113454333333999999997 8899999999987543
No 184
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=56.13 E-value=20 Score=33.02 Aligned_cols=56 Identities=14% Similarity=0.221 Sum_probs=39.1
Q ss_pred hcccCcCceeecCChhhHHHHHh----hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhc
Q 048393 268 LAHEATGCFLTHCGWNSTMEALG----LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 268 L~~~~~~~~I~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
...+++ +|+=||=||++.|+. .++|++++... .+|... .+..+++.+++.++++
T Consensus 70 ~~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~------~~~~~~~~~~l~~i~~ 127 (306)
T PRK03372 70 ADGCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA------EAEAEDLDEAVERVVD 127 (306)
T ss_pred ccCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec------cCCHHHHHHHHHHHHc
Confidence 345666 999999999999976 48899988641 223332 3456777777777776
Q ss_pred CC
Q 048393 344 GE 345 (369)
Q Consensus 344 ~~ 345 (369)
++
T Consensus 128 g~ 129 (306)
T PRK03372 128 RD 129 (306)
T ss_pred CC
Confidence 54
No 185
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.65 E-value=65 Score=26.46 Aligned_cols=95 Identities=18% Similarity=0.173 Sum_probs=58.7
Q ss_pred hHH-hhcccCcCceeecCC---hhhHHHHHhhCCceeecC-CCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHH
Q 048393 264 QLG-VLAHEATGCFLTHCG---WNSTMEALGLGVPMLAMP-QWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCI 338 (369)
Q Consensus 264 ~~~-iL~~~~~~~~I~hgG---~~s~~eal~~GvP~i~~P-~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i 338 (369)
|.. |-+||++.+-+--.| .-|..|--.+|.=-+--- +.-=+..|+.+.++. |.-.++-.. ..|.++|..+.
T Consensus 65 rl~liraHPdLAgk~a~a~elta~S~~EQasAGLd~Ls~~E~a~f~~LN~aY~~rF-gfPfI~aVk---g~~k~~Il~a~ 140 (176)
T COG3195 65 RLALIRAHPDLAGKAAIAGELTAESTSEQASAGLDRLSPEEFARFTELNAAYVERF-GFPFIIAVK---GNTKDTILAAF 140 (176)
T ss_pred HHHHHHhChhhHHHHHHHHHhhhhhHHHHHhcCcccCCHHHHHHHHHHHHHHHHhc-CCceEEeec---CCCHHHHHHHH
Confidence 443 335777732222222 235566666665433100 001156799999999 998777655 56899999888
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHH
Q 048393 339 NEILEGERGKEIKQNADKWRNFAK 362 (369)
Q Consensus 339 ~~~l~~~~~~~~~~~a~~l~~~~~ 362 (369)
.+=|.|.+..++++.+.++.+..+
T Consensus 141 ~~Rl~n~~e~E~~tAl~eI~rIA~ 164 (176)
T COG3195 141 ERRLDNDREQEFATALAEIERIAL 164 (176)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHH
Confidence 888887766678887777766544
No 186
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=55.43 E-value=27 Score=31.21 Aligned_cols=42 Identities=10% Similarity=0.096 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCCCEEEECCCc------chHHHHHHHhCCCcEEEccc
Q 048393 22 LQTFTELVERMNDVDCIVYDSFL------PWALDVAKKFGLTGAAFLTQ 64 (369)
Q Consensus 22 ~~~l~~ll~~~~~~D~vI~D~~~------~~~~~~A~~lgiP~v~~~~~ 64 (369)
...+.+.++.. .||+|++-... .-+..+|+.||+|++.+...
T Consensus 101 A~~La~ai~~~-~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 101 ASALAAAAQKA-GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred HHHHHHHHHHh-CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 34555666666 79999985543 34778999999999986553
No 187
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=52.13 E-value=25 Score=31.65 Aligned_cols=54 Identities=17% Similarity=0.332 Sum_probs=37.5
Q ss_pred ccCcCceeecCChhhHHHHHh-hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 270 HEATGCFLTHCGWNSTMEALG-LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~-~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
.+++ +|+=||=||++.++. +..|++++-.. .+|..- .++.+++.+++.++++++
T Consensus 52 ~~D~--vi~lGGDGT~L~a~~~~~~PilGIN~G--------------~lGFL~------~~~~~~~~~~l~~i~~g~ 106 (271)
T PRK01185 52 NADV--IITIGGDGTILRTLQRAKGPILGINMG--------------GLGFLT------EIEIDEVGSAIKKLIRGE 106 (271)
T ss_pred CCCE--EEEEcCcHHHHHHHHHcCCCEEEEECC--------------CCccCc------ccCHHHHHHHHHHHHcCC
Confidence 4566 999999999999987 45677766321 122221 357788888888888764
No 188
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=51.18 E-value=33 Score=29.07 Aligned_cols=44 Identities=11% Similarity=-0.081 Sum_probs=30.1
Q ss_pred HHcHHHHHHHHHhcCCCCEEEECCCc--chHHHHHHHhCCCcEEEcc
Q 048393 19 KIGLQTFTELVERMNDVDCIVYDSFL--PWALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 19 ~~~~~~l~~ll~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~~ 63 (369)
+.....+.+.++.. ++|+|+.=... +.|..+|..+|+|++...-
T Consensus 36 ~~i~~~la~~~~~~-~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK 81 (189)
T PRK09219 36 NEIGKEFARRFKDE-GITKILTIEASGIAPAVMAALALGVPVVFAKK 81 (189)
T ss_pred HHHHHHHHHHhccC-CCCEEEEEccccHHHHHHHHHHHCCCEEEEEE
Confidence 33344444444444 79998875443 7788899999999988643
No 189
>PRK08322 acetolactate synthase; Reviewed
Probab=50.64 E-value=34 Score=34.24 Aligned_cols=27 Identities=30% Similarity=0.347 Sum_probs=22.1
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|...++|+|++.
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 34489888876 7789999999999885
No 190
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=50.31 E-value=12 Score=36.61 Aligned_cols=54 Identities=17% Similarity=0.272 Sum_probs=37.1
Q ss_pred hHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 284 STMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 284 s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
++.||+++|+|+++.=- ---++-++.. -.|..++.. .-....+.+++.++..|+
T Consensus 381 v~IEAMa~glPvvAt~~----GGP~EiV~~~-~tG~l~dp~---~e~~~~~a~~~~kl~~~p 434 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATNN----GGPAEIVVHG-VTGLLIDPG---QEAVAELADALLKLRRDP 434 (495)
T ss_pred eeHHHHhcCCCEEEecC----CCceEEEEcC-CcceeeCCc---hHHHHHHHHHHHHHhcCH
Confidence 78999999999998632 2223334444 456666643 223347999999999998
No 191
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=50.22 E-value=57 Score=31.56 Aligned_cols=26 Identities=23% Similarity=0.371 Sum_probs=21.4
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.||...++|+|++-
T Consensus 65 gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 96 (432)
T TIGR00173 65 VAVVCTSGTAVANLLPAVIEASYSGVPLIVLT 96 (432)
T ss_pred EEEEECCcchHhhhhHHHHHhcccCCcEEEEe
Confidence 3488988876 6778999999999983
No 192
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=49.96 E-value=32 Score=30.92 Aligned_cols=54 Identities=11% Similarity=0.150 Sum_probs=36.9
Q ss_pred cCcCceeecCChhhHHHHHhh-----CCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 271 EATGCFLTHCGWNSTMEALGL-----GVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 271 ~~~~~~I~hgG~~s~~eal~~-----GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+++ +|+=||=||++.|+.. .+|++++-..+ .+|..- .++.+++.+++.++++++
T Consensus 40 ~D~--vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G-------------~lGFL~------~~~~~~~~~~l~~i~~g~ 98 (264)
T PRK03501 40 ANI--IVSIGGDGTFLQAVRKTGFREDCLYAGISTKD-------------QLGFYC------DFHIDDLDKMIQAITKEE 98 (264)
T ss_pred ccE--EEEECCcHHHHHHHHHhcccCCCeEEeEecCC-------------CCeEcc------cCCHHHHHHHHHHHHcCC
Confidence 455 9999999999999874 56776664311 123321 356788888888887654
No 193
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=49.84 E-value=31 Score=30.79 Aligned_cols=54 Identities=13% Similarity=0.254 Sum_probs=37.0
Q ss_pred ccCcCceeecCChhhHHHHHh-hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 270 HEATGCFLTHCGWNSTMEALG-LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~-~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
++++ +|+=||=||+..|+. +++|++++-.. .+|... .++.+++.+++.++++++
T Consensus 41 ~~d~--vi~iGGDGT~L~a~~~~~~Pilgin~G--------------~lGfl~------~~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 41 TADL--IIVVGGDGTVLKAAKKVGTPLVGFKAG--------------RLGFLS------SYTLEEIDRFLEDLKNWN 95 (256)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCEEEEeCC--------------CCcccc------ccCHHHHHHHHHHHHcCC
Confidence 4455 999999999999977 57888777421 112222 356677888888877654
No 194
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=49.31 E-value=85 Score=28.63 Aligned_cols=95 Identities=9% Similarity=-0.048 Sum_probs=55.0
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccC-CCCcchhcccCCCcEEEeccChH
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQS-KLPENFSDETSQKGLVVNWCPQL 265 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~ 265 (369)
.+++.+......-+++-+--.......+...+..+.++.++.+..+++-+|..... .+.. .......=..
T Consensus 115 ~~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~~~~---------~~~~p~~~~~ 185 (293)
T COG2159 115 AEELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGAGLEK---------GHSDPLYLDD 185 (293)
T ss_pred HHHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCccccc---------CCCCchHHHH
Confidence 45666666543333333323333334455668889999999999999877654211 1110 0011111122
Q ss_pred HhhcccCcCceeecCC--hhhHHHHHh
Q 048393 266 GVLAHEATGCFLTHCG--WNSTMEALG 290 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG--~~s~~eal~ 290 (369)
.....|++++++.|+| ..-..|++.
T Consensus 186 va~~fP~l~IVl~H~G~~~p~~~~a~~ 212 (293)
T COG2159 186 VARKFPELKIVLGHMGEDYPWELEAIE 212 (293)
T ss_pred HHHHCCCCcEEEEecCCCCchhHHHHH
Confidence 4456889999999999 777777733
No 195
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=48.90 E-value=32 Score=33.82 Aligned_cols=55 Identities=18% Similarity=0.310 Sum_probs=38.0
Q ss_pred cccCcCceeecCChhhHHHHHhh----CCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 269 AHEATGCFLTHCGWNSTMEALGL----GVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
..+++ +|+=||=||++.|... ++|++++-+. .+|... .++.+++.++|.+++++
T Consensus 261 ~~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGIN~G--------------~LGFLt------~i~~~e~~~~Le~il~G 318 (508)
T PLN02935 261 TKVDL--VITLGGDGTVLWAASMFKGPVPPVVPFSMG--------------SLGFMT------PFHSEQYRDCLDAILKG 318 (508)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeCC--------------Ccceec------ccCHHHHHHHHHHHHcC
Confidence 45666 9999999999999773 5788776311 134322 45677788888888765
Q ss_pred C
Q 048393 345 E 345 (369)
Q Consensus 345 ~ 345 (369)
+
T Consensus 319 ~ 319 (508)
T PLN02935 319 P 319 (508)
T ss_pred C
Confidence 4
No 196
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=48.77 E-value=38 Score=30.59 Aligned_cols=33 Identities=6% Similarity=0.104 Sum_probs=25.6
Q ss_pred HHhhcccCcCceeecCChhhHHHHHh----hCCceeecC
Q 048393 265 LGVLAHEATGCFLTHCGWNSTMEALG----LGVPMLAMP 299 (369)
Q Consensus 265 ~~iL~~~~~~~~I~hgG~~s~~eal~----~GvP~i~~P 299 (369)
.++...+++ +|+=||=||++.++. .++|++++-
T Consensus 37 ~~~~~~~d~--vi~iGGDGT~L~aa~~~~~~~~PilgIn 73 (272)
T PRK02231 37 EEIGQRAQL--AIVIGGDGNMLGRARVLAKYDIPLIGIN 73 (272)
T ss_pred HHhCcCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEe
Confidence 445456677 999999999998865 378988874
No 197
>PLN02929 NADH kinase
Probab=48.16 E-value=29 Score=31.78 Aligned_cols=67 Identities=12% Similarity=0.154 Sum_probs=44.5
Q ss_pred cccCcCceeecCChhhHHHHHh---hCCceeecCCCC------ChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHH
Q 048393 269 AHEATGCFLTHCGWNSTMEALG---LGVPMLAMPQWS------DQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCIN 339 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~---~GvP~i~~P~~~------dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~ 339 (369)
..+++ +|+-||=||++.|.. .++|++++=... +++.|... +.. -+|... .++.+++.+++.
T Consensus 63 ~~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~r-~lGfL~------~~~~~~~~~~L~ 132 (301)
T PLN02929 63 RDVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD-ARR-STGHLC------AATAEDFEQVLD 132 (301)
T ss_pred CCCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc-ccc-Cccccc------cCCHHHHHHHHH
Confidence 34466 999999999999955 478998876532 22333321 111 245443 357889999999
Q ss_pred HHhcCC
Q 048393 340 EILEGE 345 (369)
Q Consensus 340 ~~l~~~ 345 (369)
++++++
T Consensus 133 ~il~g~ 138 (301)
T PLN02929 133 DVLFGR 138 (301)
T ss_pred HHHcCC
Confidence 998764
No 198
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=48.06 E-value=63 Score=32.47 Aligned_cols=27 Identities=19% Similarity=0.229 Sum_probs=22.0
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|-..++|+|++-
T Consensus 72 ~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 104 (557)
T PRK08199 72 PGICFVTRGPGATNASIGVHTAFQDSTPMILFV 104 (557)
T ss_pred CEEEEeCCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34499998876 6788999999999873
No 199
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=48.04 E-value=41 Score=34.03 Aligned_cols=26 Identities=19% Similarity=0.317 Sum_probs=21.5
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.+|...++|+|++.
T Consensus 65 gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 65 GVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred EEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 4488888776 7889999999999884
No 200
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=46.92 E-value=67 Score=32.56 Aligned_cols=27 Identities=15% Similarity=0.198 Sum_probs=21.9
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|...++|+|++.
T Consensus 69 ~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 69 MGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44499998876 6678889999999885
No 201
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=46.83 E-value=35 Score=34.37 Aligned_cols=26 Identities=12% Similarity=0.220 Sum_probs=21.5
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.||...++|+|++.
T Consensus 78 gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 78 AVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred eEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3488888776 6889999999999884
No 202
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=46.73 E-value=1.8e+02 Score=25.17 Aligned_cols=46 Identities=9% Similarity=0.099 Sum_probs=35.3
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEE
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFL 233 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i 233 (369)
.+.+.+++... .+++.||=+.|........+++..++|+..|..+.
T Consensus 21 ~~~i~n~l~g~-~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~ 66 (224)
T COG3340 21 LPFIANFLQGK-RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVS 66 (224)
T ss_pred hHHHHHHhcCC-CceEEEEecCccccchHHHHHHHHHHHHHcCCeee
Confidence 45556666553 45699999988887777789999999999887765
No 203
>PRK06270 homoserine dehydrogenase; Provisional
Probab=46.43 E-value=1.1e+02 Score=28.59 Aligned_cols=59 Identities=12% Similarity=0.094 Sum_probs=37.7
Q ss_pred ChHHhhcccCcCceee------cCC---hhhHHHHHhhCCceee---cCCCCChhHHHHHHHhhcCceEEec
Q 048393 263 PQLGVLAHEATGCFLT------HCG---WNSTMEALGLGVPMLA---MPQWSDQSTNAKYIMDVGKMGLKVP 322 (369)
Q Consensus 263 p~~~iL~~~~~~~~I~------hgG---~~s~~eal~~GvP~i~---~P~~~dQ~~na~~~~~~~g~g~~~~ 322 (369)
.-.++|.+++.+++|- |+| ..-+.+|+.+|+++|+ -|+...-..-.+..++. |+.+..+
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~~-g~~~~~e 150 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKKN-GVRFRYE 150 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHHc-CCEEEEe
Confidence 4457776666555766 443 4466899999999999 47654333344445556 7766654
No 204
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=45.42 E-value=1.8e+02 Score=27.85 Aligned_cols=139 Identities=15% Similarity=0.172 Sum_probs=71.4
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCC-cEEEec-------cChHHhhccc
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQK-GLVVNW-------CPQLGVLAHE 271 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~p~~~iL~~~ 271 (369)
+.+++.-.||+... ..-.+++.|.+.+..|-..........+.+...+...++ +....| ..+.++...+
T Consensus 7 k~IllgvTGsiaa~---k~~~lv~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~~V~~~~~~~~~~~~~~hi~l~~~a 83 (399)
T PRK05579 7 KRIVLGVSGGIAAY---KALELVRRLRKAGADVRVVMTEAAKKFVTPLTFQALSGNPVSTDLWDPAAEAAMGHIELAKWA 83 (399)
T ss_pred CeEEEEEeCHHHHH---HHHHHHHHHHhCCCEEEEEECHhHHHHHhHHHHHHhhCCceEccccccccCCCcchhhccccc
Confidence 34777777777532 344556666666766554444332111111111111111 221112 2233444445
Q ss_pred CcCceeecCChhhHHHH-------------HhhCCceeecCCCC----C---hhHHHHHHHhhcCceEEecCC------C
Q 048393 272 ATGCFLTHCGWNSTMEA-------------LGLGVPMLAMPQWS----D---QSTNAKYIMDVGKMGLKVPAD------E 325 (369)
Q Consensus 272 ~~~~~I~hgG~~s~~ea-------------l~~GvP~i~~P~~~----d---Q~~na~~~~~~~g~g~~~~~~------~ 325 (369)
|+ .+|.=|-+||+.-. +.+++|++++|-.. + -..|..++.+. |+-+.-... +
T Consensus 84 D~-~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~-G~~ii~P~~g~la~~~ 161 (399)
T PRK05579 84 DL-VLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATLRSR-GVEIIGPASGRLACGD 161 (399)
T ss_pred CE-EEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHHHHC-CCEEECCCCccccCCC
Confidence 54 35666666655443 56799999999321 2 34577777777 755443311 1
Q ss_pred --CC-CcCHHHHHHHHHHHhc
Q 048393 326 --KG-IVRREAIAHCINEILE 343 (369)
Q Consensus 326 --~~-~~~~~~l~~~i~~~l~ 343 (369)
.| -.+.+++...+.+.+.
