BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048394
(485 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 285/488 (58%), Positives = 362/488 (74%), Gaps = 11/488 (2%)
Query: 2 MIRNQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVT 61
M +N RLI T S RQ ST V + +P +KLY +LSALGATGGSV+
Sbjct: 1 MKKNPCRLILTASCPSRQRFSTAEAAVPPAVVSPR-----QSEKLYHKLSALGATGGSVS 55
Query: 62 GALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLT 121
LN +IMEGKT+ K L C+R LRK+ R+ HA E++EWME RKM+FSY D A+ LDL
Sbjct: 56 RTLNEHIMEGKTITKIELSRCIRELRKYRRFDHAFEIMEWMEKRKMNFSYADRAIRLDLI 115
Query: 122 AKTNGIAAAEKYFNGLSEYAKNRYT-YGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
K GIAAAE YFNGLS AKN +T YGALLNCYCKELM+++ALALF++MDE KFL +++
Sbjct: 116 GKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDKALALFQEMDEKKFLYSSL 175
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
FNNL +MY+RLGQPEKV PLV++MK+R +S + TY +WMQSY LND GV+RV E+
Sbjct: 176 PFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQSYGCLNDFQGVDRVLREI 235
Query: 241 CNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTS 298
N+ +D +WTTYSNLA+IY+KA +FEKAE ALKKLE M R+R+AYHFLIS+Y T
Sbjct: 236 VNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKKLEAIMGFRNREAYHFLISIYAGTG 295
Query: 299 NLDAVNRVWGILKSTFPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
N + VNRVWG+LKS+F N SYLV+LQALAKL ++ + +CF EWES C++YDMR+A+
Sbjct: 296 NSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAKCFREWESGCTNYDMRIAN 355
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAAL 417
V IR +LQ DMYEEA LIF++A KR FFK+RE FM+++L+ QLDLAL M AA
Sbjct: 356 VAIRVFLQHDMYEEAELIFDDALKRTRGP--FFKARERFMLFFLKIHQLDLALKHMRAAF 413
Query: 418 SEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAG 477
SE+++ W+P+Q TV+ +F +F EKDVDGAE+ K+LK +NCL+ S YSLL+KTYIAAG
Sbjct: 414 SESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKILKHINCLNSSVYSLLLKTYIAAG 473
Query: 478 KLASDMRQ 485
KLA +MRQ
Sbjct: 474 KLAPEMRQ 481
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/487 (55%), Positives = 350/487 (71%), Gaps = 4/487 (0%)
Query: 1 MMIRNQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSV 60
MM RN +RLIS G+ L R+LC+ T + +A + + +LY RLSALGATGGSV
Sbjct: 1 MMARNPNRLISAGAGLARRLCTAAAATEPEEVAVQAASRSVRQPRLYHRLSALGATGGSV 60
Query: 61 TGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDL 120
LN +I EGK + K L C++ LRK+ +++HALE+++WME+RK+ FSY D+AV LDL
Sbjct: 61 ADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIFFSYADYAVRLDL 120
Query: 121 TAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
+KT G+A AE+YFN LS AKN TYG LLNCYCKE M E+ALALFEKMDEL F ++
Sbjct: 121 LSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSL 180
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
FNNL ++++RLG+PE V PLV++MK+R+IS D TY + MQSY+ LNDI+G ERV E+
Sbjct: 181 TFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEI 240
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL-EEMKPRDRKAYHFLISLYCNTSN 299
E EDK WTTYSNLA++YV A LFEKAELALKKL EEM DR AYHFLISLY +N
Sbjct: 241 KRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINN 300
Query: 300 LDAVNRVWGILKSTFPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
L VNRVW LKS FP TN SY ++LQALA LN +D LK CFEEW+S C S+D+RLA+V
Sbjct: 301 LSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANV 360
Query: 359 IIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALS 418
+RA+L DM ++A I A KR +S F+ + + FM ++L+ R++D AL MEAA S
Sbjct: 361 AVRAFLGWDMIKDAESILYEAVKR--SSGPFYTALDMFMAHHLKVREIDTALKYMEAAAS 418
Query: 419 EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGK 478
E K W+P V F ++FEEEKDV+GAE+FCK+LK+++ LD +AY LL++T +AAG+
Sbjct: 419 EVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNISGLDSNAYQLLLQTXVAAGR 478
Query: 479 LASDMRQ 485
+MR+
Sbjct: 479 TEPEMRK 485
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/455 (57%), Positives = 328/455 (72%), Gaps = 17/455 (3%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
+Y+RLS LGA+GGSV+ LN I+EG K L C++ LRK+GR+ HA+EV+EWM+ R
Sbjct: 1 MYRRLSELGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKR 60
Query: 106 KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALA 165
KM+FS+ D AVYLDLTAKT GIAAAE YF+ L +N TY LLNCYCKELM+E+AL
Sbjct: 61 KMNFSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKALT 120
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
LFEKMD++K L ++ FNNL T+++RLGQPEKV +V +MKQR +S TY +WMQSY
Sbjct: 121 LFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSYG 180
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE------- 278
LND +GV+RV EM + ++ WTTYSNLA+IYVKA LF+KAE AL+KLEE
Sbjct: 181 CLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIECGRD 240
Query: 279 ---MKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTF-PPTNTSYLVLLQALAK 330
K R DR+AYHFLISLY TSNL V+RVW LKS+F TN SYL +LQALAK
Sbjct: 241 CDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAK 300
Query: 331 LNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFF 390
L ++ + +CF+EWES C SYDM LA+V IRA L+ DMYEEAA IF+ A KR FF
Sbjct: 301 LKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKR--TKGLFF 358
Query: 391 KSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE 450
K+RE FM+++L++ Q DLAL M+AA SEAK+ W+P Q TV F +FE+ KDVDGAE
Sbjct: 359 KAREMFMVFFLKNHQPDLALKHMKAAFSEAKEIEWQPDQKTVSAFLNYFEDGKDVDGAER 418
Query: 451 FCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
CK+ K +N L+ +AY LL+KTY AAG+LA +MRQ
Sbjct: 419 LCKIWKQINRLNSNAYILLLKTYTAAGRLAPEMRQ 453
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/455 (57%), Positives = 331/455 (72%), Gaps = 7/455 (1%)
Query: 33 AAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRY 92
A P +LYKRLS LGA+G SV+ LN +++EG K L C+R LRK+GR+
Sbjct: 2 AEVVPVVLEKRKRLYKRLSELGASGESVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRF 61
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLN 152
+A+EV+EWM+ RKM+ S+ AVYLDL AK GIAAAE YF+GLS +N T+GALL+
Sbjct: 62 DYAIEVMEWMQKRKMNVSH---AVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLS 118
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
CYC+ELM+E+AL LFEKMD++KFL ++ FNNL +++LRL QPEKV P+V +MKQ+ +S
Sbjct: 119 CYCRELMSEKALTLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSP 178
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
TY +WMQSY LND +GVERV EM + + WTTY+NLA+IYVKA F+KAE A
Sbjct: 179 CTFTYNMWMQSYGCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESA 238
Query: 273 LKKLEEMKPRD-RKAYHFLISLYCNTSNLDAVNRVWGILKSTF-PPTNTSYLVLLQALAK 330
LKK+EE RD R+AYHFLI+LY TSNL VNRVW LKS F TN SYL +L LAK
Sbjct: 239 LKKVEEQIERDYREAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAK 298
Query: 331 LNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFF 390
L ++ L +CF+EWES C SYDMRLA+V IRA L+ DMYEEAALIF++A KR FF
Sbjct: 299 LKDVEGLLKCFKEWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKR--TEGLFF 356
Query: 391 KSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE 450
+RE FM+++L++ QLDLAL M+AA SE K+ W+P TV FF +FE+EKDV+GAE
Sbjct: 357 NAREMFMVFFLKNHQLDLALKHMKAAFSEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAER 416
Query: 451 FCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
CK+LK +N LD +AY LL+KTYIAAGKLA +MRQ
Sbjct: 417 LCKILKHINRLDSNAYDLLLKTYIAAGKLAPEMRQ 451
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/451 (57%), Positives = 330/451 (73%), Gaps = 7/451 (1%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
P N+ LY RLSALGATGGSV +N +IMEG V+K LE C++ LRK+ RY H L++
Sbjct: 4 PANNQRGLYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQI 63
Query: 99 IEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL 158
+EWME+RK+++S+TD+A+ LDL +K NG+ AAEKYF L AKNR TYGALLNCYCKE+
Sbjct: 64 MEWMETRKINYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEM 123
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
M E+AL LF+KMDELK + +++FNNL TMY+R+ PEKV PL+ +MKQR L TY
Sbjct: 124 MEEKALTLFKKMDELK-ISTSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYN 182
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL-E 277
VWM S + LNDI VE + EM E +K WTTYSNLAS YVKA FEKAELALKKL E
Sbjct: 183 VWMNSCASLNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEE 242
Query: 278 EMKP--RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAI 334
EMK DR YH LISLY +TSNL VNR+W LKS + TN SYLV+LQAL KL I
Sbjct: 243 EMKSDKNDRLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDI 302
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRE 394
+ LK+ ++EWES C ++D+R+ + II AYLQ+DMYE+AA+IF +A KR+ F ++RE
Sbjct: 303 EGLKRTYKEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGP--FSRARE 360
Query: 395 SFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
FM+Y+L+ +Q+D A + +E+ALSE+K+ W P T F +FEEEKDV+GAE+F ++
Sbjct: 361 MFMVYFLKLKQVDSAFSHLESALSESKEKEWHPSLATTTAFLNYFEEEKDVEGAEDFARI 420
Query: 455 LKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
LK L CLD S Y LL+KTY+AAGKLA DMR+
Sbjct: 421 LKRLKCLDASGYHLLLKTYVAAGKLAPDMRK 451
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/461 (55%), Positives = 331/461 (71%), Gaps = 4/461 (0%)
Query: 1 MMIRNQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSV 60
MM RN +RLIS G+ L R+LC+ T + +A + + +LY RLSALGATGGSV
Sbjct: 40 MMARNPNRLISAGAGLARRLCTAAAATEPEEVAVQAASRSVRQPRLYHRLSALGATGGSV 99
Query: 61 TGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDL 120
LN +I EGK + K L C++ LRK+ +++HALE+++WME+RK+ FSY D+AV LDL
Sbjct: 100 ADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIFFSYADYAVRLDL 159
Query: 121 TAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
+KT G+A AE+YFN LS AKN TYG LLNCYCKE M E+ALALFEKMDEL F ++
Sbjct: 160 LSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSL 219
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
FNNL ++++RLG+PE V PLV++MK+R+IS D TY + MQSY+ LNDI+G ERV E+
Sbjct: 220 TFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEI 279
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL-EEMKPRDRKAYHFLISLYCNTSN 299
E EDK WTTYSNLA++YV A LFEKAELALKKL EEM DR AYHFLISLY +N
Sbjct: 280 KRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINN 339
Query: 300 LDAVNRVWGILKSTFPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
L VNRVW LKS FP TN SY ++LQALA LN +D LK CFEEW+S C S+D+RLA+V
Sbjct: 340 LSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANV 399
Query: 359 IIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALS 418
+RA+L DM ++A I A KR +S F+ + + FM ++L+ R++D AL MEAA S
Sbjct: 400 AVRAFLGWDMIKDAESILYEAVKR--SSGPFYTALDMFMAHHLKVREIDTALKYMEAAAS 457
Query: 419 EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
E K W+P V F ++FEEEKDV+GAE+FCK+LK+++
Sbjct: 458 EVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNIS 498
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/498 (51%), Positives = 338/498 (67%), Gaps = 21/498 (4%)
Query: 2 MIRNQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPF-----PTGNEDKLYKRLSALGAT 56
M R+ +RLI G RQL ST TE + +AP P +GN +LY+RLSALGAT
Sbjct: 1 MWRSAARLIGNGRCPRRQL-STATEASA---SAPDPSYKEQRSSGNPLRLYRRLSALGAT 56
Query: 57 GGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
GG+V LN Y+M+G ++RK L CV+ LRK+GR+ H LE++EWME R ++ + D AV
Sbjct: 57 GGTVDKVLNDYVMDGMSIRKVELMRCVKELRKYGRFNHGLEIMEWMEKRGINLGHGDLAV 116
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
LDL KT GI AE YFNGL AKN TYG+LLN YCK+L +E+AL LF+KMD+LKF
Sbjct: 117 RLDLICKTKGITEAENYFNGLVPSAKNPATYGSLLNSYCKKLDSEKALQLFQKMDKLKFF 176
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
N++ FNNL +MY+RLGQ EKV LV+QMKQ N+ TY +W+QS H+ D +G+++V
Sbjct: 177 RNSLPFNNLMSMYMRLGQQEKVPELVSQMKQMNLPPCTFTYNIWIQSLGHMRDFEGIKKV 236
Query: 237 FYEMCNECE--DKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISL 293
EM N+ + WTTYSNLA++Y A FE+A+LALK +EE + DR AYHFL++L
Sbjct: 237 LEEMRNDVNFGNNFNWTTYSNLAAVYTSAGEFERAKLALKMMEERIDSHDRNAYHFLLTL 296
Query: 294 YCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
Y ++L+ V+RVWG LK+ F TN SYLV+LQALA+L ++ + + FEEWES C+SYD
Sbjct: 297 YGGIADLEEVHRVWGCLKAKFNQVTNASYLVMLQALARLKDVEGISKVFEEWESVCTSYD 356
Query: 353 MRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNE 412
MR+A+V IR YL+K MY EA +F+ A +R +FK+RE M+ L+ RQL+ AL +
Sbjct: 357 MRVANVAIRVYLEKGMYNEAEAVFDGAMERTPGP--YFKTREMLMVSLLKRRQLEPALKQ 414
Query: 413 MEAALSEAKQF------HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAY 466
M+AA +E Q WRP V+ FF +FEEEKDV+GAE+ K+LK +N D + Y
Sbjct: 415 MKAAFTEVGQNEKGHEKEWRPSAEIVNAFFGYFEEEKDVEGAEKMWKILKCINRCDSTVY 474
Query: 467 SLLIKTYIAAGKLASDMR 484
LL+KTYIAAGK A DMR
Sbjct: 475 RLLMKTYIAAGKSAVDMR 492
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/480 (50%), Positives = 324/480 (67%), Gaps = 22/480 (4%)
Query: 5 NQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGAL 64
N +RLIS G +L+R+LC+ AA TP N LY+ LSAL TGG+V+ L
Sbjct: 2 NYARLISGGGWLLRRLCT----------AAETPAKKPN---LYRMLSALDITGGTVSQTL 48
Query: 65 NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
+ YIMEGK ++K LE CV LRK+ R++HALE+IEWME RK++FS++++AV LDL +KT
Sbjct: 49 DQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWMEIRKVNFSWSNYAVQLDLVSKT 108
Query: 125 NGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
G+ AAE +F GL AKNRYTYGALLNCYCKELM ++AL+ F+ MDEL ++ N +AFNN
Sbjct: 109 KGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGYVTN-LAFNN 167
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ T++++LG+P+KV LV MK+R I + TY +WM S + ND+ G ERV+ EM E
Sbjct: 168 VMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTEN 227
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAV 303
E + W TYSNLASIYVK + FEKAE+ LK LEE +KP+ R AYH L+ LY T NL V
Sbjct: 228 EGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEV 287
Query: 304 NRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
+RVW LKS P TN SYLV+L L +LN ++ L +CF+EWE+ C SYD RL V + A+
Sbjct: 288 HRVWDSLKSVSPVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVSYDARLVSVCVSAH 347
Query: 364 LQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQF 423
L ++M EEA L+F A +R+ FF+ RE FM ++L+ +LD A+ +EAALSE K
Sbjct: 348 LNQNMLEEAELVFEEASRRSKGP--FFRVREEFMKFFLKKHELDAAVRHLEAALSEVKGD 405
Query: 424 HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
WRP V FF+++EEE DVDG +EF K+ K+ N D IK+ I A K + ++
Sbjct: 406 KWRPSPQVVGAFFKYYEEETDVDGVDEFSKIFKANNFDDS-----WIKSCITASKSSPEI 460
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/480 (50%), Positives = 323/480 (67%), Gaps = 22/480 (4%)
Query: 5 NQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGAL 64
N +RLIS G +L+R+LC+ AA TP N LY+ LSAL TGG+V+ L
Sbjct: 2 NYARLISGGGWLLRRLCT----------AAETPAKKPN---LYRMLSALDITGGTVSQTL 48
Query: 65 NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
+ YIMEGK ++K LE CV LRK+ R++HALE+IEWME RK++FS++++AV LDL +KT
Sbjct: 49 DQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWMEIRKVNFSWSNYAVQLDLVSKT 108
Query: 125 NGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
G+ AAE +F GL AKNRYTYGALLNCYCKELM ++AL+ F+ MDEL ++ N +AFNN
Sbjct: 109 KGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGYVTN-LAFNN 167
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ T++++LG+P+KV LV MK+R I + TY +WM S + ND+ G ERV+ EM E
Sbjct: 168 VMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTEN 227
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAV 303
E + W TYSNLASIYVK + FEKAE+ LK LEE +KP+ R AYH L+ LY T NL V
Sbjct: 228 EGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEV 287
Query: 304 NRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
+RVW LKS P TN SYLV+L L +LN ++ L +CF+EWE+ C SYD RL V + A+
Sbjct: 288 HRVWDSLKSVSPVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVSYDARLVSVCVSAH 347
Query: 364 LQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQF 423
L ++M EEA L+F A +R+ FF+ RE FM ++L+ +LD A+ +EAALSE K
Sbjct: 348 LNQNMLEEAELVFEEASRRSKGP--FFRVREEFMKFFLKKHELDAAVRHLEAALSEVKGD 405
Query: 424 HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
WRP V F +++EEE DVDG +E K+LK+ N D IK+ I A K + ++
Sbjct: 406 KWRPSPQVVGAFLKYYEEETDVDGVDELSKILKANNFDDS-----WIKSCITASKSSPEI 460
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 183/425 (43%), Gaps = 64/425 (15%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL---SEYAKNR 144
K G + +++E M+ R + S + ++++ A +N + AE+ + + +E
Sbjct: 174 KLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTENEGQIGW 233
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+TY L + Y K E+A + + ++E A++ L +Y G +V + +
Sbjct: 234 HTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDS 293
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY-SNLASIYVKA 263
+K + + N +Y+V + + LND++G+ + F E C +Y + L S+ V A
Sbjct: 294 LKSVS-PVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASC------VSYDARLVSVCVSA 346
Query: 264 EL----FEKAELALKKLEEMKPRDRKAY----HFLISLYCNTSNLDAVNR--------VW 307
L E+AEL EE R + + + + LDA R V
Sbjct: 347 HLNQNMLEEAELVF---EEASRRSKGPFFRVREEFMKFFLKKHELDAAVRHLEAALSEVK 403
Query: 308 GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF------EEWESRC------------- 348
G P ++L + ++ +D L + + W C
Sbjct: 404 GDKWRPSPQVVGAFLKYYEEETDVDGVDELSKILKANNFDDSWIKSCITASKSSPEIDPG 463
Query: 349 --------SSYDMRLADVI-----IRAYLQKDMYEEAALIFNNAKKRANASARFFKSRES 395
+ + RL D++ + +YL+++ EEAAL+F A++R + F +E
Sbjct: 464 MKEDSQVYHAQETRLLDIMEKQLCVASYLKQNTVEEAALVFEEARRRRSKEP-LFSIKEK 522
Query: 396 FMIYYLRSRQLDLALNEMEAALSEAK-QFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
M Y+L +LD A+ +E A SE K WRP V F ++EEE +VDG +E K+
Sbjct: 523 LMSYFLEIHELDDAVRHLEVAFSEVKGDDEWRPSVQIVWDFLEYYEEEMNVDGHDELYKI 582
Query: 455 LKSLN 459
K+++
Sbjct: 583 TKAIS 587
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/456 (50%), Positives = 306/456 (67%), Gaps = 14/456 (3%)
Query: 5 NQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGAL 64
N SRLIS G L+R+LC+ T AA P N LY+RL+ L TGG+V+ L
Sbjct: 61 NYSRLISGGGRLLRRLCTAAT-------AAELPNKKAN---LYRRLADLEKTGGTVSQTL 110
Query: 65 NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
N YI+EGK + KD LE CV+ LRK+ R+ HA E++EWM R+++FS+ ++AVYLDL +K
Sbjct: 111 NQYIIEGKALGKDELERCVQELRKYRRFHHAFEIMEWMMMRQINFSWDNYAVYLDLVSKV 170
Query: 125 NGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
G+ AE +FN AKN+YTYG+LLNCYCKELM ++AL+ F+KMDE +L +++F N
Sbjct: 171 KGVVEAENHFNSFPPPAKNKYTYGSLLNCYCKELMLDKALSHFDKMDEFGYL-TSLSFTN 229
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L +MY+RL QP KV LVN MK+R I + TYI+WM S + LND+ VERV+ EM E
Sbjct: 230 LMSMYMRLSQPSKVPQLVNVMKERKIRMTEFTYILWMNSCAALNDLGEVERVYEEMKRED 289
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAV 303
EDK W TYSNLA+IY+KA FEKAEL LKK+E MKPR R+ YHFL+SLY T N+ V
Sbjct: 290 EDKIDWKTYSNLAAIYIKAGFFEKAELMLKKVEGVMKPRQRETYHFLLSLYAGTGNVKEV 349
Query: 304 NRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
RVWG LK P TN SYL++L L +LN ++ + + F+EWESR SYD RL V ++AY
Sbjct: 350 YRVWGTLKKITPVTNRSYLIMLSNLRRLNDMEGIIKLFKEWESRHVSYDSRLVGVAVQAY 409
Query: 364 LQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQF 423
L ++M +EA L+F A K FF+ RE FM L QLD A++ +EAALSEA +
Sbjct: 410 LSQNMDKEAVLVFEEALKSCRGP--FFRIREMFMASLLEKGQLDGAMSHLEAALSEASDY 467
Query: 424 HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
++P V F +++EEE D+DG +E K+L+S N
Sbjct: 468 KYQPSPQVVSAFLKYYEEETDLDGVDELSKILRSHN 503
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/475 (49%), Positives = 309/475 (65%), Gaps = 7/475 (1%)
Query: 16 LVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVR 75
+V S+P R + P + +LYK+LS L TGG+V LN +IMEG TVR
Sbjct: 43 VVEASVSSPAAENGVRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVR 102
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
KD L C ++LRKF R +HA E+ +WME RKM FS +D A+ LDL KT G+ AAE YFN
Sbjct: 103 KDDLFRCAKTLRKFRRPQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFN 162
Query: 136 GLSEYAKN-RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
L AKN + TYGAL+NCYC EL E+A A FE MDEL F+ N++ FNN+ +MY+RL Q
Sbjct: 163 NLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQ 222
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
PEKV LV+ MKQR IS +TY +WMQS LND+DG+E++ EM + E K W T+S
Sbjct: 223 PEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFS 282
Query: 255 NLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
NLA+IY KA L+EKA+ ALK +EE M P +R ++HFL+SLY S V RVW LK
Sbjct: 283 NLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKA 342
Query: 314 FPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P N SYLV+LQA++KL +D +K+ F EWES+C +YDMRLA++ I YL+ +MYEEA
Sbjct: 343 RPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEA 402
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQF--HWRPMQV 430
I + A K++ F K+R+ MI+ L + + DLA+ +EAA+S++ + W
Sbjct: 403 EKILDGAMKKSKGP--FSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSE 460
Query: 431 TVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
V FF FE+ KDVDGAE+FCK+L + LD + LIKTY AA K + DMR+
Sbjct: 461 LVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRE 515
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/475 (49%), Positives = 309/475 (65%), Gaps = 7/475 (1%)
Query: 16 LVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVR 75
+V S+P R + P + +LYK+LS L TGG+V LN +IMEG TVR
Sbjct: 43 VVEASVSSPAAENGVRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVR 102
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
KD L C ++LRKF R +HA E+ +WME RKM FS +D A+ LDL KT G+ AAE YFN
Sbjct: 103 KDDLFRCAKTLRKFRRPQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFN 162
Query: 136 GLSEYAKN-RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
L AKN + TYGAL+NCYC EL E+A A FE MDEL F+ N++ FNN+ +MY+RL Q
Sbjct: 163 NLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQ 222
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
PEKV LV+ +KQR IS +TY +WMQS LND+DG+E++ EM + E K W T+S
Sbjct: 223 PEKVPVLVDAIKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFS 282
Query: 255 NLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
NLA+IY KA L+EKA+ ALK +EE M P +R ++HFL+SLY S V RVW LK
Sbjct: 283 NLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKA 342
Query: 314 FPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P N SYLV+LQA++KL +D +K+ F EWES+C +YDMRLA++ I YL+ +MYEEA
Sbjct: 343 RPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEA 402
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQF--HWRPMQV 430
I + A K++ F K+R+ MI+ L + + DLA+ +EAA+S++ + W
Sbjct: 403 EKILDGAMKKSKGP--FSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSE 460
Query: 431 TVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
V FF FE+ KDVDGAE+FCK+L + LD + LIKTY AA K + DMR+
Sbjct: 461 LVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRE 515
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/507 (47%), Positives = 320/507 (63%), Gaps = 27/507 (5%)
Query: 1 MMIRNQSRLISTGSYLVRQLCST------PTETVSQRIAAP---------TPFPTG--NE 43
M RN LI++GS L ++ C+T T V +++P P PT +
Sbjct: 1 MNFRN---LITSGSRLGKRFCATVFAPASATGVVEASVSSPAAANGVEASVPAPTAASRQ 57
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
+LYK+LS L GG+V LN +IMEG TVRK L C + LRKF R++HALE+ +WME
Sbjct: 58 RELYKKLSKLSVAGGTVAETLNQFIMEGITVRKVDLFRCAKDLRKFRRHQHALEIFDWME 117
Query: 104 SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN-RYTYGALLNCYCKELMTER 162
RKM FS +D A+ LDL AK G+ AAE YFN L AKN + TYGAL+NCYC EL +
Sbjct: 118 KRKMTFSVSDHAIRLDLIAKAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGK 177
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A A FEKMDEL F+ N++ FNN+ +MY+RL QPEKV LV+ MKQR IS +TY +WMQ
Sbjct: 178 AKAHFEKMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQ 237
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKP 281
S LND+DG+E++ EM + E K W T+SNLA+I+ KA L+EKAE ALK +E +M P
Sbjct: 238 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESALKSMEKKMNP 297
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-SYLVLLQALAKLNAIDILKQC 340
+R ++HFLISLY S V RVW LK P N SYLV+LQA++KL ID +K+
Sbjct: 298 NNRDSHHFLISLYAGISKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKI 357
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY 400
F EWES+C +YDMRLA++ I YL+ +MYEEA I + A +++ F K+R+ MI+
Sbjct: 358 FTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMEKSKGP--FSKARQLLMIHL 415
Query: 401 LRSRQLDLALNEMEAALSEAKQF--HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
L + + DLA+ +E A+S+ + W V FF F+ KDVDGAE+FCK+L +
Sbjct: 416 LENGKADLAMKHLETAVSDPAENKDEWSWSSELVSLFFLHFKRAKDVDGAEDFCKILSNW 475
Query: 459 NCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+D S LIKTY AA K DMR+
Sbjct: 476 KPVDCETMSFLIKTYAAAEKTCPDMRE 502
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/477 (46%), Positives = 305/477 (63%), Gaps = 8/477 (1%)
Query: 14 SYLVRQLCST---PTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIME 70
S L R+ C+T +S AA P +YK+LS+LG GG + LN +ME
Sbjct: 5 SRLARRFCATLPASPAAISGEAAASVPTKAKKNPSVYKKLSSLGTRGGKMEETLNQLVME 64
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA 130
G V+K L + LRKF + + ALE+ EWME +++ F+ +D A+ LDL AKT G+ AA
Sbjct: 65 GVPVKKHELIRYAKDLRKFRQPQRALEIFEWMERKEIVFTGSDHAIRLDLIAKTKGLEAA 124
Query: 131 EKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYL 190
E YFN L++ KN+ TYG+LLNCYC E ++A A FE M +L + N++ FNNL MYL
Sbjct: 125 ETYFNSLNDSIKNQSTYGSLLNCYCVEKEEDKAKAHFENMVDLNHVSNSLPFNNLMAMYL 184
Query: 191 RLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW 250
R+GQ EKV LV MKQ+NI+ ++TY +W+QS L D+DGVE+V EM E E W
Sbjct: 185 RIGQSEKVPALVVAMKQKNITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGISSW 244
Query: 251 TTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI 309
T++NLA+IY+K L++KAE ALK LE +M P R YHFLISLY +N V RVW +
Sbjct: 245 DTFANLAAIYIKVGLYDKAEEALKSLENKMNPHIRDCYHFLISLYAGIANASEVYRVWDL 304
Query: 310 LKSTFPPT-NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDM 368
LK P N+SYL +LQAL+KLN ID +K+ F EWES C +YDMR+A+V I +YL+++M
Sbjct: 305 LKKRHPNVNNSSYLTMLQALSKLNDIDGIKKIFTEWESTCWTYDMRMANVAISSYLKQNM 364
Query: 369 YEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPM 428
YEEA +FN A + +F K+R+ M++ L++ Q DLAL EAA+ + + +W
Sbjct: 365 YEEAEAVFNGAMTKCK--GQFSKARQLLMMHLLKNDQADLALKHFEAAVLDLDK-NWTWS 421
Query: 429 QVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ +FF FEE KDVDGAEEFCK L + L Y+LL+KTY++A K DM++
Sbjct: 422 SELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLGSETYTLLMKTYLSAEKACPDMKK 478
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 313/485 (64%), Gaps = 13/485 (2%)
Query: 9 LISTGSYLVRQLCST---PTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGS-VTGAL 64
++ + S L R+ C+T T +S AA P +YK+LS+LG GG + L
Sbjct: 1 MMHSVSRLARRFCATLATATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETL 60
Query: 65 NAYIMEGKTVRK-DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAK 123
N ++MEG V+K D++ Y + LRKF + + ALE+ EWME +++ F+ +D A+ L+L AK
Sbjct: 61 NQFVMEGVPVKKHDLIRY-AKDLRKFRQPQRALEIFEWMERKEIAFTGSDHAIRLNLIAK 119
Query: 124 TNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
+ G+ AAE YFN L + KN+ TYG+LLNCYC E +A A FE M +L + N++ FN
Sbjct: 120 SKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFN 179
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
NL MY+ LGQPEKV LV MK+++I+ ++TY +W+QS L D+DGVE+V EM E
Sbjct: 180 NLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAE 239
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDA 302
E W T++NLA+IY+K L+ KAE ALK LE M P R YHFLI+LY +N
Sbjct: 240 GEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASE 299
Query: 303 VNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
V RVW +LK +P N+SYL +L+AL+KL+ ID +K+ F EWES C +YDMR+A+V I
Sbjct: 300 VYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAIS 359
Query: 362 AYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA-LSEA 420
+YL+++MYEEA +FN A K+ +F K+R+ M++ L++ Q DLAL EAA L +
Sbjct: 360 SYLKQNMYEEAEAVFNGAMKKCK--GQFSKARQLLMMHLLKNDQADLALKHFEAAVLDQD 417
Query: 421 KQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLA 480
K + W ++ +FF FEE KDVDGAEEFCK L + L Y+LL+KTY+AAGK
Sbjct: 418 KNWTWSSELIS--SFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKAC 475
Query: 481 SDMRQ 485
DM++
Sbjct: 476 PDMKK 480
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/480 (46%), Positives = 310/480 (64%), Gaps = 13/480 (2%)
Query: 14 SYLVRQLCST---PTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGS-VTGALNAYIM 69
S L R+ C+T T +S AA P +YK+LS+LG GG + LN ++M
Sbjct: 5 SRLARRFCATLATATAEISGEAAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVM 64
Query: 70 EGKTVRK-DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIA 128
EG V+K D++ Y + LRKF + + ALE+ EWME +++ F+ +D A+ L+L AK+ G+
Sbjct: 65 EGVPVKKHDLIRY-AKDLRKFRQPQRALEIFEWMERKEIAFTGSDHAIRLNLIAKSKGLE 123
Query: 129 AAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
AAE YFN L + KN+ TYG+LLNCYC E +A A FE M +L + N++ FNNL M
Sbjct: 124 AAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAM 183
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC 248
Y+ LGQPEKV LV MK+++I+ ++TY +W+QS L D+DGVE+V EM E E
Sbjct: 184 YMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIF 243
Query: 249 RWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
W T++NLA+IY+K L+ KAE ALK LE M P R YHFLI+LY +N V RVW
Sbjct: 244 SWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVW 303
Query: 308 GILKSTFPPT-NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
+LK +P N+SYL +L+AL+KL+ ID +K+ F EWES C +YDMR+A+V I +YL++
Sbjct: 304 DLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQ 363
Query: 367 DMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA-LSEAKQFHW 425
+MYEEA +FN A K+ +F K+R+ M++ L++ Q DLAL EAA L + K + W
Sbjct: 364 NMYEEAEAVFNGAMKKCK--GQFSKARQLLMMHLLKNDQADLALKHFEAAVLDQDKNWTW 421
Query: 426 RPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
++ +FF FEE KDVDGAEEFCK L + L Y+LL+KTY+AAGK DM++
Sbjct: 422 SSELIS--SFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKK 479
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/455 (45%), Positives = 298/455 (65%), Gaps = 12/455 (2%)
Query: 32 IAAPTPFPTGNEDK---LYKRLSALGATGGSVTGALNAYIMEGKTVRK-DMLEYCVRSLR 87
+A P F T +DK LY +LSAL T G V L+ ++ EGK+V++ DM+ CV LR
Sbjct: 14 VATPRWFSTATKDKEASLYWKLSALRGTEGDVAETLDKWVKEGKSVKRFDMIS-CVNQLR 72
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTY 147
+F +Y+HA ++ EWME K + D A+ +DL AKT GIA AE YFN L E AK TY
Sbjct: 73 RFKKYKHAAQIYEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTY 132
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
GALLNCYCKE M ++A+ LF+K+ EL F+ + +++NN+ ++YLR+GQPEKV LV++M++
Sbjct: 133 GALLNCYCKENMVDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEE 192
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
++I D TY + M SY+ + D + VE+V +M ++ W TY NLA+IYV A +
Sbjct: 193 KDIPADLYTYNLLMNSYASVKDFEAVEQVLEKMKKRGVER-DWFTYGNLANIYVDAGHTK 251
Query: 268 KAELALKKLEEMKP-RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-SYLVLL 325
KA AL+KLE+ K D +A+ LI+LY TSNL+ VNR W LK P N SYL++L
Sbjct: 252 KANYALQKLEQNKNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIML 311
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA 385
AL+KL + L++CF+EWES CS+YD+RL++V++ +YL ++M EEA L+ + KR
Sbjct: 312 LALSKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPE 371
Query: 386 SARFFKSRESFMIYYLRSRQLDLALN--EMEAALSEAKQFHWRPMQVTVDTFFRFFEEEK 443
K+ + FM +YL+ QLDLA+ +M A+ ++ + W P + T+ F +FEE K
Sbjct: 372 LK--LKTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVK 429
Query: 444 DVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGK 478
DVD AE+FC+ ++ ++ LD Y L++TYIAAGK
Sbjct: 430 DVDSAEKFCETMRKISRLDSKIYDSLLRTYIAAGK 464
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/475 (45%), Positives = 296/475 (62%), Gaps = 16/475 (3%)
Query: 22 STPTETVSQRIAAPTPFP-----TGNEDKLYKRLSALGATG-GSVTGALNAYIMEGKTVR 75
+ P V+ A P T + LY+RLSALG G GSV+ LN ++ EG+ R
Sbjct: 51 AQPVPKVASEAAHPVAVDANKAVTKDSRPLYRRLSALGNAGEGSVSRVLNKWVREGREAR 110
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
LE V+ LRK+ R+ ALE+++WM ++ M+ SYT+ A+ LDL K GI AAEKYF
Sbjct: 111 SVDLERYVKELRKYKRHAQALELMDWMVHTKGMNMSYTNHAIRLDLVYKVRGIEAAEKYF 170
Query: 135 NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
NGL + AKN TYGALLNCYC E+A LF KMD+L +T+ FNNL ++Y++LGQ
Sbjct: 171 NGLPDPAKNHRTYGALLNCYCSSKKEEKATDLFHKMDDLGIASSTLPFNNLMSLYMKLGQ 230
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+KV L +MK +N+ DNLT V M SY+ LN ID VE V EM E W+ YS
Sbjct: 231 HKKVAGLFEEMKAKNVKPDNLTCCVLMTSYAALNKIDAVEEVLKEM-EEKNAALGWSAYS 289
Query: 255 NLASIYVKAELFEKAELALKKLEEM-KPRD-RKAYHFLISLYCNTSNLDAVNRVWGILKS 312
LASIYV A L EKAE ALKKLE + +PRD R+ + FL+SLY + NL VNRVW ++K+
Sbjct: 290 TLASIYVSAGLVEKAESALKKLEGLVQPRDGRQPFDFLMSLYASVGNLSEVNRVWDVVKA 349
Query: 313 TFPP-TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
TFP TNTSY +LQAL KLN D +KQ FEEWES YD++L +++ RA+L+ + +E
Sbjct: 350 TFPKVTNTSYFSMLQALYKLNDADRIKQIFEEWESNHECYDVKLTNIMTRAHLKNGLTKE 409
Query: 372 AALIFNNAKKRANASARF-FKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQV 430
A L++ AK + A F K+ E F+ +Y+ + + AL+ +E K+ + Q
Sbjct: 410 AELLWEKAKAKG---ADFDSKTCELFLDHYMGTEDMKSALHWVENVTKLPKKAG-KLDQE 465
Query: 431 TVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ F ++FEE+KDV GAE+ C L++L C+D Y L++TY+AAG+ +RQ
Sbjct: 466 KIQKFSKYFEEQKDVQGAEKLCSCLRTLGCIDGKVYESLLRTYLAAGETNHSLRQ 520
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/482 (43%), Positives = 305/482 (63%), Gaps = 19/482 (3%)
Query: 2 MIRNQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVT 61
M N SRL+ S + ST T T ++ E LY +LSAL T G V
Sbjct: 1 MASNTSRLVLMRSVATPRWFSTATATAAK----------DKEASLYWKLSALRGTEGDVA 50
Query: 62 GALNAYIMEGKTVRK-DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDL 120
L+ ++ EGK+V++ DM+ CV LR+F +Y+HA ++ EWME K + D A+ +DL
Sbjct: 51 ETLDKWVKEGKSVKRFDMIS-CVNQLRRFKKYKHAAQIYEWMEKSKNDLNNADRAIRIDL 109
Query: 121 TAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
AKT GIA AE YFN L E AK TYGALLNCYCKE M ++A+ LF+K+ EL F+ + +
Sbjct: 110 LAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMLDKAVELFKKLKELNFVSSAL 169
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
++NN+ ++YLR+GQPEKV LV++M++++I D TY + M SY+ + D + VE+V +M
Sbjct: 170 SYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLDKM 229
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP-RDRKAYHFLISLYCNTSN 299
++ W TY NLA+IYV A +KA AL+KLE+ K D +A+ LI+LY TSN
Sbjct: 230 KKRGVER-DWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAFRMLINLYARTSN 288
Query: 300 LDAVNRVWGILKSTFPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
L+ VNR W LK P N SYL++L AL+KL + L++CF+EWES CS+YD+RL++V
Sbjct: 289 LEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLSNV 348
Query: 359 IIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALN--EMEAA 416
++ +YL +++ EEA L+ + KR K+ + FM +YL+ QLDLA+ +M A+
Sbjct: 349 MLESYLNREIIEEANLLSESIAKRGPELK--LKTLDLFMKFYLKKHQLDLAMKYLDMGAS 406
Query: 417 LSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAA 476
++ + W P + T+ F +FEE KDVD AE+FC+ ++ ++ LD Y L++TYIAA
Sbjct: 407 KADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRKISRLDSKIYDSLLRTYIAA 466
Query: 477 GK 478
GK
Sbjct: 467 GK 468
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/453 (45%), Positives = 290/453 (64%), Gaps = 13/453 (2%)
Query: 40 TGNEDKLYKRLSALGATG-GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
T + LY+RLSALG G GSV+ LN ++ EG+ R LE V+ LR++ R+ ALE+
Sbjct: 80 TKDSRPLYRRLSALGNAGEGSVSAVLNKWLREGRETRSVDLERYVKELRRYKRHSQALEL 139
Query: 99 IEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKE 157
++WM ++ M+ SYT+ A+ LDL K G+ AAEKYF GL + AKN T+GALLNCYC
Sbjct: 140 MDWMVHTKGMNMSYTNHAIRLDLIYKVRGLEAAEKYFEGLPDPAKNHRTFGALLNCYCSS 199
Query: 158 LMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
E+A L+ KMDEL +T+ NNL ++Y++LGQ +KV L +MK++N+ DNLT
Sbjct: 200 KEEEKATDLYRKMDELGISSSTLPINNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTC 259
Query: 218 IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE 277
+ M S + LN ID VE+V EM E + W+ YS LASIY A L EKAE ALKKLE
Sbjct: 260 CILMTSLAALNKIDDVEQVLKEM-EEKDGVLGWSAYSTLASIYQSAGLVEKAESALKKLE 318
Query: 278 EM-KPRD-RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAI 334
+ + RD R+ + FL+SLY + NL V RVWG++K+TFP TNTSY +LQAL KLN
Sbjct: 319 GLVQDRDGRQPFDFLMSLYASVGNLSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDA 378
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR- 393
D +KQ FEEWES YD +L +V+ RA+L+ M +EA L++ AK++ F S+
Sbjct: 379 DYMKQVFEEWESNHEFYDAKLTNVMTRAHLKNGMAKEAELLWEKAKEKGAC----FDSKT 434
Query: 394 -ESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFC 452
E F+ +Y+ + + ALN +E K+ + Q + F ++FEE+KDV GAE FC
Sbjct: 435 CELFLDHYMVAGDMKSALNWVENVTKLPKKTA-KLDQDKIPKFSKYFEEQKDVQGAERFC 493
Query: 453 KVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ L++L C+D AY L++TY+AAG+ + +RQ
Sbjct: 494 RCLRALGCIDGKAYESLLRTYLAAGETSRSLRQ 526
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 195/445 (43%), Positives = 282/445 (63%), Gaps = 9/445 (2%)
Query: 46 LYKRLSALGATG-GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-E 103
LY+RLSALG+ G GSV+ LN ++ EG R D L V+ LRK+ R+ HALE+++WM
Sbjct: 50 LYRRLSALGSAGEGSVSRVLNKWVREGGATRSDDLVKHVKELRKYKRHAHALELMDWMVN 109
Query: 104 SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
+R M+ S+T+ A+ L+L K G+ AAE YF L + AKN TYG+LL+CYC M E+A
Sbjct: 110 ARGMNMSHTNHAIRLELIYKVRGLEAAENYFANLPDPAKNHRTYGSLLSCYCSAKMEEKA 169
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
L+ +MDEL +T+ NNL ++Y++L Q KV L +MK +N+ ++LT + M S
Sbjct: 170 TNLYRQMDELGIWSSTLPINNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCCILMTS 229
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KP 281
Y+ LN ID +E + EM E + W+ YS LASIYV A F KAE ALKKLE +
Sbjct: 230 YAALNKIDDIEELLKEMV-EKDVTLGWSAYSTLASIYVNAGQFGKAESALKKLEGLISAH 288
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQC 340
DR+ + FL+SLY + NL VNRVW ++KS F TNTSYL +L AL KLN ID +KQ
Sbjct: 289 DDRQPFDFLLSLYASLGNLSEVNRVWNVIKSKFSKVTNTSYLGMLHALYKLNDIDRMKQI 348
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY 400
+ EWES ++D++L +++IR++L+ M EEA ++ K+ N + K+ E F+ +Y
Sbjct: 349 YMEWESNYETFDVKLTNMMIRSHLKVGMTEEAEMLVEKVKE--NGAEFDTKTCELFLDHY 406
Query: 401 LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC 460
+ + ++ ALN +E +K+ + Q + F ++FEE KD DGAE FC L++L C
Sbjct: 407 MGTEDMNSALNWLENMTKLSKKAE-KLDQDRIYKFQKYFEEHKDADGAERFCNCLRTLGC 465
Query: 461 LDFSAYSLLIKTYIAAGKLASDMRQ 485
+D AY L++TY+AAGK + +RQ
Sbjct: 466 IDGKAYESLLRTYLAAGKKSCSLRQ 490
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 195/446 (43%), Positives = 281/446 (63%), Gaps = 11/446 (2%)
Query: 46 LYKRLSALGATG-GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-E 103
LY+RLSALG G GSV+ +N ++ EG+ R L V+ LRK+ R+ HALE++EWM
Sbjct: 57 LYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMVN 116
Query: 104 SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
++ M+ SYT+ A+ LDL K GI AAE+YF GL + KN TYGALLNCYC M ++A
Sbjct: 117 TKGMNMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKMEDKA 176
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
++ KMDEL +T+ NNL ++Y+++GQ KV L +MK +N+ DNLT + M S
Sbjct: 177 TDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSS 236
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KP 281
Y+ LN ID V V EM E + W+ YS LAS+YV A + E+AE ALKKLE +
Sbjct: 237 YAALNKIDTVGEVLKEM-EEKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDVQ 295
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQC 340
R+ + FL+SLY + NL VNRVW ++K+ F TNTSYL +LQAL KLN D +KQ
Sbjct: 296 AGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQI 355
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF-FKSRESFMIY 399
+E+WES +YD RL +++ RA+L+ + +EA L++ K++ A F K+ E F+ +
Sbjct: 356 YEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKG---AEFDSKTCELFLEH 412
Query: 400 YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
Y+ + ALN +E +++ + + Q + F ++FEE KDV+GAE F L++
Sbjct: 413 YMGKGDMTSALNWVE-NMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLRTSG 471
Query: 460 CLDFSAYSLLIKTYIAAGKLASDMRQ 485
C+D AY L++TY+AAGK + +RQ
Sbjct: 472 CIDGKAYESLLRTYLAAGKTSRSIRQ 497
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/446 (43%), Positives = 280/446 (62%), Gaps = 11/446 (2%)
Query: 46 LYKRLSALGATG-GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-E 103
LY+RLSALG G GSV+ +N ++ EG+ R L V+ LRK+ R+ HALE++EWM
Sbjct: 57 LYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMVN 116
Query: 104 SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
++ M+ SYT+ A+ LDL K GI AAE YF GL + KN TYGALLNCYC M ++A
Sbjct: 117 TKGMNMSYTNHAIRLDLIYKVRGIEAAELYFAGLPDPGKNHKTYGALLNCYCSAKMEDKA 176
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
++ KMDEL +T+ NNL ++Y+++GQ KV L +MK +N+ DNLT + M S
Sbjct: 177 TDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSS 236
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KP 281
Y+ LN ID V V EM E + W+ YS LAS+YV A + E+AE ALKKLE +
Sbjct: 237 YAALNKIDTVGEVLKEM-EEKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDVQ 295
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQC 340
R+ + FL+SLY + NL VNRVW ++K+ F TNTSYL +LQAL KLN D +KQ
Sbjct: 296 AGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQI 355
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF-FKSRESFMIY 399
+E+WES +YD RL +++ RA+L+ + +EA L++ K++ A F K+ E F+ +
Sbjct: 356 YEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKG---AEFDSKTCELFLEH 412
Query: 400 YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
Y+ + ALN +E +++ + + Q + F ++FEE KDV+GAE F L++
Sbjct: 413 YMGKGDMTSALNWVE-NMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLRTSG 471
Query: 460 CLDFSAYSLLIKTYIAAGKLASDMRQ 485
C+D AY L++TY+AAGK + +RQ
Sbjct: 472 CIDGKAYESLLRTYLAAGKTSRSIRQ 497
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 279/449 (62%), Gaps = 9/449 (2%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY +L G++ V +LN ++ K V K + ++ LR Y+ AL++ E M
Sbjct: 22 EEALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGDTLKKLRDRKLYQPALKLSETM 81
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M + +D A++LDL AK GI AAE YF L E +KN YGALLNCYCKELMTE+
Sbjct: 82 AKRNMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPSKNHLCYGALLNCYCKELMTEK 141
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
+ L EKM EL +++ +N+L T+Y ++GQPEK+ L+ +MK N+ LD+ TY VWM+
Sbjct: 142 SEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLIQEMKASNVMLDSYTYNVWMR 201
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP- 281
+ + +NDI GVERV EM + WTTYSNLASI+V A LF+KAE+ALK+LE+
Sbjct: 202 ALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFDKAEVALKELEKRNAF 261
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQC 340
+D AY FLI+LY T NL V RVW L+ FP T N SYL ++Q L L + ++C
Sbjct: 262 KDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKC 321
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR-ANASARFFKSRESFMIY 399
F EWE C +YD+R+A+V+IRAY++ DM E+A + A++R A +A K+ E FM Y
Sbjct: 322 FREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRGAKPNA---KTLEIFMDY 378
Query: 400 YLRSRQLDLALNEMEAALSEAKQF--HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL-K 456
YL LA++ + A+S + W P + R FE+EKDVDGAEEF ++L K
Sbjct: 379 YLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFEQEKDVDGAEEFLEILKK 438
Query: 457 SLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
S+ + LI+TY AAG+++S M++
Sbjct: 439 SVESPGVEVFESLIRTYAAAGRISSAMQR 467
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/449 (43%), Positives = 281/449 (62%), Gaps = 9/449 (2%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY RL G++ SV LN ++ K V K + V+ LR R+ AL++ E M
Sbjct: 21 EEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETM 80
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M+ + +D A+YLDL KT G+AAAE YF L E +KN TYGALLNCYCKEL+TE+
Sbjct: 81 AKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEK 140
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A AL E+M ELK +++ +N+L T+Y ++GQPEK+ ++ ++K +I D+ TY +WM+
Sbjct: 141 AEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMR 200
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP- 281
+ + +NDI GVERV EM + WTTYSNLASIYV A +FEKAE ALK+LE+
Sbjct: 201 ALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNAC 260
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQC 340
RD A+ FLI+LY NL V RVW L+ FP T N SYL ++Q L L + ++C
Sbjct: 261 RDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKC 320
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR-ANASARFFKSRESFMIY 399
F EWES CS YD+R+A+ +I AY + + E+A + +A++R A +A K+ E F+ Y
Sbjct: 321 FREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNA---KTWEIFLAY 377
Query: 400 YLRSRQLDLALNEMEAALSEAK--QFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKS 457
+L++R++ A++ + A+S + W P + F + FE+EKDVDGAE F ++LKS
Sbjct: 378 HLKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFEQEKDVDGAEGFLEILKS 437
Query: 458 -LNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ L + LI+ Y AAG+ + MR+
Sbjct: 438 TVEDLGVEVFESLIRIYAAAGRTSPVMRR 466
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 196/446 (43%), Positives = 274/446 (61%), Gaps = 11/446 (2%)
Query: 46 LYKRLSALGATG-GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-E 103
LY+RLSALG G GSV+ LN ++ EG R + L V+ LRK+ R+ HALEV++WM
Sbjct: 66 LYRRLSALGIAGEGSVSRVLNKWVREGGAPRSEELVKHVKELRKYKRHAHALEVMDWMVN 125
Query: 104 SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
+R M+ S T+ A+ LDL K G+ AAE YF L + AKN TYGALL+CYC M E+A
Sbjct: 126 ARGMNMSITNHAIRLDLIYKVRGLEAAENYFANLPDPAKNHRTYGALLSCYCSAKMEEKA 185
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
L+ +MDEL F T+ NNL ++Y++L Q KV L +MK +NI D+LT + M S
Sbjct: 186 TYLYRQMDELGFWSGTLPINNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCCILMTS 245
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KP 281
Y+ N ID +E + EM E + W+ YS LASIYV A EKAE ALKKLE +
Sbjct: 246 YAASNKIDAIEELLKEMV-EKDVSLGWSAYSTLASIYVNAGQVEKAESALKKLEGLIGAE 304
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQC 340
R+ + FL+SLY + NL +NRVW ++K+ F TN SYL +L AL KLN ID +KQ
Sbjct: 305 DGRQPFDFLMSLYASLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLNDIDRMKQI 364
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF-FKSRESFMIY 399
+ EWES +YD+RL +++IR +L+ M EEA + AK++ F K+ E F+ +
Sbjct: 365 YMEWESNYQTYDVRLTNMMIRGHLRLGMSEEAETLREKAKEKG---VEFDSKTCELFLDH 421
Query: 400 YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
Y+ ++ ALN +E +++ + + Q + F ++FEE KD D AE FC L+ L
