Query 048393
Match_columns 369
No_of_seqs 167 out of 1701
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 15:45:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048393.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048393hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5E-57 1.7E-61 432.7 30.6 343 9-369 87-439 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3E-50 1E-54 391.2 36.8 345 9-369 81-454 (480)
3 2c1x_A UDP-glucose flavonoid 3 100.0 1.5E-50 5.1E-55 390.9 32.1 344 9-369 82-437 (456)
4 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.4E-50 1.2E-54 391.7 33.4 355 8-369 86-464 (482)
5 2acv_A Triterpene UDP-glucosyl 100.0 4.2E-48 1.4E-52 374.6 30.5 338 14-369 92-448 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 2.6E-33 8.9E-38 268.6 22.3 311 9-363 82-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 9.7E-32 3.3E-36 255.4 21.1 155 191-363 228-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 3.1E-29 1.1E-33 239.7 25.8 190 132-362 193-383 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 3.2E-29 1.1E-33 239.6 22.9 191 132-362 193-384 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 2.1E-28 7.3E-33 233.6 24.2 279 22-363 107-397 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 1.9E-28 6.7E-33 233.3 19.1 159 185-362 208-366 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.3E-27 4.5E-32 226.8 24.6 278 23-363 92-382 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 3.6E-28 1.2E-32 234.1 20.6 160 190-363 257-419 (441)
14 2p6p_A Glycosyl transferase; X 100.0 5.3E-28 1.8E-32 228.6 21.1 258 22-363 96-363 (384)
15 2o6l_A UDP-glucuronosyltransfe 100.0 3.8E-28 1.3E-32 203.4 17.7 164 185-363 6-170 (170)
16 2iyf_A OLED, oleandomycin glyc 100.0 3.4E-27 1.1E-31 226.4 24.6 284 21-363 92-383 (430)
17 4fzr_A SSFS6; structural genom 99.9 2.7E-26 9.4E-31 217.9 19.9 160 190-363 217-384 (398)
18 3oti_A CALG3; calicheamicin, T 99.9 5E-25 1.7E-29 209.2 17.9 154 192-363 224-381 (398)
19 3tsa_A SPNG, NDP-rhamnosyltran 99.9 2.4E-24 8.1E-29 203.9 21.5 157 192-363 210-372 (391)
20 3otg_A CALG1; calicheamicin, T 99.9 3.8E-23 1.3E-27 196.9 25.8 153 197-363 239-392 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.8 1.3E-19 4.5E-24 169.9 15.5 151 198-357 178-338 (365)
22 2jzc_A UDP-N-acetylglucosamine 99.6 4.5E-16 1.5E-20 134.1 9.8 132 197-341 25-196 (224)
23 1f0k_A MURG, UDP-N-acetylgluco 99.5 9.6E-13 3.3E-17 122.6 18.4 149 198-357 181-337 (364)
24 3hbm_A UDP-sugar hydrolase; PS 99.4 1.1E-11 3.6E-16 111.1 14.2 115 199-322 156-273 (282)
25 3dzc_A UDP-N-acetylglucosamine 98.9 3.9E-08 1.3E-12 92.7 17.4 130 199-345 229-368 (396)
26 3okp_A GDP-mannose-dependent a 98.8 9.8E-07 3.3E-11 82.3 23.6 154 189-358 187-359 (394)
27 3ot5_A UDP-N-acetylglucosamine 98.8 2.9E-07 1E-11 86.9 17.9 131 199-346 223-363 (403)
28 1v4v_A UDP-N-acetylglucosamine 98.7 1.5E-06 5E-11 80.9 21.8 130 199-346 197-336 (376)
29 2gek_A Phosphatidylinositol ma 98.7 1.6E-06 5.5E-11 81.2 20.0 142 202-357 209-363 (406)
30 4hwg_A UDP-N-acetylglucosamine 98.7 8.3E-07 2.8E-11 83.2 17.5 132 200-346 203-344 (385)
31 1vgv_A UDP-N-acetylglucosamine 98.6 2E-06 7E-11 80.1 18.8 131 199-346 204-344 (384)
32 3c48_A Predicted glycosyltrans 98.5 2E-05 6.7E-10 74.7 23.5 96 253-360 305-408 (438)
33 2f9f_A First mannosyl transfer 98.5 4.8E-07 1.7E-11 75.0 10.1 140 202-358 24-174 (177)
34 3beo_A UDP-N-acetylglucosamine 98.5 3.6E-05 1.2E-09 71.2 23.1 130 199-345 204-343 (375)
35 2jjm_A Glycosyl transferase, g 98.5 1.6E-05 5.4E-10 74.3 20.5 93 254-358 267-365 (394)
36 3fro_A GLGA glycogen synthase; 98.4 4.5E-05 1.5E-09 71.9 20.5 155 188-358 240-411 (439)
37 2iw1_A Lipopolysaccharide core 98.2 9.4E-06 3.2E-10 75.0 10.6 156 189-360 185-354 (374)
38 2bfw_A GLGA glycogen synthase; 98.1 4.8E-05 1.7E-09 63.7 13.1 91 255-358 96-196 (200)
39 3qhp_A Type 1 capsular polysac 98.1 1.2E-05 4.1E-10 65.4 8.3 142 201-360 2-157 (166)
40 3q3e_A HMW1C-like glycosyltran 97.7 0.00028 9.6E-09 69.0 12.6 145 201-354 441-599 (631)
41 2xci_A KDO-transferase, 3-deox 97.6 0.00012 4.1E-09 68.2 8.3 100 255-365 261-367 (374)
42 2vsy_A XCC0866; transferase, g 97.6 0.00039 1.4E-08 68.1 12.5 95 254-357 434-536 (568)
43 2x6q_A Trehalose-synthase TRET 97.6 0.00093 3.2E-08 62.6 14.6 92 253-358 292-394 (416)
44 3s28_A Sucrose synthase 1; gly 97.6 0.0011 3.9E-08 67.5 15.7 93 254-358 640-749 (816)
45 4gyw_A UDP-N-acetylglucosamine 97.6 0.0012 4.2E-08 66.7 15.4 146 198-354 520-679 (723)
46 2iuy_A Avigt4, glycosyltransfe 97.6 0.00017 5.9E-09 65.8 8.3 124 203-343 164-307 (342)
47 2r60_A Glycosyl transferase, g 97.5 0.00029 1E-08 67.9 9.4 94 253-358 334-439 (499)
48 2hy7_A Glucuronosyltransferase 97.5 0.011 3.6E-07 55.5 19.5 116 202-345 223-353 (406)
49 3oy2_A Glycosyltransferase B73 97.3 0.0011 3.9E-08 61.9 10.7 89 256-357 256-369 (413)
50 3rhz_A GTF3, nucleotide sugar 97.0 0.00098 3.3E-08 61.0 6.6 133 201-363 178-322 (339)
51 1rzu_A Glycogen synthase 1; gl 97.0 0.0049 1.7E-07 58.9 11.8 140 201-354 291-454 (485)
52 2qzs_A Glycogen synthase; glyc 96.8 0.0052 1.8E-07 58.8 10.2 143 200-354 291-455 (485)
53 2x0d_A WSAF; GT4 family, trans 96.1 0.0094 3.2E-07 56.0 7.1 79 254-345 295-380 (413)
54 3vue_A GBSS-I, granule-bound s 94.2 0.17 5.7E-06 49.2 9.4 136 201-343 327-476 (536)
55 2iz6_A Molybdenum cofactor car 93.7 0.98 3.3E-05 36.7 11.5 134 187-343 34-173 (176)
56 3tov_A Glycosyl transferase fa 91.5 0.36 1.2E-05 44.0 6.8 95 199-298 184-286 (349)
57 1psw_A ADP-heptose LPS heptosy 88.5 0.91 3.1E-05 40.8 7.0 96 199-298 179-286 (348)
58 2gt1_A Lipopolysaccharide hept 87.2 0.53 1.8E-05 42.2 4.5 135 199-345 177-323 (326)
59 3nb0_A Glycogen [starch] synth 86.0 0.99 3.4E-05 44.7 5.9 46 254-301 490-551 (725)
60 1uqt_A Alpha, alpha-trehalose- 77.5 8.7 0.0003 36.4 8.9 73 258-345 336-420 (482)
61 3t5t_A Putative glycosyltransf 70.3 29 0.00098 33.0 10.4 77 255-345 353-439 (496)
62 1rcu_A Conserved hypothetical 66.6 48 0.0016 27.0 9.8 97 187-300 47-150 (195)
63 3rg8_A Phosphoribosylaminoimid 65.8 43 0.0015 26.3 8.8 140 202-365 4-150 (159)
64 2a33_A Hypothetical protein; s 60.6 48 0.0016 27.5 8.8 102 187-300 34-147 (215)
65 3qjg_A Epidermin biosynthesis 59.9 25 0.00086 28.2 6.7 114 200-318 6-142 (175)
66 3ors_A N5-carboxyaminoimidazol 58.4 66 0.0023 25.3 8.7 144 201-366 4-156 (163)
67 1ydh_A AT5G11950; structural g 55.1 24 0.00081 29.4 6.0 101 187-299 30-142 (216)
68 3ahc_A Phosphoketolase, xylulo 54.8 46 0.0016 33.8 9.0 79 276-367 727-810 (845)
69 1wek_A Hypothetical protein TT 54.3 56 0.0019 27.2 8.2 100 187-299 58-169 (217)
70 2lpm_A Two-component response 53.8 9.7 0.00033 28.6 3.1 33 28-61 48-85 (123)
71 1yt5_A Inorganic polyphosphate 53.8 9.9 0.00034 32.7 3.6 54 270-345 41-97 (258)
72 1xmp_A PURE, phosphoribosylami 53.1 84 0.0029 24.9 11.4 143 200-367 11-165 (170)
73 3lqk_A Dipicolinate synthase s 52.6 94 0.0032 25.4 9.9 56 289-345 120-187 (201)
74 3to5_A CHEY homolog; alpha(5)b 51.1 25 0.00087 26.6 5.2 37 28-65 52-97 (134)
75 1g63_A Epidermin modifying enz 50.8 86 0.0029 25.1 8.6 112 201-319 4-140 (181)
76 2pju_A Propionate catabolism o 48.0 28 0.00095 29.2 5.4 28 273-301 64-91 (225)
77 2i2c_A Probable inorganic poly 48.0 14 0.00048 32.0 3.7 53 271-345 36-94 (272)
78 3pdi_B Nitrogenase MOFE cofact 47.9 20 0.00069 33.7 5.0 34 24-61 366-399 (458)
79 1eiw_A Hypothetical protein MT 47.1 32 0.0011 25.3 4.9 64 269-343 37-109 (111)
80 3gl9_A Response regulator; bet 46.9 36 0.0012 24.5 5.5 37 28-65 41-86 (122)
81 2f62_A Nucleoside 2-deoxyribos 45.5 37 0.0013 26.7 5.5 86 200-299 10-105 (161)
82 3s2u_A UDP-N-acetylglucosamine 45.2 66 0.0023 28.8 8.0 93 202-298 5-121 (365)
83 3afo_A NADH kinase POS5; alpha 44.5 20 0.00069 32.8 4.3 36 263-300 107-147 (388)
84 3bbn_B Ribosomal protein S2; s 44.4 21 0.00073 30.1 4.1 32 34-65 157-190 (231)
85 1qkk_A DCTD, C4-dicarboxylate 43.8 70 0.0024 23.9 7.0 63 291-362 74-136 (155)
86 1p3y_1 MRSD protein; flavoprot 43.2 73 0.0025 25.9 7.1 140 201-345 10-187 (194)
87 3sbx_A Putative uncharacterize 43.0 1.3E+02 0.0045 24.3 9.0 101 187-299 33-145 (189)
88 3r8n_B 30S ribosomal protein S 42.6 25 0.00084 29.4 4.2 32 34-65 149-182 (218)
89 1t35_A Hypothetical protein YV 42.6 92 0.0032 25.1 7.6 101 187-300 22-135 (191)
90 2w36_A Endonuclease V; hypoxan 42.3 36 0.0012 28.5 5.1 40 23-62 91-138 (225)
91 1weh_A Conserved hypothetical 41.3 65 0.0022 25.5 6.4 99 187-299 22-134 (171)
92 2h31_A Multifunctional protein 40.5 1E+02 0.0036 28.4 8.3 142 199-365 264-413 (425)
93 2ywx_A Phosphoribosylaminoimid 40.4 1.3E+02 0.0045 23.5 10.8 137 203-365 2-145 (157)
94 2wqk_A 5'-nucleotidase SURE; S 39.6 22 0.00075 30.4 3.5 40 24-64 76-128 (251)
95 2vqe_B 30S ribosomal protein S 39.6 24 0.00083 30.2 3.7 32 34-65 158-191 (256)
96 4grd_A N5-CAIR mutase, phospho 39.2 1.4E+02 0.0049 23.6 9.0 147 199-367 11-166 (173)
97 2q5c_A NTRC family transcripti 39.1 24 0.00082 28.8 3.6 31 271-302 50-80 (196)
98 3qua_A Putative uncharacterize 38.6 1.5E+02 0.0053 24.1 8.4 101 187-299 42-154 (199)
99 3m6m_D Sensory/regulatory prot 38.5 41 0.0014 25.0 4.7 38 27-65 52-100 (143)
100 1vi6_A 30S ribosomal protein S 38.4 30 0.001 28.6 4.0 32 34-65 115-148 (208)
101 3t6k_A Response regulator rece 37.9 57 0.0019 23.9 5.4 37 28-65 43-88 (136)
102 3trh_A Phosphoribosylaminoimid 37.9 1.5E+02 0.0051 23.5 9.9 144 201-366 7-159 (169)
103 3bch_A 40S ribosomal protein S 37.7 31 0.0011 29.4 4.0 32 34-65 151-184 (253)
104 2q5c_A NTRC family transcripti 37.2 45 0.0016 27.1 5.0 34 34-70 142-175 (196)
105 3ezx_A MMCP 1, monomethylamine 36.9 65 0.0022 26.6 6.0 68 147-238 114-184 (215)
106 4b4k_A N5-carboxyaminoimidazol 36.7 1.6E+02 0.0055 23.5 11.6 144 200-367 22-176 (181)
107 3f6p_A Transcriptional regulat 36.3 64 0.0022 22.9 5.4 38 27-65 40-83 (120)
108 1u11_A PURE (N5-carboxyaminoim 36.2 1.7E+02 0.0057 23.5 10.4 141 201-367 22-175 (182)
109 3goc_A Endonuclease V; alpha-b 35.9 60 0.002 27.4 5.4 40 22-61 94-141 (237)
110 3j20_B 30S ribosomal protein S 35.6 37 0.0013 27.9 4.1 32 34-65 111-144 (202)
111 3kuu_A Phosphoribosylaminoimid 34.6 1.7E+02 0.0059 23.2 10.4 146 201-367 13-166 (174)
112 3evt_A Phosphoglycerate dehydr 33.4 1.9E+02 0.0064 25.5 8.7 64 199-281 137-200 (324)
113 2xzm_B RPS0E; ribosome, transl 32.6 34 0.0012 29.0 3.5 32 34-65 114-147 (241)
114 3pfn_A NAD kinase; structural 32.5 20 0.00069 32.5 2.2 31 266-298 104-138 (365)
115 1u0t_A Inorganic polyphosphate 32.3 22 0.00074 31.4 2.4 32 267-300 72-107 (307)
116 2zkq_b 40S ribosomal protein S 32.2 42 0.0014 29.3 4.0 32 34-65 118-151 (295)
117 3lp6_A Phosphoribosylaminoimid 32.0 1.9E+02 0.0066 23.0 11.1 144 200-366 7-158 (174)
118 1o4v_A Phosphoribosylaminoimid 31.2 2E+02 0.007 23.0 10.2 34 201-236 14-47 (183)
119 3c3m_A Response regulator rece 30.8 85 0.0029 22.9 5.4 37 27-64 41-86 (138)
120 3u7q_A Nitrogenase molybdenum- 30.7 34 0.0012 32.4 3.6 36 22-61 406-441 (492)
121 2an1_A Putative kinase; struct 30.5 30 0.001 30.0 3.0 71 216-300 21-95 (292)
122 3pdi_A Nitrogenase MOFE cofact 30.4 33 0.0011 32.4 3.4 36 22-61 390-425 (483)
123 3u5c_A 40S ribosomal protein S 30.3 41 0.0014 28.7 3.6 32 34-65 117-150 (252)
124 3pp8_A Glyoxylate/hydroxypyruv 29.8 2.6E+02 0.0087 24.5 9.0 64 199-281 139-202 (315)
125 3sz8_A 2-dehydro-3-deoxyphosph 29.2 2.8E+02 0.0095 24.0 8.8 51 290-341 193-269 (285)
126 3s40_A Diacylglycerol kinase; 29.0 72 0.0025 27.8 5.3 81 202-301 12-98 (304)
127 3gt7_A Sensor protein; structu 29.0 83 0.0028 23.6 5.1 38 27-65 45-91 (154)
128 3l7i_A Teichoic acid biosynthe 29.0 42 0.0014 33.4 4.1 89 260-360 605-697 (729)
129 1fy2_A Aspartyl dipeptidase; s 28.9 1.6E+02 0.0053 24.4 7.1 45 187-233 21-65 (229)
130 3cg0_A Response regulator rece 28.5 92 0.0031 22.5 5.2 37 28-65 49-92 (140)
131 1o97_C Electron transferring f 28.1 83 0.0028 26.9 5.3 40 23-63 102-147 (264)
132 1zgz_A Torcad operon transcrip 27.9 98 0.0034 21.7 5.2 39 26-65 39-83 (122)
133 1tmy_A CHEY protein, TMY; chem 27.9 1.1E+02 0.0036 21.4 5.3 37 28-65 42-85 (120)
134 1mio_B Nitrogenase molybdenum 27.6 53 0.0018 30.7 4.3 35 23-61 375-409 (458)
135 3nhm_A Response regulator; pro 27.3 1.2E+02 0.0041 21.6 5.7 37 27-64 41-86 (133)
136 4e5s_A MCCFLIKE protein (BA_56 27.3 89 0.0031 27.8 5.5 72 214-300 63-136 (331)
137 1v5e_A Pyruvate oxidase; oxido 26.8 57 0.002 31.6 4.5 27 273-299 69-101 (590)
138 1efv_B Electron transfer flavo 26.7 91 0.0031 26.5 5.3 40 23-63 106-151 (255)
139 3a10_A Response regulator; pho 26.7 1.4E+02 0.0048 20.5 5.8 37 27-64 39-82 (116)
140 3u7q_B Nitrogenase molybdenum- 26.7 80 0.0027 30.1 5.4 36 22-61 427-469 (523)
141 3grc_A Sensor protein, kinase; 26.6 1.1E+02 0.0038 22.1 5.4 38 27-65 44-90 (140)
142 2jk1_A HUPR, hydrogenase trans 26.5 1.6E+02 0.0055 21.2 6.3 49 291-345 71-120 (139)
143 2xdq_B Light-independent proto 26.2 43 0.0015 31.8 3.4 35 23-61 362-396 (511)
144 3ga2_A Endonuclease V; alpha-b 26.0 82 0.0028 26.7 4.7 39 23-61 97-143 (246)
145 3hv2_A Response regulator/HD d 26.0 1E+02 0.0035 22.9 5.1 38 27-65 52-96 (153)
146 3irs_A Uncharacterized protein 25.5 60 0.0021 28.0 4.1 129 214-358 136-278 (291)
147 3kb6_A D-lactate dehydrogenase 25.3 71 0.0024 28.4 4.5 101 200-339 142-245 (334)
148 1efp_B ETF, protein (electron 25.3 90 0.0031 26.5 5.0 39 24-63 104-148 (252)
149 2iht_A Carboxyethylarginine sy 25.0 1.3E+02 0.0044 28.9 6.7 76 217-299 14-106 (573)
150 2etv_A Iron(III) ABC transport 25.0 68 0.0023 28.5 4.4 38 23-62 87-125 (346)
151 2q37_A OHCU decarboxylase; 2-O 25.0 2E+02 0.0068 23.0 6.6 55 304-362 117-171 (181)
152 3lyh_A Cobalamin (vitamin B12) 24.8 1.2E+02 0.0041 22.2 5.1 30 199-228 5-34 (126)
153 3aek_B Light-independent proto 24.7 53 0.0018 31.4 3.8 35 23-61 339-373 (525)
154 2pju_A Propionate catabolism o 24.5 44 0.0015 28.0 2.8 27 34-63 154-180 (225)
155 4hn9_A Iron complex transport 24.5 65 0.0022 28.4 4.2 39 24-64 108-146 (335)
156 3i42_A Response regulator rece 23.2 90 0.0031 22.1 4.2 36 27-63 41-85 (127)
157 1ybh_A Acetolactate synthase, 23.1 71 0.0024 30.9 4.4 26 274-299 77-108 (590)
158 1ozh_A ALS, acetolactate synth 22.8 73 0.0025 30.6 4.4 28 270-299 73-106 (566)
159 2gkg_A Response regulator homo 22.8 1.3E+02 0.0043 21.1 4.9 47 291-344 79-125 (127)
160 2o8i_A AGR_C_4230P, hypothetic 22.8 2.4E+02 0.0083 22.1 6.7 55 304-362 101-155 (165)
161 4h1h_A LMO1638 protein; MCCF-l 22.4 1.3E+02 0.0044 26.6 5.6 62 214-290 63-124 (327)
162 3p9x_A Phosphoribosylglycinami 22.0 55 0.0019 27.0 2.9 30 34-63 31-60 (211)
163 3sr3_A Microcin immunity prote 21.8 1.3E+02 0.0043 26.8 5.5 72 214-300 64-137 (336)
164 3cu5_A Two component transcrip 21.6 1.3E+02 0.0046 21.9 4.9 30 34-63 49-85 (141)
165 2q8p_A Iron-regulated surface 21.2 81 0.0028 26.4 3.9 39 23-63 51-90 (260)
166 3cfy_A Putative LUXO repressor 21.1 1.4E+02 0.0049 21.5 5.0 38 27-65 42-86 (137)
167 3o7i_A OHCU decarboxylase; lya 21.0 2.7E+02 0.0091 22.4 6.7 55 304-362 126-180 (189)
168 2j48_A Two-component sensor ki 20.9 1.8E+02 0.006 19.8 5.3 38 27-65 39-85 (119)
169 1t9b_A Acetolactate synthase, 20.7 81 0.0028 31.2 4.2 26 274-299 147-178 (677)
170 2yq5_A D-isomer specific 2-hyd 20.2 2.5E+02 0.0084 25.0 7.0 62 200-282 149-210 (343)
171 2bon_A Lipid kinase; DAG kinas 20.1 1.4E+02 0.0049 26.2 5.5 79 202-301 33-119 (332)
172 3lq1_A 2-succinyl-5-enolpyruvy 20.0 85 0.0029 30.2 4.2 26 274-299 76-107 (578)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5e-57 Score=432.70 Aligned_cols=343 Identities=26% Similarity=0.447 Sum_probs=281.4
Q ss_pred CHHHHHHHHHHHcHHHHHHHHH----hcC-CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhc--cCcC
Q 048393 9 SNQAYVDRFWKIGLQTFTELVE----RMN-DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNK--GLIK 81 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~----~~~-~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~--~~~~ 81 (369)
+..+++..+.+...+.++++++ +.. ++||||+|.++.|+.++|+++|||++.|++++++.+..+.+... ....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 87 NPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 3444455444544545555444 322 89999999999999999999999999999999998887776542 1111
Q ss_pred --CCCCCCcc-cCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcCCCceee
Q 048393 82 --LPLTGDEV-LLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQHWLLRT 158 (369)
Q Consensus 82 --~~~~~~~~-~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~~~~~~~ 158 (369)
....+.++ .+||+|.+..++++.++.. .....+.+.+ .+..+...+++++++||+++||+++.+.+.+.-.++++
T Consensus 167 ~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~-~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~ 244 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATML-HKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLN 244 (454)
T ss_dssp HHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHH-HHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEE
T ss_pred CCccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHH-HHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEE
Confidence 00112334 4899998889999988764 3334456666 77777788899999999999999888888765346999
Q ss_pred eCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 048393 159 IGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRE 238 (369)
Q Consensus 159 vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 238 (369)
|||+.+... . ...+.+.++.+|++.++++++|||+|||+...+.+++.+++.+|+..+++|||+++.
T Consensus 245 vGPl~~~~~-------~------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~ 311 (454)
T 3hbf_A 245 VGPFNLTTP-------Q------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRG 311 (454)
T ss_dssp CCCHHHHSC-------C------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCS
T ss_pred ECCcccccc-------c------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 999865310 0 001125679999999888999999999999988999999999999999999999987
Q ss_pred CccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCce
Q 048393 239 SEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMG 318 (369)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g 318 (369)
.....+++++.++.++|+++++|+||.++|+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|
T Consensus 312 ~~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~G 391 (454)
T 3hbf_A 312 DPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIG 391 (454)
T ss_dssp CHHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSE
T ss_pred cchhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCee
Confidence 65556788888888899999999999999999998889999999999999999999999999999999999999955999
Q ss_pred EEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 319 LKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
+.++.. .+++++|.++|+++|++++|++||+||+++++++++++.+||
T Consensus 392 v~l~~~---~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gG 439 (454)
T 3hbf_A 392 VGVDNG---VLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNG 439 (454)
T ss_dssp EECGGG---SCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred EEecCC---CCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCC
Confidence 999866 789999999999999987778999999999999999999998
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3e-50 Score=391.19 Aligned_cols=345 Identities=32% Similarity=0.554 Sum_probs=265.3
Q ss_pred CHHHHHHHHHHHcHHHHHHHHHhc---CCC-CEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhc----cCc
Q 048393 9 SNQAYVDRFWKIGLQTFTELVERM---NDV-DCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNK----GLI 80 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~~~---~~~-D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~----~~~ 80 (369)
+....+........+.+++++++. .++ ||||+|.++.|+..+|+++|||++.+++++++....+.+... ...
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 344444445567778899999774 278 999999999999999999999999999999877666554331 111
Q ss_pred CCCCCCCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC---CCcee
Q 048393 81 KLPLTGDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ---HWLLR 157 (369)
Q Consensus 81 ~~~~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~---~~~~~ 157 (369)
+......+..+|+++.+...+++..+.. .. ......+ .+......+.+++++||++++|+++...+.+. ..+++
T Consensus 161 ~~~~~~~~~~~Pg~~p~~~~~l~~~~~~-~~-~~~~~~~-~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~ 237 (480)
T 2vch_A 161 EFRELTEPLMLPGCVPVAGKDFLDPAQD-RK-DDAYKWL-LHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 237 (480)
T ss_dssp CGGGCSSCBCCTTCCCBCGGGSCGGGSC-TT-SHHHHHH-HHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEE
T ss_pred cccccCCcccCCCCCCCChHHCchhhhc-CC-chHHHHH-HHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEE
Confidence 1111122345678776666666655432 11 1233444 44555566788999999999999888887652 13699
Q ss_pred eeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 048393 158 TIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVR 237 (369)
Q Consensus 158 ~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 237 (369)
+|||+..... .+ .. .+.+.++.+|++.++++++|||||||+...+.+++.+++++|+.++++|||+++
T Consensus 238 ~vGpl~~~~~------~~-----~~-~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~ 305 (480)
T 2vch_A 238 PVGPLVNIGK------QE-----AK-QTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIR 305 (480)
T ss_dssp ECCCCCCCSC------SC-----C------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEeccccccc------cc-----cC-ccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 9999875310 00 00 123678999999987889999999999988889999999999999999999998
Q ss_pred CCcc----------------CCCCcchhcccCCCcEEEe-ccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCC
Q 048393 238 ESEQ----------------SKLPENFSDETSQKGLVVN-WCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQ 300 (369)
Q Consensus 238 ~~~~----------------~~~~~~~~~~~~~~~~~~~-~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~ 300 (369)
.... ..+|+++.++..++.+++. |+||.+||+|+++++||||||+||++||+++|||||++|+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 306 SPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp CCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred CccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccc
Confidence 6421 2467777666666667775 9999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHH-HhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 301 WSDQSTNAKYI-MDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 301 ~~dQ~~na~~~-~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
+.||+.||+++ ++. |+|+.+...+.+.+++++|.++|+++|.++++.+||+||+++++++++++.+||
T Consensus 386 ~~DQ~~na~~l~~~~-G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gG 454 (480)
T 2vch_A 386 YAEQKMNAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDG 454 (480)
T ss_dssp STTHHHHHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred cccchHHHHHHHHHh-CeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999997 577 999999754223689999999999999866566999999999999999999987
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.5e-50 Score=390.87 Aligned_cols=344 Identities=30% Similarity=0.498 Sum_probs=264.5
Q ss_pred CHHHHHHHHHHHcHHHHHHHHH----hc-CCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhh-----cc
Q 048393 9 SNQAYVDRFWKIGLQTFTELVE----RM-NDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVN-----KG 78 (369)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~ll~----~~-~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~-----~~ 78 (369)
+...++..+...+.+.++++++ +. .++||||+|.++.|+..+|+++|||++.+++++++....+.+.. .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
T 2c1x_A 82 RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIG 161 (456)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHC
T ss_pred ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccC
Confidence 3445555555555555555554 22 28999999999999999999999999999999877665443221 01
Q ss_pred CcCC-C-CCCCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcCCCce
Q 048393 79 LIKL-P-LTGDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQHWLL 156 (369)
Q Consensus 79 ~~~~-~-~~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~~~~~ 156 (369)
..+. . .......+||++.+..++++.++........+...+ .+..+...+++++++||++++|+++.+.+++...++
T Consensus 162 ~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~ 240 (456)
T 2c1x_A 162 VSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRML-HRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTY 240 (456)
T ss_dssp SSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHH-HHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCE
T ss_pred CcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHH-HHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCE
Confidence 1110 1 111122468887666666665443211122334444 444455667889999999999998776666542359
Q ss_pred eeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEE
Q 048393 157 RTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVV 236 (369)
Q Consensus 157 ~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~ 236 (369)
++|||+..... .. . .+.+.++.+|++..+++++|||+|||....+.+++.+++.+|+..+++|+|++
T Consensus 241 ~~vGpl~~~~~-------~~-----~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~ 307 (456)
T 2c1x_A 241 LNIGPFNLITP-------PP-----V-VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSL 307 (456)
T ss_dssp EECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred EEecCcccCcc-------cc-----c-ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 99999864300 00 0 01134688999988788999999999998888889999999999999999999
Q ss_pred eCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcC
Q 048393 237 RESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGK 316 (369)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g 316 (369)
+......+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||
T Consensus 308 ~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g 387 (456)
T 2c1x_A 308 RDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLE 387 (456)
T ss_dssp CGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSC
T ss_pred CCcchhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhC
Confidence 87654557777776677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 317 MGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 317 ~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
+|+.++.. .+++++|.++|+++|+|+++++|++||+++++.+++++.+||
T Consensus 388 ~g~~l~~~---~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gG 437 (456)
T 2c1x_A 388 IGVRIEGG---VFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKG 437 (456)
T ss_dssp CEEECGGG---SCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred eEEEecCC---CcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCC
Confidence 99999865 789999999999999987778899999999999999999988
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.4e-50 Score=391.69 Aligned_cols=355 Identities=32% Similarity=0.602 Sum_probs=270.1
Q ss_pred CCHHHHHHHHHHHcHHHHHHHHHhc------CCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhh----c
Q 048393 8 ESNQAYVDRFWKIGLQTFTELVERM------NDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVN----K 77 (369)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~ll~~~------~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~----~ 77 (369)
.++..+++.+...+.+.++++++.. .++||||+|.++.|+..+|+++|||++.+++++++....+.+.. .
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 3555667766678888999999853 28999999999999999999999999999999977665543322 2
Q ss_pred cCcCCCCC--------CCcc-cCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHH
Q 048393 78 GLIKLPLT--------GDEV-LLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEW 148 (369)
Q Consensus 78 ~~~~~~~~--------~~~~-~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~ 148 (369)
+..|.... .... .+|+++.+...+++.++........+.+.+ ....+...+++++++||+++||+++.+.
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFF-IEVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHH-HHHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHH-HHHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 33332211 0111 356666555556666654322223344444 5555666788999999999999987777
Q ss_pred HhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhC
Q 048393 149 LGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKAS 228 (369)
Q Consensus 149 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~ 228 (369)
+++.-.++++|||+............+...+...+. .+.++.+|++.++++++|||+|||+...+.+++.+++.+|++.