T Consensus 162 ~g~gr~~~~~~I~~~~~~~~~ 182 (399)
T PRK05579 162 VGPGRMAEPEEIVAAAERALS 182 (399)
T ss_pred cCCCCCCCHHHHHHHHHHHhh
Confidence 11 3467888888877764
No 205
>PRK13840 sucrose phosphorylase; Provisional
Probab=44.90 E-value=2.1e+02 Score=28.39 Aligned_cols=132 Identities=14% Similarity=0.241 Sum_probs=76.6
Q ss_pred hhHHHHHhccCCCCceEEEEe----C-----c-----cccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhccc
Q 048393 187 IESCMKWLNDRANGSVVYVSF----G-----S-----MATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDET 252 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~----G-----s-----~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~ 252 (369)
...|.+|+...+.+.+-|+.. | . .+..+.+.++.+.+.+...+..+-+...+.....+.. ++
T Consensus 269 ~~~L~~~l~~~p~~~~n~L~~HDgIgl~d~~~~~~~~~gll~~~e~~~l~~~~~~~~~~~~~~~~~~~as~~~~-Y~--- 344 (495)
T PRK13840 269 VEALAHWLEIRPRNAVTVLDTHDGIGIIDVGADDRGLAGLLPDEQIDNLVETIHANSHGESRQATGAAASNLDL-YQ--- 344 (495)
T ss_pred chHHHHHHHhCCCccEEeeecCCCCCcccccccccccccCCCHHHHHHHHHHHHHhccCceeecCCcccccccc-hh---
Confidence 456677888876655433331 1 1 2346677888999999887777777755432111110 00
Q ss_pred CCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHH
Q 048393 253 SQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRRE 332 (369)
Q Consensus 253 ~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 332 (369)
-| +.| -+.|...+-+.++.|+ .-...-|+|+|...-.--+...-..+++. |-|..+++. .++.+
T Consensus 345 -in---~~~---~~Al~~~d~r~lla~a-----i~~~~~GiP~iY~~~ll~~~ND~~~~~~t-~~~R~inR~---~~~~~ 408 (495)
T PRK13840 345 -VN---CTY---YDALGRNDQDYLAARA-----IQFFAPGIPQVYYVGLLAGPNDMELLART-NVGRDINRH---YYSTA 408 (495)
T ss_pred -hh---ccH---HHHhcCCcHHHHHHHH-----HHHcCCCcceeeechhhccCccHHHHHhc-CCCcccCCC---CCCHH
Confidence 00 111 0111111111122232 11233589999887665566666777888 999999988 89999
Q ss_pred HHHHHH
Q 048393 333 AIAHCI 338 (369)
Q Consensus 333 ~l~~~i 338 (369)
++.+++
T Consensus 409 ~~~~~l 414 (495)
T PRK13840 409 EIDEAL 414 (495)
T ss_pred HHHHHH
Confidence 988875
No 206
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=44.75 E-value=38 Score=30.01 Aligned_cols=43 Identities=19% Similarity=0.281 Sum_probs=32.4
Q ss_pred HHHcHHHHHHHHHhcCCCCEEEECCCcchHHH-------HHHHhCCCcEEEc
Q 048393 18 WKIGLQTFTELVERMNDVDCIVYDSFLPWALD-------VAKKFGLTGAAFL 62 (369)
Q Consensus 18 ~~~~~~~l~~ll~~~~~~D~vI~D~~~~~~~~-------~A~~lgiP~v~~~ 62 (369)
-....+.+.++|++. ++|+ |.|...+++.. +|++.|||++.|-
T Consensus 51 G~l~~e~l~~~l~e~-~i~l-lIDATHPyAa~iS~Na~~aake~gipy~r~e 100 (257)
T COG2099 51 GFLGAEGLAAFLREE-GIDL-LIDATHPYAARISQNAARAAKETGIPYLRLE 100 (257)
T ss_pred CcCCHHHHHHHHHHc-CCCE-EEECCChHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 345677899999998 7855 55777776654 5888999999863
No 207
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=44.67 E-value=82 Score=29.23 Aligned_cols=102 Identities=22% Similarity=0.318 Sum_probs=62.5
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeec
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTH 279 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~h 279 (369)
+.+-.+.+|.++ +++++-++..+.+++.--.... ++.. .-.-..|++..++|+.+|+ ++-|
T Consensus 147 ktvGIiG~GrIG-------~avA~r~~~Fgm~v~y~~~~~~----~~~~------~~~~~~y~~l~ell~~sDi--i~l~ 207 (324)
T COG1052 147 KTLGIIGLGRIG-------QAVARRLKGFGMKVLYYDRSPN----PEAE------KELGARYVDLDELLAESDI--ISLH 207 (324)
T ss_pred CEEEEECCCHHH-------HHHHHHHhcCCCEEEEECCCCC----hHHH------hhcCceeccHHHHHHhCCE--EEEe
Confidence 447788888887 4455555556777765433221 1110 0112467778899999999 8877
Q ss_pred CChhhHHHHHhhCCceeecCCCC--ChhHHHHHHHhhcCceEEe-cCCCCCCcCHHHHHHHHH
Q 048393 280 CGWNSTMEALGLGVPMLAMPQWS--DQSTNAKYIMDVGKMGLKV-PADEKGIVRREAIAHCIN 339 (369)
Q Consensus 280 gG~~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~~g~g~~~-~~~~~~~~~~~~l~~~i~ 339 (369)
| |+.. ..-.|++.++.. +-|..+ +....+.++++.|.++++
T Consensus 208 ~------------------Plt~~T~hLin~~~l~~m-k~ga~lVNtaRG~~VDe~ALi~AL~ 251 (324)
T COG1052 208 C------------------PLTPETRHLINAEELAKM-KPGAILVNTARGGLVDEQALIDALK 251 (324)
T ss_pred C------------------CCChHHhhhcCHHHHHhC-CCCeEEEECCCccccCHHHHHHHHH
Confidence 7 5443 455588888888 766544 333222567777777765
No 208
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=43.43 E-value=42 Score=33.83 Aligned_cols=26 Identities=15% Similarity=0.333 Sum_probs=21.7
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.||...++|+|++-
T Consensus 80 gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 80 GVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred eEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4489998887 5789999999999884
No 209
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=42.44 E-value=1e+02 Score=24.65 Aligned_cols=48 Identities=17% Similarity=0.193 Sum_probs=33.7
Q ss_pred HHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 048393 189 SCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVR 237 (369)
Q Consensus 189 ~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 237 (369)
.+.+..+......+|++++|+......+.++++++.+. .+.++++...
T Consensus 40 ~l~~~~~~~~~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 40 LIRQLKDSGKLRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred HHHHHHHcCCCCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 33333433223459999999999888888999998884 4577777654
No 210
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.28 E-value=40 Score=33.99 Aligned_cols=54 Identities=19% Similarity=0.328 Sum_probs=37.9
Q ss_pred ccCcCceeecCChhhHHHHHh----hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 270 HEATGCFLTHCGWNSTMEALG----LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
.+++ +|+-||=||++.+.. .++|++++-+. .+|... .++.+++.+++.++++++
T Consensus 348 ~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGin~G--------------~lGFL~------~~~~~~~~~~l~~~~~g~ 405 (569)
T PRK14076 348 EISH--IISIGGDGTVLRASKLVNGEEIPIICINMG--------------TVGFLT------EFSKEEIFKAIDSIISGE 405 (569)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------CCCcCc------ccCHHHHHHHHHHHHcCC
Confidence 3455 999999999999976 47898887432 122211 356778888888887664
No 211
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=42.18 E-value=49 Score=28.23 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=23.7
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| +||+|+.. .-+..=|.++|||+|++.-+.
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn 141 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCDTD 141 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEeeCC
Confidence 577 55667766 446666999999999986655
No 212
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=41.61 E-value=82 Score=31.63 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=22.1
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.||..-++|+|++-
T Consensus 65 ~gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 65 VGVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34489988876 7789999999999984
No 213
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=41.24 E-value=26 Score=28.94 Aligned_cols=27 Identities=19% Similarity=0.329 Sum_probs=20.2
Q ss_pred CceeecCChh------hHHHHHhhCCceeecCC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMPQ 300 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P~ 300 (369)
.++++|.|.| ++.+|...++|+|++.-
T Consensus 66 ~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 66 GVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp EEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred eEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 3388888764 67888899999998763
No 214
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=41.16 E-value=1.1e+02 Score=28.27 Aligned_cols=66 Identities=12% Similarity=0.152 Sum_probs=39.0
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHH-hCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCcee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLK-ASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFL 277 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I 277 (369)
.+.+..|.+|+++ +++++.+. ..+.+++..-.... +..... .-..+.+..++|+.+|+ ++
T Consensus 145 gktvGIiG~G~IG-------~~va~~l~~~fgm~V~~~~~~~~-----~~~~~~-----~~~~~~~l~ell~~sDv--v~ 205 (323)
T PRK15409 145 HKTLGIVGMGRIG-------MALAQRAHFGFNMPILYNARRHH-----KEAEER-----FNARYCDLDTLLQESDF--VC 205 (323)
T ss_pred CCEEEEEcccHHH-------HHHHHHHHhcCCCEEEEECCCCc-----hhhHHh-----cCcEecCHHHHHHhCCE--EE
Confidence 3558899999997 34455454 56777764322110 100000 01235577899999999 88
Q ss_pred ecCChh
Q 048393 278 THCGWN 283 (369)
Q Consensus 278 ~hgG~~ 283 (369)
-|+-.+
T Consensus 206 lh~plt 211 (323)
T PRK15409 206 IILPLT 211 (323)
T ss_pred EeCCCC
Confidence 887544
No 215
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=41.05 E-value=64 Score=27.23 Aligned_cols=41 Identities=17% Similarity=0.326 Sum_probs=30.0
Q ss_pred HHHHHHHhcCCCC--EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 24 TFTELVERMNDVD--CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 24 ~l~~ll~~~~~~D--~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.++++|++. +.+ ++|-.++. .+|..+|+++++|.|.+.|+-
T Consensus 48 ~l~~~i~~~-~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 48 QLEQLIEEL-KPENVVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred HHHHHHHhC-CCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 455666665 333 66666665 778889999999999887765
No 216
>PRK05858 hypothetical protein; Provisional
Probab=40.77 E-value=73 Score=31.89 Aligned_cols=25 Identities=12% Similarity=0.060 Sum_probs=20.8
Q ss_pred ceeecCChh------hHHHHHhhCCceeecC
Q 048393 275 CFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 275 ~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++.|.|.| .+.+|-..++|+|++.
T Consensus 70 v~~~t~GpG~~n~~~~i~~A~~~~~Pvl~i~ 100 (542)
T PRK05858 70 VAVLTAGPGVTNGMSAMAAAQFNQSPLVVLG 100 (542)
T ss_pred EEEEcCCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 388888765 7889999999999875
No 217
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=40.73 E-value=42 Score=30.38 Aligned_cols=29 Identities=10% Similarity=0.156 Sum_probs=23.3
Q ss_pred ccCcCceeecCChhhHHHHHh---hCCceeecCC
Q 048393 270 HEATGCFLTHCGWNSTMEALG---LGVPMLAMPQ 300 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~---~GvP~i~~P~ 300 (369)
.+++ +|+-||=||+.+++. .++|++++|.
T Consensus 57 ~~d~--vi~iGGDGTlL~a~~~~~~~~pi~gIn~ 88 (277)
T PRK03708 57 DVDF--IIAIGGDGTILRIEHKTKKDIPILGINM 88 (277)
T ss_pred CCCE--EEEEeCcHHHHHHHHhcCCCCeEEEEeC
Confidence 3455 999999999999984 4678888875
No 218
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=40.66 E-value=40 Score=30.23 Aligned_cols=38 Identities=16% Similarity=0.248 Sum_probs=24.5
Q ss_pred ceEEEEeCccccCCHH-HHHHHHHHHHh--CCCcEEEEEeC
Q 048393 201 SVVYVSFGSMATLKME-QMEELAWGLKA--SDKYFLWVVRE 238 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~-~~~~~~~~l~~--~~~~~i~~~~~ 238 (369)
.++++||||....... .+..+-+.+++ +++.|-|.+.+
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS 42 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTS 42 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchH
Confidence 4889999998865554 67777777765 57888888765
No 219
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=40.59 E-value=63 Score=29.67 Aligned_cols=33 Identities=9% Similarity=0.314 Sum_probs=25.7
Q ss_pred HhhcccCcCceeecCChhhHHHHHhhCCceeec
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~ 298 (369)
.++..-+-+++|++++..+..-|-..|+|.|.+
T Consensus 87 ~~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 87 NIIREYNPDLIISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred HHHHhcCCCEEEECCchHHHHHHHhcCCCEEEE
Confidence 344433334499999999999999999999965
No 220
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=40.44 E-value=44 Score=32.31 Aligned_cols=37 Identities=11% Similarity=0.257 Sum_probs=28.8
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcc
Q 048393 23 QTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 63 (369)
..+++++++. +||++|.+.. ...+|+++|+|.+.++.
T Consensus 360 ~e~~~~i~~~-~pdliig~~~---~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 360 TEVGDMIART-EPELIFGTQM---ERHIGKRLDIPCAVISA 396 (430)
T ss_pred HHHHHHHHhh-CCCEEEecch---hhHHHHHcCCCEEEEeC
Confidence 3466667666 8999999975 66789999999987633
No 221
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=40.40 E-value=1.5e+02 Score=30.20 Aligned_cols=27 Identities=22% Similarity=0.261 Sum_probs=22.1
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+++|..-++|+|++-
T Consensus 86 ~gv~~~t~GPG~~n~l~gl~~A~~d~~Pvl~i~ 118 (616)
T PRK07418 86 VGVCFGTSGPGATNLVTGIATAQMDSVPMVVIT 118 (616)
T ss_pred CeEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 44489998876 7788999999999874
No 222
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=40.15 E-value=59 Score=28.91 Aligned_cols=41 Identities=17% Similarity=0.338 Sum_probs=31.4
Q ss_pred cHHHHHHHHHhcCCCCEEEECCCcchHHH-------HHHHhCCCcEEEcc
Q 048393 21 GLQTFTELVERMNDVDCIVYDSFLPWALD-------VAKKFGLTGAAFLT 63 (369)
Q Consensus 21 ~~~~l~~ll~~~~~~D~vI~D~~~~~~~~-------~A~~lgiP~v~~~~ 63 (369)
....+.+++++. ++++ |.|+..++|.. +|+++|||++.|--
T Consensus 53 ~~~~l~~~l~~~-~i~~-VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 53 GAEGLAAYLREE-GIDL-VIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred CHHHHHHHHHHC-CCCE-EEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 567888999887 7866 56888777655 47889999998743
No 223
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=40.08 E-value=1.6e+02 Score=27.15 Aligned_cols=60 Identities=10% Similarity=0.070 Sum_probs=37.2
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+..|.+|+++ +++++.++..+.+|+..-.... ... ....+++..++|+.+|+ ++-
T Consensus 145 gktvGIiG~G~IG-------~~vA~~~~~fgm~V~~~d~~~~----~~~---------~~~~~~~l~ell~~sDv--v~l 202 (311)
T PRK08410 145 GKKWGIIGLGTIG-------KRVAKIAQAFGAKVVYYSTSGK----NKN---------EEYERVSLEELLKTSDI--ISI 202 (311)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhcCCEEEEECCCcc----ccc---------cCceeecHHHHhhcCCE--EEE
Confidence 4558999999987 3445555556777764322110 000 01235577899999998 887
Q ss_pred cC
Q 048393 279 HC 280 (369)
Q Consensus 279 hg 280 (369)
|+
T Consensus 203 h~ 204 (311)
T PRK08410 203 HA 204 (311)
T ss_pred eC
Confidence 76
No 224
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=40.07 E-value=44 Score=33.26 Aligned_cols=36 Identities=8% Similarity=0.259 Sum_probs=29.2
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEc
Q 048393 23 QTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFL 62 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 62 (369)
..+++.|++. +||+||-+.+ ...+|+++|||++.++
T Consensus 364 ~ei~~~I~~~-~pdliiGs~~---er~ia~~lgiP~~~is 399 (513)
T CHL00076 364 TEVGDMIARV-EPSAIFGTQM---ERHIGKRLDIPCGVIS 399 (513)
T ss_pred HHHHHHHHhc-CCCEEEECch---hhHHHHHhCCCEEEee
Confidence 4556777777 8999999974 7778999999998754
No 225
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=39.99 E-value=94 Score=31.28 Aligned_cols=27 Identities=15% Similarity=0.242 Sum_probs=22.1
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|...++|+|++-
T Consensus 67 ~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 67 VGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 34489998876 7788999999999884
No 226
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=39.55 E-value=42 Score=33.36 Aligned_cols=37 Identities=8% Similarity=0.214 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcc
Q 048393 23 QTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 63 (369)
..+++.|++. +||+||.+.+ ...+|+++|||++.++.
T Consensus 354 ~ei~~~i~~~-~pdliiG~~~---er~~a~~lgip~~~i~~ 390 (511)
T TIGR01278 354 QEVADAIAAL-EPELVLGTQM---ERHSAKRLDIPCGVISA 390 (511)
T ss_pred HHHHHHHHhc-CCCEEEEChH---HHHHHHHcCCCEEEecC
Confidence 3566667776 8999999974 78889999999987533
No 227
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=39.36 E-value=92 Score=28.91 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=23.5
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| +||.|... ..+..=|.++|||+|++.-+.
T Consensus 152 ~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn 185 (326)
T PRK12311 152 LPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTN 185 (326)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCC
Confidence 688 55566665 445556999999999986665
No 228
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=39.08 E-value=67 Score=26.38 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=26.1
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEE
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKASDKYFLWV 235 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~ 235 (369)
.+|+++||........+++.+.+|.+.+..-++.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~ 36 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVA 36 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEE
Confidence 7999999998777777888888888766433333
No 229
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=39.03 E-value=53 Score=31.78 Aligned_cols=35 Identities=14% Similarity=0.357 Sum_probs=28.9
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 23 QTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
..++++++.. ++|++|.+.. ...+|+++|||++.+
T Consensus 362 ~e~~~~l~~~-~~dliiG~s~---~~~~a~~~~ip~~~~ 396 (429)
T cd03466 362 FDIESYAKEL-KIDVLIGNSY---GRRIAEKLGIPLIRI 396 (429)
T ss_pred HHHHHHHHhc-CCCEEEECch---hHHHHHHcCCCEEEe
Confidence 4566777777 8999999976 688999999999864
No 230
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=38.88 E-value=49 Score=32.97 Aligned_cols=35 Identities=11% Similarity=0.215 Sum_probs=28.1
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEc
Q 048393 24 TFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFL 62 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 62 (369)
.+++.|++. +||+||.+.+ ...+|+++|||++.++
T Consensus 353 el~~~i~~~-~PdliiG~~~---er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 353 EVEDAIAEA-APELVLGTQM---ERHSAKRLGIPCAVIS 387 (519)
T ss_pred HHHHHHHhc-CCCEEEEcch---HHHHHHHcCCCEEEec
Confidence 556666666 8999998864 7789999999998753
No 231
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=38.51 E-value=51 Score=31.86 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=27.8
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 23 QTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
..+++++++. ++|++|.+.. ...+|+++|+|.+.+
T Consensus 361 ~el~~~i~~~-~pdliig~~~---~~~~a~~~~ip~i~~ 395 (428)
T cd01965 361 WDLESLAKEE-PVDLLIGNSH---GRYLARDLGIPLVRV 395 (428)
T ss_pred HHHHHHhhcc-CCCEEEECch---hHHHHHhcCCCEEEe
Confidence 4455566666 8999999976 678999999999864
No 232
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=38.39 E-value=62 Score=27.78 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=23.2
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| +||.|+.. .-|..=|.++|||+|++.-+.
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn 147 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTD 147 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCC
Confidence 578 55667665 335556999999999987665
No 233
>PRK11269 glyoxylate carboligase; Provisional
Probab=37.99 E-value=79 Score=32.04 Aligned_cols=27 Identities=19% Similarity=0.354 Sum_probs=21.8
Q ss_pred cCceeecCC------hhhHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCG------WNSTMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG------~~s~~eal~~GvP~i~~P 299 (369)
.+++++|.| .+.+.+|...++|+|++.
T Consensus 69 ~gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 101 (591)
T PRK11269 69 IGVCIGTSGPAGTDMITGLYSASADSIPILCIT 101 (591)
T ss_pred cEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 444788877 568899999999999885
No 234
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=37.30 E-value=79 Score=29.50 Aligned_cols=39 Identities=21% Similarity=0.382 Sum_probs=27.6
Q ss_pred cHHHHHHHHHhcCCCCEEEECCCcc-------h---HHHHHHHhCCCcEE
Q 048393 21 GLQTFTELVERMNDVDCIVYDSFLP-------W---ALDVAKKFGLTGAA 60 (369)
Q Consensus 21 ~~~~l~~ll~~~~~~D~vI~D~~~~-------~---~~~~A~~lgiP~v~ 60 (369)
....+.++++.. +||++|+-+.+- | +..+.++++||.++
T Consensus 68 a~~~i~~mv~~~-~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vt 116 (349)
T PF07355_consen 68 ALKKILEMVKKL-KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVT 116 (349)
T ss_pred HHHHHHHHHHhc-CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEE
Confidence 334555666666 999999998862 1 22357789999887
No 235
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=37.29 E-value=63 Score=25.28 Aligned_cols=37 Identities=19% Similarity=0.377 Sum_probs=26.4
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHh--CCCcEEEEEe
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKA--SDKYFLWVVR 237 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~--~~~~~i~~~~ 237 (369)
.++++++||......+.+..+.+.+++ .+..|-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 489999999987444567888888754 3456666654
No 236
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=37.19 E-value=2.3e+02 Score=23.17 Aligned_cols=136 Identities=15% Similarity=0.190 Sum_probs=64.1
Q ss_pred EeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhH
Q 048393 206 SFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNST 285 (369)
Q Consensus 206 s~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~ 285 (369)
-+||.. +....++....|+..+..+-..+-+. ...|+.+ ..|+-+ ......++||.=+|...-
T Consensus 4 imGS~S--D~~~~~~a~~~L~~~gi~~dv~V~Sa--HRtp~~~----------~~~~~~---a~~~g~~viIa~AG~aa~ 66 (156)
T TIGR01162 4 IMGSDS--DLPTMKKAADILEEFGIPYELRVVSA--HRTPELM----------LEYAKE---AEERGIKVIIAGAGGAAH 66 (156)
T ss_pred EECcHh--hHHHHHHHHHHHHHcCCCeEEEEECc--ccCHHHH----------HHHHHH---HHHCCCeEEEEeCCccch
Confidence 345543 45567777777777776644333322 1222221 111111 011123348887776543
Q ss_pred HHHH---hhCCceeecCCCCC--hhHHH-HHHHh--hcCc--eEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 048393 286 MEAL---GLGVPMLAMPQWSD--QSTNA-KYIMD--VGKM--GLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNAD 355 (369)
Q Consensus 286 ~eal---~~GvP~i~~P~~~d--Q~~na-~~~~~--~~g~--g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~ 355 (369)
+-.+ ..-+|+|.+|.... .-.++ .-+.+ . |+ +.+--.+ ..++.-+...|-. ++|+ .++++.+
T Consensus 67 Lpgvva~~t~~PVIgvP~~~~~l~G~daLlS~vqmP~-gvpvatv~I~~---~~nAa~~AaqIl~-~~d~---~l~~kl~ 138 (156)
T TIGR01162 67 LPGMVAALTPLPVIGVPVPSKALSGLDSLLSIVQMPS-GVPVATVAIGN---AGNAALLAAQILG-IKDP---ELAEKLK 138 (156)
T ss_pred hHHHHHhccCCCEEEecCCccCCCCHHHHHHHhcCCC-CCeeEEEEcCC---hhHHHHHHHHHHc-CCCH---HHHHHHH
Confidence 3332 24678999987432 11111 12222 2 32 2221111 3345544443322 2566 6777777
Q ss_pred HHHHHHHHHHh
Q 048393 356 KWRNFAKEAVA 366 (369)
Q Consensus 356 ~l~~~~~~~~~ 366 (369)
..++..++.+.