Sbjct: 422 YMGKGDMNSALNWVE-NMTKLPKKAGKLDQDRIYKFQKYFEEHKDADSAERFCNCLRMLG 480
Query: 460 CLDFSAYSLLIKTYIAAGKLASDMRQ 485
C+D AY L++TY+AAGK + +RQ
Sbjct: 481 CIDGKAYESLLRTYLAAGKKSCSLRQ 506
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/448 (42%), Positives = 278/448 (62%), Gaps = 7/448 (1%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY RL G++ SV LN ++ K V K + ++ LR Y A+++ E M
Sbjct: 22 EEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGDTIKKLRSRNLYYPAVKLSETM 81
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
SR M+ + +D A++LDL AKT GI AAE YF L E +KN TYGALLNCYCKELMTE
Sbjct: 82 SSRGMNKTVSDQAIHLDLVAKTRGIPAAENYFIDLPETSKNLRTYGALLNCYCKELMTEE 141
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A AL EKM EL +++++N+L T+Y ++GQPE++ ++ +MK N+ D+ TY VWM+
Sbjct: 142 AEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQEMKADNVMPDSYTYNVWMR 201
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP- 281
+ + +NDI GVERV EM + WTTYSNLASIYV A F+KAE ALK+LE++
Sbjct: 202 ALAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYVDAGYFDKAEKALKELEKINAN 261
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQC 340
+D A+ FLI+LY T L V R+W L+ FP T N SYL ++Q L L + ++C
Sbjct: 262 KDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANISYLNMIQVLVNLKDVPGAEKC 321
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY 400
F EWES CS+YD+R+A+V+I AY ++ + ++A + A++R K+ E F YY
Sbjct: 322 FREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERARRRGAKPNS--KTWEIFCDYY 379
Query: 401 LRSRQLDLALNEMEAALSEAKQF--HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL-KS 457
L++ + L ++ + A+S + W P V V + FE++KDVDGAE+ ++L K+
Sbjct: 380 LKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFEQQKDVDGAEDLIEILKKA 439
Query: 458 LNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
++ + + LI+TY AAG+ + MR+
Sbjct: 440 VDDVAVEVFESLIRTYAAAGRKSQLMRR 467
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 189/449 (42%), Positives = 276/449 (61%), Gaps = 9/449 (2%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY RL G++ V LN ++ K V K + ++ LR G Y AL++ E M
Sbjct: 22 EEALYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTLKKLRSRGLYYPALKLSEAM 81
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M+ + +D A++LDL AKT GI AAE +F L E +KN TYGALLNCYC +LMTE
Sbjct: 82 SKRGMNKTVSDQAIHLDLVAKTRGIPAAEIFFIDLPETSKNHLTYGALLNCYCNQLMTEE 141
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A AL EKM EL +++++N+L T+Y ++GQPE++ ++ +MK +I D+ TY VWM+
Sbjct: 142 AEALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQEMKSDSIMPDSYTYNVWMR 201
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-P 281
+ + +NDI G ERV EM + WTTYSNLASIYV A+LFEKAE LK+LE+
Sbjct: 202 ALAAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYVDAQLFEKAEKTLKELEKRNVH 261
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQC 340
RD A+ FLI+LY NL + R+W L+ FP T N SYL ++Q L L + ++C
Sbjct: 262 RDHSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNISYLNMIQVLVNLKDLPGAEKC 321
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR-ANASARFFKSRESFMIY 399
F EWES CS YD+R+A+V+I+AY +K + E+A + A R A +A K+ E F Y
Sbjct: 322 FREWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGRGAKPNA---KTWEIFSDY 378
Query: 400 YLRSRQLDLALNEMEAALSEAK--QFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL-K 456
Y + + L++ + A+S+ + W P V +F FE++KDVDGAE F ++L K
Sbjct: 379 YFENGDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQQKDVDGAEGFIEILKK 438
Query: 457 SLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ + ++ + + LI+TY AAG+ + +R+
Sbjct: 439 ATDDVEANVFESLIRTYAAAGRTSQVLRR 467
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 191/445 (42%), Positives = 272/445 (61%), Gaps = 8/445 (1%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY RL G + SV LN +I K V K + +R LR Y AL++ E M
Sbjct: 24 EEALYIRLFKDGGSEKSVRLQLNKFIKSHKRVFKWEVGDTLRKLRDRKLYYPALKLSEIM 83
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M+ + +D A++LDL AK GI AAE YF L E +KN +Y +LLNCYCKEL+TE+
Sbjct: 84 AKRGMNKTVSDQAIHLDLVAKARGIDAAENYFVSLPESSKNHLSYSSLLNCYCKELLTEK 143
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A ALFEK+ EL V +N+L T+Y ++G+P+KV ++ +MK N++ D TYIVWM+
Sbjct: 144 AEALFEKIKELNLPVTPVPYNSLMTLYSKIGRPDKVCTIIQEMKAANVTFDPYTYIVWMR 203
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP- 281
+ + LNDI GVERV EM + K WTTYSNLASIYV A +FEKA ALK LE++
Sbjct: 204 ALAALNDISGVERVIDEMKRDGV-KGDWTTYSNLASIYVNANMFEKAAKALKDLEKINTR 262
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQC 340
RD + FLI+LY +L V RVW L+ FP T N SYL ++Q L KL + ++C
Sbjct: 263 RDLIGFQFLITLYGQIGDLTEVYRVWRSLRLAFPRTANISYLNMIQTLTKLKDLPGAEKC 322
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR-ANASARFFKSRESFMIY 399
F+EWES +YD+R+ + +I AY + + E+A + A +R A +A K+ E F+ Y
Sbjct: 323 FKEWESGSPTYDIRIPNALIGAYTKGGLLEKAMALKERALRRGARPNA---KTWEFFLNY 379
Query: 400 YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL-KSL 458
YL++ LA + + A+ + + W P + +F FE+EKDVDGAE F +++ K++
Sbjct: 380 YLKNGDFKLAGDCVAKAIGKGDRGKWIPSPEIIKSFMSHFEQEKDVDGAESFLEIVKKTV 439
Query: 459 NCLDFSAYSLLIKTYIAAGKLASDM 483
+ L+ + LI+TY AAG+ +S M
Sbjct: 440 DSLESEVFESLIRTYSAAGRTSSSM 464
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 188/449 (41%), Positives = 267/449 (59%), Gaps = 9/449 (2%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY RL G T V LN ++ K V K + ++ LR G Y AL++ E M
Sbjct: 22 EEPLYHRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM 81
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
E R M+ + +D A++LDL AK GI A E YF L E +K TYG+LLNCYCKEL+TE+
Sbjct: 82 EERGMNKTVSDQAIHLDLVAKARGITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEK 141
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A L KM EL +++++N+L T+Y + GQ EKV ++ ++K N+ D+ TY VWM+
Sbjct: 142 AEGLLNKMKELNITPSSMSYNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSYTYNVWMR 201
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-- 280
+ + NDI GVERV EM + WTTYSN+ASIYV A L +KAE AL++L EMK
Sbjct: 202 ALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQEL-EMKNT 260
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
RD AY FLI+LY L V R+W L+ P T N +YL ++Q L KLN + +
Sbjct: 261 QRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLNDLPGAET 320
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY 399
F+EW++ CS+YD+R+ +V+I AY ++ + E+A + A +R + K+ E FM Y
Sbjct: 321 LFKEWQANCSTYDIRIVNVLIGAYAKEGLIEKAKELKEKAPRRGGKAN--AKTWEIFMDY 378
Query: 400 YLRSRQLDLALNEMEAALSEAK--QFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKS 457
Y++S + AL M A+S K W P Q TV T +FE++KDV+GAE ++LK+
Sbjct: 379 YVKSGDMAHALECMSKAVSIGKGDGGKWIPSQETVRTLMSYFEQKKDVNGAENLLEILKN 438
Query: 458 -LNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ + + LI+TY AAGK MR+
Sbjct: 439 GTDNIGAEIFESLIRTYAAAGKSHPAMRR 467
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 186/452 (41%), Positives = 265/452 (58%), Gaps = 15/452 (3%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY RL G T V LN ++ K V K + ++ LR G Y AL++ E M
Sbjct: 22 EEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM 81
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
E R M+ + +D A++LDL AK I A E YF L E +K TYG+LLNCYCKEL+TE+
Sbjct: 82 EERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEK 141
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A L KM EL +++++N+L T+Y + G+ EKV ++ ++K N+ D+ TY VWM+
Sbjct: 142 AEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMR 201
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-- 280
+ + NDI GVERV EM + WTTYSN+ASIYV A L +KAE AL++L EMK
Sbjct: 202 ALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQEL-EMKNT 260
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
RD AY FLI+LY L V R+W L+ P T N +YL ++Q L KLN + +
Sbjct: 261 QRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAET 320
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA---NASARFFKSRESF 396
F+EW++ CS+YD+R+ +V+I AY Q+ + ++A + A +R NA K+ E F
Sbjct: 321 LFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNA-----KTWEIF 375
Query: 397 MIYYLRSRQLDLALNEMEAALSEAK--QFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
M YY++S + AL M A+S K W P TV +FE++KDV+GAE ++
Sbjct: 376 MDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEI 435
Query: 455 LKS-LNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
LK+ + + + LI+TY AAGK MR+
Sbjct: 436 LKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRR 467
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 195/500 (39%), Positives = 268/500 (53%), Gaps = 62/500 (12%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY+RL G+T +V ++ ++ K K + CVR +R+ YR +L++ E M
Sbjct: 78 EEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPSLKLSEVM 137
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M+ + +D A+ LDL AK+ GIAAAEKYF L E +K TYGALLN YCKELMTE+
Sbjct: 138 ARRGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEK 197
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A +L EKM EL F ++FN+L TMY ++ Q EKV ++ MK ++ D TY VWM+
Sbjct: 198 AESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMR 257
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-P 281
+ + L DI GVERV EM + WTTYSNLASIYV+A +FEKAE ALK+LE+
Sbjct: 258 ALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNTS 317
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQC 340
D +AY FLI+LY T NL V+RVW LK P N SYL ++Q LA L + + C
Sbjct: 318 NDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEAC 377
Query: 341 FEEWESR-------------------------------------------------CSSY 351
F+EWE+R Y
Sbjct: 378 FKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPKHPKY 437
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAKKRA---NASARFFKSRESFMIYYLRSRQLDL 408
D+R+A+ +I+AY+ + M ++A + AK R NA K+ E FM +YL++ L +
Sbjct: 438 DIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNA-----KTWEIFMEHYLKTGDLKM 492
Query: 409 ALNEMEAALSEAKQFH--WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSA 465
A + A+ + W P +T +FEE KDVDGAE + LK + L
Sbjct: 493 AHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAPV 552
Query: 466 YSLLIKTYIAAGKLASDMRQ 485
+ L++TY AAGK MRQ
Sbjct: 553 FEPLVRTYAAAGKKFPGMRQ 572
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 195/500 (39%), Positives = 268/500 (53%), Gaps = 62/500 (12%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY+RL G+T +V ++ ++ K K + CVR +R+ YR +L++ E M
Sbjct: 18 EEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPSLKLSEVM 77
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M+ + +D A+ LDL AK+ GIAAAEKYF L E +K TYGALLN YCKELMTE+
Sbjct: 78 ARRGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEK 137
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A +L EKM EL F ++FN+L TMY ++ Q EKV ++ MK ++ D TY VWM+
Sbjct: 138 AESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMR 197
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-P 281
+ + L DI GVERV EM + WTTYSNLASIYV+A +FEKAE ALK+LE+
Sbjct: 198 ALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNTS 257
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQC 340
D +AY FLI+LY T NL V+RVW LK P N SYL ++Q LA L + + C
Sbjct: 258 NDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEAC 317
Query: 341 FEEWESR-------------------------------------------------CSSY 351
F+EWE+R Y
Sbjct: 318 FKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPKHPKY 377
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAKKRA---NASARFFKSRESFMIYYLRSRQLDL 408
D+R+A+ +I+AY+ + M ++A + AK R NA K+ E FM +YL++ L +
Sbjct: 378 DIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNA-----KTWEIFMEHYLKTGDLKM 432
Query: 409 ALNEMEAALSEAKQFH--WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSA 465
A + A+ + W P +T +FEE KDVDGAE + LK + L
Sbjct: 433 AHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAPV 492
Query: 466 YSLLIKTYIAAGKLASDMRQ 485
+ L++TY AAGK MRQ
Sbjct: 493 FEPLVRTYAAAGKKFPGMRQ 512
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 267/456 (58%), Gaps = 10/456 (2%)
Query: 33 AAPTPFP-TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGR 91
A+P P G LY RLSA +GG V L ++ E + + ++ + +CVR RKF +
Sbjct: 29 ASPERRPLDGARWALYARLSAHLPSGGMVE-ELGRWLRERRPLSEEQVLFCVRRFRKFKQ 87
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL 151
+HAL++++WME+R ++ A+ LDL +K NGI AAE+YF L + +++ TY LL
Sbjct: 88 NKHALQLMDWMEARGVNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLL 147
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
NCY + M E+ L L+E M + + + + +NNL +YL+ QPEK+ V +M++ I
Sbjct: 148 NCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQ 207
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
+ +Y V +SY +NDI+ E+V E+ + + W+ Y+ LA+ Y K + F+KAE
Sbjct: 208 PNKFSYFVLTESYIMMNDIESAEKVLKEL--QEVNSVPWSLYATLANGYNKLQQFDKAEF 265
Query: 272 ALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALA 329
LKK EE + D ++H L+S Y N+ NL V R+W LKS F TN SYLV+L+AL
Sbjct: 266 TLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALK 325
Query: 330 KLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF 389
KL+ D L+Q F+EWES YDM++ ++II+AYL K M ++A + + +++ R
Sbjct: 326 KLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQDHSNYRT 385
Query: 390 FKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAE 449
F F +YL +++ AL + A K W P ++ V+ + + FE+ KDVDG E
Sbjct: 386 FC---IFAEFYLEKSKMNEALQVWKDAKKMVKGQDWVPEKL-VNRYLKHFEDSKDVDGME 441
Query: 450 EFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
FC+ LK+L LD AY LI+TYI+ G+ + Q
Sbjct: 442 TFCECLKNLGRLDAEAYEALIRTYISVGRTNPSIPQ 477
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 196/500 (39%), Positives = 268/500 (53%), Gaps = 62/500 (12%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY+RL G+T +V ++ ++ K K + CVR +R+ YR AL++ E M
Sbjct: 18 EEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPALKLSEVM 77
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M+ + +D A+ LDL AK+ GIAAAEKYF L E +K TYGALLN YCKELMTE+
Sbjct: 78 TRRGMNPTVSDQAICLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEK 137
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A +L KM EL F + FN+L TMY ++ QPEKV ++ MK ++ TY VWM+
Sbjct: 138 AESLMAKMSELNFAFTAMPFNSLMTMYTKVNQPEKVPGIIQYMKADDVLPHVFTYNVWMR 197
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-P 281
+ + LNDI GVERV EM + WTTYSNLASIYV A LFEKAE ALK+LE+
Sbjct: 198 ALAALNDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVDAGLFEKAEAALKELEKRNTS 257
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQC 340
D +AY FLI+LY T NL V+RVW LK P N SYL ++Q LA L + + C
Sbjct: 258 NDVEAYQFLITLYGRTQNLVEVHRVWRSLKRNNPRMANMSYLNMIQVLANLKDLPAAEAC 317
Query: 341 FEEWESR-------------------------------------------------CSSY 351
F+EWE+R Y
Sbjct: 318 FKEWEARHIHPPKTKAKDSGADNISTTDPESSSNLPNNQSGIKETGDEAAKDLQLKHPKY 377
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAK---KRANASARFFKSRESFMIYYLRSRQLDL 408
D+R+A+ +I+AY+ + M ++A + AK R NA K+ E FM ++L++ L +
Sbjct: 378 DIRVANAMIKAYIAEGMLDKAVAVKKRAKMHGGRLNA-----KTWEIFMEHHLKTGDLKM 432
Query: 409 ALNEMEAALSEAKQFH--WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSA 465
A + A+ + W P +T +FEE KDVDGAE++ + LK + L
Sbjct: 433 AHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAEQYVESLKKVQKDLGTPV 492
Query: 466 YSLLIKTYIAAGKLASDMRQ 485
+ L++TY AAGK MRQ
Sbjct: 493 FEPLLRTYAAAGKKFPGMRQ 512
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 194/488 (39%), Positives = 267/488 (54%), Gaps = 50/488 (10%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
++ LY+RL G+T +V ++ ++ K K + CVR LRK YR AL++ E M
Sbjct: 18 DEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYRPALKLSEVM 77
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M+ + +D A+ LDL AK+ GIAAAEKYF L E +K TYGALLNCYCK+LMTE+
Sbjct: 78 ARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEK 137
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A AL KM EL F + +N+L T+Y ++ Q EKV ++ MK ++ D TY VWM+
Sbjct: 138 AEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMR 197
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-P 281
+ + DI GVERV EM + WTTYSNLASIYV A LFEKAE ALK+LE+
Sbjct: 198 ALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEKWNTS 257
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQC 340
D +AY FLI+LY T NL V+RVW LK P N SYL ++QALA L + + C
Sbjct: 258 NDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEAC 317
Query: 341 FEEWES-------------------------------------RCSSYDMRLADVIIRAY 363
F+EWE+ + YD+R+A+ +I+AY
Sbjct: 318 FKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAMIKAY 377
Query: 364 LQKDMYEEAALIFNNAKKRA---NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEA 420
+ + M+++A + AK R NA K+ E FM +YL+ L + + A+ +
Sbjct: 378 ITEGMFDKAVAVKKRAKMRGGRLNA-----KTWEIFMEHYLKEGDLKMVHWCADRAIKKG 432
Query: 421 KQFH--WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAG 477
W P +T +FE+ KDVDGAE+F +VLK + L + L++TY AAG
Sbjct: 433 HSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEPLVRTYAAAG 492
Query: 478 KLASDMRQ 485
K MR
Sbjct: 493 KKLPGMRH 500
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 193/488 (39%), Positives = 266/488 (54%), Gaps = 50/488 (10%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
++ LY+RL G+T +V ++ ++ K K + CVR LRK YR AL++ E M
Sbjct: 18 DEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYRPALKLSEVM 77
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M+ + +D A+ LDL AK+ GIAAAEKYF L E +K TYGALLNCYCK+LMTE+
Sbjct: 78 ARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEK 137
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A AL KM EL F + +N+L T+Y ++ Q EKV ++ MK ++ D TY VWM+
Sbjct: 138 AEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMR 197
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-P 281
+ + DI GVERV EM + WTTYSNLASIYV A LFEKAE ALK+LE+
Sbjct: 198 ALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEKWNTS 257
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQC 340
D +AY FLI+LY T NL V+RVW LK P N SYL ++QALA L + + C
Sbjct: 258 NDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEAC 317
Query: 341 FEEWES-------------------------------------RCSSYDMRLADVIIRAY 363
F+EWE+ + YD+R+A+ +I+ Y
Sbjct: 318 FKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAMIKEY 377
Query: 364 LQKDMYEEAALIFNNAKKRA---NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEA 420
+ + M+++A + AK R NA K+ E FM +YL+ L + + A+ +
Sbjct: 378 ITEGMFDQAVAVKKRAKMRGGRLNA-----KTWEIFMEHYLKEGDLKMVHWCADRAIKKG 432
Query: 421 KQFH--WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAG 477
W P +T +FE+ KDVDGAE+F +VLK + L + L++TY AAG
Sbjct: 433 HSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEPLVRTYAAAG 492
Query: 478 KLASDMRQ 485
K MR
Sbjct: 493 KKLPGMRH 500
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 194/499 (38%), Positives = 267/499 (53%), Gaps = 59/499 (11%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY+RL G+T +V ++ ++ K K + CVR LR+ YR AL++ E M
Sbjct: 18 EEALYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRRQELYRPALKLTEVM 77
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M+ + D A+ LDL AK+ GIAAAEKYF L E +K TYGALLNCYCKE MTE+
Sbjct: 78 ARRGMNPTVGDQAIRLDLVAKSRGIAAAEKYFMDLPETSKTHLTYGALLNCYCKESMTEK 137
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A AL EKM EL F +++N+L T+Y ++ QPEKV ++ MK ++ D TY VWM+
Sbjct: 138 AEALMEKMKELNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKADDVLPDVYTYNVWMR 197
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-P 281
S + DI GVERV EM + WTTYSNLASIYV+A LFEKAE ALK+LE+
Sbjct: 198 SLAARQDISGVERVIEEMKRDGRVVPDWTTYSNLASIYVEAGLFEKAEAALKELEKRNTS 257
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQC 340
D +AY FLI+LY T NL V+ VW LK P N SYL ++Q LA L + + C
Sbjct: 258 NDLEAYQFLITLYGRTQNLVEVHHVWRSLKRNNPRKANMSYLNMIQVLANLKDLPAAEAC 317
Query: 341 FEEWESR--------------------------------------------------CSS 350
F+EWE+R
Sbjct: 318 FKEWEARYIRPPKTKAIDAVTTETSKLDQESSTTNASNNDSDAKGTEDKGMEEIDMKHPK 377
Query: 351 YDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF-FKSRESFMIYYLRSRQLDLA 409
YD+R+A+ +++AY+ + M ++A + AK R R K+ E FM +Y++ L A
Sbjct: 378 YDIRVANALMKAYVTEGMLDKAVALKKRAKMRG---GRLNSKTWEIFMEHYIKVGDLKNA 434
Query: 410 LNEMEAALSEAKQFH--WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAY 466
+ A+ + W P + +T +FE++KDVDGAE+F +VLK + L +
Sbjct: 435 HWCTDRAIKKGHSSGRIWVPPRDVTETLMGYFEKKKDVDGAEKFVEVLKKVQKDLGTVVF 494
Query: 467 SLLIKTYIAAGKLASDMRQ 485
L++TY AAGK MR
Sbjct: 495 EPLVRTYAAAGKKFPGMRH 513
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/379 (44%), Positives = 243/379 (64%), Gaps = 6/379 (1%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E+ LY RL G++ SV LN ++ K V K + V+ LR R+ AL++ E M
Sbjct: 21 EEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETM 80
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R M+ + +D A+YLDL KT G+AAAE YF L E +KN TYGALLNCYCKEL+TE+
Sbjct: 81 AKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEK 140
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A AL E+M ELK +++ +N+L T+Y ++GQPEK+ ++ ++K +I D+ TY +WM+
Sbjct: 141 AEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMR 200
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP- 281
+ + +NDI GVERV EM + WTTYSNLASIYV A +FEKAE ALK+LE+
Sbjct: 201 ALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNAC 260
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQC 340
RD A+ FLI+LY NL V RVW L+ FP T N SYL ++Q L L + ++C
Sbjct: 261 RDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKC 320
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR-ANASARFFKSRESFMIY 399
F EWES CS YD+R+A+ +I AY + + E+A + +A++R A +A K+ E F+ Y
Sbjct: 321 FREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNA---KTWEIFLAY 377
Query: 400 YLRSRQLDLALNEMEAALS 418
+L++R++ A++ + A+S
Sbjct: 378 HLKNREMKQAVDCVANAIS 396
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 247/442 (55%), Gaps = 9/442 (2%)
Query: 41 GNEDKLYKRLSAL--GATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
G +LY RLS L A G + L+ ++ E + + + L VR LR + Y+ ALE+
Sbjct: 80 GAWARLYTRLSTLPPDAPLGCLAAELDQWLRERRPLSEQQLFSYVRKLRSYRHYKRALEL 139
Query: 99 IEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL 158
++WME+R AV L L K NG+ AAE+YF L E K+ TY +LLNCY +
Sbjct: 140 MDWMEARGASLQLGHHAVRLGLVCKVNGLEAAEEYFWSLPEMFKSIKTYSSLLNCYAEHR 199
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
++ L LFEKM + +T+ +NNL +YL+ QPEK+ QM++ ++ D+ TY
Sbjct: 200 KADKGLELFEKMKAMNITPSTLVYNNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYY 259
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
+ QSY +ND+ E+ E+ E W+ Y+ LA+ Y K F+KA LALKK EE
Sbjct: 260 MLTQSYIMVNDLKSAEKFVEEL--EKSTPVPWSLYTVLANNYNKLAQFDKAVLALKKAEE 317
Query: 279 MKPRDR-KAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDI 336
+ R A+H L+SLY ++ N V RVW LKS F N SYLV+L AL KL+ D
Sbjct: 318 VMDRSEISAWHNLLSLYASSGNSSEVKRVWESLKSAFTKCINRSYLVMLSALKKLDDFDS 377
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESF 396
L+Q F+EWES YDMR+ +V+I AYL KDM +EA + A + +++ F F
Sbjct: 378 LQQLFQEWESTHERYDMRITNVMIEAYLAKDMTDEAEALRQTAMAKGHSNVTTFY---IF 434
Query: 397 MIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
++ YL + AL+ A K +W P + V F + FEE KDVDG E F + LK
Sbjct: 435 VVSYLEKSRTSEALDIWRDAEKMVKTPNWVPPKELVTRFLKHFEEAKDVDGMEAFWEHLK 494
Query: 457 SLNCLDFSAYSLLIKTYIAAGK 478
L CLD AY LI+TY AAG+
Sbjct: 495 KLGCLDAEAYGALIRTYAAAGR 516
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 182/474 (38%), Positives = 260/474 (54%), Gaps = 27/474 (5%)
Query: 17 VRQLCSTPTETVSQRIAAPTPFPTGNEDK-----LYKRLSAL--GATGGSVTGALNAYIM 69
+R++ P +V TP G E + LYKRLS L A G V L+ ++
Sbjct: 10 LRRVSPAPAGSVH------TPHRRGPELQAAWVPLYKRLSKLPPAAPLGCVAAELDRWLC 63
Query: 70 EGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA 129
E K + L + VR LR F ++R ALE+++WME+R + D A+ LDL NG+ A
Sbjct: 64 ERKPLCGHQLLFYVRKLRNFRQHRRALELMDWMEARGANLLPGDHALRLDLICTVNGLEA 123
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
AE+YF L + K+ TY +LL+CY E E+AL L+EKM + + NT+ + NL ++Y
Sbjct: 124 AEEYFLSLPDMYKSVKTYSSLLHCYA-EHKAEKALELYEKMRTMNIVPNTLVYKNLMSLY 182
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR 249
L+ GQPEK+ +M+ + DN TY + +S+ LN ++ E+ ++ E
Sbjct: 183 LKTGQPEKILQTFEEMRANGVRTDNFTYYMLTESHIMLNGLESTEKFLEDL--EKSIPVH 240
Query: 250 WTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK-AYHFLISLYCNTSNLDAVNRVWG 308
W+ Y+ LA Y K F+KA L LKK EE+ R A+H L+SLY ++ NL V RVW
Sbjct: 241 WSLYTRLADSYNKVGQFDKAGLTLKKAEEVMDRGEMFAWHNLLSLYASSGNLSEVKRVWS 300
Query: 309 ILKSTFP-PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
L+S +N SYLV+L AL KL+ D ++Q F+EWE SYDMR+ +V+I+AYL KD
Sbjct: 301 SLRSELKISSNRSYLVMLSALKKLDDFDCMQQVFQEWELTQESYDMRIPNVMIKAYLAKD 360
Query: 368 MYEEAALIFNNAKKRANASARFFKSRESFMIY---YLRSRQLDLALNEMEAALSEAKQFH 424
M +EA + R A A+ + +F I+ YL + + AL A K +
Sbjct: 361 MTDEAEAL------RQTAMAQGHSNPLTFYIFTESYLEKSRTEAALEVWRDAGKMVKTPN 414
Query: 425 WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGK 478
W P V F + FEE KDVDG E FC L+ L CLD A L +TY+AAG+
Sbjct: 415 WAPPPELVKRFLKHFEEAKDVDGMESFCACLEKLECLDTDARDALSRTYVAAGR 468
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 195/530 (36%), Positives = 268/530 (50%), Gaps = 92/530 (17%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALE----- 97
E+ LY+RL G+T +V ++ ++ K K + CVR +R+ YR +L+
Sbjct: 78 EEALYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPSLKPEQMQ 137
Query: 98 -------------------------VIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEK 132
+ E M R M+ + +D A+ LDL AK+ GIAAAEK
Sbjct: 138 NTTPSQARGRCLGRAYALVQDCRLVLSEVMARRGMNPTVSDQAIRLDLIAKSRGIAAAEK 197
Query: 133 YFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
YF L E +K TYGALLN YCKELMTE+A +L EKM EL F ++FN+L TMY ++
Sbjct: 198 YFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKV 257
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT 252
Q EKV ++ MK ++ D TY VWM++ + L DI GVERV EM + WTT
Sbjct: 258 NQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTT 317
Query: 253 YSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
YSNLASIYV+A +FEKAE ALK+LE+ D +AY FLI+LY T NL V+RVW LK
Sbjct: 318 YSNLASIYVEAGMFEKAEAALKELEKRNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLK 377
Query: 312 STFPP-TNTSYLVLLQALAKLNAIDILKQCFEEWESR----------------------- 347
P N SYL ++Q LA L + + CF+EWE+R
Sbjct: 378 RDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPK 437
Query: 348 --------------------------CSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
YD+R+A+ +I+AY+ + M ++A + AK
Sbjct: 438 SPSNPPNNQSGTKETGDETAEDLQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKM 497
Query: 382 RA---NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFH--WRPMQVTVDTFF 436
R NA K+ E FM +YL++ L +A + A+ + W P +T
Sbjct: 498 RGGRLNA-----KTWEIFMEHYLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLM 552
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKLASDMRQ 485
+FEE KDVDGAE + LK + L + L++TY AAGK MRQ
Sbjct: 553 SYFEENKDVDGAERYVGALKKVQKDLGAPVFEPLVRTYAAAGKKFPGMRQ 602
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 260/459 (56%), Gaps = 9/459 (1%)
Query: 27 TVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSL 86
TVS A D LY+R+S LG S L +I EG+ V+K +L VR L
Sbjct: 77 TVSTEAVATQKTSESLPDNLYRRISRLGDPKRSAVEELERWITEGREVKKWVLREIVREL 136
Query: 87 RKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYT 146
RK+ R++HALEV EWM S+K S D A++L L AK +GIA+AEKY+ L Y KN T
Sbjct: 137 RKYYRHKHALEVFEWM-SKKFPCSVGDRAMHLGLIAKVHGIASAEKYYVDLHHYEKNHLT 195
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y ALLNCY +E E++ A+ E++ +L F+ + + T+Y+ Q EKV ++ +MK
Sbjct: 196 YFALLNCYVQEKNIEKSEAIMEELKDLGFIKTAFPYTEMMTLYMNTEQFEKVPLVIQEMK 255
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
++ ISLD Y +WM+SY+ L+D+D V VF E+ + W+ YS LA+IY+ A++
Sbjct: 256 KKGISLDIHCYNIWMRSYAALSDMDQVAEVFNEIERDDNINTDWSIYSTLANIYINAKVL 315
Query: 267 EKAELALKKLE-EMK----PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTS 320
+KA ALK++E +MK +D+ AY+ LISL+ N D V R+W + FP TN S
Sbjct: 316 DKAGSALKEMENKMKEIETKKDQLAYNHLISLHGRLGNKDEVYRIWQSFELAFPKMTNRS 375
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y+ LL +L + I+ + ++WES + D R+ ++ AY++K ++A L+
Sbjct: 376 YVCLLSSLVGMGDIEGAEVFIKKWESMKTFDDSRIYYALLNAYIEKGWLQKAELLLERVV 435
Query: 381 KRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFE 440
+ K+ E+ Y+++ Q+ A+ M+ +LS W+P V V + FE
Sbjct: 436 DKGGKPNA--KTWETLAEGYIQNEQIHKAMEAMKRSLSIEGNSPWQPKSVNVLALLKHFE 493
Query: 441 EEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
++ DV AEEF K+L+ + + Y+ L++TY+ GK+
Sbjct: 494 KQGDVKSAEEFFKILRGVKFVSTEIYNSLLRTYVYVGKV 532
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 225/361 (62%), Gaps = 6/361 (1%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL 151
Y AL++ + M + M+ + +D A++LDL KT+G+AAAE YF L E +KN YGALL
Sbjct: 1 YYAALKLSDTMAWKGMNMTISDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGALL 60
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
N YCKEL+ ++A AL EKM EL +++N+L T+Y + G PEKV LV +MK +I
Sbjct: 61 NIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIM 120
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
L TY VWM++ + + DI GVERV EM + WTTYSNLASIYV++++FEKAE
Sbjct: 121 LQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFEKAEN 180
Query: 272 ALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALA 329
ALK+LE+ +D Y FL++LY T NL V RVW L+ FP T N +YL ++Q L
Sbjct: 181 ALKELEKRNTSQDLSPYQFLLTLYGKTGNLIEVYRVWRSLRLAFPKTPNVAYLNMIQRLV 240
Query: 330 KLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF 389
L + ++CF +WES C++YD+R+A+V++ AY++ + ++A + A KR +
Sbjct: 241 TLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGLLQQAKELKKRACKR--GAKPN 298
Query: 390 FKSRESFMIYYLRSRQLDLALN--EMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDG 447
K+ E F+ +YL++ ++ LA++ E A+ W P V++ FE+ KDVDG
Sbjct: 299 AKTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSSKVVNSIMGHFEQSKDVDG 358
Query: 448 A 448
A
Sbjct: 359 A 359
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 254/468 (54%), Gaps = 19/468 (4%)
Query: 28 VSQRIAAPTPFPTGNEDK--------LYKRLSAL--GATGGSVTGALNAYIMEGKTVRKD 77
++ +A P G E + LYKR+S + G G+V ++ ++ + + +
Sbjct: 25 LAHELAQPQAQSAGPERRGLEPAWVPLYKRISKVSQGKPPGTVAAEMDEWLRQRRRPSQL 84
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+ VR L +F + ALE+++WMESR + S A+ LDL +K +GI AAE+YF +
Sbjct: 85 QVLAYVRELTRFKKNESALELLDWMESRGANLSPGHQAMRLDLISKVHGIQAAEEYFWSI 144
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
+ +K+ TY LLNCY K + + L +EKM + + + +N L +Y + GQPEK
Sbjct: 145 PDISKSVKTYSCLLNCYGKHGLAYKGLEFYEKMKAKSIVPDKLVYNYLMILYQKAGQPEK 204
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+ +M++ IS D Y ++SY +ND+D E+V E+ W+ Y+ +A
Sbjct: 205 ILSTFEEMRESGISADKFAYFTLIESYITMNDLDAAEKVLAELQKVA--PVHWSLYTLMA 262
Query: 258 SIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP 316
+ Y+K +LF KAE+A+KK EE M D ++++ L+SL+ + N V RVW LKSTF
Sbjct: 263 NNYIKLKLFGKAEVAIKKAEEGMDKADLRSWYALLSLHAHCGNSTEVKRVWKSLKSTFKK 322
Query: 317 T-NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
N SYLV+LQAL+ ++ + L+Q F+EW+S YD R+A+V+I+AYL K M +EA I
Sbjct: 323 CLNRSYLVMLQALSMIDDFESLQQIFQEWQSSHEHYDKRIANVVIKAYLDKGMIDEAEAI 382
Query: 376 FNNAKKRANASARFFKSRES-FMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
++ A + + F +YL ++ AL + A + W P + V
Sbjct: 383 ----RQSTMAQGHWHEGMVCIFAEFYLDKSDVNAALEILRDAKNMVMARKWVPSKELVSR 438
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASD 482
F + +EE D GAE F + LK L CLD A+ +TY+ AG+ + D
Sbjct: 439 FLKHYEESNDASGAESFLECLKKLECLDLDAFEAAKQTYVVAGRASDD 486
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 223/361 (61%), Gaps = 6/361 (1%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL 151
Y AL++ + M + M+ + D A++LDL KT+G+AAAE YF L E +KN YGALL
Sbjct: 1 YYAALKLSDTMAWKGMNMTINDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGALL 60
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
N YCKEL+ ++A AL EKM EL +++N+L T+Y + G PEKV LV +MK +I
Sbjct: 61 NIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIM 120
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
L TY VWM++ + + DI GVERV EM + WTTYSNLASIYV++++F+KAE
Sbjct: 121 LQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFDKAEN 180
Query: 272 ALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALA 329
ALK+LE+ R+ Y FL++LY T NL V R+W L+ FP T N +YL ++Q L
Sbjct: 181 ALKELEKRNTSRELSPYQFLLTLYGKTGNLIEVYRLWRSLRLAFPKTPNVAYLNMIQRLV 240
Query: 330 KLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF 389
L + ++CF +WES C++YD+R+A+V++ AY++ ++A + A KR +
Sbjct: 241 TLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGSLQQAKELKKRACKR--GAKPN 298
Query: 390 FKSRESFMIYYLRSRQLDLALN--EMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDG 447
K+ E F+ +YL++ ++ LA++ E A+ W P V++ FE+ KDVDG
Sbjct: 299 AKTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSTNVVNSIMGHFEQSKDVDG 358
Query: 448 A 448
A
Sbjct: 359 A 359
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 241/437 (55%), Gaps = 7/437 (1%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
L+ R+S LG S+ L+ ++ EGK +R L+ +R LR RY AL+V EWM +
Sbjct: 37 LFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQKIIRDLRCHRRYTQALQVSEWMNGK 96
Query: 106 -KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
+ FS D AV LDL + G+ +AE YF L +N TYGALLNCY +E + +++L
Sbjct: 97 GQSGFSPADHAVQLDLIGRVRGLESAESYFQNLVNQDRNDKTYGALLNCYVREGLVDKSL 156
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+KM EL F + + +N+L +Y R GQ EKV ++++MK+ I+ D +Y + M S
Sbjct: 157 YHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVTDVLSEMKENGITPDLFSYRICMSSC 216
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR 284
+ +D+ GVE + EM N+ W TYS +ASIYVKA L EKA + LKK E+ RD
Sbjct: 217 AARSDLKGVEEILEEMENQSHISIDWVTYSTVASIYVKASLKEKALIYLKKCEQKVNRDA 276
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEE 343
Y+ LISL + D V R+WG++K+ N Y+ +L AL KL ++ + +E
Sbjct: 277 LGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVNRDYITMLGALVKLEELEEADKLLQE 336
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEA-ALIFNNAKKRANASARFFKSRESFMIYYLR 402
WES C YD R+ +V++ Y Q+ + E+A A++ + KK+ N + S Y+
Sbjct: 337 WESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKDIVKKQKNPTP---NSWAIIAAGYVN 393
Query: 403 SRQLDLALNEMEAALS-EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+ ++ A N M+ AL+ +A+ WRP + + + E DV+ E F +L++
Sbjct: 394 KQNMEKAFNCMKEALTVQAENKGWRPKANLISSILSWLGENGDVEDVEAFVNLLETKVPK 453
Query: 462 DFSAYSLLIKTYIAAGK 478
D Y LIK YI GK
Sbjct: 454 DREIYHTLIKAYIRGGK 470
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/439 (35%), Positives = 238/439 (54%), Gaps = 13/439 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWME 103
LY+R++ G G A EG+ R D E C R LRKF R+ AL+V +WM
Sbjct: 80 LYRRIAV--GHGRRPVGRTLADWDEGER-RLDKWELCRVARELRKFRRFNLALQVYDWMT 136
Query: 104 SRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R+ FS + D A+ LDL AK G+ AE+YF L + K++ TYG+LLN Y + M E
Sbjct: 137 ERRDRFSLSSSDMAIQLDLVAKVRGVPHAEEYFESLPDPLKDKRTYGSLLNVYAQARMKE 196
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+ FE+M + + +T+ FN L Y+ + +P+KV + ++MK+RN+S D TY +W+
Sbjct: 197 KTEDTFEQMRKKGYASDTLPFNVLMNFYVDVEEPQKVSAVTDEMKERNVSFDVCTYNIWI 256
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
+S++ + D DG++RVF +M + WTTY+ LAS+++K FEKAE+ LK+ E+
Sbjct: 257 KSFAAMKDADGMDRVFNQMIADESVVANWTTYTTLASMHIKLGNFEKAEVCLKEAEKRTT 316
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
RD+K +HFLI+LY + V R+W K+TF N Y +L AL +L I+ +
Sbjct: 317 GRDKKCFHFLITLYSYLQKKEEVYRIWNWYKATFSTIHNLGYQEVLSALVRLGDIEGAEL 376
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMI 398
+EEW S+ SS+D + ++++ Y ++ +A N +K N + E
Sbjct: 377 LYEEWASKSSSFDPKTMNILLAWYSREGFVVKAEQTLNRFVEKGGNPKPNTW---EILAS 433
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
YL+ QL AL+ ME A + WRP V++ +F+E D D A+ VL S
Sbjct: 434 AYLKDNQLSEALSCMEKAAAVKSASRWRPRPSNVESLLAYFKENNDTDSADRLMGVLTSR 493
Query: 459 NCLDFSAYSLLIKTYIAAG 477
C + Y LI TY AG
Sbjct: 494 GCAENEEYKSLINTYALAG 512
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 159/438 (36%), Positives = 236/438 (53%), Gaps = 13/438 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWME 103
LY+R++ GG G A EG+ R D E C R LRKF R+ ALEV +WM
Sbjct: 70 LYRRVAV--GHGGRPVGRTLADWDEGER-RLDKWELCRIARELRKFRRFNLALEVYDWMT 126
Query: 104 SRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R+ FS + D A+ LDL AK G+ AE+YF L + K++ TYG+LLN Y + M E
Sbjct: 127 DRRDRFSLSSSDMAIQLDLIAKVRGVPDAEEYFEKLPDPLKDKRTYGSLLNVYAQARMKE 186
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+ FE+M + F +T+ FN L Y+ + +PEKV + ++MKQRNIS D TY +W+
Sbjct: 187 KTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWI 246
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
+ + + D D +ERV +M + WTTY+ LAS+++K E FEKAE LK+ E+
Sbjct: 247 KCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKEAEKRAT 306
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
RD+K +HFLI+LY + + V R+W K+TF N Y +L AL +L I+ +
Sbjct: 307 GRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEGAEL 366
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMI 398
+EEW S+ SS+D + ++++ Y ++ +A N +K N + E
Sbjct: 367 LYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTW---EILAT 423
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
YL+ QL AL+ +E A + WRP V+T +F+E+ D + + VL+S
Sbjct: 424 AYLKDNQLSEALSCLEKATAVKSASKWRPRPTNVETLLAYFKEKNDTESVDRLMSVLRSR 483
Query: 459 NCLDFSAYSLLIKTYIAA 476
C + Y LI TY A
Sbjct: 484 GCAENEEYKSLIDTYALA 501
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/438 (36%), Positives = 235/438 (53%), Gaps = 13/438 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWME 103
LY+R++ GG G A EG+ R D E C R LRKF R+ ALEV +WM
Sbjct: 70 LYRRVAV--GHGGRPVGRTLADWDEGER-RLDKWELCRIARELRKFRRFNLALEVYDWMT 126
Query: 104 SRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R+ FS + D A+ LDL AK G+ E+YF L + K++ TYG+LLN Y + M E
Sbjct: 127 DRRDRFSLSSSDMAIQLDLIAKVRGVPDTEEYFEKLPDPLKDKRTYGSLLNVYAQARMKE 186
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+ FE+M + F +T+ FN L Y+ + +PEKV + ++MKQRNIS D TY +W+
Sbjct: 187 KTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWI 246
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
+ + + D D +ERV +M + WTTY+ LAS+++K E FEKAE LK+ E+
Sbjct: 247 KCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKEAEKRAT 306
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
RD+K +HFLI+LY + + V R+W K+TF N Y +L AL +L I+ +
Sbjct: 307 GRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEGAEL 366
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMI 398
+EEW S+ SS+D + ++++ Y ++ +A N +K N + E
Sbjct: 367 LYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTW---EILAT 423
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
YL+ QL AL+ +E A + WRP V+T +F+E+ D + + VL+S
Sbjct: 424 AYLKDNQLSEALSCLEKATAVKSASKWRPRPTNVETLLAYFKEKNDTESVDRLMSVLRSR 483
Query: 459 NCLDFSAYSLLIKTYIAA 476
C + Y LI TY A
Sbjct: 484 GCAENEEYKSLIDTYALA 501
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 153/439 (34%), Positives = 242/439 (55%), Gaps = 13/439 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWME 103
LY+R+ A+G G V L A+ EG+ R D E C + LRKF R+ AL+V +WM
Sbjct: 82 LYRRI-AVGHGGRPVGRTLGAWD-EGER-RLDKWELCRIAKELRKFRRFNLALQVYDWMT 138
Query: 104 SRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R+ FS + D A+ LDL AK G++ AEKYF+ L + K++ TYG+LLN Y + +M E
Sbjct: 139 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKE 198
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+ FE+M + F +T+ N L Y+ G+P +V ++++MK+RN+S D TY +W+
Sbjct: 199 KTEDTFEQMRKKGFASDTLPCNVLMNFYVDSGEPNEVLAIIDEMKERNVSFDVCTYNIWI 258
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
+S + D + +ERVF +M + WTTY+ LAS+Y+K EKAE LK E+
Sbjct: 259 KSCAAKQDAEEMERVFSQMIADESVVANWTTYTTLASMYIKLGNSEKAEECLKDAEKRTT 318
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
R++K +H+L++LY + + V R+W K+TFP N Y LL AL ++ I+ +
Sbjct: 319 GREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALVRIGDIEGAEL 378
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMI 398
+EEW S+ SS+D + ++++ Y ++ + +A N +K N + E
Sbjct: 379 LYEEWASKSSSFDPKTMNILLAWYAKEGLITKAEQTLNRFVEKGGNPKPNTW---EILAT 435
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
Y++ ++ AL+ ME A + W+P V++ F+E+ D +GA+ VL S
Sbjct: 436 AYMKDDKISEALSCMEKATAIKSANKWKPRPTNVESLLASFKEKNDAEGADRLVSVLTSR 495
Query: 459 NCLDFSAYSLLIKTYIAAG 477
C + Y LI TY AG
Sbjct: 496 GCAEDEEYKSLINTYAFAG 514
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 163/434 (37%), Positives = 245/434 (56%), Gaps = 21/434 (4%)
Query: 41 GNEDK--LYKRLSALG--ATGGSVTGALNAYIMEGK--TVRKDMLEYCVRSLRKFGRYRH 94
G +DK L +RL LG A GSV+ L+ ++ EG+ + L C R L K R H
Sbjct: 39 GKKDKRPLGRRLLELGDAAGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRDAH 98
Query: 95 ALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALL 151
ALE+++WM ++ M +Y +A++L+L GI AAE+YF+G+ + + N TYGALL
Sbjct: 99 ALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALL 158
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
NCYC M E+A ++ +MDEL +T NNL +YL LGQ KV L ++MK+RN+
Sbjct: 159 NCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKERNVQ 218
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
D LT + M+S++ N ID V+ FY M + + +W+ + L SIY+ A + E+AEL
Sbjct: 219 PDELTCCILMRSHAAHNKIDTVKETFYNM-SLLDVPKQWSIFRTLGSIYMNAGMVEEAEL 277
Query: 272 ALKKLEEMKPRD--RKAYHFLISLYCNTSNLDAVNRVWGILKSTFP--PTNTSYLVLLQA 327
A + +E D R ++FL+ + + NL VNRVW +K TF TN SYL++LQ
Sbjct: 278 AFMRAQEFLGFDHGRHPFYFLMRQFASIGNLRGVNRVWKDIKMTFSYNRTNFSYLLMLQC 337
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASA 387
L KL D +K+ ++EWE R +YD RL +++ RA+L+ M EA L++ K+R
Sbjct: 338 LYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDFD 397
Query: 388 RFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDG 447
F++ E F +YL AL E +++ + + Q T F ++FEE+K V+G
Sbjct: 398 --FETCELFREHYLGKGDTTSALKWAE-KMTKLPKKQGKQDQETC-KFLKWFEEDKVVEG 453
Query: 448 AEEFCKVLKSLNCL 461
A+ C NCL
Sbjct: 454 AKSTCNC---SNCL 464
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 242/436 (55%), Gaps = 13/436 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWME 103
LY+R+ A+G G V L A+ EG+ R D E C R LRKF R+ AL+V +WM
Sbjct: 78 LYRRI-AVGHGGRPVGRTLGAWD-EGER-RLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 104 SRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R+ FS + D A+ LDL AK G++ AE+YF L + K++ TYG+LLN Y + +M E
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+ + FE+M + F +T+ FN L Y+ + EKV L+++M +RN++ D TY +W+
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
+S + + D D +E+VF +M + WTTY+ LAS+++K EKAE +LK+ E+
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
R++K +H+L++LY + + V RVW K+TFP N Y +L AL +L I+ +
Sbjct: 315 GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAEL 374
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMI 398
+EEW S+ SS+D + ++++ Y ++ +A N +K N + E
Sbjct: 375 LYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTW---EILGT 431
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
YL+ Q AL+ +E A + A WRP V++ F+E+ D + A+ VL+S
Sbjct: 432 AYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSR 491
Query: 459 NCLDFSAYSLLIKTYI 474
C + Y LI TY+
Sbjct: 492 RCEENEEYKSLINTYV 507
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 248/443 (55%), Gaps = 11/443 (2%)
Query: 42 NEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW 101
N+ LY +LS LG+T S+ L+++I GK V+ L+ + R R+ HAL+V EW
Sbjct: 28 NKATLYSKLSPLGSTP-SLEPELDSWIQNGKKVKVAELQRIIHDFRMRKRFTHALQVSEW 86
Query: 102 MESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMT 160
M + + FS + AV LDL + +G +AE YFN L + KN TYGALLNCY ++ T
Sbjct: 87 MNKKGICIFSPSQHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVQKRET 146
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
+++++ +KM E+ F +++++N++ +Y +GQ EKV ++N+MK+ N+S DN +Y +
Sbjct: 147 DKSISHLQKMKEMGFAKSSLSYNDIMCLYTNVGQHEKVPQVLNEMKENNVSPDNFSYRLC 206
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EM 279
M SY D++G+E++ EM ++ + W +Y+ AS Y+K L +KA +LKK E +
Sbjct: 207 MNSYGARGDLEGMEKMLNEMEHQPDIVVDWNSYAVAASSYIKGGLTDKAIDSLKKSETRL 266
Query: 280 KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDILK 338
+D Y+ LISLY V R+W + KST P N Y+ ++ +L KL+ + ++
Sbjct: 267 DKKDGTGYNHLISLYATLGEKTEVLRLWDLEKSTCERPINKDYINIMASLVKLDEFEEVE 326
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMI 398
+ +EWE+ + YD+R+ + +I Y K +YE+A + N ++ A+ +
Sbjct: 327 KVLKEWEASGNFYDVRVPNTLIIGYSGKGLYEKAKALLENLTEKGKATLPNIWGK--VAA 384
Query: 399 YYLRSRQLDLALNEMEAAL---SEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL 455
+ ++ A + M+AAL E K+ W+P Q + + +E + AE F L
Sbjct: 385 GFFDKNEVAKAFSCMKAALCLYEENKE--WKPNQKVITGILSWLGDEGSAEDAEAFVSSL 442
Query: 456 KSLNCLDFSAYSLLIKTYIAAGK 478
K++ ++ Y ++K +I AGK
Sbjct: 443 KNVIPMNREMYHAVLKAHIRAGK 465
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 241/435 (55%), Gaps = 13/435 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWME 103
LY+R+ A+G G V L A+ EG+ R D E C R LRKF R+ AL+V +WM
Sbjct: 78 LYRRI-AVGHGGRPVGRTLGAWD-EGER-RLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 104 SRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R+ FS + D A+ LDL AK G++ AE+YF L + K++ TYG+LLN Y + +M E
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+ + FE+M + F +T+ FN L Y+ + EKV L+++M +RN++ D TY +W+
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
+S + + D D +E+VF +M + WTTY+ LAS+++K EKAE +LK+ E+
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
R++K +H+L++LY + + V RVW K+TFP N Y +L AL +L I+ +
Sbjct: 315 GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAEL 374
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMI 398
+EEW S+ SS+D + ++++ Y ++ +A N +K N + E
Sbjct: 375 LYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTW---EILGT 431
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
YL+ Q AL+ +E A + A WRP V++ F+E+ D + A+ VL+S
Sbjct: 432 AYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSR 491
Query: 459 NCLDFSAYSLLIKTY 473
C + Y LI TY
Sbjct: 492 RCEENEEYKSLINTY 506
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/434 (37%), Positives = 244/434 (56%), Gaps = 21/434 (4%)
Query: 41 GNEDK--LYKRLSALG--ATGGSVTGALNAYIMEGK--TVRKDMLEYCVRSLRKFGRYRH 94
G +DK L +RL LG A GSV+ L+ ++ EG+ + L C R L K R H
Sbjct: 39 GKKDKRPLGRRLLELGDAAGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRDAH 98
Query: 95 ALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALL 151