T Consensus 245 ~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 323 (482)
T 2pq6_A 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWK-EDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANC 323 (482)
T ss_dssp HHTTCTTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHhCCcEEEEcCCcccccccccccccccccccccc-cchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 766434699999986420000000000000011111 1456899999887889999999999988888899999999999
Q ss_pred CCcEEEEEeCCc----cCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCCh
Q 048393 229 DKYFLWVVRESE----QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQ 304 (369)
Q Consensus 229 ~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ 304 (369)
+++|+|+++... ...+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||
T Consensus 324 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ 403 (482)
T 2pq6_A 324 KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQ 403 (482)
T ss_dssp TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred CCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccch
Confidence 999999998642 1126777766778899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHH-hhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 305 STNAKYIM-DVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 305 ~~na~~~~-~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
+.||++++ +. |+|+.+. . .+++++|.++|+++|.|+++++|++||+++++.+++|+.+||
T Consensus 404 ~~na~~~~~~~-G~g~~l~-~---~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gG 464 (482)
T 2pq6_A 404 PTDCRFICNEW-EIGMEID-T---NVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGG 464 (482)
T ss_dssp HHHHHHHHHTS-CCEEECC-S---SCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHHh-CEEEEEC-C---CCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999997 56 9999997 4 689999999999999988677899999999999999999988
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.2e-48 Score=374.64 Aligned_cols=338 Identities=26% Similarity=0.465 Sum_probs=261.3
Q ss_pred HHHHHHHcHHHHHHHHHhc--CCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCc--CCCCCCC--
Q 048393 14 VDRFWKIGLQTFTELVERM--NDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLI--KLPLTGD-- 87 (369)
Q Consensus 14 ~~~~~~~~~~~l~~ll~~~--~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-- 87 (369)
+........+.+++++++. .++||||+|.++.|+..+|+++|||++.+++++++....+.+...... ++.....
T Consensus 92 ~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (463)
T 2acv_A 92 ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDH 171 (463)
T ss_dssp HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCCSSGGG
T ss_pred HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCCCCccccC
Confidence 3334467788999999872 289999999999999999999999999999999887766655442111 1111122
Q ss_pred -cccCCCC-CCCCCCCCCCccCCCCCchhHHHHHHHHHhhccccccEEEecchHhhhHHHHHHHhcC---CCceeeeCcc
Q 048393 88 -EVLLPGL-PPLDPQDTPSFINDPASYPAFFDMIVTRQFYNIDKADWILCNTFYELEKEVTEWLGKQ---HWLLRTIGPT 162 (369)
Q Consensus 88 -~~~~pg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~ele~~~~~~~~~~---~~~~~~vGp~ 162 (369)
+..+||+ +.+..++++.++... ......+ .+......+++++++||++++|++...++.+. ..++++|||+
T Consensus 172 ~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~-~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl 247 (463)
T 2acv_A 172 QLLNIPGISNQVPSNVLPDACFNK---DGGYIAY-YKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPL 247 (463)
T ss_dssp CEECCTTCSSCEEGGGSCHHHHCT---TTHHHHH-HHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCC
T ss_pred ceeECCCCCCCCChHHCchhhcCC---chHHHHH-HHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCC
Confidence 4456887 555555555433211 1233444 44555567788999999999999888887763 2469999998
Q ss_pred CCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccc-cCCHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 048393 163 LPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMA-TLKMEQMEELAWGLKASDKYFLWVVRESEQ 241 (369)
Q Consensus 163 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 241 (369)
.+.... .+ . +. .+ +.+.++.+|++.++++++|||+|||+. ..+.+++.+++.+|+..+++|||+++.. .
T Consensus 248 ~~~~~~-----~~-~-~~-~~-~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-~ 317 (463)
T 2acv_A 248 LDLKGQ-----PN-P-KL-DQ-AQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE-K 317 (463)
T ss_dssp CCSSCC-----CB-T-TB-CH-HHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC-G
T ss_pred cccccc-----cc-c-cc-cc-ccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC-c
Confidence 754100 00 0 00 00 125789999999888899999999999 7888889999999999999999999863 1
Q ss_pred CCCCcchhccc--CCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHH-HhhcCce
Q 048393 242 SKLPENFSDET--SQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYI-MDVGKMG 318 (369)
Q Consensus 242 ~~~~~~~~~~~--~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~-~~~~g~g 318 (369)
..+++++.++. ++++++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++ ++. |+|
T Consensus 318 ~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~-g~g 396 (463)
T 2acv_A 318 KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEW-GVG 396 (463)
T ss_dssp GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTS-CCE
T ss_pred ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHc-CeE
Confidence 23666666555 67899999999999999999999999999999999999999999999999999999995 777 999
Q ss_pred EEe-cCCCCC--CcCHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHhcCC
Q 048393 319 LKV-PADEKG--IVRREAIAHCINEILE-GERGKEIKQNADKWRNFAKEAVAKGG 369 (369)
Q Consensus 319 ~~~-~~~~~~--~~~~~~l~~~i~~~l~-~~~~~~~~~~a~~l~~~~~~~~~~~g 369 (369)
+.+ ...+.+ .+++++|.++|+++|+ ++ +||+||+++++.+++++.+||
T Consensus 397 ~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~~gG 448 (463)
T 2acv_A 397 LGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVVDGG 448 (463)
T ss_dssp EESCSSCCTTCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTSTTS
T ss_pred EEEecccCCCCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhcCC
Confidence 999 321122 4899999999999996 45 899999999999999999988
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.6e-33 Score=268.61 Aligned_cols=311 Identities=20% Similarity=0.234 Sum_probs=204.9
Q ss_pred CHHHHHHHHHH---HcHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCC
Q 048393 9 SNQAYVDRFWK---IGLQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLT 85 (369)
Q Consensus 9 ~~~~~~~~~~~---~~~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (369)
+...++..+.+ ...+.+.+++++. +||+||+|.++.|+..+|+++|||++.+++.++..............+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (424)
T 2iya_A 82 DQESAMGLFLDEAVRVLPQLEDAYADD-RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADR 160 (424)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTTS-CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccccc
Confidence 33444443333 3344555666555 8999999998889999999999999999877632111100000000000000
Q ss_pred CCcccCCCCCCCCCCCCCCccCCCCCchhHHHHHHHHHhhc----------cccccEEEecchHhhhHHHHHHHhcCCCc
Q 048393 86 GDEVLLPGLPPLDPQDTPSFINDPASYPAFFDMIVTRQFYN----------IDKADWILCNTFYELEKEVTEWLGKQHWL 155 (369)
Q Consensus 86 ~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~li~s~~ele~~~~~~~~~~~~~ 155 (369)
......| ....+...+.........+...+ .+.... ....+.++++++++++++. .....+
T Consensus 161 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~~~~~~ 231 (424)
T 2iya_A 161 GEEAAAP----AGTGDAEEGAEAEDGLVRFFTRL-SAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG----DTVGDN 231 (424)
T ss_dssp -----------------------HHHHHHHHHHH-HHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----GGCCTT
T ss_pred ccccccc----cccccchhhhccchhHHHHHHHH-HHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----cCCCCC
Confidence 0000000 00000001100000000111111 111111 1146778999999988632 122234
Q ss_pred eeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEE
Q 048393 156 LRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWV 235 (369)
Q Consensus 156 ~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~ 235 (369)
++++||+++. .....+|++..+++++|||++||......+.+.+++++++..+.+++|.
T Consensus 232 ~~~vGp~~~~---------------------~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~ 290 (424)
T 2iya_A 232 YTFVGPTYGD---------------------RSHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLS 290 (424)
T ss_dssp EEECCCCCCC---------------------CGGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEE
T ss_pred EEEeCCCCCC---------------------cccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 8999997542 0112246655556789999999998666778889999998888999999
Q ss_pred EeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhc
Q 048393 236 VRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVG 315 (369)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~ 315 (369)
++..... +.+ ...++|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|...||+.||+++++.
T Consensus 291 ~g~~~~~---~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~- 363 (424)
T 2iya_A 291 VGRFVDP---ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL- 363 (424)
T ss_dssp CCTTSCG---GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-
T ss_pred ECCcCCh---HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC-
Confidence 8764211 111 123568899999999999999998 999999999999999999999999999999999999998
Q ss_pred CceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 048393 316 KMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAKE 363 (369)
Q Consensus 316 g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 363 (369)
|+|+.+..+ .++.++|.++|+++++|+ +++++++++++.+++
T Consensus 364 g~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 364 GLGRHIPRD---QVTAEKLREAVLAVASDP---GVAERLAAVRQEIRE 405 (424)
T ss_dssp TSEEECCGG---GCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred CCEEEcCcC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 999999866 689999999999999998 899999998888764
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=9.7e-32 Score=255.36 Aligned_cols=155 Identities=23% Similarity=0.340 Sum_probs=128.9
Q ss_pred HHHhccCCCCceEEEEeCccccCCH--HHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhh
Q 048393 191 MKWLNDRANGSVVYVSFGSMATLKM--EQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVL 268 (369)
Q Consensus 191 ~~~l~~~~~~~~i~vs~Gs~~~~~~--~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL 268 (369)
.+|++..+++++|||++||+...+. ..+.++++++.+.+..++|..+....... ...++|+++.+|+||.++|
T Consensus 228 ~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~-----~~~~~~v~~~~~~p~~~lL 302 (400)
T 4amg_A 228 PDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLALL-----GELPANVRVVEWIPLGALL 302 (400)
T ss_dssp CTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCCC-----CCCCTTEEEECCCCHHHHH
T ss_pred cccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccccc-----ccCCCCEEEEeecCHHHHh
Confidence 3577777888999999999875433 46788999999999999999876533221 1245788999999999999
Q ss_pred cccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHH
Q 048393 269 AHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGK 348 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~ 348 (369)
+|+++ ||||||+||++||+++|||+|++|++.||+.||+++++. |+|+.++.. +++++ +|+++|+|+
T Consensus 303 ~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~-G~g~~l~~~---~~~~~----al~~lL~d~--- 369 (400)
T 4amg_A 303 ETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL-GIGFDAEAG---SLGAE----QCRRLLDDA--- 369 (400)
T ss_dssp TTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH-TSEEECCTT---TCSHH----HHHHHHHCH---
T ss_pred hhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC-CCEEEcCCC---CchHH----HHHHHHcCH---
Confidence 99998 999999999999999999999999999999999999999 999999866 56655 567888999
Q ss_pred HHHHHHHHHHHHHHH
Q 048393 349 EIKQNADKWRNFAKE 363 (369)
Q Consensus 349 ~~~~~a~~l~~~~~~ 363 (369)
+||++|+++++++++
T Consensus 370 ~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 370 GLREAALRVRQEMSE 384 (400)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999999875
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.97 E-value=3.1e-29 Score=239.65 Aligned_cols=190 Identities=14% Similarity=0.136 Sum_probs=150.9
Q ss_pred EEEecchHhhhH-HHHHHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCcc
Q 048393 132 WILCNTFYELEK-EVTEWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSM 210 (369)
Q Consensus 132 ~~li~s~~ele~-~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~ 210 (369)
.+++++++++++ +. .. .+++++||+.... . .+.+.++.+|++.. +++|||++||.
T Consensus 193 ~~l~~~~~~l~~~~~-----~~-~~~~~vG~~~~~~---------------~-~~~~~~~~~~l~~~--~~~v~v~~Gs~ 248 (415)
T 1iir_A 193 HPWVAADPVLAPLQP-----TD-LDAVQTGAWILPD---------------E-RPLSPELAAFLDAG--PPPVYLGFGSL 248 (415)
T ss_dssp SCEECSCTTTSCCCC-----CS-SCCEECCCCCCCC---------------C-CCCCHHHHHHHHTS--SCCEEEECC--
T ss_pred CEEEeeChhhcCCCc-----cc-CCeEeeCCCccCc---------------c-cCCCHHHHHHHhhC--CCeEEEeCCCC
Confidence 467888877764 11 11 1478899876430 0 12367889999754 46999999999
Q ss_pred ccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHh
Q 048393 211 ATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALG 290 (369)
Q Consensus 211 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~ 290 (369)
. ...+.++.++++++..+.+++|+++..... . ...++|+.+.+|+||.++|+++++ ||||||+||++||++
T Consensus 249 ~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~ 319 (415)
T 1iir_A 249 G-APADAVRVAIDAIRAHGRRVILSRGWADLV-L-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAAR 319 (415)
T ss_dssp --CCHHHHHHHHHHHHHTTCCEEECTTCTTCC-C-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHH
T ss_pred C-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc-c-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHH
Confidence 7 566778889999999999999998764321 1 123457889999999999988888 999999999999999
Q ss_pred hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 048393 291 LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAK 362 (369)
Q Consensus 291 ~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 362 (369)
+|||+|++|...||..||+++++. |+|+.++.. .++.++|.++|+++ +|+ +++++++++++.++
T Consensus 320 ~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~---~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 320 AGAPQILLPQMADQPYYAGRVAEL-GVGVAHDGP---IPTFDSLSAALATA-LTP---ETHARATAVAGTIR 383 (415)
T ss_dssp HTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSS---SCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSC
T ss_pred cCCCEEECCCCCccHHHHHHHHHC-CCcccCCcC---CCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHh
Confidence 999999999999999999999999 999999866 68999999999999 888 89999988877653
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.97 E-value=3.2e-29 Score=239.60 Aligned_cols=191 Identities=15% Similarity=0.096 Sum_probs=154.2
Q ss_pred EEEecchHhhhHHHHHHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhccCCCCceEEEEeCccc
Q 048393 132 WILCNTFYELEKEVTEWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMA 211 (369)
Q Consensus 132 ~~li~s~~ele~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~ 211 (369)
.++++++++++++. .. .+++++||+..+. . .+.+.++.+|++.. +++|||++||..
T Consensus 193 ~~l~~~~~~l~~~~-----~~-~~~~~vG~~~~~~---------------~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~ 248 (416)
T 1rrv_A 193 RPLLAADPVLAPLQ-----PD-VDAVQTGAWLLSD---------------E-RPLPPELEAFLAAG--SPPVHIGFGSSS 248 (416)
T ss_dssp SCEECSCTTTSCCC-----SS-CCCEECCCCCCCC---------------C-CCCCHHHHHHHHSS--SCCEEECCTTCC
T ss_pred CeEEccCccccCCC-----CC-CCeeeECCCccCc---------------c-CCCCHHHHHHHhcC--CCeEEEecCCCC
Confidence 57888888887521 11 2478899876530 0 12367889999764 469999999986
Q ss_pred c-CCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHh
Q 048393 212 T-LKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALG 290 (369)
Q Consensus 212 ~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~ 290 (369)
. ...+.++.++++++..+.+++|+++..... . ...++|+.+.+|+||.++|+++++ ||||||+||++||++
T Consensus 249 ~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~ 320 (416)
T 1rrv_A 249 GRGIADAAKVAVEAIRAQGRRVILSRGWTELV-L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATR 320 (416)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC-C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHCCCeEEEEeCCcccc-c-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHH
Confidence 4 334568889999999999999998765321 1 123567899999999999988888 999999999999999
Q ss_pred hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 048393 291 LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAK 362 (369)
Q Consensus 291 ~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 362 (369)
+|||+|++|...||..||+++++. |+|+.+... .++.++|.++|+++ .|+ +++++++++++.++
T Consensus 321 ~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~---~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 321 AGVPQLVIPRNTDQPYFAGRVAAL-GIGVAHDGP---TPTFESLSAALTTV-LAP---ETRARAEAVAGMVL 384 (416)
T ss_dssp HTCCEEECCCSBTHHHHHHHHHHH-TSEEECSSS---CCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCC
T ss_pred cCCCEEEccCCCCcHHHHHHHHHC-CCccCCCCC---CCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHh
Confidence 999999999999999999999999 999999865 68999999999999 888 89999988766543
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.96 E-value=2.1e-28 Score=233.60 Aligned_cols=279 Identities=14% Similarity=0.194 Sum_probs=191.6
Q ss_pred HHHHHHHHHhcCCCCEEEEC-CCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCCCCcccCCCCCCCCCC
Q 048393 22 LQTFTELVERMNDVDCIVYD-SFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLTGDEVLLPGLPPLDPQ 100 (369)
Q Consensus 22 ~~~l~~ll~~~~~~D~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~ 100 (369)
...+.+++++. +||+||+| ....++..+|+.+|||++.+.+...... ... . .+-..+.. . .
T Consensus 107 ~~~l~~~l~~~-~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~---------~~~--~--~~~~~~~~---~-~ 168 (415)
T 3rsc_A 107 LRATAEALDGD-VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE---------HYS--F--SQDMVTLA---G-T 168 (415)
T ss_dssp HHHHHHHHSSS-CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS---------SCC--H--HHHHHHHH---T-C
T ss_pred HHHHHHHHhcc-CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC---------ccc--c--cccccccc---c-c
Confidence 34555666666 89999999 7888899999999999998764431100 000 0 00000000 0 0
Q ss_pred CCCCccCCCCCchhHHHHHHHHHhhcc----------cc-ccEEEecchHhhhHHHHHHHhcCCCceeeeCccCCCcccc
Q 048393 101 DTPSFINDPASYPAFFDMIVTRQFYNI----------DK-ADWILCNTFYELEKEVTEWLGKQHWLLRTIGPTLPSIYLD 169 (369)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~li~s~~ele~~~~~~~~~~~~~~~~vGp~~~~~~~~ 169 (369)
..+. ....+...+ .+..... .. .+..++.+.++++.. .. ....++.++||..+.
T Consensus 169 ~~p~------~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~---~~~~~~~~vGp~~~~---- 233 (415)
T 3rsc_A 169 IDPL------DLPVFRDTL-RDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-GD---TFDDRFVFVGPCFDD---- 233 (415)
T ss_dssp CCGG------GCHHHHHHH-HHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-GG---GCCTTEEECCCCCCC----
T ss_pred CChh------hHHHHHHHH-HHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-cc---cCCCceEEeCCCCCC----
Confidence 0000 001111111 1111111 11 255666665555531 11 112348899987643
Q ss_pred ccccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchh
Q 048393 170 KQIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFS 249 (369)
Q Consensus 170 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 249 (369)
..+..+|....+++++|||++||......+.+..+++++...+.+++|.++..... +. .
T Consensus 234 -----------------~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~---~~-l 292 (415)
T 3rsc_A 234 -----------------RRFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDP---AA-L 292 (415)
T ss_dssp -----------------CGGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCG---GG-G
T ss_pred -----------------cccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCCh---HH-h
Confidence 11112344334567899999999987677778999999998889999988754111 11 1
Q ss_pred cccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCc
Q 048393 250 DETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIV 329 (369)
Q Consensus 250 ~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~ 329 (369)
...++|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||..||+++++. |+|+.+... ++
T Consensus 293 ~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~~~~~---~~ 366 (415)
T 3rsc_A 293 GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVLPGE---KA 366 (415)
T ss_dssp CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEECCGG---GC
T ss_pred cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEEcccC---CC
Confidence 224568899999999999999999 999999999999999999999999999999999999999 999999876 78
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 048393 330 RREAIAHCINEILEGERGKEIKQNADKWRNFAKE 363 (369)
Q Consensus 330 ~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 363 (369)
+.+.|.++|.++++|+ +++++++++++.+++
T Consensus 367 ~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 397 (415)
T 3rsc_A 367 DGDTLLAAVGAVAADP---ALLARVEAMRGHVRR 397 (415)
T ss_dssp CHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 9999999999999998 899999888887764
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.96 E-value=1.9e-28 Score=233.31 Aligned_cols=159 Identities=18% Similarity=0.218 Sum_probs=138.3
Q ss_pred cChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccCh
Q 048393 185 TNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQ 264 (369)
Q Consensus 185 ~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 264 (369)
++++++.+|++. .+++|||++||+.. ..+.+..+++++...+++++|+.+....... ..++|+++.+|+||
T Consensus 208 ~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~------~~~~~v~~~~~~~~ 278 (404)
T 3h4t_A 208 PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGRI------DEGDDCLVVGEVNH 278 (404)
T ss_dssp CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCCS------SCCTTEEEESSCCH
T ss_pred CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccccc------cCCCCEEEecCCCH
Confidence 347889999974 45799999999986 5667888999999999999999876532211 12468899999999
Q ss_pred HHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 265 LGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 265 ~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
.++|.++++ ||||||+||++||+++|||+|++|+..||+.||+++++. |+|+.+... .++.+.|.++|+++++
T Consensus 279 ~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~~---~~~~~~l~~ai~~ll~- 351 (404)
T 3h4t_A 279 QVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDGP---TPTVESLSAALATALT- 351 (404)
T ss_dssp HHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSS---SCCHHHHHHHHHHHTS-
T ss_pred HHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccCcC---CCCHHHHHHHHHHHhC-
Confidence 999999988 999999999999999999999999999999999999999 999999876 7899999999999998
Q ss_pred CcHHHHHHHHHHHHHHHH
Q 048393 345 ERGKEIKQNADKWRNFAK 362 (369)
Q Consensus 345 ~~~~~~~~~a~~l~~~~~ 362 (369)
+ +|+++++++++.++
T Consensus 352 ~---~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 352 P---GIRARAAAVAGTIR 366 (404)
T ss_dssp H---HHHHHHHHHHTTCC
T ss_pred H---HHHHHHHHHHHHHh
Confidence 7 89999988877553
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.96 E-value=1.3e-27 Score=226.79 Aligned_cols=278 Identities=15% Similarity=0.187 Sum_probs=188.9
Q ss_pred HHHHHHHHhcCCCCEEEEC-CCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCCCCcccCCCCCCCCCCC
Q 048393 23 QTFTELVERMNDVDCIVYD-SFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLTGDEVLLPGLPPLDPQD 101 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~ 101 (369)
+.+.+++++. +||+||+| ....++..+|+.+|||++.+.+...... . .. .. +.+.......
T Consensus 92 ~~l~~~l~~~-~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~--------~-~~------~~--~~~~~~~~~~ 153 (402)
T 3ia7_A 92 RAAEEALGDN-PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANE--------H-YS------LF--KELWKSNGQR 153 (402)
T ss_dssp HHHHHHHTTC-CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBT--------T-BC------HH--HHHHHHHTCC
T ss_pred HHHHHHHhcc-CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCc--------c-cc------cc--cccccccccc
Confidence 4455566555 99999999 7888899999999999998764431100 0 00 00 0000000000
Q ss_pred CCCccCCCCCchhHHHHHHHHHhhcc----------cc-ccEEEecchHhhhHHHHHHHhcCCCceeeeCccCCCccccc
Q 048393 102 TPSFINDPASYPAFFDMIVTRQFYNI----------DK-ADWILCNTFYELEKEVTEWLGKQHWLLRTIGPTLPSIYLDK 170 (369)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~li~s~~ele~~~~~~~~~~~~~~~~vGp~~~~~~~~~ 170 (369)
.+. ....+...+ .+..... .. .+..++.+..+++.. . ...+.++.++||....
T Consensus 154 ~~~------~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-~---~~~~~~~~~vGp~~~~----- 217 (402)
T 3ia7_A 154 HPA------DVEAVHSVL-VDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-A---ETFDERFAFVGPTLTG----- 217 (402)
T ss_dssp CGG------GSHHHHHHH-HHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-G---GGCCTTEEECCCCCCC-----
T ss_pred Chh------hHHHHHHHH-HHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-c---ccCCCCeEEeCCCCCC-----
Confidence 000 000111111 1111110 11 145555555555531 1 1112348899987643
Q ss_pred cccccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhc
Q 048393 171 QIEDDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSD 250 (369)
Q Consensus 171 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~ 250 (369)
..+...|....+++++||+++||........+..+++++...+..++|.++..... +. ..
T Consensus 218 ----------------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~-~~ 277 (402)
T 3ia7_A 218 ----------------RDGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP---AV-LG 277 (402)
T ss_dssp --------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG---GG-GC
T ss_pred ----------------cccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh---hh-hC
Confidence 11112344334567899999999987777778999999988889999988754211 11 12
Q ss_pred ccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCC-CCChhHHHHHHHhhcCceEEecCCCCCCc
Q 048393 251 ETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQ-WSDQSTNAKYIMDVGKMGLKVPADEKGIV 329 (369)
Q Consensus 251 ~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~-~~dQ~~na~~~~~~~g~g~~~~~~~~~~~ 329 (369)
+.++|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|. ..||..||+++++. |+|+.+..+ ++
T Consensus 278 ~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~~---~~ 351 (402)
T 3ia7_A 278 PLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRPD---QL 351 (402)
T ss_dssp SCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCGG---GC
T ss_pred CCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccCC---CC
Confidence 24578899999999999999999 9999999999999999999999999 99999999999999 999999876 78
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 048393 330 RREAIAHCINEILEGERGKEIKQNADKWRNFAKE 363 (369)
Q Consensus 330 ~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 363 (369)
+.+.|.++|.++++|+ .++++++++++.+.+
T Consensus 352 ~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~ 382 (402)
T 3ia7_A 352 EPASIREAVERLAADS---AVRERVRRMQRDILS 382 (402)
T ss_dssp SHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh
Confidence 9999999999999998 888988888877653
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.96 E-value=3.6e-28 Score=234.08 Aligned_cols=160 Identities=18% Similarity=0.249 Sum_probs=131.0
Q ss_pred HHHHhccCCCCceEEEEeCccccC---CHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHH
Q 048393 190 CMKWLNDRANGSVVYVSFGSMATL---KMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLG 266 (369)
Q Consensus 190 ~~~~l~~~~~~~~i~vs~Gs~~~~---~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 266 (369)
+.+|++..+++++|||++||.... ..+.+..+++++...+++++|+.+......+. ..++|+++.+|+||.+
T Consensus 257 ~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~-----~~~~~v~~~~~~~~~~ 331 (441)
T 2yjn_A 257 VPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVA-----NIPDNVRTVGFVPMHA 331 (441)
T ss_dssp CCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCS-----SCCSSEEECCSCCHHH
T ss_pred cchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhc-----cCCCCEEEecCCCHHH
Confidence 456887656678999999999753 22346778888988899999998854332221 2356889999999999
Q ss_pred hhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 267 VLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 267 iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
+|+++++ ||||||+||++||+++|||+|++|...||..||+++++. |+|+.+... .++.+.|.++|.++++|+
T Consensus 332 ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~---~~~~~~l~~~i~~ll~~~- 404 (441)
T 2yjn_A 332 LLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVP---ELTPDQLRESVKRVLDDP- 404 (441)
T ss_dssp HGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTT---TCCHHHHHHHHHHHHHCH-
T ss_pred HHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcccc---cCCHHHHHHHHHHHhcCH-
Confidence 9999988 999999999999999999999999999999999999999 999999876 789999999999999998
Q ss_pred HHHHHHHHHHHHHHHHH
Q 048393 347 GKEIKQNADKWRNFAKE 363 (369)
Q Consensus 347 ~~~~~~~a~~l~~~~~~ 363 (369)
+++++++++++.++.
T Consensus 405 --~~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 405 --AHRAGAARMRDDMLA 419 (441)
T ss_dssp --HHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHc
Confidence 899999888877653
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.96 E-value=5.3e-28 Score=228.57 Aligned_cols=258 Identities=19% Similarity=0.176 Sum_probs=186.0
Q ss_pred HHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCCCCcccCCCCCCCCCCC
Q 048393 22 LQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLTGDEVLLPGLPPLDPQD 101 (369)
Q Consensus 22 ~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~ 101 (369)
...+.+++++. +||+||+|.+..++..+|+.+|||++.+...+. ..++
T Consensus 96 ~~~l~~~l~~~-~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~-----------------------~~~~-------- 143 (384)
T 2p6p_A 96 LPRMLDFSRAW-RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV-----------------------DADG-------- 143 (384)
T ss_dssp HHHHHHHHHHH-CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC-----------------------CCTT--------
T ss_pred HHHHHHHHhcc-CCcEEEECcchhhHHHHHHhcCCCEEEeccCCc-----------------------ccch--------
Confidence 34555566666 899999998888899999999999998753220 0000
Q ss_pred CCCccCCCCCchhHHHHHHHHHhhcc-----ccccEEEecchHhhhHHHHHHHhcCCCceeeeCccCCCccccccccccc
Q 048393 102 TPSFINDPASYPAFFDMIVTRQFYNI-----DKADWILCNTFYELEKEVTEWLGKQHWLLRTIGPTLPSIYLDKQIEDDK 176 (369)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~li~s~~ele~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~ 176 (369)
+ ...+.... .+..... ...+.+++++.+.+++.. ..+ ..++.++++ .
T Consensus 144 ---~------~~~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~--~~~--~~~~~~~~~---~----------- 195 (384)
T 2p6p_A 144 ---I------HPGADAEL-RPELSELGLERLPAPDLFIDICPPSLRPAN--AAP--ARMMRHVAT---S----------- 195 (384)
T ss_dssp ---T------HHHHHHHT-HHHHHHTTCSSCCCCSEEEECSCGGGSCTT--SCC--CEECCCCCC---C-----------
T ss_pred ---h------hHHHHHHH-HHHHHHcCCCCCCCCCeEEEECCHHHCCCC--CCC--CCceEecCC---C-----------
Confidence 0 01111111 1111111 115678888887776411 001 011222211 0
Q ss_pred cccccccccChhHHHHHhccCCCCceEEEEeCccccC-----CHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcc
Q 048393 177 EYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATL-----KMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDE 251 (369)
Q Consensus 177 ~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~-----~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 251 (369)
.+.++.+|++..+++++|||++||.... +.+.+..+++++...+.+++|+.+.... +.+ ..
T Consensus 196 ---------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~----~~l-~~ 261 (384)
T 2p6p_A 196 ---------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVA----EAL-RA 261 (384)
T ss_dssp ---------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHH----HHH-HH
T ss_pred ---------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCH----Hhh-CC
Confidence 0123446777645667999999999864 3466888999998889999999774311 111 12
Q ss_pred cCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCH
Q 048393 252 TSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRR 331 (369)
Q Consensus 252 ~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~ 331 (369)
.++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||+++++. |+|+.+... .++.
T Consensus 262 ~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-g~g~~~~~~---~~~~ 334 (384)
T 2p6p_A 262 EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-GAAIALLPG---EDST 334 (384)
T ss_dssp HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTT---CCCH
T ss_pred CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC-CCeEecCcC---CCCH
Confidence 4578999 99999999999988 999999999999999999999999999999999999999 999999865 6899
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 048393 332 EAIAHCINEILEGERGKEIKQNADKWRNFAKE 363 (369)
Q Consensus 332 ~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 363 (369)
++|.++|+++++|+ .++++++++++.++.
T Consensus 335 ~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 335 EAIADSCQELQAKD---TYARRAQDLSREISG 363 (384)
T ss_dssp HHHHHHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 99999999999998 899999999988864
No 15
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.8e-28 Score=203.37 Aligned_cols=164 Identities=21% Similarity=0.372 Sum_probs=139.1
Q ss_pred cChhHHHHHhccCCCCceEEEEeCccc-cCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccC
Q 048393 185 TNIESCMKWLNDRANGSVVYVSFGSMA-TLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCP 263 (369)
Q Consensus 185 ~~~~~~~~~l~~~~~~~~i~vs~Gs~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 263 (369)
++++++.+|++..+++++|||++||.. ....+.+..+++++...+.+++|+.+...... .++|+.+.+|+|
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~--------~~~~v~~~~~~~ 77 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDT--------LGLNTRLYKWIP 77 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTT--------CCTTEEEESSCC
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCccc--------CCCcEEEecCCC
Confidence 458899999987667789999999997 34567788999999888899999987643221 235789999999
Q ss_pred hHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhc
Q 048393 264 QLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILE 343 (369)
Q Consensus 264 ~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~ 343 (369)
+.++|.|+..++||||||++|++||+++|+|+|++|...||..||+++++. |+|+.++.. .++.++|.++|.++++
T Consensus 78 ~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~---~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 78 QNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFN---TMSSTDLLNALKRVIN 153 (170)
T ss_dssp HHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTT---TCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccc---cCCHHHHHHHHHHHHc
Confidence 999996655666999999999999999999999999999999999999999 999999866 7899999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHH
Q 048393 344 GERGKEIKQNADKWRNFAKE 363 (369)
Q Consensus 344 ~~~~~~~~~~a~~l~~~~~~ 363 (369)
|+ .|+++++++++.+++
T Consensus 154 ~~---~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 154 DP---SYKENVMKLSRIQHD 170 (170)
T ss_dssp CH---HHHHHHHHHC-----
T ss_pred CH---HHHHHHHHHHHHhhC
Confidence 98 899999999998863
No 16
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.96 E-value=3.4e-27 Score=226.40 Aligned_cols=284 Identities=16% Similarity=0.170 Sum_probs=188.4
Q ss_pred cHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHHHHHHhhccCcCCCCCCCcccCCCCCCCCCC
Q 048393 21 GLQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVASIYHHVNKGLIKLPLTGDEVLLPGLPPLDPQ 100 (369)
Q Consensus 21 ~~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~ 100 (369)
....+.+++++. +||+||+|....++..+|+.+|||++.+++.................. .....++.