T Consensus 139 ~~r~~~~~~v~ 149 (156)
T TIGR01162 139 EYRENQKEEVL 149 (156)
T ss_pred HHHHHHHHHHH
Confidence 77777666554
No 237
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=36.73 E-value=59 Score=31.56 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=28.0
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 24 TFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
.+++++++. ++|++|.... ...+|+++|||.+.+
T Consensus 364 ~l~~~i~~~-~~dliig~s~---~k~~A~~l~ip~ir~ 397 (432)
T TIGR01285 364 DLEDLACAA-GADLLITNSH---GRALAQRLALPLVRA 397 (432)
T ss_pred HHHHHHhhc-CCCEEEECcc---hHHHHHHcCCCEEEe
Confidence 556677776 8999999876 688999999998864
No 238
>PRK07064 hypothetical protein; Provisional
Probab=36.69 E-value=1.1e+02 Score=30.48 Aligned_cols=26 Identities=38% Similarity=0.584 Sum_probs=21.6
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.++++|.|.| .+.||...++|+|++-
T Consensus 68 ~v~~~t~GpG~~N~~~~i~~A~~~~~Pvl~i~ 99 (544)
T PRK07064 68 GVALTSTGTGAGNAAGALVEALTAGTPLLHIT 99 (544)
T ss_pred eEEEeCCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 4489998876 6788999999999874
No 239
>PRK06932 glycerate dehydrogenase; Provisional
Probab=36.30 E-value=1.8e+02 Score=26.88 Aligned_cols=62 Identities=15% Similarity=0.169 Sum_probs=38.9
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+..|.+|+++ +++++.++..+.+++.. .... ... ....+.+..++|+.+|+ ++-
T Consensus 147 gktvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~~----~~~---------~~~~~~~l~ell~~sDi--v~l 203 (314)
T PRK06932 147 GSTLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHKG----ASV---------CREGYTPFEEVLKQADI--VTL 203 (314)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCCc----ccc---------cccccCCHHHHHHhCCE--EEE
Confidence 3558899999987 45555566677787643 2110 000 01235667899999999 888
Q ss_pred cCChh
Q 048393 279 HCGWN 283 (369)
Q Consensus 279 hgG~~ 283 (369)
|+-.+
T Consensus 204 ~~Plt 208 (314)
T PRK06932 204 HCPLT 208 (314)
T ss_pred cCCCC
Confidence 87533
No 240
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=36.22 E-value=52 Score=34.31 Aligned_cols=77 Identities=18% Similarity=0.055 Sum_probs=47.8
Q ss_pred EEeccChH---HhhcccCcCceeec---CCh-hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcC
Q 048393 258 VVNWCPQL---GVLAHEATGCFLTH---CGW-NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVR 330 (369)
Q Consensus 258 ~~~~~p~~---~iL~~~~~~~~I~h---gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~ 330 (369)
+.+++++. .+++.+|+ |+.- -|. .++.|++++|+|-.+.|...+-..-+. ++ .-|+.++. .+
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~---~l-~~~llv~P-----~d 414 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA---EL-AEALLVNP-----ND 414 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH---Hh-CcCeEECC-----CC
Confidence 44667766 57788888 7653 244 588999999775222222111111111 22 33777774 48
Q ss_pred HHHHHHHHHHHhcCC
Q 048393 331 REAIAHCINEILEGE 345 (369)
Q Consensus 331 ~~~l~~~i~~~l~~~ 345 (369)
.+.+.++|.++++.+
T Consensus 415 ~~~la~ai~~~l~~~ 429 (726)
T PRK14501 415 IEGIAAAIKRALEMP 429 (726)
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999864
No 241
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=36.21 E-value=87 Score=31.57 Aligned_cols=27 Identities=26% Similarity=0.479 Sum_probs=22.1
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|...++|+|++.
T Consensus 68 ~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 68 VGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34489898877 5789999999999884
No 242
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]
Probab=36.18 E-value=4.8e+02 Score=26.51 Aligned_cols=111 Identities=25% Similarity=0.338 Sum_probs=60.6
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.++++++|++.. .....++.|.+.+..+-.+ ...-...+.+++. ..+..+-++ +||
T Consensus 501 G~~vail~~G~~~~----~al~vae~L~~~Gi~~TVv-d~rfvkPlD~~ll---------------~~La~~h~~--~vt 558 (627)
T COG1154 501 GEKVAILAFGTMLP----EALKVAEKLNAYGISVTVV-DPRFVKPLDEALL---------------LELAKSHDL--VVT 558 (627)
T ss_pred CCcEEEEecchhhH----HHHHHHHHHHhcCCCcEEE-cCeecCCCCHHHH---------------HHHHhhcCe--EEE
Confidence 44599999999974 3344455555544432211 1110112222211 122333333 444
Q ss_pred ------cCChhh-HHHHHh-hC--Ccee--ecCC-CCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 279 ------HCGWNS-TMEALG-LG--VPML--AMPQ-WSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 279 ------hgG~~s-~~eal~-~G--vP~i--~~P~-~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
+||.|| +.|.+. +| +|++ ++|. +.||..-.+...+. .++++.+.+.|.+.+..
T Consensus 559 lEe~~~~GG~Gs~v~efl~~~~~~~~v~~lglpd~fi~hg~~~el~~~~-------------gLd~~~i~~~i~~~l~~ 624 (627)
T COG1154 559 LEENVVDGGFGSAVLEFLAAHGILVPVLNLGLPDEFIDHGSPEELLAEL-------------GLDAEGIARRILEWLKA 624 (627)
T ss_pred EecCcccccHHHHHHHHHHhcCCCCceEEecCChHhhccCCHHHHHHHc-------------CCCHHHHHHHHHHHHhh
Confidence 889875 566655 34 5655 5553 45666666666655 47888888888777643
No 243
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=35.83 E-value=82 Score=28.53 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhh-
Q 048393 213 LKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGL- 291 (369)
Q Consensus 213 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~- 291 (369)
.+.+..+++.+++.+...+.||...++... ..+.++++...+-++|+. ||=.....++.-+++.
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGG~ga-------------~rlL~~ld~~~~~~~pK~--~iGySDiTaL~~~l~~~ 110 (282)
T cd07025 46 TDEERAADLNAAFADPEIKAIWCARGGYGA-------------NRLLPYLDYDLIRANPKI--FVGYSDITALHLALYAK 110 (282)
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCcCCH-------------HHhhhhCCHHHHhhCCeE--EEEecHHHHHHHHHHHh
Confidence 345668899999999999999998775321 123344444444455555 6666666666666543
Q ss_pred -CCceeecCC
Q 048393 292 -GVPMLAMPQ 300 (369)
Q Consensus 292 -GvP~i~~P~ 300 (369)
|++.+.=|+
T Consensus 111 ~g~~t~hGp~ 120 (282)
T cd07025 111 TGLVTFHGPM 120 (282)
T ss_pred cCceEEECcc
Confidence 566655554
No 244
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=35.80 E-value=43 Score=27.85 Aligned_cols=39 Identities=13% Similarity=0.056 Sum_probs=26.3
Q ss_pred HHHHHHHHHhcCCCCEEEECCCcch--HHHHHHHhCCCcEEEc
Q 048393 22 LQTFTELVERMNDVDCIVYDSFLPW--ALDVAKKFGLTGAAFL 62 (369)
Q Consensus 22 ~~~l~~ll~~~~~~D~vI~D~~~~~--~~~~A~~lgiP~v~~~ 62 (369)
.+.++.+++. +||+||....... ....-+..|||++.+.
T Consensus 59 ~~n~E~ll~l--~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 59 SLNVELIVAL--KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCCHHHHhcc--CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 3566677654 8999998654422 3344577899988764
No 245
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=35.54 E-value=65 Score=20.05 Aligned_cols=26 Identities=23% Similarity=0.497 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 048393 330 RREAIAHCINEILEGERGKEIKQNADKW 357 (369)
Q Consensus 330 ~~~~l~~~i~~~l~~~~~~~~~~~a~~l 357 (369)
+++.|.+||..+.++. .++++.|+..
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 4688999999998763 2777777654
No 246
>PRK06487 glycerate dehydrogenase; Provisional
Probab=35.39 E-value=1.9e+02 Score=26.72 Aligned_cols=60 Identities=13% Similarity=0.090 Sum_probs=38.3
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+..+.+|+++ +++++.++..+.+++..-... .+. ...++...++|+.+|+ ++-
T Consensus 148 gktvgIiG~G~IG-------~~vA~~l~~fgm~V~~~~~~~-----~~~----------~~~~~~l~ell~~sDi--v~l 203 (317)
T PRK06487 148 GKTLGLLGHGELG-------GAVARLAEAFGMRVLIGQLPG-----RPA----------RPDRLPLDELLPQVDA--LTL 203 (317)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhCCCEEEEECCCC-----Ccc----------cccccCHHHHHHhCCE--EEE
Confidence 4558999999987 455566666788876432111 010 1234567789999998 888
Q ss_pred cCCh
Q 048393 279 HCGW 282 (369)
Q Consensus 279 hgG~ 282 (369)
|+-.
T Consensus 204 ~lPl 207 (317)
T PRK06487 204 HCPL 207 (317)
T ss_pred CCCC
Confidence 8643
No 247
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=34.64 E-value=55 Score=31.63 Aligned_cols=37 Identities=22% Similarity=0.158 Sum_probs=29.5
Q ss_pred HHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEc
Q 048393 22 LQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFL 62 (369)
Q Consensus 22 ~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 62 (369)
...+.+++++. +||++|.... ...+|+++|||...+.
T Consensus 358 ~~e~~~~i~~~-~pDliig~~~---~~~~a~k~giP~~~~~ 394 (421)
T cd01976 358 HYELEEFVKRL-KPDLIGSGIK---EKYVFQKMGIPFRQMH 394 (421)
T ss_pred HHHHHHHHHHh-CCCEEEecCc---chhhhhhcCCCeEeCC
Confidence 34566777777 9999999976 6778999999997653
No 248
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=34.61 E-value=56 Score=32.90 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=21.7
Q ss_pred ceeecCChh------hHHHHHhhCCceeecCC
Q 048393 275 CFLTHCGWN------STMEALGLGVPMLAMPQ 300 (369)
Q Consensus 275 ~~I~hgG~~------s~~eal~~GvP~i~~P~ 300 (369)
+++.|.|.| .+.||-..++|||++.-
T Consensus 75 v~~vt~GpG~~N~l~~i~~A~~~~~Pvl~IsG 106 (568)
T PRK07449 75 AVIVTSGTAVANLYPAVIEAGLTGVPLIVLTA 106 (568)
T ss_pred EEEECCccHHHhhhHHHHHHhhcCCcEEEEEC
Confidence 388888876 78899999999999853
No 249
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=34.20 E-value=2e+02 Score=27.41 Aligned_cols=70 Identities=21% Similarity=0.305 Sum_probs=49.8
Q ss_pred HHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCce-EEecCCCCCCcCHHHHHHHHHHHhc
Q 048393 265 LGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMG-LKVPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 265 ~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g-~~~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
..+++++++ +|. .=.-++.=|++.|+|.|++-+ |+.+...++++ |+- ..+... .++.+.+.+++.+.+.
T Consensus 280 ~~~l~~~dl--~Vg-~R~HsaI~al~~g~p~i~i~Y---~~K~~~l~~~~-gl~~~~~~i~---~~~~~~l~~~~~e~~~ 349 (385)
T COG2327 280 GGILAACDL--IVG-MRLHSAIMALAFGVPAIAIAY---DPKVRGLMQDL-GLPGFAIDID---PLDAEILSAVVLERLT 349 (385)
T ss_pred HHHhccCce--EEe-ehhHHHHHHHhcCCCeEEEee---cHHHHHHHHHc-CCCcccccCC---CCchHHHHHHHHHHHh
Confidence 357888887 664 234578889999999999854 55555666767 664 444444 7899999888887764
Q ss_pred C
Q 048393 344 G 344 (369)
Q Consensus 344 ~ 344 (369)
+
T Consensus 350 ~ 350 (385)
T COG2327 350 K 350 (385)
T ss_pred c
Confidence 4
No 250
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=33.77 E-value=70 Score=31.85 Aligned_cols=35 Identities=14% Similarity=0.102 Sum_probs=28.1
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 23 QTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
..++++|... ++|++|.+.. +..+|+++|||.+.+
T Consensus 427 ~~l~~~l~~~-~~DlliG~s~---~k~~a~~~giPlir~ 461 (515)
T TIGR01286 427 WHLRSLVFTE-PVDFLIGNSY---GKYIQRDTLVPLIRI 461 (515)
T ss_pred HHHHHHHhhc-CCCEEEECch---HHHHHHHcCCCEEEe
Confidence 4556666666 8999999875 788999999998874
No 251
>COG3150 Predicted esterase [General function prediction only]
Probab=33.66 E-value=67 Score=26.71 Aligned_cols=43 Identities=16% Similarity=0.206 Sum_probs=30.7
Q ss_pred HHHHHHHHhcCCCCEEEECCCc--chHHHHHHHhCCCcEEEcccc
Q 048393 23 QTFTELVERMNDVDCIVYDSFL--PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~ 65 (369)
+.++.+|++....+.+|+-... +|+-.++..+||+.|.|.|..
T Consensus 47 ~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~Girav~~NPav 91 (191)
T COG3150 47 KELEKAVQELGDESPLIVGSSLGGYYATWLGFLCGIRAVVFNPAV 91 (191)
T ss_pred HHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhCChhhhcCCCc
Confidence 3555666665434455555444 899999999999999988765
No 252
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=33.66 E-value=1.1e+02 Score=30.79 Aligned_cols=26 Identities=19% Similarity=0.248 Sum_probs=21.3
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.+|...++|||++.
T Consensus 70 gv~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 70 GVCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 3488888876 6689999999999985
No 253
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=33.52 E-value=61 Score=27.56 Aligned_cols=30 Identities=20% Similarity=0.301 Sum_probs=25.6
Q ss_pred CCCEEEECCCcchHHHHHHHhCCCcEEEcc
Q 048393 34 DVDCIVYDSFLPWALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 34 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 63 (369)
.+.+||+|-.--.++..|++.|||+..+..
T Consensus 29 ~i~~Visd~~~A~~lerA~~~gIpt~~~~~ 58 (200)
T COG0299 29 EIVAVISDKADAYALERAAKAGIPTVVLDR 58 (200)
T ss_pred EEEEEEeCCCCCHHHHHHHHcCCCEEEecc
Confidence 577999998777799999999999987643
No 254
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=33.50 E-value=80 Score=30.02 Aligned_cols=102 Identities=21% Similarity=0.153 Sum_probs=56.5
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCccCCCCcchh---cccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCc
Q 048393 218 MEELAWGLKASDKYFLWVVRESEQSKLPENFS---DETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVP 294 (369)
Q Consensus 218 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP 294 (369)
..++++.+....-.++..+|++. |-.++. ++... |-.+-++-|+ |..++..|+.+|.|
T Consensus 205 g~EIl~ql~~~~~AI~vpVGGGG---LiaGIat~vk~~~p---------------~vkIIGVEt~-~a~~f~~sl~~g~~ 265 (457)
T KOG1250|consen 205 GLEILEQLKEPDGAIVVPVGGGG---LIAGIATGVKRVGP---------------HVKIIGVETE-GAHSFNASLKAGKP 265 (457)
T ss_pred HHHHHHhhcCCCCeEEEecCCch---hHHHHHHHHHHhCC---------------CCceEEEeec-CcHHHHHHHhcCCe
Confidence 36677777666656777777652 222221 12222 3333336666 57899999999998
Q ss_pred eee--cCCCCCh------hHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 295 MLA--MPQWSDQ------STNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 295 ~i~--~P~~~dQ------~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+-. ++...|- -.|+.++...+--.+. .++.+++..+|.++++|+
T Consensus 266 V~lp~i~s~AdglaV~~Vg~~tf~~a~~~~d~vv-------vV~~~ei~aaI~~l~ede 317 (457)
T KOG1250|consen 266 VTLPKITSLADGLAVKTVGENTFELAQKLVDRVV-------VVEDDEIAAAILRLFEDE 317 (457)
T ss_pred eecccccchhcccccchhhHHHHHHHHhcCceEE-------EeccHHHHHHHHHHHHhh
Confidence 642 2222221 1233333222011222 357788999999999887
No 255
>PRK08327 acetolactate synthase catalytic subunit; Validated
Probab=33.45 E-value=1.9e+02 Score=29.24 Aligned_cols=28 Identities=14% Similarity=0.249 Sum_probs=22.1
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecCC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMPQ 300 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P~ 300 (369)
.+++++|.|.| .+.+|...++|+|++.-
T Consensus 76 ~gv~~~t~GPG~~N~~~gla~A~~d~~Pvl~I~G 109 (569)
T PRK08327 76 PQAVMVHVDVGTANALGGVHNAARSRIPVLVFAG 109 (569)
T ss_pred CeEEEEecCHHHHHHHHHHHHHhhcCCCEEEEec
Confidence 44488888876 67888999999998753
No 256
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated
Probab=33.16 E-value=97 Score=31.26 Aligned_cols=27 Identities=22% Similarity=0.333 Sum_probs=22.0
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|...++|||++-
T Consensus 68 ~gv~~~t~GpG~~n~l~gia~A~~~~~Pvl~i~ 100 (572)
T PRK08979 68 VGVVLVTSGPGATNTITGIATAYMDSIPMVVLS 100 (572)
T ss_pred CeEEEECCCchHhHHHHHHHHHhhcCCCEEEEe
Confidence 44489998877 5788899999999885
No 257
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated
Probab=32.42 E-value=1.6e+02 Score=29.78 Aligned_cols=26 Identities=23% Similarity=0.346 Sum_probs=21.7
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| ++.+|...++|+|++-
T Consensus 69 gv~~vt~GPG~~N~l~gl~~A~~~~~Pvl~i~ 100 (574)
T PRK06466 69 GVVLVTSGPGATNAITGIATAYMDSIPMVVLS 100 (574)
T ss_pred EEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 3489998876 7788999999999884
No 258
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=32.27 E-value=73 Score=32.02 Aligned_cols=26 Identities=23% Similarity=0.321 Sum_probs=21.4
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.+|...++|+|++-
T Consensus 72 ~v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 103 (561)
T PRK06048 72 GVCVATSGPGATNLVTGIATAYMDSVPIVALT 103 (561)
T ss_pred eEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3388888776 6788999999999884
No 259
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=32.18 E-value=3e+02 Score=25.34 Aligned_cols=66 Identities=8% Similarity=-0.013 Sum_probs=38.1
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeec
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTH 279 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~h 279 (369)
+.+.++.+|+++ +.+++-+...|.+++..-.... .. +++ ..........++|+.+|+ ++.|
T Consensus 137 ~tvgIvG~G~IG-------~~vA~~l~afG~~V~~~~~~~~--~~-~~~-------~~~~~~~~l~e~l~~aDv--vv~~ 197 (312)
T PRK15469 137 FTIGILGAGVLG-------SKVAQSLQTWGFPLRCWSRSRK--SW-PGV-------QSFAGREELSAFLSQTRV--LINL 197 (312)
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCEEEEEeCCCC--CC-CCc-------eeecccccHHHHHhcCCE--EEEC
Confidence 458899999987 4556666677887653322111 00 010 011122334578999998 8888
Q ss_pred CChhh
Q 048393 280 CGWNS 284 (369)
Q Consensus 280 gG~~s 284 (369)
.-.+.