ALE+++WM ++ M +Y +A++L+L GI AAE+YF+G+ + + N TYGALL
Sbjct: 99 ALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALL 158
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
NCYC M E+A ++ +MDEL +T NNL +YL LGQ K L ++MK+RN+
Sbjct: 159 NCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKAANLFDEMKERNVQ 218
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
D LT + M+S++ N ID V+ FY M + + +W+ + L SIY+ A + E+AEL
Sbjct: 219 PDELTCCILMRSHAAHNKIDTVKETFYNM-SLLDVPKQWSIFRTLGSIYMNAGMVEEAEL 277
Query: 272 ALKKLEEMKPRD--RKAYHFLISLYCNTSNLDAVNRVWGILKSTFP--PTNTSYLVLLQA 327
A + +E D R ++FL+ + + +L VNRVW +K TF TN SYL++LQ
Sbjct: 278 AFMRAQEFLGFDHGRHPFYFLMRQFASIGSLRGVNRVWKDIKMTFSYNRTNFSYLLMLQC 337
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASA 387
L KL D +K+ ++EWE R +YD RL +++ RA+L+ M EA L++ K+R
Sbjct: 338 LYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDFD 397
Query: 388 RFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDG 447
F++ E F +YL AL E +++ + + Q T F ++FEE+K V+G
Sbjct: 398 --FETCELFREHYLGKGDTTSALKWAE-KMTKLPKKQGKQDQETC-KFLKWFEEDKVVEG 453
Query: 448 AEEFCKVLKSLNCL 461
A+ C NCL
Sbjct: 454 AKSTCNC---SNCL 464
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 240/439 (54%), Gaps = 13/439 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWME 103
LY+R+ A+G G V L A+ EG+ R D E C + LRKF R+ AL+V +WM
Sbjct: 80 LYRRI-AVGHGGRPVGRTLGAWD-EGER-RLDKWELCRIAKELRKFRRFNLALQVYDWMT 136
Query: 104 SRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R+ F S +D A+ LDL AK G+ AEKYF+ L + K++ TYG+LLN Y + +M E
Sbjct: 137 ERRDRFPLSSSDMAIQLDLIAKVRGVPHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKE 196
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+ FE+M + F +T+ N L Y+ G+P++V ++++MK+RN+S D TY +W+
Sbjct: 197 KTEETFEQMRKKGFASDTLPCNVLMNFYVDSGEPDEVLAIIDEMKERNVSFDVCTYNIWI 256
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
+S + D + +E+VF +M + WTTY+ LAS+Y+K EKAE LK E+
Sbjct: 257 KSCAAKQDAEEMEQVFSQMIADESVVANWTTYTTLASMYLKLGNSEKAEECLKDAEKRTT 316
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
R++K +H+L++LY + + V R+W K+TFP N Y LL AL ++ I+ +
Sbjct: 317 GREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALIRIGDIEGAEL 376
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMI 398
+EEW S+ S+D + ++++ Y ++ + +A N +K N + E
Sbjct: 377 LYEEWASKSYSFDPKTMNILLAWYAKEGLITKAEQTVNRFVEKGGNPKPNTW---EILAT 433
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
Y+ ++ AL+ ME A + W+P V+T F+E+ D +GA+ VL S
Sbjct: 434 AYMNDDKISEALSCMEKATAVKSASKWKPRPTNVETLLASFKEKNDAEGADRLVSVLTSR 493
Query: 459 NCLDFSAYSLLIKTYIAAG 477
C + Y LI TY AG
Sbjct: 494 GCAEDEEYKSLIDTYAFAG 512
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/442 (32%), Positives = 243/442 (54%), Gaps = 6/442 (1%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
+ +Y+R+S + LN + EGK + K L V+ LRK+ RY+ ALEV +WM+
Sbjct: 69 NGIYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQALEVYDWMK 128
Query: 104 SRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
+R+ F S +D A+ LDL AK G++ AE +F L K+R YGALLN Y + M E
Sbjct: 129 NRQERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLNAYVQNRMRE 188
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+A LF++M + ++ + + FN T+Y+ + + +KV ++++M ++NI LD +Y +W+
Sbjct: 189 KAETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWL 248
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
S D +E+V+ +M ++ WTT+S +A++Y+K FEKAE L+++E +
Sbjct: 249 SSCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDCLRRVESRIT 308
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQ 339
RDR YH+L+SLY N N + V RVW I KS FP N Y ++ +L +L+ I+ ++
Sbjct: 309 GRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEGAEK 368
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY 399
+EEW S +SYD R+A++ I AY+ + +EA F++ + + E
Sbjct: 369 IYEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNS--NTWEILAQG 426
Query: 400 YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
++ R+ AL+ ++ A W+P V +FF+ EEE D+ E L+
Sbjct: 427 HISERRTSEALSCLKEAFVTPGSKSWKPNPANVTSFFKLCEEEADMANKEALEGFLRQSG 486
Query: 460 CLDFSAYSLLIKTYIAAGKLAS 481
L AY+ L+ + +L++
Sbjct: 487 HLKDKAYASLLGMPVTGDELST 508
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 222/397 (55%), Gaps = 37/397 (9%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL 151
Y+ AL++ E M R M + D A++LDL AK GI AA+ YF L E AKN +GA+L
Sbjct: 80 YQLALKLSETMAKRNMIKTVRDHAIHLDLLAKARGITAAKNYFVNLPESAKNHLCHGAIL 139
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
NCYCKE M E+A EKM EL +++ +N+L +Y ++GQPEKV L+ +MK NI
Sbjct: 140 NCYCKEPMIEKAEGFMEKMKELSLPLSSMPYNSLIMLYTKVGQPEKVSSLIQEMKTSNIM 199
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
LD+ TY VWM++ + +NDI VERV EM +
Sbjct: 200 LDSYTYNVWMRALAAVNDISSVERVHDEM------------------------------M 229
Query: 272 ALKKLEEMKP-RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALA 329
AL +LE+ +D AY FLI+ Y TSNL V RVW L+ FP T N SYL +++ L
Sbjct: 230 ALTELEKRNAFKDLTAYQFLITFYGXTSNLYEVFRVWRSLRLAFPKTANISYLNMIRVLV 289
Query: 330 KLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF 389
K + ++CF E E C +YD+R+ +V+IRAY + DM E+A + +A++R +
Sbjct: 290 KSKDLLGEEKCFXEXECGCPTYDIRVVNVLIRAYAKLDMLEKAEELKEHARRR--GAKPN 347
Query: 390 FKSRESFMIYYLRSRQLDLALNEMEAALSEAK--QFHWRPMQVTVDTFFRFFEEEKDVDG 447
K+ E FM YYL+ ++ ++ A+S + W P +D R FE+EKDVDG
Sbjct: 348 GKTLEIFMDYYLQKGNFKSTVDCLDEAISMGRWNGEKWVPXSKIIDIMMRNFEQEKDVDG 407
Query: 448 AEEFCKVL-KSLNCLDFSAYSLLIKTYIAAGKLASDM 483
AEEF ++L KS+ + L +TY A G+++S M
Sbjct: 408 AEEFLEILKKSMESPGVEVFESLTRTYAATGRISSAM 444
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 244/443 (55%), Gaps = 9/443 (2%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
+ D L +RL +L S A+ + EG TVRK L VR LRK RY+HALE+
Sbjct: 52 SSGRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEIC 111
Query: 100 EWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL 158
EWM + + D+AV+LDL AK G+A+AEK+F LS+ K + T ALL+ Y +
Sbjct: 112 EWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNK 171
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
++E+A AL EKM E FL + +N++ ++Y+ GQ EKV ++ ++K +N S D +TY
Sbjct: 172 VSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYN 230
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
+W+ + ND++ E+V E+ D W TYS+L ++Y+K L +KA L ++E+
Sbjct: 231 LWLTVCASQNDVETAEKVLLEIKKAKIDP-DWVTYSSLTNLYIKKGLLDKAATTLNEMEK 289
Query: 279 MKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDI 336
R R AY LISL+ N + D V+R+W LKS F N + Y ++ +L KL +
Sbjct: 290 RTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEE 349
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESF 396
+ + EW S + D R+ ++++ AY+ K+ E A +N +R + + + E
Sbjct: 350 AENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPS--YTTWELL 407
Query: 397 MIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
YL+ +Q++ L+ E A+ K+ W P + V ++ EE+ +++GAE+ +L+
Sbjct: 408 TWGYLKKKQMEKVLDYFEKAVGSVKK--WNPDEKLVREVYKNLEEQGNIEGAEKVLVILR 465
Query: 457 SLNCLDFSAYSLLIKTYIAAGKL 479
+ Y+ L++ Y AGK+
Sbjct: 466 KAGHVSTEIYNWLLRAYAKAGKM 488
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 244/443 (55%), Gaps = 9/443 (2%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
+ D L +RL +L S A+ + EG TVRK L VR LRK RY+HALE+
Sbjct: 165 SSGRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEIC 224
Query: 100 EWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL 158
EWM + + D+AV+LDL AK G+A+AEK+F LS+ K + T ALL+ Y +
Sbjct: 225 EWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNK 284
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
++E+A AL EKM E FL + +N++ ++Y+ GQ EKV ++ ++K +N S D +TY
Sbjct: 285 VSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYN 343
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
+W+ + ND++ E+V E+ D W TYS+L ++Y+K L +KA L ++E+
Sbjct: 344 LWLTVCASQNDVETAEKVLLEIKKAKIDP-DWVTYSSLTNLYIKKGLLDKAATTLNEMEK 402
Query: 279 MKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDI 336
R R AY LISL+ N + D V+R+W LKS F N + Y ++ +L KL +
Sbjct: 403 RTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEE 462
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESF 396
+ + EW S + D R+ ++++ AY+ K+ E A +N +R + + + E
Sbjct: 463 AENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPS--YTTWELL 520
Query: 397 MIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
YL+ +Q++ L+ E A+ K+ W P + V ++ EE+ +++GAE+ +L+
Sbjct: 521 TWGYLKKKQMEKVLDYFEKAVGSVKK--WNPDEKLVREVYKNLEEQGNIEGAEKVLVILR 578
Query: 457 SLNCLDFSAYSLLIKTYIAAGKL 479
+ Y+ L++ Y AGK+
Sbjct: 579 KAGHVSTEIYNWLLRAYAKAGKM 601
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 240/439 (54%), Gaps = 11/439 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY R+S LG S+ L+ ++ EGK V+ L V+ LR+ R++ ALEV +WM S
Sbjct: 2 LYSRISPLGDPRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSSN 61
Query: 106 KM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
++ +FS +D AV LDL K +G+ +AE YF L E K TYGALLNCY + + E++L
Sbjct: 62 RLCNFSPSDDAVRLDLIGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLVEKSL 121
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ +KM EL F + +N+L +Y+ G EKV +++ MK+ IS D +Y + ++SY
Sbjct: 122 SHVQKMKELGFFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLKSY 181
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR 284
+D D VE++ EM ++ W T++ +A+IY++A L EKA + LKK EE ++
Sbjct: 182 GERSDFDNVEKILREMESQSHISMDWRTFATVANIYLEAGLKEKALVYLKKCEEKVNKNA 241
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQCFEE 343
Y+ LISLY + N D + R+W + K+ N Y+ +L +L KL ++ ++ ++
Sbjct: 242 LGYNHLISLYASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKLLQD 301
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY---Y 400
WES C YD R+ +V++ Y +K + E+A + + ++ K+ S+ I Y
Sbjct: 302 WESSCQYYDFRVPNVVLIGYSRKGLPEKAEAMLQDIIEKQK-----MKNPSSWSIISAGY 356
Query: 401 LRSRQLDLALNEMEAAL-SEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
+ + ++ A M+ AL +E + WRP + + + +D E F +L++
Sbjct: 357 MDKQNMEKAFECMKEALAAETENNGWRPKPAMISNILNWLGDNRDAQEVEAFVGLLETKV 416
Query: 460 CLDFSAYSLLIKTYIAAGK 478
Y LIK+YI GK
Sbjct: 417 PKSREMYHALIKSYIRCGK 435
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 237/442 (53%), Gaps = 6/442 (1%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY ++S LG SV L+ ++ +G +R L+ +R LRK R+ AL++ EWM ++
Sbjct: 23 LYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKRSRFSQALQISEWMHNK 82
Query: 106 KM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
+ FS T++AV+LDL K +G ++AE YF+ L + K TYGALLNCY ++ T++AL
Sbjct: 83 GVCIFSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHKTNKTYGALLNCYVRQRQTDKAL 142
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ +KM +L F + + +N++ +Y +GQ EKV ++ +MKQ + DN +Y + + SY
Sbjct: 143 SHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQNQVLPDNFSYRICINSY 202
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRD 283
+D GVERV EM + W TYS A+ Y+KA L A AL+K EE + +D
Sbjct: 203 GVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKAGLTRDAVCALRKSEERLDNKD 262
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFE 342
+ Y+ LISLY + V R+W + K+ N + LL++L KL +D ++ +
Sbjct: 263 GQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLESLVKLGELDEAEKILK 322
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLR 402
EWES + YD + ++I Y QK ++E+A + + + + S + Y+
Sbjct: 323 EWESSDNCYDFGIPSIVIIGYSQKGLHEKALAMLEELQNKEKVTTPNCWSIVAGG--YIH 380
Query: 403 SRQLDLALNEMEAALS-EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+++ A + ALS + W+P + R+ + V+ AE +L++ +
Sbjct: 381 KGEMEKAFKCFKTALSLYVENKGWKPNAKVIAELLRWIGDNGSVEDAEVLVSLLRNAVPV 440
Query: 462 DFSAYSLLIKTYIAAGKLASDM 483
+ Y LIKTYI GK D+
Sbjct: 441 NRQMYHTLIKTYIRGGKEVDDL 462
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 249/459 (54%), Gaps = 10/459 (2%)
Query: 24 PTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCV 83
P V + + +G D L +RL +L S A+ + EG TVRK L V
Sbjct: 37 PKAVVKPKTSDGNSTSSG-RDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIV 95
Query: 84 RSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
R LRK RY+HALE+ EWM + + D+AV+LDL AK G+A+AEK+F LS+ K
Sbjct: 96 RELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMK 155
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ T ALL+ Y + ++E+A AL EKM E FL + +N++ ++Y+ GQ EKV ++
Sbjct: 156 GQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMI 215
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++K +N S D +TY +W+ + ND++ E+V E+ D W TYS+L ++Y+K
Sbjct: 216 QELK-KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDP-DWVTYSSLTNLYIK 273
Query: 263 AELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS- 320
L +KA L ++E+ R R AY LISL+ N + D V+R+W LKS F N +
Sbjct: 274 KGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAE 333
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y ++ +L KL + + + EW S + D R+ ++++ AY+ K+ E A +N
Sbjct: 334 YTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMV 393
Query: 381 KRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFE 440
+R + + + E YL+ +Q++ L+ E A+ K+ W P + V ++ E
Sbjct: 394 ERGITPS--YTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKK--WNPDEKLVREVYKNLE 449
Query: 441 EEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
E+ +++GAE+ +L+ + Y+ L++ Y AGK+
Sbjct: 450 EQGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKM 488
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 235/422 (55%), Gaps = 13/422 (3%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWME 103
LY+R+ A+G G V L A+ EG+ R D E C R LRKF R+ AL+V +WM
Sbjct: 78 LYRRI-AVGHGGRPVGRTLGAWD-EGER-RLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 104 SRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R+ FS + D A+ LDL AK G++ AE+YF L + K++ TYG+LLN Y + +M E
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+ + FE+M + F +T+ FN L Y+ + EKV L+++M +RN++ D TY +W+
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
+S + + D D +E+VF +M + WTTY+ LAS+++K EKAE +LK+ E+
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
R++K +H+L++LY + + V RVW K+TFP N Y +L AL +L I+ +
Sbjct: 315 GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAEL 374
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMI 398
+EEW S+ SS+D + ++++ Y ++ +A N +K N + E
Sbjct: 375 LYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTW---EILGT 431
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
YL+ Q AL+ +E A + A WRP V++ F+E+ D + A+ VL+S
Sbjct: 432 AYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSR 491
Query: 459 NC 460
C
Sbjct: 492 RC 493
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 241/436 (55%), Gaps = 6/436 (1%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
P + +Y+R+S + LN + +GK + K L V+ LRK+ RY+ ALEV
Sbjct: 64 PMMKWNAIYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKRYQQALEV 123
Query: 99 IEWMESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
+WM +R+ F S +D A+ LDL AK G+++AE +F L K+R YGALLN Y +
Sbjct: 124 YDWMNNRQERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYVR 183
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
M E+A +L ++M ++ + + +N + T+Y+ + + +KV ++++M ++NI LD +
Sbjct: 184 NRMREKAESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYS 243
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y +W+ S D +E+VF +M ++ WTT+S +A++Y+K FEKAE L+++
Sbjct: 244 YNIWLSSCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAEDCLRRV 303
Query: 277 EE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAI 334
E + RDR YH+L+SLY N N + V RVW I KS FP N Y ++ +L +++ I
Sbjct: 304 ESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMDDI 363
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRE 394
+ ++ +EEW S +SYD R+A++ + A++ + ++A F++ + S E
Sbjct: 364 EGAEKIYEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPNS--HSWE 421
Query: 395 SFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
++ R+ AL+ ++ A + W+P V +FF+ EEE D+ E
Sbjct: 422 ILAQGHISERRTSEALSCLKEAFATPGSKSWKPNPANVSSFFKLCEEEVDMASKEALASF 481
Query: 455 LKSLNCLDFSAYSLLI 470
L+ L AY+LL+
Sbjct: 482 LRQSGHLKDKAYALLL 497
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 234/436 (53%), Gaps = 6/436 (1%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
P + +YK++S + LN + G+ + K L V+ LRK+ R ALEV
Sbjct: 61 PIVQWNAIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEV 120
Query: 99 IEWMESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
+WM +R F S +D A+ LDL K GI+ AE++F L E K+R YG+LLN Y +
Sbjct: 121 YDWMNNRGERFRLSASDAAIQLDLIGKVRGISDAEQFFLTLPENFKDRRVYGSLLNAYVR 180
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E+A AL M + + + + FN + T+Y+ L + +KV +V +MKQ++I LD +
Sbjct: 181 AKSREKAEALLHTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYS 240
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y +W+ S L ++ +E V+ +M ++ WTT+S +A++Y+K EKAE AL+K+
Sbjct: 241 YNIWLSSCGSLGSVEKMELVYQQMKSDVSINPNWTTFSTMATMYIKMGETEKAEDALRKV 300
Query: 277 E-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAI 334
E + R+R YH+L+SLY + N + RVW + KS P N Y L+ +LA++ I
Sbjct: 301 EARITGRNRIPYHYLLSLYGSVGNKKELYRVWNVYKSVVPSIPNLGYHALVSSLARMGDI 360
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRE 394
+ ++ +EEW SSYD R+ ++++ Y++ D E+A +F++ + + + E
Sbjct: 361 EGAEKVYEEWLPVKSSYDPRIPNLLMNVYVKNDQLEKAEGLFDHMVEMGGKPSS--STWE 418
Query: 395 SFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
+ R R + AL + A S +WRP + + FF+ EEE DV E ++
Sbjct: 419 ILADGHTRKRCIPEALTCLRKAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLEL 478
Query: 455 LKSLNCLDFSAYSLLI 470
L+ L+ AY LI
Sbjct: 479 LRQSGHLEDKAYQALI 494
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 245/451 (54%), Gaps = 12/451 (2%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
P + +Y+R+S + LN +GK + K L V+ LRK+ R++ ALEV
Sbjct: 64 PMIKWNSVYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALEV 123
Query: 99 IEWMESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
+WM +R+ F S +D A+ LDL AK G+++AE YF LS+ K+R YGALLN Y K
Sbjct: 124 YDWMNNREERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVK 183
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
M E+A +L EKM + + + + FN + T+Y+ L + +KV ++++M +NI LD +
Sbjct: 184 ARMREKAESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYS 243
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y +W+ S I+ +E V+ +M + WTT+S +A++Y+K EKAE L+++
Sbjct: 244 YNIWLSSRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRRV 303
Query: 277 EE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAI 334
E + RDR YH+L+SLY N N + + RVW I KS F N Y ++ +L +++ I
Sbjct: 304 ESRITGRDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDI 363
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN---AKKRANASARFFK 391
+ ++ +EEW SSYD R+ ++++ Y++ ++A F++ + N+S
Sbjct: 364 EGAEKIYEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSS----- 418
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
+ E + R +++ AL+ + A W+P V + +FF+ EEE D+
Sbjct: 419 TWEILADGHTREKRISEALSCFKEAFLAQGSKSWKPKPVIISSFFKLCEEEADMASTGVL 478
Query: 452 CKVLKSLNCLDFSAYSLLIKTYIAAGKLASD 482
+L L+ Y+ LI + + + +L+++
Sbjct: 479 EDLLAQSGYLEDKTYASLIGSSVPSNELSTE 509
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 244/442 (55%), Gaps = 7/442 (1%)
Query: 41 GNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIE 100
N+ LY ++S LG+T S+ L++++ G VR L+ + LRK R+ HAL+V E
Sbjct: 27 ANKATLYSKISPLGSTP-SLEPELDSWVRSGNKVRVAELQRIIHDLRKRKRFSHALQVSE 85
Query: 101 WMESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
WM + + FS ++ AV LDL + +G +AE YFN L + KN TYGALLNCY ++
Sbjct: 86 WMHKKDICIFSPSEHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVRQRE 145
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
T++++ +KM E+ F +++ +N++ +Y +GQ EKV ++N+MK+ N+ DN +Y +
Sbjct: 146 TDKSILHLQKMKEMGFAKSSLTYNDIMCLYTNVGQHEKVPQVLNEMKENNVLPDNFSYRL 205
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-E 278
+ S+ +D++G+E++ EM ++ + W TY+ A+ Y+ +L +KA LKK E
Sbjct: 206 CINSFGARDDLEGMEKILNEMEHQPDIVMDWNTYAVAANFYIIGDLTDKAIDTLKKSEAR 265
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDIL 337
+ +D Y+ LISLY N V R+W + KS N Y++++++L KL+ +
Sbjct: 266 LDKKDGTGYNHLISLYAKLGNKTEVLRLWDLEKSACERHINKDYIIMMESLLKLSEFEEA 325
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFM 397
++ +EWES + YD+R+ + +I Y +K + E+A + N ++ + S
Sbjct: 326 EKMLKEWESSGNFYDVRVPNTLIIGYSRKGLCEKAKALLENLTEKGKMT--LPNSWGIVA 383
Query: 398 IYYLRSRQLDLALNEMEAALS-EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
+ ++ A + M+AAL + W+P Q ++ + +E + AE F LK
Sbjct: 384 AGFFDKSEVAKAFSCMKAALCLYVENKGWKPNQRVINGILSWLGDEGSAEDAEAFVSSLK 443
Query: 457 SLNCLDFSAYSLLIKTYIAAGK 478
++ ++ Y ++K I AGK
Sbjct: 444 TVIPVNREMYHAVLKANIRAGK 465
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/423 (33%), Positives = 224/423 (52%), Gaps = 12/423 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY R+S LG +V LN +I EG+ ++ L VR LR RYR ALEV EWM S+
Sbjct: 48 LYARISPLGDPECTVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSK 107
Query: 106 KMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
+ FS T DFA+ LDL + G+ +AEKYF +S + YGALLNCY +E + +++
Sbjct: 108 GL-FSLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKS 166
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
LA +KM E+ + + +N++ +YL GQ +KV ++++MK+ + DN +Y + + S
Sbjct: 167 LAHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISS 226
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD 283
Y +D+ +E V EM + WTTYS +A ++KA + +KA L+K E+ D
Sbjct: 227 YGARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKVDED 286
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
++ LIS Y N + + V R+W +LK N Y+ +L +L KL ++ + E
Sbjct: 287 ALGFNHLISHYTNLGHKNEVMRLWALLKKGKKQLNRDYITMLGSLVKLELLEEAENLVME 346
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY---Y 400
WES C YD R+ +V++ Y QK + E+A + N S S+ I Y
Sbjct: 347 WESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNG-----MIPSPNSWGIIASGY 401
Query: 401 LRSRQLDLALNEMEAALSEAKQFH-WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
L + L+ A M+ AL+ Q WRP + + R+ E + + +EF LK++
Sbjct: 402 LEKQNLEKAFECMKEALAVKGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVP 461
Query: 460 CLD 462
+D
Sbjct: 462 SMD 464
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 254/480 (52%), Gaps = 14/480 (2%)
Query: 8 RLISTGSYLVRQLCSTPTETVSQRIAAPT---PFPTGNEDKLYKRLSALGATGGSVTGAL 64
RL S + V +T S A T G D L RL +L T S +
Sbjct: 15 RLFSAAAGTVDTTAEAAVKTRSGGGGAATNRKETVVGGRDTLGGRLLSLVYTKRSAVVTI 74
Query: 65 NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME-SRKMHFSYTDFAVYLDLTAK 123
+ EG +VRK L VR LRK RY+HALE+ EWM + D+AV+LDL +K
Sbjct: 75 RKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVLQEDIKLQAGDYAVHLDLISK 134
Query: 124 TNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
G+ +AEK+F L + + +LL+ Y + ++++A ALFEKM E FL + + +N
Sbjct: 135 IRGLNSAEKFFEDLPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYN 194
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
++ +M++ GQ EKV L+ ++K + S D +TY +W+ +++ ND++G E+V+ + E
Sbjct: 195 HMLSMFISKGQFEKVSVLIKELKMKT-SPDIVTYNLWLTAFASGNDVEGAEKVYLK-AKE 252
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM-KPRDRKAYHFLISLYCNTSNLDA 302
+ W TYS L ++Y K + EKA+LALK++E++ ++R AY LISL+ N + D
Sbjct: 253 SKLNPDWVTYSVLTNLYAKTDNLEKAKLALKEMEKLVSKKNRVAYASLISLHANLGDKDG 312
Query: 303 VNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
VN W ++S+F N + YL ++ A+ KL + K ++EWES + D R+ ++I+
Sbjct: 313 VNLTWKKVRSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILA 372
Query: 362 AYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEA 420
Y+ +D + +K N S + + E YL+ + L+ L+ E A+
Sbjct: 373 EYMNRDEILLGEKFYERIVEKGINPS---YSTWEILTWAYLKRKDLEKVLDCFEKAIDSV 429
Query: 421 KQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLA 480
K+ W V + EE+ +V GAE+ +L+ ++ Y+ L++TY AG++A
Sbjct: 430 KK--WTVNVRLVKAVCKELEEQGNVKGAEKLMTLLQKAGHVNTQLYNSLLRTYAKAGEMA 487
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 230/437 (52%), Gaps = 6/437 (1%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY ++S LG SV L+ ++ G V L+ + LRK R+ ALE+ EWM +
Sbjct: 41 LYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKK 100
Query: 106 KM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
+ FS T+ AV LDL + G +AE YFN L + K TYGALLNCY ++ T+++L
Sbjct: 101 GICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSL 160
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ +KM E+ F + + +N++ +Y +GQ EKV ++ +MKQ N+ DN +Y + + SY
Sbjct: 161 SHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSY 220
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRD 283
+DI G+E V EM + W TY+ A+ Y+KA L +KA ALKK EE + RD
Sbjct: 221 GAQSDIQGMENVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRD 280
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQCFE 342
Y+ LISLY + N V R+W + KS N Y+ +L++L +L ++ ++
Sbjct: 281 GLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLR 340
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLR 402
EWES + YD R+ +++I Y +K ++E+A + ++ + S + Y+
Sbjct: 341 EWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTP--NSWGTVASGYMD 398
Query: 403 SRQLDLALNEMEAALS-EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+++ A+ M+AA+S +P + + ++ V+ E F L+ + +
Sbjct: 399 EGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPM 458
Query: 462 DFSAYSLLIKTYIAAGK 478
+ Y LI I AGK
Sbjct: 459 NRRMYHTLIMANIRAGK 475
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 230/411 (55%), Gaps = 13/411 (3%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWME 103
LY+R+ A+G G V L A+ EG+ R D E C R LRKF R+ AL+V +WM
Sbjct: 78 LYRRI-AVGHGGRPVGRTLGAWD-EGER-RLDKWELCRIARELRKFRRFNLALQVYDWMT 134
Query: 104 SRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R+ FS + D A+ LDL AK G++ AE+YF L + K++ TYG+LLN Y + +M E
Sbjct: 135 ERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKE 194
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+ + FE+M + F +T+ FN L Y+ + EKV L+++M +RN++ D TY +W+
Sbjct: 195 KTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWI 254
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
+S + + D D +E+VF +M + WTTY+ LAS+++K EKAE +LK+ E+
Sbjct: 255 KSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTT 314
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
R++K +H+L++LY + + V RVW K+TFP N Y +L AL +L I+ +
Sbjct: 315 GREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAEL 374
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMI 398
+EEW S+ SS+D + ++++ Y ++ +A N +K N + E
Sbjct: 375 LYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTW---EILGT 431
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAE 449
YL+ Q AL+ +E A + A WRP V++ F+E+ D + A+
Sbjct: 432 AYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESAD 482
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 229/436 (52%), Gaps = 5/436 (1%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY R+S LG S+ L+ ++ EGK VR L +R LR RY ALEV EWM S+
Sbjct: 39 LYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK 98
Query: 106 KM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
++ FS + AV LDL + G+ +AE YFN +S K YGALLNCY +E + +++L
Sbjct: 99 ELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSL 158
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ +KM EL F + +N L +Y+ Q EK+ ++++M++ IS DN +Y + + SY
Sbjct: 159 SHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSY 218
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR 284
+D++ +E++ EM ++ W TYS +A+ Y+KA L EKA LKK E +D
Sbjct: 219 GARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHKDP 278
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEE 343
Y+ LISLY + + + R+W K+ N Y+ +L +L KL ++ + +E
Sbjct: 279 LGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKE 338
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRS 403
WES + YD R+ + ++ + QK + E+A + + + S Y+
Sbjct: 339 WESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTP--NSWSIVAAGYIEK 396
Query: 404 RQLDLALNEMEAALSE-AKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD 462
+ ++ A M+ A++ A+ WRP + + + + +DV+ E F LK++ +D
Sbjct: 397 QNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMD 456
Query: 463 FSAYSLLIKTYIAAGK 478
Y I+ I AGK
Sbjct: 457 REMYHAQIRASIRAGK 472
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 232/437 (53%), Gaps = 6/437 (1%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY ++S LG SV L+ ++ G V L+ + LRK R+ ALE+ EWM +
Sbjct: 41 LYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKK 100
Query: 106 KM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
+ FS T+ AV LDL + G +AE YFN L + K TYGALLNCY ++ T+++L
Sbjct: 101 GICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSL 160
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ +KM E+ F + + +N++ +Y +GQ EKV ++ +MKQ ++ DN +Y + + SY
Sbjct: 161 SHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRICINSY 220
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRD 283
+ +DI G+E+V EM + W TY+ A+ Y+KA L +KA ALKK EE + RD
Sbjct: 221 AAQSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRD 280
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQCFE 342
Y+ LISLY + N V R+W + KS N Y+ +L++L +L ++ ++
Sbjct: 281 GLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLR 340
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLR 402
EWES + YD R+ +++I Y +K ++E+A + ++ + S + Y+
Sbjct: 341 EWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTP--DSWGTVASGYMD 398
Query: 403 SRQLDLALNEMEAALS-EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+++ A+ M+AA+S +P + + ++ V+ E F L+ + +
Sbjct: 399 EGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPM 458
Query: 462 DFSAYSLLIKTYIAAGK 478
+ Y LI I AGK
Sbjct: 459 NRRMYHTLIMANIRAGK 475
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 258/486 (53%), Gaps = 17/486 (3%)
Query: 1 MMIRNQSRLI-STGSYL--VRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATG 57
M +R L+ S G+YL VR ++ R+ + +G D L +RL +L
Sbjct: 2 MQLRKTDTLLRSVGTYLAVVRHFSAS----AEARVGSAAASSSGGGDTLGRRLLSLVYPK 57
Query: 58 GSVTGALNAYIMEG-KTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSYTDFA 115
S A+N + EG + RK L VR LRK RY+HALEV EWM +K M D+A
Sbjct: 58 RSAVVAINKWKEEGHEPPRKYQLNRIVRELRKDKRYKHALEVCEWMTLQKDMKLVQGDYA 117
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
V+LDL K G+ +AEK+F L + + + T ALL+ Y + + ++A AL KM E
Sbjct: 118 VHLDLITKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLVDKAEALMLKMSECDL 177
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
L N + +N++ ++Y+ G+ EKV ++ ++K N S D +T+ +W+ + + ND++ ER
Sbjct: 178 LINPLPYNHMISLYISNGKLEKVPKIIQELKM-NTSPDIVTFNLWLAACASQNDVETAER 236
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD-RKAYHFLISLY 294
V E+ D W TYS L ++Y+K EKA +K++E R R AY L+SL+
Sbjct: 237 VLLELKKAKIDP-DWVTYSTLTNLYIKNASLEKAGATVKEMENRTSRKTRVAYSSLLSLH 295
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
N N D VNR+W +K++F N + Y+ ++ +L KL + + EWES + D+
Sbjct: 296 TNMGNKDDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAGAEDLYREWESVSGTNDV 355
Query: 354 RLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEM 413
R++++++ +Y+ +D E A N ++ + + E F YL+ + ++ L+
Sbjct: 356 RVSNILLGSYINQDQMEMAEDFCNQIVQKGVIPC--YTTWELFTWGYLKRKDVEKFLDYF 413
Query: 414 EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTY 473
A+S + W P Q V F+ EE+ GAE+ +L++ ++ + Y+L +KTY
Sbjct: 414 SKAISSVTK--WSPDQRLVQEAFKIIEEQAHTKGAEQLLVILRNAGHVNTNIYNLFLKTY 471
Query: 474 IAAGKL 479
AGK+
Sbjct: 472 ATAGKM 477
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 237/440 (53%), Gaps = 15/440 (3%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
+ +Y+R+S + LN + EGK + K L V+ LRKF R++ ALEV EWM
Sbjct: 58 NAVYRRISLMENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMN 117
Query: 104 SRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
+R F S +D A+ LDL AK G+++AE YF+ L + K++ YGALLN Y + M +
Sbjct: 118 NRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRD 177
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+A L EK+ + + FN + T+Y+ L + +KV+ ++++M +NI LD +Y +W+
Sbjct: 178 KAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWL 237
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
S + +E+VF +M E WTT+S +A++Y+K FEKAE LKK+E +
Sbjct: 238 SS---CESTERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRIT 294
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQ 339
RDR YH+LISLY +T N V R W I KS FP N Y L+ +L ++ ++ ++
Sbjct: 295 NRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEK 354
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN---AKKRANASARFFKSRESF 396
+EEW S SSYD R+ ++++ Y+++ E+A ++ A + N++ + +
Sbjct: 355 IYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNT 414
Query: 397 MIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
+ +++ AL+ + A+ W+P V V F EEE D E +L+
Sbjct: 415 GV-----KKISDALSCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLR 469
Query: 457 SLNCLDFSAYSLLIKTYIAA 476
+ CL+ Y+ L + +
Sbjct: 470 QMGCLEDEPYASLFGLHTGS 489
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 235/442 (53%), Gaps = 6/442 (1%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY ++S LG S+ L+ ++ +G VR L+ +R LRK R+ ALEV EWM +
Sbjct: 16 LYSKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRNRFTQALEVSEWMNKK 75
Query: 106 KM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
+ FS T+ AV LDL K G +AE YFN L ++ K TYGALLNCY ++ T+R++
Sbjct: 76 GICIFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALLNCYVRQRQTDRSI 135
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ ++KM E+ + +A+N++ +Y+ LG EKV ++ +MK+ IS DN +Y + + SY
Sbjct: 136 SHWQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKISPDNFSYRICINSY 195
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRD 283
+DI G+E+V EM + W TY+ +A+ Y+KA L +KA AL+K EE + +D
Sbjct: 196 GARSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAGLADKAVDALRKSEEKLDKKD 255
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQCFE 342
Y+ LISLY V R+W + KS N ++ +L++L KL ++ ++ +
Sbjct: 256 GIGYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLESLVKLGDLEEAEKVLK 315
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLR 402
EWES + YD+R+ ++++ Y + ++E+A ++ A+ S YL
Sbjct: 316 EWESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATTP--NSWAMIASGYLE 373
Query: 403 SRQLDLALNEMEAALS-EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+ A M+AA S ++ W+P V + +E + E F L L
Sbjct: 374 KGEKAKAFECMKAAFSLNVEKKGWKPNPRVVMDILIWLGDEGSPEDVEAFVASLSVAIPL 433
Query: 462 DFSAYSLLIKTYIAAGKLASDM 483
+ Y L+K I +G+ A ++
Sbjct: 434 NRQIYHALLKAKIRSGRDAHEI 455
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 229/436 (52%), Gaps = 5/436 (1%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY R+S LG S+ L+ ++ EGK VR L +R LR RY ALEV EWM S+
Sbjct: 39 LYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK 98
Query: 106 KM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
++ FS + AV LDL + G+ +AE YFN +S K YGALLNCY +E + +++L
Sbjct: 99 ELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSL 158
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ +KM EL F + +N L +Y+ Q EK+ ++++M++ IS DN +Y + + SY
Sbjct: 159 SHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSY 218
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR 284
+D++ +E++ EM ++ W TYS +A+ Y+KA L EKA LKK E +D
Sbjct: 219 GARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHKDP 278
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEE 343
Y+ LISLY + + + R+W K+ N Y+ +L +L KL ++ + +E
Sbjct: 279 LGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKE 338
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRS 403
WES + YD R+ + ++ + QK + E+A + + + S Y+
Sbjct: 339 WESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTP--NSWSIVAAGYIEK 396
Query: 404 RQLDLALNEMEAALSE-AKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD 462
+ ++ A M+ A++ A+ WRP + + + + +DV+ E F LK++ +D
Sbjct: 397 QNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMD 456
Query: 463 FSAYSLLIKTYIAAGK 478
Y I+ I AGK
Sbjct: 457 REMYHAQIRASIRAGK 472
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 233/436 (53%), Gaps = 6/436 (1%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
P + +YK++S + LN + G+ + K L V+ LRK+ R ALEV
Sbjct: 62 PIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEV 121
Query: 99 IEWMESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
+WM +R F S +D A+ LDL K GI AE++F L E K+R YG+LLN Y +
Sbjct: 122 YDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVR 181
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E+A AL M + + + + FN + T+Y+ L + +KV +V +MKQ++I LD +
Sbjct: 182 AKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYS 241
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y +W+ S L ++ +E V+ +M ++ WTT+S +A++Y+K EKAE AL+K+
Sbjct: 242 YNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKV 301
Query: 277 E-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAI 334
E + R+R YH+L+SLY + N + RVW + KS P N Y L+ +L ++ I
Sbjct: 302 EARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDI 361
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRE 394
+ ++ +EEW SSYD R+ ++++ AY++ D E A +F++ + + + E
Sbjct: 362 EGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSS--STWE 419
Query: 395 SFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
+ + R R + AL + A S +WRP + + FF+ EEE DV E ++
Sbjct: 420 ILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLEL 479
Query: 455 LKSLNCLDFSAYSLLI 470
L+ L+ +Y LI
Sbjct: 480 LRQSGDLEDKSYLALI 495
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 233/436 (53%), Gaps = 6/436 (1%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
P + +YK++S + LN + G+ + K L V+ LRK+ R A+EV
Sbjct: 62 PIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQAIEV 121
Query: 99 IEWMESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
+WM +R F S +D A+ LDL K GI AE++F L E K+R YG+LLN Y +
Sbjct: 122 YDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVR 181
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E+A AL M + + + + FN + T+Y+ L + +KV +V +MKQ++I LD +
Sbjct: 182 AKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYS 241
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y +W+ S L ++ +E V+ +M ++ WTT+S +A++Y+K EKAE AL+K+
Sbjct: 242 YNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKV 301
Query: 277 E-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAI 334
E + R+R YH+L+SLY + N + RVW + KS P N Y L+ +L ++ I
Sbjct: 302 EARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDI 361
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRE 394
+ ++ +EEW SSYD R+ ++++ AY++ D E A +F++ + + + E
Sbjct: 362 EGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSS--STWE 419
Query: 395 SFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
+ + R R + AL + A S +WRP + + FF+ EEE DV E ++
Sbjct: 420 ILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLEL 479
Query: 455 LKSLNCLDFSAYSLLI 470
L+ L+ +Y LI
Sbjct: 480 LRQSGDLEDKSYLALI 495
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 231/439 (52%), Gaps = 12/439 (2%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
P + +Y+R+S + LN + EGK + K L V+ LRK+ R+ ALE+
Sbjct: 65 PMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEI 124
Query: 99 IEWMESRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
+WM +R+ F T D A+ LDL +K GI +AE+YF L + K+R YGALLN Y K
Sbjct: 125 YDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAK 184
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E+A L EKM F + + FN + T+Y+ + + EKV LV++M + +I LD +
Sbjct: 185 GRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYS 244
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y +W+ S + +E V+ +M + WTT+S +A++Y+K L EKAE L+++
Sbjct: 245 YNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRV 304
Query: 277 EE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAI 334
E + RDR YH+LISLY + N + + RVW I K+ FP N Y ++ AL ++ +
Sbjct: 305 ESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDV 364
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN---AKKRANASARFFK 391
+ ++ +EEW + S+YD R+A++ I Y+++ +A F++ + N+S
Sbjct: 365 EGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSS----- 419
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
+ E + + + ++ AL + A S WRP V +F E+E D+ E
Sbjct: 420 TWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVL 479
Query: 452 CKVLKSLNCLDFSAYSLLI 470
+L+ L Y+ LI
Sbjct: 480 VGLLRQPKYLQDKTYASLI 498
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 244/445 (54%), Gaps = 11/445 (2%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
G D L RL +L T S + + EG +VRK L VR LRK RY+HALE+
Sbjct: 57 VGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEIC 116
Query: 100 EWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL 158
EWM ++ + D+AV+LDL +K G+ +AEK+F + + + +LL+ Y +
Sbjct: 117 EWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNK 176
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
++++A ALFEKM E FL + + +N++ +MY+ GQ EKV L+ ++K R S D +TY
Sbjct: 177 LSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYN 235
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
+W+ +++ ND++G E+V+ + E + W TYS L ++Y K + EKA LALK++E+
Sbjct: 236 LWLTAFASGNDVEGAEKVYLK-AKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEK 294
Query: 279 M-KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDI 336
+ ++R AY LISL+ N + D VN W +KS+F N + YL ++ A+ KL +
Sbjct: 295 LVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQ 354
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRES 395
K ++EWES + D R+ ++I+ Y+ +D + +K N S + + E
Sbjct: 355 AKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPS---YSTWEI 411
Query: 396 FMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL 455
YL+ + ++ L+ A+ K+ W V + EE+ +V GAE+ +L
Sbjct: 412 LTWAYLKRKDMEKVLDCFGKAIDSVKK--WTVNVRLVKGACKELEEQGNVKGAEKLMTLL 469
Query: 456 KSLNCLDFSAYSLLIKTYIAAGKLA 480
+ ++ Y+ L++TY AG++A
Sbjct: 470 QKAGYVNTQLYNSLLRTYAKAGEMA 494
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 145/445 (32%), Positives = 244/445 (54%), Gaps = 11/445 (2%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
G D L RL +L T S + + EG +VRK L VR LRK RY+HALE+
Sbjct: 57 VGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEIC 116
Query: 100 EWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL 158
EWM ++ + D+AV+LDL +K G+ +AEK+F + + + +LL+ Y +
Sbjct: 117 EWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNK 176
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
++++A ALFEKM E FL + + +N++ +MY+ GQ EKV L+ ++K R S D +TY
Sbjct: 177 LSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYN 235
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
+W+ +++ ND++G E+V+ + E + W TYS L ++Y K + EKA LAL+++E+
Sbjct: 236 LWLTAFASGNDVEGAEKVYLK-AKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALREMEK 294
Query: 279 M-KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDI 336
+ ++R AY LISL+ N + D VN W +KS+F N + YL ++ A+ KL +
Sbjct: 295 LVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQ 354
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRES 395
K ++EWES + D R+ ++I+ Y+ +D + +K N S + + E
Sbjct: 355 AKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPS---YSTWEI 411
Query: 396 FMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL 455
YL+ + ++ L+ A+ K+ W V + EE+ +V GAE+ +L
Sbjct: 412 LTWAYLKRKDMEKVLDCFGKAIDSVKK--WTVNVRLVKGACKELEEQGNVKGAEKLMTLL 469
Query: 456 KSLNCLDFSAYSLLIKTYIAAGKLA 480
+ ++ Y+ L++TY AG++A
Sbjct: 470 QKAGYVNTQLYNSLLRTYAKAGEMA 494
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 256/479 (53%), Gaps = 16/479 (3%)
Query: 9 LISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYI 68
L S GSYL TE + + A + G D L +RL +L S A+N +
Sbjct: 3 LRSVGSYLATTARHLSTEPARRGVTAASSSSGG--DTLGRRLLSLVYPKRSAVIAINKWK 60
Query: 69 MEGKTV-RKDMLEYCVRSLRKFGRYRHALEVIEWME-SRKMHFSYTDFAVYLDLTAKTNG 126
EG T+ RK L +R LRK RY+HALEV EWM+ + D+AV LDL K G
Sbjct: 61 EEGHTLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGDYAVQLDLITKVRG 120
Query: 127 IAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
+ +AEK+F L + + + T ALL+ Y + +T +A AL KM E FL + V +N +
Sbjct: 121 LNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTNKAEALMSKMSECGFLRSPVPYNRMM 180
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
++Y+ G+ EKV L ++K N S D +T+ + + + + ND++ ERV ++ D
Sbjct: 181 SLYISNGKLEKVPKLFEELKV-NTSPDVVTFNLLLTACASENDVETAERVLLQLKKAKVD 239
Query: 247 KCRWTTYSNLASIYVKA----ELFEKAELALKKLEEMKPRD-RKAYHFLISLYCNTSNLD 301
W TYS L ++Y++ + EKA LK++E+ R+ R AY L+SL+ N N+D
Sbjct: 240 P-DWVTYSTLTNLYIRNASVDDCLEKAASTLKEMEKRTSRETRVAYSSLLSLHANMGNVD 298
Query: 302 AVNRVWGILKSTF-PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
VNR+WG +K+ F ++ Y+ ++ +L KL ++ ++EWES + D+R++++++
Sbjct: 299 EVNRIWGKMKACFCKMSDDEYVCMISSLVKLGDFAGVENLYKEWESVSGTNDVRVSNLLL 358
Query: 361 RAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEA 420
+Y+ + E A + N ++ + + S E YL+ + + L+ A+S
Sbjct: 359 TSYVDQGQMEMAEIFCNQLVEKGVCLS--YSSWELLTRGYLKKKDVKKFLHYFGKAISSV 416
Query: 421 KQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
KQ W P V F +E+ ++GAE+ +L++ ++ + Y+L +KTY AAGK+
Sbjct: 417 KQ--WIPDPRLVQEAFTVIQEQAHIEGAEQLLVILRNAGHVNTNIYNLFLKTYAAAGKM 473
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 231/429 (53%), Gaps = 6/429 (1%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
D LY R+S G S+ L ++ EG V+K L+ V+ LRK+ R+ HAL+V EWM
Sbjct: 39 DTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMT 98
Query: 104 SRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
+K D AV LDL +K +G+ AE+YFN + + +++R YGALLNC + +
Sbjct: 99 DKKGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLGK 158
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A A +KM +L F+ N++++N + ++Y +G EK+ PLV +M++ IS D +TY + +
Sbjct: 159 AEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLN 218
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR 282
+ + +DI+G+E++ +M + + Y A+ Y+KA L +K + LK+ E++
Sbjct: 219 ACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISG 278
Query: 283 D--RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
+ R AY FL++LY + N V R+W K N+ Y+ ++ +L KL+ ID ++
Sbjct: 279 NTRRFAYEFLLTLYTASGNKAEVYRIWNKYKEIGRFFNSGYICMISSLLKLDDIDGAERI 338
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY 400
FEEW+S+ +D+R+ + ++ Y +K E+A N K A+ S Y
Sbjct: 339 FEEWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYIN--KIVASGEEPDATSWNHLAAGY 396