T Consensus 92 ~~~~l~~~l~~~-~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~------ 159 (430)
T 2iyf_A 92 ALPQLADAYADD-IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR-----EPRQTERG------ 159 (430)
T ss_dssp HHHHHHHHHTTS-CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH-----HHHHSHHH------
T ss_pred HHHHHHHHhhcc-CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhh-----hhccchHH------
Confidence 345566667666 899999998878899999999999999876552100000000000000 00000000
Q ss_pred CCCCccCCCCCchhHHHHHHHHHh------hccccccEEEecchHhhhHHHHHHHhcCCCc-eeeeCccCCCcccccccc
Q 048393 101 DTPSFINDPASYPAFFDMIVTRQF------YNIDKADWILCNTFYELEKEVTEWLGKQHWL-LRTIGPTLPSIYLDKQIE 173 (369)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~s~~ele~~~~~~~~~~~~~-~~~vGp~~~~~~~~~~~~ 173 (369)
..+ ...+.+.+ .+.. ......+.+++++.+++++.. .....+ ++++||.++..
T Consensus 160 ---~~~-----~~~~~~~~-~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~v~~vG~~~~~~------- 219 (430)
T 2iyf_A 160 ---RAY-----YARFEAWL-KENGITEHPDTFASHPPRSLVLIPKALQPHA----DRVDEDVYTFVGACQGDR------- 219 (430)
T ss_dssp ---HHH-----HHHHHHHH-HHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----GGSCTTTEEECCCCC----------
T ss_pred ---HHH-----HHHHHHHH-HHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----ccCCCccEEEeCCcCCCC-------
Confidence 000 00011111 1100 001145778999988887521 122234 88899865320
Q ss_pred ccccccccccccChhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhC-CCcEEEEEeCCccCCCCcchhccc
Q 048393 174 DDKEYGFSIFETNIESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKAS-DKYFLWVVRESEQSKLPENFSDET 252 (369)
Q Consensus 174 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~ 252 (369)
.+..+|....+++++||+++||........+..++++++.. +.+++|.++..... +.+ +..
T Consensus 220 --------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~---~~l-~~~ 281 (430)
T 2iyf_A 220 --------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP---AEL-GEL 281 (430)
T ss_dssp ----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG---GGG-CSC
T ss_pred --------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh---HHh-ccC
Confidence 00112433334567999999999854567788899999885 78898988764211 111 123
Q ss_pred CCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHH
Q 048393 253 SQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRRE 332 (369)
Q Consensus 253 ~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 332 (369)
++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|..+||..||+++++. |+|+.+..+ .++.+
T Consensus 282 ~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~~~~---~~~~~ 355 (430)
T 2iyf_A 282 PDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVARKLATE---EATAD 355 (430)
T ss_dssp CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCCC----CCHH
T ss_pred CCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCEEEcCCC---CCCHH
Confidence 468899999999999999998 999999999999999999999999999999999999999 999999866 68999
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 048393 333 AIAHCINEILEGERGKEIKQNADKWRNFAKE 363 (369)
Q Consensus 333 ~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 363 (369)
+|.++|.++++|+ .+++++.++++.+++
T Consensus 356 ~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 356 LLRETALALVDDP---EVARRLRRIQAEMAQ 383 (430)
T ss_dssp HHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 9999999999998 788888777776653
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.94 E-value=2.7e-26 Score=217.88 Aligned_cols=160 Identities=16% Similarity=0.251 Sum_probs=121.9
Q ss_pred HHHHhccCCCCceEEEEeCccccCC--------HHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEec
Q 048393 190 CMKWLNDRANGSVVYVSFGSMATLK--------MEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNW 261 (369)
Q Consensus 190 ~~~~l~~~~~~~~i~vs~Gs~~~~~--------~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (369)
+.+|+...+++++|||++||..... ...+..+++++...+.+++|+.+......+. ..++|+.+.+|
T Consensus 217 ~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~-----~~~~~v~~~~~ 291 (398)
T 4fzr_A 217 VPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQ-----PLPEGVLAAGQ 291 (398)
T ss_dssp CCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-------------CCTTEEEESC
T ss_pred CchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhc-----cCCCcEEEeCc
Confidence 3456665556789999999996432 2347888999988899999988765322221 23578899999
Q ss_pred cChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHH
Q 048393 262 CPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEI 341 (369)
Q Consensus 262 ~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~ 341 (369)
+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..||+++++. |+|+.+... .++.+.|.++|.++
T Consensus 292 ~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~---~~~~~~l~~ai~~l 365 (398)
T 4fzr_A 292 FPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPWE---QAGVESVLAACARI 365 (398)
T ss_dssp CCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC----------CHHHHHHHH
T ss_pred CCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCcc---cCCHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999999999 999999876 67999999999999
Q ss_pred hcCCcHHHHHHHHHHHHHHHHH
Q 048393 342 LEGERGKEIKQNADKWRNFAKE 363 (369)
Q Consensus 342 l~~~~~~~~~~~a~~l~~~~~~ 363 (369)
++|+ .++++++++++.+++
T Consensus 366 l~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 366 RDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHCT---HHHHHHHHHHHHHTT
T ss_pred HhCH---HHHHHHHHHHHHHHc
Confidence 9999 899999888887653
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.93 E-value=5e-25 Score=209.20 Aligned_cols=154 Identities=19% Similarity=0.279 Sum_probs=129.1
Q ss_pred HHhccCCCCceEEEEeCccccC--CHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhc
Q 048393 192 KWLNDRANGSVVYVSFGSMATL--KMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLA 269 (369)
Q Consensus 192 ~~l~~~~~~~~i~vs~Gs~~~~--~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~ 269 (369)
.|+...+++++|||++||.... ....+.++++++.+.+.+++|+.+......+ ...++|+.+.+|+|+.++|+
T Consensus 224 ~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l-----~~~~~~v~~~~~~~~~~ll~ 298 (398)
T 3oti_A 224 DRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPL-----GTLPRNVRAVGWTPLHTLLR 298 (398)
T ss_dssp SSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGG-----CSCCTTEEEESSCCHHHHHT
T ss_pred hhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhh-----ccCCCcEEEEccCCHHHHHh
Confidence 4555455678999999999643 4456788899998889999999876532211 12357889999999999999
Q ss_pred ccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHH--HHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH
Q 048393 270 HEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNA--KYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG 347 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na--~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~ 347 (369)
++++ ||||||.||++||+++|+|+|++|...||..|| +++++. |+|+.++.. +++.+.|. ++++|+
T Consensus 299 ~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~~---~~~~~~l~----~ll~~~-- 366 (398)
T 3oti_A 299 TCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR-GIGLVSTSD---KVDADLLR----RLIGDE-- 366 (398)
T ss_dssp TCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH-TSEEECCGG---GCCHHHHH----HHHHCH--
T ss_pred hCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC-CCEEeeCCC---CCCHHHHH----HHHcCH--
Confidence 9998 999999999999999999999999999999999 999999 999999866 67888777 788898
Q ss_pred HHHHHHHHHHHHHHHH
Q 048393 348 KEIKQNADKWRNFAKE 363 (369)
Q Consensus 348 ~~~~~~a~~l~~~~~~ 363 (369)
.++++++++++.+++
T Consensus 367 -~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 367 -SLRTAAREVREEMVA 381 (398)
T ss_dssp -HHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHh
Confidence 899999888887754
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.93 E-value=2.4e-24 Score=203.90 Aligned_cols=157 Identities=18% Similarity=0.229 Sum_probs=131.3
Q ss_pred HHhccCCCCceEEEEeCcccc--CC-HHHHHHHHHHHHhC-CCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHh
Q 048393 192 KWLNDRANGSVVYVSFGSMAT--LK-MEQMEELAWGLKAS-DKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGV 267 (369)
Q Consensus 192 ~~l~~~~~~~~i~vs~Gs~~~--~~-~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i 267 (369)
.|+...+++++||+++||... .. ...+.+++++ .+. +.+++|..+......+. ..++|+.+.+|+|+.++
T Consensus 210 ~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~-----~~~~~v~~~~~~~~~~l 283 (391)
T 3tsa_A 210 AWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLT-----DLPDNARIAESVPLNLF 283 (391)
T ss_dssp GGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCT-----TCCTTEEECCSCCGGGT
T ss_pred chhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcc-----cCCCCEEEeccCCHHHH
Confidence 466555567899999999953 23 5668888888 776 78999987764322222 23468899999999999
Q ss_pred hcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecC--CCCCCcCHHHHHHHHHHHhcCC
Q 048393 268 LAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPA--DEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 268 L~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~--~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
|+++++ ||||||.||++||+++|+|+|++|...||..|++++++. |+|+.+.. . ..+.+.|.++|.++++|+
T Consensus 284 l~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~---~~~~~~l~~ai~~ll~~~ 357 (391)
T 3tsa_A 284 LRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQA---QSDHEQFTDSIATVLGDT 357 (391)
T ss_dssp GGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSHHH---HTCHHHHHHHHHHHHTCT
T ss_pred HhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCcccc---cCCHHHHHHHHHHHHcCH
Confidence 999988 999999999999999999999999999999999999999 99999986 4 579999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 048393 346 RGKEIKQNADKWRNFAKE 363 (369)
Q Consensus 346 ~~~~~~~~a~~l~~~~~~ 363 (369)
.++++++++++.+.+
T Consensus 358 ---~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 358 ---GFAAAAIKLSDEITA 372 (391)
T ss_dssp ---HHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHc
Confidence 899988888777653
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.92 E-value=3.8e-23 Score=196.86 Aligned_cols=153 Identities=24% Similarity=0.315 Sum_probs=131.2
Q ss_pred CCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCc-cCCCCcchhcccCCCcEEEeccChHHhhcccCcCc
Q 048393 197 RANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESE-QSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGC 275 (369)
Q Consensus 197 ~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~ 275 (369)
.+++++|++++||........+.++++++.+.+..++|..+... ...+. ..++++.+.+|+|+.++|+++++
T Consensus 239 ~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~-----~~~~~v~~~~~~~~~~~l~~ad~-- 311 (412)
T 3otg_A 239 DTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLG-----EVPANVRLESWVPQAALLPHVDL-- 311 (412)
T ss_dssp CTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCC-----CCCTTEEEESCCCHHHHGGGCSE--
T ss_pred cCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhc-----cCCCcEEEeCCCCHHHHHhcCcE--
Confidence 34677999999999755667788999999988999999988653 22221 23568899999999999999999
Q ss_pred eeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 048393 276 FLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNAD 355 (369)
Q Consensus 276 ~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~ 355 (369)
||+|||++|++||+++|+|+|++|...||..|++.+++. |+|+.+... .++++.|.++|.++++|+ .+++++.
T Consensus 312 ~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~~---~~~~~~l~~ai~~ll~~~---~~~~~~~ 384 (412)
T 3otg_A 312 VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLPD---NISPDSVSGAAKRLLAEE---SYRAGAR 384 (412)
T ss_dssp EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCGG---GCCHHHHHHHHHHHHHCH---HHHHHHH
T ss_pred EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCcc---cCCHHHHHHHHHHHHhCH---HHHHHHH
Confidence 999999999999999999999999999999999999999 999999876 679999999999999998 7787777
Q ss_pred HHHHHHHH
Q 048393 356 KWRNFAKE 363 (369)
Q Consensus 356 ~l~~~~~~ 363 (369)
+.++.+.+
T Consensus 385 ~~~~~~~~ 392 (412)
T 3otg_A 385 AVAAEIAA 392 (412)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 77666543
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.82 E-value=1.3e-19 Score=169.87 Aligned_cols=151 Identities=15% Similarity=0.172 Sum_probs=116.5
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHh----CCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH-HhhcccC
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKA----SDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL-GVLAHEA 272 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~iL~~~~ 272 (369)
+++++++|..||.+....+ +.+.+++.. .+..++|+++....+...+. ....+.++.+.+|+++. ++|+.+|
T Consensus 178 ~~~~~ilv~gGs~g~~~~~--~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~-~~~~~~~~~v~~f~~dm~~~l~~aD 254 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEPLN--KLLPEALAQVPLEIRPAIRHQAGRQHAEITAER-YRTVAVEADVAPFISDMAAAYAWAD 254 (365)
T ss_dssp TSCCEEEECCTTTTCSHHH--HHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHH-HHHTTCCCEEESCCSCHHHHHHHCS
T ss_pred CCCcEEEEECCcCCccccc--hhhHHHHHhcccccceEEEEecCccccccccce-ecccccccccccchhhhhhhhccce
Confidence 4567899999998764433 334455543 34678888776532211111 12334578899999987 8999999
Q ss_pred cCceeecCChhhHHHHHhhCCceeecCCC----CChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-
Q 048393 273 TGCFLTHCGWNSTMEALGLGVPMLAMPQW----SDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG- 347 (369)
Q Consensus 273 ~~~~I~hgG~~s~~eal~~GvP~i~~P~~----~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~- 347 (369)
+ +|||+|.+|++|++++|+|+|++|+. .+|..||+.+++. |+|+.+... +++++.|.++|.++++|++.
T Consensus 255 l--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~~---~~~~~~L~~~i~~ll~d~~~~ 328 (365)
T 3s2u_A 255 L--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQK---STGAAELAAQLSEVLMHPETL 328 (365)
T ss_dssp E--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCTT---TCCHHHHHHHHHHHHHCTHHH
T ss_pred E--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeecC---CCCHHHHHHHHHHHHCCHHHH
Confidence 9 99999999999999999999999974 5899999999999 999999877 78999999999999999865
Q ss_pred HHHHHHHHHH
Q 048393 348 KEIKQNADKW 357 (369)
Q Consensus 348 ~~~~~~a~~l 357 (369)
+.|+++++++
T Consensus 329 ~~m~~~a~~~ 338 (365)
T 3s2u_A 329 RSMADQARSL 338 (365)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 6777777665
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.64 E-value=4.5e-16 Score=134.09 Aligned_cols=132 Identities=11% Similarity=0.151 Sum_probs=95.2
Q ss_pred CCCCceEEEEeCccccCCHHHHHHH-----HHHHHhCC-CcEEEEEeCCccCCCCcchhcc-------------------
Q 048393 197 RANGSVVYVSFGSMATLKMEQMEEL-----AWGLKASD-KYFLWVVRESEQSKLPENFSDE------------------- 251 (369)
Q Consensus 197 ~~~~~~i~vs~Gs~~~~~~~~~~~~-----~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~------------------- 251 (369)
.+++++|||++||.... ...+..+ +++|.+.+ .+++|++|........ .....
T Consensus 25 ~~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~-~~~~~~~~~~~~~l~p~~~~~~~~ 102 (224)
T 2jzc_A 25 IIEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFE-HLVQERGGQRESQKIPIDQFGCGD 102 (224)
T ss_dssp CCCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCC-SHHHHHTCEECSCCCSSCTTCTTC
T ss_pred CCCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHH-HHHHhhhccccccccccccccccc
Confidence 34677999999998422 2333333 47787777 7999999876431111 00000
Q ss_pred -------cCC--CcEEEeccChH-Hhhc-ccCcCceeecCChhhHHHHHhhCCceeecCCC----CChhHHHHHHHhhcC
Q 048393 252 -------TSQ--KGLVVNWCPQL-GVLA-HEATGCFLTHCGWNSTMEALGLGVPMLAMPQW----SDQSTNAKYIMDVGK 316 (369)
Q Consensus 252 -------~~~--~~~~~~~~p~~-~iL~-~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~----~dQ~~na~~~~~~~g 316 (369)
... ++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++++. |
T Consensus 103 ~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G 179 (224)
T 2jzc_A 103 TARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-G 179 (224)
T ss_dssp SCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-S
T ss_pred cccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-C
Confidence 011 34456788877 8999 9999 99999999999999999999999984 3699999999999 9
Q ss_pred ceEEecCCCCCCcCHHHHHHHHHHH
Q 048393 317 MGLKVPADEKGIVRREAIAHCINEI 341 (369)
Q Consensus 317 ~g~~~~~~~~~~~~~~~l~~~i~~~ 341 (369)
+++.+ +.+.|.++|.++
T Consensus 180 ~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 180 YVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp CCCEE--------CSCTTTHHHHHH
T ss_pred CEEEc--------CHHHHHHHHHHH
Confidence 98765 334566666666
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.49 E-value=9.6e-13 Score=122.58 Aligned_cols=149 Identities=13% Similarity=0.077 Sum_probs=106.8
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHhC--CCcEEEEEeCCccCCCCcchhcccC-CCcEEEeccCh-HHhhcccCc
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKAS--DKYFLWVVRESEQSKLPENFSDETS-QKGLVVNWCPQ-LGVLAHEAT 273 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~-~~iL~~~~~ 273 (369)
++++++++..|+... ......+++++... +..+++.+|......+.+.. .+.. +++.+.+|+++ .++|+.+++
T Consensus 181 ~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~-~~~~~~~v~~~g~~~~~~~~~~~ad~ 257 (364)
T 1f0k_A 181 EGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAY-AEAGQPQHKVTEFIDDMAAAYAWADV 257 (364)
T ss_dssp CSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHH-HHTTCTTSEEESCCSCHHHHHHHCSE
T ss_pred CCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHH-hhcCCCceEEecchhhHHHHHHhCCE
Confidence 345578888888753 33344455555443 46667777765321111111 1112 47899999965 489999999
Q ss_pred CceeecCChhhHHHHHhhCCceeecCCC---CChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc-HHH
Q 048393 274 GCFLTHCGWNSTMEALGLGVPMLAMPQW---SDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER-GKE 349 (369)
Q Consensus 274 ~~~I~hgG~~s~~eal~~GvP~i~~P~~---~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~ 349 (369)
+|+++|.+++.||+++|+|+|+.|.. .||..|++.+.+. |.|+.++.. +++.+.|.++|.++ |++ .+.
T Consensus 258 --~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~~---d~~~~~la~~i~~l--~~~~~~~ 329 (364)
T 1f0k_A 258 --VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQP---QLSVDAVANTLAGW--SRETLLT 329 (364)
T ss_dssp --EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCGG---GCCHHHHHHHHHTC--CHHHHHH
T ss_pred --EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEeccc---cCCHHHHHHHHHhc--CHHHHHH
Confidence 99999999999999999999999987 7899999999999 999998865 56799999999988 652 244
Q ss_pred HHHHHHHH
Q 048393 350 IKQNADKW 357 (369)
Q Consensus 350 ~~~~a~~l 357 (369)
+.++++++
T Consensus 330 ~~~~~~~~ 337 (364)
T 1f0k_A 330 MAERARAA 337 (364)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 55555443
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.35 E-value=1.1e-11 Score=111.06 Aligned_cols=115 Identities=10% Similarity=0.071 Sum_probs=87.8
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhc--ccCCCcEEEeccChH-HhhcccCcCc
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSD--ETSQKGLVVNWCPQL-GVLAHEATGC 275 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~-~iL~~~~~~~ 275 (369)
+.+.|+|++|..... +...++++++.... ++.++.+.... ..+.+.+ ....|+.+..|+++. ++++.+|+
T Consensus 156 ~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~--~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl-- 228 (282)
T 3hbm_A 156 KKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP--NLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK-- 228 (282)
T ss_dssp CCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT--THHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--
T ss_pred cCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch--HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--
Confidence 345899999976533 35556777776543 56666665422 1122211 112478899999988 89999999
Q ss_pred eeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEec
Q 048393 276 FLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVP 322 (369)
Q Consensus 276 ~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~ 322 (369)
+||+|| +|++|+++.|+|+|++|...+|..||+.+++. |+++.+.
T Consensus 229 vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~ 273 (282)
T 3hbm_A 229 LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYK 273 (282)
T ss_dssp EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECG
T ss_pred EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcc
Confidence 999999 89999999999999999999999999999999 9999886
No 25
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.92 E-value=3.9e-08 Score=92.74 Aligned_cols=130 Identities=15% Similarity=0.174 Sum_probs=82.7
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCccCCCCcchhc--ccCCCcEEEeccC---hHHhh
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKA-----SDKYFLWVVRESEQSKLPENFSD--ETSQKGLVVNWCP---QLGVL 268 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p---~~~iL 268 (369)
++++++++.+-....... +..+++++.. .+..+++..+.+. ...+.+.+ ...+++.+.++++ ...++
T Consensus 229 ~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~--~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYPVHLNP--NVREPVNKLLKGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp TSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHTTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEEeCCCh--HHHHHHHHHHcCCCCEEEeCCCCHHHHHHHH
Confidence 456777766332222222 4455555543 3567776655321 01111111 1235788877764 33789
Q ss_pred cccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 269 AHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+.+++ +|+-.| |.+.||.++|+|+|+....+++. .+.+. |.++.+. . +.++|.+++.++++|+
T Consensus 306 ~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~-----~-d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 306 DRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVG-----T-NQQQICDALSLLLTDP 368 (396)
T ss_dssp HHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECT-----T-CHHHHHHHHHHHHHCH
T ss_pred HhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcC-----C-CHHHHHHHHHHHHcCH
Confidence 99999 999988 55579999999999986656653 24566 8776654 2 6899999999999987
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.83 E-value=9.8e-07 Score=82.31 Aligned_cols=154 Identities=16% Similarity=0.122 Sum_probs=92.7
Q ss_pred HHHHHhccCCCCceEEEEeCcccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCc-cCCCCcchhcccCCCcEEEeccCh
Q 048393 189 SCMKWLNDRANGSVVYVSFGSMAT-LKMEQMEELAWGLKA--SDKYFLWVVRESE-QSKLPENFSDETSQKGLVVNWCPQ 264 (369)
Q Consensus 189 ~~~~~l~~~~~~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~ 264 (369)
.+.+-+... ++..+++..|+... .....+-+.+..+.+ .+..+++. |... ...+. .......+++.+.+|+|+
T Consensus 187 ~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~~~~~l~-~~~~~~~~~v~~~g~~~~ 263 (394)
T 3okp_A 187 ATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GSGRYESTLR-RLATDVSQNVKFLGRLEY 263 (394)
T ss_dssp HHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CCCTTHHHHH-HHTGGGGGGEEEEESCCH
T ss_pred HHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cCchHHHHHH-HHHhcccCeEEEcCCCCH
Confidence 334444332 34467777888752 233333333333332 34555544 4321 11111 111223467889999975
Q ss_pred H---HhhcccCcCceee-----------cCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcC
Q 048393 265 L---GVLAHEATGCFLT-----------HCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVR 330 (369)
Q Consensus 265 ~---~iL~~~~~~~~I~-----------hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~ 330 (369)
. ++++.+++ +|. -|..+++.||+++|+|+|+.+..+-. . +.+. |.|+.++.. +
T Consensus 264 ~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~----e-~i~~-~~g~~~~~~-----d 330 (394)
T 3okp_A 264 QDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAP----E-TVTP-ATGLVVEGS-----D 330 (394)
T ss_dssp HHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGG----G-GCCT-TTEEECCTT-----C
T ss_pred HHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChH----H-HHhc-CCceEeCCC-----C
Confidence 5 58899999 776 56668999999999999997754321 1 1223 568887743 8
Q ss_pred HHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Q 048393 331 REAIAHCINEILEGERG-KEIKQNADKWR 358 (369)
Q Consensus 331 ~~~l~~~i~~~l~~~~~-~~~~~~a~~l~ 358 (369)
.+++.++|.++++|++. +.+.+++++..
T Consensus 331 ~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 359 (394)
T 3okp_A 331 VDKLSELLIELLDDPIRRAAMGAAGRAHV 359 (394)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999999998743 55555655543
No 27
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.77 E-value=2.9e-07 Score=86.89 Aligned_cols=131 Identities=12% Similarity=0.176 Sum_probs=83.1
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCccCCCCcchhc--ccCCCcEEEeccCh---HHhh
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKA-----SDKYFLWVVRESEQSKLPENFSD--ETSQKGLVVNWCPQ---LGVL 268 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~---~~iL 268 (369)
++++++++.|....... .+..+++++.. .+..+++..+.+. .+.+.+.+ ...+++.+.+++++ ..++
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~ 299 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNP--AVREKAMAILGGHERIHLIEPLDAIDFHNFL 299 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCH--HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHH
Confidence 45577777664321111 13444444432 3567776655331 01111111 12257888888863 2788
Q ss_pred cccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 269 AHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
+++++ +|+-.|..+ .||.++|+|+|+.|..+++.. +.+. |.|+.+. . +.++|.+++.++++|++
T Consensus 300 ~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~-----~-d~~~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 300 RKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG-----T-NKENLIKEALDLLDNKE 363 (403)
T ss_dssp HHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC-----S-CHHHHHHHHHHHHHCHH
T ss_pred HhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC-----C-CHHHHHHHHHHHHcCHH
Confidence 99998 999875333 699999999999976666554 2467 8887765 2 78999999999998873
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.75 E-value=1.5e-06 Score=80.89 Aligned_cols=130 Identities=15% Similarity=0.204 Sum_probs=83.1
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCccCCCCcchhcc--cCCCcEEEeccCh---HHhh
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKA-----SDKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQ---LGVL 268 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~---~~iL 268 (369)
++++|+++.|...... .+..+++++.. .+..+++..+.+. .+.+.+.+. ..+++.+.++++. .++|
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--VVREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--HHHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 3457777777553221 23444444432 2456655545331 011111111 1257888855544 3899
Q ss_pred cccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 269 AHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
+.+++ ||+.+| |.+.||+++|+|+|+.+..+++.. +.+. |.|+.+. .+.+.|.++|.++++|++
T Consensus 273 ~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~------~d~~~la~~i~~ll~d~~ 336 (376)
T 1v4v_A 273 RASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG------TDPEGVYRVVKGLLENPE 336 (376)
T ss_dssp HTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC------SCHHHHHHHHHHHHTCHH
T ss_pred HhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC------CCHHHHHHHHHHHHhChH
Confidence 99999 999884 446699999999999887666655 2456 8888774 278999999999999873
No 29
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.68 E-value=1.6e-06 Score=81.24 Aligned_cols=142 Identities=16% Similarity=0.147 Sum_probs=89.6
Q ss_pred eEEEEeCcc-cc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH---HhhcccCcC
Q 048393 202 VVYVSFGSM-AT-LKMEQMEELAWGLKA--SDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL---GVLAHEATG 274 (369)
Q Consensus 202 ~i~vs~Gs~-~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~~~ 274 (369)
.+++..|+. .. .....+-+.+..+.+ .+..+++ +|......+.. ...+..+++.+.+++++. ++++.+++
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~~~~~~l~~-~~~~~~~~v~~~g~~~~~~~~~~~~~adv- 285 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILI-VGRGDEDELRE-QAGDLAGHLRFLGQVDDATKASAMRSADV- 285 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEE-ESCSCHHHHHH-HTGGGGGGEEECCSCCHHHHHHHHHHSSE-
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEE-EcCCcHHHHHH-HHHhccCcEEEEecCCHHHHHHHHHHCCE-
Confidence 567777887 42 333333333333433 2445443 34432111111 111124678889999865 78999999
Q ss_pred ceeec----CC-hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH-H
Q 048393 275 CFLTH----CG-WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG-K 348 (369)
Q Consensus 275 ~~I~h----gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~ 348 (369)
+|.- .| .+++.||+++|+|+|+.+. ....+.+.+. ..|+.++.. +.+++.++|.++++|++. .
T Consensus 286 -~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~~-----d~~~l~~~i~~l~~~~~~~~ 354 (406)
T 2gek_A 286 -YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPVD-----DADGMAAALIGILEDDQLRA 354 (406)
T ss_dssp -EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCTT-----CHHHHHHHHHHHHHCHHHHH
T ss_pred -EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCCC-----CHHHHHHHHHHHHcCHHHHH
Confidence 6643 33 3589999999999999765 4566777766 778888743 789999999999998742 4
Q ss_pred HHHHHHHHH
Q 048393 349 EIKQNADKW 357 (369)
Q Consensus 349 ~~~~~a~~l 357 (369)
.+.+++++.
T Consensus 355 ~~~~~~~~~ 363 (406)
T 2gek_A 355 GYVARASER 363 (406)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455555443
No 30
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.67 E-value=8.3e-07 Score=83.16 Aligned_cols=132 Identities=15% Similarity=0.177 Sum_probs=83.6
Q ss_pred CceEEEEeCccccCCH-HHHHHHHHHHHhC----CCcEEEEEeCCccCCCCcch-h-cccCCCcEEEeccC---hHHhhc
Q 048393 200 GSVVYVSFGSMATLKM-EQMEELAWGLKAS----DKYFLWVVRESEQSKLPENF-S-DETSQKGLVVNWCP---QLGVLA 269 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~-~~~~~~~~~l~~~----~~~~i~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~p---~~~iL~ 269 (369)
++.++++.|....... ..+..+++++... +..+++..+......+. .+ . ....+++++.+.++ ...+++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~-~~~~~~~~~~~v~l~~~lg~~~~~~l~~ 281 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLE-DLEGFKELGDKIRFLPAFSFTDYVKLQM 281 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHH-TSGGGGGTGGGEEECCCCCHHHHHHHHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHH-HHHHHhcCCCCEEEEcCCCHHHHHHHHH
Confidence 5688888887643322 3455666665432 57788766532110010 00 0 00124677765544 347899
Q ss_pred ccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 270 HEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
++++ +||-.|. .+.||.++|+|+|.++...+.+. ..+. |.++.+. .+.++|.+++.++++|++
T Consensus 282 ~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~------~d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 282 NAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG------FKAERVLQAVKTITEEHD 344 (385)
T ss_dssp HCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC------SSHHHHHHHHHHHHTTCB
T ss_pred hCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC------CCHHHHHHHHHHHHhChH
Confidence 9999 9999876 46999999999999987655222 2456 8776664 378999999999998763
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.63 E-value=2e-06 Score=80.06 Aligned_cols=131 Identities=17% Similarity=0.216 Sum_probs=84.5
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCccCCCCcchhcc--cCCCcEEEeccCh---HHhh
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKA-----SDKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQ---LGVL 268 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~---~~iL 268 (369)
++++++++.|+...... .+..+++++.. .+..+++..+... .+.+.+.+. ..+++.+.++++. .++|
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~--~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNP--NVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCH--HHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 35578888887654322 23444444432 2456665434221 011111111 1257888666653 3789
Q ss_pred cccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCc
Q 048393 269 AHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGER 346 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 346 (369)
+.+++ ||+.+| +.+.||+++|+|+|+.+..+... .+.+. |.|+.++ . +.++|.++|.++++|++
T Consensus 281 ~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~-----~-d~~~la~~i~~ll~d~~ 344 (384)
T 1vgv_A 281 NHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVG-----T-DKQRIVEEVTRLLKDEN 344 (384)
T ss_dssp HHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEEC-----S-SHHHHHHHHHHHHHCHH
T ss_pred HhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeC-----C-CHHHHHHHHHHHHhChH
Confidence 99999 999985 45889999999999998744433 34566 8888886 3 78999999999999873
No 32
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.55 E-value=2e-05 Score=74.68 Aligned_cols=96 Identities=16% Similarity=0.130 Sum_probs=71.7
Q ss_pred CCCcEEEeccChH---HhhcccCcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCC
Q 048393 253 SQKGLVVNWCPQL---GVLAHEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADE 325 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 325 (369)
.+++.+.+++|+. ++|+.+++ +|.- |..+++.||+++|+|+|+.+. ......+++. +.|+.++..
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~~- 376 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDGH- 376 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESSC-
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCCC-
Confidence 4678999999764 68899998 6654 335689999999999999764 3455566666 678888743
Q ss_pred CCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHHHH
Q 048393 326 KGIVRREAIAHCINEILEGERG-KEIKQNADKWRNF 360 (369)
Q Consensus 326 ~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~~ 360 (369)
+.+++.++|.++++|++. ..+.+++++..+.