T Consensus 198 lPlt~ 202 (312)
T PRK15469 198 LPNTP 202 (312)
T ss_pred CCCCH
Confidence 76543
No 260
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=32.18 E-value=1.6e+02 Score=27.93 Aligned_cols=94 Identities=17% Similarity=0.034 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCCccC-CC----C-----cchhcccCCC--cEEEeccChH---HhhcccCcCceeec
Q 048393 215 MEQMEELAWGLKASDKYFLWVVRESEQS-KL----P-----ENFSDETSQK--GLVVNWCPQL---GVLAHEATGCFLTH 279 (369)
Q Consensus 215 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~~----~-----~~~~~~~~~~--~~~~~~~p~~---~iL~~~~~~~~I~h 279 (369)
...+..+++++.+.+.++...+..+... .+ . .+- ....++ +.+.+|+||. .+|-.+|+ -+-+
T Consensus 194 ~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~-~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--NfVR 270 (374)
T PF10093_consen 194 NAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGD-SWQRGNLTLHVLPFVPQDDYDRLLWACDF--NFVR 270 (374)
T ss_pred chHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCcc-ccccCCeEEEECCCCCHHHHHHHHHhCcc--ceEe
Confidence 3458888999988888877776654211 01 1 000 011233 4456899998 58999998 5656
Q ss_pred CChhhHHHHHhhCCceeecCCCCChhHHHHHHH
Q 048393 280 CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIM 312 (369)
Q Consensus 280 gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~ 312 (369)
|--|..-|..+|+|+|=-.+..|.......++
T Consensus 271 -GEDSfVRAqwAgkPFvWhIYpQ~d~aHl~KL~ 302 (374)
T PF10093_consen 271 -GEDSFVRAQWAGKPFVWHIYPQEDDAHLDKLD 302 (374)
T ss_pred -cchHHHHHHHhCCCceEecCcCchhhHHHHHH
Confidence 57899999999999994444333333333333
No 261
>PRK08266 hypothetical protein; Provisional
Probab=31.81 E-value=1.3e+02 Score=30.12 Aligned_cols=26 Identities=23% Similarity=0.342 Sum_probs=21.7
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.||-..++|+|++-
T Consensus 70 ~v~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 101 (542)
T PRK08266 70 GVCSVVPGPGVLNAGAALLTAYGCNSPVLCLT 101 (542)
T ss_pred eEEEECCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 3488888876 7889999999999874
No 262
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=31.71 E-value=1.1e+02 Score=29.13 Aligned_cols=70 Identities=21% Similarity=0.339 Sum_probs=44.9
Q ss_pred cCceeecCChhhHHHHHhh------------C-----CceeecCCCCChhHHHHHHHhhcCceEEe-cCCCCCCcCHHHH
Q 048393 273 TGCFLTHCGWNSTMEALGL------------G-----VPMLAMPQWSDQSTNAKYIMDVGKMGLKV-PADEKGIVRREAI 334 (369)
Q Consensus 273 ~~~~I~hgG~~s~~eal~~------------G-----vP~i~~P~~~dQ~~na~~~~~~~g~g~~~-~~~~~~~~~~~~l 334 (369)
.++++|.||..+.+.|+.+ | .|+|..+-.. ++-..+-+.-+ |+|++. ..++++.++.+.|
T Consensus 104 ~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa~~l-Glg~~~I~~~~~~~md~~~L 181 (373)
T PF00282_consen 104 AGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAARIL-GLGVRKIPTDEDGRMDIEAL 181 (373)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHHHHT-TSEEEEE-BBTTSSB-HHHH
T ss_pred CceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhccee-eeEEEEecCCcchhhhHHHh
Confidence 4569999999888877543 3 4567776544 34444444444 999544 3344457899999
Q ss_pred HHHHHHHhcC
Q 048393 335 AHCINEILEG 344 (369)
Q Consensus 335 ~~~i~~~l~~ 344 (369)
+++|.+...+
T Consensus 182 ~~~l~~~~~~ 191 (373)
T PF00282_consen 182 EKALEKDIAN 191 (373)
T ss_dssp HHHHHHHHHT
T ss_pred hhhhcccccc
Confidence 9999876544
No 263
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=31.60 E-value=3.4e+02 Score=25.36 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=23.5
Q ss_pred hCCceeecCCCCCh-----hHHHHHHHhhcCc-eEEecCC
Q 048393 291 LGVPMLAMPQWSDQ-----STNAKYIMDVGKM-GLKVPAD 324 (369)
Q Consensus 291 ~GvP~i~~P~~~dQ-----~~na~~~~~~~g~-g~~~~~~ 324 (369)
++.|+|+.|.+.-- ..-|...... |+ |+.++.+
T Consensus 261 ~~lPVi~d~sH~~G~~~~v~~~a~AAvA~-GAdGliIE~H 299 (335)
T PRK08673 261 THLPVIVDPSHATGKRDLVEPLALAAVAA-GADGLIVEVH 299 (335)
T ss_pred cCCCEEEeCCCCCccccchHHHHHHHHHh-CCCEEEEEec
Confidence 58999999976533 2456666666 87 6888876
No 264
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=31.32 E-value=2.4e+02 Score=21.62 Aligned_cols=67 Identities=16% Similarity=-0.039 Sum_probs=38.4
Q ss_pred HHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHH
Q 048393 147 EWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLK 226 (369)
Q Consensus 147 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~ 226 (369)
..+...++.+.+.|+..| .+++.+-....+.+ +|.+|.-. ....+.+.++++.++
T Consensus 21 ~~l~~~G~~vi~lG~~vp----------------------~e~~~~~a~~~~~d-~V~iS~~~--~~~~~~~~~~~~~L~ 75 (122)
T cd02071 21 RALRDAGFEVIYTGLRQT----------------------PEEIVEAAIQEDVD-VIGLSSLS--GGHMTLFPEVIELLR 75 (122)
T ss_pred HHHHHCCCEEEECCCCCC----------------------HHHHHHHHHHcCCC-EEEEcccc--hhhHHHHHHHHHHHH
Confidence 346666788889898654 33333333332222 55554332 345566788888888
Q ss_pred hCCC-cEEEEEeC
Q 048393 227 ASDK-YFLWVVRE 238 (369)
Q Consensus 227 ~~~~-~~i~~~~~ 238 (369)
+.+. .+.+.+++
T Consensus 76 ~~~~~~i~i~~GG 88 (122)
T cd02071 76 ELGAGDILVVGGG 88 (122)
T ss_pred hcCCCCCEEEEEC
Confidence 7644 55555554
No 265
>PRK09213 pur operon repressor; Provisional
Probab=31.02 E-value=95 Score=28.01 Aligned_cols=30 Identities=17% Similarity=0.160 Sum_probs=23.2
Q ss_pred CCCEEEECCCc--chHHHHHHHhCCCcEEEcc
Q 048393 34 DVDCIVYDSFL--PWALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 34 ~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~~ 63 (369)
++|+|+.=..- +.|..+|..+|+|.+..--
T Consensus 130 ~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK 161 (271)
T PRK09213 130 KIDAVMTVETKGIPLAYAVANYLNVPFVIVRR 161 (271)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEE
Confidence 78988875443 7788899999999887533
No 266
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated
Probab=30.98 E-value=1.2e+02 Score=30.81 Aligned_cols=27 Identities=22% Similarity=0.300 Sum_probs=21.7
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|...++|+|++.
T Consensus 85 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 117 (587)
T PRK06965 85 VGVALVTSGPGVTNAVTGIATAYMDSIPMVVIS 117 (587)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 33489998865 6778899999999986
No 267
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=30.89 E-value=63 Score=32.60 Aligned_cols=95 Identities=11% Similarity=0.107 Sum_probs=49.3
Q ss_pred cChHHhhcccCcCceeecCC-h-hhHHHHHhhCCceeecCCCC-ChhHHHH--HHHhhcCceEEecCCCCCCcCHHHHHH
Q 048393 262 CPQLGVLAHEATGCFLTHCG-W-NSTMEALGLGVPMLAMPQWS-DQSTNAK--YIMDVGKMGLKVPADEKGIVRREAIAH 336 (369)
Q Consensus 262 ~p~~~iL~~~~~~~~I~hgG-~-~s~~eal~~GvP~i~~P~~~-dQ~~na~--~~~~~~g~g~~~~~~~~~~~~~~~l~~ 336 (369)
++..+++.-+++++|-+-== | -|-+||+++|||.|.-=+.+ -++.+-. .-... |+-++-+. .-+.++..+
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~-GV~VvdR~----~~n~~e~v~ 535 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEY-GVYVVDRR----DKNYDESVN 535 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGG-TEEEE-SS----SS-HHHHHH
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCC-cEEEEeCC----CCCHHHHHH
Confidence 35668888888877766210 2 48999999999999766532 1222111 11234 54443333 345555555
Q ss_pred HHHHHh----cCC--cHHHHHHHHHHHHHHH
Q 048393 337 CINEIL----EGE--RGKEIKQNADKWRNFA 361 (369)
Q Consensus 337 ~i~~~l----~~~--~~~~~~~~a~~l~~~~ 361 (369)
.|.+.| .-. +....|+++++|++++
T Consensus 536 ~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 536 QLADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 555444 222 2356777888777653
No 268
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=30.49 E-value=3.2e+02 Score=22.80 Aligned_cols=101 Identities=11% Similarity=0.036 Sum_probs=52.8
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCc-cCCCCcchhcccCCCcEEEeccChH
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESE-QSKLPENFSDETSQKGLVVNWCPQL 265 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~ 265 (369)
..++-+++... ...+|+.|.. .....++.++..+.+-.++=.....- ....+.. ......++.....+
T Consensus 21 A~~lG~~la~~---g~~lV~GGg~----~GlM~a~a~ga~~~gG~viGi~p~~l~~~~~~~~----~~~~~i~~~~~~~R 89 (178)
T TIGR00730 21 AAELGAYLAGQ---GWGLVYGGGR----VGLMGAIADAAMENGGTAVGVNPSGLFSGEVVHQ----NLTELIEVNGMHER 89 (178)
T ss_pred HHHHHHHHHHC---CCEEEECCCh----HhHHHHHHHHHHhcCCeEEEecchhhhhhhccCC----CCCceEEECCHHHH
Confidence 45666777653 3778887752 12445566666666655553332210 0000000 01122344444433
Q ss_pred -Hhh-cccCcCceeecCChhhHHHHHh---------hCCceeecC
Q 048393 266 -GVL-AHEATGCFLTHCGWNSTMEALG---------LGVPMLAMP 299 (369)
Q Consensus 266 -~iL-~~~~~~~~I~hgG~~s~~eal~---------~GvP~i~~P 299 (369)
.+| ..+|. .++--||.||+-|... +.+|++++=
T Consensus 90 k~~m~~~sda-~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 90 KAMMAELADA-FIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred HHHHHHhCCE-EEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 344 44554 3445578899998843 489988764
No 269
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=30.30 E-value=2.7e+02 Score=25.08 Aligned_cols=111 Identities=19% Similarity=0.285 Sum_probs=55.1
Q ss_pred CceEEEEeCccccCCHHHHHHHHH---HH-HhCCCcEEEEEeCCcc-CCCCcchhcccCCCcEEE-eccChH--Hhhccc
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAW---GL-KASDKYFLWVVRESEQ-SKLPENFSDETSQKGLVV-NWCPQL--GVLAHE 271 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~---~l-~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~p~~--~iL~~~ 271 (369)
++.|.|+.........+..+.+++ .+ ++.+.++++.-..... ......+.....++..+. ..-|+. .+++++
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~ 251 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASA 251 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhC
Confidence 457777775533233333344333 33 3347777765432111 111111222222222222 222333 578888
Q ss_pred CcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCc
Q 048393 272 ATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKM 317 (369)
Q Consensus 272 ~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~ 317 (369)
++ +|+-= .-++.=|+.+|||.++++. | +.....++.. |+
T Consensus 252 ~~--vI~~R-lH~~I~A~~~gvP~i~i~y--~-~K~~~~~~~~-g~ 290 (298)
T TIGR03609 252 RL--VIGMR-LHALILAAAAGVPFVALSY--D-PKVRAFAADA-GV 290 (298)
T ss_pred CE--EEEec-hHHHHHHHHcCCCEEEeec--c-HHHHHHHHHh-CC
Confidence 87 88753 3356668889999998853 2 3444444444 54
No 270
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=30.27 E-value=1.1e+02 Score=27.44 Aligned_cols=38 Identities=29% Similarity=0.563 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCCEEEECCCcchHHHH-------HHHhCCCcEEE
Q 048393 22 LQTFTELVERMNDVDCIVYDSFLPWALDV-------AKKFGLTGAAF 61 (369)
Q Consensus 22 ~~~l~~ll~~~~~~D~vI~D~~~~~~~~~-------A~~lgiP~v~~ 61 (369)
...+.+++++. ++| +|.|...+++..+ |+++|||++.|
T Consensus 54 ~~~l~~~l~~~-~i~-~VIDAtHPfA~~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 54 PQELREFLKRH-SID-ILVDATHPFAAQITTNATAVCKELGIPYVRF 98 (256)
T ss_pred HHHHHHHHHhc-CCC-EEEEcCCHHHHHHHHHHHHHHHHhCCcEEEE
No 271
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=29.96 E-value=1e+02 Score=26.07 Aligned_cols=38 Identities=16% Similarity=0.002 Sum_probs=26.0
Q ss_pred HHHHHHHhcCCCCEEEECCCc--chHHHHHHHhCCCcEEEc
Q 048393 24 TFTELVERMNDVDCIVYDSFL--PWALDVAKKFGLTGAAFL 62 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~ 62 (369)
.+.+.+++. ++|+|+.=..- +.|..+|..+|+|.+...
T Consensus 41 ~l~~~~~~~-~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vR 80 (191)
T TIGR01744 41 EFARRFADD-GITKIVTIEASGIAPAIMTGLKLGVPVVFAR 80 (191)
T ss_pred HHHHHhccC-CCCEEEEEccccHHHHHHHHHHHCCCEEEEE
Confidence 333334444 78998854332 678889999999998853
No 272
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=29.80 E-value=5.6e+02 Score=25.31 Aligned_cols=140 Identities=14% Similarity=0.128 Sum_probs=74.2
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCC-cEEEec-------cChHHhhcc
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQK-GLVVNW-------CPQLGVLAH 270 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~p~~~iL~~ 270 (369)
.+.+++.-.||+... ....+++.|.+.+..|-..........+.+.-.+....+ ++.--| +.+.++...
T Consensus 70 ~k~IllgVtGsIAay---ka~~lvr~L~k~G~~V~VvmT~sA~~fv~p~~~~~ls~~~V~~d~~~~~~~~~~~Hi~la~~ 146 (475)
T PRK13982 70 SKRVTLIIGGGIAAY---KALDLIRRLKERGAHVRCVLTKAAQQFVTPLTASALSGQRVYTDLFDPESEFDAGHIRLARD 146 (475)
T ss_pred CCEEEEEEccHHHHH---HHHHHHHHHHhCcCEEEEEECcCHHHHhhHHHHHHhcCCceEecCCCcccccCccchhhhhh
Confidence 345777777887642 344566667777776555444332111111111111111 222112 224454445
Q ss_pred cCcCceeecCChhhHHH-------------HHhhCCceeecCCCCC----h---hHHHHHHHhhcCceEEecCC------
Q 048393 271 EATGCFLTHCGWNSTME-------------ALGLGVPMLAMPQWSD----Q---STNAKYIMDVGKMGLKVPAD------ 324 (369)
Q Consensus 271 ~~~~~~I~hgG~~s~~e-------------al~~GvP~i~~P~~~d----Q---~~na~~~~~~~g~g~~~~~~------ 324 (369)
+|+ .+|.=+-+||+.- .+..+.|++++|-... . ..|...+.+. |+-+.-...
T Consensus 147 aD~-~vVAPATANTIAKiA~GiADnLlt~v~La~~~PvliaPaMN~~M~~npat~~Nl~~L~~~-G~~vi~P~~g~lA~~ 224 (475)
T PRK13982 147 CDL-IVVAPATADLMAKMANGLADDLASAILLAANRPILLAPAMNPLMWNNPATRRNVAQLKRD-GVHMIGPNAGEMAER 224 (475)
T ss_pred cCE-EEEeeCCHHHHHHHHccccCcHHHHHHHhcCCCEEEEEcCCHHHhcCHHHHHHHHHHHHC-CCEEECCCCCccccC
Confidence 554 3555566665443 3667999999995432 2 3677888887 765543321
Q ss_pred -C--CC-CcCHHHHHHHHHHHhc
Q 048393 325 -E--KG-IVRREAIAHCINEILE 343 (369)
Q Consensus 325 -~--~~-~~~~~~l~~~i~~~l~ 343 (369)
+ .| -.++++|...+.+++.
T Consensus 225 g~~G~Grm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 225 GEAGVGRMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHh
Confidence 1 12 2457778888877763
No 273
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=29.72 E-value=1.8e+02 Score=25.95 Aligned_cols=39 Identities=13% Similarity=0.153 Sum_probs=29.7
Q ss_pred HHHHHhcCCCCEEEECCCc--chHHHHHHHhCCCcEEEcccc
Q 048393 26 TELVERMNDVDCIVYDSFL--PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 26 ~~ll~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.+++++. +..||+++... ..+..+|+..|+|.+.+.+..
T Consensus 210 ~~~ik~~-~v~~if~e~~~~~~~~~~la~~~g~~v~~ld~~~ 250 (266)
T cd01018 210 IDLAKEK-GVRVVFVQPQFSTKSAEAIAREIGAKVVTIDPLA 250 (266)
T ss_pred HHHHHHc-CCCEEEEcCCCCcHHHHHHHHHcCCeEEEeCCcH
Confidence 3444444 89999999887 345679999999998887665
No 274
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=29.69 E-value=56 Score=28.18 Aligned_cols=38 Identities=13% Similarity=0.174 Sum_probs=23.1
Q ss_pred HHHHHHHhcC-CCCEEEECCCcch---HHH----HHHHhCCCcEEE
Q 048393 24 TFTELVERMN-DVDCIVYDSFLPW---ALD----VAKKFGLTGAAF 61 (369)
Q Consensus 24 ~l~~ll~~~~-~~D~vI~D~~~~~---~~~----~A~~lgiP~v~~ 61 (369)
.+.+.++.+. .||+|++|-.... .+. +.-.+++|+|.+
T Consensus 82 ~l~~~~~~l~~~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGV 127 (208)
T cd06559 82 PLLEALEKLKTKPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGV 127 (208)
T ss_pred HHHHHHHhCCCCCCEEEEeCCccccCCCcchhheeeeecCCCEEEE
Confidence 3445555543 6999999977532 233 444456777764
No 275
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=29.65 E-value=1.4e+02 Score=25.06 Aligned_cols=37 Identities=24% Similarity=0.197 Sum_probs=27.2
Q ss_pred HHHHHHHhcCCCCEEEECCCc--chHHHHHHHhCCCcEEE
Q 048393 24 TFTELVERMNDVDCIVYDSFL--PWALDVAKKFGLTGAAF 61 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~ 61 (369)
.+.+..+.. ++|.|++=..- +.|..+|.++|+|++..
T Consensus 44 ~~~~~~~~~-~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~v 82 (179)
T COG0503 44 ELAERYKDD-GIDKIVTIEARGIPLAAAVALELGVPFVPV 82 (179)
T ss_pred HHHHHhccc-CCCEEEEEccccchhHHHHHHHhCCCEEEE
Confidence 444444444 79988875553 77999999999999874
No 276
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=29.61 E-value=97 Score=30.05 Aligned_cols=34 Identities=15% Similarity=0.249 Sum_probs=26.8
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 24 TFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
.+++.++.. ++|++|.... ...+|+++|||++.+
T Consensus 368 e~~~~i~~~-~pDliiG~s~---~~~~a~~~gip~v~~ 401 (435)
T cd01974 368 HLRSLLFTE-PVDLLIGNTY---GKYIARDTDIPLVRF 401 (435)
T ss_pred HHHHHHhhc-CCCEEEECcc---HHHHHHHhCCCEEEe
Confidence 445555555 8999999875 788999999998864
No 277
>CHL00067 rps2 ribosomal protein S2
Probab=29.61 E-value=1.8e+02 Score=25.52 Aligned_cols=32 Identities=25% Similarity=0.266 Sum_probs=23.2
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| +||.|+.. ..+..=|.++|||+|++.-+.
T Consensus 161 ~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivDTn 194 (230)
T CHL00067 161 LPDIVIIIDQQEEYTALRECRKLGIPTISILDTN 194 (230)
T ss_pred CCCEEEEeCCcccHHHHHHHHHcCCCEEEEEeCC
Confidence 678 55556555 346666999999999986665
No 278
>PRK08617 acetolactate synthase; Reviewed
Probab=29.36 E-value=1.2e+02 Score=30.52 Aligned_cols=26 Identities=27% Similarity=0.385 Sum_probs=21.3
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.||-..++|+|++-
T Consensus 69 gv~~vt~GpG~~N~l~gl~~A~~~~~Pvlvis 100 (552)
T PRK08617 69 GVVLVTSGPGVSNLATGLVTATAEGDPVVAIG 100 (552)
T ss_pred EEEEECCCCcHhHhHHHHHHHhhcCCCEEEEe
Confidence 3388887776 7888999999999885
No 279
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=29.27 E-value=76 Score=26.36 Aligned_cols=31 Identities=29% Similarity=0.386 Sum_probs=22.6
Q ss_pred CCCEEEECCCcchHHHHHHHhCCCcEEEcccchH
Q 048393 34 DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCA 67 (369)
Q Consensus 34 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 67 (369)
++|+||-+.. ...+|+++|+|++.+.++.-+
T Consensus 125 G~~viVGg~~---~~~~A~~~gl~~v~i~sg~es 155 (176)
T PF06506_consen 125 GVDVIVGGGV---VCRLARKLGLPGVLIESGEES 155 (176)
T ss_dssp T--EEEESHH---HHHHHHHTTSEEEESS--HHH
T ss_pred CCcEEECCHH---HHHHHHHcCCcEEEEEecHHH
Confidence 8999999965 678999999999988775433
No 280
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=29.19 E-value=45 Score=26.71 Aligned_cols=39 Identities=28% Similarity=0.372 Sum_probs=28.3
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHH-----hCCCcEEEEEeCC
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLK-----ASDKYFLWVVRES 239 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~-----~~~~~~i~~~~~~ 239 (369)
.+++|+.|+-.......+..++.... .....++|.++..
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 38999999988766677777777665 2346999999875
No 281
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=29.11 E-value=1.1e+02 Score=27.02 Aligned_cols=28 Identities=25% Similarity=0.279 Sum_probs=21.7
Q ss_pred CCCEEEECCCc--chHHHHHHHhCCCcEEE
Q 048393 34 DVDCIVYDSFL--PWALDVAKKFGLTGAAF 61 (369)
Q Consensus 34 ~~D~vI~D~~~--~~~~~~A~~lgiP~v~~ 61 (369)
.+|+|++=..- +.|..+|..+|+|.+..
T Consensus 111 ~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~ 140 (238)
T PRK08558 111 RVDVVLTAATDGIPLAVAIASYFGADLVYA 140 (238)
T ss_pred CCCEEEEECcccHHHHHHHHHHHCcCEEEE
Confidence 78988764443 77888999999998864
No 282
>PRK07586 hypothetical protein; Validated
Probab=28.89 E-value=1.2e+02 Score=30.09 Aligned_cols=25 Identities=20% Similarity=0.189 Sum_probs=19.8
Q ss_pred ceeecCChhhHH------HHHhhCCceeecC
Q 048393 275 CFLTHCGWNSTM------EALGLGVPMLAMP 299 (369)
Q Consensus 275 ~~I~hgG~~s~~------eal~~GvP~i~~P 299 (369)
++++|.|.|.+. +|-..++|+|++.