Query: 401 LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC 460
S Q+ A+ + A+S +K W+P +T+ F + + D + EE K+ K C
Sbjct: 397 HSSGQMTKAVETIRKAISVSKP-GWKPSLLTLSACLEFLKGQGDAETLEELLKIAKEHCC 455
Query: 461 LDFSAYSLL 469
AY+ L
Sbjct: 456 FSAGAYAKL 464
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 231/438 (52%), Gaps = 5/438 (1%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
T D L R+ L S T L +I +G V L R L K R++HALE++
Sbjct: 7 TCKRDDLTSRMLKLVFPRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEIL 66
Query: 100 EWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL 158
WME++ + S D A+ L+L K +A AE+YF L + + LL+ Y KE
Sbjct: 67 AWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKER 126
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
E+A AL K+++L + FN + +Y+ Q E+V ++ QMKQ I L+ L+Y
Sbjct: 127 AIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYN 186
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE- 277
+WM + S ++ + E V+ +M ++ + W+T S LA+IY+K+ L +KA LALK E
Sbjct: 187 LWMSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEK 246
Query: 278 EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDI 336
++ +R Y FLI++Y + SN + V R+W K T+T+Y+ +L L KL I
Sbjct: 247 KLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAE 306
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESF 396
++ F EWES+C YD+R+++V++ AY++ ++A + + +R +K+ E
Sbjct: 307 AERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPN--YKTWEIL 364
Query: 397 MIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
M +++S+ +D A+N M+ S K WRP V R+ EE +V+ ++ KV+
Sbjct: 365 MEGWMKSQNMDKAINAMKKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKVIH 424
Query: 457 SLNCLDFSAYSLLIKTYI 474
L Y L++ ++
Sbjct: 425 QLGVAKLPLYKSLLRMHL 442
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 236/439 (53%), Gaps = 9/439 (2%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
D L +RL +L S + + EG VRK L VR LRK RY+HALEV EWM
Sbjct: 40 DTLGRRLFSLVYGKRSAVITIRKWKEEGHNVRKYELNRIVRELRKLKRYKHALEVCEWMT 99
Query: 104 SRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
+ + D+AV+LDL AK G+ +AEK+F + + ++ ALL+ Y + +
Sbjct: 100 KQSDIKLVPGDYAVHLDLIAKIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISK 159
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A AL EKM E FL N + +N++ ++Y+ GQ EKV ++ ++K++ S D +TY +W+
Sbjct: 160 AEALMEKMSECGFLKNALPYNHMLSVYVANGQLEKVAEIIQELKKKT-SPDVVTYNMWLT 218
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKP 281
+ + ND++ E+VF E+ D W TYS L ++Y+K E EKA LK++E+
Sbjct: 219 ACASQNDVETAEKVFMELKKSKLDP-DWVTYSTLTNLYIKKECLEKAAYTLKEVEKRASK 277
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDILKQC 340
++R Y L+SL+ N + D ++R W +KS F N + Y ++ +L KL +
Sbjct: 278 KNRVTYSSLLSLHANMKDKDGLHRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAENL 337
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY 400
+ EWES ++ D R++++++ +Y+ ++ E+A ++ + + E +
Sbjct: 338 YNEWESVSATRDSRVSNIVLASYINRNQMEDAENFCQRMVQKGITPC--YTTWELLTCGH 395
Query: 401 LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC 460
L++ Q++ L + AL ++ W P + + F+ EE D++GAE+ +L+
Sbjct: 396 LKTEQMEKVLENFKKALCSVRK--WTPDKRLIGDIFKNLEERGDIEGAEKLLVILRDAGH 453
Query: 461 LDFSAYSLLIKTYIAAGKL 479
+ Y+ L++TY AGK+
Sbjct: 454 VSTMIYNSLLRTYAKAGKM 472
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 215/390 (55%), Gaps = 8/390 (2%)
Query: 89 FGRYRHALEVIEWMESRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYT 146
F + A +V +WM R+ FS + D A+ LDL AK G++ AE+YF L + K++ T
Sbjct: 140 FHTHSLAKDVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRT 199
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
YG+LLN Y + +M E+ + FE+M + F +T+ FN L Y+ + EKV L+++M
Sbjct: 200 YGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMM 259
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
+RN++ D TY +W++S + + D D +E+VF +M + WTTY+ LAS+++K
Sbjct: 260 ERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNS 319
Query: 267 EKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVL 324
EKAE +LK+ E+ R++K +H+L++LY + + V RVW K+TFP N Y +
Sbjct: 320 EKAEESLKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEV 379
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRA 383
L AL +L I+ + +EEW S+ SS+D + ++++ Y ++ +A N +K
Sbjct: 380 LSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGG 439
Query: 384 NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEK 443
N + E YL+ Q AL+ +E A + A WRP V++ F+E+
Sbjct: 440 NPKPNTW---EILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKEKN 496
Query: 444 DVDGAEEFCKVLKSLNCLDFSAYSLLIKTY 473
D + A+ VL+S C + Y LI TY
Sbjct: 497 DAESADRLMNVLRSRRCEENEEYKSLINTY 526
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 216/400 (54%), Gaps = 26/400 (6%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAA 129
G +R LE V+ LRK R+R ALEV EWM ++ + F D AV+LDL + +G +A
Sbjct: 91 GNRLRHVELERIVKELRKRRRHRQALEVSEWMNAKGHVKFLPKDHAVHLDLIGEIHGSSA 150
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
AE YFN L + K YGALLNCY +EL+ E++LA F+KM EL F+ +T+ +NN+ +Y
Sbjct: 151 AETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLY 210
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK-- 247
LGQ EKV ++ +MK I DN +Y + + SY D G+E EM ECE K
Sbjct: 211 TNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFGMENTLEEM--ECEPKIV 268
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
W TY+ +AS Y+K + EKA ALKK E ++ +D +Y+ LISLY + + VNR+
Sbjct: 269 VDWNTYAVVASNYIKGNIREKAFSALKKAEAKINIKDSDSYNHLISLYGHLGDKSEVNRL 328
Query: 307 WGI-LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
W + + + N Y +L L KLN I+ + +EWES +++D ++ +V++ Y Q
Sbjct: 329 WALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSGNAFDFQVPNVLLTGYRQ 388
Query: 366 KDMYEEAALIFNNAKKR---------ANASARFFKSRESFMIYYLRSRQLDLALNEMEAA 416
KD+ ++A + ++ K+ A +A + + ++ Y L L +
Sbjct: 389 KDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAEKGDAAKAYELTKNALCVY------- 441
Query: 417 LSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
A W P ++ ++ +E DV+ E F +LK
Sbjct: 442 ---APNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDLLK 478
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 235/439 (53%), Gaps = 7/439 (1%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
P + +Y+R+S LN + EG+ + K L V+ LRK+ R+R ALEV
Sbjct: 76 PIVGWNDVYRRISLNPNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFRRALEV 135
Query: 99 IEWMESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
+WM +R F S +D A+ LDL AK G+++AE +F L + K++ TYGALLN Y
Sbjct: 136 YDWMNNRPERFRVSESDAAIQLDLIAKVRGLSSAEAFFLSLEDKLKDKKTYGALLNVYVH 195
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E+A +LF+ M ++ + + FN + T+Y+ L + KV L ++M ++NI LD T
Sbjct: 196 SRSKEKAESLFDTMRSKGYVIHALPFNVMMTLYMNLNEYAKVDILASEMMEKNIQLDIYT 255
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y +W+ S ++ +E+VF +M + W+T+S +AS+Y++ + EKAE L+K+
Sbjct: 256 YNIWLSSCGSQGSVEKMEQVFEQMEKDPSIIPNWSTFSTMASMYIRMDQNEKAEECLRKV 315
Query: 277 E-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAI 334
E +K RDR +H+L+SLY + D V RVW KS FP N Y ++ +L KL+ I
Sbjct: 316 EGRIKGRDRIPFHYLLSLYGSVGKKDEVCRVWNTYKSIFPSIPNLGYHAIISSLVKLDDI 375
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRE 394
++ ++ +EEW S SSYD R+ +++I Y++K ++A F + + E
Sbjct: 376 EVAEKLYEEWISVKSSYDPRIGNLLIGWYVKKGDTDKALSFFEQMLN--DGCIPNSNTWE 433
Query: 395 SFMIYYLRSRQLDLALNEM-EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCK 453
++ +++ A++ + EA ++ WRP + F +E+ D++ AE
Sbjct: 434 ILSEGHIADKRISEAMSCLKEAFMAAGGSKSWRPKPSYLSAFLELCQEQDDMESAEVLIG 493
Query: 454 VLKSLNCLDFSAYSLLIKT 472
+L+ Y+ LI +
Sbjct: 494 LLRQSKFNKSKVYASLIGS 512
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 248/442 (56%), Gaps = 9/442 (2%)
Query: 41 GNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIE 100
G D L +RL +L S A+ + EG+TVRK L VR LRK RY+HALEV E
Sbjct: 45 GGRDTLGRRLMSLIFPKRSAVTAIRKWQEEGRTVRKYELNRNVRELRKLKRYKHALEVCE 104
Query: 101 WMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
WM +K M D+AV+LDL K G+ AEK+F L + + + +LL+ Y + +
Sbjct: 105 WMTLQKDMRLVPGDYAVHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNL 164
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
+E+A AL EKM E FL + ++FN++ ++++ Q EKV L+ +K +N D +TY +
Sbjct: 165 SEKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPALIEGLK-KNTKPDVVTYNL 223
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM 279
+ + ND + E +F EM + + + W ++S LA++Y K +L EKA LK++E+M
Sbjct: 224 LLNVCTLQNDTEAAENIFLEM-KKTKIQPDWVSFSTLANLYCKNQLTEKAAATLKEMEKM 282
Query: 280 K-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDIL 337
+R + L+SLY N + + V R+W LKS+F ++ Y+ ++ +L KLN ++
Sbjct: 283 AFKSNRLSLSSLLSLYTNLGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEA 342
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFM 397
++ + EWES + D R+++V++ AY++K+ E+A +N ++ + + + E
Sbjct: 343 EKLYTEWESVSGTRDTRVSNVMLGAYIKKNQIEQAESFYNRMLQKGTVPS--YTTWELLT 400
Query: 398 IYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKS 457
YL+ Q++ L+ A++ K+ W + V + EE+ +++G E+ +L++
Sbjct: 401 WGYLKENQMEKVLHFFRKAVNRVKK--WNADERLVKGVCKKLEEQGNINGVEQLLLILRN 458
Query: 458 LNCLDFSAYSLLIKTYIAAGKL 479
+D Y+ L++TY AGK+
Sbjct: 459 AGHVDTEIYNSLLRTYAKAGKM 480
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 238/442 (53%), Gaps = 17/442 (3%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY +S LG SV L+ ++ +G V L+ VR LRK R+ AL+V EWM
Sbjct: 30 LYSVISPLGNQTTSVAPQLDDWVYKGNKVSVGELQRIVRDLRKRSRFTQALQVSEWMNKI 89
Query: 106 KM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
+ FS + AV+LDLT + +G AAE YFN L + +N T+GALLNCY ++ +++L
Sbjct: 90 GVCIFSPVEHAVHLDLTGRVHGFYAAETYFNSLKDIERNEKTHGALLNCYVRQRQVDKSL 149
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ +KM EL F +++ +NN+ +Y +GQ EKV + N+MK+ ++ DN +Y + + SY
Sbjct: 150 SHLKKMKELGFALSSLTYNNIMCLYTNIGQHEKVSDVFNEMKENHVLPDNFSYRICIGSY 209
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRD 283
+DIDG+ + EM ++ W TYS +A+ Y+KAEL +A AL+K E+ + +D
Sbjct: 210 GVRSDIDGMNAILKEMESQPHIVMDWNTYSVVANFYIKAELSSEAIDALRKCEKRLDDKD 269
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQCFE 342
+ Y+ LISLY + V R+W + KS N ++ +L++L KL D + +
Sbjct: 270 GEGYNHLISLYARLGKKNEVLRLWDMEKSACKRCLNRDFITMLESLVKLEEFDEADKILK 329
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY--- 399
EWE + YD + +V++ Y +KD E+A I + K+ R + S+++
Sbjct: 330 EWEFSGNCYDYGVPNVVVVGYSEKDFPEKAEAILQDIWKK-----RKYTDTSSWILVADR 384
Query: 400 YLRSRQLDLALNEMEAAL---SEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
YL +++ AL ++ A+ E K+ +P + + + + + V+ AE ++LK
Sbjct: 385 YLLKGEMEKALECLKTAVCLYPENKKR--KPNHRVISSIYSWIGDNASVEDAEALVRLLK 442
Query: 457 SLNCLDFSAYSLLIKTYIAAGK 478
+ Y L+K Y+ A K
Sbjct: 443 KFQ-KNRHMYHSLLKAYVRADK 463
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 228/419 (54%), Gaps = 16/419 (3%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHF--SYTDFA 115
GS + LN + EGK + K L V+ LRKF R++ ALEV EWM +R F S +D A
Sbjct: 7 GSAS-VLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLSSSDAA 65
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
+ LDL AK G+++AE YF+ L + K++ YGALLN Y + M ++A L EK+ +
Sbjct: 66 IQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGY 125
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ FN + T+Y+ L + +KV+ ++++M +NI LD +Y +W+ S + +E+
Sbjct: 126 ATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSS---CESTERMEQ 182
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLY 294
VF +M E WTT+S +A++Y+K FEKAE LKK+E + RDR YH+LISLY
Sbjct: 183 VFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHYLISLY 242
Query: 295 CNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
+T N V R W I KS FP N Y L+ +L ++ ++ ++ +EEW S SSYD
Sbjct: 243 GSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVKSSYDP 302
Query: 354 RLADVIIRAYLQKDMYEEAALIFNN---AKKRANASARFFKSRESFMIYYLRSRQLDLAL 410
R+ ++++ Y+++ E+A ++ A + N++ + + + +++ AL
Sbjct: 303 RIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGV-----KKISDAL 357
Query: 411 NEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLL 469
+ + A+ W+P V V F EEE D E +L+ + D A LL
Sbjct: 358 SCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGYEDDGAEMLL 416
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 232/436 (53%), Gaps = 7/436 (1%)
Query: 45 KLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-E 103
KLY R+ + S+ LN ++ EG TV K +L+ V ++ + R+ HALE+ WM +
Sbjct: 49 KLYDRIQIVRDPKESIIPVLNQWVSEGHTVGKALLQSLVHLMKGYKRFNHALEMSHWMTD 108
Query: 104 SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
R S +D AV L+L + G A AE YF +S+ K+ YGALL+ Y +E ++A
Sbjct: 109 CRYFSLSPSDVAVRLELIYRVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSVQKA 168
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
A+ ++M E ++ +N + +Y + G EK+ L +M++ I D T M +
Sbjct: 169 EAVLQEMREKGIATSSFPYNIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRNLMAA 228
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD 283
Y +DI G+ER+ ++ + W YS AS Y+K L EKA L+K+EE P
Sbjct: 229 YVAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKVGLIEKALKMLRKMEETMPIG 288
Query: 284 RK--AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+K A+++L++LY T D + RVW K T + ++ +L K++ I+ ++ F
Sbjct: 289 KKTSAFNYLLTLYAKTGRKDELYRVWNSYKPLAEVKETQFCCMISSLEKVDDIEGAERIF 348
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYL 401
EEWES+C YD R+ + ++ AY +K +Y +A KK A + + + + Y+
Sbjct: 349 EEWESQCMMYDFRVLNKLLLAYCRKGLYTKAE---AAFKKAAEGRTPYASTWITMAMSYI 405
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
Q+ A+ ++ A+S +++ W+P +T+ T + EE+ DV+G EE K LKS L
Sbjct: 406 GQNQMSKAVEMLKKAISVSRK-GWKPNPITLTTCLDYLEEQGDVEGIEEIVKSLKSTESL 464
Query: 462 DFSAYSLLIKTYIAAG 477
Y L++TY AAG
Sbjct: 465 TRDIYHRLVRTYTAAG 480
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 208/391 (53%), Gaps = 12/391 (3%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESRKMHFSY--TDFAVYLDLTAKTNGIAAAEKYFNG 136
L+ V+ LRK R+R ALEV EWM S K H + D A++LDL + +G+ AAE YFN
Sbjct: 82 LQRIVKELRKRRRHRQALEVSEWM-SLKGHVKFLPKDHAIHLDLIGQIHGVEAAETYFNN 140
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
LS+ K YGALLNCY +EL+ ++ALA F M EL F+ +T+ +N+L +Y R+GQ E
Sbjct: 141 LSDKDKTEKPYGALLNCYTRELLVDKALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHE 200
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK--CRWTTYS 254
+V ++ +MK I DN +Y + + SY D G+E EM ECE + W TY+
Sbjct: 201 RVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEM--ECEPQIVVDWNTYA 258
Query: 255 NLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
+AS Y+K +L EKA AL K E ++ +D AY LISLY N + R+W + S
Sbjct: 259 VVASNYIKGDLREKAYSALSKAEAKLDKQDPDAYRHLISLYGNLGDKSEAKRLWAVQMSN 318
Query: 314 FPP-TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
N Y+ +L L KL+ I + +EWES +S+D R+ +V++ Y QK + ++A
Sbjct: 319 CKRYINRDYMNMLSVLVKLDEITEAEDLLKEWESSQNSFDFRVPNVLLTGYRQKALLDKA 378
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALS-EAKQFHWRPMQVT 431
++ + K+ S I Y + A + ALS A W P
Sbjct: 379 EMLLDGFLKKGKTPPS--TSWGIVAIGYAEKGDVAKAYEMTKNALSVHAPNTGWIPRPSM 436
Query: 432 VDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD 462
++ ++ +E +V E F +LK+ +D
Sbjct: 437 LEMILKYLGDEGEVKDVEAFVSLLKAAVPVD 467
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 237/457 (51%), Gaps = 6/457 (1%)
Query: 31 RIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFG 90
R + +P L ++ L + G ++T L +I G V L Y L K
Sbjct: 16 RSLSTSPKNGYTNSNLKNQIMKLKSPGLNITSILQKWIDNGHKVTVSQLRYINGLLVKSK 75
Query: 91 RYRHALEVIEWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYG- 148
RY+HALE+ WME++K S +D+A+ L+L K NGI AE+YFN + + R
Sbjct: 76 RYKHALEIFTWMETQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASF 135
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
ALL+ Y K +A AL K+ L + N FN + +Y+ Q EKV +++QMK+
Sbjct: 136 ALLHGYVKVKDVVKAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRN 195
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
I+L+ L+Y +WM SY ++ + VE V+ EM N+ + W+T + LA+IY KA + +K
Sbjct: 196 KIALNLLSYNLWMSSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDK 255
Query: 269 AELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQ 326
A LALK E+ + Y FL++ Y + N + V R+W K T +Y+ +L
Sbjct: 256 ALLALKNAEKILSTSHLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLS 315
Query: 327 ALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANAS 386
L K+ + ++ F +WE C YD+R+++V++ AY++K + +A + + R
Sbjct: 316 CLVKVGDLLEAEKVFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCP 375
Query: 387 ARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVD 446
+K+ E M +++S+++D A++ M A+S + HWRP + + E ++ +
Sbjct: 376 N--YKTLEILMEGWVKSQKMDKAIDAMTQAISMLEHCHWRPSHGIIMSIAEHLERNRNFE 433
Query: 447 GAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
A F +V+ L Y +L++ ++ A + A D+
Sbjct: 434 DANHFIQVIHHLGVASLPLYKVLLRMHLHAQRAAFDI 470
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 236/447 (52%), Gaps = 13/447 (2%)
Query: 36 TPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHA 95
TP P D L +R++ G S+ L+ ++ +G V+ L ++ LRKF R+ HA
Sbjct: 31 TPSPLDPYDTLQRRVARAGDPSASIIRVLDGWLDQGHLVKTSELHGIIKMLRKFSRFSHA 90
Query: 96 LEVIEWMESRKMH-FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCY 154
L++ +WM ++H + D A+ LDL AK G+ AEK+F + +N + YGALLNCY
Sbjct: 91 LQISDWMSEHRVHEITEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCY 150
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
+ + +A +F++M EL FL + +N + +Y+R G+ V L+ +M+ + D
Sbjct: 151 ASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDGTVKPDI 210
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
T + +YS ++D++G+E+ + W TY++ A+ Y+KA L EKA L+
Sbjct: 211 FTVNTRLHAYSAVSDVEGMEKFLMRCEADTGLHLDWRTYADTANGYIKAGLTEKAIEMLR 270
Query: 275 KLEEM-KPRDRK-AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLN 332
K E+M PR RK AY L+S Y + V R+W + K NT Y+ ++ AL K++
Sbjct: 271 KSEQMVNPRKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMD 330
Query: 333 AIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN--AKKRANASARFF 390
I+ +++ EEWE+ S +D+R+ ++I Y +K M E+A + N K R ++ +
Sbjct: 331 DIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNMLVQKWRVEDTSTW- 389
Query: 391 KSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE 450
E + Y + +++ A+ + + A+ +K WRP QV + + + E +D+ E
Sbjct: 390 ---ERLALGYKMAGEMEKAVEKWKRAIDVSKP-GWRPHQVVLMSCVDYLEGRRDM---ES 442
Query: 451 FCKVLKSLNCLDFSAYSLLIKTYIAAG 477
K+L+ L+ +Y L+ AG
Sbjct: 443 LRKILRLLSERGHISYDQLLYDMNGAG 469
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 254/441 (57%), Gaps = 13/441 (2%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM- 102
D L +R+ +L + S A+ + EG V+K L VR LRK RY+HALEV EWM
Sbjct: 36 DTLGRRIFSLVYSKRSAVIAIRKWKTEGHKVQKYQLNRIVRELRKMKRYKHALEVCEWMT 95
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCY--CKELMT 160
+ R++ D+AV+LDL AK G+ +AEK+F L + + T ALL+ Y CK+++
Sbjct: 96 QERELKLLPGDYAVHLDLVAKVRGLTSAEKFFEDLPDEMRGWQTCTALLHTYVKCKDVV- 154
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
+A AL EKM + F+ N + +N++ ++Y+ G+ +K + +V ++K ++ + D +T+ +W
Sbjct: 155 -KAEALMEKMRDCSFVKNPLPYNHMISLYIADGEFDKAKRIVEELK-KSTTPDVVTFNLW 212
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
+ + LND++ ++V E+ + + + W TYS L ++Y+K +L E A LK++E+
Sbjct: 213 LSMCASLNDVESAKKVLLEL-KKLKIEADWITYSTLTNLYLKNKLLEDAVSTLKEMEKRA 271
Query: 281 PR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDILK 338
R +R AY L+SLY N + DAV+R+W +KS F N + Y +L +L KL I+ +
Sbjct: 272 SRKNRLAYSSLLSLYTNMGDKDAVHRIWNKMKSLFCKMNDAEYTCMLSSLIKLEEIEKAE 331
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMI 398
+ EWES + D ++A++++ AY+ ++ E++ + ++ + + E
Sbjct: 332 NLYTEWESVSGTGDPQVANILLAAYINRNQIEDSENFYRRMVEKGVCPC--YTTWELLTW 389
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
+L+++Q++ L+ + A++ K W P + V F+ EE+ + +GAEEF +L++
Sbjct: 390 GHLKTKQMEKVLDCFKKAITIVKT--WSPDKRLVREVFKILEEKGNAEGAEEFLVMLRNA 447
Query: 459 NCLDFSAYSLLIKTYIAAGKL 479
+ Y+ L++TY AGK+
Sbjct: 448 GYVSTEIYNSLLRTYAKAGKM 468
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 237/453 (52%), Gaps = 10/453 (2%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
P + +Y+R+S LN + EG+ + K L V+ LRK+ R+ ALEV
Sbjct: 75 PIVRWNDVYRRISLNQNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFPRALEV 134
Query: 99 IEWMESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
+WM +R F S +D A+ LDL AK G+++AE +F L + K++ TYGALLN Y
Sbjct: 135 YDWMNNRPERFRVSESDAAIQLDLIAKVRGVSSAEAFFLSLEDKLKDKRTYGALLNVYVH 194
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E+A +LF+ M ++ + + N + T+Y+ L + KV L ++M ++NI LD T
Sbjct: 195 SRSKEKAESLFDTMRSKGYVIHALPINVMMTLYMNLNEYAKVDMLASEMMEKNIQLDIYT 254
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y +W+ S ++ +E+VF +M + W+T+S LAS+Y++ EKAE L+K+
Sbjct: 255 YNIWLSSCGSQGSVEKMEQVFEQMERDPTIVPNWSTFSTLASMYIRMNQNEKAEKCLRKV 314
Query: 277 E-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAI 334
E +K RDR +H+L+SLY + D V RVW KS FP N Y ++ +L KL+ I
Sbjct: 315 EGRIKGRDRIPFHYLLSLYGSVGKKDEVYRVWNTYKSIFPRIPNLGYHAIISSLVKLDDI 374
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRE 394
+ ++ +EEW S SSYD R+ ++++ Y++KD ++A F + + E
Sbjct: 375 EGAEKLYEEWISVKSSYDPRIGNLLMGWYVKKDDTDKALSFFEQISN--DGCIPNSNTWE 432
Query: 395 SFMIYYLRSRQLDLALNEM-EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCK 453
++ +++ AL+ + EA + WRP + F +E+ D++ AE
Sbjct: 433 ILSEGHIADKRISEALSCLKEAFMVAGGSKSWRPKPSYLSAFLELCQEQNDMESAEVLIG 492
Query: 454 VLKSLNCLDFSAYSLLIKT---YIAAGKLASDM 483
+L+ Y+ +I + I G+L S +
Sbjct: 493 LLRQSKFSKIKVYASIIGSPDCTIDNGELQSKI 525
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 209/393 (53%), Gaps = 10/393 (2%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAA 129
G +R LE V+ LRK R+R ALEV EWM ++ + F D+AV+LDL + +GI A
Sbjct: 85 GNRLRPVELERIVKELRKRRRHRQALEVSEWMSAKGHVRFLPKDYAVHLDLIGQVHGIGA 144
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
AE YFN L + K YGALLNCY +ELM + +LA F+KM EL F+ +++ +NNL +Y
Sbjct: 145 AEAYFNTLPDKDKTEKPYGALLNCYTRELMVDGSLAHFQKMKELGFVFSSLPYNNLMGLY 204
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK-- 247
+GQ EKV ++ +MK I DN +Y + + SY D G+E +M ECE +
Sbjct: 205 TNIGQHEKVPSVIAEMKGSGIMPDNFSYRICINSYGTRADFFGMENTLEDM--ECEPQIV 262
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
W TY+ +AS Y+K L EKA ALKK E ++ +D Y+ LISLY + + R+
Sbjct: 263 VDWNTYAVVASNYIKGNLREKAISALKKAEAKIDIKDSDTYNHLISLYGQLGDKSEMRRL 322
Query: 307 WGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
WG+ S N Y +L L +L+ I+ + +EWES +++D + +V++ Y
Sbjct: 323 WGLQMSNCKRHINKDYTTMLAMLVRLDEIEEAEALLKEWESSENAFDFHVPNVLLTGYRH 382
Query: 366 KDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSE-AKQFH 424
KDM ++A + ++ K+ S I Y A ++ AL +
Sbjct: 383 KDMLDKAEALLDDFLKKGKMPPS--TSWAIVAIGYAEKGDCAKAYELIKNALCVYVPRSG 440
Query: 425 WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKS 457
W P ++ ++ +E D+ E F ++L++
Sbjct: 441 WIPRPAMIEMILKYLGDEGDLKDVETFVQLLQA 473
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 236/447 (52%), Gaps = 13/447 (2%)
Query: 36 TPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHA 95
TP P D L +R++ G S+ L+ ++ +G V+ L ++ LRKF R+ HA
Sbjct: 30 TPSPLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHA 89
Query: 96 LEVIEWMESRKMH-FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCY 154
L++ +WM ++H S D A+ LDL AK G+ AEK+F + +N + YGALLNCY
Sbjct: 90 LQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCY 149
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
+ + +A +F++M EL FL + +N + +Y+R G+ V L+ +M+ + D
Sbjct: 150 ASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDI 209
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
T + +YS ++D++G+E+ + W TY++ A+ Y+KA L EKA L+
Sbjct: 210 FTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLR 269
Query: 275 KLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLN 332
K E+M + + AY L+S Y + V R+W + K NT Y+ ++ AL K++
Sbjct: 270 KSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMD 329
Query: 333 AIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN--NAKKRANASARFF 390
I+ +++ EEWE+ S +D+R+ ++I Y +K M E+A + N K R ++ +
Sbjct: 330 DIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTW- 388
Query: 391 KSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE 450
E + Y + +++ A+ + + A+ E + WRP QV + + + E ++D++G
Sbjct: 389 ---ERLALGYKMAGKMEKAVEKWKRAI-EVSKPGWRPHQVVLMSCVDYLEGQRDMEG--- 441
Query: 451 FCKVLKSLNCLDFSAYSLLIKTYIAAG 477
K+L+ L+ +Y L+ AG
Sbjct: 442 LRKILRLLSERGHISYDQLLYDMNGAG 468
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 233/412 (56%), Gaps = 11/412 (2%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHF--SYTDFAV 116
S+ AL + EG+++++ L +R LR F RY HALE+ EW+ K +F S D A+
Sbjct: 50 SIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRD-KFYFDISPGDVAI 108
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
LDL +K +G+ AEKYFN ++ YGALLNCY ++ E+A A+ ++M ++ F+
Sbjct: 109 QLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFV 168
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
T+++N + +Y RLG+ EK+ L+ +M++ I LD+ TY + + +Y +D++G+E++
Sbjct: 169 -KTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKL 227
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRK-AYHFLISLY 294
++ + W Y A+ Y+KA+L EKA LKK E+ + R R+ Y L++LY
Sbjct: 228 LMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLY 287
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
N V R+W + K+ NT Y+ ++ +L KL+ +D ++ FEEW S +D R
Sbjct: 288 ATMGNKTEVYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFR 347
Query: 355 LADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEME 414
+ +++IRAY +K + E+A + + A ++ + ++ Y + Q++ A++ ++
Sbjct: 348 VPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAV--TWDALAAGYHENNQMEKAVDTLK 405
Query: 415 AALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAY 466
AL Q W+P VT+ + + + DV+ AE ++L+ + + SAY
Sbjct: 406 KALLATSQ-GWKPNPVTLSACLEYLKGKGDVEEAENLIRLLREQSLV--SAY 454
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/436 (31%), Positives = 222/436 (50%), Gaps = 6/436 (1%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ES 104
LY ++S LG SV L ++ GK V L V LR+ R+ HALEV +WM E+
Sbjct: 27 LYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNET 86
Query: 105 RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
FS T+ AV+LDL + G AE+YF L E KN TYGALLNCY ++ E++L
Sbjct: 87 GVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSL 146
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
FEKM E+ F+ +++ +NN+ +Y +GQ EKV ++ +MK+ N++ DN +Y + + ++
Sbjct: 147 LHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAF 206
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRD 283
+ D++ + +M + W TY+ A Y+ ++A LK E ++ +D
Sbjct: 207 GAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKD 266
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQCFE 342
+ Y+ LI+LY V R+W + K N YL +LQ+L K++A+ ++
Sbjct: 267 GEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLT 326
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLR 402
EW+S + YD R+ + +IR Y+ K M E+A + + +R A+ +S E Y
Sbjct: 327 EWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTP--ESWELVATAYAE 384
Query: 403 SRQLDLALNEMEAALS-EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
L+ A M+ AL E WRP V + + +E + E F L++ +
Sbjct: 385 KGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIGV 444
Query: 462 DFSAYSLLIKTYIAAG 477
+ Y L+K I G
Sbjct: 445 NKQMYHALVKADIREG 460
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 223/442 (50%), Gaps = 6/442 (1%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
T N LY R+S LG SV L+ +I EG V L + ++ LR R ALEV
Sbjct: 28 TTNRRNLYSRISPLGDPSISVVPVLDEWIEEGNAVDGPHLHHIIKILRTRNRNTQALEVS 87
Query: 100 EWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
EWM S+ + S D AV LDL + +G+ +AE+Y LS+ K +GALLNCY +E +
Sbjct: 88 EWMSSKGLPISSRDQAVQLDLIGRVHGVESAERYLQSLSDGDKTWKVHGALLNCYVREGL 147
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
+++L+L +KM ++ F+ + + +NN+ ++Y + Q EKV ++ QMK+ + + +Y +
Sbjct: 148 VDKSLSLMQKMKDMGFV-SFLNYNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNIFSYRI 206
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM 279
+ SY D+ VE++ EM E W TYS + + Y+KA++ EKA + L K E+
Sbjct: 207 CINSYCVRGDLANVEKLLEEMEREPHIGIDWITYSMVTNFYIKADMREKALVCLMKCEKK 266
Query: 280 KPRDRK-AYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDIL 337
R AY+ LIS + + R W + K+ N Y+ +L L KL +D
Sbjct: 267 THRGNTVAYNHLISHNAALRSKGGMMRAWKLQKANCKKQLNREYITMLGCLVKLGELDKA 326
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFM 397
++ EWE ++ D R+ ++++ Y Q+ + E+A + K A S
Sbjct: 327 EKVLGEWELSGNTCDFRVPNILLIGYCQRGLVEKAEALLR--KMVAEGKTPIPNSWSIVA 384
Query: 398 IYYLRSRQLDLALNEM-EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
Y+ ++ A M EA A+ WRP + + F + +D++ AE+F K
Sbjct: 385 SGYVAKENMEKAFQCMKEAVAVHAQNKRWRPKVDVISSIFSWVTNNRDIEEAEDFVNSWK 444
Query: 457 SLNCLDFSAYSLLIKTYIAAGK 478
S+N ++ Y L+K I GK
Sbjct: 445 SVNAMNRGMYLSLMKMCIRYGK 466
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 228/440 (51%), Gaps = 10/440 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY R+ A+ S++ LN +I EG+TV K L+ VR ++ F R+ HALE+ +WM R
Sbjct: 24 LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83
Query: 106 KMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
+ +F+ T D A+ LDL + +G AE YFN + K YGALL+ Y +E E+A
Sbjct: 84 R-YFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKA 142
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
A +KM E+ F ++ +N L +Y + G K+ L+ +M+ + I D T M +
Sbjct: 143 EATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVA 202
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD 283
Y +DI +E+ M + W YS AS Y+K L +KA LKK+E +P
Sbjct: 203 YVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 262
Query: 284 RK--AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ A+ FL+SLY T + + RVW + K ++ +Y ++ L KL+ I+ ++ F
Sbjct: 263 ERLSAFKFLLSLYARTGHKQELYRVWNLYKPSY-EYPEAYSCMITCLTKLDDIEGAEKIF 321
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYL 401
+EWE C+ YD R+ + ++ AY ++ ++++A + N K + + Y+
Sbjct: 322 QEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVN---KVIEERMPYASTWNILAKGYV 378
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+Q+ A+ ++ A+S ++ WRP + +D + E + +++ EE ++ K+L
Sbjct: 379 EDKQMPKAVEMLKKAISVGRK-GWRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGIP 437
Query: 462 DFSAYSLLIKTYIAAGKLAS 481
D + L++T A K S
Sbjct: 438 DGDIHHRLLRTSAAGEKSVS 457
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 235/469 (50%), Gaps = 13/469 (2%)
Query: 24 PTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCV 83
P AAPT P + ++ L G +V A+ + E V + L V
Sbjct: 22 PNPKPLSSTAAPTTDPREGDLLPWRLLRLRSPRGSAVAAAIERWAQERGHVSRPDLRRAV 81
Query: 84 RSLRKFGRYRHALEVIEWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
LR+ RY HALE++ WM+SRK ++ S D A LDL AK +G AE+Y+ L A
Sbjct: 82 SQLRRARRYDHALEILSWMDSRKDLNLSPLDHAARLDLIAKVHGTCHAEEYYKKLRNAAC 141
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
LL+CY E ++A + + + + +FN + +Y+ Q EK ++
Sbjct: 142 REAASFPLLHCYVAERNVQKAESFMASLQSIGLPVDPHSFNEMLKLYVATCQFEKALAVI 201
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ MK+ NI + L+Y +WM + S L + V+ VF EM N+ + W+T+ LA+I++K
Sbjct: 202 DLMKRSNIPRNVLSYNLWMNACSVLG-VASVQSVFKEMVNDGTVEVGWSTFCTLANIFIK 260
Query: 263 AELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST---FPPTN 318
L KA L+ E ++ PR R Y F+++ Y + D V R+W KS P N
Sbjct: 261 HGLNSKALACLRTAETKLSPRQRLGYSFVMTCYARLDDSDGVMRLWEASKSVPGRIPSAN 320
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCS-SYDMRLADVIIRAYLQKDMYEEAA-LIF 376
Y+ + K+ I + F WE+ C D+R+++V++ AY++ E+A L
Sbjct: 321 --YMSTIICSIKVGDIAQAEWIFGSWEAECGRKNDVRVSNVLLGAYVRNGWIEKAERLHL 378
Query: 377 NNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
+ +K A+ + +K+ E + +++SRQ+D A+N ++ ALS +K HWRP V+
Sbjct: 379 HMLEKGAHPN---YKTWEILLEGFVQSRQMDKAVNAIKKALSLSKSCHWRPPLELVEAIA 435
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
FFEE +VD A + KVL+ N Y +++ YI A + ++ +
Sbjct: 436 TFFEEHGNVDDANRYIKVLQKFNLTSLPLYKSVLRAYIKADAVPPNISE 484
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 232/412 (56%), Gaps = 11/412 (2%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHF--SYTDFAV 116
S+ AL + EG+++++ L +R LR F RY HALE+ EW+ K +F S D A+
Sbjct: 50 SIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRD-KFYFDISPGDVAI 108
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
LDL +K +G+ AEKYFN ++ YGALLNCY ++ E+A A+ ++M ++ F+
Sbjct: 109 QLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFV 168
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
T+++N + +Y RLG+ EK+ L+ +M++ I LD+ TY + + +Y +D++G+E++
Sbjct: 169 -KTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKL 227
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRK-AYHFLISLY 294
++ + W Y A+ Y+KA+L EKA LKK E+ + R R+ Y L++LY
Sbjct: 228 LMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLY 287
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
N R+W + K+ NT Y+ ++ +L KL+ +D ++ FEEW S +D R
Sbjct: 288 ATMGNKTEXYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFR 347
Query: 355 LADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEME 414
+ +++IRAY +K + E+A + + A ++ + ++ Y + Q++ A++ ++
Sbjct: 348 VPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAV--TWDALAAGYHENNQMEKAVDTLK 405
Query: 415 AALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAY 466
AL Q W+P VT+ + + + DV+ AE ++L+ + + SAY
Sbjct: 406 KALLATSQ-GWKPNPVTLSACLEYLKGKXDVEEAENLIRLLREQSLV--SAY 454
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 233/460 (50%), Gaps = 31/460 (6%)
Query: 37 PFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHAL 96
P P D LY+R+ +G ++ L + EG TV+K +++ V+ L R+ HAL
Sbjct: 40 PLP----DNLYRRIMNVGRPSIPLSPVLKQWDQEGHTVKKFVIQAIVKKLVGLRRFAHAL 95
Query: 97 EVIEWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYC 155
E+ WM R+ +H + D A LDL +K +G+ A +YF + + + YG+LL CY
Sbjct: 96 ELSFWMTDRRHLHLTAGDVAYRLDLISKVHGLEKAVEYFGMVPKRLRMPQCYGSLLKCYV 155
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
+ ++A F KM E+ + ++ + ++ +YL GQ E+V + M+++ + D
Sbjct: 156 EAKAVDKAEEHFAKMQEMG-MKSSYTYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDTF 214
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
+ + +Y D++GV +V + N E +W + AS+++K+ + +A +AL +
Sbjct: 215 SVESMLAAYIAAEDVEGVGKVL-DKANPHEKLVKWHGQALAASLFMKSGMQVRAVMALLE 273
Query: 276 LEE-MKPRD-RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNA 333
E + P+ R AY FL+ Y + V R+W + KS PP+NT YL + AL K+N
Sbjct: 274 AERRISPKSSRIAYAFLLKTYTDLGMYPEVGRIWSVYKSKVPPSNTMYLSRISALLKMND 333
Query: 334 IDILKQCFEEWESRCSSY-DMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA------- 385
ID + +EWE+ Y D RL ++++ AY ++ + E+A + ++A K+
Sbjct: 334 IDGAEATLKEWETVSLRYHDFRLINLMVDAYCREGLVEKAVALVDDAIKKGRTPYANTWY 393
Query: 386 --SARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEK 443
+ FFK+ E S+ +D+ +E+A W+P V F +K
Sbjct: 394 KLAGGFFKTGEV-------SKAVDMTRKALESATPP-----WKPDLTNVLMSLEHFMNQK 441
Query: 444 DVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
DV+ AEE +L+ L L Y L+KTY+ AGK SD+
Sbjct: 442 DVEAAEEIASMLQKLGPLTKEVYHCLLKTYVRAGKPVSDL 481
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 209/393 (53%), Gaps = 10/393 (2%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAA 129
G +R LE V+ LRK R+R ALEV EWM ++ + F D AV+LDL + +G+ A
Sbjct: 85 GNRLRPVELERIVKELRKRRRHRQALEVSEWMSAKGLVKFLPKDHAVHLDLIGQVHGVGA 144
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
AE YFN L++ K YGALLNCY +EL+ +++LA F+KM EL F+ +++ +NNL +Y
Sbjct: 145 AEAYFNKLADKDKTEKPYGALLNCYTRELLVDKSLAHFQKMKELGFVFSSLPYNNLMGLY 204
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK-- 247
LGQ EKV ++ +MK I DN +Y + + SY D G+E EM ECE +
Sbjct: 205 TNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGARADFFGMENTLEEM--ECEPQIV 262
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
W TY+ LA+ Y+K L +KA AL+K E ++ +D Y+ L+SLY + V R+
Sbjct: 263 VDWNTYAVLANNYIKGNLRDKAISALQKAEAKIDIKDSDTYNHLMSLYGQLGDKSEVKRL 322
Query: 307 WGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
W + S N Y +L L KL+ I+ + +EWES +++D + +V++ Y Q
Sbjct: 323 WALQMSNCKRHINKDYTTMLAMLLKLDEIEEAEALLKEWESSENAFDFHVPNVLLTGYRQ 382
Query: 366 KDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSE-AKQFH 424
KD+ ++A + ++ K+ S I Y + A + AL A
Sbjct: 383 KDLLDKAEALLDDFLKKGKMPTS--TSWAIVAIGYAEKGDVAKAYELTKNALCVYAPNSG 440
Query: 425 WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKS 457
W P ++ ++ +E ++ E F +L++
Sbjct: 441 WIPRPAMIEMILKYLGDECNLKDVETFVHLLQA 473
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 223/439 (50%), Gaps = 12/439 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ES 104
LY ++S LG SV L ++ GK V L V LR+ R+ HALEV +WM E+
Sbjct: 27 LYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNET 86
Query: 105 RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
FS T+ AV+LDL + G AE+YF L E KN TYGALLNCY ++ E++L
Sbjct: 87 GVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNEKTYGALLNCYVRQQNVEKSL 146
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
F+KM E+ F+ +++ +NN+ +Y +GQ EKV ++++MK+ N++ DN ++ + + ++
Sbjct: 147 LHFQKMKEMGFVSSSLTYNNIMCLYTNIGQHEKVPGVLDEMKEENVAPDNYSFRICINAF 206
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRD 283
++D++ + + +M + W TY+ A Y+ ++A LK E ++ +D
Sbjct: 207 GAMSDLERIGGILRDMERRPDFTMDWNTYAVAAKFYIDGGDCDRAVELLKMSEYRLEKKD 266
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQCFE 342
+ Y+ LI+LY N V R+W + K N YL +LQ+L K++ + +
Sbjct: 267 GEGYNHLITLYARLGNKIEVLRLWELEKEACKRRINQDYLTVLQSLMKIDGLKEAEVVLT 326
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY--- 399
EWES + YD R+ + +IR Y K M E+A + + +R + + ES+ +
Sbjct: 327 EWESSGNCYDFRVPNTVIRGYTGKSMEEKAEAMLEDLARRGKTT-----TPESWGLVATA 381
Query: 400 YLRSRQLDLALNEMEAALS-EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
Y L A M+ AL E + WRP V + + E + E F L++
Sbjct: 382 YAEKGALGNAFKCMKTALGIEVENRKWRPGLKLVTSVLSWLGGEGSLKEVESFVASLRNC 441
Query: 459 NCLDFSAYSLLIKTYIAAG 477
++ Y L+K I G
Sbjct: 442 IGVNKQMYHALVKADIREG 460
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 250/482 (51%), Gaps = 17/482 (3%)
Query: 2 MIRNQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVT 61
MIR +L S + L+ L ++T+S ++ P L +++ + A SV
Sbjct: 1 MIR---KLRSWNNNLISNLLIQTSKTLSLPFSSTPP----QLAILRQKIVNIRAPKISVV 53
Query: 62 GALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSYTDFAVYLDL 120
L ++ +G+ + K L+Y V ++ R+ HALE+ +WM R+ + S +D AV LDL
Sbjct: 54 PVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDRRYLSLSPSDAAVRLDL 113
Query: 121 TAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
+G+ AE YFN +S K YGALL CY +E E+A A+ ++M ++ +
Sbjct: 114 IHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAEAIMQEMRKMGIATTSF 173
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
A+N L +Y ++GQ +K+ L+ +MK + I D + +Y DI G+E++ +
Sbjct: 174 AYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAYVAKADISGMEKILKRI 233
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRK-AYHFLISLYCNTS 298
+ E K WT YS A+ Y+ A L +A LKK EE ++P K A+ FL+SLY T
Sbjct: 234 EEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNTNKFAFKFLLSLYERTG 293
Query: 299 NLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
+ + V RVW K T Y +++ +LAKL+ I+ ++ F+EWES+C+ YD R+ +
Sbjct: 294 HKNEVYRVWNTFKPLTKETCVPYALMITSLAKLDDIEGAERIFQEWESKCTVYDFRVLNR 353
Query: 359 IIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY-YLRSRQLDLALNEMEAAL 417
++ AY +K + ++A + N A F+S S + Y + A+ ++ A+
Sbjct: 354 LLVAYCRKGLLDKAESVVNQAVVERTP----FRSTWSILATGYAEYGHMSKAVEMLKKAI 409
Query: 418 SEAKQFHWRPMQVTV-DTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAA 476
+Q +W+P Q + + + E++ D + +E ++ KS + Y L++T IA
Sbjct: 410 LVGRQ-NWKPKQGDILEACLDYLEKQGDAETMDEIVRLCKSSGTVMKEMYYRLLRTSIAG 468
Query: 477 GK 478
GK
Sbjct: 469 GK 470
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 228/448 (50%), Gaps = 13/448 (2%)
Query: 36 TPFPTGNE--DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYR 93
TP G D L RL L + G+ A++ + E V + L+ V LR+ RY
Sbjct: 38 TPATAGEREGDPLSWRLLRL-RSPGAAAAAIDRWAQERGRVSRPDLQRAVSQLRRARRYG 96
Query: 94 HALEVIEWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLN 152
HALE++ WM+S K + D A LDL AK +G + AE+Y+N L A LL+
Sbjct: 97 HALEILSWMDSHKEIKLLPLDHAARLDLIAKVHGTSQAEEYYNKLPNSASREAASFPLLH 156
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
CY E ++A + + + + +FN + +Y+ + EKV +++ MK+ NI
Sbjct: 157 CYVAERNVQKAESFMASLQSIGLPVDPHSFNEMMKLYVATCEYEKVFSVIDLMKRNNIPR 216
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
+ L+Y +WM + S ++D+ V+ VF EM N+ + W+TY LA+I++K L KA
Sbjct: 217 NALSYNLWMNACS-VSDVTSVQSVFKEMVNDGTIEVGWSTYCTLANIFMKHGLNSKAFAC 275
Query: 273 LKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST---FPPTNTSYLVLLQAL 328
L+ E ++ R Y F+++ Y + D V R+W K P N Y+ + L
Sbjct: 276 LRTAETKLSTAQRLGYSFVMTCYAALGDSDGVMRLWEASKCVPGRIPSAN--YMSAILCL 333
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASAR 388
K+ ID + F WE C +D+R+++V++ AY++ E+A + + ++
Sbjct: 334 IKVGDIDRAEWIFGSWEVECRKHDVRVSNVLLGAYVRNGWIEKAEKLHLHMLEKGGRPN- 392
Query: 389 FFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA 448
+K+ E M +++SRQ+D A+N M+ ALS K HWRP V+ FFEE+ + D A
Sbjct: 393 -YKTWEILMEGFVQSRQMDKAVNAMKKALSLMKGCHWRPPLRLVEAIATFFEEQGNTDDA 451
Query: 449 EEFCKVLKSLNCLDFSAYSLLIKTYIAA 476
+ KVL+ N Y +++ YI A
Sbjct: 452 NRYIKVLQKFNLTSLPLYKSVLRAYIKA 479
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 220/421 (52%), Gaps = 10/421 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY R+ A+ S++ LN +I EG+TV K L+ VR ++ F R+ HALE+ +WM R
Sbjct: 24 LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83
Query: 106 KMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
+ +F+ T D A+ LDL + +G AE YFN + K YGALL+ Y +E E+A
Sbjct: 84 R-YFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKA 142
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
A +KM E+ F ++ +N L +Y + G K+ L+ +M+ + I D T M +
Sbjct: 143 EATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVA 202
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD 283
Y +DI +E+ M + W YS AS Y+K L +KA LKK+E +P
Sbjct: 203 YVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 262
Query: 284 RK--AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ A+ FL+SLY T + + RVW + K ++ +Y ++ L KL+ I+ ++ F
Sbjct: 263 ERLSAFKFLLSLYARTGHKQELYRVWNLYKPSY-EYPEAYSCMITCLTKLDDIEGAEKIF 321
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYL 401
+EWE C+ YD R+ + ++ AY ++ ++++A + N K + + Y+
Sbjct: 322 QEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVN---KVIEERMPYASTWNILAKGYV 378
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+Q+ A+ ++ A+S ++ WRP + +D + E + +++ EE ++ K+L
Sbjct: 379 EDKQMPKAVEMLKKAISVGRK-GWRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGIP 437
Query: 462 D 462
D
Sbjct: 438 D 438
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 204/384 (53%), Gaps = 10/384 (2%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
L+ VR LRK R+R ALEV EWM + + F D A++LDL + +G+ AAE YFN L
Sbjct: 80 LQRIVRELRKRHRHRQALEVSEWMNLKGHVKFLPKDHAIHLDLIGQVHGVGAAETYFNNL 139
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S+ K YGALLNCY +EL+ ++ALA F+ M EL F+ + +++NNL +Y +GQ E+
Sbjct: 140 SDKDKTEKPYGALLNCYTRELLVDKALAHFQNMKELGFVFSALSYNNLMGLYTNIGQHER 199
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK--CRWTTYSN 255
V ++ +MK+ I DN +Y + + SY D G+E EM ECE + W TY+
Sbjct: 200 VPMVMAEMKRDGIVPDNFSYRICINSYGIRADFFGLENTLEEM--ECEPQIVVDWNTYAV 257
Query: 256 LASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI-LKST 313
+AS Y+K L EKA AL+K E +M +D AY LISLY + + V R+W + + +
Sbjct: 258 VASNYIKGYLREKAYSALRKAEAKMDKKDGDAYGHLISLYGHLGDKLEVKRLWALHMLNC 317
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
N Y +L L KL+ I + +EWES +++D ++ +V++ Y QK + ++A
Sbjct: 318 KRYINKDYTNMLAVLVKLDEITEAEDLLKEWESSKNAFDFQVPNVLLTGYRQKGLLDKAE 377
Query: 374 LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSE-AKQFHWRPMQVTV 432
+ + K+ S I Y + A + ALS A W P +
Sbjct: 378 TLLDGFLKKGKTPTS--TSWWIVAIGYAEKGDVAKAYELTKNALSVFAPNSGWIPRPSII 435
Query: 433 DTFFRFFEEEKDVDGAEEFCKVLK 456
+ ++ E +V E F +LK
Sbjct: 436 EMILKYLGNEGEVKDVEAFVNLLK 459
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 229/446 (51%), Gaps = 13/446 (2%)
Query: 44 DKLYKRLSALGATGGSVTGALNAY-IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
D LY R++A+ +T L + E + V K L+ ++ L + R+ HALE+ WM
Sbjct: 35 DSLYHRVAAVAIPRLQLTPVLEQWAFAEDRPVEKHELQAIIKKLIRLRRFSHALEMSMWM 94
Query: 103 ESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R+ D A L+L +K +G+ +A +YF GLS+ K YG+LL CY + E
Sbjct: 95 TDRRYFPLKPGDVAYRLELISKVHGLKSAVEYFGGLSKEIKKSQCYGSLLKCYAEAKFVE 154
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
A F +M E+ + ++ +N + +Y GQ EKVR + M++ I D T + +
Sbjct: 155 EAEKFFGEMQEMGMM-SSYPYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDILL 213
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MK 280
Y D++G+E V E E+ W +Y+ +AS ++KA L KA AL++ E+ +
Sbjct: 214 TVYKASGDLEGIEEVL-EKAKPRENLVGWHSYAIVASAFMKAGLQGKALQALQESEKRID 272
Query: 281 PRD-RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQ 339
P++ R AY FL+S+ ++ V+R+W + KS P N+ Y+ + AL K+N D ++
Sbjct: 273 PKNGRVAYGFLLSMCADSGMRSEVDRIWDVYKSKVPTCNSMYMCRISALLKMNDTDEAEK 332
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA--KKRANASARFFKSRESFM 397
F EWESR +D RL ++++ Y + + E+A + + A K R + ++K F
Sbjct: 333 AFREWESRFVHHDFRLINLLLNGYCAEGLMEKAEALVDEAITKGRMPYANTWYKLAAGF- 391
Query: 398 IYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKS 457
+ Q+ A++ AL+ A W P V F E+K+V+ AEE +L+S
Sbjct: 392 ---FKDGQVLKAVDLTRKALASATS-GWEPDLTNVLMSLDHFMEQKNVEAAEEMASLLRS 447
Query: 458 LNCLDFSAYSLLIKTYIAAGKLASDM 483
L L Y L+KTY+ AG SD+
Sbjct: 448 LVPLTRDVYHSLLKTYVHAGMPVSDL 473
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 225/446 (50%), Gaps = 13/446 (2%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
D+LY+R+ +G ++ L + EG T +K +++ V+ L R+ HALE+ WM
Sbjct: 40 DELYRRIMNVGRPSIPLSPVLEQWNQEGHTAKKFVIQAIVKKLVGLRRFAHALELSFWMT 99
Query: 104 SRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
R+ +H S D A LDL +K +G+ A +YF + + + YG+LL CY + ++
Sbjct: 100 DRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVDK 159
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A F KM E+ + ++ A+ + +YL+ GQ E+V + M+++ + D + +
Sbjct: 160 AEEHFAKMQEMG-MTSSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAMLA 218
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKP 281