T Consensus 377 ----d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 377 ----SPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp ----CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 899999999999998743 5566666555443
No 33
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.52 E-value=4.8e-07 Score=75.01 Aligned_cols=140 Identities=12% Similarity=0.125 Sum_probs=90.6
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhC-CCcEEEEEeCCccCCCCcchh---cccCCCcEEEeccCh---HHhhcccCcC
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKAS-DKYFLWVVRESEQSKLPENFS---DETSQKGLVVNWCPQ---LGVLAHEATG 274 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~---~~iL~~~~~~ 274 (369)
.+++..|+... ...+..+++++... +.++++.-.......+..... ....+++.+.+|+++ ..+++.+++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi- 100 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG- 100 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE-
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE-
Confidence 45667787753 22355666777665 556655433222211111111 123468999999997 378999998
Q ss_pred ceee---cCC-hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHH
Q 048393 275 CFLT---HCG-WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEI 350 (369)
Q Consensus 275 ~~I~---hgG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 350 (369)
+|. +.| ..++.||+++|+|+|+... ..+...+++. +.|+.+ .. +.+++.++|.++++|++ .+
T Consensus 101 -~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~~-----d~~~l~~~i~~l~~~~~--~~ 166 (177)
T 2f9f_A 101 -LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-NA-----DVNEIIDAMKKVSKNPD--KF 166 (177)
T ss_dssp -EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-CS-----CHHHHHHHHHHHHHCTT--TT
T ss_pred -EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-CC-----CHHHHHHHHHHHHhCHH--HH
Confidence 665 233 4599999999999999753 4566666666 788888 43 88999999999998873 22
Q ss_pred HHHHHHHH
Q 048393 351 KQNADKWR 358 (369)
Q Consensus 351 ~~~a~~l~ 358 (369)
++++++.+
T Consensus 167 ~~~~~~~a 174 (177)
T 2f9f_A 167 KKDCFRRA 174 (177)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.49 E-value=3.6e-05 Score=71.20 Aligned_cols=130 Identities=19% Similarity=0.204 Sum_probs=81.3
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCccCCCCcchhcc--cCCCcEEEeccChH---Hhh
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKA-----SDKYFLWVVRESEQSKLPENFSDE--TSQKGLVVNWCPQL---GVL 268 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~---~iL 268 (369)
++++++++.|...... ..+..+++++.. .+..+++ +......+.+.+.+. ..+++.+.+++++. .+|
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 3457777888765322 224455555542 2445443 322111111111111 12578887777643 788
Q ss_pred cccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 269 AHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+.+++ ||+..| +.+.||+++|+|+|+.+..+.. ..+.+. |.|+.++ . +.++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~-----~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 281 ARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAG-----T-DEETIFSLADELLSDK 343 (375)
T ss_dssp HTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECC-----S-CHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcC-----C-CHHHHHHHHHHHHhCh
Confidence 99999 998873 5688999999999988543333 224556 8888775 3 7899999999999887
No 35
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.48 E-value=1.6e-05 Score=74.33 Aligned_cols=93 Identities=16% Similarity=0.141 Sum_probs=67.6
Q ss_pred CCcEEEeccChH-HhhcccCcCcee----ecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCC
Q 048393 254 QKGLVVNWCPQL-GVLAHEATGCFL----THCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGI 328 (369)
Q Consensus 254 ~~~~~~~~~p~~-~iL~~~~~~~~I----~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 328 (369)
+++.+.++..+. ++++.+++ +| .-|..+++.||+++|+|+|+.+..+ ..+.+++. +.|+.++..
T Consensus 267 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~-~~g~~~~~~---- 335 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHG-DTGYLCEVG---- 335 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBT-TTEEEECTT----
T ss_pred CeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcC-CceEEeCCC----
Confidence 467777776544 89999999 77 5566789999999999999977532 22334444 678888743
Q ss_pred cCHHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Q 048393 329 VRREAIAHCINEILEGERG-KEIKQNADKWR 358 (369)
Q Consensus 329 ~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~ 358 (369)
+.+++.++|.++++|++. ..+.+++++..
T Consensus 336 -d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 336 -DTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp -CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 789999999999998743 45555555543
No 36
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.35 E-value=4.5e-05 Score=71.93 Aligned_cols=155 Identities=14% Similarity=0.169 Sum_probs=94.1
Q ss_pred hHHHHHhccCCCCceEEEEeCccc-c-CCHHHHHHHHHHHHh----CCCcEEEEEeCCccC--CCCcchhcccCCCcEEE
Q 048393 188 ESCMKWLNDRANGSVVYVSFGSMA-T-LKMEQMEELAWGLKA----SDKYFLWVVRESEQS--KLPENFSDETSQKGLVV 259 (369)
Q Consensus 188 ~~~~~~l~~~~~~~~i~vs~Gs~~-~-~~~~~~~~~~~~l~~----~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~ 259 (369)
..+.+-+... ++ .+++..|+.. . .....+-+.+..+.. .+.++++ +|..... ..-.....+.++++.+.
T Consensus 240 ~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i-~G~g~~~~~~~l~~~~~~~~~~~~~~ 316 (439)
T 3fro_A 240 KSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFII-IGKGDPELEGWARSLEEKHGNVKVIT 316 (439)
T ss_dssp HHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEE-ECCCCHHHHHHHHHHHHHCTTEEEEC
T ss_pred HHHHHHcCCC-CC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEE-EcCCChhHHHHHHHHHhhcCCEEEEc
Confidence 3344444433 34 7788888886 3 344444444444544 3444443 3433210 00011112233344567
Q ss_pred eccChH---HhhcccCcCceee----cCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHH
Q 048393 260 NWCPQL---GVLAHEATGCFLT----HCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRRE 332 (369)
Q Consensus 260 ~~~p~~---~iL~~~~~~~~I~----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 332 (369)
+|+|+. ++++.+++ +|. -|-.+++.||+++|+|+|+... ......+ +. |.|..++.. +.+
T Consensus 317 g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~~~-----d~~ 383 (439)
T 3fro_A 317 EMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKAG-----DPG 383 (439)
T ss_dssp SCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEECTT-----CHH
T ss_pred CCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEeCCC-----CHH
Confidence 888875 57899998 663 2344799999999999999754 2333333 35 778888744 899
Q ss_pred HHHHHHHHHhc-CCcH-HHHHHHHHHHH
Q 048393 333 AIAHCINEILE-GERG-KEIKQNADKWR 358 (369)
Q Consensus 333 ~l~~~i~~~l~-~~~~-~~~~~~a~~l~ 358 (369)
++.++|.++++ +++. ..+.+++++..
T Consensus 384 ~la~~i~~ll~~~~~~~~~~~~~~~~~~ 411 (439)
T 3fro_A 384 ELANAILKALELSRSDLSKFRENCKKRA 411 (439)
T ss_dssp HHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 99999999998 7653 67777776654
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.15 E-value=9.4e-06 Score=75.04 Aligned_cols=156 Identities=15% Similarity=0.179 Sum_probs=99.0
Q ss_pred HHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCC------CcEEEEEeCCccCCCCcchhcc--cCCCcEEEe
Q 048393 189 SCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASD------KYFLWVVRESEQSKLPENFSDE--TSQKGLVVN 260 (369)
Q Consensus 189 ~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~------~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 260 (369)
.+.+-+... ++..+++..|+.... ..+..+++++.... .. ++.+|......+. ....+ ..+++.+.+
T Consensus 185 ~~~~~~~~~-~~~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~~-l~i~G~g~~~~~~-~~~~~~~~~~~v~~~g 259 (374)
T 2iw1_A 185 IYRQKNGIK-EQQNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTL-LFVVGQDKPRKFE-ALAEKLGVRSNVHFFS 259 (374)
T ss_dssp HHHHHTTCC-TTCEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEE-EEEESSSCCHHHH-HHHHHHTCGGGEEEES
T ss_pred HHHHHhCCC-CCCeEEEEeccchhh--cCHHHHHHHHHHhHhccCCceE-EEEEcCCCHHHHH-HHHHHcCCCCcEEECC
Confidence 344444332 344677777876532 23455566665542 33 3444543211111 11111 235788888
Q ss_pred ccChH-HhhcccCcCceee----cCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHH
Q 048393 261 WCPQL-GVLAHEATGCFLT----HCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIA 335 (369)
Q Consensus 261 ~~p~~-~iL~~~~~~~~I~----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~ 335 (369)
+..+. ++++.+++ +|. -|..+++.||+++|+|+|+.+.. .+...+++. +.|+.+... -+.+++.
T Consensus 260 ~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~~----~~~~~l~ 328 (374)
T 2iw1_A 260 GRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADA-NCGTVIAEP----FSQEQLN 328 (374)
T ss_dssp CCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHH-TCEEEECSS----CCHHHHH
T ss_pred CcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccC-CceEEeCCC----CCHHHHH
Confidence 86654 79999998 775 56678999999999999997653 345677777 889988721 3899999
Q ss_pred HHHHHHhcCCcH-HHHHHHHHHHHHH
Q 048393 336 HCINEILEGERG-KEIKQNADKWRNF 360 (369)
Q Consensus 336 ~~i~~~l~~~~~-~~~~~~a~~l~~~ 360 (369)
++|.++++|++- ..+.+++++..+.
T Consensus 329 ~~i~~l~~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 329 EVLRKALTQSPLRMAWAENARHYADT 354 (374)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 999999998743 5566666665543
No 38
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.10 E-value=4.8e-05 Score=63.74 Aligned_cols=91 Identities=18% Similarity=0.127 Sum_probs=67.2
Q ss_pred CcEE-EeccChH---HhhcccCcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCC
Q 048393 255 KGLV-VNWCPQL---GVLAHEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEK 326 (369)
Q Consensus 255 ~~~~-~~~~p~~---~iL~~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 326 (369)
++.+ .+++++. .+++.+++ +|.- |...++.||+++|+|+|+... ......+ .. +.|+.++..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~~-- 165 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKAG-- 165 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECTT--
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecCC--
Confidence 7888 8999843 78899998 6643 224689999999999998754 3455555 55 778888743
Q ss_pred CCcCHHHHHHHHHHHhc-CCcH-HHHHHHHHHHH
Q 048393 327 GIVRREAIAHCINEILE-GERG-KEIKQNADKWR 358 (369)
Q Consensus 327 ~~~~~~~l~~~i~~~l~-~~~~-~~~~~~a~~l~ 358 (369)
+.+++.++|.++++ |++. ..+.+++++..
T Consensus 166 ---~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~ 196 (200)
T 2bfw_A 166 ---DPGELANAILKALELSRSDLSKFRENCKKRA 196 (200)
T ss_dssp ---CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 89999999999999 8743 44555555443
No 39
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.06 E-value=1.2e-05 Score=65.39 Aligned_cols=142 Identities=13% Similarity=0.170 Sum_probs=81.8
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhC----CCcEEEEEeCCcc-CCCCcchhcccCCCcEEEeccChH---HhhcccC
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKAS----DKYFLWVVRESEQ-SKLPENFSDETSQKGLVVNWCPQL---GVLAHEA 272 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~----~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~ 272 (369)
+++++..|+.... ..+..+++++... +..++ .+|.... ..+. ....+...++.+ +|+|+. .+++.++
T Consensus 2 ~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~-i~G~g~~~~~~~-~~~~~~~~~v~~-g~~~~~~~~~~~~~ad 76 (166)
T 3qhp_A 2 PFKIAMVGRYSNE--KNQSVLIKAVALSKYKQDIVLL-LKGKGPDEKKIK-LLAQKLGVKAEF-GFVNSNELLEILKTCT 76 (166)
T ss_dssp CEEEEEESCCSTT--TTHHHHHHHHHTCTTGGGEEEE-EECCSTTHHHHH-HHHHHHTCEEEC-CCCCHHHHHHHHTTCS
T ss_pred ceEEEEEeccchh--cCHHHHHHHHHHhccCCCeEEE-EEeCCccHHHHH-HHHHHcCCeEEE-eecCHHHHHHHHHhCC
Confidence 4677888887532 2345555665543 23333 3343211 1111 111222235667 898865 6889999
Q ss_pred cCceee----cCChhhHHHHHhhCC-ceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcH
Q 048393 273 TGCFLT----HCGWNSTMEALGLGV-PMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERG 347 (369)
Q Consensus 273 ~~~~I~----hgG~~s~~eal~~Gv-P~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~ 347 (369)
+ +|. -|...++.||+++|+ |+|+-...+. ....+.+. +. .+.. -+.+++.++|.++++|++.
T Consensus 77 v--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~~~~-~~--~~~~-----~~~~~l~~~i~~l~~~~~~ 143 (166)
T 3qhp_A 77 L--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFALDE-RS--LFEP-----NNAKDLSAKIDWWLENKLE 143 (166)
T ss_dssp E--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGCSSG-GG--EECT-----TCHHHHHHHHHHHHHCHHH
T ss_pred E--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhccCC-ce--EEcC-----CCHHHHHHHHHHHHhCHHH
Confidence 8 664 344579999999996 9999332111 11111222 22 3442 3899999999999998743
Q ss_pred -HHHHHHHHHHHHH
Q 048393 348 -KEIKQNADKWRNF 360 (369)
Q Consensus 348 -~~~~~~a~~l~~~ 360 (369)
..+.+++++..+.
T Consensus 144 ~~~~~~~~~~~~~~ 157 (166)
T 3qhp_A 144 RERMQNEYAKSALN 157 (166)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 5566666665543
No 40
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.72 E-value=0.00028 Score=69.02 Aligned_cols=145 Identities=10% Similarity=0.026 Sum_probs=93.8
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEE--eCCc-c-CCCCcchh-cccCCCcEEEeccChHH---hhcccC
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVV--RESE-Q-SKLPENFS-DETSQKGLVVNWCPQLG---VLAHEA 272 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~--~~~~-~-~~~~~~~~-~~~~~~~~~~~~~p~~~---iL~~~~ 272 (369)
.++|.++.+.....+..++...+.+++.+..++|.. +... . ..+...+. ....+++.+.+.+|..+ .+..+|
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aD 520 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCD 520 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCS
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCc
Confidence 588999998888888889988888988888888754 3211 0 00000110 11224677788888665 447777
Q ss_pred cCceee---cCChhhHHHHHhhCCceeecCCCCCh-hHHHHHHHhhcCceEE-ecCCCCCCcCHHHHHHHHHHHhcCCcH
Q 048393 273 TGCFLT---HCGWNSTMEALGLGVPMLAMPQWSDQ-STNAKYIMDVGKMGLK-VPADEKGIVRREAIAHCINEILEGERG 347 (369)
Q Consensus 273 ~~~~I~---hgG~~s~~eal~~GvP~i~~P~~~dQ-~~na~~~~~~~g~g~~-~~~~~~~~~~~~~l~~~i~~~l~~~~~ 347 (369)
+ |+. .+|..|++||+++|||+|.++-..=. ..-+..+... |+.-. +- -+.++..+...++.+|++.
T Consensus 521 I--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LIA------~d~eeYv~~Av~La~D~~~ 591 (631)
T 3q3e_A 521 M--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLIA------NTVDEYVERAVRLAENHQE 591 (631)
T ss_dssp E--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGEE------SSHHHHHHHHHHHHHCHHH
T ss_pred E--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCcceec------CCHHHHHHHHHHHhCCHHH
Confidence 7 664 37889999999999999999854322 2223334445 66542 32 2677777777788888743
Q ss_pred -HHHHHHH
Q 048393 348 -KEIKQNA 354 (369)
Q Consensus 348 -~~~~~~a 354 (369)
..+++++
T Consensus 592 l~~LR~~L 599 (631)
T 3q3e_A 592 RLELRRYI 599 (631)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 4444444
No 41
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.64 E-value=0.00012 Score=68.17 Aligned_cols=100 Identities=12% Similarity=0.206 Sum_probs=73.9
Q ss_pred CcEEEeccChH-HhhcccCcCceee---c--CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCC
Q 048393 255 KGLVVNWCPQL-GVLAHEATGCFLT---H--CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGI 328 (369)
Q Consensus 255 ~~~~~~~~p~~-~iL~~~~~~~~I~---h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 328 (369)
++.+.++..+. .+++.+|+ ++. . +|..+++||+++|+|+|+-|..++.......+.+. |.++.+.
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------
Confidence 45555655544 78999998 654 1 34578999999999999877777666666666566 7666542
Q ss_pred cCHHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHH
Q 048393 329 VRREAIAHCINEILEGERG-KEIKQNADKWRNFAKEAV 365 (369)
Q Consensus 329 ~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~~~~~~~~ 365 (369)
+.++|.++|.++++| +. +.|.+++++..+.-..+.
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ga~ 367 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKGCYLEKL 367 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcccHH
Confidence 679999999999988 53 678888888777665554
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.63 E-value=0.00039 Score=68.14 Aligned_cols=95 Identities=14% Similarity=0.117 Sum_probs=67.4
Q ss_pred CCcEEEeccChH---HhhcccCcCceee---cCChhhHHHHHhhCCceeecCCCCC-hhHHHHHHHhhcCceEEecCCCC
Q 048393 254 QKGLVVNWCPQL---GVLAHEATGCFLT---HCGWNSTMEALGLGVPMLAMPQWSD-QSTNAKYIMDVGKMGLKVPADEK 326 (369)
Q Consensus 254 ~~~~~~~~~p~~---~iL~~~~~~~~I~---hgG~~s~~eal~~GvP~i~~P~~~d-Q~~na~~~~~~~g~g~~~~~~~~ 326 (369)
+++.+.+++|+. .+++.+|+ ||. .|+.++++||+++|+|+|++|-..- -..-+..+... |+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhc----
Confidence 568899999844 67899998 762 3667899999999999999875321 11224556666 7665553
Q ss_pred CCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHH
Q 048393 327 GIVRREAIAHCINEILEGERG-KEIKQNADKW 357 (369)
Q Consensus 327 ~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l 357 (369)
. +.+.+.+++.++++|++. ..+++++++.
T Consensus 507 -~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~ 536 (568)
T 2vsy_A 507 -A-DDAAFVAKAVALASDPAALTALHARVDVL 536 (568)
T ss_dssp -S-SHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred -C-CHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 2 789999999999998743 4555555443
No 43
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.63 E-value=0.00093 Score=62.63 Aligned_cols=92 Identities=15% Similarity=0.074 Sum_probs=68.2
Q ss_pred CCCcEEEeccC-----hH-HhhcccCcCceeecC----ChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEec
Q 048393 253 SQKGLVVNWCP-----QL-GVLAHEATGCFLTHC----GWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVP 322 (369)
Q Consensus 253 ~~~~~~~~~~p-----~~-~iL~~~~~~~~I~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~ 322 (369)
.+++.+.+|++ +. ++++.+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+++. +.|+.++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 36788988776 22 68899998 77544 45789999999999999764 3566666666 7788774
Q ss_pred CCCCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Q 048393 323 ADEKGIVRREAIAHCINEILEGERG-KEIKQNADKWR 358 (369)
Q Consensus 323 ~~~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~ 358 (369)
+.+++.++|.++++|++. ..+.+++++..
T Consensus 365 -------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHPEVSKEMGAKAKERV 394 (416)
T ss_dssp -------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 678999999999998743 45555555443
No 44
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.61 E-value=0.0011 Score=67.46 Aligned_cols=93 Identities=15% Similarity=0.165 Sum_probs=62.7
Q ss_pred CCcEEEec----cChHHhh---c-ccCcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEe
Q 048393 254 QKGLVVNW----CPQLGVL---A-HEATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKV 321 (369)
Q Consensus 254 ~~~~~~~~----~p~~~iL---~-~~~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~ 321 (369)
+++.+.++ +|+.++. + .+++ ||.- |-..++.||+++|+|+|+-. .......+.+- ..|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg-~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHG-KSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBT-TTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccC-CcEEEe
Confidence 56777774 4444443 3 4566 6632 34579999999999999963 34455556556 679888
Q ss_pred cCCCCCCcCHHHHHHHHHHHh----cCCcH-HHHHHHHHHHH
Q 048393 322 PADEKGIVRREAIAHCINEIL----EGERG-KEIKQNADKWR 358 (369)
Q Consensus 322 ~~~~~~~~~~~~l~~~i~~~l----~~~~~-~~~~~~a~~l~ 358 (369)
+.. +.+.+.++|.+++ .|++. ..+.+++++..
T Consensus 713 ~p~-----D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 713 DPY-----HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp CTT-----SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred CCC-----CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 854 7899999997766 77743 55555555543
No 45
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.58 E-value=0.0012 Score=66.72 Aligned_cols=146 Identities=16% Similarity=0.203 Sum_probs=97.8
Q ss_pred CCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhc---c---cCCCcEEEeccChHH---hh
Q 048393 198 ANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSD---E---TSQKGLVVNWCPQLG---VL 268 (369)
Q Consensus 198 ~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~p~~~---iL 268 (369)
+++.++|.+|-+....+++.+..-.+.|++.+-.++|........ ..++.. + ..+++.+.+..|..+ .+
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~--~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG--EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG--HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH--HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 456699999999999999999999999999999999998754211 111111 0 124677778887664 44
Q ss_pred cccCcCceee---cCChhhHHHHHhhCCceeecCCCC-ChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 269 AHEATGCFLT---HCGWNSTMEALGLGVPMLAMPQWS-DQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 269 ~~~~~~~~I~---hgG~~s~~eal~~GvP~i~~P~~~-dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
..+|+ ++. .+|..|++|||+.|||+|.+|-.. -...-+-.+... |+.-.+- -+.++-.+...++-+|
T Consensus 598 ~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~ia------~~~~~Y~~~a~~la~d 668 (723)
T 4gyw_A 598 QLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELIA------KNRQEYEDIAVKLGTD 668 (723)
T ss_dssp GGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGBC------SSHHHHHHHHHHHHHC
T ss_pred CCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCccccc------CCHHHHHHHHHHHhcC
Confidence 56666 876 899999999999999999999432 223334455555 7765543 2455544444466677
Q ss_pred CcH-HHHHHHH
Q 048393 345 ERG-KEIKQNA 354 (369)
Q Consensus 345 ~~~-~~~~~~a 354 (369)
.+. ..+|+++
T Consensus 669 ~~~l~~lr~~l 679 (723)
T 4gyw_A 669 LEYLKKVRGKV 679 (723)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 633 3444443
No 46
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.56 E-value=0.00017 Score=65.77 Aligned_cols=124 Identities=11% Similarity=0.086 Sum_probs=81.9
Q ss_pred EEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCcc-CCCCcchhcccCCCcEEEeccChH---HhhcccCcCcee-
Q 048393 203 VYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQ-SKLPENFSDETSQKGLVVNWCPQL---GVLAHEATGCFL- 277 (369)
Q Consensus 203 i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~~~~~I- 277 (369)
+++..|+... ...+..+++++...+.++++. |.... ..+ .....+..+++.+.+|+++. ++++.+++ +|
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~-G~g~~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~v~ 237 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLA-GPAWEPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA--VLA 237 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEE-SCCCCHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--EEE
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEE-eCcccHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--EEE
Confidence 4555677652 223555666666667776554 44321 111 11222334788999999875 78999999 66
Q ss_pred -ec------------CChhhHHHHHhhCCceeecCCCCChhHHHHHHHh--hcCceEEecCCCCCCcCHHHHHHHHHHHh
Q 048393 278 -TH------------CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMD--VGKMGLKVPADEKGIVRREAIAHCINEIL 342 (369)
Q Consensus 278 -~h------------gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~--~~g~g~~~~~~~~~~~~~~~l~~~i~~~l 342 (369)
++ |-.+++.||+++|+|+|+... ....+.+++ - ..|+.++ . +.+++.++|.+++
T Consensus 238 ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~-----~-d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 238 MSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTD-----F-APDEARRTLAGLP 306 (342)
T ss_dssp CCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSC-----C-CHHHHHHHHHTSC
T ss_pred CCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcC-----C-CHHHHHHHHHHHH
Confidence 32 334689999999999999875 346666666 4 5676665 6 8899999999988
Q ss_pred c
Q 048393 343 E 343 (369)
Q Consensus 343 ~ 343 (369)
+
T Consensus 307 ~ 307 (342)
T 2iuy_A 307 A 307 (342)
T ss_dssp C
T ss_pred H
Confidence 7
No 47
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.51 E-value=0.00029 Score=67.91 Aligned_cols=94 Identities=19% Similarity=0.173 Sum_probs=69.0
Q ss_pred CCCcEEEeccChH---Hhhccc----CcCceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEe
Q 048393 253 SQKGLVVNWCPQL---GVLAHE----ATGCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKV 321 (369)
Q Consensus 253 ~~~~~~~~~~p~~---~iL~~~----~~~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~ 321 (369)
.+++.+.+++|+. .+++.+ ++ +|.- |-..++.||+++|+|+|+... ......+.+. ..|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 4678999999755 688899 88 6632 334689999999999998753 3455556555 678888
Q ss_pred cCCCCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Q 048393 322 PADEKGIVRREAIAHCINEILEGERG-KEIKQNADKWR 358 (369)
Q Consensus 322 ~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l~ 358 (369)
+.. +.+++.++|.++++|++. ..+.+++++..
T Consensus 407 ~~~-----d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 439 (499)
T 2r60_A 407 DPE-----DPEDIARGLLKAFESEETWSAYQEKGKQRV 439 (499)
T ss_dssp CTT-----CHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCC-----CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 743 889999999999998742 44555554433
No 48
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.48 E-value=0.011 Score=55.48 Aligned_cols=116 Identities=12% Similarity=0.048 Sum_probs=75.8
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH---HhhcccCcCceee
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL---GVLAHEATGCFLT 278 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~~~~~I~ 278 (369)
.+++..|+... ....+..+.+. ..+.++++ +|.+....+ ...+++.+.+++|+. ++++.+++ +|.
T Consensus 223 ~~i~~vGrl~~-~Kg~~~~l~~~--~~~~~l~i-vG~g~~~~~------~l~~~V~f~G~~~~~~l~~~~~~adv--~v~ 290 (406)
T 2hy7_A 223 IHAVAVGSMLF-DPEFFVVASKA--FPQVTFHV-IGSGMGRHP------GYGDNVIVYGEMKHAQTIGYIKHARF--GIA 290 (406)
T ss_dssp EEEEEECCTTB-CHHHHHHHHHH--CTTEEEEE-ESCSSCCCT------TCCTTEEEECCCCHHHHHHHHHTCSE--EEC
T ss_pred cEEEEEecccc-ccCHHHHHHHh--CCCeEEEE-EeCchHHhc------CCCCCEEEcCCCCHHHHHHHHHhcCE--EEE
Confidence 67777888864 33333332221 23444443 454321110 124678999999865 57899998 653
Q ss_pred ---c-CChhhHHHHH-------hhCCceeecCCCCChhHHHHHHHhhcCceEE-ecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 279 ---H-CGWNSTMEAL-------GLGVPMLAMPQWSDQSTNAKYIMDVGKMGLK-VPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 279 ---h-gG~~s~~eal-------~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~-~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+ |-.+++.||+ ++|+|+|+-.. +.+- ..|.. +..+ +.++|.++|.++++|+
T Consensus 291 ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~~~-----d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 291 PYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYTPG-----NADSVIAAITQALEAP 353 (406)
T ss_dssp CBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEECTT-----CHHHHHHHHHHHHHCC
T ss_pred CCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeCCC-----CHHHHHHHHHHHHhCc
Confidence 2 3346789999 99999998754 4444 56877 7644 8999999999999876
No 49
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.32 E-value=0.0011 Score=61.93 Aligned_cols=89 Identities=10% Similarity=0.109 Sum_probs=60.3
Q ss_pred cEEEeccChH---HhhcccCcCceee----cCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCc-----------
Q 048393 256 GLVVNWCPQL---GVLAHEATGCFLT----HCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKM----------- 317 (369)
Q Consensus 256 ~~~~~~~p~~---~iL~~~~~~~~I~----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~----------- 317 (369)
+.+.+|+|+. ++++.+++ +|. -|...++.||+++|+|+|+... ......+.+. ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGD-CVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTT-TSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccC-ccccccccccccc
Confidence 5566899844 68899998 663 2344689999999999998653 3344444333 22
Q ss_pred ----eE--EecCCCCCCcCHHHHHHHHHHHhcCCcH-HHHHHHHHHH
Q 048393 318 ----GL--KVPADEKGIVRREAIAHCINEILEGERG-KEIKQNADKW 357 (369)
Q Consensus 318 ----g~--~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~~~~a~~l 357 (369)
|+ .+.. -+.+++.++| ++++|++. ..+.+++++.
T Consensus 329 ~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~~ 369 (413)
T 3oy2_A 329 DDRDGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQDF 369 (413)
T ss_dssp TTTCSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHHH
T ss_pred ccccCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHHH
Confidence 55 5553 3899999999 99998743 4454454443
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.02 E-value=0.00098 Score=61.01 Aligned_cols=133 Identities=13% Similarity=0.086 Sum_probs=87.8
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHh---hcccCcCcee
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGV---LAHEATGCFL 277 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i---L~~~~~~~~I 277 (369)
..+++..|+++.. +.+ ..+ ..+..+ +.+|.+... +.+ |+.+.+|+|+.++ |+.++.+++.
T Consensus 178 ~~~i~yaG~l~k~--~~L----~~l-~~~~~f-~ivG~G~~~--------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~ 240 (339)
T 3rhz_A 178 KREIHFPGNPERF--SFV----KEW-KYDIPL-KVYTWQNVE--------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVW 240 (339)
T ss_dssp EEEEEECSCTTTC--GGG----GGC-CCSSCE-EEEESCCCC--------CCT-TEEEEECCCHHHHHHHHHTEEEEECC
T ss_pred CcEEEEeCCcchh--hHH----HhC-CCCCeE-EEEeCCccc--------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEE
Confidence 3667888988731 111 111 234554 445654322 123 7899999998754 5555554444
Q ss_pred ecCC---------hhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHH
Q 048393 278 THCG---------WNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGK 348 (369)
Q Consensus 278 ~hgG---------~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~ 348 (369)
.-+. .+-+.|++++|+|+|+.+ ...++..+++. ++|+.++ +.+++.+++.++.. ++.+
T Consensus 241 ~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~-------~~~e~~~~i~~l~~-~~~~ 307 (339)
T 3rhz_A 241 MDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK-------DVEEAIMKVKNVNE-DEYI 307 (339)
T ss_dssp CCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES-------SHHHHHHHHHHCCH-HHHH
T ss_pred CCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC-------CHHHHHHHHHHhCH-HHHH
Confidence 2222 245889999999999865 45677888999 9999886 46788888887643 3346
Q ss_pred HHHHHHHHHHHHHHH
Q 048393 349 EIKQNADKWRNFAKE 363 (369)
Q Consensus 349 ~~~~~a~~l~~~~~~ 363 (369)
.|++|+++.++++++
T Consensus 308 ~m~~na~~~a~~~~~ 322 (339)
T 3rhz_A 308 ELVKNVRSFNPILRK 322 (339)
T ss_dssp HHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHhhc
Confidence 899999988877663
No 51
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.01 E-value=0.0049 Score=58.92 Aligned_cols=140 Identities=9% Similarity=0.093 Sum_probs=81.7
Q ss_pred ceEEEEeCcccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCc---cCCCCcchhcccCCCcE-EEeccChH--HhhcccCc
Q 048393 201 SVVYVSFGSMAT-LKMEQMEELAWGLKASDKYFLWVVRESE---QSKLPENFSDETSQKGL-VVNWCPQL--GVLAHEAT 273 (369)
Q Consensus 201 ~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~p~~--~iL~~~~~ 273 (369)
..+++..|+... .....+-+.+..+.+.+..+++. |... ...+. ....+..+++. +.++.... .+++.+++
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~~~~~~~l~-~~~~~~~~~v~~~~g~~~~~~~~~~~~adv 368 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGDVALEGALL-AAASRHHGRVGVAIGYNEPLSHLMQAGCDA 368 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBCHHHHHHHH-HHHHHTTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCchHHHHHHH-HHHHhCCCcEEEecCCCHHHHHHHHhcCCE
Confidence 357778888864 23333333333343346665544 4431 01111 11122345776 56773332 68999998
Q ss_pred Cceee----cCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhc---------CceEEecCCCCCCcCHHHHHHHHHH
Q 048393 274 GCFLT----HCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVG---------KMGLKVPADEKGIVRREAIAHCINE 340 (369)
Q Consensus 274 ~~~I~----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~---------g~g~~~~~~~~~~~~~~~l~~~i~~ 340 (369)
||. -|-..+++||+++|+|+|+... ....+.+. .. +.|+.++. -+.+++.++|.+
T Consensus 369 --~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~-----~d~~~la~~i~~ 436 (485)
T 1rzu_A 369 --IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVI-DANHAALASKAATGVQFSP-----VTLDGLKQAIRR 436 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEESS-----CSHHHHHHHHHH
T ss_pred --EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheec-ccccccccccCCcceEeCC-----CCHHHHHHHHHH
Confidence 763 2445789999999999999754 23333332 20 26788774 388999999999
Q ss_pred Hh---cCCcH-HHHHHHH
Q 048393 341 IL---EGERG-KEIKQNA 354 (369)
Q Consensus 341 ~l---~~~~~-~~~~~~a 354 (369)
++ +|++. ..+.+++
T Consensus 437 ll~~~~~~~~~~~~~~~~ 454 (485)
T 1rzu_A 437 TVRYYHDPKLWTQMQKLG 454 (485)
T ss_dssp HHHHHTCHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHH
Confidence 99 67632 3444443
No 52
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.82 E-value=0.0052 Score=58.78 Aligned_cols=143 Identities=10% Similarity=0.057 Sum_probs=81.0
Q ss_pred CceEEEEeCcccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCc--cCCCCcchhcccCCCcE-EEeccChH--HhhcccCc
Q 048393 200 GSVVYVSFGSMAT-LKMEQMEELAWGLKASDKYFLWVVRESE--QSKLPENFSDETSQKGL-VVNWCPQL--GVLAHEAT 273 (369)
Q Consensus 200 ~~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~p~~--~iL~~~~~ 273 (369)
+..+++..|+... .....+-+.+..+.+.+..+++.-.... ...+. ....+..+++. +.++.... .+++.+++
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~-~~~~~~~~~v~~~~g~~~~~~~~~~~~adv 369 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFL-AAAAEYPGQVGVQIGYHEAFSHRIMGGADV 369 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHH-HHHHHSTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHH-HHHHhCCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 3456667777653 2333333333334334666555433210 11111 11122335675 66773332 68999998
Q ss_pred Cceeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhh--------cCceEEecCCCCCCcCHHHHHHHHHHH
Q 048393 274 GCFLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDV--------GKMGLKVPADEKGIVRREAIAHCINEI 341 (369)
Q Consensus 274 ~~~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~--------~g~g~~~~~~~~~~~~~~~l~~~i~~~ 341 (369)
||.- |-.++++||+++|+|+|+... ......+.+. .+.|+.++.. +.+++.++|.++
T Consensus 370 --~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~-----d~~~la~~i~~l 438 (485)
T 2qzs_A 370 --ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFEDS-----NAWSLLRAIRRA 438 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECSS-----SHHHHHHHHHHH
T ss_pred --EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECCC-----CHHHHHHHHHHH
Confidence 6632 445789999999999998754 2333333321 0268887743 899999999999
Q ss_pred h---cCCcH-HHHHHHH
Q 048393 342 L---EGERG-KEIKQNA 354 (369)
Q Consensus 342 l---~~~~~-~~~~~~a 354 (369)
+ +|++. ..+.+++
T Consensus 439 l~~~~~~~~~~~~~~~~ 455 (485)
T 2qzs_A 439 FVLWSRPSLWRFVQRQA 455 (485)
T ss_dssp HHHHTSHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHH
Confidence 9 67632 3444443
No 53
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.13 E-value=0.0094 Score=56.01 Aligned_cols=79 Identities=10% Similarity=-0.026 Sum_probs=57.7
Q ss_pred CCcEEEeccChH---HhhcccCcCceee--c-CCh-hhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCC
Q 048393 254 QKGLVVNWCPQL---GVLAHEATGCFLT--H-CGW-NSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEK 326 (369)
Q Consensus 254 ~~~~~~~~~p~~---~iL~~~~~~~~I~--h-gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 326 (369)
+++.+.+++|+. ++++.+++ ||. + =|. .++.||+++|+|+|+ -..+ ....+++- ..|+.++..