T Consensus 67 v~~~t~GPG~~N~~~gl~~A~~~~~Pvl~i~ 97 (514)
T PRK07586 67 ATLLHLGPGLANGLANLHNARRARTPIVNIV 97 (514)
T ss_pred EEEecccHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 388888877444 7888999999885
No 283
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.81 E-value=82 Score=27.73 Aligned_cols=54 Identities=17% Similarity=0.123 Sum_probs=39.3
Q ss_pred cCCHHHHHHHHHHHcHHHHHHHHHhcCCCCEEEECCCcc---hHHHHHHHhCCCcEE
Q 048393 7 AESNQAYVDRFWKIGLQTFTELVERMNDVDCIVYDSFLP---WALDVAKKFGLTGAA 60 (369)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~D~vI~D~~~~---~~~~~A~~lgiP~v~ 60 (369)
+-.+..++.+-.....+.++.+++.+.+-++.+.|.-.. -+..+|.+.|||++.
T Consensus 122 ~~GlnNhmGs~~tsn~~aM~~~m~~Lk~r~l~flDs~T~a~S~a~~iAk~~gVp~~~ 178 (250)
T COG2861 122 AVGLNNHMGSRFTSNEDAMEKLMEALKERGLYFLDSGTIANSLAGKIAKEIGVPVIK 178 (250)
T ss_pred ceeehhhhhhhhcCcHHHHHHHHHHHHHCCeEEEcccccccchhhhhHhhcCCceee
Confidence 334455566556666777777887777778999998873 356689999999886
No 284
>PLN02727 NAD kinase
Probab=28.78 E-value=98 Score=32.96 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=38.0
Q ss_pred cccCcCceeecCChhhHHHHHhh----CCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 269 AHEATGCFLTHCGWNSTMEALGL----GVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
..+|+ +|+=||=||++.|+.. ++|++++-+. .+|... .++.+++.++|.+++++
T Consensus 742 ~~~DL--VIvLGGDGTlLrAar~~~~~~iPILGINlG--------------rLGFLT------di~~ee~~~~L~~Il~G 799 (986)
T PLN02727 742 ERVDF--VACLGGDGVILHASNLFRGAVPPVVSFNLG--------------SLGFLT------SHYFEDFRQDLRQVIHG 799 (986)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEeCC--------------Cccccc------cCCHHHHHHHHHHHHcC
Confidence 34566 9999999999999764 6888877431 112221 35677788888888765
Q ss_pred C
Q 048393 345 E 345 (369)
Q Consensus 345 ~ 345 (369)
.
T Consensus 800 ~ 800 (986)
T PLN02727 800 N 800 (986)
T ss_pred C
Confidence 4
No 285
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=28.70 E-value=3.3e+02 Score=25.97 Aligned_cols=61 Identities=13% Similarity=0.080 Sum_probs=37.8
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+-.|.+|.++ +.+++.+...|.+++.. .... .. .+ ....+.+..++|+.+|+ ++-
T Consensus 116 gktvGIIG~G~IG-------~~vA~~l~a~G~~V~~~-dp~~-~~--~~---------~~~~~~~L~ell~~sDi--I~l 173 (378)
T PRK15438 116 DRTVGIVGVGNVG-------RRLQARLEALGIKTLLC-DPPR-AD--RG---------DEGDFRSLDELVQEADI--LTF 173 (378)
T ss_pred CCEEEEECcCHHH-------HHHHHHHHHCCCEEEEE-CCcc-cc--cc---------cccccCCHHHHHhhCCE--EEE
Confidence 4558889999987 45556666678887633 2110 00 00 01246677899999998 776
Q ss_pred cCC
Q 048393 279 HCG 281 (369)
Q Consensus 279 hgG 281 (369)
|.-
T Consensus 174 h~P 176 (378)
T PRK15438 174 HTP 176 (378)
T ss_pred eCC
Confidence 663
No 286
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=28.69 E-value=93 Score=29.98 Aligned_cols=29 Identities=21% Similarity=0.230 Sum_probs=23.6
Q ss_pred HHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 29 VERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 29 l~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
+++. ++|++|.... +..+|+++|||.+.+
T Consensus 346 ~~~~-~pDl~Ig~s~---~~~~a~~~giP~~r~ 374 (416)
T cd01980 346 VEEY-RPDLAIGTTP---LVQYAKEKGIPALYY 374 (416)
T ss_pred Hhhc-CCCEEEeCCh---hhHHHHHhCCCEEEe
Confidence 3444 9999999855 778999999999874
No 287
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.53 E-value=1.7e+02 Score=26.92 Aligned_cols=67 Identities=16% Similarity=0.070 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhh----
Q 048393 216 EQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGL---- 291 (369)
Q Consensus 216 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~---- 291 (369)
+.+..+.+.|++.+..+.+...... ..+. ..+ . ...-.++++ +|+-||=||+.+++..
T Consensus 19 ~~~~~i~~~L~~~g~~v~v~~~~~~--~~~~------------~~~-~-~~~~~~~d~--vi~~GGDGT~l~~~~~~~~~ 80 (305)
T PRK02645 19 EAAERCAKQLEARGCKVLMGPSGPK--DNPY------------PVF-L-ASASELIDL--AIVLGGDGTVLAAARHLAPH 80 (305)
T ss_pred HHHHHHHHHHHHCCCEEEEecCchh--hccc------------cch-h-hccccCcCE--EEEECCcHHHHHHHHHhccC
Confidence 3466677778777877654322111 0000 001 1 112234566 9999999999999863
Q ss_pred CCceeecCC
Q 048393 292 GVPMLAMPQ 300 (369)
Q Consensus 292 GvP~i~~P~ 300 (369)
++|++++..
T Consensus 81 ~~pv~gin~ 89 (305)
T PRK02645 81 DIPILSVNV 89 (305)
T ss_pred CCCEEEEec
Confidence 889998875
No 288
>PRK07282 acetolactate synthase catalytic subunit; Reviewed
Probab=28.52 E-value=1.1e+02 Score=30.75 Aligned_cols=27 Identities=22% Similarity=0.372 Sum_probs=21.9
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|...++|+|++-
T Consensus 74 ~gv~~~t~GPG~~n~~~gla~A~~~~~Pvl~i~ 106 (566)
T PRK07282 74 LGVAVVTSGPGATNAITGIADAMSDSVPLLVFT 106 (566)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34489998887 5778889999999985
No 289
>PRK07574 formate dehydrogenase; Provisional
Probab=28.29 E-value=2.1e+02 Score=27.34 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=39.7
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeec
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTH 279 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~h 279 (369)
+.+..|.+|+++ +.+++.+...+.+++.. .... .+...... .. +..+....++++.+|+ ++.|
T Consensus 193 ktVGIvG~G~IG-------~~vA~~l~~fG~~V~~~-dr~~---~~~~~~~~--~g--~~~~~~l~ell~~aDv--V~l~ 255 (385)
T PRK07574 193 MTVGIVGAGRIG-------LAVLRRLKPFDVKLHYT-DRHR---LPEEVEQE--LG--LTYHVSFDSLVSVCDV--VTIH 255 (385)
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCCCEEEEE-CCCC---CchhhHhh--cC--ceecCCHHHHhhcCCE--EEEc
Confidence 448888999887 45566666677776533 2211 11111000 01 2223456689999999 9999
Q ss_pred CChhh
Q 048393 280 CGWNS 284 (369)
Q Consensus 280 gG~~s 284 (369)
+-.+.
T Consensus 256 lPlt~ 260 (385)
T PRK07574 256 CPLHP 260 (385)
T ss_pred CCCCH
Confidence 87554
No 290
>PRK13278 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; Provisional
Probab=28.05 E-value=4.7e+02 Score=24.69 Aligned_cols=120 Identities=13% Similarity=0.191 Sum_probs=64.9
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEe-c---c
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN-W---C 262 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~ 262 (369)
.+++.+.++....+.+...++||... -.+++++++.|.+.+...........+ . ....+...++. | .
T Consensus 4 ~~~~~~~~~~y~~~~~~i~~~~shsa------L~I~~gAkeeGf~ti~v~~~~~~~~y~-~--~~~~De~i~v~~~~di~ 74 (358)
T PRK13278 4 KEEILEILKKYDLDNITIATIGSHSS------LQILKGAKKEGFRTIAICKKKREVFYK-R--FPVADEFIIVDDFSDIL 74 (358)
T ss_pred HHHHHHHHHhcCcccceEEEEecccH------HHHHHHHHHCCCeEEEEEeCCCccccc-c--ccccceEEEEcchhhhc
Confidence 34477777776555577888899875 347888899999888777654321111 1 11113344443 5 2
Q ss_pred ChH---HhhcccCcCceeecCChhhH--HHHHh-hCCceeecC----CCCChhHHHHHHHhhcCce
Q 048393 263 PQL---GVLAHEATGCFLTHCGWNST--MEALG-LGVPMLAMP----QWSDQSTNAKYIMDVGKMG 318 (369)
Q Consensus 263 p~~---~iL~~~~~~~~I~hgG~~s~--~eal~-~GvP~i~~P----~~~dQ~~na~~~~~~~g~g 318 (369)
+.. .+.+.-.+ +|+||.-... ++-+. +|+|+..-+ ...|...--+.+++. |+-
T Consensus 75 ~~~~~~~l~~~~~i--iIp~gs~v~y~~~d~l~~~~~p~~gn~~~l~~e~dK~~~k~~L~~a-GIp 137 (358)
T PRK13278 75 NEAVQEKLREMNAI--LIPHGSFVAYLGLENVEKFKVPMFGNREILRWEADRDKERKLLEEA-GIR 137 (358)
T ss_pred CHHHHHHHhhcCcE--EEeCCCcceeecHHHHHHCCCCcCCCHHHHHHhcCHHHHHHHHHHc-CCC
Confidence 222 23333333 8888754422 22233 777743322 334555555566666 544
No 291
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=27.68 E-value=3.8e+02 Score=24.90 Aligned_cols=105 Identities=20% Similarity=0.182 Sum_probs=64.4
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+-.|.+|.++ +++++-++..+.+++..-...... . .+ -..........++|+.+|+ ++.
T Consensus 142 gkTvGIiG~G~IG-------~~va~~l~afgm~v~~~d~~~~~~-~-~~-------~~~~~~~~~Ld~lL~~sDi--v~l 203 (324)
T COG0111 142 GKTVGIIGLGRIG-------RAVAKRLKAFGMKVIGYDPYSPRE-R-AG-------VDGVVGVDSLDELLAEADI--LTL 203 (324)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCCCeEEEECCCCchh-h-hc-------cccceecccHHHHHhhCCE--EEE
Confidence 3558889999987 455566666788877442211110 0 00 0123344457799999998 877
Q ss_pred cCChhhHHHHHhhCCceeecCCCC--ChhHHHHHHHhhcCce-EEecCCCCCCcCHHHHHHHHHH
Q 048393 279 HCGWNSTMEALGLGVPMLAMPQWS--DQSTNAKYIMDVGKMG-LKVPADEKGIVRREAIAHCINE 340 (369)
Q Consensus 279 hgG~~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~~g~g-~~~~~~~~~~~~~~~l~~~i~~ 340 (369)
|. |+.. ....|++.+... .=| +.++....+.++.+.|.+++++
T Consensus 204 h~------------------PlT~eT~g~i~~~~~a~M-K~gailIN~aRG~vVde~aL~~AL~~ 249 (324)
T COG0111 204 HL------------------PLTPETRGLINAEELAKM-KPGAILINAARGGVVDEDALLAALDS 249 (324)
T ss_pred cC------------------CCCcchhcccCHHHHhhC-CCCeEEEECCCcceecHHHHHHHHHc
Confidence 74 7764 455688888877 544 4555432236777778887764
No 292
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=27.54 E-value=1e+02 Score=27.63 Aligned_cols=32 Identities=25% Similarity=0.243 Sum_probs=23.2
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| ++|.|+.- ..+..=|.++|||+|++.-+.
T Consensus 157 ~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn 190 (258)
T PRK05299 157 LPDALFVVDPNKEHIAVKEARKLGIPVVAIVDTN 190 (258)
T ss_pred CCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeCC
Confidence 688 55566655 445556999999999986655
No 293
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=27.45 E-value=48 Score=30.03 Aligned_cols=38 Identities=24% Similarity=0.416 Sum_probs=31.1
Q ss_pred CChhhH--HHHHhhCCceeecCCCCChhHHHHH-HHhhcCce
Q 048393 280 CGWNST--MEALGLGVPMLAMPQWSDQSTNAKY-IMDVGKMG 318 (369)
Q Consensus 280 gG~~s~--~eal~~GvP~i~~P~~~dQ~~na~~-~~~~~g~g 318 (369)
||||++ .-|-.+||-++++-+...|..+|+. +.+. |+-
T Consensus 81 CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~-gl~ 121 (283)
T COG2230 81 CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAAR-GLE 121 (283)
T ss_pred CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHc-CCC
Confidence 677754 4566679999999999999999976 7777 887
No 294
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=27.39 E-value=52 Score=29.17 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=22.9
Q ss_pred cCcCceeecCChhhHHHHHhh----CCceeecCC
Q 048393 271 EATGCFLTHCGWNSTMEALGL----GVPMLAMPQ 300 (369)
Q Consensus 271 ~~~~~~I~hgG~~s~~eal~~----GvP~i~~P~ 300 (369)
+++ +|+-||=||++.|+.. ++|++++-.
T Consensus 26 ~Dl--vi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 26 ADV--IVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred CCE--EEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 455 9999999999988664 789888764
No 295
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=27.34 E-value=2.9e+02 Score=25.82 Aligned_cols=104 Identities=21% Similarity=0.325 Sum_probs=60.3
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+..+.+|+++ ..+++-|...+..+....+.. .+.....+ .-..++.-.+.++.+|+ +|-
T Consensus 162 gK~vgilG~G~IG-------~~ia~rL~~Fg~~i~y~~r~~----~~~~~~~~-----~~~~~~d~~~~~~~sD~--ivv 223 (336)
T KOG0069|consen 162 GKTVGILGLGRIG-------KAIAKRLKPFGCVILYHSRTQ----LPPEEAYE-----YYAEFVDIEELLANSDV--IVV 223 (336)
T ss_pred CCEEEEecCcHHH-------HHHHHhhhhccceeeeecccC----CchhhHHH-----hcccccCHHHHHhhCCE--EEE
Confidence 4558999999997 455555655563333332221 11111100 01125566788888888 665
Q ss_pred cCChhhHHHHHhhCCceeecCCCC--ChhHHHHHHHhhcCceEEec-CCCCCCcCHHHHHHHHH
Q 048393 279 HCGWNSTMEALGLGVPMLAMPQWS--DQSTNAKYIMDVGKMGLKVP-ADEKGIVRREAIAHCIN 339 (369)
Q Consensus 279 hgG~~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~~g~g~~~~-~~~~~~~~~~~l~~~i~ 339 (369)
|| |+.. ..-.|...++.. +-|..+- ....+-++.+.+.+++.
T Consensus 224 ~~------------------pLt~~T~~liNk~~~~~m-k~g~vlVN~aRG~iide~~l~eaL~ 268 (336)
T KOG0069|consen 224 NC------------------PLTKETRHLINKKFIEKM-KDGAVLVNTARGAIIDEEALVEALK 268 (336)
T ss_pred ec------------------CCCHHHHHHhhHHHHHhc-CCCeEEEeccccccccHHHHHHHHh
Confidence 54 6653 456688999988 8876654 32122566777777764
No 296
>TIGR01862 N2-ase-Ialpha nitrogenase component I, alpha chain. This model represents the alpha chain of all three varieties (Mo-Fe, V-Fe, and Fe-Fe) of component I of nitrogenase.
Probab=27.11 E-value=78 Score=30.81 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=26.7
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 24 TFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
.+.+.+++. ++|++|.... +..+|+++|||.+.+
T Consensus 378 e~~~~i~~~-~pdllig~s~---~~~~A~~lgip~~~~ 411 (443)
T TIGR01862 378 EFEEILEKL-KPDIIFSGIK---EKFVAQKLGVPYRQM 411 (443)
T ss_pred HHHHHHHhc-CCCEEEEcCc---chhhhhhcCCCeEec
Confidence 445556666 8999998875 688999999999864
No 297
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated
Probab=26.99 E-value=2.2e+02 Score=28.70 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=21.9
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|...++|+|++-
T Consensus 68 ~gv~~~t~GPG~~n~l~gi~~A~~~~~Pvl~i~ 100 (574)
T PRK07979 68 VGVVLVTSGPGATNAITGIATAYMDSIPLVVLS 100 (574)
T ss_pred ceEEEECCCccHhhhHHHHHHHhhcCCCEEEEE
Confidence 34489998887 4678999999999884
No 298
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=26.90 E-value=74 Score=30.76 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=24.0
Q ss_pred HHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 28 LVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 28 ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
.+++. ++|++|.... +..+|+++|||.+.+
T Consensus 350 ~l~~~-~pDllig~s~---~~~~A~k~gIP~vr~ 379 (422)
T TIGR02015 350 AVLEF-EPDLAIGTTP---LVQFAKEHGIPALYF 379 (422)
T ss_pred HHhhC-CCCEEEcCCc---chHHHHHcCCCEEEe
Confidence 34444 9999999955 677899999999884
No 299
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=26.73 E-value=1.5e+02 Score=29.67 Aligned_cols=30 Identities=10% Similarity=0.195 Sum_probs=24.4
Q ss_pred ccCcCceeecCChhhHHHHHhhCCceeecCCCC
Q 048393 270 HEATGCFLTHCGWNSTMEALGLGVPMLAMPQWS 302 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~ 302 (369)
.+|+ +|+.||...+... +..+|+|-++..+
T Consensus 64 ~~dv--iIsrG~ta~~i~~-~~~iPVv~i~~s~ 93 (538)
T PRK15424 64 RCDA--IIAAGSNGAYLKS-RLSVPVILIKPSG 93 (538)
T ss_pred CCcE--EEECchHHHHHHh-hCCCCEEEecCCH
Confidence 4455 9999999999988 4679999998754
No 300
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=26.45 E-value=1.1e+02 Score=25.84 Aligned_cols=32 Identities=28% Similarity=0.241 Sum_probs=22.9
Q ss_pred CCCE-EEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVDC-IVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D~-vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.||+ ||.|+.. ..+..=|.++|||++++.-+.
T Consensus 127 ~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 127 LPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 7884 5556544 445566999999999986655
No 301
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=26.44 E-value=1.3e+02 Score=27.58 Aligned_cols=72 Identities=13% Similarity=0.050 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHh--h
Q 048393 214 KMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALG--L 291 (369)
Q Consensus 214 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~--~ 291 (369)
+.+..+++.+++.+...+.||.+.++... ..+.++++...+-+||+. ||=.....++.-+++ +
T Consensus 51 ~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-------------~rlL~~lD~~~i~~~PK~--fiGySDiTaL~~al~~~~ 115 (308)
T cd07062 51 PEERAEELMAAFADPSIKAIIPTIGGDDS-------------NELLPYLDYELIKKNPKI--FIGYSDITALHLAIYKKT 115 (308)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCcccCH-------------hhhhhhcCHHHHhhCCCE--EEeccHHHHHHHHHHHhc
Confidence 45668889999999999999998765321 123444444445556655 666666666666663 3
Q ss_pred CCceeecCC
Q 048393 292 GVPMLAMPQ 300 (369)
Q Consensus 292 GvP~i~~P~ 300 (369)
|++.+.=|+
T Consensus 116 g~~t~hGp~ 124 (308)
T cd07062 116 GLVTYYGPN 124 (308)
T ss_pred CCeEEECcc
Confidence 565555554
No 302
>PHA02754 hypothetical protein; Provisional
Probab=26.41 E-value=90 Score=20.59 Aligned_cols=23 Identities=13% Similarity=0.281 Sum_probs=17.2
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHH
Q 048393 339 NEILEGERGKEIKQNADKWRNFAKEA 364 (369)
Q Consensus 339 ~~~l~~~~~~~~~~~a~~l~~~~~~~ 364 (369)
.+++.++ .+++.++++++.+.++
T Consensus 8 ~k~i~eK---~Fke~MRelkD~LSe~ 30 (67)
T PHA02754 8 PKAIMEK---DFKEAMRELKDILSEA 30 (67)
T ss_pred HHHHHHh---HHHHHHHHHHHHHhhC
Confidence 3444566 7999999999888764
No 303
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=26.33 E-value=4.5e+02 Score=23.09 Aligned_cols=47 Identities=9% Similarity=0.079 Sum_probs=32.7
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEE
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWV 235 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~ 235 (369)
.+.+.+++.. .+.++||-..|........++...++++..+..+...
T Consensus 21 ~~~~~~~~~~--~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l 67 (233)
T PRK05282 21 LPLIAELLAG--RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGI 67 (233)
T ss_pred HHHHHHHHcC--CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 4456666663 3449999888766444556788889999988876533
No 304
>TIGR02836 spore_IV_A stage IV sporulation protein A. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis.