+Y D+ GV +V + N E W +++ AS+++K+ + A +AL + E + P
Sbjct: 219 AYIAAEDVQGVGKVL-DKANPHEKLVTWHGHASAASLFMKSGMQVGAVMALVEAERRISP 277
Query: 282 RD-RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
+ R AY FL+ Y R+W + KS PP NT Y+ L AL + N ID +
Sbjct: 278 KSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPPCNTMYMSRLSALLRTNDIDGAEAT 337
Query: 341 FEEWESRCSSY-DMRLADVIIRAYLQKDMYEEAALIFNNA--KKRANASARFFKSRESFM 397
+EWE+ Y D RL +V++ AY ++ + E+A + + A K R + ++K F
Sbjct: 338 LKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWYKLAGGF- 396
Query: 398 IYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKS 457
++ Q+ A++ AL A WRP V F ++KDV AEE L+
Sbjct: 397 ---FKTGQVPEAVDMTRKALDSATP-PWRPDLANVLMSLNHFVDQKDVGAAEEMVSTLQK 452
Query: 458 LNCLDFSAYSLLIKTYIAAGKLASDM 483
L L Y L+KTY+ AGK SD+
Sbjct: 453 LVPLTRDVYHCLLKTYVRAGKPPSDL 478
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 205/383 (53%), Gaps = 29/383 (7%)
Query: 91 RYRHA-LE--VIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYT 146
R RH LE V EWM ++ + F D AV+LDL + +G +AAE YFN L + K
Sbjct: 93 RLRHVELERIVSEWMNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKP 152
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
YGALLNCY +EL+ E++LA F+KM EL F+ +T+ +NN+ +Y LGQ EKV ++ +MK
Sbjct: 153 YGALLNCYTRELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMK 212
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK--CRWTTYSNLASIYVKAE 264
I DN +Y + + SY D G+E EM ECE K W TY+ +AS Y+K
Sbjct: 213 SNGIVPDNFSYRICINSYGTRADFFGMENTLEEM--ECEPKIVVDWNTYAVVASNYIKGN 270
Query: 265 LFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI-LKSTFPPTNTSYL 322
+ EKA ALKK E ++ +D +Y+ LISLY + + VNR+W + + + N Y
Sbjct: 271 IREKAFSALKKAEAKINIKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYT 330
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
+L L KLN I+ + +EWES +++D ++ +V++ Y QKD+ ++A + ++ K+
Sbjct: 331 TMLAVLVKLNEIEEAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKK 390
Query: 383 ---------ANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVD 433
A +A + + ++ Y L L + A W P ++
Sbjct: 391 GKMPPSTSWAIVAAGYAEKGDAAKAYELTKNALCVY----------APNTGWIPRPGMIE 440
Query: 434 TFFRFFEEEKDVDGAEEFCKVLK 456
++ +E DV+ E F +LK
Sbjct: 441 MILKYLGDEGDVEEVEIFVDLLK 463
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 224/426 (52%), Gaps = 15/426 (3%)
Query: 37 PFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHAL 96
P P+ ED L++R+ G S+ L+ ++ EG+ V++ L+ ++ LRKFGR+ AL
Sbjct: 30 PSPS-TEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFNQAL 88
Query: 97 EVIEWMES-RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYC 155
++ EW+ + R S D AV L L +K G+ AEKYF+ + E +++ YGALL+CY
Sbjct: 89 QLCEWVRNERNQCLSTGDIAVELHLISKARGLEQAEKYFSSIGESSRDHKVYGALLHCYV 148
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
+ ++A A+ +KM E+ F+ +++N + +Y LG+ EK+ L+ +M++ I D
Sbjct: 149 ENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRF 208
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
TY + M +Y+ +DI +E++ +M + W TY + + Y KA L E + L LKK
Sbjct: 209 TYNIRMNAYAAASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKK 268
Query: 276 LEEMKPRDRK--AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNA 333
E+ +K AY +L++LY N D V RVW + + N+ YL ++ +L KL+
Sbjct: 269 AEQFIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLRKRFNSGYLCIISSLMKLDD 328
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR 393
ID ++ +EWES +S+D R+ +++I +Y K ++A N + K
Sbjct: 329 IDGAERILKEWESGDTSFDFRIPNMMINSYCMKGFVDKAEAYINRLIETG-------KEP 381
Query: 394 ESFMIYYLRSRQLDLAL-NEMEAALSEAKQF---HWRPMQVTVDTFFRFFEEEKDVDGAE 449
E+ L S L N++ L +A HW+P + + + ++VD AE
Sbjct: 382 EANTWDLLASGYHSNGLTNKVAETLKKAISVSPPHWKPKYHILAACLEYLKTNENVDLAE 441
Query: 450 EFCKVL 455
E +L
Sbjct: 442 EIIGLL 447
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/438 (31%), Positives = 227/438 (51%), Gaps = 13/438 (2%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
D L KRL L S L + EG+TV K L VR LRK+GR++HALE+ EWM
Sbjct: 30 DTLGKRLLKLIYPKRSAVVVLRRWAEEGRTVEKYQLNRVVRELRKYGRFKHALEICEWMR 89
Query: 104 SR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
+R +M D AV+LDL AK G+A+A K+F + E AK T ALL+ Y + E+
Sbjct: 90 TRPEMRLLPGDHAVHLDLVAKVRGLASAVKFFEDMPERAKAPSTCNALLHAYVQHGAREK 149
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A A+ +M +L + FN++ ++Y+ G+ E+V ++ ++++ + D +TY +W+
Sbjct: 150 AEAMMAEMARAGYLTCALPFNHMMSLYMASGELERVPEMIKELRRYTVP-DLVTYNMWLT 208
Query: 223 SYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
S + E+VF M ++ D W T+S L SIY+ A L + AL ++E+M
Sbjct: 209 YCSKKKSVKSAEKVFALMKDDRVVPD---WMTFSLLGSIYINAGLHVEGRNALVEMEKMA 265
Query: 281 PR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILK 338
R +R AY L++LY + S+ ++RVW ++ TF ++T Y +L +L + N I +
Sbjct: 266 SRKERAAYSSLLTLYASLSDRGNLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAAE 325
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMI 398
+ EWES + D R+ + I+ Y++ M E+A ++ + + + E F+
Sbjct: 326 GLYREWESASGTRDSRIPNTILSYYIKNGMIEKAESFLGQIVEKGVKPS--YSTWELFIW 383
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
YL + D L ++ ALS ++ W P F E+ D++ AE+ V +
Sbjct: 384 GYLGDNKTDKVLECLKKALSSLEK--WEPNHELATAIFSQVEKTGDIEAAEKLLVVFRDA 441
Query: 459 NCLDFSAYSLLIKTYIAA 476
+ Y+ +++TY A
Sbjct: 442 GYVTTEMYNSVLRTYAEA 459
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 213/426 (50%), Gaps = 13/426 (3%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDM-LEYCVRSLRKFGRYRHALE 97
P L L LG G + + + + +D+ L V+ LR R+R ALE
Sbjct: 45 PPARPPTLGSTLWPLGNPGTLLVPEIELWAARPENHLRDVDLRRIVKELRTRRRHRQALE 104
Query: 98 VIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
V EWM + + F D AV+LDL +G+ AAE YFN LS+ K YGALLNCY +
Sbjct: 105 VSEWMNLKGHVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLNCYTR 164
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E + ++ALA F+KM EL F+ + +NNL ++Y + Q E+V ++ +MK I DN +
Sbjct: 165 ERLVDKALAHFQKMKELGFVFTALPYNNLMSLYTNIEQHERVPSVMAEMKSNGIVPDNFS 224
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDK--CRWTTYSNLASIYVKAELFEKAELALK 274
Y + + SY D G+E EM ECE + W TY+ +AS Y+K +L EKA ALK
Sbjct: 225 YRICINSYGTRADFFGLENTLEEM--ECEPQIVVDWNTYTVVASQYIKGDLREKAYSALK 282
Query: 275 KLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLN 332
K E +M +D AY LISLY + + V R+W + S NT Y +L L KL+
Sbjct: 283 KAEAKMGIKDLAAYRHLISLYGHLGDKSEVKRLWAVQMSNCQRHLNTDYTNILAVLVKLD 342
Query: 333 AIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN--AKKRANASARFF 390
I + +EWE+ + +D ++ +V++ Y QK + ++A + + K + S +
Sbjct: 343 EIAEAEDLLKEWETSKNEFDFKVPNVLLTWYCQKGLLDKAEALLDGFLIKGKMPPSTSWE 402
Query: 391 KSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE 450
+ +R +L N A A W P ++ ++ +E++V E
Sbjct: 403 IVASGYTEKGDVARAYELTKN---ALYMYAPNSGWVPEPSMIEMILKYLGDEREVKDVEA 459
Query: 451 FCKVLK 456
F +LK
Sbjct: 460 FIDLLK 465
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 232/436 (53%), Gaps = 10/436 (2%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
D L KRL L S L + EG+TV+K L VR LRK+GR++HALE+ EWM
Sbjct: 31 DTLGKRLLKLIYPKRSAVVVLQRWADEGRTVQKYQLNRVVRELRKYGRFKHALEICEWMR 90
Query: 104 SR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
++ +M D AV+LDL AK G+A+A K+F + E AK T ALL+ Y + E+
Sbjct: 91 TQPEMRLLPGDHAVHLDLVAKVRGLASATKFFEDMPERAKGPSTCNALLHAYVQNGAREK 150
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A A+ +M + +L + FN++ ++Y+ G+ E+V ++ ++++ + D +TY +W+
Sbjct: 151 AEAMLAEMARVGYLTCALPFNHMMSLYMATGELERVPEMIKELRRYTLP-DLVTYNIWLT 209
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR 282
S + + E+VF M ++C W T+S L SIY+ A L + AL ++E+ R
Sbjct: 210 YCSKKDSVKSAEKVFGLMKDDCVVP-DWMTFSLLGSIYINAGLHVEGRNALVEMEKRASR 268
Query: 283 -DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQC 340
+R AY L++LY + S+ ++RVW ++ TF ++T Y +L +L + + I +
Sbjct: 269 KERAAYSSLLTLYASLSDRGNLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAAESI 328
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY 400
F EWES + D R+ + I+ Y++ M ++A ++ ++ + + + E+F+ Y
Sbjct: 329 FSEWESTSGTRDSRIPNTILSYYIKNGMIKKAESFLDHIVEKGVKPS--YSTWEAFVWGY 386
Query: 401 LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC 460
L + D L M+ ALS ++ W P F E+ D++ AE+ + +
Sbjct: 387 LGDKT-DKVLECMKKALSCLEK--WEPNHELATAIFSQIEKTGDIEAAEKLLVIFRDAEY 443
Query: 461 LDFSAYSLLIKTYIAA 476
+ Y+ +++TY A
Sbjct: 444 VTTEMYNSVLRTYAEA 459
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 230/439 (52%), Gaps = 14/439 (3%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
D L KRL L S L + EG+TV+K L VR LRK+ R++HALE+ EWM
Sbjct: 30 DTLGKRLLKLMYPKRSAVVVLRRWTEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 89
Query: 104 SR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
++ +M D AV+LDL AK G+A+AEK+F + E AK T ALL+ Y + + ++
Sbjct: 90 TQPEMKLLPGDHAVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNALLHAYVQNGVRDK 149
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A A+ +M + +L + FN++ +MY+ G+ EKV ++ ++++ I D +TY +W+
Sbjct: 150 AEAMLREMADAGYLTCALPFNHMMSMYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLT 208
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
S N + E+VF M + DK W T+S +ASIY+ A L K AL ++E+
Sbjct: 209 YCSRKNSVKTAEKVFDLMKD---DKVFPDWMTFSLMASIYINAGLHVKGRDALVEMEKRA 265
Query: 281 PR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILK 338
R +R AY L++LY + S+ ++RVW ++ F ++T Y +L +L + I +
Sbjct: 266 SRKERTAYSSLLTLYASLSDRGNLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAAE 325
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMI 398
+ EWES + D R+ + I+ +++ E A + ++ + + + E F+
Sbjct: 326 SVYSEWESESGTRDSRIPNTILSFHIKNGKMEMAESFLQHIMQKGVKPS--YSTWELFVW 383
Query: 399 YYL-RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKS 457
YL ++D L ++ ALS + W P V F E+ D++ AEE VL+
Sbjct: 384 GYLGNDERIDKILECLKKALSSLDK--WEPNPQLVAALFSLIEKRGDIEAAEELLVVLRG 441
Query: 458 LNCLDFSAYSLLIKTYIAA 476
+ Y+ +++TY A
Sbjct: 442 AGYVTTEIYNSVLRTYSKA 460
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 224/432 (51%), Gaps = 9/432 (2%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSYTDFAVY 117
SVT L I G V L + L + RY AL+++EWME++K + FS D A+
Sbjct: 53 SVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALR 112
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKN----RYTYGALLNCYCKELMTERALALFEKMDEL 173
LDL KT+G+ E+YF L + + + Y LL Y K M + A AL EK++ L
Sbjct: 113 LDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGL 172
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
FL FN + +Y GQ EKV +V+ MK I + L+Y +WM + ++ + V
Sbjct: 173 GFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAV 232
Query: 234 ERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLIS 292
E V+ EM + + W++ LA++Y+K+ EKA L L+ E+M R +R Y FLI+
Sbjct: 233 ETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLIT 292
Query: 293 LYCNTSNLDAVNRVWGILKSTFPPTN-TSYLVLLQALAKLNAIDILKQCFEEWESRCSSY 351
LY + N + V R+W + KS + +Y+ +L +L K ++ ++ F EWE++C +Y
Sbjct: 293 LYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNY 352
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALN 411
D+R+++V++ AY++ +A + +R +K+ E M +++ ++ A++
Sbjct: 353 DVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPN--YKTWEILMEGWVKCENMEKAID 410
Query: 412 EMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIK 471
M ++ HWRP V +FE+E+ ++ A + + L L Y LL++
Sbjct: 411 AMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLR 470
Query: 472 TYIAAGKLASDM 483
+ A + A D+
Sbjct: 471 MHEHAKRPAYDI 482
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 240/473 (50%), Gaps = 13/473 (2%)
Query: 8 RLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAY 67
RL + Y S P + A G D L KRL L S L +
Sbjct: 5 RLAAATGYARLLSASAPAASTG---GAGGSISVGGGDTLGKRLLKLIYPKRSAVVVLRRW 61
Query: 68 IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVYLDLTAKTNG 126
EG+ V K L VR LRK+ R++HALE+ EWM ++ ++ D AV+LDL AK G
Sbjct: 62 AEEGRAVHKYQLNRVVRELRKYRRFKHALEICEWMRTQPEIRLLPGDHAVHLDLVAKVRG 121
Query: 127 IAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
+A+AEK+F + E AK T +LL+ Y + ++A A+ ++M + +L + FN++
Sbjct: 122 LASAEKFFEDVPERAKGPSTCNSLLHAYVQHGARDKAEAMLKEMADAGYLTCALPFNHMM 181
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
++Y+ +G+ EKV ++ ++++ I D +TY +W+ S N + E+VF ++ +
Sbjct: 182 SLYMSVGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSRKNSVKSAEKVF-DLMKDDRV 239
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNR 305
W T+S LASIY+ A L K AL ++E+ R +R AY L+++Y + S+ ++R
Sbjct: 240 VPDWMTFSLLASIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTMYASLSDRGNLDR 299
Query: 306 VWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL 364
VW ++ TF ++ Y +L +L + I + + EWES+ + D R+ + I+ Y+
Sbjct: 300 VWSKMRQTFRKFSDAEYKCMLTSLTRFGDIAAAEFVYGEWESQSGTKDSRIPNTILSFYI 359
Query: 365 QKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYL-RSRQLDLALNEMEAALSEAKQF 423
+ E+A ++ + + + E F+ YL + D + ++ ALS ++
Sbjct: 360 KNGEMEKAESFLQYIVQKGVKPS--YSTWELFVWGYLGNDERTDKVMECLKKALSSLEK- 416
Query: 424 HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAA 476
W P V F E++ D++ AEE VL+ + Y+L+++TY A
Sbjct: 417 -WEPNPQLVAALFSQIEKKGDIEAAEELLVVLRGAGYVTTEIYNLVLRTYAKA 468
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 209/387 (54%), Gaps = 15/387 (3%)
Query: 97 EVIEWMESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCY 154
+V EWM +R F S +D A+ LDL AK G+++AE YF+ L + K++ YGALLN Y
Sbjct: 320 KVYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAY 379
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
+ M ++A L EK+ + + FN + T+Y+ L + +KV+ ++++M +NI LD
Sbjct: 380 VQAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDI 439
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
+Y +W+ S + +E+VF +M E WTT+S +A++Y+K FEKAE LK
Sbjct: 440 YSYNIWLSS---CESTERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLK 496
Query: 275 KLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLN 332
K+E + RDR YH+LISLY +T N V R W I KS FP N Y L+ +L ++
Sbjct: 497 KVESRITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVG 556
Query: 333 AIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN---AKKRANASARF 389
++ ++ +EEW S SSYD R+ ++++ Y+++ E+A ++ A + N++
Sbjct: 557 DLEGAEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWE 616
Query: 390 FKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAE 449
+ + + +++ AL+ + A+ W+P V V F EEE D E
Sbjct: 617 ILAEGNTGV-----KKISDALSCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKE 671
Query: 450 EFCKVLKSLNCLDFSAYSLLIKTYIAA 476
+L+ + CL+ Y+ L + +
Sbjct: 672 ALMGLLRQMGCLEDEPYASLFGLHTGS 698
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 231/436 (52%), Gaps = 9/436 (2%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
D L +RL L S L + EG+TV+K L VR LRK+ R++HALE+ EWM
Sbjct: 43 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 102
Query: 104 SR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
++ +M D AV+LDL AK G+ +AEK+F + E AK T ALL+ Y + ++
Sbjct: 103 TQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDK 162
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A A+ E+M + +L + FN++ ++Y+ G+ EKV ++ ++++ I D +TY +W+
Sbjct: 163 AEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLT 221
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR 282
S N + E+V Y++ + W T+S L SIY+ A L K AL ++E+ R
Sbjct: 222 YCSKKNSVKAAEKV-YDLMKDERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASR 280
Query: 283 -DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQC 340
+R AY L++LY + S+ ++RVW ++ TF ++T Y +L +L + I +
Sbjct: 281 KERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESF 340
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY 400
+ EWES + D R+ + I+ Y++ M E+A ++ ++ + + + E F+ Y
Sbjct: 341 YSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPS--YSTWELFVWGY 398
Query: 401 LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC 460
L ++D L ++ ALS ++ W P + EE+ D++ AE+ + +
Sbjct: 399 LSDGRMDKVLECLKKALSCLEK--WDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGY 456
Query: 461 LDFSAYSLLIKTYIAA 476
+ Y+ +++TY A
Sbjct: 457 VTTEIYNSVLRTYAKA 472
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 215/425 (50%), Gaps = 11/425 (2%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES-RKMHFSYTDFAV 116
G+ A++ + E + + L + LR+ RY HALE+ WMES + S D A
Sbjct: 70 GAAAAAIDRWARESVHISQPELRRAIAMLRRARRYEHALEIFSWMESCNSVLLSSWDHAA 129
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
LDL AK G + AE+Y+N L A + LL+CY E ++A ++
Sbjct: 130 RLDLIAKAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNVQKAETFMAQLQSCGLP 189
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
+ +FN + +Y+ Q EK +++ MK+ NI + L+Y +WM + ++ + V+ V
Sbjct: 190 VDPHSFNEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLWMNVCAEVSGVAPVQSV 249
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYC 295
F EM N+ + W+TY LA+I+ K L KA+ L+K E ++ P R Y F+++ Y
Sbjct: 250 FQEMLNDETVEVGWSTYCTLANIFRKNGLNTKAQACLRKAETKLSPTGRLGYSFVMTCYA 309
Query: 296 NTSNLDAVNRVWGILKST---FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
++ D V R+W KS P N Y+ + K+ I + F WE+ C +D
Sbjct: 310 ALNDSDGVMRLWEASKSVPGRIPAAN--YMTAMLCSIKVGDISQAEWIFGSWEAGCRKHD 367
Query: 353 MRLADVIIRAYLQKDMYEEAA-LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALN 411
+R+++V++ AY++ E+A L + +K A + +K+ E M Y++SRQ+D A+
Sbjct: 368 VRVSNVLLGAYVRNRWIEKAERLHLHMLEKGARPN---YKTWEILMEGYVQSRQMDKAVG 424
Query: 412 EMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIK 471
M+ LS K HWRP ++ + FEE+ D A + KVL+ N Y LI+
Sbjct: 425 CMKKGLSLLKSCHWRPPLELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLIR 484
Query: 472 TYIAA 476
YI A
Sbjct: 485 AYINA 489
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 225/411 (54%), Gaps = 10/411 (2%)
Query: 49 RLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKM 107
R+S G S+ + ++ EG ++++ L+ ++ R+ R+ HAL++ +WM + R
Sbjct: 9 RISRAGNPKVSIIPVIEQWLKEGNSIKQSDLQNFIKLFRRHRRFSHALQISQWMSDERGS 68
Query: 108 HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALF 167
S DFAV LDL +K +G+ AE+Y+N + ++ + YGALLNCY + E+A A
Sbjct: 69 EQSPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEATM 128
Query: 168 EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHL 227
+KM EL + T+++N + ++Y +G+ EK+ LV +M+++ ++ D T+ + + +Y
Sbjct: 129 QKMRELGLV-QTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVAT 187
Query: 228 NDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-----PR 282
++I+ +E++ +M + + T+ +A+ Y+KA L EK+ + LK+ EE+
Sbjct: 188 SNIEEMEKLLMKMETDSLINIDFHTFFAVANGYLKAGLLEKSIVMLKRAEELTVPMVGTT 247
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
AY L++LY + N D V RVW K+T N++Y+ ++ +L +L ID + E
Sbjct: 248 KAHAYEMLLTLYGSAGNKDGVYRVWNSYKNTGRIFNSTYICMINSLMRLGDIDGAEWISE 307
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLR 402
EW SR + YD+R+ + +IRAY +K ++++A N K + S + Y
Sbjct: 308 EWVSRKTLYDIRIPNTMIRAYSRKGLWKKAEEYVN--KIVESGMQLEASSWDHLATGYHF 365
Query: 403 SRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCK 453
Q+ A+ ++ A+S +K W+P T+ T + E + D + AEE K
Sbjct: 366 GGQMAKAVETLKKAISISKP-GWKPNPYTLKTCLWYLESKGDEEAAEELLK 415
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 229/457 (50%), Gaps = 16/457 (3%)
Query: 39 PTGNEDK--------LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFG 90
PTG K LY R+S+L +++ LN +++EG+ V K+ L ++ LR
Sbjct: 46 PTGRTKKPWTDAMNVLYNRISSLADQRITISLFLNHWVLEGQPVNKNQLREFIKELRFHK 105
Query: 91 RYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGA 149
RY HALE+ WM +S + D AV LDL +K +GI A+K FN ++ K Y A
Sbjct: 106 RYAHALEISTWMTDSGYFELASQDVAVQLDLISKVHGIEQAQKLFNNTPQHLKVLKVYSA 165
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
LLNCY K + E+A ++ ++M L F + +N + Y + G P+K+ L+ +M+Q
Sbjct: 166 LLNCYAKAKLVEKAESVVQEMKSLGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNG 225
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
I D + + + +Y+ ++DI G+E+ +M ++ WT+Y+ A Y+K L +KA
Sbjct: 226 IGCDKFAHSIQLSAYASVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDKA 285
Query: 270 ELALKKLEEMKPRDRK--AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQA 327
L+K E + R+ AY LI+LY T + V R+W + K +Y+ ++ +
Sbjct: 286 LEMLEKSERLVTGKRRGTAYDSLITLYAATGKTNEVLRIWELYKKNEKVYKEAYISIITS 345
Query: 328 LAKLNAIDILKQCFEEWE-SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANAS 386
L KL+ + ++ FEEWE S YD+ + + +I AY +K + E+A + + A +
Sbjct: 346 LLKLDDFENAEKIFEEWEFQNHSCYDIHIPNFLIDAYSRKGLVEKAETLIDRAISKGGEP 405
Query: 387 ARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVD 446
K+ YL++ Q A+ M+ A+ + + W+P + + + E D+
Sbjct: 406 NA--KTWYHLATGYLQNGQTLKAVEAMKKAVVVSGRM-WKPSNEILANCLGYLKVEGDLG 462
Query: 447 GAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
F +L+ + + L+ +I K +SD+
Sbjct: 463 KLTNFMDLLRDNDIISLDIQERLL-NHIKNAKSSSDV 498
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 207/382 (54%), Gaps = 5/382 (1%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
T D L R+ L S T L +I +G V L R L K R++HALE++
Sbjct: 34 TCKRDDLTSRMLKLVFPRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEIL 93
Query: 100 EWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL 158
WME++ + S D A+ L+L K +A AE+YF L + + LL+ Y KE
Sbjct: 94 AWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKER 153
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
E+A AL K+++L + FN + +Y+ Q E+V ++ QMKQ I L+ L+Y
Sbjct: 154 AIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYN 213
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE- 277
+WM + S ++ + E V+ +M ++ + W+T S LA+IY+K+ L +KA LALK E
Sbjct: 214 LWMSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEK 273
Query: 278 EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDI 336
++ +R Y FLI++Y + SN + V R+W K T+T+Y+ +L L KL I
Sbjct: 274 KLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAE 333
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESF 396
++ F EWES+C YD+R+++V++ AY++ ++A + + +R +K+ E
Sbjct: 334 AERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPN--YKTWEIL 391
Query: 397 MIYYLRSRQLDLALNEMEAALS 418
M +++S+ +D A+N M+ S
Sbjct: 392 MEGWMKSQNMDKAINAMKKGFS 413
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 193/361 (53%), Gaps = 25/361 (6%)
Query: 109 FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFE 168
F D AV+LDL + +G +AAE YFN L + K YGALLNCY +EL+ E++LA F+
Sbjct: 9 FLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQ 68
Query: 169 KMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN 228
KM EL F+ +T+ +NN+ +Y LGQ EKV ++ +MK I DN +Y + + SY
Sbjct: 69 KMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRA 128
Query: 229 DIDGVERVFYEMCNECEDK--CRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRK 285
D G+E EM ECE K W TY+ +AS Y+K + EKA ALKK E ++ +D
Sbjct: 129 DFFGMENTLEEM--ECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEAKINIKDSD 186
Query: 286 AYHFLISLYCNTSNLDAVNRVWGI-LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
+Y+ LISLY + + VNR+W + + + N Y +L L KLN I+ + +EW
Sbjct: 187 SYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEW 246
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR---------ANASARFFKSRES 395
ES +++D ++ +V++ Y QKD+ ++A + ++ K+ A +A + + ++
Sbjct: 247 ESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAEKGDA 306
Query: 396 FMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL 455
Y L L + A W P ++ ++ +E DV+ E F +L
Sbjct: 307 AKAYELTKNALCVY----------APNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDLL 356
Query: 456 K 456
K
Sbjct: 357 K 357
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 191/366 (52%), Gaps = 11/366 (3%)
Query: 104 SRKMHFSY--TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
S K H + D A++LDL + +G+ AAE YFN LS+ K YGALLNCY +EL+ +
Sbjct: 2 SLKGHVKFLPKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVD 61
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+ALA F M EL F+ +T+ +N+L +Y R+GQ E+V ++ +MK I DN +Y + +
Sbjct: 62 KALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICI 121
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDK--CRWTTYSNLASIYVKAELFEKAELALKKLE-E 278
SY D G+E EM ECE + W TY+ +AS Y+K +L EKA AL K E +
Sbjct: 122 NSYGTRADFFGLENTLEEM--ECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEAK 179
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDIL 337
+ +D AY LISLY N + R+W + S N Y+ +L L KL+ I
Sbjct: 180 LDKQDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEA 239
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFM 397
+ +EWES +S+D R+ +V++ Y QK + ++A ++ + K+ S
Sbjct: 240 EDLLKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPS--TSWGIVA 297
Query: 398 IYYLRSRQLDLALNEMEAALS-EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
I Y + A + ALS A W P ++ ++ +E +V E F +LK
Sbjct: 298 IGYAEKGDVAKAYEMTKNALSVHAPNTGWIPRPSMLEMILKYLGDEGEVKDVEAFVSLLK 357
Query: 457 SLNCLD 462
+ +D
Sbjct: 358 AAVPVD 363
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 214/417 (51%), Gaps = 7/417 (1%)
Query: 49 RLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KM 107
R+ L SV L+ ++ EG TVRK +L V ++ F R+ HAL++ +WM R +
Sbjct: 13 RIVNLKDPKASVIPVLDQWVNEGNTVRKALLRSLVNLMKGFNRFNHALQISQWMADRPNL 72
Query: 108 HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALF 167
S +D V L+L + G A AEKYF L + K R Y ALL+ Y +E +A A+
Sbjct: 73 TLSPSDVVVRLELVHRIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQESSVRKAEAIM 132
Query: 168 EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHL 227
E+M + +N L +Y + G EK+ L+ +M+ + T M +Y
Sbjct: 133 EEMRAKGMANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLMAAYVAA 192
Query: 228 NDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK-- 285
++I G+ER+ ++ + + W YS AS Y+K L EKA L+KLE++ P ++K
Sbjct: 193 SNISGMERILNQIEKDPQLGNDWRVYSVAASGYLKFGLIEKALTMLRKLEDVMPLEKKTS 252
Query: 286 AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
A+ L++LY T D + VW K TS + ++ +L+KL+ I ++ F EWE
Sbjct: 253 AFDILVTLYGKTGKRDELYLVWNTYKPLIELKETSVMTMISSLSKLDDIKGAEKIFREWE 312
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQ 405
S+C YD R+ + ++ AY +K + ++A A K A S + Y+ Q
Sbjct: 313 SQCMMYDFRVLNTLLFAYCRKGLLKKAEAAVEKAAKDRTPCA---SSWGILAMGYIEHNQ 369
Query: 406 LDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD 462
+ A+ ++ ALS + Q WRP +T+ F E++ DV+G EE K+LKSL L+
Sbjct: 370 MYKAVEMLKKALSISGQ-GWRPNSMTLTACLNFLEKQGDVEGVEEVTKLLKSLEPLN 425
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 213/423 (50%), Gaps = 5/423 (1%)
Query: 57 GGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES-RKMHFSYTDFA 115
G+ A+ + + V + L + LR+ RY ALE+ WMES + S D A
Sbjct: 67 AGTAAAAVERWAQDRVHVSQPELRRAIGMLRRERRYEQALEIFSWMESCSSLRLSSWDHA 126
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
LDL AK + AE+Y+N L A + LL+CY E ++A ++
Sbjct: 127 ARLDLIAKAYSTSQAEEYYNKLQSPATRQAASFPLLHCYVMERDVQKAETFMAQLQSHGL 186
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ +FN + +Y+ Q EKV +++ MK+ NI + L+Y +WM + + ++ +D V+
Sbjct: 187 PVDPHSFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQS 246
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLY 294
VF M N+ K W+TY LA+I+ K L +A+ L K E ++ P R Y F+++ Y
Sbjct: 247 VFQVMLNDETVKVGWSTYCTLANIFRKNGLNNEAQACLVKAEAKLSPAGRLGYSFVMTCY 306
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
++ D V R+W KS T+ Y+ + K+ I + F +WE+ C +D+
Sbjct: 307 AALNDSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKHDV 366
Query: 354 RLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEM 413
R+++V++ AY++ E+A + + ++ + +K+ E M Y++SRQ+D A+ M
Sbjct: 367 RVSNVLLGAYVRNRWIEKAERLHLHMLEK--GACPNYKTWEILMEGYVQSRQMDKAVGCM 424
Query: 414 EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTY 473
+ LS K HWRP ++ + FEE+ D A + KVL+ N Y LI+ Y
Sbjct: 425 KKGLSLLKSCHWRPPVELMEAIGKHFEEQGSADDAYRYIKVLQRFNLTSLPLYKSLIRAY 484
Query: 474 IAA 476
I A
Sbjct: 485 INA 487
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 214/432 (49%), Gaps = 25/432 (5%)
Query: 39 PTGNEDKLYKRLSALGATGGSVTGALNAYIM-EGKTVRKDMLEYCVRSLRKFGRYRHALE 97
P L+ L LG G + + + GK +R L + V+ LR+ R+R ALE
Sbjct: 45 PPARPPTLWSTLCPLGKPGTLLVPEIELWAARSGKRLRPCELHFVVKDLRRRHRHRQALE 104
Query: 98 VIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
V EWM + + F D AV+LDL +G+ AAE YFN LS+ K YGALL CY +
Sbjct: 105 VSEWMNLKGHVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLYCYTR 164
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E + ++ALA F+KM EL F+ + ++NL +Y + Q E+V ++ +MK I +N +
Sbjct: 165 ECLVDKALAHFQKMKELGFVFTPLPYSNLMILYANVEQHERVPSVMAEMKSNGIVPNNFS 224
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y + + +Y D G+E EM + W TY+++AS Y+K +L EKA AL+K
Sbjct: 225 YNICINAYGTRADFSGLENTLEEMEFASQVVVDWRTYADVASHYIKGDLREKAYSALQKA 284
Query: 277 E-EMKPRDRKAYHFLISLYCNTSNLDAVNRVW--GILKSTFPPTNTSYLVLLQALAKLNA 333
E +M +D AY LISLY + + + R+W +LK N Y +L L KL+
Sbjct: 285 EAKMDEKDSFAYSHLISLYGHLGDKSEIKRLWVLQMLKCKG-CINKGYKYMLTVLVKLDE 343
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN---------NAKKRAN 384
I + ++WES + +D ++ +++++ Y Q + ++A + + +A A
Sbjct: 344 IAEAEDLLKKWESSKNEFDFKVPNILLKGYCQWGLLDKAEALLDGFLRKGKKPSATSWAI 403
Query: 385 ASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKD 444
++ + + + Y L R L + + + W P ++ ++ +E +
Sbjct: 404 VASAYAEKGDVPRAYELTKRALSMCVPDS----------GWIPEPSMIEVILKYLGDEGE 453
Query: 445 VDGAEEFCKVLK 456
V E F +LK
Sbjct: 454 VKDVEAFIDLLK 465
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 241/483 (49%), Gaps = 31/483 (6%)
Query: 1 MMIRNQSRLISTGSYLVRQLC-STPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGS 59
+ +R+ L ++R LC ST T +S L +R+S +
Sbjct: 3 LFVRSNPSLCLHIDGVLRALCFSTDTTAISH--------------SLNRRISMVEDPMVP 48
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMH-FSYTDFAVYL 118
V + ++ EG+ V L++ +R LRK R+ HAL++ +WM ++ H S D AV L
Sbjct: 49 VIPVIEKWVQEGQVVTNSDLKHFIRKLRKIHRFSHALQISQWMSDQRGHNLSPGDVAVRL 108
Query: 119 DLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
DL +K +G+ A YFN + E + YGALLNCY E A A KM E+ F+ N
Sbjct: 109 DLISKVHGLEQAVTYFNSVPESLRGLEVYGALLNCYAHYKHLEEAEATMRKMREMGFVRN 168
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFY 238
+++N + +Y ++G+ EK++ L+ +M++ I N+TY + + +Y ++I+ ++++
Sbjct: 169 VLSYNVMLNLYYQMGKYEKIQVLMQEMEKWGICFSNITYKILLNAYVATSNIEEIKKILM 228
Query: 239 EMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCN 296
+M + W Y A+ Y+KA L +K L + E++ R A L+SLY
Sbjct: 229 KMEADPLVSIDWYAYVVAANGYLKAGLIDKTLTMLWRSEQLISGKSARFACETLLSLYTA 288
Query: 297 TSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
N + V RVW + K+ N+SYL ++ +L KL+ +D ++ +EEW S +D+R+
Sbjct: 289 VGNKEQVYRVWNLYKTKGRSLNSSYLCMINSLLKLDDVDGAERIWEEWVSIVKFFDIRIP 348
Query: 357 DVIIRAYLQKDMYEEA-----ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALN 411
+V++ AY +K ++E+A ++ + K A+ R Y++R + L A
Sbjct: 349 NVMVSAYSKKGLWEKAEAFVGKIVASGIKIEASTLDRLATG------YHVRGQMLK-ASE 401
Query: 412 EMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIK 471
++ A+S Q W+P T+ + + +DV E+ K+LK L +Y L
Sbjct: 402 TIKKAIS-ISQPGWKPNVYTLAACLEYLKGREDVKKIEDPLKILKEHCHLSSVSYDRLNS 460
Query: 472 TYI 474
+ I
Sbjct: 461 SII 463
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 231/450 (51%), Gaps = 16/450 (3%)
Query: 42 NEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW 101
ED L++R++ ++ E V K L+ V+ LR+ R+ ALE+ W
Sbjct: 48 GEDSLFRRVAGADPRIPLAPVLEQWWLAEEHPVSKPELQSLVKYLRRRRRFSQALELSMW 107
Query: 102 M-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMT 160
M E R +H S D A L+L +K +G+ A +YF+ + + YG+LL CY +
Sbjct: 108 MTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAERV 167
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
E+A LFE M + + N+ A+N + +Y ++GQ E+V + M++ I D T
Sbjct: 168 EKAEELFENMRGMG-MANSYAYNAMMNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDNL 226
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-- 278
+ +Y+ + D++ +E+V + C + W +++ + +++KA + E+A A ++ E+
Sbjct: 227 VSAYADVEDVEAIEKVLEKAS--CNNLMSWHSFAIVGKVFMKAGMQERALQAFQESEKRI 284
Query: 279 -MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT--NTSYLVLLQALAKLNAID 335
+ R AY FL+++Y + V+R+W + +S P + NT Y+ + L K+N I
Sbjct: 285 TARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIV 344
Query: 336 ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN--AKKRANASARFFKSR 393
++ +EEWES+ +D RL ++++ AY ++ + E+A + + K R S ++K
Sbjct: 345 GAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTPFSNTWYKLA 404
Query: 394 ESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCK 453
+ S+ DL + +A +E W+P V +F E+K+V+ AEE
Sbjct: 405 GGYFKVGQASKAADLTKKALASASNE-----WKPDLANVLMSINYFAEQKNVEAAEEMAS 459
Query: 454 VLKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
+L+ L L Y L+KTY+ AG+ ASD+
Sbjct: 460 LLQRLVPLTRDVYHGLLKTYVNAGEPASDL 489
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 223/427 (52%), Gaps = 17/427 (3%)
Query: 37 PFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHAL 96
P P+ ED L++R+ G S+ L+ ++ EG+ V + L+ ++ LR FGR+ HAL
Sbjct: 30 PSPS-TEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNHAL 88
Query: 97 EVIEWMES-RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYC 155
++ EW + R S A+ L L +K G+ AE+YF+ + E +++ YGALL+CY
Sbjct: 89 QLCEWERNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYV 148
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
+ ++A A+ +KM E+ F+ +++N + +Y +LG+ EK+ LV +M++ I +
Sbjct: 149 ENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRF 208
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
TY V M +Y+ +DI +E++ +M + W Y + + Y KA L E + LKK
Sbjct: 209 TYNVRMNAYAAASDITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAGLSENSISMLKK 268
Query: 276 LEEMKPRDRK--AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNA 333
E++ +K AY +L++LY N D V RVW + + N+ YL ++ +L KL+
Sbjct: 269 AEQLIGDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRFNSGYLCIISSLMKLDD 328
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA-----LIFNNAKKRANASAR 388
ID ++ +EWES +S+D ++ +++I +Y K ++A LI N + RA A R
Sbjct: 329 IDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDR 388
Query: 389 FFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA 448
Y + + A ++ A+S + W+P + + + +V+ A
Sbjct: 389 LASG-------YHSNGLTNKAAETLKKAISVSPP-RWKPNYDILAACLEYLKTNGNVELA 440
Query: 449 EEFCKVL 455
EE +L
Sbjct: 441 EEIIGLL 447
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 231/448 (51%), Gaps = 12/448 (2%)
Query: 42 NEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW 101
ED L++R++ ++ E + V K L+ V+ LR+ R+ ALE+ W
Sbjct: 48 GEDSLFRRVAGADPRIPLAPVLEQWWLAEERPVSKPELQSLVKYLRRRCRFSQALELSMW 107
Query: 102 M-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMT 160
M E R +H S D A L+L +K +G+ A +YF+ + + YG+LL CY +
Sbjct: 108 MTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERV 167
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
E+A LFE M + + N+ A+N + +Y ++GQ E+V + M++ I D T
Sbjct: 168 EKAEELFENMRGMG-MANSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNL 226
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-- 278
+ +Y+ + D++ +E+V + C + W +++ + +++KA + E+A A ++ E+
Sbjct: 227 VSAYADVEDVEAIEKVLEKAS--CNNLMSWHSFAIVGKVFMKAGMQERALQAFQESEKRI 284
Query: 279 -MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT--NTSYLVLLQALAKLNAID 335
+ R AY FL+++Y + V+R+W + +S P + NT Y+ + L K+N I
Sbjct: 285 TARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIV 344
Query: 336 ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRES 395
++ +EEWES+ +D RL ++++ AY ++ + E+A + + K+ F +
Sbjct: 345 GAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGR--TLFSNTWYK 402
Query: 396 FMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL 455
Y + Q+ A + + AL+ A W+P V +F E+K+V+ AEE +L
Sbjct: 403 LAGGYFKVGQVSKAADLTKKALASASN-EWKPDLANVLMSINYFAEQKNVEAAEEMASLL 461
Query: 456 KSLNCLDFSAYSLLIKTYIAAGKLASDM 483
+ L L Y L+KTY+ AG+ ASD+
Sbjct: 462 QRLVPLTRDVYHGLLKTYVNAGEPASDL 489
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 242/481 (50%), Gaps = 25/481 (5%)
Query: 7 SRLISTG----SYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTG 62
SR +S G + R LCS+ S A P PF + K K+ S
Sbjct: 3 SRFLSAGIRRFVFGARTLCSSEASRAS---AFPMPF--ARKFKFSKQ---------SPLP 48
Query: 63 ALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSYTDFAVYLDLT 121
AL ++ +G V L R+L K RY HALEV EW++++K H D A+ L+L
Sbjct: 49 ALQNWVDQGNDVSPFQLRSIARTLVKSKRYHHALEVFEWIKNQKNFHMIPADHAMKLELI 108
Query: 122 AKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ +G+ AE+YF L + A + LL Y ++ T +A K+ EL + +
Sbjct: 109 IENHGLMEAEEYFMNLPDSAAKKAACLILLRGYVRDRDTSKAETFMLKLYELGLVVSPHP 168
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND--IDGVERVFYE 239
FN + +YL + KV ++ QMK+ I + L+Y +WM + S + VE VF +
Sbjct: 169 FNEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNVLSYNLWMNACSEEEGYVVAAVETVFRQ 228
Query: 240 MCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTS 298
M N+ + W + + LA+ Y KA +KA L LK E ++ +R + FLI+LY +
Sbjct: 229 MLNDRNVEVGWGSLATLANAYKKAGQSKKAILVLKDAEKKLSTCNRLGHFFLITLYASLK 288
Query: 299 NLDAVNRVWGILKSTFPPTN-TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
+ + V R+W K+ + +Y+ +L L KL I K+ F EWES C YD+R+++
Sbjct: 289 DKEGVLRLWEASKAVRGRISCANYICILTCLVKLGDIVQAKRIFLEWESNCQKYDIRVSN 348
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAAL 417
V++ AY++ + EEA + + ++ +K+ E M Y+ +++D A+ M+ AL
Sbjct: 349 VLLGAYVRNGLMEEAESLHLHTLQKGGCPN--YKTLEILMEGYVNWQKMDEAIITMKRAL 406
Query: 418 SEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAG 477
+ K HWRP V + E++ +++ A+++ + +L + S Y +L++ +++A
Sbjct: 407 AMMKDCHWRPPHGIVLAIAEYLEKDGNLEYADKYITDIHNLGLVSLSLYKVLLRMHLSAN 466
Query: 478 K 478
K
Sbjct: 467 K 467
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 190/338 (56%), Gaps = 6/338 (1%)
Query: 94 HALEVIEWMESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL 151
H L+V +WM +R F S +D A+ LDL A+ +G+++AE +F L+ K++ TYGALL
Sbjct: 293 HVLQVYDWMNNRPERFRISASDVAIQLDLIARVHGVSSAESFFLNLTNDLKDKRTYGALL 352
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
N Y E+A +L E M ++L +++ FN + T+ + L +KV LV++MK++NI
Sbjct: 353 NAYVHSRSREKAESLLEVMRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLVSEMKEKNIQ 412
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
LD TY +W+ S I+ +E+VF +M + W+T+S +A++Y+K ELFEKA+
Sbjct: 413 LDIYTYNIWLSSCGSQGSIEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIKMELFEKAQE 472
Query: 272 ALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALA 329
LKK E + RD+ +H+L+SLY + N D V RVW KS FP N Y ++ +
Sbjct: 473 CLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYHAVISSFV 532
Query: 330 KLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF 389
+++ I+ ++ +EEW S S D R+ +++I YL+K ++ F + +
Sbjct: 533 RMDDIERAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEGGGCPNS- 591
Query: 390 FKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRP 427
+ E ++ +++ AL+ +E A + W+P
Sbjct: 592 -TTWELLSEGHIAEKRVSEALSCLEKAFMTSDSKSWKP 628
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 219/440 (49%), Gaps = 23/440 (5%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY R+ A+ S++ LN +I EG+TV K L+ VR ++ F R+ HALE+ +WM R
Sbjct: 24 LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83
Query: 106 KMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
+ +F+ T D A+ LDL + A YGALL+ Y +E E+A
Sbjct: 84 R-YFTLTPSDAAIRLDLISMVPWTXAGXD-------------AYGALLSGYVREKSVEKA 129
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
A +KM E+ F ++ +N L +Y + G K+ L+ +M+ + I D T M +
Sbjct: 130 EATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXNLMVA 189
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD 283
Y +DI +E+ M + W YS AS Y+K L +KA LKK+E +P
Sbjct: 190 YVAASDISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 249
Query: 284 RK--AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ A+ L+SLY T + + RVW + K ++ +Y ++ L KL+ I+ ++ F
Sbjct: 250 ERXSAFKXLLSLYARTXHKQELYRVWNLYKPSY-EYPEAYSCMITCLTKLDDIEGAEKIF 308
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYL 401
+EWE C+ YD R+ + ++ AY ++ ++++A + N K + + Y+
Sbjct: 309 QEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVN---KVIEERMPYASTWNILAKGYV 365
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+Q+ A+ ++ A+S ++ WRP + +D + E + +++ EE ++ K+L
Sbjct: 366 EDKQMPKAVEMLKKAISVGRK-GWRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGIP 424
Query: 462 DFSAYSLLIKTYIAAGKLAS 481
D + L++T A K S
Sbjct: 425 DGDIHHRLLRTSAAGEKSVS 444
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 216/426 (50%), Gaps = 23/426 (5%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVY 117
SV L+ +I EG+T+ +D++ ++ LR++ RY HALE+ WM + R + + AV
Sbjct: 61 SVIPVLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMTDKRYLALTSRAVAVR 120
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
LDL +K +GI E YFN + K +YGALLNCY E+A A+ ++M EL F
Sbjct: 121 LDLISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSVEKAEAVMQRMRELGFAR 180
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ F + +Y + G EK+ PL+ +M++ IS D Y + + SY+ +D +G+E+
Sbjct: 181 KPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLSSYAAASDSEGLEKTL 240
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA--YHFLISLYC 295
+ ++ W TY+ +A+ Y K L +KA LK+ E + +R++ Y +L++ Y
Sbjct: 241 KRIESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLITGERRSTPYDYLMTQYA 300
Query: 296 NTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
T + V RVW + K N + ++ +L K + ++ ++ FEEWES+ D+ +
Sbjct: 301 TTGTKEDVLRVWELHKRYV--GNRKNISVITSLLKFDDLESAEKIFEEWESQKLCDDIII 358
Query: 356 ADVIIRAYLQKDMYEEAALIF-----NNAKKRANASARFFKSRESFMIYYLRSRQLDLAL 410
+ ++ AY +K + E+A ++ N K AN K YL+ Q A+
Sbjct: 359 PNFLVDAYSRKGLLEKAEMLLQRTMSNGTKPNANTWYLLAKG-------YLQHNQTPKAV 411
Query: 411 NEMEA--ALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSL 468
M+ LS + RP V+ + ++ D+D AE F +L+ + +
Sbjct: 412 EAMKEMIVLSGPRS---RPSTVSWVACLQHLKDSGDMDNAEGFINLLREKDIISLDIQDK 468
Query: 469 LIKTYI 474
L+ +YI
Sbjct: 469 LL-SYI 473
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 228/446 (51%), Gaps = 11/446 (2%)
Query: 44 DKLYKRLSALGATGGSVTGALNAY-IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
D L++R++A ++ L + + E + + K ++ ++ L + R+ AL++ WM
Sbjct: 81 DSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWM 140
Query: 103 ESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R +H S D A L+L K +G+ A +YF+ + + K + YG+LL CY + E
Sbjct: 141 TERLHLHLSPGDVAYRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAKCVE 200
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+A LFEKM + + ++ A+N + +YL+ GQ E+V + M++ I D T +
Sbjct: 201 KAEELFEKMRGMG-MASSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDTLV 259
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--M 279
+Y DI+ +E+V E + C D W +Y+ + + +++ + E+A A ++ E+
Sbjct: 260 AAYVVAEDIEAIEKVL-EKADTCNDLMTWHSYATIGKVLMQSGMEERALQAFQESEKKIA 318
Query: 280 KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT--NTSYLVLLQALAKLNAIDIL 337
K +R AY FL+++Y + V+R+W + KS P + N+ Y+ + L K+N I
Sbjct: 319 KKSNRVAYGFLLTMYADLGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDIVGA 378
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFM 397
++ +EEWES+ +D RL ++++ AY ++ + E+A + + K+ F +
Sbjct: 379 EKAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTP--FGNTWYKLA 436
Query: 398 IYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKS 457
Y + Q A + + AL+ W P V +F E+K+V+ AEE +L+
Sbjct: 437 GGYFKVGQASKAADLTKKALASGSN-EWTPDLTNVLMSLNYFAEQKNVEAAEEMASLLQR 495
Query: 458 LNCLDFSAYSLLIKTYIAAGKLASDM 483
L Y L+KTY+ AGK SD+
Sbjct: 496 LITPTRDIYHGLLKTYVNAGKPVSDL 521
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 184/339 (54%), Gaps = 5/339 (1%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LYKR+S LG S+ L+ + EG K+ L ++ L K+ R+ HALEV WM R
Sbjct: 38 LYKRISPLGDPKISIVPVLDEWRGEGNYTSKEELRGMIKELIKYKRFVHALEVSRWMSDR 97
Query: 106 KMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
M F S TDF ++L ++ G+ AE +F + + K + +LL+CY +E E+A
Sbjct: 98 -MFFPLSLTDFGTRINLISRVCGLGEAEVFFENIPKDMKGIAVFSSLLSCYAREKSAEKA 156
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
L E M E +T +N + MY ++ K+ L+ +M+Q +S D T + + +
Sbjct: 157 AKLVEAMKEAGVSMDTRCYNLMMNMYYQMNVHGKLDDLMLEMEQNGVSFDQFTLSIRLSA 216
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD 283
Y+ ++I+G+E+ ++ + E WT YS A+ ++K EL ++A + LKK EE D
Sbjct: 217 YAAASNIEGIEKTIEKISSMSETAIDWTIYSAAANAFLKVELIDEATMMLKKCEEFVNED 276
Query: 284 --RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+A+H L+ LY T + ++RVW K N+ Y +++ + K I+++++ F
Sbjct: 277 SGNEAFHTLLKLYGETGRKEDLSRVWLRFKEERKVFNSGYKIMISSALKFGDIELVEKVF 336
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
+WES SYD R+ +++I Y +KD+ E+A L+ A+
Sbjct: 337 NQWESEKLSYDFRIPNLLINFYCEKDLTEKAELLLKKAE 375
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 196/358 (54%), Gaps = 5/358 (1%)
Query: 24 PTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCV 83
P ++ R + T +D LY+R+S +G SVT L+ +++EG+ V++D L + +
Sbjct: 9 PINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHII 68
Query: 84 RSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ LR + R++HALE+ +WM + R S D A+ ++L + +G+ E YF+ + K
Sbjct: 69 KELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLK 128
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ ALLNCY E ++A A +K+ E+ F + + +N + +Y ++G+ E++ L+
Sbjct: 129 RYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLL 188
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK+R + D TY + + +Y+ +D G+E++ +M + W Y A+ Y K
Sbjct: 189 KEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNK 248
Query: 263 AELFEKAELALKKLEEMKPRDRK---AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT 319
L +K+ LKK E + +K A++ + LY D ++R+W + K N
Sbjct: 249 VGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKE-KIFNK 307
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
++ ++ +L L+ I ++ ++EWE+R SYD+R+ ++++ AY + + E+A ++ N
Sbjct: 308 GFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLN 365
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 205/400 (51%), Gaps = 11/400 (2%)
Query: 92 YRHALEVIEWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGAL 150
Y ALE++ WM+S S +D V LDL AK +G + AE+Y+ LS A + L
Sbjct: 97 YEQALEILSWMDSHNDFRLSPSDHMVRLDLIAKVHGTSQAEEYYRKLSTAASKKAASFPL 156
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
L+CY E ++A ++ + +FN + +Y+ Q EKV ++ MK+ NI
Sbjct: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE 270
+ L+Y +WM + + ++ + V+ F EM N+ + W+TY LA+I+ K KA
Sbjct: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKAL 276