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~~-- 364 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQL-- 364 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESSC--
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCCC--
Confidence 467888999865 68899999 664 2 133 578999999999998 3222 12334444 578888744
Q ss_pred CCcCHHHHHHHHHHHhcCC
Q 048393 327 GIVRREAIAHCINEILEGE 345 (369)
Q Consensus 327 ~~~~~~~l~~~i~~~l~~~ 345 (369)
+.+.|.++|.++++|+
T Consensus 365 ---d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 365 ---NPENIAETLVELCMSF 380 (413)
T ss_dssp ---SHHHHHHHHHHHHHHT
T ss_pred ---CHHHHHHHHHHHHcCH
Confidence 8999999999999887
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.24 E-value=0.17 Score=49.19 Aligned_cols=136 Identities=10% Similarity=0.062 Sum_probs=75.5
Q ss_pred ceEEEEeCcccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCcc-CCCCcchhcccCCCcEEEeccChH---HhhcccCcCc
Q 048393 201 SVVYVSFGSMAT-LKMEQMEELAWGLKASDKYFLWVVRESEQ-SKLPENFSDETSQKGLVVNWCPQL---GVLAHEATGC 275 (369)
Q Consensus 201 ~~i~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~---~iL~~~~~~~ 275 (369)
..+++..|.... .....+-+.+..+.+.+.++++...+... ...-.......+.++.+..+.+.. .+++.+++
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~-- 404 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV-- 404 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE--
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe--
Confidence 355666677753 23333333333344455666544322210 000011122345677777766654 57888988
Q ss_pred eeec----CChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCC-CC----CcCHHHHHHHHHHHhc
Q 048393 276 FLTH----CGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADE-KG----IVRREAIAHCINEILE 343 (369)
Q Consensus 276 ~I~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~-~~----~~~~~~l~~~i~~~l~ 343 (369)
||.= |=..+++||+++|+|+|+-.. .-....|.+- ..|....... .+ ..+.+.|.++|++++.
T Consensus 405 ~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 7643 223589999999999998653 3444555554 5566443221 00 2357789999988774
No 55
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=93.71 E-value=0.98 Score=36.67 Aligned_cols=134 Identities=13% Similarity=0.115 Sum_probs=72.1
Q ss_pred hhHHHHHhccCCCCceEEEEeCc-cccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH
Q 048393 187 IESCMKWLNDRANGSVVYVSFGS-MATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL 265 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs-~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 265 (369)
-.++-++|... ...+||.|. .+ ...+..++..+.+-.++-++.... ...+.... ....++..++.+
T Consensus 34 A~~lg~~La~~---g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~~-~~~~~~~~----~~~i~~~~~~~R 100 (176)
T 2iz6_A 34 ANELGKQIATH---GWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGPD-TSEISDAV----DIPIVTGLGSAR 100 (176)
T ss_dssp HHHHHHHHHHT---TCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------CCTTC----SEEEECCCCSSS
T ss_pred HHHHHHHHHHC---CCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCchh-hhhhccCC----ceeEEcCCHHHH
Confidence 45666677654 488888888 55 233444444455556665554321 11111110 112445666665
Q ss_pred -H-hhcccCcCceeecCChhhHHHH---HhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHH
Q 048393 266 -G-VLAHEATGCFLTHCGWNSTMEA---LGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINE 340 (369)
Q Consensus 266 -~-iL~~~~~~~~I~hgG~~s~~ea---l~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ 340 (369)
. +...++. .++--||.||+.|+ +.+++|++++|.+. .....+... ......-. -+.+++.+.+.+
T Consensus 101 k~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~-----~~~~e~~~~l~~ 170 (176)
T 2iz6_A 101 DNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVA-----ADVAGAIAAVKQ 170 (176)
T ss_dssp CCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEE-----SSHHHHHHHHHH
T ss_pred HHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEc-----CCHHHHHHHHHH
Confidence 3 3345554 45556888987776 56999999999843 112223222 22222221 267887777776
Q ss_pred Hhc
Q 048393 341 ILE 343 (369)
Q Consensus 341 ~l~ 343 (369)
.+.
T Consensus 171 ~~~ 173 (176)
T 2iz6_A 171 LLA 173 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 56
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=91.45 E-value=0.36 Score=43.99 Aligned_cols=95 Identities=14% Similarity=0.178 Sum_probs=59.0
Q ss_pred CCceEEEEeCccc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEE-Eec--cChH-Hhhccc
Q 048393 199 NGSVVYVSFGSMA---TLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLV-VNW--CPQL-GVLAHE 271 (369)
Q Consensus 199 ~~~~i~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~p~~-~iL~~~ 271 (369)
+++.|.+..||.. ..+.+.+.++++.|.+.+.++++ ++......+.+.+.+....+... .+- +.+. .+++++
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a 262 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRC 262 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTC
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhC
Confidence 4668989888864 45778888999888766888876 44432211111222222222222 222 2334 789999
Q ss_pred CcCceeec-CChhhHHHHHhhCCceeec
Q 048393 272 ATGCFLTH-CGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 272 ~~~~~I~h-gG~~s~~eal~~GvP~i~~ 298 (369)
++ +|+. .|..-+ |.+.|+|+|++
T Consensus 263 ~~--~i~~DsG~~Hl--Aaa~g~P~v~l 286 (349)
T 3tov_A 263 NL--LITNDSGPMHV--GISQGVPIVAL 286 (349)
T ss_dssp SE--EEEESSHHHHH--HHTTTCCEEEE
T ss_pred CE--EEECCCCHHHH--HHhcCCCEEEE
Confidence 99 9998 444433 77899999975
No 57
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=88.54 E-value=0.91 Score=40.85 Aligned_cols=96 Identities=13% Similarity=0.049 Sum_probs=58.1
Q ss_pred CCceEEEEeCc-c-c--cCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccC----CCcE-EEecc--ChH-H
Q 048393 199 NGSVVYVSFGS-M-A--TLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETS----QKGL-VVNWC--PQL-G 266 (369)
Q Consensus 199 ~~~~i~vs~Gs-~-~--~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~--p~~-~ 266 (369)
+++.|.+..|| . . ..+.+.+.++++.|.+.+.++++. +........+.+.+..+ .++. +.+.. .+. .
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~a 257 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVI 257 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHH
Confidence 45688888888 3 2 356778888998887778887764 43321111111111111 1222 22222 233 7
Q ss_pred hhcccCcCceeecCChhhHHHHHhhCCceeec
Q 048393 267 VLAHEATGCFLTHCGWNSTMEALGLGVPMLAM 298 (369)
Q Consensus 267 iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~ 298 (369)
+++++++ +|+.- .|.+.-|.+.|+|+|++
T Consensus 258 li~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 258 LIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 8999999 99973 34555588899999964
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=87.25 E-value=0.53 Score=42.16 Aligned_cols=135 Identities=15% Similarity=0.083 Sum_probs=77.5
Q ss_pred CCceEEEEeCccc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEec--cChH-HhhcccC
Q 048393 199 NGSVVYVSFGSMA---TLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNW--CPQL-GVLAHEA 272 (369)
Q Consensus 199 ~~~~i~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~-~iL~~~~ 272 (369)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.+++...+......+.+.+.+.. .++.+.+- +.+. .++++++
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~-~~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGF-AYVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTC-TTEEECCCCCHHHHHHHHHTCS
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhC-CcccccCCCCHHHHHHHHHhCC
Confidence 4568888888764 35778888888888766777765544321111111111111 12333332 2344 7999999
Q ss_pred cCceeec-CChhhHHHHHhhCCceeec--CCCCChhHHHHHHHhhcCce-EEecC--CCCCCcCHHHHHHHHHHHhcCC
Q 048393 273 TGCFLTH-CGWNSTMEALGLGVPMLAM--PQWSDQSTNAKYIMDVGKMG-LKVPA--DEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 273 ~~~~I~h-gG~~s~~eal~~GvP~i~~--P~~~dQ~~na~~~~~~~g~g-~~~~~--~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+ +|+. .|..-+ |.+.|+|+|++ |..... .. =. |-. ..+.. .-...++.+++.+++.+++++.
T Consensus 256 l--~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~~--~~----P~-~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~~ 323 (326)
T 2gt1_A 256 F--VVSVDTGLSHL--TAALDRPNITVYGPTDPGL--IG----GY-GKNQMVCRAPGNELSQLTANAVKQFIEENAEKA 323 (326)
T ss_dssp E--EEEESSHHHHH--HHHTTCCEEEEESSSCHHH--HC----CC-SSSEEEEECGGGCGGGCCHHHHHHHHHHTTTTC
T ss_pred E--EEecCCcHHHH--HHHcCCCEEEEECCCChhh--cC----CC-CCCceEecCCcccccCCCHHHHHHHHHHHHHHh
Confidence 9 9999 555444 55589999987 422111 10 01 211 12210 0001689999999999999764
No 59
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=86.04 E-value=0.99 Score=44.71 Aligned_cols=46 Identities=9% Similarity=-0.032 Sum_probs=33.1
Q ss_pred CCcEEE---eccCh---------HHhhcccCcCceeecC----ChhhHHHHHhhCCceeecCCC
Q 048393 254 QKGLVV---NWCPQ---------LGVLAHEATGCFLTHC----GWNSTMEALGLGVPMLAMPQW 301 (369)
Q Consensus 254 ~~~~~~---~~~p~---------~~iL~~~~~~~~I~hg----G~~s~~eal~~GvP~i~~P~~ 301 (369)
++|+++ .|++. .++++.+++ ||.-. -..+.+||+++|+|+|+--..
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 455543 57765 368999999 66432 336899999999999986553
No 60
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=77.53 E-value=8.7 Score=36.44 Aligned_cols=73 Identities=12% Similarity=0.055 Sum_probs=49.8
Q ss_pred EEeccChH---HhhcccCcCceee---cCCh-hhHHHHHhhCC-----ceeecCCCCChhHHHHHHHhhcCceEEecCCC
Q 048393 258 VVNWCPQL---GVLAHEATGCFLT---HCGW-NSTMEALGLGV-----PMLAMPQWSDQSTNAKYIMDVGKMGLKVPADE 325 (369)
Q Consensus 258 ~~~~~p~~---~iL~~~~~~~~I~---hgG~-~s~~eal~~Gv-----P~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 325 (369)
+.+++++. .+++.+|+ ||. +=|. .++.||+++|+ |+|+--..+- +..+ ..|+.++.
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~----~~~l----~~g~lv~p-- 403 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA----ANEL----TSALIVNP-- 403 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG----GGTC----TTSEEECT--
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC----HHHh----CCeEEECC--
Confidence 34677766 57888998 664 3355 48999999998 6766544321 1111 23677774
Q ss_pred CCCcCHHHHHHHHHHHhcCC
Q 048393 326 KGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 326 ~~~~~~~~l~~~i~~~l~~~ 345 (369)
.+.+.+.++|.++|+++
T Consensus 404 ---~d~~~lA~ai~~lL~~~ 420 (482)
T 1uqt_A 404 ---YDRDEVAAALDRALTMS 420 (482)
T ss_dssp ---TCHHHHHHHHHHHHTCC
T ss_pred ---CCHHHHHHHHHHHHcCC
Confidence 37899999999999864
No 61
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=70.29 E-value=29 Score=32.98 Aligned_cols=77 Identities=16% Similarity=0.010 Sum_probs=53.3
Q ss_pred CcEEEeccChH---HhhcccCcCceee---cCChh-hHHHHHhhC---CceeecCCCCChhHHHHHHHhhcCceEEecCC
Q 048393 255 KGLVVNWCPQL---GVLAHEATGCFLT---HCGWN-STMEALGLG---VPMLAMPQWSDQSTNAKYIMDVGKMGLKVPAD 324 (369)
Q Consensus 255 ~~~~~~~~p~~---~iL~~~~~~~~I~---hgG~~-s~~eal~~G---vP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~ 324 (369)
.+.+.+.+|+. .+++.+++ |+. +=|+| +..|++++| .|+|+--+.+ .+..+. ..|+.++..
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP~ 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNPF 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECTT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECCC
Confidence 46666777764 67788888 653 45777 568999996 6666554433 222221 247888854
Q ss_pred CCCCcCHHHHHHHHHHHhcCC
Q 048393 325 EKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 325 ~~~~~~~~~l~~~i~~~l~~~ 345 (369)
+.+.+.++|.++|+++
T Consensus 424 -----D~~~lA~AI~~aL~m~ 439 (496)
T 3t5t_A 424 -----DLVEQAEAISAALAAG 439 (496)
T ss_dssp -----BHHHHHHHHHHHHHCC
T ss_pred -----CHHHHHHHHHHHHcCC
Confidence 8999999999999875
No 62
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=66.61 E-value=48 Score=27.05 Aligned_cols=97 Identities=12% Similarity=0.093 Sum_probs=55.4
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEE--eccCh
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVV--NWCPQ 264 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~ 264 (369)
..++-++|... +..+|+.|..+ ...+..++..+.+-.++-++..... ...+ ....+. ..+++
T Consensus 47 A~~lg~~LA~~---G~~vVsGg~~G-----iM~aa~~gAl~~GG~~iGVlP~e~~---~~~~-----~~~~~~~~~~f~~ 110 (195)
T 1rcu_A 47 CLELGRTLAKK---GYLVFNGGRDG-----VMELVSQGVREAGGTVVGILPDEEA---GNPY-----LSVAVKTGLDFQM 110 (195)
T ss_dssp HHHHHHHHHHT---TCEEEECCSSH-----HHHHHHHHHHHTTCCEEEEESTTCC---CCTT-----CSEEEECCCCHHH
T ss_pred HHHHHHHHHHC---CCEEEeCCHHH-----HHHHHHHHHHHcCCcEEEEeCCccc---CCCC-----cceeeecCCCHHH
Confidence 56667777653 37777766554 3444455555555566656543211 0110 123333 24554
Q ss_pred H-H-hhcccCcCceeecCChhhHHHH---HhhCCceeecCC
Q 048393 265 L-G-VLAHEATGCFLTHCGWNSTMEA---LGLGVPMLAMPQ 300 (369)
Q Consensus 265 ~-~-iL~~~~~~~~I~hgG~~s~~ea---l~~GvP~i~~P~ 300 (369)
+ . +...++. .++--||.||+.|+ +.+++|+++++.
T Consensus 111 Rk~~m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 111 RSFVLLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 4 3 4445554 45667889988776 669999999973
No 63
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=65.77 E-value=43 Score=26.32 Aligned_cols=140 Identities=16% Similarity=0.160 Sum_probs=69.8
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhccc-CcCceeecC
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHE-ATGCFLTHC 280 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~-~~~~~I~hg 280 (369)
.|-|-+||.. +....++....++..+..+-..+-+. ...|+.. ..|.... .+. ..++||.=.
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--HR~p~~~----------~~~~~~a---~~~~~~~ViIa~A 66 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA--HKTAEHV----------VSMLKEY---EALDRPKLYITIA 66 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT--TTCHHHH----------HHHHHHH---HTSCSCEEEEEEC
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--cCCHHHH----------HHHHHHh---hhcCCCcEEEEEC
Confidence 4666667764 55677788888888887754333332 2233321 1111111 111 234488877
Q ss_pred ChhhHHHHH---hhCCceeecCCCCChh-HH-HHHHHhh-cCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHH
Q 048393 281 GWNSTMEAL---GLGVPMLAMPQWSDQS-TN-AKYIMDV-GKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNA 354 (369)
Q Consensus 281 G~~s~~eal---~~GvP~i~~P~~~dQ~-~n-a~~~~~~-~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a 354 (369)
|...-+-.+ ..-+|+|.+|...-.. -. ..-+.+. -|+.+.--.+ ..++.-+...|. -++|+ .++++.
T Consensus 67 G~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dLlS~vqmp~GvpVatv~~---~~nAa~lA~~Il-~~~d~---~l~~kl 139 (159)
T 3rg8_A 67 GRSNALSGFVDGFVKGATIACPPPSDSFAGADIYSSLRMPSGISPALVLE---PKNAALLAARIF-SLYDK---EIADSV 139 (159)
T ss_dssp CSSCCHHHHHHHHSSSCEEECCCCCCGGGGTHHHHHHCCCTTCCCEECCS---HHHHHHHHHHHH-TTTCH---HHHHHH
T ss_pred CchhhhHHHHHhccCCCEEEeeCCCCCCCCccHHHHHhCCCCCceEEecC---chHHHHHHHHHH-hCCCH---HHHHHH
Confidence 764333222 2568999999653211 11 1222221 0222221111 344444444332 23667 788888
Q ss_pred HHHHHHHHHHH
Q 048393 355 DKWRNFAKEAV 365 (369)
Q Consensus 355 ~~l~~~~~~~~ 365 (369)
+..++..++.+
T Consensus 140 ~~~r~~~~~~v 150 (159)
T 3rg8_A 140 KSYMESNAQKI 150 (159)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 87777776655
No 64
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=60.62 E-value=48 Score=27.51 Aligned_cols=102 Identities=14% Similarity=0.084 Sum_probs=55.0
Q ss_pred hhHHHHHhccCCCCceEEEEeCcc-ccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSM-ATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL 265 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 265 (369)
..++-++|... +..+|+.|.. + ...+..++..+.+-.++=++...... .....+.-....+...++.+
T Consensus 34 A~~lg~~LA~~---G~~vVsGGg~~G-----iM~aa~~gAl~~GG~tiGVlP~~~~~---~e~~~~~~~~~~~~~~f~~R 102 (215)
T 2a33_A 34 AVDLGNELVSR---NIDLVYGGGSIG-----LMGLVSQAVHDGGRHVIGIIPKTLMP---RELTGETVGEVRAVADMHQR 102 (215)
T ss_dssp HHHHHHHHHHT---TCEEEECCCSSH-----HHHHHHHHHHHTTCCEEEEEESSCC-----------CCEEEEESSHHHH
T ss_pred HHHHHHHHHHC---CCEEEECCChhh-----HhHHHHHHHHHcCCcEEEEcchHhcc---hhhccCCCCceeecCCHHHH
Confidence 34556666643 3777887764 4 33444455445555555555432111 11100000123455666766
Q ss_pred -Hhh-cccCcCceeecCChhhHHHHHh---------hCCceeecCC
Q 048393 266 -GVL-AHEATGCFLTHCGWNSTMEALG---------LGVPMLAMPQ 300 (369)
Q Consensus 266 -~iL-~~~~~~~~I~hgG~~s~~eal~---------~GvP~i~~P~ 300 (369)
.++ ..++. .++--||.||+-|... +++|++++-.
T Consensus 103 k~~~~~~sda-~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 103 KAEMAKHSDA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHHHHHTCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHHHHHhCCE-EEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 343 44443 5667899999988863 4899998764
No 65
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=59.85 E-value=25 Score=28.18 Aligned_cols=114 Identities=8% Similarity=0.054 Sum_probs=63.0
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEE---EeccChHHhhcccCcCce
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLV---VNWCPQLGVLAHEATGCF 276 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~iL~~~~~~~~ 276 (369)
+.+++.-.||+.... ...+++.|.+.+..+-.+........+.....+...+.++. ..|+++.++-..+|+ .+
T Consensus 6 k~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~aD~-~v 81 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNGRKFINGEILKQFCDNYYDEFEDPFLNHVDIANKHDK-II 81 (175)
T ss_dssp CEEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGGGGGSCHHHHHHHCSCEECTTTCTTCCHHHHHHTCSE-EE
T ss_pred CEEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCHHHHhhHHHHHHhcCCEEecCCCCccccccccchhCE-EE
Confidence 346777777776432 44566667766776665555443332322211222221111 134556666555664 45
Q ss_pred eecCChhhHHH-------------HHhhCCceeecCC-------CCChhHHHHHHHhhcCce
Q 048393 277 LTHCGWNSTME-------------ALGLGVPMLAMPQ-------WSDQSTNAKYIMDVGKMG 318 (369)
Q Consensus 277 I~hgG~~s~~e-------------al~~GvP~i~~P~-------~~dQ~~na~~~~~~~g~g 318 (369)
|.=|-+||+.. ++..++|+++.|- ..=...|...+.+. |+=
T Consensus 82 VaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~ 142 (175)
T 3qjg_A 82 ILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDY-GVS 142 (175)
T ss_dssp EEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHT-TCE
T ss_pred EeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHC-CCE
Confidence 66677776543 3667999999993 22234577777777 753
No 66
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=58.38 E-value=66 Score=25.34 Aligned_cols=144 Identities=13% Similarity=0.154 Sum_probs=71.9
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecC
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHC 280 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hg 280 (369)
+.|-|-+||.. +....++....++..+..+-..+-+. ...|+.. ..|.. =.....+++||.=.
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--HR~p~~~----------~~~~~---~a~~~g~~ViIa~A 66 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA--HRTPKMM----------VQFAS---EARERGINIIIAGA 66 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTSHHHH----------HHHHH---HTTTTTCCEEEEEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC--cCCHHHH----------HHHHH---HHHhCCCcEEEEEC
Confidence 35666677764 55677888888888887754333332 2233321 11110 01112233488776
Q ss_pred ChhhHHHH---HhhCCceeecCCCCCh---hHHHHHHHhhcCceE--E-ecCCCCCCcCHHHHHHHHHHHhcCCcHHHHH
Q 048393 281 GWNSTMEA---LGLGVPMLAMPQWSDQ---STNAKYIMDVGKMGL--K-VPADEKGIVRREAIAHCINEILEGERGKEIK 351 (369)
Q Consensus 281 G~~s~~ea---l~~GvP~i~~P~~~dQ---~~na~~~~~~~g~g~--~-~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 351 (369)
|...-+-. -..-+|+|.+|....- ..-..-+.+. --|+ . +..++.+..++.-+...|.. ++|+ .++
T Consensus 67 G~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqm-p~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~---~l~ 141 (163)
T 3ors_A 67 GGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQM-PGGIPVATTAIGAAGAKNAGILAARMLS-IQNP---SLV 141 (163)
T ss_dssp ESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHTC-CTTSCCEECCSTHHHHHHHHHHHHHHHH-TTCT---HHH
T ss_pred CchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhhC-CCCCceEEEEcCCcccHHHHHHHHHHHh-CCCH---HHH
Confidence 66432222 2256899999975431 1111222222 2232 1 11110002333334433322 3777 889
Q ss_pred HHHHHHHHHHHHHHh
Q 048393 352 QNADKWRNFAKEAVA 366 (369)
Q Consensus 352 ~~a~~l~~~~~~~~~ 366 (369)
++.+..++..++.+.
T Consensus 142 ~kl~~~r~~~~~~v~ 156 (163)
T 3ors_A 142 EKLNQYESSLIQKVE 156 (163)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 998888888877654
No 67
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=55.10 E-value=24 Score=29.44 Aligned_cols=101 Identities=12% Similarity=-0.013 Sum_probs=56.5
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCcc-CCCCcchhcccCCCcEEEeccChH
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQ-SKLPENFSDETSQKGLVVNWCPQL 265 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~ 265 (369)
..++-+++... +..+|+.|... ....+..++..+.+-.++=+...... ...+.+ .-.+..++..++.+
T Consensus 30 A~~lg~~LA~~---g~~lV~GGg~~----GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~----~~~~~~~~~~~~~R 98 (216)
T 1ydh_A 30 AIELGNELVKR---KIDLVYGGGSV----GLMGLISRRVYEGGLHVLGIIPKALMPIEISGE----TVGDVRVVADMHER 98 (216)
T ss_dssp HHHHHHHHHHT---TCEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSS----CCSEEEEESSHHHH
T ss_pred HHHHHHHHHHC---CCEEEECCCcc----cHhHHHHHHHHHcCCcEEEEechhcCccccccC----CCCcccccCCHHHH
Confidence 45666677654 37778887742 13445555555566566655442100 001110 00123455555555
Q ss_pred -H-hhcccCcCceeecCChhhHHHHH---------hhCCceeecC
Q 048393 266 -G-VLAHEATGCFLTHCGWNSTMEAL---------GLGVPMLAMP 299 (369)
Q Consensus 266 -~-iL~~~~~~~~I~hgG~~s~~eal---------~~GvP~i~~P 299 (369)
. +...++. .++--||.||+-|.. .+++|++++-
T Consensus 99 k~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~ 142 (216)
T 1ydh_A 99 KAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLN 142 (216)
T ss_dssp HHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEEC
T ss_pred HHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEec
Confidence 3 4445554 466788999998886 4799999886
No 68
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=54.77 E-value=46 Score=33.80 Aligned_cols=79 Identities=9% Similarity=0.037 Sum_probs=50.7
Q ss_pred eeecCChhhHHHHHhhC-C--c--eeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHH
Q 048393 276 FLTHCGWNSTMEALGLG-V--P--MLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEI 350 (369)
Q Consensus 276 ~I~hgG~~s~~eal~~G-v--P--~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 350 (369)
|+.||-.+.+.|.++-. - | ++++|-+++--.-...++.. .++++.|.+++.+++....+..+
T Consensus 727 ~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~-------------gld~~~Iv~~a~~~l~~~~~~~~ 793 (845)
T 3ahc_A 727 FAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVN-------------DMDRYALQAAALKLIDADKYADK 793 (845)
T ss_dssp EEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTT-------------TCSHHHHHHHHHHHHHTTTTHHH
T ss_pred eeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHHh-------------CcCHHHHHHHHHHHcchhhHHHH
Confidence 55787777788877765 3 3 44555544333334444444 58999999999988874444567
Q ss_pred HHHHHHHHHHHHHHHhc
Q 048393 351 KQNADKWRNFAKEAVAK 367 (369)
Q Consensus 351 ~~~a~~l~~~~~~~~~~ 367 (369)
++.++....+.++.+.+
T Consensus 794 ~~~~~~~~~~~~~~~~~ 810 (845)
T 3ahc_A 794 IDELNAFRKKAFQFAVD 810 (845)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77776666666665544
No 69
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=54.33 E-value=56 Score=27.15 Aligned_cols=100 Identities=13% Similarity=0.098 Sum_probs=54.5
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChH-
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQL- 265 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~- 265 (369)
..++-+++... +..+|+.|..+ ...+..++..+.+-.++-+.........+..+. .....+...+..
T Consensus 58 A~~lg~~La~~---g~~lVsGGg~G-----iM~aa~~gAl~~gG~~iGV~~~~P~~~~~~~~~----t~~~~~~~f~~Rk 125 (217)
T 1wek_A 58 GYRLGRALAEA---GFGVVTGGGPG-----VMEAVNRGAYEAGGVSVGLNIELPHEQKPNPYQ----THALSLRYFFVRK 125 (217)
T ss_dssp HHHHHHHHHHH---TCEEEECSCSH-----HHHHHHHHHHHTTCCEEEEEECCTTCCCCCSCC----SEEEEESCHHHHH
T ss_pred HHHHHHHHHHC---CCEEEeCChhh-----HHHHHHHHHHHcCCCEEEEeeCCcchhhccccC----CcCcccCCHHHHH
Confidence 45666677643 38889888853 344455555555545554422110011111110 112344666666
Q ss_pred Hhh-cccCcCceeecCChhhHHHHHh----------hCCceeecC
Q 048393 266 GVL-AHEATGCFLTHCGWNSTMEALG----------LGVPMLAMP 299 (369)
Q Consensus 266 ~iL-~~~~~~~~I~hgG~~s~~eal~----------~GvP~i~~P 299 (369)
.++ ..++ ..++--||.||+.|... +++|++.+-
T Consensus 126 ~~m~~~sd-a~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 126 VLFVRYAV-GFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp HHHHHTEE-EEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred HHHHHhCC-EEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 333 4444 34566789999988743 479999885
No 70
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=53.80 E-value=9.7 Score=28.58 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=23.0
Q ss_pred HHHhcCCCCEEEECCCcc--hHHHHHHHh---CCCcEEE
Q 048393 28 LVERMNDVDCIVYDSFLP--WALDVAKKF---GLTGAAF 61 (369)
Q Consensus 28 ll~~~~~~D~vI~D~~~~--~~~~~A~~l---giP~v~~ 61 (369)
++++. +||+||.|..++ -|..+++.+ ++|++.+
T Consensus 48 ~~~~~-~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 48 IARKG-QFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHC-CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHhC-CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 44455 899999999983 356666555 7886654
No 71
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=53.77 E-value=9.9 Score=32.66 Aligned_cols=54 Identities=13% Similarity=0.236 Sum_probs=38.3
Q ss_pred ccCcCceeecCChhhHHHHHhh---CCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 270 HEATGCFLTHCGWNSTMEALGL---GVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 270 ~~~~~~~I~hgG~~s~~eal~~---GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
.+++ +|+=||=||+.+++.. ++|+++++. +. . |..- .+.++++.++++.+++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~-G~----------~---Gfl~------~~~~~~~~~al~~i~~g~ 97 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA-GR----------L---GFLT------SYTLDEIDRFLEDLRNWN 97 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES-SS----------C---CSSC------CBCGGGHHHHHHHHHTTC
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC-CC----------C---CccC------cCCHHHHHHHHHHHHcCC
Confidence 4566 9999999999999876 889998873 20 1 2111 245777888888887654
No 72
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=53.06 E-value=84 Score=24.92 Aligned_cols=143 Identities=15% Similarity=0.154 Sum_probs=76.1
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcc---cCcCce
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAH---EATGCF 276 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~---~~~~~~ 276 (369)
+|.|-|-+||.. +....++....|+..+..+-..+-+. ...|+.. .++... ..+++|
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--HR~p~~l----------------~~~~~~a~~~g~~Vi 70 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--HRTPDYM----------------FEYAETARERGLKVI 70 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTSHHHH----------------HHHHHHTTTTTCCEE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec--cCCHHHH----------------HHHHHHHHhCCCcEE
Confidence 456777777765 56677888888888887754333322 2223321 122211 113347
Q ss_pred eecCChhhHHHHHh---hCCceeecCCCCC--hhHHH-HHHHh--hcCceEE-ecCCCCCCcCHHHHHHHHHHHhcCCcH
Q 048393 277 LTHCGWNSTMEALG---LGVPMLAMPQWSD--QSTNA-KYIMD--VGKMGLK-VPADEKGIVRREAIAHCINEILEGERG 347 (369)
Q Consensus 277 I~hgG~~s~~eal~---~GvP~i~~P~~~d--Q~~na-~~~~~--~~g~g~~-~~~~~~~~~~~~~l~~~i~~~l~~~~~ 347 (369)
|.=.|...-+-.+. .-+|+|.+|.... .-..+ .-+.+ . |+.+. +..++-+..++.-+...|. -++|+
T Consensus 71 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~-- 146 (170)
T 1xmp_A 71 IAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD-- 146 (170)
T ss_dssp EEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH--
T ss_pred EEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH--
Confidence 77766643333322 4689999997542 11221 22333 3 33321 1111000234444554443 34777
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 048393 348 KEIKQNADKWRNFAKEAVAK 367 (369)
Q Consensus 348 ~~~~~~a~~l~~~~~~~~~~ 367 (369)
.++++.+..++..++.+.+
T Consensus 147 -~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 -DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp -HHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHHHHHHh
Confidence 8999999999888887654
No 73
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=52.61 E-value=94 Score=25.38 Aligned_cols=56 Identities=25% Similarity=0.294 Sum_probs=38.1
Q ss_pred HhhCCceeecCC----CCChhHHHHHHHhhcCceEEecCC--C---CC---CcCHHHHHHHHHHHhcCC
Q 048393 289 LGLGVPMLAMPQ----WSDQSTNAKYIMDVGKMGLKVPAD--E---KG---IVRREAIAHCINEILEGE 345 (369)
Q Consensus 289 l~~GvP~i~~P~----~~dQ~~na~~~~~~~g~g~~~~~~--~---~~---~~~~~~l~~~i~~~l~~~ 345 (369)
+..+.|+|++|- ......|...+.+. |+=+..... . ++ ..+.+.+.+.|.+.+++.