Probab=26.17 E-value=2.2e+02 Score=27.69 Aligned_cols=74 Identities=18% Similarity=0.255 Sum_probs=47.9
Q ss_pred Hhhc-ccCcCceeecCCh--------------hhHHHHHhhCCceeecC-----CCCChhHHHHHHHhhcCce-EEecCC
Q 048393 266 GVLA-HEATGCFLTHCGW--------------NSTMEALGLGVPMLAMP-----QWSDQSTNAKYIMDVGKMG-LKVPAD 324 (369)
Q Consensus 266 ~iL~-~~~~~~~I~hgG~--------------~s~~eal~~GvP~i~~P-----~~~dQ~~na~~~~~~~g~g-~~~~~~ 324 (369)
.++. |++++++||-.|. ..+.|--..|+|.|++= ...+...-+..+++..++- +.++-.
T Consensus 139 kVI~dhstIgivVtTDgsi~dI~Re~y~~aEe~~i~eLk~~~kPfiivlN~~dp~~~et~~l~~~l~eky~vpvl~v~c~ 218 (492)
T TIGR02836 139 KVIQEHSTIGVVVTTDGTITDIPREDYVEAEERVIEELKELNKPFIILLNSTHPYHPETEALRQELEEKYDVPVLAMDVE 218 (492)
T ss_pred HHHHhcCcEEEEEEcCCCccccccccchHHHHHHHHHHHhcCCCEEEEEECcCCCCchhHHHHHHHHHHhCCceEEEEHH
Confidence 5667 9999999995442 24555567899998763 3333333333444332654 444544
Q ss_pred CCCCcCHHHHHHHHHHHh
Q 048393 325 EKGIVRREAIAHCINEIL 342 (369)
Q Consensus 325 ~~~~~~~~~l~~~i~~~l 342 (369)
+++.+++.+.++++|
T Consensus 219 ---~l~~~DI~~il~~vL 233 (492)
T TIGR02836 219 ---SMRESDILSVLEEVL 233 (492)
T ss_pred ---HcCHHHHHHHHHHHH
Confidence 789999999888886
No 305
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=25.99 E-value=1.5e+02 Score=28.50 Aligned_cols=40 Identities=10% Similarity=0.159 Sum_probs=28.1
Q ss_pred cHHHHHHHHHhcCCCCEEEECCCcc-------h---HHHHHHHhCCCcEEE
Q 048393 21 GLQTFTELVERMNDVDCIVYDSFLP-------W---ALDVAKKFGLTGAAF 61 (369)
Q Consensus 21 ~~~~l~~ll~~~~~~D~vI~D~~~~-------~---~~~~A~~lgiP~v~~ 61 (369)
....+.++++.. +||++|+-+.+- | +..+.++++||.++-
T Consensus 64 a~~~i~~mv~k~-~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vta 113 (431)
T TIGR01917 64 AKAKVLEMIKGA-NPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTA 113 (431)
T ss_pred HHHHHHHHHHhc-CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 334556667777 999999998862 1 223567899998874
No 306
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=25.96 E-value=1e+02 Score=26.55 Aligned_cols=42 Identities=17% Similarity=0.186 Sum_probs=26.3
Q ss_pred HcHHHHHHHHHhcC-CCCEEEECCCc-------chHHHHHHHhCCCcEEE
Q 048393 20 IGLQTFTELVERMN-DVDCIVYDSFL-------PWALDVAKKFGLTGAAF 61 (369)
Q Consensus 20 ~~~~~l~~ll~~~~-~~D~vI~D~~~-------~~~~~~A~~lgiP~v~~ 61 (369)
.-.+.+.++++.+. ++|+|++|-+. -.|..++-.+++|+|.+
T Consensus 74 RE~P~~l~~l~~l~~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGV 123 (206)
T PF04493_consen 74 RELPCILEALEKLKNKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGV 123 (206)
T ss_dssp GTHHHHHHHHHTSSS--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEE
T ss_pred hhHHHHHHHHHHhcccCCEEEEeCceeecCCCcChhheeeeccCCCEEEE
Confidence 34466677777766 89999999764 22455677778998885
No 307
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=25.94 E-value=70 Score=29.35 Aligned_cols=37 Identities=19% Similarity=0.159 Sum_probs=30.3
Q ss_pred HhhcccCcCceeecCChhhHHHHHh----hCCceeecCCCC
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALG----LGVPMLAMPQWS 302 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~----~GvP~i~~P~~~ 302 (369)
+.|..-+++.+|.=||-+|+..|.. +++|+|++|-..
T Consensus 85 ~~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTI 125 (301)
T TIGR02482 85 ENLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTI 125 (301)
T ss_pred HHHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeecccc
Confidence 4567778888999999999977753 799999999653
No 308
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=25.82 E-value=1.5e+02 Score=28.45 Aligned_cols=40 Identities=10% Similarity=0.154 Sum_probs=28.0
Q ss_pred cHHHHHHHHHhcCCCCEEEECCCcc-------h---HHHHHHHhCCCcEEE
Q 048393 21 GLQTFTELVERMNDVDCIVYDSFLP-------W---ALDVAKKFGLTGAAF 61 (369)
Q Consensus 21 ~~~~l~~ll~~~~~~D~vI~D~~~~-------~---~~~~A~~lgiP~v~~ 61 (369)
....+.++++.. +||++|+-+.+- | +..+.++++||.++-
T Consensus 64 a~~~i~~mv~k~-~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~ 113 (431)
T TIGR01918 64 AVARVLEMLKDK-EPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTS 113 (431)
T ss_pred HHHHHHHHHHhc-CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 334555666677 999999998862 1 223567899998874
No 309
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=25.81 E-value=1.2e+02 Score=26.56 Aligned_cols=32 Identities=25% Similarity=0.278 Sum_probs=23.1
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| +||.|+.- ..+..=|.++|||+|++.-+.
T Consensus 155 ~Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDTn 188 (225)
T TIGR01011 155 LPDLLFVIDPVKEKIAVAEARKLGIPVVAIVDTN 188 (225)
T ss_pred CCCEEEEeCCCccHHHHHHHHHcCCCEEEEeeCC
Confidence 688 55566654 445556999999999986655
No 310
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=25.70 E-value=1.2e+02 Score=26.84 Aligned_cols=32 Identities=19% Similarity=0.080 Sum_probs=23.7
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| +||+|+.. .-+..=|.++|||+|++.-+.
T Consensus 118 ~P~llIV~Dp~~d~qAI~EA~~lnIPvIal~DTd 151 (249)
T PTZ00254 118 EPRLLIVTDPRTDHQAIREASYVNIPVIALCDTD 151 (249)
T ss_pred CCCEEEEeCCCcchHHHHHHHHhCCCEEEEecCC
Confidence 577 66677766 335556999999999987665
No 311
>CHL00099 ilvB acetohydroxyacid synthase large subunit
Probab=25.69 E-value=2.2e+02 Score=28.78 Aligned_cols=26 Identities=23% Similarity=0.301 Sum_probs=22.0
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.+|...++|+|++-
T Consensus 78 gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 109 (585)
T CHL00099 78 GVCFATSGPGATNLVTGIATAQMDSVPLLVIT 109 (585)
T ss_pred EEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 4488998877 7888999999999985
No 312
>PRK13055 putative lipid kinase; Reviewed
Probab=25.64 E-value=2.6e+02 Score=25.89 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=21.4
Q ss_pred ceeecCChhhHHHHHhh------CCceeecCC
Q 048393 275 CFLTHCGWNSTMEALGL------GVPMLAMPQ 300 (369)
Q Consensus 275 ~~I~hgG~~s~~eal~~------GvP~i~~P~ 300 (369)
.+|--||=||+.|++.. .+|+-++|.
T Consensus 62 ~vvv~GGDGTl~evvngl~~~~~~~~LgiiP~ 93 (334)
T PRK13055 62 LIIAAGGDGTINEVVNGIAPLEKRPKMAIIPA 93 (334)
T ss_pred EEEEECCCCHHHHHHHHHhhcCCCCcEEEECC
Confidence 39999999999998743 467888996
No 313
>COG1691 NCAIR mutase (PurE)-related proteins [General function prediction only]
Probab=25.63 E-value=2.4e+02 Score=24.71 Aligned_cols=80 Identities=16% Similarity=0.163 Sum_probs=52.7
Q ss_pred eE-EEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccC--hHHhhcccCcCceee
Q 048393 202 VV-YVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCP--QLGVLAHEATGCFLT 278 (369)
Q Consensus 202 ~i-~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~iL~~~~~~~~I~ 278 (369)
+| .++-||.- ....++....++..|..+.-.++-.- .+ +.+-++ +......+++ +|-
T Consensus 119 ~vgvlsAGTSD---lPvAeEa~~tae~lG~ev~~~~DvGV-----AG----------iHRLl~~l~r~~~~~~~~--lIV 178 (254)
T COG1691 119 KVGVLSAGTSD---LPVAEEAAVTAEELGVEVQKVYDVGV-----AG----------IHRLLSALKRLKIEDADV--LIV 178 (254)
T ss_pred eEEEEecCCCC---cchHHHHHHHHHHhCceEEEEEeecc-----ch----------HHhhhhHHHHHHhhCCCe--EEE
Confidence 45 88888874 45666666667777877664443220 01 233344 4455566666 999
Q ss_pred cCChhhHHHHHhhC---CceeecCCC
Q 048393 279 HCGWNSTMEALGLG---VPMLAMPQW 301 (369)
Q Consensus 279 hgG~~s~~eal~~G---vP~i~~P~~ 301 (369)
-.|+-..+-++.+| +|+|.+|..
T Consensus 179 vAGMEGaLPsvvagLvD~PVIavPTs 204 (254)
T COG1691 179 VAGMEGALPSVVAGLVDVPVIAVPTS 204 (254)
T ss_pred EcccccchHHHHHhccCCCeEecccc
Confidence 99998887777765 899999975
No 314
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=25.52 E-value=3.6e+02 Score=22.81 Aligned_cols=68 Identities=16% Similarity=0.155 Sum_probs=40.6
Q ss_pred HHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHH
Q 048393 147 EWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLK 226 (369)
Q Consensus 147 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~ 226 (369)
..+...|+.+++.|+-.| .+++.+-......+ +|.+|.-.. .....+..+++.++
T Consensus 104 ~~l~~~G~~vi~lG~~~p----------------------~~~l~~~~~~~~~d-~v~lS~~~~--~~~~~~~~~i~~lr 158 (201)
T cd02070 104 TMLEANGFEVIDLGRDVP----------------------PEEFVEAVKEHKPD-ILGLSALMT--TTMGGMKEVIEALK 158 (201)
T ss_pred HHHHHCCCEEEECCCCCC----------------------HHHHHHHHHHcCCC-EEEEecccc--ccHHHHHHHHHHHH
Confidence 446666788888886543 44555544443222 665554333 34567888888888
Q ss_pred hCCC--cEEEEEeCC
Q 048393 227 ASDK--YFLWVVRES 239 (369)
Q Consensus 227 ~~~~--~~i~~~~~~ 239 (369)
+.+. .+.+.+|+.
T Consensus 159 ~~~~~~~~~i~vGG~ 173 (201)
T cd02070 159 EAGLRDKVKVMVGGA 173 (201)
T ss_pred HCCCCcCCeEEEECC
Confidence 7765 554555554
No 315
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=25.38 E-value=3e+02 Score=20.76 Aligned_cols=68 Identities=18% Similarity=0.116 Sum_probs=39.5
Q ss_pred HHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHH
Q 048393 147 EWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLK 226 (369)
Q Consensus 147 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~ 226 (369)
..+...++.+.+.|+-.+ .+++.+.+.....+ +|.+|.- ..........+++.++
T Consensus 21 ~~l~~~G~~V~~lg~~~~----------------------~~~l~~~~~~~~pd-vV~iS~~--~~~~~~~~~~~i~~l~ 75 (119)
T cd02067 21 RALRDAGFEVIDLGVDVP----------------------PEEIVEAAKEEDAD-AIGLSGL--LTTHMTLMKEVIEELK 75 (119)
T ss_pred HHHHHCCCEEEECCCCCC----------------------HHHHHHHHHHcCCC-EEEEecc--ccccHHHHHHHHHHHH
Confidence 345566777877785433 55666666554332 5555433 2234566778888888
Q ss_pred hCCC-cEEEEEeCC
Q 048393 227 ASDK-YFLWVVRES 239 (369)
Q Consensus 227 ~~~~-~~i~~~~~~ 239 (369)
+.+. .+.+.+++.
T Consensus 76 ~~~~~~~~i~vGG~ 89 (119)
T cd02067 76 EAGLDDIPVLVGGA 89 (119)
T ss_pred HcCCCCCeEEEECC
Confidence 7654 555555554
No 316
>PRK12474 hypothetical protein; Provisional
Probab=25.16 E-value=2.1e+02 Score=28.44 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=20.6
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.+|...++|+|++-
T Consensus 70 gv~~~t~GpG~~N~~~gl~~A~~d~~Pvl~i~ 101 (518)
T PRK12474 70 AVTLLHLGPGLANGLANLHNARRAASPIVNIV 101 (518)
T ss_pred EEEEEccchhHhHhHHHHHHHhhcCCCEEEEe
Confidence 3388888877 5667888999999874
No 317
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=25.09 E-value=1.7e+02 Score=26.32 Aligned_cols=29 Identities=17% Similarity=0.209 Sum_probs=23.1
Q ss_pred CCCEEEECCCc--chHHHHHHHhCCCcEEEc
Q 048393 34 DVDCIVYDSFL--PWALDVAKKFGLTGAAFL 62 (369)
Q Consensus 34 ~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~ 62 (369)
++|+|+.=..- +.|..+|..+|+|.+..-
T Consensus 128 ~iD~VvgvetkGIpLA~avA~~L~vp~vivR 158 (268)
T TIGR01743 128 EIDAVMTVATKGIPLAYAVASVLNVPLVIVR 158 (268)
T ss_pred CCCEEEEEccchHHHHHHHHHHHCCCEEEEE
Confidence 78988875443 778889999999988753
No 318
>PRK13059 putative lipid kinase; Reviewed
Probab=24.97 E-value=2.1e+02 Score=26.04 Aligned_cols=26 Identities=15% Similarity=0.279 Sum_probs=21.4
Q ss_pred ceeecCChhhHHHHH---h---hCCceeecCC
Q 048393 275 CFLTHCGWNSTMEAL---G---LGVPMLAMPQ 300 (369)
Q Consensus 275 ~~I~hgG~~s~~eal---~---~GvP~i~~P~ 300 (369)
.+|.-||=||+.|++ . .++|+-++|.
T Consensus 59 ~vi~~GGDGTv~evv~gl~~~~~~~~lgviP~ 90 (295)
T PRK13059 59 YILIAGGDGTVDNVVNAMKKLNIDLPIGILPV 90 (295)
T ss_pred EEEEECCccHHHHHHHHHHhcCCCCcEEEECC
Confidence 399999999998885 2 3588999996
No 319
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=24.88 E-value=77 Score=30.99 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=27.2
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 24 TFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
.+.+.+++. +||++|.... ...+|+++|||++.+
T Consensus 386 e~~~~i~~~-~pDllig~~~---~~~~a~k~gip~~~~ 419 (457)
T TIGR01284 386 ELEEIIEKY-KPDIILTGIR---EGELAKKLGVPYINI 419 (457)
T ss_pred HHHHHHHhc-CCCEEEecCC---cchhhhhcCCCEEEc
Confidence 455666666 8999998876 677899999998875
No 320
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=24.85 E-value=1.7e+02 Score=24.16 Aligned_cols=31 Identities=16% Similarity=0.236 Sum_probs=22.1
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHhC
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKAS 228 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~ 228 (369)
+.+..+|+++||........++..++.|.+.
T Consensus 5 ~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 5 PASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CcCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 4455899999999754555677777777653
No 321
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.83 E-value=1.7e+02 Score=24.10 Aligned_cols=32 Identities=19% Similarity=0.160 Sum_probs=24.7
Q ss_pred CCCEEEECCCc----------chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVDCIVYDSFL----------PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D~vI~D~~~----------~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.||+|++--.. .-+..+|+++|+|++-.+.++
T Consensus 124 ~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETSA~t 165 (219)
T KOG0081|consen 124 NPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETSACT 165 (219)
T ss_pred CCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeecccc
Confidence 89999987653 236678999999998766655
No 322
>COG2405 Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]
Probab=24.79 E-value=1.6e+02 Score=23.57 Aligned_cols=50 Identities=20% Similarity=0.156 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHcHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 9 SNQAYVDRFWKIGLQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
++...++.-...++...-++--+. +.|.++.|-.. |...|..+|++++..
T Consensus 63 ~lv~~lre~Ld~GEa~aIALA~e~-~ad~Ll~Ddr~--aR~~A~~lgL~V~Gt 112 (157)
T COG2405 63 DLVNLLREKLDKGEAEAIALALEL-KADLLLMDDRD--ARNVAKSLGLKVTGT 112 (157)
T ss_pred HHHHHHHHhcccchHHHHHHHHHc-CCCeeeeccHH--HHHHHHHcCCeeeeh
Confidence 445555555566666666666566 89999999764 889999999998874
No 323
>PRK07524 hypothetical protein; Provisional
Probab=24.77 E-value=1.8e+02 Score=28.96 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=20.7
Q ss_pred ceeecCChh------hHHHHHhhCCceeecC
Q 048393 275 CFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 275 ~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++.|.|.| .+.+|-..++|+|++-
T Consensus 67 v~~~t~GpG~~n~~~gi~~A~~~~~Pvl~i~ 97 (535)
T PRK07524 67 VCFIITGPGMTNIATAMGQAYADSIPMLVIS 97 (535)
T ss_pred EEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 388888876 6788899999999873
No 324
>PRK11914 diacylglycerol kinase; Reviewed
Probab=24.72 E-value=1.9e+02 Score=26.40 Aligned_cols=81 Identities=12% Similarity=0.033 Sum_probs=45.5
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCC
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCG 281 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG 281 (369)
.++++--|-.......+.++.+.|++.+..+........ ... ...+ ........++ +|.-||
T Consensus 12 ~iI~NP~sG~g~~~~~~~~~~~~l~~~g~~~~~~~t~~~-----~~~----------~~~a-~~~~~~~~d~--vvv~GG 73 (306)
T PRK11914 12 TVLTNPLSGHGAAPHAAERAIARLHHRGVDVVEIVGTDA-----HDA----------RHLV-AAALAKGTDA--LVVVGG 73 (306)
T ss_pred EEEECCCCCCCcHHHHHHHHHHHHHHcCCeEEEEEeCCH-----HHH----------HHHH-HHHHhcCCCE--EEEECC
Confidence 444544443333345566777888877766543322210 000 0000 0111223455 999999
Q ss_pred hhhHHHHHh----hCCceeecCC
Q 048393 282 WNSTMEALG----LGVPMLAMPQ 300 (369)
Q Consensus 282 ~~s~~eal~----~GvP~i~~P~ 300 (369)
=||+.|++. .++|+-++|.
T Consensus 74 DGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 74 DGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred chHHHHHhHHhccCCCcEEEEeC
Confidence 999999873 4789999996
No 325
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=24.55 E-value=3.7e+02 Score=23.15 Aligned_cols=68 Identities=13% Similarity=0.202 Sum_probs=42.0
Q ss_pred HHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHH
Q 048393 147 EWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLK 226 (369)
Q Consensus 147 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~ 226 (369)
..+...|+.+++.|+-.| .+++.+.....+.+ +|.+|+ ........++.+++.|+
T Consensus 110 ~~l~~~G~~Vi~LG~~vp----------------------~e~~v~~~~~~~~~-~V~lS~--~~~~~~~~~~~~i~~L~ 164 (213)
T cd02069 110 VILSNNGYEVIDLGVMVP----------------------IEKILEAAKEHKAD-IIGLSG--LLVPSLDEMVEVAEEMN 164 (213)
T ss_pred HHHHhCCCEEEECCCCCC----------------------HHHHHHHHHHcCCC-EEEEcc--chhccHHHHHHHHHHHH
Confidence 446667888999997654 44555555443222 555543 33345667888888888
Q ss_pred hCCCcEEEEEeCC
Q 048393 227 ASDKYFLWVVRES 239 (369)
Q Consensus 227 ~~~~~~i~~~~~~ 239 (369)
+.+.++-+.+|+.
T Consensus 165 ~~~~~~~i~vGG~ 177 (213)
T cd02069 165 RRGIKIPLLIGGA 177 (213)
T ss_pred hcCCCCeEEEECh
Confidence 7766665555653
No 326
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=24.12 E-value=1.2e+02 Score=26.11 Aligned_cols=41 Identities=17% Similarity=0.230 Sum_probs=27.4
Q ss_pred HHHHHHHHhcCCCCEEEECCCc--chHHHHHHHhCCCcEEEcccc
Q 048393 23 QTFTELVERMNDVDCIVYDSFL--PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~ 65 (369)
..++.+++. +||+||..... .-...-....++|++.+....
T Consensus 51 ~~~E~i~~l--~PDlIi~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 93 (238)
T PF01497_consen 51 PNLEAILAL--KPDLIIGSSFYGQSEEIEKLLEAGIPVVVFDSSS 93 (238)
T ss_dssp B-HHHHHHT----SEEEEETTSSCHHHHHHHHHTTSEEEEESSTT
T ss_pred ccHHHHHhC--CCCEEEEeccccchHHHHHHhcccceEEEeeccc
Confidence 355665544 89999988777 445556677799999987765
No 327
>PRK13243 glyoxylate reductase; Reviewed
Probab=24.07 E-value=2.7e+02 Score=25.88 Aligned_cols=66 Identities=15% Similarity=0.228 Sum_probs=39.2
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+.+|.+|.++ +.+++.+...+.+++. +...... ..... .-..+....++++.+|+ ++.