Query: 271 LALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVW---GILKSTFPPTNTSYLVLLQ 326
L+ E ++ R Y F+++ Y ++ D V R+W I+ P N Y+ +
Sbjct: 277 ACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAAN--YMSAMV 334
Query: 327 ALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA-LIFNNAKKRANA 385
L K+ I + F WE+ +D+R+++V++ AY++ E+A L + +K A+
Sbjct: 335 CLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHP 394
Query: 386 SARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDV 445
+ +K+ E M +++S+Q+D A+N M+ LS K HWRP ++ ++FEE+ V
Sbjct: 395 N---YKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSV 451
Query: 446 DGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ A+ F KVL+ N Y L+ YI A + ++ Q
Sbjct: 452 EDADRFIKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQ 491
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 205/400 (51%), Gaps = 11/400 (2%)
Query: 92 YRHALEVIEWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGAL 150
Y ALE++ WM+S S +D V L+L AK +G + AE+Y+ LS A + L
Sbjct: 97 YEQALEILSWMDSHNDFRLSPSDHMVRLELIAKVHGTSQAEEYYRKLSTAASKKAASFPL 156
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
L+CY E ++A ++ + +FN + +Y+ Q EKV ++ MK+ NI
Sbjct: 157 LHCYVTERNVQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNI 216
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE 270
+ L+Y +WM + + ++ + V+ F EM N+ + W+TY LA+I+ K KA
Sbjct: 217 PRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKAL 276
Query: 271 LALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVW---GILKSTFPPTNTSYLVLLQ 326
L+ E ++ R Y F+++ Y ++ D V R+W I+ P N Y+ +
Sbjct: 277 ACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAAN--YMSAMV 334
Query: 327 ALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA-LIFNNAKKRANA 385
L K+ I + F WE+ +D+R+++V++ AY++ E+A L + +K A+
Sbjct: 335 CLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHP 394
Query: 386 SARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDV 445
+ +K+ E M +++S+Q+D A+N M+ LS K HWRP ++ ++FEE+ V
Sbjct: 395 N---YKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIAKYFEEQGSV 451
Query: 446 DGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ A+ F KVL+ N Y L+ YI A + ++ Q
Sbjct: 452 EDADRFIKVLQKFNLTSLPLYKSLLGAYINADIVPQNIPQ 491
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 215/432 (49%), Gaps = 11/432 (2%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSYTDFAVY 117
S + L +I G V+ L + L K RY+ ALE+++WME++ + A+
Sbjct: 61 SPSRVLQDWINNGNKVKLSQLNLISKQLLKSKRYKQALEILQWMENQNNFRITPGHHALM 120
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
++L K NG+ A +YF + + LL+ Y KE +A + K+ L
Sbjct: 121 MELIVKVNGLNKAGEYFERIPGSGSKKAASLPLLHGYVKERDISKAESFMIKLSSSGLLV 180
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+N + +Y+ L Q EKV ++ +MK+ + + L+Y +WM ++ + ++ E V+
Sbjct: 181 TPHPYNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNVLSYNLWMGAFGEVFEVAKAEMVY 240
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCN 296
EM ++ W+T ++LA++Y+KA +KA L LK E ++ R Y FLI+LY +
Sbjct: 241 KEMVSDENVGVGWSTLASLANVYIKAGFVDKALLVLKDAEMKLSTNGRLGYFFLITLYSS 300
Query: 297 TSNLDAVNRVWGILKST---FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
N + V R+W K+ P + Y+ ++ L K+ + +Q F EWE+ C YD+
Sbjct: 301 LKNKEGVLRLWEASKAVGGRIPCAD--YMCVISCLVKVGDLVAAEQVFAEWETNCFKYDI 358
Query: 354 RLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEM 413
R+++V++ AY++ + +A + +R +K+ E M +++S+++D A++ M
Sbjct: 359 RVSNVLLGAYVRNGLMGKAESFHLHTVERGGCPN--YKTWEILMEGWVKSQKMDKAIDAM 416
Query: 414 EAALS--EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIK 471
+ S + ++ WRP + FE+ + + A + K + L Y L ++
Sbjct: 417 KKGFSVLKVERCDWRPSHSILMAIAEHFEKHGNFEDANHYIKAVHGLGVATLPLYKLFLR 476
Query: 472 TYIAAGKLASDM 483
Y+ A + A D+
Sbjct: 477 MYLNAQRPAWDI 488
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 194/389 (49%), Gaps = 13/389 (3%)
Query: 101 WMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
WM R+ +H S D A LDL +K +G+ A +YF + + + YG+LL CY +
Sbjct: 52 WMTDRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKA 111
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
++A F KM E+ + ++ A+ + +YL+ GQ E+V + M+++ + D +
Sbjct: 112 VDKAEEHFAKMQEMG-MTSSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEA 170
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE- 278
+ +Y D+ GV +V + N E W +++ AS+++K+ + A +AL + E
Sbjct: 171 MLAAYIAAEDVQGVGKVL-DKANPHEKLVTWHGHASAASLFMKSGMQVGAVMALVEAERR 229
Query: 279 MKPRD-RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
+ P+ R AY FL+ Y R+W + KS PP NT Y+ L AL + N ID
Sbjct: 230 ISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPPCNTMYMSRLSALLRTNDIDGA 289
Query: 338 KQCFEEWESRCSSY-DMRLADVIIRAYLQKDMYEEAALIFNNA--KKRANASARFFKSRE 394
+ +EWE+ Y D RL +V++ AY ++ + E+A + + A K R + ++K
Sbjct: 290 EATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWYKLAG 349
Query: 395 SFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
F ++ Q+ A++ AL A WRP V F ++KDV AEE
Sbjct: 350 GF----FKTGQVPEAVDMTRKALDSATP-PWRPDLANVLMSLNHFVDQKDVGAAEEMVST 404
Query: 455 LKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
L+ L L Y L+KTY+ AGK SD+
Sbjct: 405 LQKLVPLTRDVYHCLLKTYVRAGKPPSDL 433
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 204/389 (52%), Gaps = 12/389 (3%)
Query: 101 WM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
WM E R +H S D A L+L +K +G+ A +YF+ + + YG+LL CY +
Sbjct: 69 WMTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAER 128
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
E+A LFE M + + N+ A+N + +Y ++GQ E+V + M++ I D T
Sbjct: 129 VEKAEELFENMRGMG-MANSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDN 187
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE- 278
+ +Y+ + D++ +E+V + C + W +++ + +++KA + E+A A ++ E+
Sbjct: 188 LVSAYADVEDVEAIEKVLEKAS--CNNLMSWHSFAIVGKVFMKAGMQERALQAFQESEKR 245
Query: 279 --MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT--NTSYLVLLQALAKLNAI 334
+ R AY FL+++Y + V+R+W + +S P + NT Y+ + L K+N I
Sbjct: 246 ITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDI 305
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRE 394
++ +EEWES+ +D RL ++++ AY ++ + E+A + + K+ F +
Sbjct: 306 VGAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGR--TLFSNTWY 363
Query: 395 SFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
Y + Q+ A + + AL+ A W+P V +F E+K+V+ AEE +
Sbjct: 364 KLAGGYFKVGQVSKAADLTKKALASASN-EWKPDLANVLMSINYFAEQKNVEAAEEMASL 422
Query: 455 LKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
L+ L L Y L+KTY+ AG+ ASD+
Sbjct: 423 LQRLVPLTRDVYHGLLKTYVNAGEPASDL 451
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 215/425 (50%), Gaps = 7/425 (1%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSYTDFAVY 117
S AL ++ EG V L R+L K Y HALEV++W+E++K H D+A+
Sbjct: 70 SPLPALKNWVDEGNDVSHSELRRIARTLVKSKCYHHALEVVKWIENQKNFHMIPADYAMK 129
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
L+L + + AE+YF L + A + LL Y + T +A K+ EL +
Sbjct: 130 LELIIENYDLMEAEEYFMNLPDSAAKKAACLTLLRGYIRVRDTNKAETFMVKLYELGLVL 189
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN--DIDGVER 235
+ FN + +YL + KV ++ QMK+ + + L+Y +WM + + + VE
Sbjct: 190 SPHPFNEMMKLYLATCEYRKVPLVMQQMKRNKVPCNVLSYNLWMNACTEEEGYGVAAVET 249
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLY 294
VF +M N+ + W++ + LA+ Y KA +KA L LK E ++ +R Y FLI+LY
Sbjct: 250 VFRQMQNDRNVEVGWSSLATLANAYKKAGQSKKAILVLKDAERKLSTCNRLGYFFLITLY 309
Query: 295 CNTSNLDAVNRVWGILKSTFPPTN-TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
+ + V R+W K+ + +Y+ +L L KL I K+ F EWES C YD+
Sbjct: 310 ASLKEKEGVLRLWEASKAVGGRISCANYICILICLVKLGDIVQAKRIFLEWESNCQKYDI 369
Query: 354 RLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEM 413
R+++V++ AY + EEA + + ++ +K+ E M Y+ +++D A+ M
Sbjct: 370 RVSNVLLGAYARNGSMEEAESLHLHTLQKGGCPN--YKTLEILMEGYVNWQKMDEAIITM 427
Query: 414 EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTY 473
+ AL+ K HWRP V + E++ ++ A ++ L++ S Y +L++ +
Sbjct: 428 KRALAMMKDCHWRPPHGLVLAIAEYLEKDGNLKYANKYITDLRNFGLFSLSLYKILLRMH 487
Query: 474 IAAGK 478
++A K
Sbjct: 488 LSANK 492
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 224/432 (51%), Gaps = 9/432 (2%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSYTDFAVY 117
SVT L I G V L + + L + RY AL++IEWME++K + FS D ++
Sbjct: 50 SVTSLLQERIDSGHAVALSELRFISKRLIRSNRYDLALQMIEWMENQKEIQFSVYDISLR 109
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKN----RYTYGALLNCYCKELMTERALALFEKMDEL 173
L+L KT+G+ AE+YF L + + + Y LL Y K+ M + EK++ L
Sbjct: 110 LELIIKTHGLKQAEEYFEKLLNSSASLRVAKSAYLPLLRSYVKKKMVKEGEVFMEKLNGL 169
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
FL FN + +Y GQ EKV +V+ MK I + L+Y +WM + ++ + V
Sbjct: 170 GFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNKIPRNVLSYNLWMNACCQVSGVTAV 229
Query: 234 ERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLIS 292
E V+ EM + + W++ LA++Y+K EKA+L L+ E++ R +R Y FLI+
Sbjct: 230 ETVYREMVGDKSVEVGWSSLCTLANVYIKGGFDEKAKLVLENAEKLLNRSNRLGYFFLIT 289
Query: 293 LYCNTSNLDAVNRVWGILKSTFPPTN-TSYLVLLQALAKLNAIDILKQCFEEWESRCSSY 351
LY + + + V R+W K + +Y+ +L +L K+ ++ ++ F EWE++C +Y
Sbjct: 290 LYASLGDKEGVVRLWEASKLVCGRISCANYICVLSSLVKIGDLEEAERVFNEWEAQCFNY 349
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALN 411
D+R+++V++ AY++ +A + +R +K+ E M +++ + ++ A+
Sbjct: 350 DVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNPN--YKTWEILMEGWVKCQSMEKAIV 407
Query: 412 EMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIK 471
M A K HWRP + V ++FEEE+ ++ A + + L L Y LL++
Sbjct: 408 AMHRAFELMKGCHWRPSESIVMAIAKYFEEEEKIEEANTYIRDLHHLGLASLPLYRLLLR 467
Query: 472 TYIAAGKLASDM 483
A + A D+
Sbjct: 468 MQEHAQRPAFDI 479
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 181/353 (51%), Gaps = 6/353 (1%)
Query: 25 TETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVR 84
+ T+ + +P N+D L R+ L SVT L ++ EG V L +
Sbjct: 26 SRTLRSEVLEESPNSPENDD-LKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISK 84
Query: 85 SLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN 143
LR+ RY+HALE+ EWM S + S +D AV +DL + GI AAE+YF GL AK
Sbjct: 85 ELRRAQRYKHALEISEWMVSHDEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKT 144
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY ALL+ Y + E+A L+E++ E N + +N + T+Y+ +GQ EKV +V
Sbjct: 145 SETYTALLHSYAGAKLAEKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVE 204
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
++K++ + D TY +W+ S + DIDGV R+ EM N W Y NLA+IY+ A
Sbjct: 205 ELKRQKVVPDLFTYNLWVSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMA 264
Query: 264 -ELFEKAELALKKL-EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-S 320
L A ++ + RD Y FLI LY N D ++++W LK T + S
Sbjct: 265 GHLVNSASNSVVEAGTNTTQRDWITYDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRS 324
Query: 321 YLVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEA 372
Y+ +L + L I + +EW +S + +D+ + ++ A+ + + EEA
Sbjct: 325 YVCILSSYVMLGHIKDVGIVIDEWKKSTTTDFDISVFYRLLDAFAELRLIEEA 377
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 212/421 (50%), Gaps = 22/421 (5%)
Query: 64 LNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTA 122
LN Y +E K+V D E ++ LR G + +WM + R + D A+ ++L
Sbjct: 77 LNCYALE-KSV--DKAEAIMQRLRDLGF------ISQWMSDKRYIPLMPRDIALRMNLIL 127
Query: 123 KTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
K +G+ E YFN + + K Y ALLNCY E ++A A+ +++ +L F+ + +
Sbjct: 128 KVHGLEQVENYFNNIHKNLKTYQVYIALLNCYALEKSVDKAEAIMQRLRDLGFVRTALGY 187
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N L +Y R+G EK+ L+++M+++ I D T + + +Y+ ++I G++ + M +
Sbjct: 188 NTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAIRLSAYAAASNIVGIDNIVTRMES 247
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNL 300
+ W +Y+ +A Y+K L +K + +KKLEE+ A+ L+ LY T
Sbjct: 248 DPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKLEELIDAKGSNVAFDNLLKLYAETRQR 307
Query: 301 DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
D ++RVW + K N Y+ ++ +L K + ID ++ EEWESR SYD R+ + +I
Sbjct: 308 DELDRVWMLYKKKEKIYNKGYMAMISSLLKFDDIDAAEKVLEEWESRRLSYDFRVPNFLI 367
Query: 361 RAYLQKDMYEEAALIFNNAKKRAN---ASARFFKSRESFMIYYLRSRQLDLALNEMEAAL 417
AY +K + E+A + N + F+ + YL Q+ A+ ++ A+
Sbjct: 368 DAYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLANG-----YLEDSQIPKAVEALKKAV 422
Query: 418 SEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAG 477
+W+P + T+ T + E +DV+GA EF + L++ L+ +YI G
Sbjct: 423 VVCPP-NWKPSKNTLATCLEYLEGNRDVEGAGEFIRFLQNEGIFSVGVCKRLL-SYIENG 480
Query: 478 K 478
K
Sbjct: 481 K 481
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 198/379 (52%), Gaps = 12/379 (3%)
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
E R S D A+ LDL AK G+ AEK+F + +N + YGALLNCY + + +
Sbjct: 3 EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 62
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A +F++M EL FL + +N + +Y+R G+ V L+ +M+ + D T +
Sbjct: 63 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 122
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--K 280
+YS ++D++G+E+ + W TY++ A+ Y+KA L EKA L+K E+M
Sbjct: 123 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNA 182
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
+ + AY L+S Y + V R+W + K NT Y+ ++ AL K++ I+ +++
Sbjct: 183 QKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKI 242
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN--NAKKRANASARFFKSRESFMI 398
EEWE+ S +D+R+ ++I Y +K M E+A + N K R ++ + E +
Sbjct: 243 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTW----ERLAL 298
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
Y + +++ A+ + + A+ E + WRP QV + + + E ++D++G K+L+ L
Sbjct: 299 GYKMAGKMEKAVEKWKRAI-EVSKPGWRPHQVVLMSCVDYLEGQRDMEG---LRKILRLL 354
Query: 459 NCLDFSAYSLLIKTYIAAG 477
+ +Y L+ AG
Sbjct: 355 SERGHISYDQLLYDMNGAG 373
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 185/337 (54%), Gaps = 6/337 (1%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESRKMHFSY-TDFAVYLDLTAKTNGIAAAEKYFNGL 137
L V+ K RY ALE + ME+R Y + A+ L+LT K +G+ AE+YFN L
Sbjct: 95 LRRVVKKFCKSKRYERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQL 154
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
A + + LL+ Y KE TE+A A K+ + + N +N + +Y+ Q EK
Sbjct: 155 PTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEK 214
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
V ++ MKQ I + L+Y +WM + S L + +E VF EM + + W+T LA
Sbjct: 215 VPLVIKDMKQNLIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWSTMCTLA 274
Query: 258 SIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFP 315
++Y++ L EKA ALK+ E ++ P R Y FLI+LY + + + V RVW K+ +
Sbjct: 275 NVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGN 334
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
PT +Y+ +L L KL ID ++ F+EWE C +YD+R+++V++ AY++ + E+A +
Sbjct: 335 PTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESL 394
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQ-LDLALN 411
+ R +K+ E M ++RS+Q +D A+N
Sbjct: 395 HRHTLGRGGNPN--YKTWEILMEGWVRSQQNVDRAIN 429
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 185/337 (54%), Gaps = 6/337 (1%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESRKMHFSY-TDFAVYLDLTAKTNGIAAAEKYFNGL 137
L V+ K R+ ALE + ME+R Y + A+ L+LT K +G+ AE+YFN L
Sbjct: 95 LRRVVKKFCKSKRFERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQL 154
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
A + + LL+ Y KE TE+A A K+ + + N +N + +Y+ Q EK
Sbjct: 155 PTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEK 214
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
V ++ MKQ I + L+Y +WM + S L + +E VF EM + + W+T LA
Sbjct: 215 VPLVIKDMKQNQIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWSTMCTLA 274
Query: 258 SIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFP 315
++Y++ L EKA ALK+ E ++ P R Y FLI+LY + + + V RVW K+ +
Sbjct: 275 NVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGN 334
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
PT +Y+ +L L KL ID ++ F+EWE C +YD+R+++V++ AY++ + E+A +
Sbjct: 335 PTCANYICILLCLVKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESL 394
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQ-LDLALN 411
+ R +K+ E M ++RS+Q +D A+N
Sbjct: 395 HRHTLGRGGNPN--YKTWEILMEGWVRSQQNVDRAIN 429
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 177/339 (52%), Gaps = 5/339 (1%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
+ L R+ L S L + EG V L + LRK RY+HALE++EWM
Sbjct: 56 NDLKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMV 115
Query: 104 SR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
S + S +DFA+ +DL K G+ AAE+YF GL AK TY ALL+ + +T++
Sbjct: 116 SHNQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDK 175
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A L+EKM E + FN + T+Y +GQ EKV +V+ +KQR + D TY +W+
Sbjct: 176 AETLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWIS 235
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE--LFEKAELALKKLEEMK 280
S + +IDGV+++ EM + W Y L +IYVK+ L ++ ++ + +
Sbjct: 236 SLAAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGIS 295
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQ 339
R+ Y LI LY N D ++++W L+ T T+ +Y+ ++ L+ + + +
Sbjct: 296 QREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGE 355
Query: 340 CFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
++W +S + +D+ + ++ A+++ ++E+A N
Sbjct: 356 VIDQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVN 394
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 213/420 (50%), Gaps = 16/420 (3%)
Query: 54 GATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES-RKMHFSYT 112
G SV+ LN ++ EG+ V K LE L + R+ HAL+V+EWM + R S
Sbjct: 32 GDPLSSVSPILNQWVEEGREVTKLQLEDLAYRLTQSRRFTHALQVLEWMSNERNYELSPG 91
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
A ++L +K +G+ AE+YF G+ + Y ALL CY + E A A+ + + E
Sbjct: 92 SIAKQINLISKVHGLEQAERYFRGIPDDKIEFKIYAALLRCYAEHKSVEEAEAVMKXIKE 151
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
L + T N + +Y + G+ EK+ L+ +MK+++I + TY + + +Y + DI G
Sbjct: 152 LHPVNITPCCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NASTYTIRLNAYVVVTDIKG 210
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD--RKAYHFL 290
+E++ +M + W TY A+ Y + FEK LKK E + + R A+ +
Sbjct: 211 MEKLLMQMEADPVATVDWYTYMTAANGYRRVHNFEKVAEMLKKSEHLARGNTRRLAFESI 270
Query: 291 ISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
++Y N D V R+W + S P N+SY+ +L +LAKL+ ID ++ EEWES+ ++
Sbjct: 271 QTMYAIIGNKDEVYRLWNMCTSLKKPNNSSYIRMLSSLAKLDEIDGAEKILEEWESKYAN 330
Query: 351 YDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR--ESFMIYYLRSRQLDL 408
+D+R+ +++I AY + +++A +R + R + Y ++
Sbjct: 331 FDVRIPNLMISAYCKWGQFDKAEAYI----RRLLDGGKQLDGRTWDRLACGYKAGNDMEK 386
Query: 409 ALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSL 468
A+ M+ A+S+ RP T+ ++ +E+ D+D A E K+ C++ S S+
Sbjct: 387 AVQAMKKAVSKNLGGR-RPDPFTLVACVKYLKEKGDLDLALEILKL-----CIENSHISV 440
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 40/232 (17%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNT--VAFNNLSTMYLRLGQPEKVRPLV 202
YTY N Y + E+ + +K + L GNT +AF ++ TMY +G ++V L
Sbjct: 229 YTYMTAANGYRRVHNFEKVAEMLKKSEHLA-RGNTRRLAFESIQTMYAIIGNKDEVYRLW 287
Query: 203 N---QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW-TTYSN--- 255
N +K+ N N +YI + S + L++IDG E++ E W + Y+N
Sbjct: 288 NMCTSLKKPN----NSSYIRMLSSLAKLDEIDGAEKILEE----------WESKYANFDV 333
Query: 256 -----LASIYVKAELFEKAELALKKL-EEMKPRDRKAYHFLISLYCNTSNLD-------- 301
+ S Y K F+KAE +++L + K D + + L Y ++++
Sbjct: 334 RIPNLMISAYCKWGQFDKAEAYIRRLLDGGKQLDGRTWDRLACGYKAGNDMEKAVQAMKK 393
Query: 302 AVNRVWGILKSTFPPTNTSYLVLLQALAKLN-AIDILKQCFEEWESRCSSYD 352
AV++ G + P T + + L+ L+ A++ILK C E +SYD
Sbjct: 394 AVSKNLGGRRPD-PFTLVACVKYLKEKGDLDLALEILKLCIENSHISVTSYD 444
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 208/401 (51%), Gaps = 14/401 (3%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
L YC R F L++ EWM ++ +M D AV+LDL AK G+ +AEK+F +
Sbjct: 13 LLYCRRDASPF-----CLQICEWMRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDM 67
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
E AK T ALL+ Y + ++A A+ E+M + +L + FN++ ++Y+ G+ EK
Sbjct: 68 PERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEK 127
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
V ++ ++++ I D +TY +W+ S N + E+V Y++ + W T+S L
Sbjct: 128 VPEMIKELRRYTIP-DLVTYNIWLTYCSKKNSVKAAEKV-YDLMKDERVVPDWMTFSLLG 185
Query: 258 SIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP 316
SIY+ A L K AL ++E+ R +R AY L++LY + S+ ++RVW ++ TF
Sbjct: 186 SIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRK 245
Query: 317 -TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
++T Y +L +L + I + + EWES + D R+ + I+ Y++ M E+A
Sbjct: 246 FSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGF 305
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTF 435
++ ++ + + + E F+ YL ++D L ++ ALS ++ W P
Sbjct: 306 LDHIVQKGVKPS--YSTWELFVWGYLSDGRMDKVLECLKKALSCLEK--WDPNPQLATAI 361
Query: 436 FRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAA 476
+ EE+ D++ AE+ + + + Y+ +++TY A
Sbjct: 362 YSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNSVLRTYAKA 402
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 219/435 (50%), Gaps = 15/435 (3%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
D L +RL L S L + EG+TV+K L V LRK+ R++HALE
Sbjct: 28 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVCQLRKYRRFKHALE------ 81
Query: 104 SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERA 163
RK+ F ++ G+ +AEK+F + E AK T ALL+ Y + ++A
Sbjct: 82 -RKLSFFRGPRRCTSTSCQRSGGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKA 140
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
A+ E+M + +L + FN++ ++Y+ G+ EKV ++ ++++ I D +TY +W+
Sbjct: 141 EAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTY 199
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR- 282
S N + E+V Y++ + W T+S L SIY+ A L K AL ++E+ R
Sbjct: 200 CSKKNSVKAAEKV-YDLMKDERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRK 258
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCF 341
+R AY L++LY + S+ ++RVW ++ TF ++T Y +L +L + I + +
Sbjct: 259 ERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFY 318
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYL 401
EWES + D R+ + I+ Y++ M E+A ++ ++ + + + E F+ YL
Sbjct: 319 SEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPS--YSTWELFVWGYL 376
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
++D L ++ ALS ++ W P + EE+ D++ AE+ + + +
Sbjct: 377 SDGRMDKVLECLKKALSCLEK--WDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYV 434
Query: 462 DFSAYSLLIKTYIAA 476
Y+ +++TY A
Sbjct: 435 TTEIYNSVLRTYAKA 449
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 212/426 (49%), Gaps = 60/426 (14%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
++ L R+S S+ AL + EG+++++ L +R LR F RY HALE+ EW+
Sbjct: 34 KESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWI 93
Query: 103 ESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMT 160
K +F S D A+ LDL +K +G+ AEKYFN ++ YGALLNCY ++
Sbjct: 94 RD-KFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSL 152
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
E+A A+ ++M ++ F+ T+++N + +Y RLG+ EK+ L+ +M++ I LD+ TY +
Sbjct: 153 EKAEAIMQEMRDMGFV-KTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIR 211
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
+ +Y +D++G+E++ ++ + W Y A+ Y+KA+L EKA LK
Sbjct: 212 LNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLK------ 265
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
+L KL+ +D ++
Sbjct: 266 ---------------------------------------------NSLLKLDDMDGAEKT 280
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY 400
FEEW S +D R+ +++IRAY +K + E+A + + A ++ + ++ Y
Sbjct: 281 FEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAV--TWDALAAGY 338
Query: 401 LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC 460
+ Q++ A++ ++ AL Q W+P VT+ + + + DV+ AE ++L+ +
Sbjct: 339 HENNQMEKAVDTLKKALLATSQ-GWKPNPVTLSACLEYLKGKGDVEEAENLIRLLREQSL 397
Query: 461 LDFSAY 466
+ SAY
Sbjct: 398 V--SAY 401
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 221/443 (49%), Gaps = 18/443 (4%)
Query: 34 APTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYR 93
AP F L R+ G + LN ++ G + + L+ + L F R+
Sbjct: 29 APVDFSA-----LETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFT 83
Query: 94 HALEVIEWMES-RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLN 152
HAL+V EWM + R S A + L +K +G+ AE +F G+ + + Y +LL+
Sbjct: 84 HALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLS 143
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
CY + E A A+ +K+ EL+ + TV +N L +Y + G+ EK+ L+ +MK+ ++
Sbjct: 144 CYAEHKSLEEAEAIMKKIKELRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLC- 202
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
+ T+ + + +Y D++G+E++ +M + W TYS A+ Y+KA EKA A
Sbjct: 203 NGATFTIRLNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAA 262
Query: 273 LKKLEE-MKPRD-RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAK 330
LKK E+ +K + R AY L S Y N D V R+W +K+ N+SY+ +L +L K
Sbjct: 263 LKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLK 322
Query: 331 LNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN---NAKKRANASA 387
L+ D ++ EWES ++D R+ +++I AY ++ + ++A ++ K+ + S
Sbjct: 323 LDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGS- 381
Query: 388 RFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDG 447
S + Y ++ A+ M+ A+ A + WRP T+ + +E+ D++
Sbjct: 382 ----SWDRMAAGYHMDNDMEKAVQTMKKAIL-ANRPGWRPSPSTLVACITYLKEKLDLES 436
Query: 448 AEEFCKVLKSLNCLDFSAYSLLI 470
A E K+ K + + Y L+
Sbjct: 437 ALEILKLCKEDGHIKITTYDGLV 459
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 212/430 (49%), Gaps = 12/430 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES- 104
L R+ +G V+ L ++ EG+ V K LE V L + R+ HAL+V+EWM +
Sbjct: 24 LENRVFKVGDPVIPVSPILKQWVEEGREVTKLQLENLVYRLTQSRRFTHALQVLEWMSNE 83
Query: 105 RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
R S + A ++L +K G+ AEKYF G+ + Y ALL CY + E A
Sbjct: 84 RNYELSPGNIAKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSVEEAE 143
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
A+ +K+ EL + T N + +Y + G+ EK+ L+ +MK+++I + TY + + +Y
Sbjct: 144 AVLKKIKELHPVNITACCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NAGTYTIRLNAY 202
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPR 282
DI G+E++ +M + W TY A+ Y K FEK LKK E +
Sbjct: 203 VIATDIKGMEKLLMQMEVDPMATVDWYTYMTAANGYRKVHNFEKVAAMLKKSEHVARGKT 262
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
R AY + ++Y N D V+R+W + S P N SY+ +L +L KL+ ID ++ E
Sbjct: 263 KRLAYESIQTMYAIIGNKDEVHRLWNMCTSPKKP-NKSYIRMLSSLVKLDDIDGAEKILE 321
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR--ESFMIYY 400
EWES ++D+R+ +++I AY + +++A +R + R + Y
Sbjct: 322 EWESVHENFDVRIPNLMISAYCKWGQFDKAEAYI----RRLLDGGKHLDGRTWDRLACGY 377
Query: 401 LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC 460
++ A+ M+ A+S RP T+ ++ +E+ D+D A E K+ +
Sbjct: 378 NAGNDMENAVQAMKKAVS-TNLAGRRPDPFTLVACVKYLKEKGDLDLALEILKLCIENSH 436
Query: 461 LDFSAYSLLI 470
+ ++Y L+
Sbjct: 437 ISVTSYDGLV 446
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 167/318 (52%), Gaps = 8/318 (2%)
Query: 1 MMIRNQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSV 60
+ +R S IST S+ + C A T F ++D + L S
Sbjct: 8 LSLRRNSGFISTNSHHHQSRCLLNRARFVSSGAVSTDFVESDDDLRSRILRLR-LPKRSA 66
Query: 61 TGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMH-FSYTDFAVYLD 119
T L+ +++EG +V L + LR+ RY+HALE+ EWM + + H S +D+A+ +D
Sbjct: 67 TNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDYAMRID 126
Query: 120 LTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNT 179
L K GI AAE+YF L AK TY ALL+ Y MTE+A L++++ + +
Sbjct: 127 LMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDA 186
Query: 180 VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
+ +N + T+Y+ +GQ EKV +V ++KQRN+S D TY +W+ S + +ID V R+ E
Sbjct: 187 LTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDE 246
Query: 240 MCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYC 295
M + + WT Y NLA++YV A + + + L E + R ++ Y FLI LY
Sbjct: 247 MSHGADSNESWTRYLNLANVYVTASRLDNS--SSNSLAETEKRITQSQWITYDFLIILYA 304
Query: 296 NTSNLDAVNRVWGILKST 313
+ D ++++W L+ T
Sbjct: 305 GLGSKDKLDQIWNSLRMT 322
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 187/369 (50%), Gaps = 22/369 (5%)
Query: 5 NQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGAL 64
N++R +S+G+ ++ V + + G +D L R+ L S T L
Sbjct: 21 NRTRFVSSGA--------VSSDLVEESVE-------GVDDDLRSRIFRLRLPKRSATNVL 65
Query: 65 NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMH-FSYTDFAVYLDLTAK 123
++++G V L + LR+ RY+HALE+ EWM S + + S +D+A +DLT K
Sbjct: 66 QKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSHEEYELSDSDYAARIDLTTK 125
Query: 124 TNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
GI AAE+YF GL K TY ALL+ Y +T++A L++++ + + + +N
Sbjct: 126 VFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEELYQRIKDSNLSFDALTYN 185
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+ T+Y+ +GQ EKV +V ++KQ+ +S D TY +W+ + + +ID V R+ EM +
Sbjct: 186 EMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCAAILNIDEVRRILDEMSHG 245
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAE--LALKKLEEMKPRDRKAYHFLISLYCNTSNLD 301
W Y NLA+IY+ + A ++ + + R Y FLI LY + D
Sbjct: 246 AGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQWITYDFLIILYGGLGSKD 305
Query: 302 AVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVI 359
++++W L+ T + +Y+ ++ + L + + ++W +S + +DM I
Sbjct: 306 KLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVIDQWKQSTTTDFDMLACKKI 365
Query: 360 IRAYLQKDM 368
+ A+ +DM
Sbjct: 366 MVAF--RDM 372
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 152/281 (54%), Gaps = 23/281 (8%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
LY ++S LG SV L+ ++ G V L+ + LRK R+ ALE+ EWM +
Sbjct: 41 LYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKK 100
Query: 106 KM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
+ FS T+ AV LDL + G +AE YFN L + K TYGALLNCY ++ T+++L
Sbjct: 101 GICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSL 160
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ +KM E+ F + + +N++ +Y +GQ EKV ++ +MKQ N+ DN +Y + + SY
Sbjct: 161 SHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSY 220
Query: 225 SHLNDIDGVERVFYEMCNECEDKCR-WTTYSNLASIYVKAELFEKAE-LALKKLEE---- 278
+DI G+E V EM E + R Y++L S+Y A L KAE L L LE+
Sbjct: 221 GAQSDIQGMENVLKEM--ERQPHIRDGLGYNHLISLY--ASLGNKAEVLRLWSLEKNVEA 276
Query: 279 -------MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
+ P +R+ YH LI +N+ A V G+L S
Sbjct: 277 FVGSLRIVIPMNRRMYHTLI-----MANIRAGKEVDGLLAS 312
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 168/329 (51%), Gaps = 11/329 (3%)
Query: 42 NEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW 101
NED L R+ L SVT ++ ++ EG TV L + + LRK R++HALE+ EW
Sbjct: 6 NEDDLKGRIFRLRLPKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEISEW 65
Query: 102 MESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMT 160
M + + S TD A +DL K G+ AAE+YF+GL AK TY ALL+ Y +
Sbjct: 66 MVAHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKLI 125
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
E+A ++++ + +N + T+Y+ +GQ EKV +V ++K + ++ D TY +W
Sbjct: 126 EKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNLW 185
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-- 278
+ S + +ID V R+ EM + W Y + +IYV A AE + + E
Sbjct: 186 ISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEAE 245
Query: 279 --MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAID 335
+ R+ Y FL+ LY D ++++W L+ T T+ +++ +L + L +
Sbjct: 246 KKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGHLK 305
Query: 336 ILKQCFEEW-ESRCSSYDM----RLADVI 359
+ + ++W +S + +D+ RL D I
Sbjct: 306 EVGEIVDQWKQSTTTDFDISACNRLLDAI 334
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 184/368 (50%), Gaps = 25/368 (6%)
Query: 3 IRNQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTG 62
+ N++R +S+G+ ++ V + + +D L R+ L S T
Sbjct: 24 VLNRTRFVSSGA--------VSSDLVEESVEG--------DDDLRSRIFRLRLPKRSATN 67
Query: 63 ALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMH-FSYTDFAVYLDLT 121
L ++++G + L + LR+ RY+HALE+ EWM S + + S +D+AV +DL
Sbjct: 68 VLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSNEEYELSDSDYAVRIDLM 127
Query: 122 AKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ GI AAE+YF GL K TY ALL+ Y +TE+A L++++ + + +
Sbjct: 128 TQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQRIKDSNLSFDALT 187
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
+N + T+Y+ +GQ EKV +V ++KQ+ +S D TY +W+ S + + +ID V R+ EM
Sbjct: 188 YNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSCAAILNIDEVRRILDEMS 247
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAE--LALKKLEEMKPRDRKAYHFLISLYCNTSN 299
+ W Y NLA+IY+ + A ++ + + R Y FLI LY +
Sbjct: 248 HGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRITQRQWITYDFLIILYGGLGS 307
Query: 300 LDAVNRVW---GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRL 355
D ++++W G+ K N Y+ ++ + L + + ++W +S + +DM
Sbjct: 308 KDKLDQIWNSLGMTKQKMISRN--YMCIISSYLMLGLTKEVGEVIDQWKQSTTTDFDMLA 365
Query: 356 ADVIIRAY 363
I+ A+
Sbjct: 366 CKKILVAF 373
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 173/329 (52%), Gaps = 8/329 (2%)
Query: 109 FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFE 168
F+ D AV L L + G+ AE YFN LS K +YTYGA+LN +E ++A A+ +
Sbjct: 9 FTTEDAAVRLGLIHRVRGLEEAENYFNKLSVKLKTKYTYGAILNGCVREKSVQKAEAVMQ 68
Query: 169 KMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN 228
+M E ++ +N L +Y + G +K+ PL+ +M++ I+ D T + + +
Sbjct: 69 EMREGGMTTSSFPYNILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNLIAASVAAS 128
Query: 229 DIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRKA- 286
DI GVER+ M E W Y+ A Y+K E A L+KLE+ M R +KA
Sbjct: 129 DISGVERILKLMEENPELGLDWKLYAMAADAYLKIGSIETALTMLEKLEKWMAFRKKKAV 188
Query: 287 YHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
++FL+SLY T N D + R+W + K + +TSY ++ +L KL+ I+ ++ FEEWES
Sbjct: 189 FNFLLSLYAKTGNKDELYRIWNLYKPSSESMDTSYCCMIDSLTKLDDIEGAEKIFEEWES 248
Query: 347 RC-SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQ 405
+C ++YD R+ + ++ AY + ++E+A +K + + Y+ Q
Sbjct: 249 QCTTTYDFRVLNGLLVAYCNRGLFEKAEAAI---EKAVQGRTPYASTWHVMAKGYMEHDQ 305
Query: 406 LDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+ + ++ A++ + W+P + V+T
Sbjct: 306 IPKTVEMLKRAVNVGRD--WKPDPILVNT 332
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 172/329 (52%), Gaps = 10/329 (3%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
+D L R+ L S T L +I EG + + L + LR+ RY+HALEV EWM
Sbjct: 54 KDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWM 113
Query: 103 -ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
+ + S D+A +DL +K GI AAE+YF GL +K TY +LL+ Y TE
Sbjct: 114 VQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTE 173
Query: 162 RALALFEKM---DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
RA ALF+++ D L F + +N + T+Y+ +GQ EKV ++ +KQ+ +S D TY
Sbjct: 174 RAEALFKRIIESDSLTF--GAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYN 231
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE--LALKKL 276
+W+ S + +ID + ++ EM ++ W Y +L SIY+ + AE L ++
Sbjct: 232 LWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAE 291
Query: 277 EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAID 335
+ + R+ Y FL+ L+ N ++++W L++T ++ SY+ +L + L +
Sbjct: 292 KSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLR 351
Query: 336 ILKQCFEEW-ESRCSSYDMRLADVIIRAY 363
++ +W ES+ + +D I+ A+
Sbjct: 352 EAEEIIHQWKESKTTEFDASACLRILNAF 380
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 172/329 (52%), Gaps = 10/329 (3%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
+D L R+ L S T L +I EG + + L + LR+ RY+HALEV EWM
Sbjct: 54 KDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWM 113
Query: 103 -ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
+ + S D+A +DL +K GI AAE+YF GL +K TY +LL+ Y TE
Sbjct: 114 VQHEESKISDADYASRIDLISKVFGIDAAERYFEGLHIDSKTAETYTSLLHAYAASKQTE 173
Query: 162 RALALFEKM---DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
RA ALF+++ D L F + +N + T+Y+ +GQ EKV ++ +KQ+ +S D TY
Sbjct: 174 RAEALFKRIIESDSLTF--GAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYN 231
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE--LALKKL 276
+W+ S + +ID + ++ EM ++ W Y +L SIY+ + AE L ++
Sbjct: 232 LWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAE 291
Query: 277 EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAID 335
+ + R+ Y FL+ L+ N ++++W L++T ++ SY+ +L + L +
Sbjct: 292 KSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLR 351
Query: 336 ILKQCFEEW-ESRCSSYDMRLADVIIRAY 363
++ +W ES+ + +D I+ A+
Sbjct: 352 EAEEIIHQWKESKTTEFDASACLRILNAF 380
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 169/327 (51%), Gaps = 6/327 (1%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
+D L R+ L S T L ++ EG + + L + LR+ R++HALEV EWM
Sbjct: 55 KDDLKSRIFRLRLPKRSATTVLERWVGEGNQITINELREISKELRRTRRHKHALEVTEWM 114
Query: 103 -ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
+ ++ S D+A +DL +K GI AAE+YF GL AK TY +LL+ Y TE
Sbjct: 115 VQHEELKVSDADYASRIDLISKVFGIDAAERYFEGLHIDAKTTETYTSLLHAYAGSKQTE 174
Query: 162 RALALFEKMDELKFLG-NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
RA ALF+++ E L + +N + T+Y+ +GQ EKV ++ +K + +S D TY +W
Sbjct: 175 RAEALFKRIIETDSLSFGAITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTYNLW 234
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA--LKKLEE 278
+ S + +ID + R+ EM ++ W Y NL SIY+ + AE ++ +
Sbjct: 235 LSSCAATFNIDELRRILEEMRHDASSNEGWVRYINLTSIYINSSRVTNAESTSPVEAEKS 294
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDIL 337
+ R+ Y FL+ L+ N ++++W L +T ++ SY+ +L + L +
Sbjct: 295 ISQREWITYDFLMILHTGLGNKVMIDQIWKSLGNTNQKLSSRSYICVLSSYLMLGHLREA 354
Query: 338 KQCFEEW-ESRCSSYDMRLADVIIRAY 363
++ +W ES+ + +D I+ A+
Sbjct: 355 EEIIHQWKESKTTEFDASACLRILNAF 381
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 177/368 (48%), Gaps = 40/368 (10%)
Query: 91 RYRHALEVIEWMES-RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGA 149
RY ALE+ WMES + S D A LDL AK + AE+Y+N L A +
Sbjct: 123 RYEQALEIFSWMESCSSLRLSSWDHAARLDLIAKAYSTSQAEEYYNKLQSPATRQAASFP 182
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
LL+CY E EKV +++ MK+ N
Sbjct: 183 LLHCYVMER-----------------------------------DHEKVLSVIDLMKRNN 207
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
I + L+Y +WM + + ++ +D V+ VF M N+ K W+TY LA+I+ K L +A
Sbjct: 208 IHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLNDETVKVGWSTYCTLANIFRKNGLNTEA 267
Query: 270 ELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQA 327
+ L K E ++ P R Y F+++ Y ++ D V R+W KS T+ Y+ +
Sbjct: 268 QACLVKAEAKLSPTGRLGYSFVMTCYAALNDSDGVMRMWEASKSVPGRILTAYYMAAMSC 327
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASA 387
K+ I + F +WE+ C +D+R+++V++ AY++ E+A + + ++ +
Sbjct: 328 SIKVGDISQAECIFGKWEAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEK--GAC 385
Query: 388 RFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDG 447
+K+ E M Y++SRQ+D A+ M+ LS K HWRP ++ + FEE+ D
Sbjct: 386 PNYKTWEILMEGYVQSRQMDKAVGCMKKGLSLLKSCHWRPPVELMEAIGKHFEEQGSADD 445
Query: 448 AEEFCKVL 455
A + KVL
Sbjct: 446 AYRYIKVL 453
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 173/338 (51%), Gaps = 11/338 (3%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
ED L R+ L S T ++ ++ EG TV L LRK RY+HALE+ EWM
Sbjct: 73 EDDLKSRIFRLRLPKRSATNIIHNWVSEGNTVTASELRNISNELRKLQRYKHALEISEWM 132
Query: 103 ESRKMHFSYTDF--AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMT 160
+ K F DF A +DL K GI AAE+YF GL K TY ALL+ Y
Sbjct: 133 VTNK-EFELMDFDYATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAGVKQL 191
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
+A L+E++ + +N + T+Y+ +GQ EKV +V ++K++ I+ D TY +W
Sbjct: 192 GKAEELYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLW 251
Query: 221 MQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKA-ELFEKAELALKKLE 277
+ S + + +ID V R+ EM ++ C D W Y ++A+IYVKA L A+ + E
Sbjct: 252 ISSCAAILNIDQVTRILDEMKHDSGCNDD--WLRYIDIANIYVKAGHLVNTESSAVVEAE 309
Query: 278 E-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAID 335
+ + R+ Y FLI LY + D V+++W L+ T TN +++ +L + L +
Sbjct: 310 KSITQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHLK 369
Query: 336 ILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ ++W +S + +D+ ++ A+ + E A
Sbjct: 370 EAGEVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIA 407
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 178/346 (51%), Gaps = 8/346 (2%)
Query: 27 TVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSL 86
+V R A + D L R+ LG S T AL+ + EG+ L R L
Sbjct: 44 SVDDRAVAVAATGEEDGDDLRSRIFRLGLAKRSATAALDKWSGEGRAAPAAELRRIARDL 103
Query: 87 RKFGRYRHALEVIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRY 145
+ RY+HALEV +WM++ + S +D+ + +DL K G +AAE +F L AK+
Sbjct: 104 SRVRRYKHALEVADWMKTHHESDLSESDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLE 163
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y ALL+ Y + MT++A LFE+M + + + +N + T+Y+ +G+ +KV + ++
Sbjct: 164 AYTALLHSYGRSKMTDKAERLFERMKDANLSMDALVYNEMMTLYISVGELDKVEIIAEEL 223
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K++N+S D TY + + + + D++G + + EM + K WT Y NLAS+YV A
Sbjct: 224 KRQNVSPDLFTYNLRVSAAAASMDLEGFKGILDEMSKDPNSKEGWTLYRNLASVYVDASQ 283
Query: 266 FEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLV 323
+ +L + E ++ R+ Y FL+ L+ N + + +W ++ ++ T+ +Y+
Sbjct: 284 LVGSGNSLVEAEAKISQREWITYDFLVILHAGLGNQERIKDIWKSMVMTSQRMTSRNYIC 343
Query: 324 LLQALAKLNAIDILKQCFEEWE-SRCSSYDM----RLADVIIRAYL 364
++ + + + ++W+ S+ +D+ RL D ++ A L
Sbjct: 344 VISSYLMCGQLKDAGEIVDQWQRSKAPEFDISACNRLLDALLSAGL 389
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 183/382 (47%), Gaps = 5/382 (1%)
Query: 96 LEVIEWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCY 154
+E+ +WM K + D V +DL +K AE+ K Y LL Y
Sbjct: 1 MEISDWMALEKGTKWELADNIVRIDLKSKMKQFTVAEQLLENSPPEFKTELAYHTLLKNY 60
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
M ++A AL EK+ L +FN + +Y R G K+ ++ MK + D
Sbjct: 61 VDHQMAQKAGALLEKLKSTGLLTLPFSFNQMMLLYKRKGMENKLPEILEDMKAHGVPKDV 120
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
TY + M S DI+G+E++F E+ + K T+ LA+ V A L EKA++ LK
Sbjct: 121 YTYNILMDVKSRSGDIEGMEKIFEELKADENVKADAATFGTLATACVHAGLLEKAKVYLK 180
Query: 275 KLEEMKP-RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNA 333
++EE R+R AY LIS Y ++D V RVW +KS +N SY+ +++A KL
Sbjct: 181 EMEEGDIFRNRSAYDILISQYGAVGDVDGVERVWEKVKSGPIVSNRSYITVIEAFGKLGM 240
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR 393
++ ++ +E R + ++ AY ++ + ++A + ++ +K +
Sbjct: 241 VEKAEELYEVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLMDDMEKLGRKKNAI--TY 298
Query: 394 ESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAE-EFC 452
+ YL++ QLD A+ M+ AL + KQ +P T+ F E +V AE +F
Sbjct: 299 HHLVTGYLKTDQLDKAVAAMKEALVDPKQGRSKPWFETLVAVLDAFAERGNVVNAEQQFQ 358
Query: 453 KVLKSLNCLDFSAYSLLIKTYI 474
++ K+ L+ Y++L+K YI
Sbjct: 359 EIKKAYPRLNIQVYNILLKAYI 380
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 130/241 (53%), Gaps = 2/241 (0%)
Query: 25 TETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVR 84
+ T+ + +P N+D L R+ L SVT L ++ EG V L +
Sbjct: 33 SRTLRSEVLEESPNSPENDD-LKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISK 91
Query: 85 SLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN 143
LR+ RY+HALE+ EWM S + S +D AV +DL + GI AAE+YF GL AK
Sbjct: 92 ELRRAQRYKHALEISEWMVSHDEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKT 151
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY ALL+ Y + E+A L+E++ E N + +N + T+Y+ +GQ EKV +V
Sbjct: 152 SETYTALLHSYAGAKLAEKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVE 211
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
++K++ + D TY +W+ S + DIDGV R+ EM N W Y NLA+IY+ A
Sbjct: 212 ELKRQKVVPDLFTYNLWVSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMA 271
Query: 264 E 264
+
Sbjct: 272 D 272
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 200/422 (47%), Gaps = 11/422 (2%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVY 117
SV + ++ EG + K +L + LR+ RY+ A+E+ +WM E + + + D V
Sbjct: 4 SVVPLIKEWLNEGYALDKRVLVSILIRLRRRQRYKQAMEISDWMSEEKNIKWEMADNIVR 63
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+DL AK A AE+ K Y LL Y M ++A AL EK+ L
Sbjct: 64 IDLKAKMKQFAVAEQLLEDSPPEFKTELAYHTLLRNYADYQMAQKADALLEKLKGTGILT 123
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
AFN + +Y R G KV ++ MK + D TY + M + DI+G+E++F
Sbjct: 124 LPFAFNQMMLLYKRKGMMNKVTEILADMKTHGVPKDVYTYNILMDVKARSGDIEGMEKIF 183
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP-RDRKAYHFLISLYCN 296
E+ + K T+ LA+ V A L +KA LK++EE R+R AY LIS Y
Sbjct: 184 EELSADENVKADAATFGTLATFCVHAGLLDKARSYLKEMEEGDVFRNRSAYDILISQYGA 243
Query: 297 TSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
+ + V RVW +KS +N SY+ +++A KL ++ ++ + R
Sbjct: 244 VGDQEGVERVWEKVKSGPVVSNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLILSRQF 303
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKK---RANASARFFKSRESFMIYYLRSRQLDLALNEM 413
+ ++ AY ++ + E+A + + K + NA + + YL++ QLD AL M
Sbjct: 304 NSLLSAYARQGLMEKAEKLVEDMVKLGRKKNAV-----TYHHLVTGYLKTDQLDKALAVM 358
Query: 414 EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAE-EFCKVLKSLNCLDFSAYSLLIKT 472
+ A ++KQ R T+ + + E DV AE +F + K+ + Y++L+K
Sbjct: 359 KEAQGDSKQGRSRLWVETLISVLDAYAERGDVISAEKQFQDIKKAYPRPNIQVYNILLKA 418
Query: 473 YI 474
YI
Sbjct: 419 YI 420
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 169/331 (51%), Gaps = 8/331 (2%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
G +D L + L S T AL+ + EG+ L R L + RY+HALEV
Sbjct: 64 VGEDDDLRSLIFRLRLAKRSATEALDRWAGEGRAAPAPELRRVARDLSRARRYKHALEVA 123
Query: 100 EWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL 158
EWM++ + S D+ V +DL K G AAE +F L AK+ Y ALL+ Y +
Sbjct: 124 EWMKTHHESDLSENDYGVRIDLITKVFGANAAEDFFEKLPSEAKSLEAYTALLHSYARSK 183
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
MT++A LFE+M + + + +N + T+Y+ +G+ +KV + ++K++N+S D TY
Sbjct: 184 MTDKAERLFERMKDADLSIDVLVYNEMMTLYISVGELDKVPAVAEELKRQNVSPDLFTYN 243
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE- 277
+ + + + D++ + + EM + WT Y NLA+IYV A + +L + E