T Consensus 120 Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~-G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~~ 187 (201)
T 3lqk_A 120 LRNGKPVVVGISTNDALGLNGINIMRLMAT-KNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRGQ 187 (201)
T ss_dssp HHTTCCEEEEEEETTTTTTTHHHHHHHHTS-TTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTTC
T ss_pred hhcCCCEEEEECCChhHHHhHHHHHHHHHC-CCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhcC
Confidence 446999999993 45667799999988 865544331 0 00 134578888998888764
No 74
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=51.09 E-value=25 Score=26.61 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=26.7
Q ss_pred HHHhcCCCCEEEECCCcc--hHHHHHHHh-------CCCcEEEcccc
Q 048393 28 LVERMNDVDCIVYDSFLP--WALDVAKKF-------GLTGAAFLTQS 65 (369)
Q Consensus 28 ll~~~~~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 65 (369)
++++. +||+||.|..++ -|..+++.+ .+|++.++...
T Consensus 52 ~~~~~-~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 52 MLKKG-DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHH-CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHhC-CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 34444 899999999984 477777765 47887766554
No 75
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=50.84 E-value=86 Score=25.14 Aligned_cols=112 Identities=7% Similarity=0.086 Sum_probs=62.2
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEe-cc----ChHHhhcccCcCc
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVN-WC----PQLGVLAHEATGC 275 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----p~~~iL~~~~~~~ 275 (369)
.+++.-.||+... ....+++.|.+.+..+-.+........+...-.+...++ ..+ |- .+.++...+|+ .
T Consensus 4 ~IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~--~~d~~~~~~~~hi~l~~~aD~-~ 77 (181)
T 1g63_A 4 KLLICATASINVI---NINHYIVELKQHFDEVNILFSPSSKNFINTDVLKLFCDN--LYDEIKDPLLNHINIVENHEY-I 77 (181)
T ss_dssp CEEEEECSCGGGG---GHHHHHHHHTTTSSCEEEEECGGGGGTSCGGGGGGTSSC--EECTTTCTTCCHHHHHHTCSE-E
T ss_pred EEEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHHHhCC--cccccCCCCCccccccccCCE-E
Confidence 3666667777643 234556666666766655554443333332222333344 332 32 34455555664 4
Q ss_pred eeecCChhhHHH-------------HHhhCCceeecCCCC----C---hhHHHHHHHhhcCceE
Q 048393 276 FLTHCGWNSTME-------------ALGLGVPMLAMPQWS----D---QSTNAKYIMDVGKMGL 319 (369)
Q Consensus 276 ~I~hgG~~s~~e-------------al~~GvP~i~~P~~~----d---Q~~na~~~~~~~g~g~ 319 (369)
+|.=|-+||+.- ++..++|+++.|-.. . ...|...+.+. |+-+
T Consensus 78 vIaPaTantlAKiA~GiaDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~~-G~~i 140 (181)
T 1g63_A 78 LVLPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNN-DVKV 140 (181)
T ss_dssp EEEEECHHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHTT-TCEE
T ss_pred EEecCCHHHHHHHHccccCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHHC-CCEE
Confidence 666677776543 366799999999432 2 24577777777 7543
No 76
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=47.99 E-value=28 Score=29.21 Aligned_cols=28 Identities=11% Similarity=0.216 Sum_probs=23.3
Q ss_pred cCceeecCChhhHHHHHhhCCceeecCCC
Q 048393 273 TGCFLTHCGWNSTMEALGLGVPMLAMPQW 301 (369)
Q Consensus 273 ~~~~I~hgG~~s~~eal~~GvP~i~~P~~ 301 (369)
.+++|++||........ ..+|+|-+|..
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCC
Confidence 34499999999999875 68999999975
No 77
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=47.97 E-value=14 Score=31.95 Aligned_cols=53 Identities=11% Similarity=0.159 Sum_probs=36.7
Q ss_pred cCcCceeecCChhhHHHHHhh------CCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 271 EATGCFLTHCGWNSTMEALGL------GVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 271 ~~~~~~I~hgG~~s~~eal~~------GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
+++ +|+=||=||+.+++.. ++|++++|.. -+| .+. .+.++++.+++.+++++
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G--------------~lg-fl~-----~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG--------------HLG-FYA-----DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS--------------SCC-SSC-----CBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC--------------CCC-cCC-----cCCHHHHHHHHHHHHcC
Confidence 455 9999999999999764 8999999751 112 111 24566777777777765
Q ss_pred C
Q 048393 345 E 345 (369)
Q Consensus 345 ~ 345 (369)
.
T Consensus 94 ~ 94 (272)
T 2i2c_A 94 E 94 (272)
T ss_dssp C
T ss_pred C
Confidence 3
No 78
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=47.88 E-value=20 Score=33.67 Aligned_cols=34 Identities=15% Similarity=0.191 Sum_probs=28.6
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 24 TFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
.+++++++. ++|++|.... ...+|+++|||++.+
T Consensus 366 ~le~~i~~~-~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAG-QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHH-TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhc-CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 466778777 8999999966 788999999998864
No 79
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=47.13 E-value=32 Score=25.28 Aligned_cols=64 Identities=11% Similarity=0.106 Sum_probs=42.0
Q ss_pred cccCcCceeecCChhh---------HHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHH
Q 048393 269 AHEATGCFLTHCGWNS---------TMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCIN 339 (369)
Q Consensus 269 ~~~~~~~~I~hgG~~s---------~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~ 339 (369)
..+++ +|--.|..| +..|...|+|+|++=-++.+. --..+++. +.. +- ..+.+.|.++|+
T Consensus 37 ~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~--iV-----~Wn~~~I~~aI~ 105 (111)
T 1eiw_A 37 EDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSE--VV-----GWNPHCIRDALE 105 (111)
T ss_dssp SSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSE--EE-----CSCHHHHHHHHH
T ss_pred ccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cce--ec-----cCCHHHHHHHHH
Confidence 34555 787888877 666788999999665544431 12225555 333 22 478999999998
Q ss_pred HHhc
Q 048393 340 EILE 343 (369)
Q Consensus 340 ~~l~ 343 (369)
..++
T Consensus 106 ~~~~ 109 (111)
T 1eiw_A 106 DALD 109 (111)
T ss_dssp HHHC
T ss_pred hccC
Confidence 8764
No 80
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=46.88 E-value=36 Score=24.46 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=25.4
Q ss_pred HHHhcCCCCEEEECCCcc--hHHHHHHHh-------CCCcEEEcccc
Q 048393 28 LVERMNDVDCIVYDSFLP--WALDVAKKF-------GLTGAAFLTQS 65 (369)
Q Consensus 28 ll~~~~~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 65 (369)
.+++. +||+||.|..++ -+..+.+.+ ++|.+.++...
T Consensus 41 ~l~~~-~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 41 KLSEF-TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHTTB-CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHhc-CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 34444 899999998873 366666655 47888776544
No 81
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=45.51 E-value=37 Score=26.73 Aligned_cols=86 Identities=8% Similarity=-0.021 Sum_probs=50.4
Q ss_pred CceEEEEeCccccCC-HHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCcee-
Q 048393 200 GSVVYVSFGSMATLK-MEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFL- 277 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I- 277 (369)
++++|++..=..... ....+++.+.+++.|..+++ ... ...+. . ..-|--....+..+++.+.+
T Consensus 10 ~~~~y~a~~~F~~~e~~~~~~~l~~~l~~~G~~v~~--P~~--~~~~~--~--------~~i~~~d~~~i~~aD~vVA~l 75 (161)
T 2f62_A 10 RKIYIAGPAVFNPDMGASYYNKVRELLKKENVMPLI--PTD--NEATE--A--------LDIRQKNIQMIKDCDAVIADL 75 (161)
T ss_dssp CEEEEESGGGGSTTTTHHHHHHHHHHHHTTTCEEEC--TTT--TCCSS--H--------HHHHHHHHHHHHHCSEEEEEC
T ss_pred hceEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEC--CCc--cCcch--H--------HHHHHHHHHHHHhCCEEEEEe
Confidence 446666544444455 66788889999888876542 111 00000 0 00022234677788884444
Q ss_pred e-----cCChhhHHHH---HhhCCceeecC
Q 048393 278 T-----HCGWNSTMEA---LGLGVPMLAMP 299 (369)
Q Consensus 278 ~-----hgG~~s~~ea---l~~GvP~i~~P 299 (369)
+ -...||..|. .+.|+|++++-
T Consensus 76 dpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 76 SPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp CCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 2 3567899997 66899999874
No 82
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=45.22 E-value=66 Score=28.76 Aligned_cols=93 Identities=19% Similarity=0.180 Sum_probs=47.4
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCcc--CCCCc-chhc-cc-----CCCcEE--E--ec-----cC
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQ--SKLPE-NFSD-ET-----SQKGLV--V--NW-----CP 263 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~--~~~~~-~~~~-~~-----~~~~~~--~--~~-----~p 263 (369)
+++.+.||-+.. .-..++++.|.+.+..|+|....... ..+++ ++.- .. +.+... . .| +-
T Consensus 5 i~i~~GGTgGHi--~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (365)
T 3s2u_A 5 VLIMAGGTGGHV--FPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLF 82 (365)
T ss_dssp EEEECCSSHHHH--HHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHHHH
T ss_pred EEEEcCCCHHHH--HHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHH
Confidence 555555564421 11356788898889999998643211 01111 1100 00 000000 0 00 11
Q ss_pred hH-Hhhc--ccCcCceeecCChhhH---HHHHhhCCceeec
Q 048393 264 QL-GVLA--HEATGCFLTHCGWNST---MEALGLGVPMLAM 298 (369)
Q Consensus 264 ~~-~iL~--~~~~~~~I~hgG~~s~---~eal~~GvP~i~~ 298 (369)
+. .++. .||+ +|++||.-+. .-|...|+|+++.
T Consensus 83 ~~~~~l~~~~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 83 QALRVIRQLRPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHHHHCCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhcCCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 11 3444 5666 9999998765 4566789999863
No 83
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=44.48 E-value=20 Score=32.84 Aligned_cols=36 Identities=19% Similarity=0.403 Sum_probs=27.5
Q ss_pred ChHHhhcccCcCceeecCChhhHHHHHhh----CC-ceeecCC
Q 048393 263 PQLGVLAHEATGCFLTHCGWNSTMEALGL----GV-PMLAMPQ 300 (369)
Q Consensus 263 p~~~iL~~~~~~~~I~hgG~~s~~eal~~----Gv-P~i~~P~ 300 (369)
+..++-..+++ +|+=||=||+..|+.. ++ |++++..
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 33455566777 9999999999999653 67 7888863
No 84
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=44.38 E-value=21 Score=30.05 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=22.5
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| ++|.|+.. .-+..=|.++|||+|++.-+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 488 45567665 335556899999999976554
No 85
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=43.81 E-value=70 Score=23.92 Aligned_cols=63 Identities=11% Similarity=0.061 Sum_probs=39.0
Q ss_pred hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 048393 291 LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAK 362 (369)
Q Consensus 291 ~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 362 (369)
..+|+|++--..+ ........+. |+--.+.+ .++.++|..+|++++... .++...+++.+.+.
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~k----P~~~~~L~~~i~~~~~~~---~~~~~~~~~~~~~~ 136 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQD-GAYDFIAK----PFAADRLVQSARRAEEKR---RLVMENRSLRRAAE 136 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHT-TCCEEEES----SCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhc-CCCeEEeC----CCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 4788888754443 3344555556 76545554 479999999999998654 44444444444433
No 86
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=43.15 E-value=73 Score=25.90 Aligned_cols=140 Identities=9% Similarity=0.046 Sum_probs=72.2
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEec-----cChHHhhcccCcCc
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNW-----CPQLGVLAHEATGC 275 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~iL~~~~~~~ 275 (369)
.+++.-.||++... ...+++.|.+.+..+-.+........+.....+...++++..-| +.+.++...+|+ .
T Consensus 10 ~IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~~~~l~~~v~~~~~~~~~~~~hi~l~~~aD~-~ 85 (194)
T 1p3y_1 10 KLLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKTAEDLIPAHTVSYFCDHVYSEHGENGKRHSHVEIGRWADI-Y 85 (194)
T ss_dssp EEEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHHHHHHSCHHHHGGGSSEEECTTCSSSCCCCHHHHHHHCSE-E
T ss_pred EEEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHHhcCCEeccccccCCCcCcccccccCCE-E
Confidence 36666677776422 23455556555665554444322111211111222233111112 234455555554 3
Q ss_pred eeecCChhhHHHH-------------HhhCCceeecCCCC----C---hhHHHHHHHhhcCceEEecCCC----------
Q 048393 276 FLTHCGWNSTMEA-------------LGLGVPMLAMPQWS----D---QSTNAKYIMDVGKMGLKVPADE---------- 325 (369)
Q Consensus 276 ~I~hgG~~s~~ea-------------l~~GvP~i~~P~~~----d---Q~~na~~~~~~~g~g~~~~~~~---------- 325 (369)
+|.=|-+||+.-. +..++|+++.|-.. . ...|...+.+. |+=+.-....
T Consensus 86 vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~iv~p~~g~~f~lacg~~ 164 (194)
T 1p3y_1 86 CIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKD-GHIVIEPVEIMAFEIATGTR 164 (194)
T ss_dssp EEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHH-TCEECCCBCCC---------
T ss_pred EEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHC-CCEEECCCCCcccccccCCc
Confidence 6666666665443 55789999999521 2 24577888887 7643322221
Q ss_pred -C-C-CcCHHHHHHHHHHHhcCC
Q 048393 326 -K-G-IVRREAIAHCINEILEGE 345 (369)
Q Consensus 326 -~-~-~~~~~~l~~~i~~~l~~~ 345 (369)
. + -.+.++|.+.+.+.+.+.
T Consensus 165 g~~g~~~~~~~iv~~v~~~l~~~ 187 (194)
T 1p3y_1 165 KPNRGLITPDKALLAIEKGFKER 187 (194)
T ss_dssp ---CBCCCHHHHHHHHHHHCC--
T ss_pred CcCCCCCCHHHHHHHHHHHhccc
Confidence 1 1 246888888888888654
No 87
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=43.00 E-value=1.3e+02 Score=24.26 Aligned_cols=101 Identities=11% Similarity=0.035 Sum_probs=55.0
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCC-ccCCCCcchhcccCCCcEEEeccChH
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRES-EQSKLPENFSDETSQKGLVVNWCPQL 265 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~ 265 (369)
..++-+++... ...+|+.|... ....+..++..+.+-.++=+.... .....+... -....++++...+
T Consensus 33 A~~lg~~la~~---g~~lv~GGG~~----GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~~----~~~~i~~~~~~~R 101 (189)
T 3sbx_A 33 AGAVGAAIAAR---GWTLVWGGGHV----SAMGAVSSAARAHGGWTVGVIPKMLVHRELADHD----ADELVVTETMWER 101 (189)
T ss_dssp HHHHHHHHHHT---TCEEEECCBCS----HHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCTT----CSEEEEESSHHHH
T ss_pred HHHHHHHHHHC---CCEEEECCCcc----CHHHHHHHHHHHcCCcEEEEcCchhhhcccCCCC----CCeeEEcCCHHHH
Confidence 45566677643 36777776542 244556666666666666554432 111111110 0123445555544
Q ss_pred --HhhcccCcCceeecCChhhHHHHHh---------hCCceeecC
Q 048393 266 --GVLAHEATGCFLTHCGWNSTMEALG---------LGVPMLAMP 299 (369)
Q Consensus 266 --~iL~~~~~~~~I~hgG~~s~~eal~---------~GvP~i~~P 299 (369)
.+..+++. .++--||.||+-|... +++|++++=
T Consensus 102 k~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 102 KQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp HHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 34456664 4556678899988753 589999874
No 88
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=42.65 E-value=25 Score=29.37 Aligned_cols=32 Identities=22% Similarity=0.183 Sum_probs=23.9
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| ++|.|+.. .-+..=|.++|||+|++.-+.
T Consensus 149 ~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn 182 (218)
T 3r8n_B 149 LPDALFVIDADHEHIAIKEANNLGIPVFAIVDTN 182 (218)
T ss_dssp CCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSS
T ss_pred CCCeEEecCcccccHHHHHHHHhCCCEEEEEeCc
Confidence 577 67888776 335556899999999986554
No 89
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=42.65 E-value=92 Score=25.15 Aligned_cols=101 Identities=13% Similarity=0.043 Sum_probs=57.6
Q ss_pred hhHHHHHhccCCCCceEEEEeCcc-ccCCHHHHHHHHHHHHhCCCcEEEEEeCCcc-CCCCcchhcccCCCcEEEeccCh
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSM-ATLKMEQMEELAWGLKASDKYFLWVVRESEQ-SKLPENFSDETSQKGLVVNWCPQ 264 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~ 264 (369)
..++-+++... +..+|+.|.. + ...+..++..+.+-.++=+....-. ...+.. .-.+..++..++.
T Consensus 22 A~~lg~~La~~---g~~lV~GGg~~G-----iM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~----~~~~~~~~~~~~~ 89 (191)
T 1t35_A 22 AAELGVYMAEQ---GIGLVYGGSRVG-----LMGTIADAIMENGGTAIGVMPSGLFSGEVVHQ----NLTELIEVNGMHE 89 (191)
T ss_dssp HHHHHHHHHHT---TCEEEECCCCSH-----HHHHHHHHHHTTTCCEEEEEETTCCHHHHTTC----CCSEEEEESHHHH
T ss_pred HHHHHHHHHHC---CCEEEECCCccc-----HHHHHHHHHHHcCCeEEEEeCchhcccccccC----CCCccccCCCHHH
Confidence 45666677654 3788888764 3 3455556655666666655543210 000000 0012344566666
Q ss_pred H-Hhh-cccCcCceeecCChhhHHHH---H------hhCCceeecCC
Q 048393 265 L-GVL-AHEATGCFLTHCGWNSTMEA---L------GLGVPMLAMPQ 300 (369)
Q Consensus 265 ~-~iL-~~~~~~~~I~hgG~~s~~ea---l------~~GvP~i~~P~ 300 (369)
+ .++ ..++ ..++--||.||+-|. + .+++|++++-.
T Consensus 90 Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 90 RKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 5 344 4444 456778889998876 3 27899998853
No 90
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=42.28 E-value=36 Score=28.47 Aligned_cols=40 Identities=15% Similarity=0.137 Sum_probs=28.1
Q ss_pred HHHHHHHHhcC-CCCEEEECCCcch-------HHHHHHHhCCCcEEEc
Q 048393 23 QTFTELVERMN-DVDCIVYDSFLPW-------ALDVAKKFGLTGAAFL 62 (369)
Q Consensus 23 ~~l~~ll~~~~-~~D~vI~D~~~~~-------~~~~A~~lgiP~v~~~ 62 (369)
+.+.++++.+. +||+|++|-.... |..+.-.+++|+|.+.
T Consensus 91 P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 91 PLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 45555666655 8999999977533 4456666699999863
No 91
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=41.27 E-value=65 Score=25.54 Aligned_cols=99 Identities=25% Similarity=0.246 Sum_probs=53.2
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeC--CccCCCCcchhcccCCCcEEEeccCh
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRE--SEQSKLPENFSDETSQKGLVVNWCPQ 264 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~ 264 (369)
-.++-+++... +..+|+.|..+ ...+..++..+.+-.++-+... ......+.... ....++..++.
T Consensus 22 A~~lg~~La~~---g~~lV~Ggg~G-----iM~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~~~~----~~~~~~~~f~~ 89 (171)
T 1weh_A 22 WVRYGEVLAEE---GFGLACGGYQG-----GMEALARGVKAKGGLVVGVTAPAFFPERRGPNPFV----DLELPAATLPQ 89 (171)
T ss_dssp HHHHHHHHHHT---TEEEEECCSST-----HHHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTC----SEECCCSSHHH
T ss_pred HHHHHHHHHHC---CCEEEeCChhh-----HHHHHHHHHHHcCCcEEEEeccccCcccccccCCC----ceeeecCCHHH
Confidence 45666777653 48899988754 3444455555555555544332 11111111100 01123455665
Q ss_pred H-Hhh-cccCcCceeecCChhhHHHHH---h-------hCCceeecC
Q 048393 265 L-GVL-AHEATGCFLTHCGWNSTMEAL---G-------LGVPMLAMP 299 (369)
Q Consensus 265 ~-~iL-~~~~~~~~I~hgG~~s~~eal---~-------~GvP~i~~P 299 (369)
+ .++ ..++ ..++--||.||+-|.. . +++| +.+=
T Consensus 90 Rk~~~~~~sd-a~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~ 134 (171)
T 1weh_A 90 RIGRLLDLGA-GYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD 134 (171)
T ss_dssp HHHHHHHHEE-EEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC
T ss_pred HHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC
Confidence 5 344 3444 4567788899987763 3 6899 7764
No 92
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=40.45 E-value=1e+02 Score=28.40 Aligned_cols=142 Identities=12% Similarity=0.034 Sum_probs=70.0
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhccc-CcCcee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHE-ATGCFL 277 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~-~~~~~I 277 (369)
..+.|-|-+||.. +....++....++..|..+-..+-+. ...|+.. ..+.-+.. -... ++ +|
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa--HR~p~~~----------~~~~~~~~-~~g~~~v--iI 326 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA--HKGPDET----------LRIKAEYE-GDGIPTV--FV 326 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTCHHHH----------HHHHHHHH-TTCCCEE--EE
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec--cCCHHHH----------HHHHHHHH-HCCCCeE--EE
Confidence 3456777778775 55677788888888887754333222 2233321 11111000 0112 23 77
Q ss_pred ecCChh----hHHHHHhhCCceeecCCCCChhHHHHHHHhh---cCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHH
Q 048393 278 THCGWN----STMEALGLGVPMLAMPQWSDQSTNAKYIMDV---GKMGLKVPADEKGIVRREAIAHCINEILEGERGKEI 350 (369)
Q Consensus 278 ~hgG~~----s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~---~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 350 (369)
.=+|.. ++.-++ .-+|+|++|....-.-....+.-. -|+.+..-.+ ..++.-+...|. -++|+ .+
T Consensus 327 a~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~g~pvatv~~---~~nAa~~A~~Il-~~~~~---~l 398 (425)
T 2h31_A 327 AVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLS---PEGSAQFAAQIF-GLSNH---LV 398 (425)
T ss_dssp EECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCSSCCCEECCC---HHHHHHHHHHHH-HTTCH---HH
T ss_pred EEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCCCCceEEecC---chHHHHHHHHHH-ccCCH---HH
Confidence 776663 333333 478999999752211111222212 0333222112 334444554443 34666 67
Q ss_pred HHHHHHHHHHHHHHH
Q 048393 351 KQNADKWRNFAKEAV 365 (369)
Q Consensus 351 ~~~a~~l~~~~~~~~ 365 (369)
+++.+..+......+
T Consensus 399 ~~kl~~~~~~~~~~v 413 (425)
T 2h31_A 399 WSKLRASILNTWISL 413 (425)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 777766666655544
No 93
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=40.38 E-value=1.3e+02 Score=23.49 Aligned_cols=137 Identities=18% Similarity=0.198 Sum_probs=64.2
Q ss_pred EEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCCh
Q 048393 203 VYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGW 282 (369)
Q Consensus 203 i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~ 282 (369)
|-|-+||.. +....++....++..+..+-..+-+. ...|+.. .++...+.-++||.=.|.
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa--HR~p~~~----------------~~~~~~a~~~ViIa~AG~ 61 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA--HRTPELV----------------EEIVKNSKADVFIAIAGL 61 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTCHHHH----------------HHHHHHCCCSEEEEEEES
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--cCCHHHH----------------HHHHHhcCCCEEEEEcCc
Confidence 334455553 55667778888888887643333222 2223321 122221111337776665
Q ss_pred hhHHHHHh---hCCceeecCCCCChhHHHHHHHhhc---CceE-EecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 048393 283 NSTMEALG---LGVPMLAMPQWSDQSTNAKYIMDVG---KMGL-KVPADEKGIVRREAIAHCINEILEGERGKEIKQNAD 355 (369)
Q Consensus 283 ~s~~eal~---~GvP~i~~P~~~dQ~~na~~~~~~~---g~g~-~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~ 355 (369)
..-+-.+. .-+|+|.+|....-.-....+.-.. |+.+ .+..+ +..++.-+...|. -++|+ .++++.+
T Consensus 62 aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~gvpVatV~I~--~~~nAa~lA~~Il-~~~d~---~l~~kl~ 135 (157)
T 2ywx_A 62 AAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGID--RGENAAILALEIL-ALKDE---NIAKKLI 135 (157)
T ss_dssp SCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCTTSCCEECCTT--CHHHHHHHHHHHH-TTTCH---HHHHHHH
T ss_pred hhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCCCCeeEEEecC--CcHHHHHHHHHHH-hcCCH---HHHHHHH
Confidence 43333222 3578888887222111122222220 3222 11211 0344444544443 23566 6777777
Q ss_pred HHHHHHHHHH
Q 048393 356 KWRNFAKEAV 365 (369)
Q Consensus 356 ~l~~~~~~~~ 365 (369)
..++..++.+
T Consensus 136 ~~r~~~~~~v 145 (157)
T 2ywx_A 136 EYREKMKKKV 145 (157)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777666554
No 94
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=39.64 E-value=22 Score=30.42 Aligned_cols=40 Identities=15% Similarity=0.193 Sum_probs=26.6
Q ss_pred HHHHHHHhcCCCCEEEE----------CCCcch---HHHHHHHhCCCcEEEccc
Q 048393 24 TFTELVERMNDVDCIVY----------DSFLPW---ALDVAKKFGLTGAAFLTQ 64 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~----------D~~~~~---~~~~A~~lgiP~v~~~~~ 64 (369)
.+..++.+. +||+||+ |..+.+ |..=|..+|||.|++|-.
T Consensus 76 al~~~l~~~-~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 76 GYRVILEEK-KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp HHHTTTTTC-CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hhhhhcCCC-CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 344555555 8999999 545433 333466779999998743
No 95
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=39.59 E-value=24 Score=30.19 Aligned_cols=32 Identities=22% Similarity=0.106 Sum_probs=23.5
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| ++|+|... .-+..=|.++|||+|++.-+.
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 678 55577765 345666999999999986655
No 96
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=39.18 E-value=1.4e+02 Score=23.64 Aligned_cols=147 Identities=16% Similarity=0.174 Sum_probs=74.3
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
+.|.|-|-+||.. +....++....|+..+..+-..+-+. ...|+.+ ..|.-. .....++++|.
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--HR~p~~l----------~~~~~~---a~~~g~~ViIa 73 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA--HRMPDEM----------FDYAEK---ARERGLRAIIA 73 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTSHHHH----------HHHHHH---HTTTTCSEEEE
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc--ccCHHHH----------HHHHHH---HHhcCCeEEEE
Confidence 4557777788875 55677888888888887754333332 2223321 111110 11123344776
Q ss_pred cCChh----hHHHHHhhCCceeecCCCCC---hhHHHHHHHhh-cCceEEec-CCCCCCcCHHHHHHHHHHHhcCCcHHH
Q 048393 279 HCGWN----STMEALGLGVPMLAMPQWSD---QSTNAKYIMDV-GKMGLKVP-ADEKGIVRREAIAHCINEILEGERGKE 349 (369)
Q Consensus 279 hgG~~----s~~eal~~GvP~i~~P~~~d---Q~~na~~~~~~-~g~g~~~~-~~~~~~~~~~~l~~~i~~~l~~~~~~~ 349 (369)
=.|.- ++.-+ ..-+|+|.+|.... -.+--..+.+. -|+.+..- .+..+..++.-+...|- -++|+ .
T Consensus 74 ~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~IL-a~~d~---~ 148 (173)
T 4grd_A 74 GAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSIL-SGNSV---D 148 (173)
T ss_dssp EEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-TTSCH---H
T ss_pred eccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHH-cCCCH---H
Confidence 65543 23322 45799999996543 22222222222 02322211 11000122222333221 23677 8
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 048393 350 IKQNADKWRNFAKEAVAK 367 (369)
Q Consensus 350 ~~~~a~~l~~~~~~~~~~ 367 (369)
++++.+..+++.++.+.+
T Consensus 149 l~~kl~~~r~~~~~~v~~ 166 (173)
T 4grd_A 149 YANRLAAFRVRQNEAAHA 166 (173)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999999888888877653
No 97
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.11 E-value=24 Score=28.80 Aligned_cols=31 Identities=3% Similarity=0.185 Sum_probs=25.0
Q ss_pred cCcCceeecCChhhHHHHHhhCCceeecCCCC
Q 048393 271 EATGCFLTHCGWNSTMEALGLGVPMLAMPQWS 302 (369)
Q Consensus 271 ~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~ 302 (369)
...+++|++||........ .++|+|-+|..+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4445599999999999875 689999999764
No 98
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=38.64 E-value=1.5e+02 Score=24.05 Aligned_cols=101 Identities=13% Similarity=0.074 Sum_probs=54.0
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCc-cCCCCcchhcccCCCcEEEeccChH
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESE-QSKLPENFSDETSQKGLVVNWCPQL 265 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~ 265 (369)
..++-+++..+ ...+|+.|... ....+..++..+.+-.++=+..... ....+... -....+++....+
T Consensus 42 A~~lg~~La~~---g~~lV~GGG~~----GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~~----~~~~i~~~~~~~R 110 (199)
T 3qua_A 42 AAEVGSSIAAR---GWTLVSGGGNV----SAMGAVAQAARAKGGHTVGVIPKALVHRELADVD----AAELIVTDTMRER 110 (199)
T ss_dssp HHHHHHHHHHT---TCEEEECCBCS----HHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCTT----SSEEEEESSHHHH
T ss_pred HHHHHHHHHHC---CCEEEECCCcc----CHHHHHHHHHHHcCCcEEEEeCchhhhccccCCC----CCeeEEcCCHHHH
Confidence 35566666543 26667766541 2345555555555656555544321 11111110 0123455555544
Q ss_pred -H-hhcccCcCceeecCChhhHHHHHh---------hCCceeecC
Q 048393 266 -G-VLAHEATGCFLTHCGWNSTMEALG---------LGVPMLAMP 299 (369)
Q Consensus 266 -~-iL~~~~~~~~I~hgG~~s~~eal~---------~GvP~i~~P 299 (369)
. +...++. .++--||.||+-|... +++|++.+-
T Consensus 111 k~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 111 KREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp HHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 3 3455555 4556688899888743 589999875
No 99
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=38.55 E-value=41 Score=25.05 Aligned_cols=38 Identities=18% Similarity=0.318 Sum_probs=25.2
Q ss_pred HHHHhcCCCCEEEECCCcc--hHHHHHHHhC---------CCcEEEcccc
Q 048393 27 ELVERMNDVDCIVYDSFLP--WALDVAKKFG---------LTGAAFLTQS 65 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~--~~~~~A~~lg---------iP~v~~~~~~ 65 (369)
+.++.. +||+||.|..++ -+..+.+.+. +|.+.++...
T Consensus 52 ~~~~~~-~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 52 DAMAEE-DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp HHHHHS-CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred HHHhcC-CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 334444 899999998863 3666666542 7777776544
No 100
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=38.42 E-value=30 Score=28.56 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=23.0
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| ++|.|+.. --+..=|.++|||+|++.-+.
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 148 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSN 148 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCC
Confidence 578 55577765 335556999999999986554
No 101
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=37.90 E-value=57 Score=23.89 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=24.6
Q ss_pred HHHhcCCCCEEEECCCcc--hHHHHHHHh-------CCCcEEEcccc
Q 048393 28 LVERMNDVDCIVYDSFLP--WALDVAKKF-------GLTGAAFLTQS 65 (369)
Q Consensus 28 ll~~~~~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 65 (369)
.+.+. +||+||.|..++ -+..+.+.+ .+|.+.++...
T Consensus 43 ~~~~~-~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 43 QIYKN-LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHS-CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHhC-CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 34444 899999998873 356655544 57777766544
No 102
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=37.88 E-value=1.5e+02 Score=23.45 Aligned_cols=144 Identities=15% Similarity=0.178 Sum_probs=70.7
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecC
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHC 280 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hg 280 (369)
+.|-|-+||.. +....++....|+..+..+-..+-+. ...|+.. ..|... .....+++||.=.