T Consensus 150 gktvgIiG~G~IG-------~~vA~~l~~~G~~V~~-~d~~~~~----~~~~~-----~~~~~~~l~ell~~aDi--V~l 210 (333)
T PRK13243 150 GKTIGIIGFGRIG-------QAVARRAKGFGMRILY-YSRTRKP----EAEKE-----LGAEYRPLEELLRESDF--VSL 210 (333)
T ss_pred CCEEEEECcCHHH-------HHHHHHHHHCCCEEEE-ECCCCCh----hhHHH-----cCCEecCHHHHHhhCCE--EEE
Confidence 4559999999987 4556666667777653 3322110 00000 00134566789999998 888
Q ss_pred cCChh
Q 048393 279 HCGWN 283 (369)
Q Consensus 279 hgG~~ 283 (369)
|.-.+
T Consensus 211 ~lP~t 215 (333)
T PRK13243 211 HVPLT 215 (333)
T ss_pred eCCCC
Confidence 87543
No 328
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.93 E-value=1.2e+02 Score=26.63 Aligned_cols=36 Identities=19% Similarity=0.102 Sum_probs=0.0
Q ss_pred HHHHhcCCCCEEEECCCcch---HHHHHHHhCCCcEEEcc
Q 048393 27 ELVERMNDVDCIVYDSFLPW---ALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~~---~~~~A~~lgiP~v~~~~ 63 (369)
+.|..+ +||+||....... ...+.+..|+|++.+..
T Consensus 68 E~i~~l-~PDLIi~~~~~~~~~~~~~l~~~~gipvv~~~~ 106 (262)
T cd01147 68 EKIAAL-KPDVVIDVGSDDPTSIADDLQKKTGIPVVVLDG 106 (262)
T ss_pred HHHHhc-CCCEEEEecCCccchhHHHHHHhhCCCEEEEec
No 329
>PRK08273 thiamine pyrophosphate protein; Provisional
Probab=23.76 E-value=4.9e+02 Score=26.42 Aligned_cols=27 Identities=26% Similarity=0.271 Sum_probs=21.9
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
++++++|.|.| .+.+|-..++|+|++.
T Consensus 68 ~gv~~~t~GPG~~n~~~gi~~A~~d~vPvl~I~ 100 (597)
T PRK08273 68 VGVCLATSGPGAIHLLNGLYDAKLDHVPVVAIV 100 (597)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 44488888776 6788899999999885
No 330
>PLN02928 oxidoreductase family protein
Probab=23.70 E-value=3.4e+02 Score=25.43 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=40.2
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCC-----CCcchhcccCCCcEEEeccChHHhhcccCc
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSK-----LPENFSDETSQKGLVVNWCPQLGVLAHEAT 273 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~ 273 (369)
.+.+.+|.+|+++ +.+++.+...|.+|+..-....... ++......... ....+....++|+.+|+
T Consensus 159 gktvGIiG~G~IG-------~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~ell~~aDi 229 (347)
T PLN02928 159 GKTVFILGYGAIG-------IELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVD--EKGGHEDIYEFAGEADI 229 (347)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhCCCEEEEECCCCChhhhhhhcccccccccccc--ccCcccCHHHHHhhCCE
Confidence 3558899999987 4556666677888765422111000 00000000000 01145556689999999
Q ss_pred CceeecCChh
Q 048393 274 GCFLTHCGWN 283 (369)
Q Consensus 274 ~~~I~hgG~~ 283 (369)
++.|+-.+
T Consensus 230 --Vvl~lPlt 237 (347)
T PLN02928 230 --VVLCCTLT 237 (347)
T ss_pred --EEECCCCC
Confidence 99887543
No 331
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=23.13 E-value=4.4e+02 Score=22.27 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=40.8
Q ss_pred HHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHH
Q 048393 147 EWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLK 226 (369)
Q Consensus 147 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~ 226 (369)
..+...++.+++.|+-.| .+++.+-+.....+ +|-+|.-. ......+..+++.++
T Consensus 106 ~~l~~~G~~vi~LG~~vp----------------------~e~~v~~~~~~~pd-~v~lS~~~--~~~~~~~~~~i~~l~ 160 (197)
T TIGR02370 106 TMLRANGFDVIDLGRDVP----------------------IDTVVEKVKKEKPL-MLTGSALM--TTTMYGQKDINDKLK 160 (197)
T ss_pred HHHHhCCcEEEECCCCCC----------------------HHHHHHHHHHcCCC-EEEEcccc--ccCHHHHHHHHHHHH
Confidence 445666788999998655 44454444443222 56555432 334566788888898
Q ss_pred hCCC--cEEEEEeCC
Q 048393 227 ASDK--YFLWVVRES 239 (369)
Q Consensus 227 ~~~~--~~i~~~~~~ 239 (369)
+.+. ++-+.+|+.
T Consensus 161 ~~~~~~~v~i~vGG~ 175 (197)
T TIGR02370 161 EEGYRDSVKFMVGGA 175 (197)
T ss_pred HcCCCCCCEEEEECh
Confidence 8743 355555653
No 332
>PF01995 DUF128: Domain of unknown function DUF128; InterPro: IPR002846 These archaebacterial proteins have no known function. The domain is found duplicated in some sequences.; PDB: 3NEK_B.
Probab=23.12 E-value=3.6e+02 Score=23.76 Aligned_cols=80 Identities=16% Similarity=0.147 Sum_probs=47.9
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
..+.|+.++=.+.....+.++++++.+++.+..-+..++.....-+- +.+- ..-.+++.
T Consensus 144 G~G~ilAn~ReiP~~a~e~~~~il~~l~~~g~~Gil~iG~p~~~vlg----------vpv~-----------~~~~Giv~ 202 (236)
T PF01995_consen 144 GEGKILANFREIPMSAREKAEEILEKLEKAGFSGILEIGEPNEPVLG----------VPVE-----------PGMVGIVV 202 (236)
T ss_dssp SSSEEEEEEEEEETTTHHHHHHHHHHH---T-TTEEEE--TT--BTT----------B--------------TTEEEEEE
T ss_pred CCceEeeeeecCchhHHHHHHHHHHHhhhcccceeEEeCCCCCcccC----------CccC-----------CCeEEEEE
Confidence 45688888888888888999999999999998877777764221110 0111 11123677
Q ss_pred cCChhhHHHHHhhCCceeecC
Q 048393 279 HCGWNSTMEALGLGVPMLAMP 299 (369)
Q Consensus 279 hgG~~s~~eal~~GvP~i~~P 299 (369)
=||.|-++-+...|.|+=.-+
T Consensus 203 ~GG~Npia~~~E~Gi~i~~~~ 223 (236)
T PF01995_consen 203 IGGLNPIAAAVEAGIPIEIKA 223 (236)
T ss_dssp E-TTHHHHHHHHTT---EEEE
T ss_pred EecCcHHHHHHHcCCeeEeee
Confidence 799999999999999876544
No 333
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=23.10 E-value=8e+02 Score=24.88 Aligned_cols=85 Identities=11% Similarity=0.226 Sum_probs=41.2
Q ss_pred CceeecCChhhHHHHHh---hCCceeecCCCCCh--hHHHHHHHhhcCc--eEE---ecCCCCCCcCHHHHHHHHHHHhc
Q 048393 274 GCFLTHCGWNSTMEALG---LGVPMLAMPQWSDQ--STNAKYIMDVGKM--GLK---VPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 274 ~~~I~hgG~~s~~eal~---~GvP~i~~P~~~dQ--~~na~~~~~~~g~--g~~---~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
++||.=.|.-.-+-.+. .-+|+|.+|....- -.+| .+.-. ++ |+- +..+ +..++.-+...|.. +.
T Consensus 467 ~v~i~~ag~~~~l~~~~a~~t~~pvi~vp~~~~~~~g~~~-l~s~~-~~p~g~pv~~v~i~--~~~~aa~~a~~i~~-~~ 541 (577)
T PLN02948 467 QVIIAGAGGAAHLPGMVASMTPLPVIGVPVKTSHLDGLDS-LLSIV-QMPRGVPVATVAIG--NATNAGLLAVRMLG-AS 541 (577)
T ss_pred CEEEEEcCccccchHHHhhccCCCEEEcCCCCCCCCcHHH-HHHHh-cCCCCCeEEEEecC--ChHHHHHHHHHHHh-cC
Confidence 44888777654333332 35799999985321 1122 11112 23 421 1111 02344444433322 25
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHh
Q 048393 344 GERGKEIKQNADKWRNFAKEAVA 366 (369)
Q Consensus 344 ~~~~~~~~~~a~~l~~~~~~~~~ 366 (369)
|+ .++++.+..++.+++.+.
T Consensus 542 ~~---~~~~~~~~~~~~~~~~~~ 561 (577)
T PLN02948 542 DP---DLLDKMEAYQEDMRDMVL 561 (577)
T ss_pred CH---HHHHHHHHHHHHHHHHHH
Confidence 55 677777777666666543
No 334
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=23.07 E-value=6.5e+02 Score=23.83 Aligned_cols=40 Identities=10% Similarity=0.190 Sum_probs=28.0
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHH-HhCCCcEEEcccc
Q 048393 24 TFTELVERMNDVDCIVYDSFLPWALDVAK-KFGLTGAAFLTQS 65 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~~~~~A~-~lgiP~v~~~~~~ 65 (369)
.++++++- +||+-|=..-+++.+.+-+ .-++|++++..-+
T Consensus 142 ~~Eai~r~--~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP 182 (465)
T KOG1387|consen 142 AFEAIIRF--PPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYP 182 (465)
T ss_pred HHHHHHhC--CchheEecCCCcchhHHHHHHccCceEEEEecc
Confidence 55666644 7888776666677777666 5599999975544
No 335
>PLN02293 adenine phosphoribosyltransferase
Probab=23.05 E-value=2.6e+02 Score=23.60 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=26.2
Q ss_pred cHHHHHHHHHhcCCCCEEEECCCc--chHHHHHHHhCCCcEEE
Q 048393 21 GLQTFTELVERMNDVDCIVYDSFL--PWALDVAKKFGLTGAAF 61 (369)
Q Consensus 21 ~~~~l~~ll~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~ 61 (369)
..+.+.+.+++. ++|+|+.=... ++|..+|..+|+|++..
T Consensus 50 ~~~~l~~~~~~~-~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~ 91 (187)
T PLN02293 50 TIDLFVERYRDM-GISVVAGIEARGFIFGPPIALAIGAKFVPL 91 (187)
T ss_pred HHHHHHHHHhhc-CCCEEEEeCCCchHHHHHHHHHHCCCEEEE
Confidence 333444444444 78888764432 67888999999997753
No 336
>cd01977 Nitrogenase_VFe_alpha Nitrogenase_VFe_alpha -like: Nitrogenase VFe protein, alpha subunit like. This group contains proteins similar to the alpha subunits of, the VFe protein of the vanadium-dependent (V-) nitrogenase and the FeFe protein of the iron only (Fe-) nitrogenase Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V- and Fe- nitrogenases there is a molybdenum (Mo)-dependent nitrogenase which is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha sub
Probab=22.74 E-value=88 Score=30.11 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=25.0
Q ss_pred HHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 25 FTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 25 l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
+.+.+++. ++|++|.... ...+|+++|||++.+
T Consensus 350 ~~~~~~~~-~pdliig~s~---~~~~a~~lgip~~~~ 382 (415)
T cd01977 350 FFEILEML-KPDIILTGPR---VGELVKKLHVPYVNI 382 (415)
T ss_pred HHHHHHhc-CCCEEEecCc---cchhhhhcCCCEEec
Confidence 33445555 8999998876 557899999998875
No 337
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=22.65 E-value=2.7e+02 Score=21.96 Aligned_cols=68 Identities=10% Similarity=-0.029 Sum_probs=39.6
Q ss_pred HHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHH
Q 048393 147 EWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLK 226 (369)
Q Consensus 147 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~ 226 (369)
..+.+.++.++..|...+. .+-++.-.+.. .-.|.+++........++++++.|+
T Consensus 21 ~~L~~~GfeVidLG~~v~~---------------------e~~v~aa~~~~----adiVglS~L~t~~~~~~~~~~~~l~ 75 (128)
T cd02072 21 HAFTEAGFNVVNLGVLSPQ---------------------EEFIDAAIETD----ADAILVSSLYGHGEIDCKGLREKCD 75 (128)
T ss_pred HHHHHCCCEEEECCCCCCH---------------------HHHHHHHHHcC----CCEEEEeccccCCHHHHHHHHHHHH
Confidence 3466777888888865432 22222333322 2334444555556677888888888
Q ss_pred hCCC-cEEEEEeCC
Q 048393 227 ASDK-YFLWVVRES 239 (369)
Q Consensus 227 ~~~~-~~i~~~~~~ 239 (369)
+.+. .+.+.+++.
T Consensus 76 ~~gl~~v~vivGG~ 89 (128)
T cd02072 76 EAGLKDILLYVGGN 89 (128)
T ss_pred HCCCCCCeEEEECC
Confidence 7764 566666654
No 338
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=22.49 E-value=1.6e+02 Score=26.18 Aligned_cols=41 Identities=17% Similarity=0.394 Sum_probs=30.6
Q ss_pred cHHHHHHHHHhcCCCCEEEECCCcchHHH-------HHHHhCCCcEEEcc
Q 048393 21 GLQTFTELVERMNDVDCIVYDSFLPWALD-------VAKKFGLTGAAFLT 63 (369)
Q Consensus 21 ~~~~l~~ll~~~~~~D~vI~D~~~~~~~~-------~A~~lgiP~v~~~~ 63 (369)
....+.+++++. ++++| .|+..++|.. +|+.+|||++.|--
T Consensus 54 ~~~~l~~~l~~~-~i~~v-IDATHPfA~~is~na~~a~~~~~ipylR~eR 101 (249)
T PF02571_consen 54 DEEGLAEFLREN-GIDAV-IDATHPFAAEISQNAIEACRELGIPYLRFER 101 (249)
T ss_pred CHHHHHHHHHhC-CCcEE-EECCCchHHHHHHHHHHHHhhcCcceEEEEc
Confidence 567888899887 78654 5777777655 47888999998744
No 339
>TIGR01504 glyox_carbo_lig glyoxylate carboligase. Glyoxylate carboligase, also called tartronate-semialdehyde synthase, releases CO2 while synthesizing a single molecule of tartronate semialdehyde from two molecules of glyoxylate. It is a thiamine pyrophosphate-dependent enzyme, closely related in sequence to the large subunit of acetolactate synthase. In the D-glycerate pathway, part of allantoin degradation in the Enterobacteriaceae, tartronate semialdehyde is converted to D-glycerate and then 3-phosphoglycerate, a product of glycolysis and entry point in the general metabolism.
Probab=22.43 E-value=3.6e+02 Score=27.35 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=20.7
Q ss_pred cCceeecCCh------hhHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGW------NSTMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~------~s~~eal~~GvP~i~~P 299 (369)
.+++++|.|. +.+.+|-..++|||++-
T Consensus 68 ~gv~~~t~GpG~~N~~~gla~A~~~~~Pvl~I~ 100 (588)
T TIGR01504 68 IGVCIGTSGPAGTDMITGLYSASADSIPILCIT 100 (588)
T ss_pred eEEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4447777665 57788899999999984
No 340
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=22.24 E-value=4.6e+02 Score=21.81 Aligned_cols=29 Identities=17% Similarity=0.198 Sum_probs=19.0
Q ss_pred hCCceeecCCCC----C---hhHHHHHHHhhcCceEE
Q 048393 291 LGVPMLAMPQWS----D---QSTNAKYIMDVGKMGLK 320 (369)
Q Consensus 291 ~GvP~i~~P~~~----d---Q~~na~~~~~~~g~g~~ 320 (369)
.++|+++.|-.. + -..|.+.+++. |+-+.
T Consensus 111 ~~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~-G~~vi 146 (177)
T TIGR02113 111 PETPKLIAPAMNTKMYQNPITQRNIKILKKI-GYQEI 146 (177)
T ss_pred CCCCEEEEeCCCHHHhCCHHHHHHHHHHHHC-CCEEE
Confidence 389999999422 2 23477777777 76544
No 341
>PLN03139 formate dehydrogenase; Provisional
Probab=22.20 E-value=3.3e+02 Score=25.99 Aligned_cols=68 Identities=13% Similarity=0.053 Sum_probs=38.6
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+-+|.+|.++ +.+++.+...+.+++. +.... .+...... .++ .......++++.+|+ ++.
T Consensus 199 gktVGIVG~G~IG-------~~vA~~L~afG~~V~~-~d~~~---~~~~~~~~--~g~--~~~~~l~ell~~sDv--V~l 261 (386)
T PLN03139 199 GKTVGTVGAGRIG-------RLLLQRLKPFNCNLLY-HDRLK---MDPELEKE--TGA--KFEEDLDAMLPKCDV--VVI 261 (386)
T ss_pred CCEEEEEeecHHH-------HHHHHHHHHCCCEEEE-ECCCC---cchhhHhh--cCc--eecCCHHHHHhhCCE--EEE
Confidence 4558899999987 4556666667888754 33211 11111000 011 112245688999998 888
Q ss_pred cCChh
Q 048393 279 HCGWN 283 (369)
Q Consensus 279 hgG~~ 283 (369)
|+-.+
T Consensus 262 ~lPlt 266 (386)
T PLN03139 262 NTPLT 266 (386)
T ss_pred eCCCC
Confidence 87543
No 342
>PRK04940 hypothetical protein; Provisional
Probab=22.16 E-value=2.7e+02 Score=23.35 Aligned_cols=31 Identities=16% Similarity=0.098 Sum_probs=26.1
Q ss_pred CCEEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 35 VDCIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 35 ~D~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
+.++|-..+. .||.-+|+++|+|.|.+.|+-
T Consensus 61 ~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv 92 (180)
T PRK04940 61 RPLICGVGLGGYWAERIGFLCGIRQVIFNPNL 92 (180)
T ss_pred CcEEEEeChHHHHHHHHHHHHCCCEEEECCCC
Confidence 4677777776 889999999999999987765
No 343
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=22.08 E-value=4e+02 Score=21.07 Aligned_cols=68 Identities=12% Similarity=-0.039 Sum_probs=39.1
Q ss_pred HHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHH
Q 048393 147 EWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLK 226 (369)
Q Consensus 147 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~ 226 (369)
..+...++.+++.|+-.| .+++.+-......+ +|.+|.-+ ......++.+++.++
T Consensus 25 ~~lr~~G~eVi~LG~~vp----------------------~e~i~~~a~~~~~d-~V~lS~~~--~~~~~~~~~~~~~L~ 79 (137)
T PRK02261 25 RALTEAGFEVINLGVMTS----------------------QEEFIDAAIETDAD-AILVSSLY--GHGEIDCRGLREKCI 79 (137)
T ss_pred HHHHHCCCEEEECCCCCC----------------------HHHHHHHHHHcCCC-EEEEcCcc--ccCHHHHHHHHHHHH
Confidence 446667788999997654 34444433332222 55555433 345667788888887
Q ss_pred hCCC-cEEEEEeCC
Q 048393 227 ASDK-YFLWVVRES 239 (369)
Q Consensus 227 ~~~~-~~i~~~~~~ 239 (369)
+.+. .+.|.+++.
T Consensus 80 ~~~~~~~~i~vGG~ 93 (137)
T PRK02261 80 EAGLGDILLYVGGN 93 (137)
T ss_pred hcCCCCCeEEEECC
Confidence 7633 445555543
No 344
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=21.93 E-value=2.1e+02 Score=23.79 Aligned_cols=37 Identities=24% Similarity=0.225 Sum_probs=26.8
Q ss_pred HHHHHHHhcCCCCEEEECCCcch-------HHHHHHHhCCCcEEE
Q 048393 24 TFTELVERMNDVDCIVYDSFLPW-------ALDVAKKFGLTGAAF 61 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~-------~~~~A~~lgiP~v~~ 61 (369)
.+.++|.+.++| ++|+...... ...+|+++++|++..
T Consensus 26 ~aa~lI~~AKrP-lIivG~ga~~~~ea~e~l~elaEkl~iPVvtT 69 (171)
T PRK00945 26 IAAMMIKKAKRP-LLVVGSLLLDDEELLDRAVKIAKKANIPVAAT 69 (171)
T ss_pred HHHHHHHhCCCc-EEEECcCccccchHHHHHHHHHHHHCCCEEEc
Confidence 555667666466 7887766544 567899999999974
No 345
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=21.82 E-value=2e+02 Score=22.10 Aligned_cols=36 Identities=14% Similarity=0.167 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCCEEEECCCcch---HHHHHHHhC-CCcEE
Q 048393 24 TFTELVERMNDVDCIVYDSFLPW---ALDVAKKFG-LTGAA 60 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~---~~~~A~~lg-iP~v~ 60 (369)
.+..++++. +||+|.+...... +..++...+ +|.+.
T Consensus 65 ~l~k~ik~~-~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~ 104 (139)
T PF13477_consen 65 RLRKIIKKE-KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIY 104 (139)
T ss_pred HHHHHhccC-CCCEEEEecCChHHHHHHHHHHHcCCCCEEE
Confidence 667778777 8999988876542 333556778 88775
No 346
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=21.77 E-value=1.9e+02 Score=23.32 Aligned_cols=41 Identities=10% Similarity=0.097 Sum_probs=27.7
Q ss_pred HHHHHHhcC-CCCEEEECCCc---------chHHHHHHHhCCCcEEEcccc
Q 048393 25 FTELVERMN-DVDCIVYDSFL---------PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 25 l~~ll~~~~-~~D~vI~D~~~---------~~~~~~A~~lgiP~v~~~~~~ 65 (369)
+.+.+++.. .+|+||+|... ....+++..++.|.+.+....