Sbjct: 244 LRISASAASMDLEIFKGILDEMSKDPNSNEGWTLYRNLATIYVNASQLVSSGNSLVEAEA 303
Query: 278 EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDI 336
++ R+ Y FLI L+ NL+ V +W ++ T T+ +Y+ +L + +
Sbjct: 304 KISQREWITYDFLILLHTGLGNLERVKDIWKSMQMTSQRMTSRNYICVLSSYLMCGQLKD 363
Query: 337 LKQCFEEWE-SRCSSYDM----RLADVIIRA 362
K+ ++W+ S+ +D+ RL D ++ A
Sbjct: 364 AKEIVDQWQRSKAPEFDISACNRLFDALLGA 394
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 144/255 (56%), Gaps = 4/255 (1%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
D L +RL L S L + EG+TV+K L VR LRK+ R++HALE+ EWM
Sbjct: 28 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 87
Query: 104 SR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
++ +M D AV+LDL AK G+ +AEK+F + E AK T ALL+ Y + ++
Sbjct: 88 TQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDK 147
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A A+ E+M + +L + FN++ ++Y+ G+ EKV ++ ++++ I D +TY +W+
Sbjct: 148 AEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLT 206
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR 282
S N + E+V Y++ + W T+S L SIY+ A L K AL ++E+ R
Sbjct: 207 YCSKKNSVKAAEKV-YDLMKDERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASR 265
Query: 283 -DRKAYHFLISLYCN 296
+R AY L++LY +
Sbjct: 266 KERAAYSSLLTLYAS 280
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 159/295 (53%), Gaps = 7/295 (2%)
Query: 2 MIRNQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVT 61
++ +RL S + L + T T SQ+ N ++LY+R+S +G S+
Sbjct: 9 VLNTDTRLGSRNELMGSSLFYSTTPTSSQKWFRERG--KDNLNQLYRRISPVGDPKVSIV 66
Query: 62 GALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYT--DFAVYLD 119
L+ +I EGK+V KD L+ ++ LR RY HALE+ WM S K +F+ T D A+ LD
Sbjct: 67 PILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEISMWM-SDKRYFALTSRDVAIRLD 125
Query: 120 LTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNT 179
L +K GI AEKYF + + K Y ALLNCY ++A A+ + M +L F G T
Sbjct: 126 LMSKVLGIEQAEKYFENVPQKLKVLEVYNALLNCYAYAKSVDKAEAVMQNMRDLGFAGKT 185
Query: 180 VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
+ +N + ++ + G +K+ L+ +M++ I+ D T + + +Y+ + DI +E++
Sbjct: 186 LTYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDRFTLGIQLSAYAAICDIQRMEKIMSR 245
Query: 240 MCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK--AYHFLIS 292
M ++ W Y+ +A+ Y KA L +KA LKK E + ++ AY+FL++
Sbjct: 246 MESDANVVTDWCNYAIVANGYRKAGLMDKALEMLKKSEGLITGKKRSSAYNFLLT 300
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 166/336 (49%), Gaps = 4/336 (1%)
Query: 41 GNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIE 100
G+ED L R+ L S T AL + EG+ L R L + GRY+HALEV E
Sbjct: 73 GDEDDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAE 132
Query: 101 WMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
WM++ + S D+ + +DL + G AAE +F L ++ Y ALL+ Y + M
Sbjct: 133 WMKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKM 192
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
T++A LF++M + N + +N + T+Y+ +G+ +KV + ++K++ S D TY +
Sbjct: 193 TDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNL 252
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA-ELFEKAELALKKLEE 278
+ + + D++G + + EM + W Y NLA IYV A +L ++ +
Sbjct: 253 RISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAK 312
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
+ R+ Y FL+ L+ N D + +W +L ++ T+ +Y+ +L + +
Sbjct: 313 ISQREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDA 372
Query: 338 KQCFEEWE-SRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ ++W+ S+ +D+ + + A+L + A
Sbjct: 373 GEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTA 408
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 169/328 (51%), Gaps = 15/328 (4%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
+D L R+ L S T L +I EG + + L + LR+ RY+HALE
Sbjct: 54 KDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALE----H 109
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER 162
E K+ S D+A +DL +K GI AAE+YF GL +K TY +LL+ Y TER
Sbjct: 110 EESKI--SDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTER 167
Query: 163 ALALFEKM---DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
A ALF+++ D L F + +N + T+Y+ +GQ EKV ++ +KQ+ +S D TY +
Sbjct: 168 AEALFKRIIESDSLTF--GAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNL 225
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE--LALKKLE 277
W+ S + +ID + ++ EM ++ W Y +L SIY+ + AE L ++ +
Sbjct: 226 WLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEK 285
Query: 278 EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDI 336
+ R+ Y FL+ L+ N ++++W L++T ++ SY+ +L + L +
Sbjct: 286 SISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLRE 345
Query: 337 LKQCFEEW-ESRCSSYDMRLADVIIRAY 363
++ +W ES+ + +D I+ A+
Sbjct: 346 AEEIIHQWKESKTTEFDASACLRILNAF 373
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 166/336 (49%), Gaps = 4/336 (1%)
Query: 41 GNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIE 100
G+ED L R+ L S T AL + EG+ L R L + GRY+HALEV E
Sbjct: 73 GDEDDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAE 132
Query: 101 WMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
WM++ + S D+ + +DL + G AAE +F L ++ Y ALL+ Y + M
Sbjct: 133 WMKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKM 192
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
T++A LF++M + N + +N + T+Y+ +G+ +KV + ++K++ S D TY +
Sbjct: 193 TDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNL 252
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA-ELFEKAELALKKLEE 278
+ + + D++G + + EM + W Y NLA IYV A +L ++ +
Sbjct: 253 RISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAK 312
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
+ R+ Y FL+ L+ N D + +W +L ++ T+ +Y+ +L + +
Sbjct: 313 ISRREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDA 372
Query: 338 KQCFEEWE-SRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ ++W+ S+ +D+ + + A+L + A
Sbjct: 373 GEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTA 408
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 166/336 (49%), Gaps = 4/336 (1%)
Query: 41 GNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIE 100
G+ED L R+ L S T AL + EG+ L R L + GRY+HALEV E
Sbjct: 114 GDEDDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAE 173
Query: 101 WMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
WM++ + S D+ + +DL + G AAE +F L ++ Y ALL+ Y + M
Sbjct: 174 WMKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKM 233
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
T++A LF++M + N + +N + T+Y+ +G+ +KV + ++K++ S D TY +
Sbjct: 234 TDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNL 293
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA-ELFEKAELALKKLEE 278
+ + + D++G + + EM + W Y NLA IYV A +L ++ +
Sbjct: 294 RISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAK 353
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
+ R+ Y FL+ L+ N D + +W +L ++ T+ +Y+ +L + +
Sbjct: 354 ISRREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDA 413
Query: 338 KQCFEEWE-SRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ ++W+ S+ +D+ + + A+L + A
Sbjct: 414 GEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTA 449
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K+ EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K+ EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K+ EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K+ EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K+ EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 157/312 (50%), Gaps = 8/312 (2%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVY 117
S T AL + EG+ L R L + RY+HALEV EWM++ + S D+ V
Sbjct: 80 SATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVR 139
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+DL K G AAE +F L AK+ Y ALL+ Y + M ++A LF++M +
Sbjct: 140 IDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPI 199
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ + +N + T+Y+ +G+ +KV L ++K++N+S D TY + + + D++ + +
Sbjct: 200 DVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGIL 259
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCN 296
EM + W Y NLASIYV A + +L + E ++ R+ Y L+ L+
Sbjct: 260 DEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQREWITYDLLVILHAG 319
Query: 297 TSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEEWE-SRCSSYDM- 353
NLD V +W ++ T T+ +Y+ +L A + + ++W+ S+ +D+
Sbjct: 320 LGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAEVVDQWQRSKVPEFDVS 379
Query: 354 ---RLADVIIRA 362
RL D ++ A
Sbjct: 380 ACNRLFDALLAA 391
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEDL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGKLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 172/359 (47%), Gaps = 21/359 (5%)
Query: 25 TETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVR 84
+ V R+ A T G D L R+ LG S T AL + EG+ L R
Sbjct: 37 STAVGDRVVAATGEHDG--DDLRSRIFRLGLAKRSATAALEKWSSEGRDAPTAELRRIAR 94
Query: 85 SLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN 143
L + RY+HALEV +WM++ + S D+ + +DL K G +AAE +F L AK+
Sbjct: 95 DLTRVRRYKHALEVADWMKTHHESDLSENDYGMRIDLITKVFGASAAEDFFEKLPPGAKS 154
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
Y ALL+ Y + MT+RA LFE+M + + + +N + T+Y+ +G+ KV +
Sbjct: 155 LEAYTALLHSYGRSKMTDRAERLFERMKDASLPMDALVYNEMMTLYISVGELGKVEAVAE 214
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR--WTTYSNLASIYV 261
++K++N+S D TY + + + D++G V EM + + W Y +LAS+YV
Sbjct: 215 ELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVLDEMSRDPKSSTEGGWALYRDLASVYV 274
Query: 262 KA-ELFEKAELALKKLEEMKPRDRK--AYHFLISLYCNTSNLDAVNRVWGILKSTFPP-- 316
A +L + E + R+ Y FL+ L+ + + +W + +T
Sbjct: 275 DAGQLLGSVNSPPVEAGEARISQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQS 334
Query: 317 ------TNTSYLVLLQALAKLNAIDILKQCFEEWE-SRCSSYDM----RLADVIIRAYL 364
T+ +Y+ ++ + ++ + ++W+ S+ +D+ RL D ++RA L
Sbjct: 335 QQQQRMTSRNYVCVVSSYLACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGL 393
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 156/312 (50%), Gaps = 8/312 (2%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVY 117
S T AL + EG+ L R L + RY+HALEV EWM++ + S D+ V
Sbjct: 80 SATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVR 139
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+DL K G AAE +F L AK+ Y ALL+ Y + M ++A LF++M +
Sbjct: 140 IDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPI 199
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ + +N + T+Y+ +G+ +KV L ++K++N+S D TY + + + D++ + +
Sbjct: 200 DVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGIL 259
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCN 296
EM + W Y NLASIYV A + +L + E ++ R+ Y L+ L+
Sbjct: 260 DEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEAKISQREWITYDLLVILHAG 319
Query: 297 TSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEEWE-SRCSSYDM- 353
NLD V +W ++ T T+ +Y+ +L A + ++W+ S+ +D+
Sbjct: 320 LGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAGVVDQWQRSKVPEFDVS 379
Query: 354 ---RLADVIIRA 362
RL D ++ A
Sbjct: 380 ACNRLFDALLAA 391
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 171/359 (47%), Gaps = 21/359 (5%)
Query: 25 TETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVR 84
+ V R+ A T G D L R+ LG S T AL + EG+ L R
Sbjct: 37 STAVGDRVVAATGEHDG--DDLRSRIFRLGLAKRSATAALEKWSSEGRDAPAAELRRIAR 94
Query: 85 SLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN 143
L + RY+HALEV +WM++ + S D+ + +DL K G +AAE +F L AK+
Sbjct: 95 DLTRVRRYKHALEVADWMKTHHESDLSENDYGMRIDLITKVFGASAAEDFFEKLPAGAKS 154
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
Y ALL+ Y + MT+RA LFE+M + + +N + T+Y+ +G+ KV +
Sbjct: 155 LEAYTALLHSYGRSKMTDRAERLFERMKGASLPMDALVYNEMMTLYISVGELGKVEAVAE 214
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR--WTTYSNLASIYV 261
++K++N+S D TY + + + D++G V EM + + W Y +LAS+YV
Sbjct: 215 ELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVLDEMSRDLKSSTEGGWALYRDLASVYV 274
Query: 262 KA-ELFEKAELALKKLEEMKPRDRK--AYHFLISLYCNTSNLDAVNRVWGILKSTFPP-- 316
A +L + E + R+ Y FL+ L+ + + +W + +T
Sbjct: 275 DAGQLLGSVNSPPVEAGEARISQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQS 334
Query: 317 ------TNTSYLVLLQALAKLNAIDILKQCFEEWE-SRCSSYDM----RLADVIIRAYL 364
T+ +Y+ ++ + ++ + ++W+ S+ +D+ RL D ++RA L
Sbjct: 335 QSQQRMTSRNYVCVVSSYLACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGL 393
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K +KAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLDKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 124/219 (56%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ I LD+ +Y +W+ + + +E+VF EM + WTT+S +A++Y
Sbjct: 66 VSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTMAAMYS 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+LISLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + ++V L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + ++V L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + ++V L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS FP N
Sbjct: 126 KLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|449457725|ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 125/218 (57%), Gaps = 1/218 (0%)
Query: 24 PTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCV 83
P ++ R + T +D LY+R+S +G SVT L+ +++EG+ V++D L + +
Sbjct: 9 PINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHII 68
Query: 84 RSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ LR + R++HALE+ +WM + R S D A+ ++L + +G+ E YF+ + K
Sbjct: 69 KELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLK 128
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ ALLNCY E ++A A +K+ E+ F + + +N + +Y ++G+ E++ L+
Sbjct: 129 RYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLL 188
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+MK+R + D TY + + +Y+ +D G+E++ +M
Sbjct: 189 KEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQM 226
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 124/219 (56%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS F N
Sbjct: 126 KLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFTNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 124/219 (56%), Gaps = 2/219 (0%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ YGALLN Y + ++A L E+M + + +N + T+Y++L + +KV L
Sbjct: 6 KDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEEL 65
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
V++MKQ+ ISLD+ +Y +W+ + + +E+VF EM + WTT+S +AS+Y
Sbjct: 66 VSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYA 125
Query: 262 KAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNT 319
K EKAE L+ LE + RDR YH+L+SLY + N V RVW I KS F N
Sbjct: 126 KLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFTNIPNW 185
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
Y ++ +L + I+ ++ +EEW SS+D ++ ++
Sbjct: 186 GYHSVISSLVRSGDIEGAEKLYEEWLPVKSSFDPKIGNL 224
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 35 PTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRH 94
P+P ED L++R+ G S+ L+ ++ EG+ V + L+ ++ LR FGR+ H
Sbjct: 30 PSP---STEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNH 86
Query: 95 ALEVIEWMES-RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNC 153
AL++ EW + R S A+ L L +K G+ AE+YF+ + E +++ YGALL+C
Sbjct: 87 ALQLCEWERNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHC 146
Query: 154 YCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
Y + ++A A+ +KM E+ F+ +++N + +Y +LG+ EK+ LV +M++ I +
Sbjct: 147 YVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHN 206
Query: 214 NLTYIVWMQSYSHLNDIDGVERVFYEM 240
TY V M +Y+ +DI +E++ +M
Sbjct: 207 RFTYNVRMNAYAAASDITNMEKLLSKM 233
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 163/340 (47%), Gaps = 9/340 (2%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR 105
L R++ + L + +G V + ++ LR + AL+V EWM
Sbjct: 30 LNHRITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKE 89
Query: 106 KM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE-RA 163
K+ + DFA L L G+ AEK+F + + A++ Y LLN Y + T +A
Sbjct: 90 KICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARDDSVYTTLLNWYARSDKTLCKA 149
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
A F+KM EL L +N + ++Y+ L EKV L+ +MK ++ D++T ++
Sbjct: 150 EATFQKMRELGLLSRPSPYNAMMSLYIALNDREKVEELLREMKDNDVEADSITVNNVLKL 209
Query: 224 YSHLNDIDGVERVF--YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP 281
YS + D+ +E+ +E N K W T ++A Y++A KA L+ EE+
Sbjct: 210 YSAVCDVTAMEKFLNKWEGINGI--KLEWLTTLDMAKAYLRARSNGKAIKMLRLTEELAD 267
Query: 282 RD--RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILK 338
R + AY L+ LY N + V R+W + K N Y ++++L K++ I +
Sbjct: 268 RKSLKSAYDHLMKLYGEAGNREEVLRIWNLYKMNIGQRDNKGYRTVIRSLLKVDDIFGAE 327
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+ ++ WES +D+R+ ++ Y ++ M E+A + N+
Sbjct: 328 EIYKVWESLSLEFDIRIPTMLASGYRERGMTEKAEKLINS 367
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYT-DFAVYLDLTAKTNGIAA 129
G ++ L+ +++LR ++ AL+V EWM +++ Y+ D+A L LT G+
Sbjct: 387 GDQMKPSDLKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAARLYLTENVLGLEK 446
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCK 156
AEKYF + E K+ Y ALL+ Y K
Sbjct: 447 AEKYFENIPENMKDYSVYVALLSSYAK 473
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 5/326 (1%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAV 116
+ L + +G V + ++ LR + AL+V EWM K+ + DFA
Sbjct: 50 AQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAA 109
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE-RALALFEKMDELKF 175
L L G+ AEK+F + + A+ Y +LLN Y + T +A A F+KM +L
Sbjct: 110 RLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGL 169
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
L V +N + ++Y L EKV L+ +MK ++ DN+T ++ YS + D+ +E+
Sbjct: 170 LLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEK 229
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD--RKAYHFLISL 293
+ K W T ++A Y++A KA L+ E++ + + AY L+ L
Sbjct: 230 FLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKL 289
Query: 294 YCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
Y N + V RVW + KS N Y ++++L K++ I ++ ++ WES +D
Sbjct: 290 YGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFD 349
Query: 353 MRLADVIIRAYLQKDMYEEAALIFNN 378
R+ ++ Y + M E+A + N+
Sbjct: 350 HRIPTMLASGYRDRGMTEKAEKLMNS 375
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 34/200 (17%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAA 129
G ++ L+ +++LR ++ AL+V EWM +++ + D+A L LT G+
Sbjct: 395 GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEE 454
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
AEKYF + E K+ Y ALL+ Y K K LGN V
Sbjct: 455 AEKYFENIPENMKDYSVYVALLSSYAK---------------SDKNLGNMVD-------- 491
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR 249
++ +M++ N+ D +T ++ Y+ + I +E E K
Sbjct: 492 ----------EILREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFMRRWGTEDGIKLE 541
Query: 250 WTTYSNLASIYVKAELFEKA 269
T +A YVKA L +K+
Sbjct: 542 RGTMIAMAKAYVKAGLTKKS 561
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 161/320 (50%), Gaps = 15/320 (4%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV-- 116
S++ L+ + EGK + M+ + L+ R HALE+IEW+ Y DF +
Sbjct: 164 SMSSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWVVDEP---DYKDFKLAR 220
Query: 117 --YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELK 174
L++TA++ GIAAAEK F LS K R Y ALL Y ++A LFE+MD+
Sbjct: 221 SFQLEITARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAG 280
Query: 175 FLGNT-VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
FL + A N + +Y G K + ++ + K + + TY V + + D++G+
Sbjct: 281 FLSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGM 340
Query: 234 ERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP--RDRKAYHFLI 291
E++F EM K T+Y L Y+KA L +KAE++L ++ E+ P R + + +++
Sbjct: 341 EKIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRM-EVGPFRRTKATFEYMM 399
Query: 292 SLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALA---KLNAIDILKQCFEEWESRC 348
Y + V R+W K S+L +A+A ++ +D + + ++W+ R
Sbjct: 400 LAYGQLGLISDVERMWQKCKMVPGDGFNSFLAFQRAMALAGEVQRVDSMFKHMDKWK-RS 458
Query: 349 SSYDMRLADVIIRAYLQKDM 368
+ D++ + ++ AY +K M
Sbjct: 459 KTVDLKRHNNLLLAYYKKGM 478
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 5/326 (1%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAV 116
+ L + +G V + ++ LR + AL+V EWM K+ + DFA
Sbjct: 50 AQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAA 109
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE-RALALFEKMDELKF 175
L L G+ AEK+F + + A+ Y +LLN Y + T +A A F+KM +L
Sbjct: 110 RLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGL 169
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
L V +N + ++Y L EKV L+ +MK ++ DN+T ++ YS + D+ +E+
Sbjct: 170 LLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEK 229
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD--RKAYHFLISL 293
+ K W T ++A Y++A KA L+ E++ + + AY L+ L
Sbjct: 230 FLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKL 289
Query: 294 YCNTSNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
Y N + V RVW + KS N Y ++++L K++ I ++ ++ WES +D
Sbjct: 290 YGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFD 349
Query: 353 MRLADVIIRAYLQKDMYEEAALIFNN 378
R+ ++ Y + M E+A + N+
Sbjct: 350 HRIPTMLASGYRDRGMTEKAEKLMNS 375
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAA 129
G ++ L+ +++LR ++ AL+V EWM +++ + D+A L LT G+
Sbjct: 395 GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEE 454
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCK 156
AEKYF + E K+ Y ALL+ Y K
Sbjct: 455 AEKYFENIPENMKDYSVYVALLSSYAK 481
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 161/334 (48%), Gaps = 11/334 (3%)
Query: 46 LYKRLSALGATGGSVTGALNAYIME---GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
L R+ A +T L + + GK + ++ V +LR R R ALEV WM
Sbjct: 24 LQSRIEAALEKKAEITTVLEQWRQQQEQGKQLNPSLVRGVVENLRDSQRCREALEVSNWM 83
Query: 103 ESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
+K+ + DF L G+ A + + E +N Y +LL+ Y + +
Sbjct: 84 IVQKICNLIPEDFTTRFHLIENVFGLEEAGNFVESIPENLRNESIYNSLLSSYVRRNDLD 143
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRL--GQPEKVRPLVNQMKQRNISLDNLTYIV 219
+A + F+KM EL L +N+++++Y R+ G KV ++ +MK+ NI LD T
Sbjct: 144 KAESTFKKMRELGLLLRASPYNSMTSLYRRIPHGNRCKVDEILREMKESNIKLDRDTVNN 203
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM 279
++ Y+ + I +E+ E E W T ++A Y+++ KA+ L++ EE+
Sbjct: 204 ALRVYADVTHIATMEKFLAEW--EGNTPLDWLTRLDMAKAYLRSGFKGKAKEMLRRTEEL 261
Query: 280 KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQ 339
RD K+Y L+ LY V RVW + K N + L+ +L KL+ I+ ++
Sbjct: 262 --RDPKSYEELMRLYGEAGGRKDVYRVWDLYKKLSKKDNEGFRALIGSLLKLDDINGAEE 319
Query: 340 C-FEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
++EWE +D+R+ +++ +Y +K M E+A
Sbjct: 320 FYYKEWECSGLPFDVRIPTMLVSSYREKGMVEKA 353
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 165/344 (47%), Gaps = 13/344 (3%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
DKL K + + +T L + +G V+ L +++L ++ ALE +WM
Sbjct: 354 DKLIKEIMKNEESVKPITPLLESLERKGNVVKPSELRDLIKNLCDSNQFYKALEASKWM- 412
Query: 104 SRKMHFSY--TDFAVYLDLTAKTNGIAAAEKYFN-GLSEYAKNRYTYGALLNCYCKELMT 160
S K F+ D+A L + G AEK+F + E K+ Y YG LL+CY K T
Sbjct: 413 STKTSFNLFPQDYAARLHMIENVLGFEEAEKFFERSIPENMKDDYVYGTLLSCYAKSHKT 472
Query: 161 -ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
++A A+FEKM +L FL FN++ ++Y +LG+ EKV L+++MK NI D+LT
Sbjct: 473 LDKAEAIFEKMGDLGFLSKPSPFNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMNN 532
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM 279
++ Y+ DI +++ E N T + ++ A +E+A L LK +E
Sbjct: 533 VLRMYADETDIKTMDKYKREWIN-----AEKNTKLEMRTMVAMANAYERAGLLLKAIE-- 585
Query: 280 KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQ 339
R + H L + Y + + K + Y ++ +L KL+ + ++
Sbjct: 586 ITRSKNEVHRLWNEYKEKEKRNYKIDDANLCKCRSAVGDEEYQSVISSLLKLDDLKGAEE 645
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQK-DMYEEAALIFNNAKKR 382
+ EWE ++ R+ +II Y ++ D + +++++ KKR
Sbjct: 646 IYGEWEPEGPEFNTRIPCLIISRYCKEGDEVKVREVVYSSIKKR 689
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 15/296 (5%)
Query: 167 FEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSH 226
+KM E+ F+ +++N + +Y LG+ EK+ L+ +M++ I D TY + M +Y+
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 227 LNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK- 285
+DI +E++ +M + W TY + + Y KA L E + L LKK E+ +K
Sbjct: 61 ASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDKQKW 120
Query: 286 -AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
AY +L++LY N D V RVW + + N+ YL ++ +L KL+ ID ++ +EW
Sbjct: 121 LAYQYLMTLYAAIGNKDEVYRVWNLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEW 180
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAA-----LIFNNAKKRANASARFFKSRESFMIY 399
ES +S+D R+ +++I +Y K ++A LI + AN S +
Sbjct: 181 ESGDTSFDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHSNGLT 240
Query: 400 YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL 455
+ L A++ HW+P + + + ++VD AEE +L
Sbjct: 241 NKVAETLKKAIS--------VSPPHWKPKYHILAACLEYLKTNENVDLAEEIIGLL 288
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 211/444 (47%), Gaps = 31/444 (6%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSY 111
+ TG ++ AL ++ +GK + ++ + + +LR+ Y AL++ EW+ES+K + F
Sbjct: 165 MNGTGPTIYTALEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVE 224
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKM 170
D+A LDL AK +G+ AE Y + E + Y LL NC + + ++A +F KM
Sbjct: 225 RDYASQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNL-KKAEEIFNKM 283
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
+L+F A N L +Y R + +K+ ++ M+Q N+ LT+ + + NDI
Sbjct: 284 KDLEFPLTPFACNQLLLLYKRTDK-KKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDI 342
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHF 289
DG++++ +M E + +T + L Y+ +KA++ LK++E E +R
Sbjct: 343 DGMDQIVDQMRAEGIEPDNYTK-AVLVGHYISGGHDDKAKMLLKEMEGENLKENRWVCRL 401
Query: 290 LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE----EWE 345
L++LY D V RVW + ++ P+ + ++A KL ID + FE +W+
Sbjct: 402 LLALYAKLGMADEVGRVWKVCETR--PSVEDCVAAIEAWGKLKKIDEAEAVFEVMARKWK 459
Query: 346 ---SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK-SRESFMIYYL 401
CS V++ Y M + + K+ A+ R + + + Y+
Sbjct: 460 LTSKNCS--------VLLNVYANNKMLTKGKDLI---KRMAHKGCRIGPLTWNALVKLYV 508
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
++ +++ A + ++ A+ +Q RP+ + +T + + D+ +E+ +K +
Sbjct: 509 QAGEVEKADSVLQKAI---QQSPVRPIFSSYNTLLEEYSKRGDIHNSEKIFYRMKQAGYI 565
Query: 462 D-FSAYSLLIKTYIAAGKLASDMR 484
Y +LI+ Y A A +R
Sbjct: 566 SRLKQYQILIEAYRRANVPAYGIR 589
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 154/316 (48%), Gaps = 26/316 (8%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYL 118
S++ L+ + EGK + M+ + L+ R HALE+IEW
Sbjct: 164 SMSSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEW----------------- 206
Query: 119 DLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
+TA++ GIAAAEK F LS K R Y ALL Y ++A LFE+MD+ FL
Sbjct: 207 -ITARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGFLSQ 265
Query: 179 T-VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ A N + +Y G K + ++ + K + + TY V + + D++G+E++F
Sbjct: 266 SPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEKIF 325
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP--RDRKAYHFLISLYC 295
EM K T+Y L Y+KA L +KAE++L ++ E+ P R + + +++ Y
Sbjct: 326 EEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRM-EVGPFRRTKATFEYMMLAYG 384
Query: 296 NTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALA---KLNAIDILKQCFEEWESRCSSYD 352
+ V R+W K S+L +A+A ++ +D + + ++W+ R + D
Sbjct: 385 QLGLISDVERMWQKCKMVPGDGFNSFLAFQRAMALAGEVQRVDSMFKHMDKWK-RSKTVD 443
Query: 353 MRLADVIIRAYLQKDM 368
++ + ++ AY +K M
Sbjct: 444 LKRHNNLLLAYYKKGM 459
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 223/477 (46%), Gaps = 36/477 (7%)
Query: 24 PTETVSQRIAAPTPFPTGN---EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLE 80
P + + A PT + + +L+K ++ A G SV ALN ++ GK + + +
Sbjct: 121 PVDEMDLSDADPTKKKSQGRRTQSELFKAIA--NAPGLSVDSALNKWVEHGKELSRKEIL 178
Query: 81 YCVRSLRKFGRYRHALEVIEWMES-RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
VR LR+ Y A ++ +W+ES +K+ F +D+A LDL AK G+ AEKY + E
Sbjct: 179 LAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDYASQLDLIAKLRGLPKAEKYIESVPE 238
Query: 140 YAKNRYTYGALL-NCYCKE--LMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+ Y LL NC + + TE+ +F KM +L A N L +Y +L +
Sbjct: 239 SFRGELLYRTLLANCASQNNLIATEK---IFNKMKDLDLPLTAFACNQLLLLYKKL-DKK 294
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC-EDKCRWTTYSN 255
K+ ++ M++ N+ TY + + S NDI G+E+VF M E E +
Sbjct: 295 KIADVLLLMEKENVKPSLFTYRILIDSKGQSNDIAGMEQVFETMKEEGFEPDIQIQAL-- 352
Query: 256 LASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF 314
LA Y + L EKAE LK++E E ++ L+ LY N D V R+W + +S
Sbjct: 353 LARHYTSSGLKEKAEAMLKEMEGENLKENQWVCATLLRLYANLGKADEVERIWKVCESK- 411
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFE----EWESRCSSYDMRLADVIIRAYLQKDMYE 370
P L ++A KLN I+ + FE +W+ +Y V+++ Y M
Sbjct: 412 -PRVEDCLAAVEAWGKLNKIEEAEAVFEMVSKKWKLNSKNY-----SVLLKIYANNKMLT 465
Query: 371 EAALIFNNAKKRANASARFFK-SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQ 429
+ + K A++ R + ++ + Y+++ +++ A + + A+ +Q +PM
Sbjct: 466 KGKELV---KLMADSGVRIGPLTWDALVKLYIQAGEVEKADSILHKAI---QQNQLQPMF 519
Query: 430 VTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
T + + DV +E+ F K+ ++ S + +LI+ Y+ A A +R+
Sbjct: 520 TTYLAILEQYAKRGDVHNSEKIFLKMRQAGYTSRISQFQVLIQAYVNAKVPAYGIRE 576
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 197/442 (44%), Gaps = 70/442 (15%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIM-EGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
D L++R++A ++ L + + E + + K ++ ++ L + R+ AL++ WM
Sbjct: 82 DSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWM 141
Query: 103 ESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R +H S D A L+L K +G+ A +YF+ + + K + YG+LL CY + E
Sbjct: 142 TERLHLHLSPGDVANRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVE 201
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+A LFEKM + + ++ A+N + +YL+ GQ E+ V+ M Q M
Sbjct: 202 KAEELFEKMRGMG-MASSYAYNVMMRLYLQNGQVER----VHSMHQA------------M 244
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP 281
+ + D+ TT++ +A +
Sbjct: 245 EESGIVPDVS-------------------TTHTLVAVL---------------------- 263
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
R +K L++ Y ++ A+ V S N+ Y+ + L K+N + ++ +
Sbjct: 264 RKKKT---LVAAYVVAEDIKAIENVLEKANSC----NSMYMCRIGVLLKMNDMVGAEKAY 316
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYL 401
EEWES+ +D RL ++++ AY ++ + ++A + + K+ F + Y
Sbjct: 317 EEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMP--FANTCYKLAGGYF 374
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+ Q+ A + + AL+ A W P V +F E+K+V+ AEE +L+ L
Sbjct: 375 KVGQVSKAADLTKKALASASN-EWIPDLTNVLMSLNYFAEQKNVEAAEEMASLLQRLITP 433
Query: 462 DFSAYSLLIKTYIAAGKLASDM 483
Y L+KTY+ AGK SD+
Sbjct: 434 TRDIYHGLLKTYVNAGKPVSDL 455
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 215/453 (47%), Gaps = 33/453 (7%)
Query: 45 KLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES 104
KL+K + L A G SV AL+ + +GK + + + VR LR+ Y A ++ +W+ES
Sbjct: 136 KLFKVI--LNAPGLSVDSALSKWAGQGKELSRKEIFLAVRELRRRKMYGRAFQLFQWLES 193
Query: 105 -RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKE--LMT 160
+K+ F +D+A LDL AK G+ AEKY + E + Y LL NC + + +
Sbjct: 194 NKKLEFMESDYASQLDLIAKLRGLPQAEKYIESVPESFRGELLYRTLLANCASQNNLIAS 253
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
E+ +F KM +L L TV N + + +K+ ++ M++ N+ TY +
Sbjct: 254 EK---IFNKMKDLD-LPLTVFACNQLLLLYKKLDKKKIADVLLLMEKENVKPSLFTYRIL 309
Query: 221 MQSYSHLNDIDGVERVFYEMCNEC-EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM 279
+ S H NDI G+E+VF M E E + LA Y A L EKAE LK++E
Sbjct: 310 IDSKGHSNDIAGMEQVFETMKEEGFEPDIQLQAL--LARHYTSAGLKEKAEAILKEIEGE 367
Query: 280 KPRDRK-AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILK 338
+++ L+ LY N D V R+W + +S P L ++A KL I+ +
Sbjct: 368 NLEEKQWVCATLLRLYANLGKADEVERIWKVCESK--PRVDDCLAAVEAWGKLEKIEEAE 425
Query: 339 QCFE----EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK-SR 393
FE +W+ +Y ++++ Y M + + K+ A++ R +
Sbjct: 426 AVFEMASKKWKLNSKNY-----SILLKIYANNKMLAKGKDLI---KRMADSGLRIGPLTW 477
Query: 394 ESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FC 452
+ + Y+++ +++ A + ++ A+ +Q +PM T + + DV +E+ F
Sbjct: 478 NALVKLYIQAGEVEKADSVLQKAI---QQSQLQPMFTTYLDILEQYAKRGDVHNSEKIFL 534
Query: 453 KVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
K+ ++ S + +L++ Y+ A A +R+
Sbjct: 535 KMRQAGYTSRISQFKVLMQAYVNAKVPAYGIRE 567
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 191/434 (44%), Gaps = 20/434 (4%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME-SRKMHFSYTDFAVY 117
SVT AL+ ++ EG + +D + + LRK + AL+ EW+E S ++ F+ D+A +
Sbjct: 155 SVTSALDKWVSEGHELSRDDISSTMFGLRKRRMFGKALQFSEWLEASGQLEFNEADYASH 214
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
LDL AK G+ AE Y + + Y LL Y ++A +F +M +L+F
Sbjct: 215 LDLIAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFNRMKDLEFPM 274
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
T A++ + +Y R+ + ++ +++ M++ N+ TY + + + NDI G+E+V
Sbjct: 275 TTFAYDQMLILYKRIDR-RRIADILSLMEKENVKPRPFTYKILIDAKGLSNDISGMEQVV 333
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCN 296
M E K T LA YV L +KA LK EE+ + R +L+ LY
Sbjct: 334 DTMKAEG-IKLDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSKGSRWPCRYLLPLYGE 392
Query: 297 TSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
D V R+W I + P + + A KL I ++ F+ +
Sbjct: 393 LQMEDEVRRLWEICEPN--PNVEECMAAIVAWGKLKNIQEAEKIFDRVVKTWKRLSTKHY 450
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA 416
+I+ Y M + + N K R MI+ + L + E+E A
Sbjct: 451 STMIKVYGDSKMLTKGKELVNQMAKSG--------CRIDPMIWDAVVK-LYVEAGEVEKA 501
Query: 417 LS----EAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIK 471
S KQ+ +P+ + T + + DV +E+ F K+ +S F + L++
Sbjct: 502 DSFLFKAVKQYGMKPLFDSYRTLMVHYARKGDVHNSEKIFHKIRQSGYPTHFGQFVTLVQ 561
Query: 472 TYIAAGKLASDMRQ 485
Y+ A A MR+
Sbjct: 562 AYLNAKTPAYGMRE 575
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 200/462 (43%), Gaps = 58/462 (12%)
Query: 41 GNEDKLYKRLSALGATGGSVTGALNAYIMEGK----TVRKDMLEYCVRSLRKFGRYRHAL 96
G L R+ + ++T L + + K + +++ V L RYR AL
Sbjct: 36 GTNQTLLSRIESAADQKAAITTVLEEWRQQQKHGNHQLNPSLVKGIVEKLHDSKRYRQAL 95
Query: 97 EVIEWMESRKM--HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCY 154
EV WM +K+ H D AV L G+ AEK+F + E K Y +LL Y
Sbjct: 96 EVSNWMIEKKICNHLP-EDLAVRFHLIENVLGLEEAEKFFQSIPENLKGESIYTSLLKSY 154
Query: 155 CK--ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
K E+ +A FEKM +L L +N++ ++Y L KV ++ +MK+ N+ L
Sbjct: 155 AKSGEISLRKAEYTFEKMRKLGMLLRPSPYNSMVSLYSSLRNRNKVDEILREMKENNLEL 214
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
D+ T ++ Y+ + D+ +++ + W + L E E+A
Sbjct: 215 DSPTVNNALRVYAAVCDVATMDKFLAD----------WNAITTL-------EWLTTLEMA 257
Query: 273 LKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLN 332
KAY LI LY + V R+W + K+T N + L+ +L KL+
Sbjct: 258 ------------KAYR-LIRLYGEAGEREDVYRIWDLYKNTKEKDNEGFRALIGSLLKLD 304
Query: 333 AIDILKQC-FEEWESRCSSYDMRLADVIIRAYLQKDMYEEA-ALIFNNAK-KRANASARF 389
I+ ++ ++EWES +D+R+ +++ Y K M ++A L++ K KR S
Sbjct: 305 DINGAEKIYYDEWESSGLEFDLRIPTMLMSGYRAKGMVKKADKLLYKTMKNKRLVISINP 364
Query: 390 F-----KSRESF-------MIYYLR-SRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
F K+R +I LR S QL AL E + E + F+ P + F
Sbjct: 365 FVEELVKNRNQVKPSDLRDLIKNLRDSNQLSKAL-EASTWMCEKRGFNLFPEDYAIR--F 421
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGK 478
E+ ++ AE+F + N D+S Y L+ +Y + K
Sbjct: 422 HLIEKVLGLEEAEKFFESSIPKNMKDYSVYDTLLTSYTRSDK 463
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 74 VRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEK 132
V+ L +++LR + ALE WM E R + D+A+ L K G+ AEK
Sbjct: 376 VKPSDLRDLIKNLRDSNQLSKALEASTWMCEKRGFNLFPEDYAIRFHLIEKVLGLEEAEK 435
Query: 133 YF-NGLSEYAKNRYTYGALLNCYCKELMT-ERALALFEKMDELKFLGNTVAFNNLSTMYL 190
+F + + + K+ Y LL Y + T +A +FEKM EL FL FN++ ++Y+
Sbjct: 436 FFESSIPKNMKDYSVYDTLLTSYTRSDKTLVKAEGVFEKMRELGFLSKLSPFNSIISLYI 495
Query: 191 RLGQPEKVRPLVNQMKQRNI 210
+ KV L+ MKQ NI
Sbjct: 496 EQRKLSKVNKLLCDMKQNNI 515
>gi|413947980|gb|AFW80629.1| hypothetical protein ZEAMMB73_384852 [Zea mays]
Length = 184
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+L AL KLN ID +KQ + EWES ++D++L +++IR++L+ M EEA ++ K+
Sbjct: 1 MLHALYKLNDIDRMKQIYMEWESNYETFDVKLTNMMIRSHLKVGMTEEAEMLVEKVKE-- 58
Query: 384 NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEK 443
N + K+ E F+ +Y+ + ++ ALN +E +K+ + Q + F ++FEE K
Sbjct: 59 NGAEFDTKTCELFLDHYMGTEDMNSALNWLENMTKLSKKAE-KLDQDRIYKFQKYFEEHK 117
Query: 444 DVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
D DGAE FC L++L C+D AY L++TY+AAGK + +RQ
Sbjct: 118 DADGAERFCNCLRTLGCIDGKAYESLLRTYLAAGKKSCSLRQ 159
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 196/442 (44%), Gaps = 70/442 (15%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIM-EGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
D L++R++A ++ L + + E + V K ++ ++ L + R+ AL++ WM
Sbjct: 54 DSLFRRVAAAADPRLPLSPVLEQWCLAEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWM 113
Query: 103 ESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTE 161
R +H S D A L+L K G+ A +YF+ + + K + YG+LL CY + E
Sbjct: 114 TERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVE 173
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+A LFEKM + + ++ A+N + +YL+ GQ E+ V+ M Q M
Sbjct: 174 KAEELFEKMRGMG-MASSYAYNVMMRLYLQNGQVER----VHSMHQA------------M 216
Query: 222 QSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP 281
+ + D+ TT++ +A +
Sbjct: 217 EESGIVPDVS-------------------TTHTLVAVL---------------------- 235
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
R +K L++ Y ++ A+ V S N+ Y+ + L K+N + ++ +
Sbjct: 236 RKKKT---LVAAYVVAEDIKAIENVLEKANSC----NSMYMCRIGVLLKMNDMVGAEKAY 288
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYL 401
EEWES+ +D RL ++++ AY ++ + ++A + + K+ F + Y
Sbjct: 289 EEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMP--FANTCYKLAGGYF 346
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+ Q+ A + + AL+ A W P V +F E+K+V+ AEE +L+ L
Sbjct: 347 KVGQVSKAADLTKKALASASN-EWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTP 405
Query: 462 DFSAYSLLIKTYIAAGKLASDM 483
Y L+KTY+ AGK SD+
Sbjct: 406 TRDIYHGLLKTYVNAGKPVSDL 427
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 193/438 (44%), Gaps = 18/438 (4%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSY 111
+ +G SV AL+ ++ +GK + + LRK Y AL++ EW++ K
Sbjct: 135 VSVSGLSVGSALDKWVEQGKDTSRTEFASAMLQLRKRRMYGRALQMTEWLDDNKQFEMKE 194
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMD 171
D+A LDL +K G+ E Y + E + Y LL+ Y A A+F KM
Sbjct: 195 RDYASRLDLISKVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTAEAVFNKMK 254
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+L F +T N + +Y R+ + +K+ ++ M++ N+ + TY + + + NDI
Sbjct: 255 DLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLMEKENLKPNLNTYKILIDTKGLSNDIT 313
Query: 232 GVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHF 289
G+E++ M +E E R +A Y A L EKAE LK++E E +R Y
Sbjct: 314 GMEQIVETMKSEGVEPDLRARAL--IARNYASAGLKEKAEKVLKEMEGESLEENRHVYKD 371
Query: 290 LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS 349
L+S+Y D V R+W I + P N S +L A K++ + + FE+
Sbjct: 372 LLSVYGFLQRADEVTRIWKICEEK-PRYNESLAAIL-AFGKIDKVKEAEAVFEKMLKMSH 429
Query: 350 SYDMRLADVIIRAYLQKDMYEEAA-LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDL 408
+ V++R Y+ M E L+ N A ++ + YL + +++
Sbjct: 430 RVSSNVYSVLLRVYVDHKMVSEGKDLVKQMLDSGCNIGALTL---DAVIKLYLEAGEVEK 486
Query: 409 ALNEMEAALSEAKQF-HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD-FSAY 466
A E++LS+A Q +P+ + + DV E+ + +K F Y
Sbjct: 487 A----ESSLSKAIQSKQIKPLMSSFMYVMGEYVRRGDVHNTEKIFQRMKQFGYQSRFRTY 542
Query: 467 SLLIKTYIAAGKLASDMR 484
LI+ Y+ A A M+
Sbjct: 543 QALIQAYVNAKAPAYGMK 560
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 203/437 (46%), Gaps = 16/437 (3%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES-RKMHFSY 111
+ A G S+ AL+ ++ EG + + + + LR+ Y AL++ EW+E+ +K+ +
Sbjct: 138 VSAPGLSIGSALDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEANKKIEMNE 197
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKM 170
D++ LDLT K G+ E Y + + K Y LL NC + + L +F +M
Sbjct: 198 RDYSSRLDLTVKIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSEL-VFNRM 256
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
+L F + + + +Y R+ + +K+ ++ M++ N+ LTY + + NDI
Sbjct: 257 KDLGFPLSGFTCDQMLLLYKRIDR-KKIADVLLLMEKENVKPSLLTYKILIDVKGATNDI 315
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHF 289
G+E++ M +E + + T + A Y A L EKAE LK++E E +R+A+
Sbjct: 316 SGMEQILETMKDEGV-QPDFQTQALTAKHYSGAGLKEKAEKVLKEMEGESLEANRRAFKD 374
Query: 290 LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS 349
L+S+Y + D V R+W I +S P L + A KLN + + FE+ +
Sbjct: 375 LLSIYASLGREDEVTRIWKICES--KPYFDESLAAIHAFGKLNKVQEAEAIFEKIVTMGR 432
Query: 350 SYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR-ESFMIYYLRSRQLDL 408
V++R Y+ M + + K+ A + R + ++ + Y+ + +++
Sbjct: 433 RASSNTYSVLLRVYVDHKMLSKGKDLV---KRMAESGCRIEATTWDALIKLYVEAGEVEK 489
Query: 409 ALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYS 467
A + ++ A +KQ H + M + + + DV E+ F K+ + +
Sbjct: 490 ADSMLDKA---SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREVGYTSRLRQFQ 546
Query: 468 LLIKTYIAAGKLASDMR 484
L++ YI A A MR
Sbjct: 547 ALLQAYINAKAPAYGMR 563
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 207/440 (47%), Gaps = 22/440 (5%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES-RKMHFSY 111
+ A G S+ AL+ ++ EG + + + + LR+ Y AL++ EW+E+ +K+ +
Sbjct: 137 VSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTE 196
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKM 170
D+A LDLT K G+ E + + K Y LL NC + + L +F KM
Sbjct: 197 RDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSEL-VFNKM 255
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
+L F + + + ++ R+ + +K+ ++ M++ NI LTY + + NDI
Sbjct: 256 KDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDI 314
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHF 289
G+E++ M +E + + T + A Y A L +KAE LK++E E +R+A+
Sbjct: 315 SGMEQILETMKDEGVE-LDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKD 373
Query: 290 LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE---EWES 346
L+S+Y + D V R+W I +S P L +QA KLN + + FE + +
Sbjct: 374 LLSIYASLGREDEVKRIWKICES--KPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDR 431
Query: 347 RCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR-ESFMIYYLRSRQ 405
R SS V++R Y+ M + + K+ A + R + ++ + Y+ + +
Sbjct: 432 RASSSTY---SVLLRVYVDHKMLSKGKDLV---KRMAESGCRIEATTWDALIKLYVEAGE 485
Query: 406 LDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFS 464
++ A + ++ A +KQ H + M + + + DV E+ F K+ ++
Sbjct: 486 VEKADSLLDKA---SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLR 542
Query: 465 AYSLLIKTYIAAGKLASDMR 484
+ L++ YI A A MR
Sbjct: 543 QFQALMQAYINAKSPAYGMR 562
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 197/439 (44%), Gaps = 21/439 (4%)
Query: 55 ATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTD 113
A G +V+ AL+ ++ EGK + +D + + +LRK Y AL+ EW+E+ K+ F D
Sbjct: 155 APGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKD 214
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKMDE 172
+A LDL K G+ AE Y + + + Y LL NC ++A +F KM +
Sbjct: 215 YASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLLANCVIA-CNVQKAEEVFNKMKD 273
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
L+F A N L +Y R + KV ++ M++ N+ TY + + + NDI G
Sbjct: 274 LEFPITAFACNQLLLLYKRTDK-RKVADILLLMEKENVKPSRFTYRILIDTKGLSNDITG 332
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLI 291
+E+V M E + +T S LA Y+ L +KA+ LK++EE+ R L+
Sbjct: 333 MEQVVDTMKAEGIE-LDVSTLSVLAKHYISGGLKDKAKAILKEMEEINSEGSRWPCRILL 391
Query: 292 SLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSY 351
LY D V R+W I S P + + A KL I ++ F+
Sbjct: 392 PLYGELQMEDEVRRLWEICGSN--PHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEKL 449
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNN---AKKRANASARFFK-SRESFMIYYLRSRQLD 407
R ++ Y E++ ++ K+ A + +R + ++ + Y+ + +++
Sbjct: 450 SARHYSTMLNVY-----REDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVKLYVEAGEVE 504
Query: 408 LALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD-FSAY 466
A + + + Q+ +PM T T + DV AE+ +++ + S +
Sbjct: 505 KADSFL---VKTVLQYKKKPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQF 561
Query: 467 SLLIKTYIAAGKLASDMRQ 485
LI+ Y+ A A MR+
Sbjct: 562 QTLIQAYVNAKAPAYGMRE 580
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 198/430 (46%), Gaps = 14/430 (3%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVY 117
SV AL+ ++ EGK + + + + LRK + AL+ EW+E+ ++ F+ D+A
Sbjct: 155 SVPSALDKWVSEGKDLSRAEISLAMLHLRKRRMFGKALQFSEWLEANGQLEFNQRDYASR 214
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
LDL AK G+ AE Y + + + + LL Y ++A +F KM +L+F
Sbjct: 215 LDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFPM 274
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
A + + +Y R+ + K+ +++ M++ N+ TY + + + NDI G+E+V
Sbjct: 275 TPFAHDQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQVV 333
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCN 296
M E K +T S LA YV L +KA++ LK +EE + R L+ LY
Sbjct: 334 DSMKAEG-IKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILLPLYGA 392
Query: 297 TSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
D V R+W I ++ P + + A KL + ++ F+ + R
Sbjct: 393 LQMEDEVRRLWKICEAN--PHMEESMAAIVAWGKLKNVQEAEKIFDRFVKTWKKPSTRHY 450
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK-SRESFMIYYLRSRQLDLALNEMEA 415
+ ++ Y M + + N + A + R + + ++ + Y+ + +++ A + +
Sbjct: 451 NTMMNVYGGSKMLTKGKELVN---QMAESGCRMDELTWDAVVKLYVEAGEVEKADSFLVK 507
Query: 416 ALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYI 474
A+ +++ +P+ + T + DV AE+ F K+++S + L++ Y+
Sbjct: 508 AV---QKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMIQSGFVPRLGQFGTLLQAYV 564
Query: 475 AAGKLASDMR 484
+ A M+
Sbjct: 565 NSKTPAYGMK 574
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 207/448 (46%), Gaps = 24/448 (5%)