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--HR~p~~~----------~~~~~~---a~~~g~~ViIa~A 69 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA--HRTPKET----------VEFVEN---ADNRGCAVFIAAA 69 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTSHHHH----------HHHHHH---HHHTTEEEEEEEE
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc--cCCHHHH----------HHHHHH---HHhCCCcEEEEEC
Confidence 45666677764 55677888888888887754443332 2223321 111110 0112233388777
Q ss_pred ChhhHHHHH---hhCCceeecCCCCChh---HHHHHHHh--hcCceEE-ecCCCCCCcCHHHHHHHHHHHhcCCcHHHHH
Q 048393 281 GWNSTMEAL---GLGVPMLAMPQWSDQS---TNAKYIMD--VGKMGLK-VPADEKGIVRREAIAHCINEILEGERGKEIK 351 (369)
Q Consensus 281 G~~s~~eal---~~GvP~i~~P~~~dQ~---~na~~~~~--~~g~g~~-~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 351 (369)
|...-+-.+ ..-+|+|.+|...-.. .-..-+.+ . |+.+. +..++.+.+++.-+...|. -++|+ .++
T Consensus 70 G~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il-~~~d~---~l~ 144 (169)
T 3trh_A 70 GLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQII-ALQDK---SIA 144 (169)
T ss_dssp CSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHHH-HTTCH---HHH
T ss_pred ChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHHH-cCCCH---HHH
Confidence 664333322 2468999999764221 11222222 2 33211 1111000223333433332 23677 788
Q ss_pred HHHHHHHHHHHHHHh
Q 048393 352 QNADKWRNFAKEAVA 366 (369)
Q Consensus 352 ~~a~~l~~~~~~~~~ 366 (369)
++.+..++..++.+.
T Consensus 145 ~kl~~~r~~~~~~v~ 159 (169)
T 3trh_A 145 QKLVQQRTAKRETLK 159 (169)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888777776553
No 103
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=37.67 E-value=31 Score=29.45 Aligned_cols=32 Identities=19% Similarity=0.106 Sum_probs=23.2
Q ss_pred CCCE-EEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVDC-IVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D~-vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.||+ +|+|... --+..=|.++|||+|++.-+.
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 184 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 184 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcCC
Confidence 6784 5567766 335556999999999986654
No 104
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=37.23 E-value=45 Score=27.09 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=27.5
Q ss_pred CCCEEEECCCcchHHHHHHHhCCCcEEEcccchHHHH
Q 048393 34 DVDCIVYDSFLPWALDVAKKFGLTGAAFLTQSCAVAS 70 (369)
Q Consensus 34 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 70 (369)
++|+||.|.. +..+|+++|+|.+.+.+..-+...
T Consensus 142 G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI~~ 175 (196)
T 2q5c_A 142 NIKIVVSGKT---VTDEAIKQGLYGETINSGEESLRR 175 (196)
T ss_dssp TCCEEEECHH---HHHHHHHTTCEEEECCCCHHHHHH
T ss_pred CCeEEECCHH---HHHHHHHcCCcEEEEecCHHHHHH
Confidence 8999999955 788999999999998775544433
No 105
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=36.92 E-value=65 Score=26.60 Aligned_cols=68 Identities=13% Similarity=0.113 Sum_probs=41.1
Q ss_pred HHHhcCCCceeeeCccCCCccccccccccccccccccccChhHHHHHhc-cCCCCceEEEEeCccccCCHHHHHHHHHHH
Q 048393 147 EWLGKQHWLLRTIGPTLPSIYLDKQIEDDKEYGFSIFETNIESCMKWLN-DRANGSVVYVSFGSMATLKMEQMEELAWGL 225 (369)
Q Consensus 147 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~-~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l 225 (369)
..+...++.+++.|+..| .+++.+-.. ..++ +|.+|+++........+.++++.+
T Consensus 114 ~~l~~~G~~Vi~LG~~vp----------------------~e~iv~~~~~~~~d--~v~l~~S~l~~~~~~~~~~~i~~l 169 (215)
T 3ezx_A 114 TMLGANGFQIVDLGVDVL----------------------NENVVEEAAKHKGE--KVLLVGSALMTTSMLGQKDLMDRL 169 (215)
T ss_dssp HHHHHTSCEEEECCSSCC----------------------HHHHHHHHHHTTTS--CEEEEEECSSHHHHTHHHHHHHHH
T ss_pred HHHHHCCCeEEEcCCCCC----------------------HHHHHHHHHHcCCC--EEEEEchhcccCcHHHHHHHHHHH
Confidence 446677788999997654 344433333 3333 788855555444445678888888
Q ss_pred HhCCC--cEEEEEeC
Q 048393 226 KASDK--YFLWVVRE 238 (369)
Q Consensus 226 ~~~~~--~~i~~~~~ 238 (369)
++.+. ++-+.+++
T Consensus 170 ~~~~~~~~v~v~vGG 184 (215)
T 3ezx_A 170 NEEKLRDSVKCMFGG 184 (215)
T ss_dssp HHTTCGGGSEEEEES
T ss_pred HHcCCCCCCEEEEEC
Confidence 88764 44334444
No 106
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=36.70 E-value=1.6e+02 Score=23.51 Aligned_cols=144 Identities=17% Similarity=0.215 Sum_probs=76.8
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeec
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTH 279 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~h 279 (369)
++.|-|-+||.. +....++..+.|++.+..+-..+-+.. ..|+.+ ..|. .-.....++++|.=
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAH--Rtp~~l----------~~~~---~~a~~~g~~ViIa~ 84 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH--RTPDYM----------FEYA---ETARERGLKVIIAG 84 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--TSHHHH----------HHHH---HHTTTTTCCEEEEE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEccc--cChHHH----------HHHH---HHHHhcCceEEEEe
Confidence 567888889875 556788888889888877654443332 222221 1111 00112233447766
Q ss_pred CChhhHHH---HHhhCCceeecCCCC---ChhHHHHHHHhhcCceEEec---CCCCCCcCHHHHHHHHHHHh--cCCcHH
Q 048393 280 CGWNSTME---ALGLGVPMLAMPQWS---DQSTNAKYIMDVGKMGLKVP---ADEKGIVRREAIAHCINEIL--EGERGK 348 (369)
Q Consensus 280 gG~~s~~e---al~~GvP~i~~P~~~---dQ~~na~~~~~~~g~g~~~~---~~~~~~~~~~~l~~~i~~~l--~~~~~~ 348 (369)
.|.-.-+- |-..-+|+|++|... +-.+....+.+. -.|+-+- .+..+..++.-+.. ++| .|+
T Consensus 85 AG~aahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSivQM-P~GvpVaTvaig~~ga~NAallA~---qILa~~d~--- 157 (181)
T 4b4k_A 85 AGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQM-PGGVPVATVAIGKAGSTNAGLLAA---QILGSFHD--- 157 (181)
T ss_dssp ECSSCCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHHTC-CTTCCCEECCSSHHHHHHHHHHHH---HHHTTTCH---
T ss_pred ccccccchhhHHhcCCCCEEEEecCCCCccchhhHHHHHhC-CCCCceEEEecCCccHHHHHHHHH---HHHccCCH---
Confidence 55532222 234568999999854 333334444444 3344322 11000011222322 343 667
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 048393 349 EIKQNADKWRNFAKEAVAK 367 (369)
Q Consensus 349 ~~~~~a~~l~~~~~~~~~~ 367 (369)
.++++.+..++..++.+.+
T Consensus 158 ~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 158 DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7888888888888877654
No 107
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=36.34 E-value=64 Score=22.91 Aligned_cols=38 Identities=24% Similarity=0.429 Sum_probs=25.0
Q ss_pred HHHHhcCCCCEEEECCCcc--hHHHHHHHh----CCCcEEEcccc
Q 048393 27 ELVERMNDVDCIVYDSFLP--WALDVAKKF----GLTGAAFLTQS 65 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~--~~~~~A~~l----giP~v~~~~~~ 65 (369)
+.+++. +||+||.|..++ -+..+.+.+ ++|.+.++...
T Consensus 40 ~~~~~~-~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 40 EMVEEL-QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHTT-CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHhhC-CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 344444 899999998874 355555544 67877766544
No 108
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=36.23 E-value=1.7e+02 Score=23.50 Aligned_cols=141 Identities=16% Similarity=0.212 Sum_probs=74.6
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcc---cCcCcee
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAH---EATGCFL 277 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~---~~~~~~I 277 (369)
+.|-|-+||.. +....++....|+..+..+-..+-+. ...|+.. .++... ..+++||
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--HR~p~~l----------------~~~~~~a~~~g~~ViI 81 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA--HRTPDRL----------------ADYARTAAERGLNVII 81 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTCHHHH----------------HHHHHHTTTTTCCEEE
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--cCCHHHH----------------HHHHHHHHhCCCcEEE
Confidence 45666677764 55677888888888887754333322 2223321 122211 1133477
Q ss_pred ecCChh----hHHHHHhhCCceeecCCCCC--hhHHH-HHHHh--hcCceEE-ecCCCCCCcCHHHHHHHHHHHhcCCcH
Q 048393 278 THCGWN----STMEALGLGVPMLAMPQWSD--QSTNA-KYIMD--VGKMGLK-VPADEKGIVRREAIAHCINEILEGERG 347 (369)
Q Consensus 278 ~hgG~~----s~~eal~~GvP~i~~P~~~d--Q~~na-~~~~~--~~g~g~~-~~~~~~~~~~~~~l~~~i~~~l~~~~~ 347 (369)
.=.|.. ++.-++ .-+|+|.+|.... .-..+ .-+.+ . |+.+. +..++-+..++.-+...|. -++|+
T Consensus 82 a~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~-- 156 (182)
T 1u11_A 82 AGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNP-- 156 (182)
T ss_dssp EEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCH--
T ss_pred EecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCH--
Confidence 766654 333333 5789999997542 11121 22333 3 44421 1211000234444444443 34777
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 048393 348 KEIKQNADKWRNFAKEAVAK 367 (369)
Q Consensus 348 ~~~~~~a~~l~~~~~~~~~~ 367 (369)
.++++.+..++..++.+.+
T Consensus 157 -~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 157 -ALAARLETWRALQTASVPN 175 (182)
T ss_dssp -HHHHHHHHHHHHHHHHSCS
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 8999999999888876643
No 109
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=35.88 E-value=60 Score=27.36 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=29.0
Q ss_pred HHHHHHHHHhcC-CCCEEEECCCc-------chHHHHHHHhCCCcEEE
Q 048393 22 LQTFTELVERMN-DVDCIVYDSFL-------PWALDVAKKFGLTGAAF 61 (369)
Q Consensus 22 ~~~l~~ll~~~~-~~D~vI~D~~~-------~~~~~~A~~lgiP~v~~ 61 (369)
.+.+.++++.+. +||++++|-.. --|..+.-.+++|+|.+
T Consensus 94 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 94 IPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 355666666665 89999999764 23556777788999985
No 110
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=35.62 E-value=37 Score=27.91 Aligned_cols=32 Identities=25% Similarity=0.251 Sum_probs=23.2
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| ++|.|+.. --+..=|.++|||+|++.-+.
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~DTn 144 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREAVEIGIPIVALVDTE 144 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHHHHHTCCEEEEECTT
T ss_pred CCCeEEEeCCccchHHHHHHHHcCCCEEEEEcCC
Confidence 578 56677766 335556899999999976554
No 111
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=34.59 E-value=1.7e+02 Score=23.21 Aligned_cols=146 Identities=16% Similarity=0.217 Sum_probs=73.1
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecC
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHC 280 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hg 280 (369)
+.|-|-+||.. +....++....|+..+..+-..+-+. ...|+.. ..|... .....+++||.=.
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa--HR~p~~~----------~~~~~~---a~~~g~~ViIa~A 75 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA--HRTPDRL----------FSFAEQ---AEANGLHVIIAGN 75 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTCHHHH----------HHHHHH---TTTTTCSEEEEEE
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--cCCHHHH----------HHHHHH---HHhCCCcEEEEEC
Confidence 34666677764 55677888888888887754443332 2233321 111100 1112233488777
Q ss_pred ChhhHHHHH---hhCCceeecCCCCCh---hHHHHHHHhh-cCceEE-ecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHH
Q 048393 281 GWNSTMEAL---GLGVPMLAMPQWSDQ---STNAKYIMDV-GKMGLK-VPADEKGIVRREAIAHCINEILEGERGKEIKQ 352 (369)
Q Consensus 281 G~~s~~eal---~~GvP~i~~P~~~dQ---~~na~~~~~~-~g~g~~-~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 352 (369)
|...-+-.+ ..-+|+|.+|....- ..-..-+.+. -|+.+. +..++.+.+++.-+...|. -++|+ .+++
T Consensus 76 G~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~IL-a~~d~---~l~~ 151 (174)
T 3kuu_A 76 GGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQIL-ALHDT---ELAG 151 (174)
T ss_dssp ESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHH-HTTCH---HHHH
T ss_pred ChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHH-cCCCH---HHHH
Confidence 664333222 246899999975421 1111222221 032211 1111000223334443332 23777 8999
Q ss_pred HHHHHHHHHHHHHhc
Q 048393 353 NADKWRNFAKEAVAK 367 (369)
Q Consensus 353 ~a~~l~~~~~~~~~~ 367 (369)
+.+..++..++.+.+
T Consensus 152 kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 152 RLAHWRQSQTDDVLD 166 (174)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999988887654
No 112
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=33.37 E-value=1.9e+02 Score=25.53 Aligned_cols=64 Identities=14% Similarity=0.122 Sum_probs=39.0
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+.+|.+|.++ ..+++.+...|.+++..-..... . +.+ ..........++++.+|+ ++.
T Consensus 137 gktvGIiGlG~IG-------~~vA~~l~~~G~~V~~~dr~~~~--~-~~~-------~~~~~~~~l~ell~~aDv--V~l 197 (324)
T 3evt_A 137 GQQLLIYGTGQIG-------QSLAAKASALGMHVIGVNTTGHP--A-DHF-------HETVAFTATADALATANF--IVN 197 (324)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTCEEEEEESSCCC--C-TTC-------SEEEEGGGCHHHHHHCSE--EEE
T ss_pred CCeEEEECcCHHH-------HHHHHHHHhCCCEEEEECCCcch--h-HhH-------hhccccCCHHHHHhhCCE--EEE
Confidence 3458899999997 45566667778887643222211 1 111 112334455688999998 888
Q ss_pred cCC
Q 048393 279 HCG 281 (369)
Q Consensus 279 hgG 281 (369)
|.-
T Consensus 198 ~lP 200 (324)
T 3evt_A 198 ALP 200 (324)
T ss_dssp CCC
T ss_pred cCC
Confidence 864
No 113
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=32.58 E-value=34 Score=28.97 Aligned_cols=32 Identities=19% Similarity=0.054 Sum_probs=22.5
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| ++|+|... --+..=|.++|||+|++.-+.
T Consensus 114 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 147 (241)
T 2xzm_B 114 EPRVLIVTDPRSDFQAIKEASYVNIPVIALCDSD 147 (241)
T ss_dssp CCSEEEESCTTTTHHHHHHHTTTTCCEEECCCSS
T ss_pred CCCEEEEECCCcchHHHHHHHHhCCCEEEEecCC
Confidence 578 45567665 335556889999999976554
No 114
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=32.46 E-value=20 Score=32.51 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=24.6
Q ss_pred HhhcccCcCceeecCChhhHHHHHh----hCCceeec
Q 048393 266 GVLAHEATGCFLTHCGWNSTMEALG----LGVPMLAM 298 (369)
Q Consensus 266 ~iL~~~~~~~~I~hgG~~s~~eal~----~GvP~i~~ 298 (369)
++-..+|+ +|+=||=||++.|.. .++|++++
T Consensus 104 ~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGi 138 (365)
T 3pfn_A 104 DISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAF 138 (365)
T ss_dssp CCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEE
T ss_pred hcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEE
Confidence 34456677 999999999999976 36888876
No 115
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=32.33 E-value=22 Score=31.38 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=24.2
Q ss_pred hhcccCcCceeecCChhhHHHHHhh----CCceeecCC
Q 048393 267 VLAHEATGCFLTHCGWNSTMEALGL----GVPMLAMPQ 300 (369)
Q Consensus 267 iL~~~~~~~~I~hgG~~s~~eal~~----GvP~i~~P~ 300 (369)
....+++ +|+-||=||+.+++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3345666 9999999999999754 899999874
No 116
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=32.20 E-value=42 Score=29.35 Aligned_cols=32 Identities=19% Similarity=0.110 Sum_probs=23.1
Q ss_pred CCCE-EEECCCcc-hHHHHHHHhCCCcEEEcccc
Q 048393 34 DVDC-IVYDSFLP-WALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D~-vI~D~~~~-~~~~~A~~lgiP~v~~~~~~ 65 (369)
.||+ +|+|.... -+..=|.++|||+|.+.-+.
T Consensus 118 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 151 (295)
T 2zkq_b 118 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 151 (295)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEECTT
T ss_pred CCCeEEEeCCCcchhHHHHHHHhCCCEEEEecCC
Confidence 5784 55677663 35556999999999986655
No 117
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=32.01 E-value=1.9e+02 Score=22.95 Aligned_cols=144 Identities=14% Similarity=0.142 Sum_probs=71.2
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeec
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTH 279 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~h 279 (369)
++.|-|-+||.. +....++....|+..+..+-..+-+. ...|+.. ..|+-... -...++ ||.=
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa--HR~p~~~----------~~~~~~a~-~~g~~V--iIa~ 69 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA--HRTPEAM----------FSYARGAA-ARGLEV--IIAG 69 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTCHHHH----------HHHHHHHH-HHTCCE--EEEE
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC--CCCHHHH----------HHHHHHHH-hCCCCE--EEEe
Confidence 345666677764 55677888888888887754333332 2233321 11111000 022334 8877
Q ss_pred CChhhHHHHH---hhCCceeecCCCCChh--HHH-HHHHhh-cCceEE-ecCCCCCCcCHHHHHHHHHHHhcCCcHHHHH
Q 048393 280 CGWNSTMEAL---GLGVPMLAMPQWSDQS--TNA-KYIMDV-GKMGLK-VPADEKGIVRREAIAHCINEILEGERGKEIK 351 (369)
Q Consensus 280 gG~~s~~eal---~~GvP~i~~P~~~dQ~--~na-~~~~~~-~g~g~~-~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 351 (369)
.|...-+-.+ ..-+|+|.+|...-.. ..+ .-+.+. -|+.+. +..+ +..++.-+...|.. +.|+ .++
T Consensus 70 AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~--~~~nAa~lAa~Il~-~~d~---~l~ 143 (174)
T 3lp6_A 70 AGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIG--GAGNAGLLAVRMLG-AANP---QLR 143 (174)
T ss_dssp EESSCCHHHHHHHHCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTT--CHHHHHHHHHHHHH-TTCH---HHH
T ss_pred cCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcC--cchHHHHHHHHHHh-CCCH---HHH
Confidence 6664322222 2568999999753211 111 122222 032121 1211 03445555544432 3666 788
Q ss_pred HHHHHHHHHHHHHHh
Q 048393 352 QNADKWRNFAKEAVA 366 (369)
Q Consensus 352 ~~a~~l~~~~~~~~~ 366 (369)
++.+..+++.++.+.
T Consensus 144 ~kl~~~r~~~~~~v~ 158 (174)
T 3lp6_A 144 ARIVAFQDRLADVVA 158 (174)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 887777777766553
No 118
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=31.19 E-value=2e+02 Score=23.00 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=23.7
Q ss_pred ceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEE
Q 048393 201 SVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVV 236 (369)
Q Consensus 201 ~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~ 236 (369)
|.|-|-+||.. +....++....|+..+..+-..+
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V 47 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITI 47 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEE
Confidence 46777777765 55677788888888887754333
No 119
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=30.78 E-value=85 Score=22.86 Aligned_cols=37 Identities=8% Similarity=0.163 Sum_probs=23.7
Q ss_pred HHHHhcCCCCEEEECCCcc--hHHHHHHHh-------CCCcEEEccc
Q 048393 27 ELVERMNDVDCIVYDSFLP--WALDVAKKF-------GLTGAAFLTQ 64 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 64 (369)
+.++.. +||+||.|...+ .+..+.+.+ .+|.+.++..
T Consensus 41 ~~l~~~-~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 41 EALNAT-PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHS-CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHhcc-CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 344444 799999998763 355655554 4677766543
No 120
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=30.67 E-value=34 Score=32.43 Aligned_cols=36 Identities=22% Similarity=0.183 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 22 LQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 22 ~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
...+++++++. +||++|.... ...+|+++|||++.+
T Consensus 406 ~~el~~~i~~~-~pDL~ig~~~---~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 406 GYEFEEFVKRI-KPDLIGSGIK---EKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHHHH-CCSEEEECHH---HHHHHHHTTCCEEES
T ss_pred HHHHHHHHHhc-CCcEEEeCcc---hhHHHHHcCCCEEec
Confidence 44667777777 8999999744 778999999998853
No 121
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=30.53 E-value=30 Score=30.02 Aligned_cols=71 Identities=10% Similarity=-0.029 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHh----h
Q 048393 216 EQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALG----L 291 (369)
Q Consensus 216 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~----~ 291 (369)
.....+.+.|++.+..+.+..........+ + . .......+-..+++ +|+=||=||+.+++. .
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~-~--------~---~~~~~~~~~~~~D~--vi~~GGDGT~l~a~~~~~~~ 86 (292)
T 2an1_A 21 TTHEMLYRWLCDQGYEVIVEQQIAHELQLK-N--------V---PTGTLAEIGQQADL--AVVVGGDGNMLGAARTLARY 86 (292)
T ss_dssp CHHHHHHHHHHHTTCEEEEEHHHHHHTTCS-S--------C---CEECHHHHHHHCSE--EEECSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHCCCEEEEecchhhhcccc-c--------c---cccchhhcccCCCE--EEEEcCcHHHHHHHHHhhcC
Confidence 346677777887787765432110000000 0 0 01112233345666 999999999999975 3
Q ss_pred CCceeecCC
Q 048393 292 GVPMLAMPQ 300 (369)
Q Consensus 292 GvP~i~~P~ 300 (369)
++|++++|.
T Consensus 87 ~~P~lGI~~ 95 (292)
T 2an1_A 87 DINVIGINR 95 (292)
T ss_dssp SCEEEEBCS
T ss_pred CCCEEEEEC
Confidence 889999983
No 122
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=30.38 E-value=33 Score=32.41 Aligned_cols=36 Identities=11% Similarity=0.058 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 22 LQTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 22 ~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
...+++++++. +||++|.... ...+|+++|||++.+
T Consensus 390 ~~el~~~i~~~-~pDL~ig~~~---~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ARVLLKTVDEY-QADILIAGGR---NMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHHHT-TCSEEECCGG---GHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHhc-CCCEEEECCc---hhHHHHHcCCCEEEe
Confidence 44666777777 9999999754 677899999998753
No 123
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=30.28 E-value=41 Score=28.65 Aligned_cols=32 Identities=19% Similarity=0.096 Sum_probs=22.9
Q ss_pred CCC-EEEECCCc-chHHHHHHHhCCCcEEEcccc
Q 048393 34 DVD-CIVYDSFL-PWALDVAKKFGLTGAAFLTQS 65 (369)
Q Consensus 34 ~~D-~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 65 (369)
.|| +||+|+.. --+..=|.++|||+|++.-+.
T Consensus 117 ~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial~DTn 150 (252)
T 3u5c_A 117 EPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLD 150 (252)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEEEECTT
T ss_pred CCceEEEeCCccchHHHHHHHHcCCCEEEEEcCC
Confidence 578 55677765 335556889999999976654
No 124
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=29.81 E-value=2.6e+02 Score=24.49 Aligned_cols=64 Identities=14% Similarity=0.014 Sum_probs=38.1
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceee
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLT 278 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~ 278 (369)
.+.+-+|.+|.++ ..+++.+...|.+++..-.... .. +++ ..........++++.+|+ ++.
T Consensus 139 g~tvGIiG~G~IG-------~~vA~~l~~~G~~V~~~dr~~~--~~-~~~-------~~~~~~~~l~ell~~aDi--V~l 199 (315)
T 3pp8_A 139 EFSVGIMGAGVLG-------AKVAESLQAWGFPLRCWSRSRK--SW-PGV-------ESYVGREELRAFLNQTRV--LIN 199 (315)
T ss_dssp TCCEEEECCSHHH-------HHHHHHHHTTTCCEEEEESSCC--CC-TTC-------EEEESHHHHHHHHHTCSE--EEE
T ss_pred CCEEEEEeeCHHH-------HHHHHHHHHCCCEEEEEcCCch--hh-hhh-------hhhcccCCHHHHHhhCCE--EEE
Confidence 3458999999997 4566667777888764322221 11 111 011222345578888988 888
Q ss_pred cCC
Q 048393 279 HCG 281 (369)
Q Consensus 279 hgG 281 (369)
|.-
T Consensus 200 ~~P 202 (315)
T 3pp8_A 200 LLP 202 (315)
T ss_dssp CCC
T ss_pred ecC
Confidence 864
No 125
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=29.23 E-value=2.8e+02 Score=24.00 Aligned_cols=51 Identities=20% Similarity=0.200 Sum_probs=30.0
Q ss_pred hhCCceeecCCCCCh----------------hHHHHHHHhhcCc-eEEecCCC-------CC--CcCHHHHHHHHHHH
Q 048393 290 GLGVPMLAMPQWSDQ----------------STNAKYIMDVGKM-GLKVPADE-------KG--IVRREAIAHCINEI 341 (369)
Q Consensus 290 ~~GvP~i~~P~~~dQ----------------~~na~~~~~~~g~-g~~~~~~~-------~~--~~~~~~l~~~i~~~ 341 (369)
.+|+|+++-|.+.=| ..-|+....+ |+ |+.++++. ++ .++.+++.+.++++
T Consensus 193 ~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~-GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i 269 (285)
T 3sz8_A 193 TGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAV-GIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQM 269 (285)
T ss_dssp TTSCCEEEETTTTCC---------------HHHHHHHHHHH-CCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHH
T ss_pred CCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHh-CCCEEEEEeccChhccCCchhhccCHHHHHHHHHHH
Confidence 348999888876522 3345566666 87 67777651 11 34556655555443
No 126
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=29.05 E-value=72 Score=27.78 Aligned_cols=81 Identities=9% Similarity=0.069 Sum_probs=46.9
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCC
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCG 281 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG 281 (369)
.++++--|-.....+.+..+...|.+.+..+.+..... +... ...+ .++....++ +|.-||
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~-----~~~a----------~~~~--~~~~~~~d~--vv~~GG 72 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE-----QGDA----------TKYC--QEFASKVDL--IIVFGG 72 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS-----TTHH----------HHHH--HHHTTTCSE--EEEEEC
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC-----cchH----------HHHH--HHhhcCCCE--EEEEcc
Confidence 45555544433334556777777877777665543221 1110 0011 011223445 999999
Q ss_pred hhhHHHHHh------hCCceeecCCC
Q 048393 282 WNSTMEALG------LGVPMLAMPQW 301 (369)
Q Consensus 282 ~~s~~eal~------~GvP~i~~P~~ 301 (369)
=||+.|++. .++|+.++|..
T Consensus 73 DGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 73 DGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp HHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred chHHHHHHHHHhhCCCCCcEEEecCC
Confidence 999999864 56899999973
No 127
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=29.01 E-value=83 Score=23.55 Aligned_cols=38 Identities=13% Similarity=0.175 Sum_probs=24.2
Q ss_pred HHHHhcCCCCEEEECCCcc--hHHHHHHHh-------CCCcEEEcccc
Q 048393 27 ELVERMNDVDCIVYDSFLP--WALDVAKKF-------GLTGAAFLTQS 65 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 65 (369)
+.+++. +||+||.|...+ -+..+++.+ .+|.+.++...
T Consensus 45 ~~l~~~-~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 45 RFLSLT-RPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHTTC-CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHhC-CCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 344444 899999998763 355555443 57777766544
No 128
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=28.98 E-value=42 Score=33.43 Aligned_cols=89 Identities=11% Similarity=0.084 Sum_probs=55.3
Q ss_pred eccChHHhhcccCcCceeecCChhhHHHHHhhCCceeecCCCCChhHHHHHHHhhcCceEEecCCC--CC--CcCHHHHH
Q 048393 260 NWCPQLGVLAHEATGCFLTHCGWNSTMEALGLGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADE--KG--IVRREAIA 335 (369)
Q Consensus 260 ~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~--~~--~~~~~~l~ 335 (369)
++.+-.++|..+|+ .||-- .+.+.|.+..++|+|....-.|++.+- .. |...+..+ .| .-+.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~r---g~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LR---GFYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CC---SBSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cC---CcccChhHhCCCCeECCHHHHH
Confidence 34455689999999 99986 478899999999999887766665431 12 33322110 00 24678888
Q ss_pred HHHHHHhcCCcHHHHHHHHHHHHHH
Q 048393 336 HCINEILEGERGKEIKQNADKWRNF 360 (369)
Q Consensus 336 ~~i~~~l~~~~~~~~~~~a~~l~~~ 360 (369)
++|.+...+. ..++++.++..++
T Consensus 675 ~~i~~~~~~~--~~~~~~~~~~~~~ 697 (729)
T 3l7i_A 675 KELKNLDKVQ--QQYQEKIDAFYDR 697 (729)
T ss_dssp HHHTTHHHHH--HHTHHHHHHHHHH
T ss_pred HHHhhhhccc--hhHHHHHHHHHHH
Confidence 8887765421 1344444444333
No 129
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=28.92 E-value=1.6e+02 Score=24.42 Aligned_cols=45 Identities=18% Similarity=0.125 Sum_probs=32.1
Q ss_pred hhHHHHHhccCCCCceEEEEeCccccCCHHHHHHHHHHHHhCCCcEE
Q 048393 187 IESCMKWLNDRANGSVVYVSFGSMATLKMEQMEELAWGLKASDKYFL 233 (369)
Q Consensus 187 ~~~~~~~l~~~~~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i 233 (369)
.+.+.+|+.. ...+++|-.++........+..+.++|++.+..+.
T Consensus 21 ~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~ 65 (229)
T 1fy2_A 21 LPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVT 65 (229)
T ss_dssp HHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5667888863 34599998887543344567888899998887654
No 130
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=28.46 E-value=92 Score=22.52 Aligned_cols=37 Identities=14% Similarity=0.114 Sum_probs=24.4
Q ss_pred HHHhcCCCCEEEECCCcc---hHHHHHHHh----CCCcEEEcccc
Q 048393 28 LVERMNDVDCIVYDSFLP---WALDVAKKF----GLTGAAFLTQS 65 (369)
Q Consensus 28 ll~~~~~~D~vI~D~~~~---~~~~~A~~l----giP~v~~~~~~ 65 (369)
.+.+. +||+||.|...+ .+..+.+.+ .+|++.++...
T Consensus 49 ~~~~~-~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 49 CAPDL-RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHH-CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHhC-CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 34444 899999997653 355554443 68888876654
No 131
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=28.05 E-value=83 Score=26.94 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=30.6
Q ss_pred HHHHHHHHhcCCCCEEEECCCcc------hHHHHHHHhCCCcEEEcc
Q 048393 23 QTFTELVERMNDVDCIVYDSFLP------WALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~------~~~~~A~~lgiP~v~~~~ 63 (369)
..+.+++++. +||+|++-.... .+..+|+.||+|.+...+
T Consensus 102 ~~La~~i~~~-~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 102 RILTEVIKKE-APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHH-CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhc-CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 3455566666 799999987652 688899999999998654
No 132
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=27.88 E-value=98 Score=21.69 Aligned_cols=39 Identities=23% Similarity=0.277 Sum_probs=25.3
Q ss_pred HHHHHhcCCCCEEEECCCcc--hHHHHHHHh----CCCcEEEcccc
Q 048393 26 TELVERMNDVDCIVYDSFLP--WALDVAKKF----GLTGAAFLTQS 65 (369)
Q Consensus 26 ~~ll~~~~~~D~vI~D~~~~--~~~~~A~~l----giP~v~~~~~~ 65 (369)
.+++... +||+||.|...+ -+..+.+.+ .+|.+.++...