T Consensus 89 i~~~~~~l~~~~D~viid~~g~~~~~~~~~~~~~dl~~~~~~~vilV~~~~ 139 (166)
T TIGR00347 89 LSKHLRTLEQKYDFVLVEGAGGLCVPITEEYTTADLIKLLQLPVILVVRVK 139 (166)
T ss_pred HHHHHHHHHhcCCEEEEEcCCccccCCCCCCcHHHHHHHhCCCEEEEECCC
Confidence 344444333 89999988741 246668999999988876543
No 347
>TIGR01860 VNFD nitrogenase vanadium-iron protein, alpha chain. This model represents the alpha chain of the vanadium-containing component of the vanadium-iron nitrogenase compound I. The complex also includes a second alpha chain, two beta chains and two delta chains. Compount I interacts with compound II also known as the iron-protein which transfers electrons to compound I where the catalysis occurs.
Probab=21.75 E-value=1.1e+02 Score=29.93 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=22.8
Q ss_pred HHHHhcCCCCEEEECCCcchHHHHHHHhCCCcE
Q 048393 27 ELVERMNDVDCIVYDSFLPWALDVAKKFGLTGA 59 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v 59 (369)
+.+.+. ++|++|.... ...+|+++|||++
T Consensus 391 ~~~~~~-~pDliig~s~---~~~~A~klgiP~v 419 (461)
T TIGR01860 391 EVLDLI-KPDVIFTGPR---VGELVKKLHIPYV 419 (461)
T ss_pred HHHHhc-CCCEEEeCCc---chhhHhhcCCCEE
Confidence 445555 8999998865 5678999999987
No 348
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=21.69 E-value=2.4e+02 Score=22.34 Aligned_cols=68 Identities=12% Similarity=0.051 Sum_probs=39.0
Q ss_pred HHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHH
Q 048393 147 EWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLK 226 (369)
Q Consensus 147 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~ 226 (369)
..+.+.++.+++-|...+. .+-++.-.+..++ +|- +++........+..+.+.|+
T Consensus 23 ~~l~~~GfeVi~LG~~v~~---------------------e~~v~aa~~~~ad--iVg--lS~l~~~~~~~~~~~~~~l~ 77 (134)
T TIGR01501 23 HAFTNAGFNVVNLGVLSPQ---------------------EEFIKAAIETKAD--AIL--VSSLYGHGEIDCKGLRQKCD 77 (134)
T ss_pred HHHHHCCCEEEECCCCCCH---------------------HHHHHHHHHcCCC--EEE--EecccccCHHHHHHHHHHHH
Confidence 4566777888888875432 2222333333222 444 44554455567888888888
Q ss_pred hCCC-cEEEEEeCC
Q 048393 227 ASDK-YFLWVVRES 239 (369)
Q Consensus 227 ~~~~-~~i~~~~~~ 239 (369)
+.+. .+.|.+++.
T Consensus 78 ~~gl~~~~vivGG~ 91 (134)
T TIGR01501 78 EAGLEGILLYVGGN 91 (134)
T ss_pred HCCCCCCEEEecCC
Confidence 7664 445666653
No 349
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated
Probab=21.56 E-value=1.5e+02 Score=30.13 Aligned_cols=27 Identities=22% Similarity=0.385 Sum_probs=21.9
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|...++|||++-
T Consensus 75 ~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~i~ 107 (595)
T PRK09107 75 PGVVLVTSGPGATNAVTPLQDALMDSIPLVCIT 107 (595)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEE
Confidence 34489998877 6788899999999874
No 350
>COG3200 AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=21.31 E-value=2.3e+02 Score=26.49 Aligned_cols=52 Identities=8% Similarity=0.198 Sum_probs=35.4
Q ss_pred hhHHHHHhc---cC--CCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 048393 187 IESCMKWLN---DR--ANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESE 240 (369)
Q Consensus 187 ~~~~~~~l~---~~--~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 240 (369)
++++.+.++ .. +.+-.+++-||+.- -.+.+-.++++.+..+..|||+.....
T Consensus 296 ~d~ll~l~d~LnP~nepGRLtLi~RmG~dK--V~d~LP~li~av~~eG~~VvWs~DPMH 352 (445)
T COG3200 296 PDELLELIDRLNPHNEPGRLTLIARMGADK--VGDRLPPLVEAVEAEGHQVIWSSDPMH 352 (445)
T ss_pred HHHHHHHHHhcCCCCCCceEEeehhhcchH--HhhhhhHHHHHHHHcCCceEEecCCCC
Confidence 455555444 22 33457778788763 234567788999999999999987653
No 351
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=21.22 E-value=96 Score=28.70 Aligned_cols=37 Identities=22% Similarity=0.273 Sum_probs=30.5
Q ss_pred HhhcccCcCceeecCChhhHHHHHh---hCCceeecCCCC
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALG---LGVPMLAMPQWS 302 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~---~GvP~i~~P~~~ 302 (369)
+.|..-+++.+|.=||-+|+.-|.. +|+|+|++|-..
T Consensus 86 ~~l~~~~Id~Li~IGGdgs~~~a~~L~e~~i~vigiPkTI 125 (317)
T cd00763 86 EQLKKHGIDALVVIGGDGSYMGAMRLTEHGFPCVGLPGTI 125 (317)
T ss_pred HHHHHcCCCEEEEECCchHHHHHHHHHHcCCCEEEecccc
Confidence 4577778888999999999887754 599999999653
No 352
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=21.18 E-value=1.1e+02 Score=30.50 Aligned_cols=26 Identities=27% Similarity=0.385 Sum_probs=21.8
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.||...++|+|++-
T Consensus 65 gv~~~t~GpG~~n~~~~l~~A~~~~~Pvl~i~ 96 (548)
T PRK08978 65 GVCIATSGPGATNLITGLADALLDSVPVVAIT 96 (548)
T ss_pred EEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3389998876 6789999999999984
No 353
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=21.11 E-value=5.5e+02 Score=24.48 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=37.3
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+-.|.+|.++ +.+++.+...|.+++.. .... .. .. . ...+.+-.++++.+|+ ++.
T Consensus 116 gktvGIIG~G~IG-------~~va~~l~a~G~~V~~~-Dp~~-~~-~~-------~---~~~~~~l~ell~~aDi--V~l 173 (381)
T PRK00257 116 ERTYGVVGAGHVG-------GRLVRVLRGLGWKVLVC-DPPR-QE-AE-------G---DGDFVSLERILEECDV--ISL 173 (381)
T ss_pred cCEEEEECCCHHH-------HHHHHHHHHCCCEEEEE-CCcc-cc-cc-------c---CccccCHHHHHhhCCE--EEE
Confidence 3457788888886 45556666678887643 2110 00 00 0 1235567788898988 887
Q ss_pred cCCh
Q 048393 279 HCGW 282 (369)
Q Consensus 279 hgG~ 282 (369)
|.-.
T Consensus 174 h~Pl 177 (381)
T PRK00257 174 HTPL 177 (381)
T ss_pred eCcC
Confidence 7654
No 354
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional
Probab=21.09 E-value=7.2e+02 Score=25.24 Aligned_cols=52 Identities=12% Similarity=0.119 Sum_probs=31.2
Q ss_pred ecCChhhHHHHHhhCCc--e--eecCC-CCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHh
Q 048393 278 THCGWNSTMEALGLGVP--M--LAMPQ-WSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEIL 342 (369)
Q Consensus 278 ~hgG~~s~~eal~~GvP--~--i~~P~-~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l 342 (369)
.+||+|+........-+ + +++|. +.+.-.-....++. .++++.|.++|++++
T Consensus 524 ~~GG~gs~v~~~l~~~~~~~~~~gi~d~f~~~g~~~~l~~~~-------------Gl~~~~I~~~i~~~l 580 (581)
T PRK12315 524 LDGGFGEKIARYYGNSDMKVLNYGAKKEFNDRVPVEELYKRN-------------HLTPEQIVEDILSVL 580 (581)
T ss_pred cCCCHHHHHHHHHHcCCCeEEEecCCCCCCCCCCHHHHHHHH-------------CcCHHHHHHHHHHHh
Confidence 46899886666554333 3 45555 34433333444444 378889988887765
No 355
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=21.08 E-value=1.2e+02 Score=30.77 Aligned_cols=27 Identities=11% Similarity=0.121 Sum_probs=21.9
Q ss_pred cCceeecCChh------hHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.+++++|.|.| .+.+|...++|+|++.
T Consensus 65 ~gv~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 65 MSMVIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CEEEEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 34488998887 5679999999999985
No 356
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=20.94 E-value=2.2e+02 Score=28.52 Aligned_cols=78 Identities=17% Similarity=0.118 Sum_probs=49.2
Q ss_pred eccChH---HhhcccCcCceeecCCh---hhHHHHHhhCCceee----cCCC----------------CChhHHHHHHHh
Q 048393 260 NWCPQL---GVLAHEATGCFLTHCGW---NSTMEALGLGVPMLA----MPQW----------------SDQSTNAKYIMD 313 (369)
Q Consensus 260 ~~~p~~---~iL~~~~~~~~I~hgG~---~s~~eal~~GvP~i~----~P~~----------------~dQ~~na~~~~~ 313 (369)
+-+++. .+|.++.+ ||-=|.- =+-.||++.|.|.|- -|.. .-|.-.|+. .
T Consensus 328 G~l~~~ef~~lL~~akv--fiGlGfP~EgPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~--~ 403 (559)
T PF15024_consen 328 GILSGDEFQQLLRKAKV--FIGLGFPYEGPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEE--F 403 (559)
T ss_pred CcCCHHHHHHHHHhhhE--eeecCCCCCCCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHh--h
Confidence 445544 68889988 9977654 389999999998773 1211 123333331 1
Q ss_pred hcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 314 VGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 314 ~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
. |-=-+...+ .-+.++|++||+++|.++
T Consensus 404 i-G~PhVytVd---~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 404 I-GEPHVYTVD---INNSTEVEAAVKAILATP 431 (559)
T ss_pred C-CCCeEEEEc---CCCHHHHHHHHHHHHhcC
Confidence 2 433333332 348899999999999664
No 357
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=20.92 E-value=5.7e+02 Score=23.59 Aligned_cols=97 Identities=11% Similarity=0.078 Sum_probs=52.7
Q ss_pred cccccEEEecchHhhhHHHHHHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEE
Q 048393 127 IDKADWILCNTFYELEKEVTEWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVS 206 (369)
Q Consensus 127 ~~~~~~~li~s~~ele~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs 206 (369)
..+.|++++.+. ....+....+.+.+.|+..++-..+.... ...-.|...| -...-++|-..+.+.+.|++
T Consensus 112 ~~~vdGiIi~~~-~~~~~~~~~l~~~~~P~V~i~~~~~~~~~-~~V~~Dn~~~-------~~~a~~~L~~~G~~~i~~i~ 182 (333)
T COG1609 112 QKRVDGLILLGE-RPNDSLLELLAAAGIPVVVIDRSPPGLGV-PSVGIDNFAG-------AYLATEHLIELGHRRIAFIG 182 (333)
T ss_pred HcCCCEEEEecC-CCCHHHHHHHHhcCCCEEEEeCCCccCCC-CEEEEChHHH-------HHHHHHHHHHCCCceEEEEe
Confidence 346788888772 22233455666667887777754331000 0000111111 23334444444456688888
Q ss_pred eCccccCCHHHHHHHHHHHHhCCCcE
Q 048393 207 FGSMATLKMEQMEELAWGLKASDKYF 232 (369)
Q Consensus 207 ~Gs~~~~~~~~~~~~~~~l~~~~~~~ 232 (369)
.+..........+-+.+++++.+..+
T Consensus 183 ~~~~~~~~~~R~~Gf~~al~~~~~~~ 208 (333)
T COG1609 183 GPLDSSASRERLEGYRAALREAGLPI 208 (333)
T ss_pred CCCccccHhHHHHHHHHHHHHCCCCC
Confidence 77644444566778888888877653
No 358
>TIGR02418 acolac_catab acetolactate synthase, catabolic. Acetolactate synthase (EC 2.2.1.6) combines two molecules of pyruvate to yield 2-acetolactate with the release of CO2. This reaction may be involved in either valine biosynthesis (biosynthetic) or conversion of pyruvate to acetoin and possibly to 2,3-butanediol (catabolic). The biosynthetic type, described by TIGR00118, is also capable of forming acetohydroxybutyrate from pyruvate and 2-oxobutyrate for isoleucine biosynthesis. The family described here, part of the same larger family of thiamine pyrophosphate-dependent enzymes (pfam00205, pfam02776) is the catabolic form, generally found associated with in species with acetolactate decarboxylase and usually found in the same operon. The model may not encompass all catabolic acetolactate synthases, but rather one particular clade in the larger TPP-dependent enzyme family.
Probab=20.89 E-value=1.2e+02 Score=30.31 Aligned_cols=26 Identities=27% Similarity=0.302 Sum_probs=21.6
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.+|-..++|+|++-
T Consensus 63 gv~~~t~GpG~~n~l~gl~~A~~~~~Pvl~I~ 94 (539)
T TIGR02418 63 GVALVTSGPGCSNLVTGLATANSEGDPVVAIG 94 (539)
T ss_pred eEEEECCCCCHhHHHHHHHHHhhcCCCEEEEe
Confidence 3488998876 6788899999999985
No 359
>PRK06457 pyruvate dehydrogenase; Provisional
Probab=20.74 E-value=1.1e+02 Score=30.67 Aligned_cols=26 Identities=15% Similarity=0.181 Sum_probs=21.7
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.||...++|+|++-
T Consensus 66 gv~~~t~GPG~~N~l~~l~~A~~~~~Pvl~i~ 97 (549)
T PRK06457 66 SACMGTSGPGSIHLLNGLYDAKMDHAPVIALT 97 (549)
T ss_pred eEEEeCCCCchhhhHHHHHHHHhcCCCEEEEe
Confidence 3389998876 6789999999999884
No 360
>PRK06436 glycerate dehydrogenase; Provisional
Probab=20.73 E-value=6.3e+02 Score=23.14 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=38.7
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+-++.+|+++ +.+++.++..|.+++..-... .+.+ .. ..+.+..++++.+|+ ++.
T Consensus 122 gktvgIiG~G~IG-------~~vA~~l~afG~~V~~~~r~~----~~~~--------~~-~~~~~l~ell~~aDi--v~~ 179 (303)
T PRK06436 122 NKSLGILGYGGIG-------RRVALLAKAFGMNIYAYTRSY----VNDG--------IS-SIYMEPEDIMKKSDF--VLI 179 (303)
T ss_pred CCEEEEECcCHHH-------HHHHHHHHHCCCEEEEECCCC----cccC--------cc-cccCCHHHHHhhCCE--EEE
Confidence 3558899999987 344455555677765432211 0111 11 114466789999999 999
Q ss_pred cCChhh
Q 048393 279 HCGWNS 284 (369)
Q Consensus 279 hgG~~s 284 (369)
|.-.+.
T Consensus 180 ~lp~t~ 185 (303)
T PRK06436 180 SLPLTD 185 (303)
T ss_pred CCCCCc
Confidence 887543
No 361
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=20.71 E-value=4e+02 Score=23.95 Aligned_cols=28 Identities=21% Similarity=0.331 Sum_probs=20.6
Q ss_pred cCcCceeecCChhhHHHHHhh-----CCcee-ecCC
Q 048393 271 EATGCFLTHCGWNSTMEALGL-----GVPML-AMPQ 300 (369)
Q Consensus 271 ~~~~~~I~hgG~~s~~eal~~-----GvP~i-~~P~ 300 (369)
+++ +|.-||=||+.|++.. ..|.+ ++|.
T Consensus 58 ~d~--ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 58 VDT--VIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred CCE--EEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 455 9999999999997643 34555 5896
No 362
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=20.66 E-value=1e+02 Score=28.60 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=30.6
Q ss_pred HhhcccCcCceeecCChhhHHHHHh---hCCceeecCCCC
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALG---LGVPMLAMPQWS 302 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~---~GvP~i~~P~~~ 302 (369)
+.|..-+++.+|.=||-+|+..|.. .|+|+|++|-..
T Consensus 88 ~~l~~~~Id~LivIGGdgS~~~a~~L~~~gi~vigiPkTI 127 (324)
T TIGR02483 88 ANLKELGLDALIAIGGDGTLGIARRLADKGLPVVGVPKTI 127 (324)
T ss_pred HHHHHcCCCEEEEECCchHHHHHHHHHhcCCCEEeecccc
Confidence 5667778888999999999987754 599999999653
No 363
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name.
Probab=20.47 E-value=1.6e+02 Score=29.71 Aligned_cols=26 Identities=27% Similarity=0.318 Sum_probs=21.8
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.+|...++|+|++.
T Consensus 65 gv~~~t~GPG~~n~~~~i~~A~~~~~Pvl~I~ 96 (575)
T TIGR02720 65 GVCFGSAGPGATHLLNGLYDAKEDHVPVLALV 96 (575)
T ss_pred eEEEeCCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3489998876 6788999999999985
No 364
>PRK14478 nitrogenase molybdenum-cofactor biosynthesis protein NifE; Provisional
Probab=20.32 E-value=1.4e+02 Score=29.45 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEE
Q 048393 23 QTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAA 60 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~ 60 (369)
..+.+.++.. ++|++|.... ...+|+++|||++.
T Consensus 383 ~e~~~~i~~~-~pDliig~s~---~~~~a~k~giP~~~ 416 (475)
T PRK14478 383 RELYKMLKEA-KADIMLSGGR---SQFIALKAGMPWLD 416 (475)
T ss_pred HHHHHHHhhc-CCCEEEecCc---hhhhhhhcCCCEEE
Confidence 3445556666 8999999844 77899999999874
No 365
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=20.18 E-value=3.3e+02 Score=23.02 Aligned_cols=62 Identities=11% Similarity=0.127 Sum_probs=35.2
Q ss_pred cCCCCChhHHHHHHHhhcCceEEe----cCCC-----CCCcCHHHHH----HHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 048393 298 MPQWSDQSTNAKYIMDVGKMGLKV----PADE-----KGIVRREAIA----HCINEILEGERGKEIKQNADKWRNFAK 362 (369)
Q Consensus 298 ~P~~~dQ~~na~~~~~~~g~g~~~----~~~~-----~~~~~~~~l~----~~i~~~l~~~~~~~~~~~a~~l~~~~~ 362 (369)
.|...||...-..+-+...+|+.- .+.+ ...++.+.+. +.|.++|.|+ .+-+|-+++.+.+.
T Consensus 23 ~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~---~IIRnr~KI~Avi~ 97 (187)
T PRK10353 23 VPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDA---GIIRHRGKIQAIIG 97 (187)
T ss_pred CcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc---hhHHhHHHHHHHHH
Confidence 456788888776655544788732 2211 1256666664 6677888887 44444444433333
No 366
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=20.13 E-value=1.5e+02 Score=29.87 Aligned_cols=29 Identities=24% Similarity=0.292 Sum_probs=23.3
Q ss_pred cccCcCceeecCChh------hHHHHHhhCCceeecC
Q 048393 269 AHEATGCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
.++.+ ++.|+|-| .+.+|..-++|||++-
T Consensus 63 GkpgV--~~~tsGPGatN~~tgla~A~~d~~Pll~it 97 (550)
T COG0028 63 GKPGV--CLVTSGPGATNLLTGLADAYMDSVPLLAIT 97 (550)
T ss_pred CCCEE--EEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 45555 99999987 4678889999999875
No 367
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=20.12 E-value=2.7e+02 Score=23.47 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=25.6
Q ss_pred HHHHHHhcCCCCEEEECCCc--chHHHHHHHhCCCcEEE
Q 048393 25 FTELVERMNDVDCIVYDSFL--PWALDVAKKFGLTGAAF 61 (369)
Q Consensus 25 l~~ll~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~ 61 (369)
+.+.++.. .+|.|+.=..- +.+..+|..+|+|.+.+
T Consensus 65 la~~~~~~-~~d~I~g~~~~GiplA~~vA~~l~~p~v~v 102 (187)
T PRK13810 65 AALRIKEM-DVDTVAGVELGGVPLATAVSLETGLPLLIV 102 (187)
T ss_pred HHHHhccC-CCCEEEEEccchHHHHHHHHHHhCCCEEEE
Confidence 33444444 78988876554 66788899999998864
No 368
>PRK14477 bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN; Provisional
Probab=20.01 E-value=1.4e+02 Score=32.26 Aligned_cols=37 Identities=14% Similarity=-0.103 Sum_probs=29.0
Q ss_pred HHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEc
Q 048393 22 LQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFL 62 (369)
Q Consensus 22 ~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~ 62 (369)
...+.++|++. +||++|.... ...+|+++|||.+...
T Consensus 378 ~~el~~~i~~~-~pDLlig~~~---~~~~a~k~giP~~~~~ 414 (917)
T PRK14477 378 TAGLLRVMREK-MPDLIVAGGK---TKFLALKTRTPFLDIN 414 (917)
T ss_pred HHHHHHHHHhc-CCCEEEecCc---hhhHHHHcCCCeEEcc
Confidence 44556667776 9999999766 6778999999999654
Done!