T Consensus 39 ~~~~~~~-~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 39 REIMQNQ-SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp HHHHHHS-CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHhcC-CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 3444454 799999998763 356666655 46777665544
No 133
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=27.86 E-value=1.1e+02 Score=21.41 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=24.2
Q ss_pred HHHhcCCCCEEEECCCcc--hHHHHHHHh-----CCCcEEEcccc
Q 048393 28 LVERMNDVDCIVYDSFLP--WALDVAKKF-----GLTGAAFLTQS 65 (369)
Q Consensus 28 ll~~~~~~D~vI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 65 (369)
.+... +||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 42 ~~~~~-~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 42 KYKEL-KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp HHHHH-CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred HHHhc-CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 33444 799999998763 355555544 57877766554
No 134
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=27.60 E-value=53 Score=30.71 Aligned_cols=35 Identities=11% Similarity=0.233 Sum_probs=27.9
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 23 QTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
..+++++++. ++|++|.+.. ...+|+++|||++.+
T Consensus 375 ~~l~~~i~~~-~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 375 FDVHQWIKNE-GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHHS-CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHHhc-CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 3466677777 8999998865 677899999999874
No 135
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=27.28 E-value=1.2e+02 Score=21.60 Aligned_cols=37 Identities=8% Similarity=-0.011 Sum_probs=22.6
Q ss_pred HHHHhcCCCCEEEECCCcc--hHHHHHHHh-------CCCcEEEccc
Q 048393 27 ELVERMNDVDCIVYDSFLP--WALDVAKKF-------GLTGAAFLTQ 64 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 64 (369)
+.+++. +||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 41 ~~l~~~-~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 41 QQALAH-PPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHHS-CCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHHhcC-CCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 344444 899999998763 344444332 5677766543
No 136
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=27.25 E-value=89 Score=27.76 Aligned_cols=72 Identities=8% Similarity=0.036 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHh--h
Q 048393 214 KMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALG--L 291 (369)
Q Consensus 214 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~--~ 291 (369)
+.+..+.+.+++.+..++.||.+.++... .++.++++...+-++|+. ||-+...-++.-+++ .
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al~~~~ 127 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYNS-------------NGLLKYLDYDLIRENPKF--FCGYSDITALNNAIYTKT 127 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG-------------GGGGGGCCHHHHHTSCCE--EEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH-------------HHHHhhcChhHHHhCCeE--EEEecchHHHHHHHHHhh
Confidence 44568889999999999999987765321 123344444444455655 777766666666665 4
Q ss_pred CCceeecCC
Q 048393 292 GVPMLAMPQ 300 (369)
Q Consensus 292 GvP~i~~P~ 300 (369)
|+..+.=|+
T Consensus 128 G~~t~hGp~ 136 (331)
T 4e5s_A 128 GLVTYSGPH 136 (331)
T ss_dssp CBCEEECCC
T ss_pred CCcEEEccc
Confidence 666655444
No 137
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=26.84 E-value=57 Score=31.56 Aligned_cols=27 Identities=22% Similarity=0.281 Sum_probs=22.2
Q ss_pred cCceeecCC------hhhHHHHHhhCCceeecC
Q 048393 273 TGCFLTHCG------WNSTMEALGLGVPMLAMP 299 (369)
Q Consensus 273 ~~~~I~hgG------~~s~~eal~~GvP~i~~P 299 (369)
.+++++|.| .+.+.||-+.++|+|++-
T Consensus 69 ~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 69 LGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 445999998 458899999999999863
No 138
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=26.75 E-value=91 Score=26.55 Aligned_cols=40 Identities=15% Similarity=0.159 Sum_probs=30.1
Q ss_pred HHHHHHHHhcCCCCEEEECCCcc------hHHHHHHHhCCCcEEEcc
Q 048393 23 QTFTELVERMNDVDCIVYDSFLP------WALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~------~~~~~A~~lgiP~v~~~~ 63 (369)
..+.+++++. +||+|++-.... .+..+|+.||+|.+...+
T Consensus 106 ~~La~~i~~~-~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 106 RVLAKLAEKE-KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHH-TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhc-CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 3445556665 799999977652 588899999999998654
No 139
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=26.68 E-value=1.4e+02 Score=20.54 Aligned_cols=37 Identities=16% Similarity=0.132 Sum_probs=23.5
Q ss_pred HHHHhcCCCCEEEECCCcc--hHHHHHHHh-----CCCcEEEccc
Q 048393 27 ELVERMNDVDCIVYDSFLP--WALDVAKKF-----GLTGAAFLTQ 64 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 64 (369)
+.+... +||+||.|...+ .+..+.+.+ .+|.+.++..
T Consensus 39 ~~~~~~-~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 39 KKFFSG-NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHS-CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHhcC-CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 344444 899999998763 355555444 4677766544
No 140
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=26.67 E-value=80 Score=30.13 Aligned_cols=36 Identities=14% Similarity=0.105 Sum_probs=27.7
Q ss_pred HHHHHHHHHhcCCCCEEEECCCcchHHHHHHHh-------CCCcEEE
Q 048393 22 LQTFTELVERMNDVDCIVYDSFLPWALDVAKKF-------GLTGAAF 61 (369)
Q Consensus 22 ~~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~l-------giP~v~~ 61 (369)
...+++++++. ++|++|.... +..+|+++ |||++.+
T Consensus 427 ~~~l~~~i~~~-~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 427 LWHLRSLVFTD-KPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHHHT-CCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHHHhc-CCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 34666777777 8999999976 55677777 9998874
No 141
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=26.62 E-value=1.1e+02 Score=22.13 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=24.1
Q ss_pred HHHHhcCCCCEEEECCCcc--hHHHHHHHh-------CCCcEEEcccc
Q 048393 27 ELVERMNDVDCIVYDSFLP--WALDVAKKF-------GLTGAAFLTQS 65 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 65 (369)
+.+++. +||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 44 ~~l~~~-~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 44 EQVARR-PYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHHS-CCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHHhC-CCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 344455 899999998763 355555443 46777665543
No 142
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=26.54 E-value=1.6e+02 Score=21.20 Aligned_cols=49 Identities=8% Similarity=0.014 Sum_probs=28.7
Q ss_pred hCCceeecCCCCChhHHHHHHHhhcCc-eEEecCCCCCCcCHHHHHHHHHHHhcCC
Q 048393 291 LGVPMLAMPQWSDQSTNAKYIMDVGKM-GLKVPADEKGIVRREAIAHCINEILEGE 345 (369)
Q Consensus 291 ~GvP~i~~P~~~dQ~~na~~~~~~~g~-g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 345 (369)
...|+|++--..+...-...+... |+ +...+ .++.++|..+|++++...
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~K-----P~~~~~L~~~i~~~~~~~ 120 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDA-GIHQFLTK-----PWHPEQLLSSARNAARMF 120 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHT-TCCEEEES-----SCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhh-chhhhccC-----CCCHHHHHHHHHHHHHHH
Confidence 356777664444433333333333 44 44444 479999999999888543
No 143
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=26.18 E-value=43 Score=31.84 Aligned_cols=35 Identities=11% Similarity=0.247 Sum_probs=28.2
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 23 QTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
..+++++++. +||++|.+.. ...+|+++|||++.+
T Consensus 362 ~el~~~i~~~-~pDl~ig~~~---~r~~a~k~gip~~~i 396 (511)
T 2xdq_B 362 TVVGDAIARV-EPAAIFGTQM---ERHVGKRLNIPCGVI 396 (511)
T ss_dssp HHHHHHHHHH-CCSEEEECHH---HHHHHHHHTCCEEEC
T ss_pred HHHHHHHHhc-CCCEEEeccc---hHHHHHhcCCCeEec
Confidence 3667777777 8999998844 778899999998874
No 144
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=25.98 E-value=82 Score=26.68 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=27.7
Q ss_pred HHHHHHHHhcC-CCCEEEECCCc-------chHHHHHHHhCCCcEEE
Q 048393 23 QTFTELVERMN-DVDCIVYDSFL-------PWALDVAKKFGLTGAAF 61 (369)
Q Consensus 23 ~~l~~ll~~~~-~~D~vI~D~~~-------~~~~~~A~~lgiP~v~~ 61 (369)
+.+.++++.+. +||++++|-.. --|..+.-.+++|+|.+
T Consensus 97 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 97 PLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 45556666655 89999999763 22555677778998885
No 145
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=25.97 E-value=1e+02 Score=22.90 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=24.7
Q ss_pred HHHHhcCCCCEEEECCCcc--hHHHHHHHh-----CCCcEEEcccc
Q 048393 27 ELVERMNDVDCIVYDSFLP--WALDVAKKF-----GLTGAAFLTQS 65 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 65 (369)
+.+++. +||+||.|.... .+..+.+.+ .+|++.++...
T Consensus 52 ~~l~~~-~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 52 QLLASR-EVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHS-CCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHcC-CCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 344455 899999998763 355555443 57877766544
No 146
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=25.54 E-value=60 Score=28.01 Aligned_cols=129 Identities=10% Similarity=0.059 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEec-cC--hHHhh-cccCcCceeecCChhhHHHHH
Q 048393 214 KMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNW-CP--QLGVL-AHEATGCFLTHCGWNSTMEAL 289 (369)
Q Consensus 214 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p--~~~iL-~~~~~~~~I~hgG~~s~~eal 289 (369)
....+..+++.+.+.+..++.-.+.... +. . .+ .| -..++ .+|+++++|.|||.....+++
T Consensus 136 ~d~~~~~~~~~a~e~glpv~iH~~~~~~---~~-~-----------~~~~p~~~~~v~~~~P~l~ivl~H~G~~~~~~~~ 200 (291)
T 3irs_A 136 DDRRLYPLYAFCEDNGIPVIMMTGGNAG---PD-I-----------TYTNPEHIDRVLGDFPDLTVVSSHGNWPWVQEII 200 (291)
T ss_dssp TCGGGHHHHHHHHHTTCCEEEECSSSCS---SS-G-----------GGGCHHHHHHHHHHCTTCCEEEEGGGTTCHHHHH
T ss_pred CCHHHHHHHHHHHHcCCeEEEeCCCCCC---CC-C-----------ccCCHHHHHHHHHHCCCCEEEeecCCcccHHHHH
Confidence 4456777778888888777755543210 00 0 01 11 12344 478999999999998887776
Q ss_pred hh--CCceeecCCC---CChh---HHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHH-hcCCcH-HHHHHHHHHHH
Q 048393 290 GL--GVPMLAMPQW---SDQS---TNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEI-LEGERG-KEIKQNADKWR 358 (369)
Q Consensus 290 ~~--GvP~i~~P~~---~dQ~---~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~-l~~~~~-~~~~~~a~~l~ 358 (369)
.. ..|-+.+-.. ...+ .-.+.++.. |.-..+-..+-.-.+.....+.+.++ ++.++. +.+.+||+++=
T Consensus 201 ~l~~~~~nvy~~~Sg~~~~~~~~~~~~~~~~~~-g~drllfgSD~P~~~~~~~~~~~~~l~l~~e~~~~i~~~NA~rl~ 278 (291)
T 3irs_A 201 HVAFRRPNLYLSPDMYLYNLPGHADFIQAANSF-LADRMLFGTAYPMCPLKEYTEWFLTLPIKPDAMEKILHGNAERLL 278 (291)
T ss_dssp HHHHHCTTEEEECGGGGSSSTTHHHHHHHHTTG-GGGTBCCCCCBTSSCHHHHHHHHHTSSCCHHHHHHHHTHHHHHHH
T ss_pred HHHhHCCCeEecHHHHhccCCCHHHHHHHHHHh-CcceEEEecCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHh
Confidence 63 2333333221 1111 112234444 65544433311234455555556554 222222 45666776653
No 147
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=25.30 E-value=71 Score=28.42 Aligned_cols=101 Identities=14% Similarity=0.109 Sum_probs=62.2
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeec
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTH 279 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~h 279 (369)
+.+-.+.+|.++ +++++.+...+.+++.. .... .+.... . ...+++..++|+.+|+ ++-|
T Consensus 142 ~tvGIiG~G~IG-------~~va~~~~~fg~~v~~~-d~~~----~~~~~~---~---~~~~~~l~ell~~sDi--vslh 201 (334)
T 3kb6_A 142 LTLGVIGTGRIG-------SRVAMYGLAFGMKVLCY-DVVK----REDLKE---K---GCVYTSLDELLKESDV--ISLH 201 (334)
T ss_dssp SEEEEECCSHHH-------HHHHHHHHHTTCEEEEE-CSSC----CHHHHH---T---TCEECCHHHHHHHCSE--EEEC
T ss_pred cEEEEECcchHH-------HHHHHhhcccCceeeec-CCcc----chhhhh---c---CceecCHHHHHhhCCE--EEEc
Confidence 447788899887 45556666678887643 2111 111100 1 1235667899999998 8877
Q ss_pred CChhhHHHHHhhCCceeecCCC--CChhHHHHHHHhhcCce-EEecCCCCCCcCHHHHHHHHH
Q 048393 280 CGWNSTMEALGLGVPMLAMPQW--SDQSTNAKYIMDVGKMG-LKVPADEKGIVRREAIAHCIN 339 (369)
Q Consensus 280 gG~~s~~eal~~GvP~i~~P~~--~dQ~~na~~~~~~~g~g-~~~~~~~~~~~~~~~l~~~i~ 339 (369)
+ |+. .....|++.+... .-| +.++....+-++.+.|.++++
T Consensus 202 ~------------------Plt~~T~~li~~~~l~~m-k~~a~lIN~aRG~iVde~aL~~aL~ 245 (334)
T 3kb6_A 202 V------------------PYTKETHHMINEERISLM-KDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp C------------------CCCTTTTTCBCHHHHHHS-CTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred C------------------CCChhhccCcCHHHHhhc-CCCeEEEecCccccccHHHHHHHHH
Confidence 5 554 3456688888777 554 445544223677788888776
No 148
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=25.25 E-value=90 Score=26.49 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=29.4
Q ss_pred HHHHHHHhcCCCCEEEECCCcc------hHHHHHHHhCCCcEEEcc
Q 048393 24 TFTELVERMNDVDCIVYDSFLP------WALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~------~~~~~A~~lgiP~v~~~~ 63 (369)
.+.+++++. +||+|++-.... .+..+|+.||+|.+...+
T Consensus 104 ~La~~i~~~-~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 104 ILAAVARAE-GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHH-TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHhc-CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 444555555 799999976552 688899999999998644
No 149
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=25.02 E-value=1.3e+02 Score=28.86 Aligned_cols=76 Identities=13% Similarity=-0.016 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCc-cCCCCcchhcccCCCcEEEeccC-hH---------HhhcccCcCceeecCChh--
Q 048393 217 QMEELAWGLKASDKYFLWVVRESE-QSKLPENFSDETSQKGLVVNWCP-QL---------GVLAHEATGCFLTHCGWN-- 283 (369)
Q Consensus 217 ~~~~~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p-~~---------~iL~~~~~~~~I~hgG~~-- 283 (369)
..+.+++.|.+.|++.++.+.+.. ...+-+.+. + +..+.-.. +. .+-..+.+ +++|.|.|
T Consensus 14 ~a~~l~~~L~~~GV~~vfg~PG~~~~~~l~~al~----~-i~~i~~~~E~~Aa~~A~Gyar~tg~p~v--~~~TsGpG~~ 86 (573)
T 2iht_A 14 AAHALLSRLRDHGVGKVFGVVGREAASILFDEVE----G-IDFVLTRHEFTAGVAADVLARITGRPQA--CWATLGPGMT 86 (573)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGGTCCSCSST----T-CEEEECSSHHHHHHHHHHHHHHHCSCEE--EEECTTHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEecCCcchhHHHHHHc----C-CeEEeeCCHHHHHHHHHHHHHHHCCCEE--EEEccCchHH
Confidence 456778888888888888776654 444443332 1 33332111 11 12233444 99999987
Q ss_pred ----hHHHHHhhCCceeecC
Q 048393 284 ----STMEALGLGVPMLAMP 299 (369)
Q Consensus 284 ----s~~eal~~GvP~i~~P 299 (369)
.+.||-+.++|+|++-
T Consensus 87 N~~~~v~~A~~~~~Pll~it 106 (573)
T 2iht_A 87 NLSTGIATSVLDRSPVIALA 106 (573)
T ss_dssp HHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHhhCCCEEEEc
Confidence 5789999999999863
No 150
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=25.00 E-value=68 Score=28.50 Aligned_cols=38 Identities=13% Similarity=0.151 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCCCCEEEECCCcc-hHHHHHHHhCCCcEEEc
Q 048393 23 QTFTELVERMNDVDCIVYDSFLP-WALDVAKKFGLTGAAFL 62 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~v~~~ 62 (369)
+.++.+++- +||+||...... -...+.+.+|||++.+.
T Consensus 87 ~n~E~Ilal--~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 87 PDLESLITL--QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CCHHHHHHH--CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CCHHHHhcC--CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 456666644 899999875432 22345678899999874
No 151
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=24.99 E-value=2e+02 Score=23.02 Aligned_cols=55 Identities=15% Similarity=0.069 Sum_probs=40.1
Q ss_pred hhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 048393 304 QSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAK 362 (369)
Q Consensus 304 Q~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 362 (369)
+..|+.+-++. |.-.++-.. ..+.++|.+++++=|.|..-.+.+..+.++.+..+
T Consensus 117 ~~LN~~Ye~kF-GfpFVi~v~---G~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa~ 171 (181)
T 2q37_A 117 AEWNVLYKKKF-GFIFIICAS---GRTHAEMLHALKERYENRPIVELEIAAMEQMKITE 171 (181)
T ss_dssp HHHHHHHHHHH-SSCCCCCCS---SCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCeEEEEeC---CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 56799999999 888777655 56889999999877777533456666666665544
No 152
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=24.76 E-value=1.2e+02 Score=22.22 Aligned_cols=30 Identities=23% Similarity=0.199 Sum_probs=20.0
Q ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHhC
Q 048393 199 NGSVVYVSFGSMATLKMEQMEELAWGLKAS 228 (369)
Q Consensus 199 ~~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~ 228 (369)
+..+|+++.||........+.++...+++.
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~ 34 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVES 34 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhh
Confidence 356999999997532334567777777643
No 153
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=24.74 E-value=53 Score=31.38 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEE
Q 048393 23 QTFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAF 61 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 61 (369)
..+++++++. ++|++|.+.. ...+|+++|||++.+
T Consensus 339 ~el~~~i~~~-~pDL~ig~~~---~~~~a~~~giP~~~i 373 (525)
T 3aek_B 339 LEVEKAIEAA-APELILGTQM---ERNIAKKLGLPCAVI 373 (525)
T ss_dssp HHHHHHHHHH-CCSEEEECHH---HHHHHHHHTCCEEEC
T ss_pred HHHHHHHhhc-CCCEEEecch---hHHHHHHcCCCEEEe
Confidence 3566677777 8999998853 778899999998863
No 154
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.51 E-value=44 Score=27.96 Aligned_cols=27 Identities=22% Similarity=0.405 Sum_probs=23.9
Q ss_pred CCCEEEECCCcchHHHHHHHhCCCcEEEcc
Q 048393 34 DVDCIVYDSFLPWALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 34 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 63 (369)
++|+||.|.. +..+|+++|+|.+.+.+
T Consensus 154 G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 154 GTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp TCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred CCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 8999999955 78899999999999774
No 155
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=24.47 E-value=65 Score=28.39 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=25.2
Q ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHhCCCcEEEccc
Q 048393 24 TFTELVERMNDVDCIVYDSFLPWALDVAKKFGLTGAAFLTQ 64 (369)
Q Consensus 24 ~l~~ll~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 64 (369)
.++.+++- +||+||......-...--++.|||++.+...
T Consensus 108 n~E~i~al--~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 108 NTEACVAA--TPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp CHHHHHHT--CCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred CHHHHHhc--CCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 45555543 8999998754322333446679999987543
No 156
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=23.23 E-value=90 Score=22.15 Aligned_cols=36 Identities=17% Similarity=0.095 Sum_probs=21.8
Q ss_pred HHHHhcCCCCEEEECCCc--chHHHHHHHh-------CCCcEEEcc
Q 048393 27 ELVERMNDVDCIVYDSFL--PWALDVAKKF-------GLTGAAFLT 63 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~--~~~~~~A~~l-------giP~v~~~~ 63 (369)
+.+++. +||+||.|... .-+..+.+.+ ++|.+.++.
T Consensus 41 ~~l~~~-~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 85 (127)
T 3i42_A 41 HAMSTR-GYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSG 85 (127)
T ss_dssp HHHHHS-CCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEEC
T ss_pred HHHHhc-CCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEEC
Confidence 344455 89999999875 3355554443 356555543
No 157
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=23.13 E-value=71 Score=30.86 Aligned_cols=26 Identities=27% Similarity=0.386 Sum_probs=21.7
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.||-+.++|+|++-
T Consensus 77 ~v~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 77 GICIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp EEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 3389999987 6789999999999874
No 158
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=22.83 E-value=73 Score=30.62 Aligned_cols=28 Identities=21% Similarity=0.228 Sum_probs=23.1
Q ss_pred ccCcCceeecCCh------hhHHHHHhhCCceeecC
Q 048393 270 HEATGCFLTHCGW------NSTMEALGLGVPMLAMP 299 (369)
Q Consensus 270 ~~~~~~~I~hgG~------~s~~eal~~GvP~i~~P 299 (369)
.+.+ +++|.|. +.+.||-+.++|+|++-
T Consensus 73 ~p~v--~~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 73 KAGV--ALVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp SCEE--EEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCEE--EEEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 3444 9999998 58899999999999864
No 159
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=22.82 E-value=1.3e+02 Score=21.10 Aligned_cols=47 Identities=9% Similarity=0.082 Sum_probs=32.7
Q ss_pred hCCceeecCCCCChhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcC
Q 048393 291 LGVPMLAMPQWSDQSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEG 344 (369)
Q Consensus 291 ~GvP~i~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 344 (369)
..+|+|++ ..+.........+. |+--.+.+ .++.++|..+|++++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~~-g~~~~l~k----p~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLKA-HADEYVAK----PVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHSTT-CCSEEEES----SCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHHh-CcchheeC----CCCHHHHHHHHHHHHcC
Confidence 47898888 44444555566666 76445554 47999999999988764
No 160
>2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural GENO PSI-2, protein structure initiative; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1
Probab=22.75 E-value=2.4e+02 Score=22.05 Aligned_cols=55 Identities=11% Similarity=0.190 Sum_probs=39.8
Q ss_pred hhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 048393 304 QSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAK 362 (369)
Q Consensus 304 Q~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 362 (369)
+..|+.+-++. |.-.++-.. ..+.++|.+++++=|.|..-.+.+..+.++.+..+
T Consensus 101 ~~lN~~Ye~kF-GfpFvi~v~---g~~~~~Il~~l~~Rl~nd~~~E~~~a~~e~~kIa~ 155 (165)
T 2o8i_A 101 TQLNSAYTEKF-GFPFIIAVK---GLNRHDILSAFDTRIDNNAAQEFATATGQVEKIAW 155 (165)
T ss_dssp HHHHHHHHHHH-SSCCCCCCT---TCCHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCeeEeeeC---CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 45699999999 888777655 56889999888877776533456666666665554
No 161
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=22.41 E-value=1.3e+02 Score=26.60 Aligned_cols=62 Identities=6% Similarity=-0.032 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHh
Q 048393 214 KMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALG 290 (369)
Q Consensus 214 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~ 290 (369)
+.+..+.+.++|.+..++.||...++... .++.++++...+-++|+. ||-....-++.-+++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-------------~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al~ 124 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFNS-------------NQLLPYLDYDLISENPKI--LCGFSDITALATAIY 124 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG-------------GGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchhH-------------HHHhhhcchhhhccCCeE--EEecccccHHHHHHH
Confidence 44568889999999999999987665211 123334444444445544 555555555555543
No 162
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=21.96 E-value=55 Score=27.04 Aligned_cols=30 Identities=13% Similarity=0.065 Sum_probs=23.7
Q ss_pred CCCEEEECCCcchHHHHHHHhCCCcEEEcc
Q 048393 34 DVDCIVYDSFLPWALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 34 ~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 63 (369)
.+-+||+|.....+...|+++|||+..+.+
T Consensus 31 eI~~Visn~~~a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 31 EVALLITDKPGAKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp EEEEEEESCSSSHHHHHHHTTTCCEEECCG
T ss_pred EEEEEEECCCCcHHHHHHHHcCCCEEEeCh
Confidence 456899986655678899999999987644
No 163
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=21.83 E-value=1.3e+02 Score=26.80 Aligned_cols=72 Identities=10% Similarity=0.079 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCChhhHHHHHh--h
Q 048393 214 KMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCGWNSTMEALG--L 291 (369)
Q Consensus 214 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG~~s~~eal~--~ 291 (369)
+.+..+.+.+++.+..++.||.+.++... .++.++++...+-++|+. ||-+...-++.-+++ .
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al~~~~ 128 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMNS-------------NSLLPYIDYDAFQNNPKI--MIGYSDATALLLGIYAKT 128 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG-------------GGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH-------------HHHhhhcChhHHhhCCeE--EEEechHHHHHHHHHHhc
Confidence 44568889999998899999987765321 123344444444455655 776666666666665 4
Q ss_pred CCceeecCC
Q 048393 292 GVPMLAMPQ 300 (369)
Q Consensus 292 GvP~i~~P~ 300 (369)
|+..+.=|+
T Consensus 129 G~~t~hGp~ 137 (336)
T 3sr3_A 129 GIPTFYGPA 137 (336)
T ss_dssp CCCEEECCC
T ss_pred CceEEECCh
Confidence 666665554
No 164
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=21.60 E-value=1.3e+02 Score=21.88 Aligned_cols=30 Identities=7% Similarity=0.118 Sum_probs=19.9
Q ss_pred CCCEEEECCCcc--hHHHHHHHh-----CCCcEEEcc
Q 048393 34 DVDCIVYDSFLP--WALDVAKKF-----GLTGAAFLT 63 (369)
Q Consensus 34 ~~D~vI~D~~~~--~~~~~A~~l-----giP~v~~~~ 63 (369)
+||+||.|...+ .+..+++.+ .+|.+.++.
T Consensus 49 ~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 49 PPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 799999998763 355555544 466666544
No 165
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=21.16 E-value=81 Score=26.39 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=25.0
Q ss_pred HHHHHHHHhcCCCCEEEECCCc-chHHHHHHHhCCCcEEEcc
Q 048393 23 QTFTELVERMNDVDCIVYDSFL-PWALDVAKKFGLTGAAFLT 63 (369)
Q Consensus 23 ~~l~~ll~~~~~~D~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 63 (369)
+.++.+++ + +||+||..... .-....-++.|||++.+..
T Consensus 51 ~n~E~i~~-l-~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 51 PNVEAVKK-L-KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp CCHHHHHH-T-CCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred CCHHHHHh-c-CCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 35566554 4 89999986433 2233445677999988754
No 166
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.05 E-value=1.4e+02 Score=21.54 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=23.9
Q ss_pred HHHHhcCCCCEEEECCCcc--hHHHHHHHh-----CCCcEEEcccc
Q 048393 27 ELVERMNDVDCIVYDSFLP--WALDVAKKF-----GLTGAAFLTQS 65 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 65 (369)
+.+... +||+||.|...+ .+..+.+.+ .+|.+.++...
T Consensus 42 ~~l~~~-~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 42 QFIERS-KPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp HHHHHH-CCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHhc-CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 334444 899999998763 355555554 46666665543
No 167
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=20.96 E-value=2.7e+02 Score=22.43 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=40.8
Q ss_pred hhHHHHHHHhhcCceEEecCCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 048393 304 QSTNAKYIMDVGKMGLKVPADEKGIVRREAIAHCINEILEGERGKEIKQNADKWRNFAK 362 (369)
Q Consensus 304 Q~~na~~~~~~~g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 362 (369)
+..|+++-++. |.-.++-.. ..+.++|.+++++=|.|+.-.+.+..+.++.+..+
T Consensus 126 ~~LN~~Ye~kF-GfpFVi~v~---G~s~~~IL~~l~~Rl~nd~e~E~~~Al~Ev~kIa~ 180 (189)
T 3o7i_A 126 REGNARYEARF-GRVFLIRAK---GRSGEEILQALTRRLQHTADEEVAEALAQLREITM 180 (189)
T ss_dssp HHHHHHHHHHH-SSCCCCCCT---TCCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCceEEecC---CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 56799999999 888777655 45899999999877777533456666666666554
No 168
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=20.93 E-value=1.8e+02 Score=19.78 Aligned_cols=38 Identities=13% Similarity=0.088 Sum_probs=22.8
Q ss_pred HHHHhcCCCCEEEECCCcc--hHHHHHHHh-------CCCcEEEcccc
Q 048393 27 ELVERMNDVDCIVYDSFLP--WALDVAKKF-------GLTGAAFLTQS 65 (369)
Q Consensus 27 ~ll~~~~~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 65 (369)
+.+.+. +||+||.|.... .+..+.+.+ ++|.+.++...
T Consensus 39 ~~l~~~-~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~ 85 (119)
T 2j48_A 39 DQLDLL-QPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEP 85 (119)
T ss_dssp HHHHHH-CCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSC
T ss_pred HHHHhc-CCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCC
Confidence 344444 899999997653 344444432 56777765443
No 169
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=20.67 E-value=81 Score=31.18 Aligned_cols=26 Identities=27% Similarity=0.519 Sum_probs=22.0
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
+++++|.|.| .+.||-+.++|+|++-
T Consensus 147 gvv~~TsGpG~~N~~~gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 147 GVVLVTSGPGATNVVTPMADAFADGIPMVVFT 178 (677)
T ss_dssp EEEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEECCChHHHHHHHHHHHHHHcCCCEEEEe
Confidence 3499999985 7889999999999874
No 170
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=20.21 E-value=2.5e+02 Score=25.00 Aligned_cols=62 Identities=13% Similarity=0.040 Sum_probs=38.9
Q ss_pred CceEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeec
Q 048393 200 GSVVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTH 279 (369)
Q Consensus 200 ~~~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~h 279 (369)
+.+.+|.+|.++ ..++..+...+.+++..-.... . .. +.. ..++...++++.+|+ ++.|
T Consensus 149 ktvgIiGlG~IG-------~~vA~~l~~~G~~V~~~d~~~~-~----~~-----~~~--~~~~~l~ell~~aDv--V~l~ 207 (343)
T 2yq5_A 149 LTVGLIGVGHIG-------SAVAEIFSAMGAKVIAYDVAYN-P----EF-----EPF--LTYTDFDTVLKEADI--VSLH 207 (343)
T ss_dssp SEEEEECCSHHH-------HHHHHHHHHTTCEEEEECSSCC-G----GG-----TTT--CEECCHHHHHHHCSE--EEEC
T ss_pred CeEEEEecCHHH-------HHHHHHHhhCCCEEEEECCChh-h----hh-----hcc--ccccCHHHHHhcCCE--EEEc
Confidence 448899999997 4556666677888664322211 1 10 111 234466789999999 8888
Q ss_pred CCh
Q 048393 280 CGW 282 (369)
Q Consensus 280 gG~ 282 (369)
.-.
T Consensus 208 ~Pl 210 (343)
T 2yq5_A 208 TPL 210 (343)
T ss_dssp CCC
T ss_pred CCC
Confidence 763
No 171
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=20.09 E-value=1.4e+02 Score=26.20 Aligned_cols=79 Identities=11% Similarity=-0.057 Sum_probs=46.3
Q ss_pred eEEEEeCccccCCHHHHHHHHHHHHhCCCcEEEEEeCCccCCCCcchhcccCCCcEEEeccChHHhhcccCcCceeecCC
Q 048393 202 VVYVSFGSMATLKMEQMEELAWGLKASDKYFLWVVRESEQSKLPENFSDETSQKGLVVNWCPQLGVLAHEATGCFLTHCG 281 (369)
Q Consensus 202 ~i~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~iL~~~~~~~~I~hgG 281 (369)
.|+++..|-.. +..+.+...|.+.+..+.+..... +... .... ...+....++ +|.-||
T Consensus 33 ~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~-----~~~~----------~~~~-~~~~~~~~d~--vvv~GG 91 (332)
T 2bon_A 33 LLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE-----KGDA----------ARYV-EEARKFGVAT--VIAGGG 91 (332)
T ss_dssp EEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS-----TTHH----------HHHH-HHHHHHTCSE--EEEEES
T ss_pred EEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC-----cchH----------HHHH-HHHHhcCCCE--EEEEcc
Confidence 45555444322 456778888888887765543221 0000 0011 1122234555 999999
Q ss_pred hhhHHHHHh--------hCCceeecCCC
Q 048393 282 WNSTMEALG--------LGVPMLAMPQW 301 (369)
Q Consensus 282 ~~s~~eal~--------~GvP~i~~P~~ 301 (369)
=||+.|++. .++|+.++|..
T Consensus 92 DGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 92 DGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred chHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 999999853 57798899973
No 172
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=20.03 E-value=85 Score=30.24 Aligned_cols=26 Identities=19% Similarity=0.258 Sum_probs=22.2
Q ss_pred CceeecCChh------hHHHHHhhCCceeecC
Q 048393 274 GCFLTHCGWN------STMEALGLGVPMLAMP 299 (369)
Q Consensus 274 ~~~I~hgG~~------s~~eal~~GvP~i~~P 299 (369)
++++++.|.| .+.||-+.++|+|++-
T Consensus 76 gv~~~TsGpG~~N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 76 VVLLCTSGTAAANYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp EEEEECSSHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCchhhhhhhHHHHHHHhcCCCeEEEe
Confidence 3499999987 6889999999999874
Done!