Query: 37 PFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHAL 96
P ++ L K + L A V+G L ++ G T + + Y + +LRK Y AL
Sbjct: 139 PMKKASQSPLLKVM--LEAPRNGVSGTLKKWLDGGNTFDRSDIFYVIMNLRKRKFYFKAL 196
Query: 97 EVIEWME-SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYC 155
+++EW+E S+ + D+A LDL AK +G+ AEKY + + + Y LL
Sbjct: 197 QLLEWLEDSKVIDLGERDYASRLDLVAKVHGVYKAEKYIDSIPISHRGEIVYRTLLANCV 256
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
E +++ +F KM +L F A N L +Y R+ + +K+ ++ +M++ N+
Sbjct: 257 SEANVKKSEEVFNKMKDLGFPVTVFAINQLLLLYKRVDK-KKIADVLAKMEKENVKPSLF 315
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
TY + + + + DI G+E+V M E + + +A Y+ A EKAE L+
Sbjct: 316 TYKLLVDTKGAIRDIAGMEKVVESMQAEGVEP-DLLFQATIAKHYIFAGHREKAEAILES 374
Query: 276 LEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAI 334
+E + +R A L+ LY D V R+W + ++ P L +++ +L +
Sbjct: 375 MEGGDIKGNRNACKILLPLYAFLGKKDDVERMWQVCEAN--PRLDECLSAIESFGRLGDV 432
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF-FKSR 393
+ ++ FE+ + + + + +++ Y ++++++ + AK+ R +
Sbjct: 433 ERAEKVFEDMFATWKTLSSKFYNALMKVYADQNLFKKGKEL---AKRMDEDGCRLGISTI 489
Query: 394 ESFMIYYLRSRQLDLALNEMEAALSE-AKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFC 452
+S + Y+ + ++D A E+ L + +K +P + + ++ D+ +E
Sbjct: 490 DSLVKLYVGAGEVDKA----ESILHKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSE--- 542
Query: 453 KVLKSLNCLDFSA----YSLLIKTYIAA 476
KV L + ++ Y LL+ Y+ A
Sbjct: 543 KVFDQLRQMGYNGRVRQYQLLLNAYVHA 570
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 190/442 (42%), Gaps = 36/442 (8%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME-SRKMHFSYTDFAV 116
G V L + EG + K+ML + LRK+ R ALEV +WM +++ D +
Sbjct: 92 GHVVPMLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYYTKQFPQDLDDVIL 151
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
+D+ + I A+K F L + K Y + + + M A + K E K
Sbjct: 152 RMDMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLK 211
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS-----LDNLTYIVWMQSYSHLNDID 231
N + F+ L+ +Y R G KV L ++ + L+NL M S L+ I
Sbjct: 212 PNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNL-----MVSKYELHGIS 266
Query: 232 GVERVFYEMCNECED--KCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-----PRDR 284
E +F ++ D + +TYS +A+ Y+ A + +KA+ L+ +E+ P+ R
Sbjct: 267 SAEEIFNQLVPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLR 326
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
+ YH LIS+Y N D + RVW K Y+ ++++ + + + ++ F+E
Sbjct: 327 RTYHILISMYSTMKNRDGMERVW---KKIEDLKAQDYVAMIESCGRADEVGSAEKYFKEA 383
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY---- 400
+ + L ++ Y K ++A +F K++ SR++ +Y
Sbjct: 384 DRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQD-------VSRDALCYHYIILA 436
Query: 401 -LRSRQLDLALNEMEAALSEA-KQFHWRPMQVT-VDTFFRFFEEEKDVDGAEE-FCKVLK 456
L +R +D A+ +E A + + RP T D E DV AE K
Sbjct: 437 NLNARNIDRAVEILELAEAAGMRDGRSRPFLGTFCDVLKTIARETGDVALAETLLADWRK 496
Query: 457 SLNCLDFSAYSLLIKTYIAAGK 478
D + Y+ L++ Y+ AGK
Sbjct: 497 GKYRTDIAVYNHLLRVYLKAGK 518
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 176/396 (44%), Gaps = 13/396 (3%)
Query: 94 HALEVIEWME-SRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGAL 150
HALE+ +WM SR F+ T D +DL ++ + AE+ F L+ ++ Y AL
Sbjct: 713 HALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNAL 772
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
L Y K+ RA LF+++ + + + N L++MY +L +V L + ++ +
Sbjct: 773 LLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLRLDAEVLMLAKEAQKLGV 832
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA----ELF 266
LD Y + + + + ++ VE++ Y D+ R+ T +A+IYV A ++
Sbjct: 833 ELDMCFYNLLLPAKFRVQGLEDVEKL-YATITSPRDRTRFFTCLAMANIYVSAGRNDKVL 891
Query: 267 EKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLL 325
E EL + +E + R+ Y+ LIS+Y + + V R W LK P Y ++
Sbjct: 892 EMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTEDYCCII 951
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLA-DVIIRAYLQKDMYEEAALIFNNAKKRAN 384
+A KL + + F+ E+ S + ++ Y M EEA + +
Sbjct: 952 RAWGKLGHVVRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVRRMEYELG 1011
Query: 385 ASARFFKSRESFMIYYLRSRQLDLALNEMEAALS-EAKQFHWRPMQVTVDTFFRFFEEEK 443
+ ++ Y ++ + L+ + AA + K+ + P+ T+ +
Sbjct: 1012 VKLDPW-CYHHLVLLYAKAGDIGKMLSTLRAAQACGKKERRFTPLAATLWAALNTLADAG 1070
Query: 444 DVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIAAGK 478
DVD AEE + +S + Y+ L++ ++ A +
Sbjct: 1071 DVDTAEETLTRWKRSGYRVTTGLYNRLLRAHLVAAR 1106
>gi|125532536|gb|EAY79101.1| hypothetical protein OsI_34208 [Oryza sativa Indica Group]
Length = 369
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 126/249 (50%), Gaps = 7/249 (2%)
Query: 239 EMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCN 296
E + C D W +Y+ + + +++ + E+A A ++ E+ K +R AY FL+++Y +
Sbjct: 100 EKADSCNDLMTWHSYATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLTMYAD 159
Query: 297 TSNLDAVNRVWGILKSTFPPT--NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
V+R+W + KS P + N+ Y+ + L K+N I ++ +EEWES+ +D R
Sbjct: 160 LGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSR 219
Query: 355 LADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEME 414
L ++++ AY ++ + E+A + + K+ F + Y + Q A + +
Sbjct: 220 LINLLLTAYCKEGLMEKAEALVDQFVKKGRTP--FGNTWYKLAGGYFKVGQASKAADLTK 277
Query: 415 AALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYI 474
AL+ A W P V +F E+K+V+ AEE +L+ L Y L+KTY+
Sbjct: 278 KALASASN-EWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYV 336
Query: 475 AAGKLASDM 483
AGK SD+
Sbjct: 337 NAGKPVSDL 345
>gi|449437712|ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 191/439 (43%), Gaps = 21/439 (4%)
Query: 55 ATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTD 113
A G +V+ AL+ ++ EGK + +D + + +LRK Y AL+ EW+E+ K+ F D
Sbjct: 147 APGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKD 206
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKMDE 172
+A LDL K G+ AE Y + + + Y LL NC +A +F KM
Sbjct: 207 YASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYQTLLVNCVIAS-NVHKAEKVFNKMKN 265
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
L+F A N L +Y R + K+ ++ MK+ N+ TY + + NDI G
Sbjct: 266 LEFPITAFACNQLLLLYKRTDK-RKIADVLLLMKKENVKYSTSTYRILIDVNGLSNDITG 324
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLI 291
+E V M E K T S L YV L +KA+ LK++EE+ R L+
Sbjct: 325 MEEVVDSMKAEG-IKLDVETLSRLVKHYVSGGLKDKAKAILKEMEEINSEGSRWPCRILL 383
Query: 292 SLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSY 351
LY D V R+W I S P + + A KL I ++ F+
Sbjct: 384 PLYGELQMEDEVRRLWEICGSN--PHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEKL 441
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNN---AKKRANASARFFK-SRESFMIYYLRSRQLD 407
R ++ Y E++ ++ K+ A + +R + ++ + Y+ + +++
Sbjct: 442 SARHYSTMLNVY-----REDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVKLYVEAGEVE 496
Query: 408 LALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD-FSAY 466
A + + + Q+ +PM T T + DV AE+ +++ + S +
Sbjct: 497 KADSFL---VKTVLQYKKKPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQF 553
Query: 467 SLLIKTYIAAGKLASDMRQ 485
LI+ Y+ A A MR+
Sbjct: 554 QTLIQAYVNAKAPAYGMRE 572
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 160/340 (47%), Gaps = 27/340 (7%)
Query: 5 NQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGAL 64
++ LI GS+ ++L TP + PF L++ + L + S+ L
Sbjct: 226 DRDELIQKGSHHEKELADTPFK----------PF-------LFQIV--LDTSMSSLMPVL 266
Query: 65 NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAK 123
+ ++ G + +D + + LRK Y AL+ +EW+E RK+ +F D+A +LDL A+
Sbjct: 267 DGWVKIGNRLERDKVNMVLFHLRKQRMYNKALKFVEWIERRKLLNFEERDYASHLDLIAR 326
Query: 124 TNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKMDELKFLGNTVAF 182
G+ AA+KY + E ++ Y LL NC C++ ++A +F ++ EL A
Sbjct: 327 NYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRD-DAQKAEQVFNEIRELSLPLTISAC 385
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N + +Y R+ + KV ++ M++ NI TY + + NDI G+E+V M
Sbjct: 386 NQMLLLYKRVSR-NKVVDILTLMEKENIKYSIFTYKLMIDLKVRSNDILGMEQVLNSM-K 443
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDA 302
E + +T + +A Y+ EKAE + +E +R A L+ LY
Sbjct: 444 ENGLEPNFTIQTMVAKFYISGCFTEKAEEVINAMEVHVKANRHAVRSLLDLYAILGRPVD 503
Query: 303 VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
V RVW + P +L ++A +KL I+ ++ F+
Sbjct: 504 VERVWNLCAE---PKLEDFLAAIKAWSKLGHIERAEEIFD 540
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 191/442 (43%), Gaps = 36/442 (8%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME-SRKMHFSYTDFAV 116
G V L + EG + K+ML + LRK+ R ALEV +WM +++ D +
Sbjct: 92 GHVVPMLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYYTKQFPQDLDDVIL 151
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
+D+ + I A+K F L + K Y + + + M A + K E K
Sbjct: 152 RMDMAVRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLK 211
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS-----LDNLTYIVWMQSYSHLNDID 231
N + F+ L+ +Y R G KV L ++ + L+NL M S L+ I
Sbjct: 212 PNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNL-----MVSKYELHGIS 266
Query: 232 GVERVFYEMCNECED--KCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-----PRDR 284
E +F ++ D + +TYS +A+ Y+ A + +KA+ L+ +E+ P+ R
Sbjct: 267 SAEEIFNQLVPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLR 326
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
+ YH LIS+Y N D + RVW K Y+ ++++ + + + ++ F+E
Sbjct: 327 RTYHILISMYSTMKNRDGMERVW---KKIEDLKAQDYVAMIESCGRADEVGSAEKYFKEA 383
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY---- 400
+ + L ++ Y K ++A +F K++ SR++ +Y
Sbjct: 384 DRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQD-------VSRDALCYHYIILA 436
Query: 401 -LRSRQLDLALNEMEAALSEA-KQFHWRPMQVT-VDTFFRFFEEEKDVDGAEE-FCKVLK 456
L ++ +D A+ +E A + + RP T D +E DV AE K
Sbjct: 437 NLNAKNIDRAVEILELAEAAGMRDGRSRPFLGTFCDVLKTIAKETGDVALAETLLADWRK 496
Query: 457 SLNCLDFSAYSLLIKTYIAAGK 478
D + Y+ L++ Y+ AGK
Sbjct: 497 GKYRTDIAVYNHLLRVYLKAGK 518
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 164/367 (44%), Gaps = 12/367 (3%)
Query: 94 HALEVIEWME-SRKMHFSYT--DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGAL 150
HALE+ +WM SR F+ T D +DL ++ + AE+ F L+ ++ Y AL
Sbjct: 713 HALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNAL 772
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
L Y K+ RA LF+++ + + + N L++MY +LG +V L + ++ +
Sbjct: 773 LLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLGLDAEVLMLAKEAQKLGV 832
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA----ELF 266
LD Y + + + + ++ VE++ Y D+ R+ T +A+IYV A ++
Sbjct: 833 ELDMCFYNLLLPAKFRVQGLEEVEKL-YATITSPRDRTRFFTCLAMANIYVSAGRNDKVL 891
Query: 267 EKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLL 325
E EL + +E + R+ Y+ LIS+Y + + V R W LK P Y ++
Sbjct: 892 EMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTEDYCCII 951
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLA-DVIIRAYLQKDMYEEAALIFNNAKKRAN 384
+A KL + + F+ E+ S + ++ Y M EEA + +
Sbjct: 952 RAWGKLGHVVRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVQRMEYELG 1011
Query: 385 ASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEA-KQFHWRPMQVTVDTFFRFFEEEK 443
+ ++ Y ++ + L+ + AA + K+ + P+ T+ +
Sbjct: 1012 VKLDPW-CYHHLVLLYAKAGDIGKMLSTLRAAQAGGKKERRFTPLAATLWAALNTLADAG 1070
Query: 444 DVDGAEE 450
DVD AEE
Sbjct: 1071 DVDTAEE 1077
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 198/438 (45%), Gaps = 18/438 (4%)
Query: 55 ATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME-SRKMHFSYTD 113
A+G SV+ AL+ ++ EG + D + + SLR+ + AL+ EW+E S ++ F+ D
Sbjct: 147 ASGLSVSSALDKWVSEGNELSWDDISSTMMSLRRRRMFGKALQFSEWLEASGQLEFNEND 206
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDEL 173
+A LDL AK G+ AE Y + + + Y LL Y +A +F KM +L
Sbjct: 207 YASRLDLIAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFNKMKDL 266
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
+F T A+N + +Y R K+ ++ M++ N+ TY + + + DI G+
Sbjct: 267 EFPMTTFAYNQVLVLYKR-NDRRKIADVLLLMEKENVKPSPFTYKILIDAKGLSKDISGM 325
Query: 234 ERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLIS 292
E+V M E + LA YV L +KA+ LK++EE+ + R L+
Sbjct: 326 EQVVDTMKAEGIE-LDVFALCLLAKHYVSCGLKDKAKATLKEMEEINSKGSRWPCRLLLP 384
Query: 293 LYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE----WESRC 348
LY D V R+W I ++ P + + A KL I ++ F++ W +
Sbjct: 385 LYGELEMEDEVRRLWEICEAN--PHIEECMAAIVAWGKLKNIHEAEKIFDKVVKTWPKKK 442
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDL 408
S + +I+ Y M + + N + + + ++ + Y+ + +++
Sbjct: 443 IS--TKHYCTMIKVYGDCKMLTKGKELVNQMAESGYSIDPL--AWDAVVKLYVEAGEVEK 498
Query: 409 ALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYS 467
A + A+ K++ RP+ + T + DV AE+ F K+ +S F+ +
Sbjct: 499 ADTFLVKAV---KKYEMRPLYCSYRTLMNHYARRGDVHNAEKIFYKMRQSGYGPWFNQFE 555
Query: 468 LLIKTYIAAGKLASDMRQ 485
LI+ Y+ + A MR+
Sbjct: 556 TLIQAYVNSKTPAYGMRE 573
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 200/439 (45%), Gaps = 18/439 (4%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSY 111
+ A+ SV L+ ++ EGK + + + + +LRK + AL++ EW E+ K F
Sbjct: 96 VSASDVSVQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQLSEWFEANKPQEFVE 155
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKM 170
D+A LDL AK G+ AE Y + + + K Y LL NC + ++A +F KM
Sbjct: 156 RDYASRLDLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVV-DHNVKKAEEVFNKM 214
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
+L+F A N L +Y RL + +K+ ++ M++ N+ TY + + + ND+
Sbjct: 215 RDLEFPITPFACNQLLLLYKRLDK-KKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDM 273
Query: 231 DGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK-AYH 288
G++++ M E E R T + +A YV L EKAE LK++E + + A
Sbjct: 274 TGMDQIVETMKAEGIEPDIR--TQAIMARHYVSGGLKEKAEAILKEMEGGNLEEHRWACR 331
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRC 348
F++ LY D V+RVW + + P + ++A +L ID + FE
Sbjct: 332 FMLPLYGALGKADEVSRVWKFCEKS--PRLDECMAAIEAWGRLKKIDEAEAVFELMSKTW 389
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK-SRESFMIYYLRSRQLD 407
R +++ Y M + + K+ ++ R + ++ + Y+ + +++
Sbjct: 390 KKLSSRHYSTLLKVYANHKMLSKGKDLI---KRMGDSGCRIGPLTWDALVKLYVEAGEVE 446
Query: 408 LALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAY 466
A + + A+ + K +PM + + + D+ AE+ F ++ ++ +
Sbjct: 447 KADSILNKAVQQNK---IKPMYSSFLIIMERYATKGDIHNAEKMFHRMRQAGYQARIRQF 503
Query: 467 SLLIKTYIAAGKLASDMRQ 485
LI+ YI A MR+
Sbjct: 504 QTLIQAYIIAKAPCYGMRE 522
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 147/299 (49%), Gaps = 20/299 (6%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLE-----YCVRSLRKFGRYRHALEVIEWMES-RK 106
+ A G SV L+ ++ EG+ + D LE + +R R FGR AL++ EW+E+ ++
Sbjct: 13 ISAPGVSVHSVLDKWVAEGRDL--DQLEISNAMFNLRKRRLFGR---ALQLSEWVEANKR 67
Query: 107 MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALA 165
F D+A LDL AK G+ AE Y + + K Y LL NC ++A+
Sbjct: 68 KDFDERDYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSAN-NAKKAVE 126
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
+F KM +L+ ++N L +Y R + +K+ ++ M++ N+ TYI+ + +
Sbjct: 127 VFNKMKDLELPITLFSYNQLLLLYKRHDK-KKIADVLLSMEKENVKPSLFTYILLIDTKG 185
Query: 226 HLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD- 283
NDI G+E++ M E E + T + +A YV L EKAE+ LK++E +
Sbjct: 186 QSNDIAGMEQIAETMKAEGIEPDIK--TQAIMARHYVSGGLKEKAEIVLKEMEGGNLEEH 243
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
R A F++ LY D V+R+W K + P + ++A +L I + FE
Sbjct: 244 RWACQFMLPLYGTLGKADEVSRLWKFCKKS--PRLDECMAAIEAWGQLKKIPEAEAVFE 300
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 220/470 (46%), Gaps = 20/470 (4%)
Query: 22 STPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEY 81
+ P + ++R++ T ++ L K + L A VT AL + +G + L Y
Sbjct: 133 AKPEKEHTRRLSDSILLKTLSDSILLK--TVLEAPRHQVTSALEKWAKDGNAFDRGELYY 190
Query: 82 CVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
+ +LRK Y ALE++EW++ ++ F D+A +LDLTAK G+ AE+ +
Sbjct: 191 VLLNLRKRHWYSKALELVEWVQKSQLFEFVERDYAAHLDLTAKVYGLHKAEQTIEKIPAS 250
Query: 141 AKNRYTYGALL-NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ Y LL NC + +++ +F +M +L F +FN L +Y RL + +K+
Sbjct: 251 CRGEIVYRTLLANCVSASNI-KKSEQVFNRMKDLGFPVTQFSFNQLLLLYKRLDR-KKIA 308
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
++ M++ ++ TY + + + + DI+ +E+V M + + T + +A
Sbjct: 309 DVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAMEKVIESMEKDSIEP-DLTFNATIARH 367
Query: 260 YVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
Y+ EKAE LK +E + ++R A L+ L+ N DAV R+W K+ T
Sbjct: 368 YIFYGQREKAEALLKAMEGDDIQKNRAACKTLLPLHAFLGNSDAVERIW---KACEDNTR 424
Query: 319 TSYLV-LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ V ++A KL ++ ++ FE+ + + + +++ Y ++ ++ +
Sbjct: 425 VAESVSAIEAFGKLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKEL-- 482
Query: 378 NAKKRANASARF-FKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
AK+ RF + ++ + Y+ + +++ A + LS Q H +P+ T T
Sbjct: 483 -AKRMDENRVRFGAPTLDALVKLYVEAGEVEKA-ESLVHKLS--IQNHIKPIYNTYMTLL 538
Query: 437 RFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ ++ DV +E+ F K+ +S Y +L+ Y+ A A R+
Sbjct: 539 DSYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQVLLHAYVRAKAPAYGFRE 588
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 155/329 (47%), Gaps = 21/329 (6%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSY 111
L A V+G L ++ +G TV + + + V +LR+ + AL+++EW+E K+
Sbjct: 153 LEAPWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFSKALQLLEWLEESKLIELVE 212
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMD 171
D+A LDL AK +GI AEK+ + + + Y LL E+ ++A +F KM
Sbjct: 213 RDYASRLDLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFNKMK 272
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+L F A N L +Y R+ + +K+ ++ M++ ++ TY + + + DI+
Sbjct: 273 DLGFPVTVFAINQLLLLYKRVDK-KKISDVLTMMEKEDVKPSLFTYKLLVDTKGASRDIE 331
Query: 232 GVERVFYEMCNECED-KCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFL 290
G+E+V M E E + +A Y+ EKAE L+ +E +R A +
Sbjct: 332 GMEKVVQSM--EAEGITPDLLLQATIAKHYIFGGHREKAEAILESMEGDMKENRNACKMV 389
Query: 291 ISLYCNTSNLDAVNRVWGILKSTFPPTNTSY---LVLLQALAKLNAI----DILKQCFEE 343
+ LY D V R+W + +S NT L ++A +L + ++ F+
Sbjct: 390 MPLYAFLGKKDDVERIWKVCQS-----NTRLDECLSAIEAFGRLGDVEKAEEVFGNMFKT 444
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEA 372
W++ S Y + ++R Y +++ ++
Sbjct: 445 WKTLSSKY----YNAMMRVYANQNLMDKG 469
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 203/443 (45%), Gaps = 27/443 (6%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES-RKMHFSY 111
+ +G SV AL+ ++ +GK + + + + SLR+ Y AL+ ++W+ES +K+ F+
Sbjct: 148 VSVSGLSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKKLEFTE 207
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKM 170
++A LDL AK G+ AEKY + + Y LL NC E + + F KM
Sbjct: 208 KEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENL-RKTEETFNKM 266
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
EL F A N L +Y ++ + + L+ M++ N+ + TY + + NDI
Sbjct: 267 RELGFPVTAFACNQLLLIYKKIDKKKIADVLL-MMEKENVKPSSYTYKILIDVKGLSNDI 325
Query: 231 DGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYH 288
DG+ ++ M E CE T ++LA Y A L EK E LK++E E +
Sbjct: 326 DGMSQIVETMKAEGCE--LDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCP 383
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE----EW 344
L+ LY D V R+W + +S P L ++A +L I+ + FE +W
Sbjct: 384 TLLRLYAILGRADEVERIWKVCESK--PRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKW 441
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR-ESFMIYYLRS 403
+ +Y + +++ Y++ M + + K ++ + ++ + Y+++
Sbjct: 442 KLTARNY-----ESLLKIYIRHKMLNKGKDLI---KTMGDSGCTIGPTTWDALVSLYVQA 493
Query: 404 RQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD- 462
+++ A ++ AL + K +PM T T + + DV AE+ L+ N +
Sbjct: 494 GEVEKADTVLQKALQQNKM---KPMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQANYISR 550
Query: 463 FSAYSLLIKTYIAAGKLASDMRQ 485
S + L + Y A A +R+
Sbjct: 551 ISPFHALAQAYKNAKLPAYGIRE 573
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 131/267 (49%), Gaps = 3/267 (1%)
Query: 109 FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFE 168
S D+ + +DL + G AAE +F L ++ Y ALL+ Y + MT++A LF+
Sbjct: 4 LSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFK 63
Query: 169 KMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN 228
+M + N + +N + T+Y+ +G+ +KV + ++K++ S D TY + + + +
Sbjct: 64 RMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASM 123
Query: 229 DIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA-ELFEKAELALKKLEEMKPRDRKAY 287
D++G + + EM + W Y NLA IYV A +L ++ ++ R+ Y
Sbjct: 124 DLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITY 183
Query: 288 HFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE- 345
FL+ L+ N D + +W +L ++ T+ +Y+ +L + + + ++W+
Sbjct: 184 DFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQR 243
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEA 372
S+ +D+ + + A+L + A
Sbjct: 244 SKAPEFDISACNRLFDAFLNAGFTDTA 270
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 34/304 (11%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+L V LR R R ALEV +WM +KM+ DF+ LT K + AEK+F +
Sbjct: 77 LLRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSARFHLTEKVLNLEEAEKFFESI 136
Query: 138 SEYAKNRYTYGALLNCYCK---ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
E + Y +LL Y + E ++A ++F+KM +L L +N+++++Y LG
Sbjct: 137 PENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGN 196
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+KV ++ +MK+ N+ LDN+T ++ Y+ ++D+ +++ D+ T
Sbjct: 197 RDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL-------ADRKEITRLD 249
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF 314
L + + KAY L+SLY ++ V+RVW K+T
Sbjct: 250 GLTMLAMA----------------------KAYE-LMSLYGEAGEIEDVHRVWDKYKATR 286
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQC-FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
N + L+ +L KL ++ + EWE +D R+ D+++ Y +K M +A
Sbjct: 287 QKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVMKAD 346
Query: 374 LIFN 377
+ N
Sbjct: 347 KLVN 350
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
DKL + + +T L +G V L +++LR + ALE WM
Sbjct: 346 DKLVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMC 405
Query: 104 SRKMHFSYT-DFAVYLDLTAKTNGIAAAEKYF-NGLSEYAKNRYTYGALLNCYCKELMTE 161
+K+ ++ D+A L LT K G+ AE +F + + E K+ Y LL+CY + T+
Sbjct: 406 QKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQ 465
Query: 162 -RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
+A A+FEKM EL FN+L ++Y G+ V L+ MK +NI D +T
Sbjct: 466 SKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNV 525
Query: 221 MQSYSHLNDIDGVERV 236
+++ +++ ID +E+V
Sbjct: 526 LRANAYILAIDSMEKV 541
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 203/443 (45%), Gaps = 27/443 (6%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES-RKMHFSY 111
+ +G SV AL+ ++ +GK + + + + SLR+ Y AL+ ++W+ES +K+ F+
Sbjct: 99 VSVSGLSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKKLEFTE 158
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKM 170
++A LDL AK G+ AEKY + + Y LL NC E + + F KM
Sbjct: 159 KEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENL-RKTEETFNKM 217
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
EL F A N L +Y ++ + + L+ M++ N+ + TY + + NDI
Sbjct: 218 RELGFPVTAFACNQLLLIYKKIDKKKIADVLL-MMEKENVKPSSYTYKILIDVKGLSNDI 276
Query: 231 DGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYH 288
DG+ ++ M E CE T ++LA Y A L EK E LK++E E +
Sbjct: 277 DGMSQIVETMKAEGCE--LDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCP 334
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE----EW 344
L+ LY D V R+W + +S P L ++A +L I+ + FE +W
Sbjct: 335 TLLRLYAILGRADEVERIWKVCESK--PRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKW 392
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR-ESFMIYYLRS 403
+ +Y + +++ Y++ M + + K ++ + ++ + Y+++
Sbjct: 393 KLTARNY-----ESLLKIYIRHKMLNKGKDLI---KTMGDSGCTIGPTTWDALVSLYVQA 444
Query: 404 RQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD- 462
+++ A ++ AL + K +PM T T + + DV AE+ L+ N +
Sbjct: 445 GEVEKADTVLQKALQQNKM---KPMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQANYISR 501
Query: 463 FSAYSLLIKTYIAAGKLASDMRQ 485
S + L + Y A A +R+
Sbjct: 502 ISPFHALAQAYKNAKLPAYGIRE 524
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 219/470 (46%), Gaps = 20/470 (4%)
Query: 22 STPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEY 81
+ P + ++R++ T ++ L K + L A VT AL + +G + L Y
Sbjct: 133 AKPEKEHTRRLSDSILLKTLSDSILLK--TVLEAPRHQVTSALEKWAKDGNAFDRGELYY 190
Query: 82 CVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
+ +LRK Y ALE++EW++ ++ F D+A +LDLTAK G+ AE+ +
Sbjct: 191 VLLNLRKRHWYSKALELVEWVQKSQLFEFVERDYAAHLDLTAKVYGLHKAEQTIEKIPAS 250
Query: 141 AKNRYTYGALL-NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ Y LL NC + +++ +F +M +L F +FN L +Y RL + +K+
Sbjct: 251 CRGEIVYRTLLANCVSASNI-KKSEQVFNRMKDLGFPVTQFSFNQLLLLYKRLDR-KKIA 308
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
++ M++ ++ TY + + + + DI+ +E+V M + + T + +A
Sbjct: 309 DVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAMEKVIESMEKDSIEP-DLTFNATIARH 367
Query: 260 YVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
Y+ EKAE LK +E + ++R A L+ L+ N DAV R+W K+ T
Sbjct: 368 YIFYGQREKAEALLKAMEGDDIQKNRAACKTLLPLHAFLGNSDAVERIW---KACEDNTR 424
Query: 319 TSYLV-LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ V ++A KL ++ ++ FE+ + + + +++ Y ++ ++ +
Sbjct: 425 VAESVSAIEAFGKLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKEL-- 482
Query: 378 NAKKRANASARF-FKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
AK+ RF + ++ + Y+ + +++ A + LS Q H +P+ T T
Sbjct: 483 -AKRMDENRVRFGAPTLDALVKLYVEAGEVEKA-ESLVHKLS--IQNHIKPIYNTYMTLL 538
Query: 437 RFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ ++ DV +E+ F K+ +S Y L+ Y+ A A R+
Sbjct: 539 DSYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQSLLHAYVHAKAPAYGFRE 588
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 151/310 (48%), Gaps = 16/310 (5%)
Query: 51 SALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME-SRKMHF 109
+ L A VT AL + +G + + L Y + +LRK Y ALE++E+++ S+ +
Sbjct: 151 TVLEAPRHQVTSALEKWAKDGNALDRGELYYVLLNLRKRKWYHKALELVEYVQNSQLLEL 210
Query: 110 SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEK 169
D+A +DLTAK G+ AE+Y + ++ Y LL E +++ +F +
Sbjct: 211 GERDYAARVDLTAKVYGLHKAEQYIEKIPASHRSEVVYRTLLANCVAEGNVKKSEQVFNR 270
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M +L F T + N L +Y RL + +K+ ++ M++ ++ TY V + + + D
Sbjct: 271 MKDLGFPVTTFSSNQLLLLYKRLDK-KKIADVLTMMEKEDVKPSIFTYKVLVDAKGMVGD 329
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYH 288
++ +E+V M + + T + +A Y+ +KAE L+ +E + ++R A
Sbjct: 330 VEAMEKVVESMVKDGIEP-DLTFNATIARQYIFNGQRDKAETLLESMEGDDIQKNRAACK 388
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTNTSY---LVLLQALAKLNAIDILKQCFEE-- 343
FL+ LY N DAV R+W + + NT L + A KL ++ ++ FE+
Sbjct: 389 FLLPLYAFLGNGDAVERIWKVCED-----NTRIDECLSAIDAFGKLGNVEKAEKVFEDMF 443
Query: 344 --WESRCSSY 351
W++ S Y
Sbjct: 444 VKWKNLSSKY 453
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 180/393 (45%), Gaps = 27/393 (6%)
Query: 95 ALEVIEWME-SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNC 153
+L+ EW+E S++ F+ D+A +LD AK G+ AEK+ + E + + Y LL
Sbjct: 33 SLQFSEWLERSKQTDFTERDYACHLDCIAKVLGLWKAEKFIEKIPESFRGKLVYQTLLAS 92
Query: 154 YCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
L ++A ++F KM +L A + +Y RL + +K+ ++ MK +NI
Sbjct: 93 CVSVLNIKKAESVFRKMRDLGLPITVEACEQMIIIYKRL-EKKKIPNILLMMKDQNIKPS 151
Query: 214 NLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELAL 273
LTY + + + ND G+E++ M NE + + +A Y+ L +KA+L L
Sbjct: 152 FLTYKLLIDAKCQFNDTTGMEKLVEAMRNEGME-LDVFALAVIARHYISVGLKDKADLIL 210
Query: 274 KKLEEMKPRDR--KAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKL 331
K++E+ K + A L+SLY + N D V R+W K+ P + + ++A KL
Sbjct: 211 KQIEKRKQKGGGLGARRSLLSLYASLGNADEVGRIWKECKAD--PKQSECIAAIRAWGKL 268
Query: 332 NAID----ILKQCFEEWESRCSSYDMRLADVIIRAYLQ---KDMYEEAALIFNNAKKRAN 384
++ + + + W++ Y L +V I L KD+ E+ I + A
Sbjct: 269 GKVEEAEAVSEMMLQTWKNPTFGYYTSLLNVYIDNNLTSKGKDLVEQMGDIGSWAGPL-- 326
Query: 385 ASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKD 444
+ ++ + Y++S ++ A + + L A+ RP+ T + + D
Sbjct: 327 -------TWDALVRLYIKSGDVEKAHSIL---LKVARMKRKRPLYTTCIAVMEHYAKRGD 376
Query: 445 VDGAEEFCKVLKSLN-CLDFSAYSLLIKTYIAA 476
+ E+ + ++ L F + +L+ YI A
Sbjct: 377 IHNTEKLFQSMRELGYTARFKPFEILVDAYINA 409
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 195/437 (44%), Gaps = 14/437 (3%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSY 111
+ +G SV AL+ ++ +GK + E + LRK + AL++ EW+ E+++
Sbjct: 164 VSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEE 223
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMD 171
D+A LDL +K G E Y + E + Y LL + A A+F KM
Sbjct: 224 RDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMK 283
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+L F +T N + +Y R+ + +K+ ++ +++ N+ + TY + + + NDI
Sbjct: 284 DLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDIT 342
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFL 290
G+E++ M +E + + +A Y A L EKAE LK++E E +R L
Sbjct: 343 GMEQIVETMKSEGVE-LDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDL 401
Query: 291 ISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
+S+Y D V RVW I + P L + A K++ + + FE+
Sbjct: 402 LSVYGYLQREDEVRRVWKICEEN--PRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHR 459
Query: 351 YDMRLADVIIRAYLQKDMYEEAA-LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA 409
+ V++R Y+ M E L+ + N A + ++ + Y+ + +++ A
Sbjct: 460 VSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTW---DAVIKLYVEAGEVEKA 516
Query: 410 LNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD-FSAYSL 468
+ + A+ ++KQ +P+ + + DV E+ + +K F AY
Sbjct: 517 ESSLSKAI-QSKQI--KPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQT 573
Query: 469 LIKTYIAAGKLASDMRQ 485
LI+ Y+ A A M++
Sbjct: 574 LIQAYVNAKAPAYGMKE 590
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 198/429 (46%), Gaps = 15/429 (3%)
Query: 57 GGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFA 115
G V A +++ EG + + + + + LRK + ALEV+EW+ R D++
Sbjct: 94 GEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYS 153
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
L+ T K +GI+ EK F+ + +N Y L+ + + +LA +KM EL
Sbjct: 154 YLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGH 213
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ + FN L ++ + + + ++ QMK ++ TY + M+ ++ ++I+G+ +
Sbjct: 214 PISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVK 273
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLY 294
VF EM + + +Y LA+ + A+L+ AE ++ +E+ + + LI LY
Sbjct: 274 VFGEMKQQQVEPNE-VSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDVLIILY 332
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ R WGI++ + SY++ ++A ++ ++ ++ + E +S+
Sbjct: 333 GYLGKPTDLERTWGIVQELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKSKKELKSTE 392
Query: 355 LADVIIRAYLQKDMYEEAALIFNNAKK---RANASARFFKSRESFMIYYLRSRQLDLALN 411
+ +I Y + ++A+ +F + +ANA + + + L++ L+ AL
Sbjct: 393 QFNSMISVYSKHGFIDKASGLFREMEMNGCKANAI-----TYRNLALGCLKAGLLEEALK 447
Query: 412 EMEAALSEAKQFHWR---PMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFS-AYS 467
+E R P T + F E DV+ AE+ + LK+ N ++ Y+
Sbjct: 448 TLELGKGLTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYN 507
Query: 468 LLIKTYIAA 476
LIK Y+ A
Sbjct: 508 TLIKAYVKA 516
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 195/437 (44%), Gaps = 14/437 (3%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSY 111
+ +G SV AL+ ++ +GK + E + LRK + AL++ EW+ E+++
Sbjct: 135 VSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEE 194
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMD 171
D+A LDL +K G E Y + E + Y LL + A A+F KM
Sbjct: 195 RDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMK 254
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+L F +T N + +Y R+ + +K+ ++ +++ N+ + TY + + + NDI
Sbjct: 255 DLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDIT 313
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFL 290
G+E++ M +E + + +A Y A L EKAE LK++E E +R L
Sbjct: 314 GMEQIVETMKSEGVE-LDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDL 372
Query: 291 ISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
+S+Y D V RVW I + P L + A K++ + + FE+
Sbjct: 373 LSVYGYLQREDEVRRVWKICEEN--PRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHR 430
Query: 351 YDMRLADVIIRAYLQKDMYEEAA-LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA 409
+ V++R Y+ M E L+ + N A + ++ + Y+ + +++ A
Sbjct: 431 VSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTW---DAVIKLYVEAGEVEKA 487
Query: 410 LNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD-FSAYSL 468
+ + A+ ++KQ +P+ + + DV E+ + +K F AY
Sbjct: 488 ESSLSKAI-QSKQI--KPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQT 544
Query: 469 LIKTYIAAGKLASDMRQ 485
LI+ Y+ A A M++
Sbjct: 545 LIQAYVNAKAPAYGMKE 561
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 162/366 (44%), Gaps = 26/366 (7%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYL 118
+T L ++ +G V+ L +++LR ++ ALE EWM +K+ D++ L
Sbjct: 51 ITPMLASWQKQGHQVKPSDLRGFIKNLRGSNQFSKALEASEWMGEQKVFDIVPEDYSARL 110
Query: 119 DLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK-ELMTERALALFEKMDELKFLG 177
L G+ AEK+F + + + + Y LL+ Y K E ++A A FEKM EL FL
Sbjct: 111 HLVENVLGLEEAEKFFKSIPKNMTDYFVYATLLSSYTKSENTLDKAEATFEKMRELGFLL 170
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
FN++ ++Y +L + + V LV +M++ + D+ T ++ Y+ I +E F
Sbjct: 171 KPSPFNSMISLYGQLQKLDMVEKLVREMQETKVECDSPTVNNVLRVYADTCKIKAME-TF 229
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNT 297
+E K T +A Y+++ EKA I +Y N
Sbjct: 230 KTWVDEQGIKLEGGTIVAMAKAYLRSGSIEKA---------------------IEMYGNV 268
Query: 298 SNLDA-VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
+ + V R+W K + Y +L +L KL+ + ++ +EEW+ DM +
Sbjct: 269 AGSEKEVYRLWDEYKKETKVNDNGYRTVLSSLLKLDNVQGAEKIYEEWKPEGPKLDMSIP 328
Query: 357 DVIIRAYLQKDM-YEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEA 415
+++ Y + M ++ + KKR + K R F+ + L L + +M
Sbjct: 329 SLLLSRYYAEGMEINIDQMVKSIRKKRYEMHLKKIKERLIFIRRVIVVMGLKLKVEQMVK 388
Query: 416 ALSEAK 421
++ + K
Sbjct: 389 SIRQKK 394
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 192/431 (44%), Gaps = 14/431 (3%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVY 117
SV AL ++ +G + +D + + SLR+ +R AL+ EW+E+ ++ F+ D+A
Sbjct: 157 SVASALVKWVSQGNKLSRDDISSTMISLRRRQMFRKALQFSEWLEANGQLEFNERDYASR 216
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+ L AK G+ AE Y + + + + ALL Y E+A +F K+ +L+F
Sbjct: 217 VHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKDLEFPM 276
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ A+N + +Y ++ + K+ ++ M++ NI TY + + NDI G+E+V
Sbjct: 277 SIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDISGMEQVV 335
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAY-HFLISLYCN 296
M E + +T S LA YV L KA+ LK++EE + L+ Y
Sbjct: 336 DSMKAEGIE-LDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLCRILLPFYGK 394
Query: 297 TSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
D V R+W I ++ P + + A +L + ++ F+ R
Sbjct: 395 LQMEDEVRRLWEICEAN--PHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTWKKLSARHY 452
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKKRANASARF-FKSRESFMIYYLRSRQLDLALNEMEA 415
+++ Y M + + N + A + + + + Y+ + +++ A + +
Sbjct: 453 SIMMNVYRDSKMLTKGKEVVN---QMAESGCHIDLLTCNAIVKLYVEAGEVEKADSFLVK 509
Query: 416 ALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYI 474
A+ K++ +P+ + T + DV AE+ F K+ +S + LI+ Y+
Sbjct: 510 AV---KKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSSYIPRLGQFGTLIQAYV 566
Query: 475 AAGKLASDMRQ 485
A A MR+
Sbjct: 567 NAKTPAYGMRE 577
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 135/289 (46%), Gaps = 5/289 (1%)
Query: 55 ATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
A G SV AL+ ++ EGK + + + + LR+ + AL+ EW+E+ + D+
Sbjct: 140 APGLSVPSALDKWVSEGKELSRADISLTMLYLRRRRMFGKALKFSEWLEANGKLVTDRDY 199
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELK 174
A LDL K G+ AE Y + + + + Y LL +A +F KM +L+
Sbjct: 200 ASQLDLIGKLRGLRMAENYISKIPKSFQGEVVYRTLLANCVMSTNVRKAEEVFNKMKDLE 259
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
F A N L +Y R + +K+ ++ M++ N+ TY + + + NDI G+E
Sbjct: 260 FPITAFACNQLLLLYKRTDK-KKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDISGME 318
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISL 293
+V M E K T LA YV A L +KA+ LK+ EE+ + R+ FL+ L
Sbjct: 319 QVVDTMKAEG-IKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRRPCRFLLPL 377
Query: 294 YCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
Y D V R+W I +S P + + A KL + ++ F+
Sbjct: 378 YGELQMEDEVRRLWEICESN--PHVEECMAAIVAWGKLKNVQEAEKIFD 424
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 205/467 (43%), Gaps = 12/467 (2%)
Query: 16 LVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVR 75
LV+ + TP + +S ++ T N D L +R+ L G SV A +++ +G V
Sbjct: 13 LVQLIRRTPCDIISLKLFCTQA--TQNHDSLSRRIERL-PKGESVGAAFCSWMRDGLPVH 69
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEW-MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
+ + V LRK + AL+V+EW + R D++ ++ T K +GI+ EK F
Sbjct: 70 GVDVFHAVNRLRKLNMNKRALQVMEWVIRERPYRPKELDYSYLVEFTTKLHGISHGEKLF 129
Query: 135 NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ + +N Y L+ + + + +L +KM EL FL + + FN L ++ G+
Sbjct: 130 SRIPVEFQNELLYNNLVIACLDKGVIKLSLEYMKKMRELGFLISHLVFNRLIILHSSPGR 189
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ + L+ QMK ++ TY + M+ ++ ++++ + + F M + +Y
Sbjct: 190 RKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVKFFSRM-KVAQVAPNEISYC 248
Query: 255 NLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
LA + A L+ E ++ +E+ + + L+ LY N + RVW ++
Sbjct: 249 ILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLLMLYGYLGNQKELERVWATIREL 308
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
+ SY++ ++A ++ ++ ++ + E ES + + ++ Y + +AA
Sbjct: 309 PSVRSKSYMLAIEAFGRIGQLNQAEELWLEMESTKGLKSVEQFNSMMSVYCKHGFIGKAA 368
Query: 374 LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWR---PMQV 430
++ N K A+ + + L+S + L ++ L R P
Sbjct: 369 KLYKNMK--ASGCKPNAITYRQLALGCLKSGMAEQGLKTLDLGLRLTISKRVRNSIPWLE 426
Query: 431 TVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIAA 476
T + F E+ D+ E F + KS C Y+ LIK Y+ A
Sbjct: 427 TTLSIVEIFAEKGDMGNVERLFEEFHKSKYCRYTFVYNTLIKAYVKA 473
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 137/294 (46%), Gaps = 7/294 (2%)
Query: 51 SALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME-SRKMHF 109
+ L A SV L+ +I +G + ++ + + L+K Y A + +EW+E ++F
Sbjct: 115 TVLDAHSLSVKSVLDKWIEDGNQLERNEVLLVLFHLKKQRLYWKAFQFMEWIERGHLLNF 174
Query: 110 SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEK 169
D+A +LDL A+ GI A KY + + + +N Y LL + ++A +F +
Sbjct: 175 EERDYACHLDLIARNTGIEDARKYIDRVPKPFRNEVLYETLLVNCVRARDIQKAEEVFRE 234
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
+ +L A N + +Y R+ + KV ++ M++ NI TY + + ND
Sbjct: 235 IRDLSLPLTVSACNQMILLYKRVAR-TKVADIIMLMEKENIKPSPFTYKLIIDLKGRSND 293
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD-RKAYH 288
I GVE EM + + T + +A Y+ L EKA+ + ++E +D R A
Sbjct: 294 ISGVEVTLNEM-KAAGVEPDFVTQTMVAKFYISGGLIEKAKAVVSEIEMEYMKDKRHAVR 352
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
L+ LY S D V R+W + P ++ ++A KL I+ ++ FE
Sbjct: 353 SLLHLYAALSKPDEVARIWKLCTE---PKLDDFMAAIEAWGKLGCIEQAEETFE 403
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 106/245 (43%), Gaps = 13/245 (5%)
Query: 97 EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCY 154
++I ME + S + + +DL ++N I+ E N + + T + Y
Sbjct: 264 DIIMLMEKENIKPSPFTYKLIIDLKGRSNDISGVEVTLNEMKAAGVEPDFVTQTMVAKFY 323
Query: 155 CKELMTERALALFEKMDELKFLGNT-VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
+ E+A A+ ++ E++++ + A +L +Y L +P++V + + +
Sbjct: 324 ISGGLIEKAKAVVSEI-EMEYMKDKRHAVRSLLHLYAALSKPDEVARIWKLCTEPKLD-- 380
Query: 214 NLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELAL 273
++ ++++ L I+ E F M E K Y+ + ++Y + +L +K + +
Sbjct: 381 --DFMAAIEAWGKLGCIEQAEETFEAML-EATQKLSSKYYNGMLNVYAENKLMDKGKKFV 437
Query: 274 KKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP---PTNTSYLVLLQALA 329
+++ + P + L+ LY N+ + + P PT SY+ LL A A
Sbjct: 438 ERMSFDGCPNGPLTWDALVKLYVNSGEVAKADSFLQNATEQNPDRRPTYGSYIYLLMAYA 497
Query: 330 KLNAI 334
K+ I
Sbjct: 498 KMGDI 502
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 125/259 (48%), Gaps = 8/259 (3%)
Query: 86 LRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR 144
LRK Y AL+ +EW++ RK+ +F D+A +LDL A+ +GI AAEKY + E ++
Sbjct: 6 LRKQRMYNKALKFMEWIDRRKLLNFEERDYASHLDLVARNHGIEAAEKYIERVPEAFRSE 65
Query: 145 YTYGALL-NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
Y LL NC C++ ++A +F ++ EL A N + +Y R+ + KV ++
Sbjct: 66 VLYETLLVNCVCRD-DAQKAEQVFNEIRELSLPLTVSACNQMLLLYKRVSR-NKVVDILK 123
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
M+ NI TY + + ND G+E V + E + + + +A Y+
Sbjct: 124 LMENENIKPSLFTYKLMIDLKGRSNDTLGMESVL-NLMKENGFEPDFGIQTMVAKFYISG 182
Query: 264 ELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLV 323
+L EKAE +E +R A L+ LY D V R+W + P +L
Sbjct: 183 DLAEKAEEVTNAMEVYVNANRHAIRSLLDLYAILGRPDDVERIWNLCTE---PKLEDFLA 239
Query: 324 LLQALAKLNAIDILKQCFE 342
++A KL I+ ++ F+
Sbjct: 240 AIKAWGKLGHIERAEETFD 258
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 11/322 (3%)
Query: 52 ALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFS 110
L A S+ L+ +I +G + ++ + L+K YR AL+ +EWME K+ +F
Sbjct: 152 VLDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWMERGKLLNFE 211
Query: 111 YTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEK 169
D+A +LDL A+++GI A+KY + +N Y L+ NC + ++A +F++
Sbjct: 212 KRDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDI-QKAEEVFKE 270
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
+ +L N + +Y R+ P KV ++ M++ N+ TY + + ND
Sbjct: 271 IKDLCLRLTVTLCNQMILLYKRIA-PGKVASVLMLMEKENVKPSAFTYRLLIDLKGRSND 329
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHF 289
+ G+E V EM + +T + +A Y+ L EKAE +K++E + H
Sbjct: 330 LAGIEVVLNEMKAYGIEPST-STQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHV 388
Query: 290 ---LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
L+ LY + + V R+W + P +L ++A +L I+ ++ FE +
Sbjct: 389 IKSLLHLYAALNKPNDVARIWEMCTE---PMLEDFLSAIKAWGELGLIEKAEETFEAMAN 445
Query: 347 RCSSYDMRLADVIIRAYLQKDM 368
+ + ++ Y Q +
Sbjct: 446 APEKLSSKYYNAMLNVYAQNKL 467
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 11/322 (3%)
Query: 52 ALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFS 110
L A S+ L+ +I +G + ++ + L+K YR AL+ +EWME K+ +F
Sbjct: 152 VLDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWMERGKLLNFE 211
Query: 111 YTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEK 169
D+A +LDL A+++GI A+KY + +N Y L+ NC + ++A +F++
Sbjct: 212 KRDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDI-QKAEEVFKE 270
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
+ +L N + +Y R+ P KV ++ M++ N+ TY + + ND
Sbjct: 271 IKDLCLRLTVTLCNQMILLYKRIA-PGKVASVLMLMEKENVKPSAFTYRLLIDLKGRSND 329
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHF 289
+ G+E V EM + +T + +A Y+ L EKAE +K++E + H
Sbjct: 330 LAGIEVVINEMKAYGIEPST-STQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHV 388
Query: 290 ---LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
L+ LY + + V R+W + P +L ++A +L I+ ++ FE +
Sbjct: 389 IKSLLHLYAALNKPNDVARIWEMCTE---PMLEDFLSAIKAWGELGLIEKAEETFEAMAN 445
Query: 347 RCSSYDMRLADVIIRAYLQKDM 368
+ + ++ Y Q +
Sbjct: 446 APEKLSSKYYNAMLNVYAQNKL 467
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 195/436 (44%), Gaps = 28/436 (6%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEY----CVRS-LRKFGRYRHALEVIEWMESR-KMHFSYT 112
SV AL+ ++ EGK + L Y C+ + +F EW+E+ ++ F+
Sbjct: 155 SVPSALDKWVSEGKDLNICFLFYHLIACISVWVSQFS---------EWLEANGQLEFNQR 205
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
D+A LDL AK G+ AE Y + + + + LL Y ++A +F KM +
Sbjct: 206 DYASRLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKD 265
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
L+F A + + +Y R+ + K+ +++ M++ N+ TY + + + NDI G
Sbjct: 266 LEFPMTPFAHDQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISG 324
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLI 291
+E+V M E K +T S LA YV L +KA++ LK +EE + R L+
Sbjct: 325 MEQVVDSMKAEG-IKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILL 383
Query: 292 SLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSY 351
LY D V R+W I ++ P + + A KL + ++ F+ +
Sbjct: 384 PLYGALQMEDEVRRLWKICEAN--PHMEESMAAIVAWGKLKNVQEAEKIFDRFVKTWKKP 441
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK-SRESFMIYYLRSRQLDLAL 410
R + ++ Y M + + N + A + R + + ++ + Y+ + +++ A
Sbjct: 442 STRHYNTMMNVYGGSKMLTKGKELVN---QMAESGCRMDELTWDAVVKLYVEAGEVEKAD 498
Query: 411 NEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLD-FSAYSLL 469
+ + A+ + K+ +PM T T + DV E+ +++ L + S + L
Sbjct: 499 SFLVKAVLQNKK---KPMFTTYITLMDRYASRGDVPNVEKNFAMMRRLGYVGRLSQFQTL 555
Query: 470 IKTYIAAGKLASDMRQ 485
I+ Y+ A A MR+
Sbjct: 556 IQAYVNAKAPAYGMRE 571
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 205/467 (43%), Gaps = 12/467 (2%)
Query: 16 LVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVR 75
LV+ + TP V ++ T N D L +R+ L G SV A +++ +G V
Sbjct: 13 LVQLIHRTPCGIVCLKLFCTQA--TQNHDSLSRRIEKL-PKGESVGSAFRSWMRDGLPVH 69
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEW-MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
+ + + LRK + AL+V+EW + R D++ ++ T K +GI+ EK F
Sbjct: 70 GGDIFHAINRLRKLNMNKRALQVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLF 129
Query: 135 NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ + ++ Y L+ + + + +L +KM EL F + + FN L ++ G+
Sbjct: 130 SRIPVEFQSELLYNNLVIACLDKGVIKLSLEYMKKMRELGFPISHLVFNRLIILHSSPGR 189
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ + L+ QMK ++ TY + M+ ++ ++++ + +VF M + + +Y
Sbjct: 190 RKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVKVFGRM-KVAQVEPNEISYC 248
Query: 255 NLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
LA + A L+ E ++ +E+ + + L+ LY N + RVW ++
Sbjct: 249 ILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLLMLYGYLGNQKELERVWATIQEL 308
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
+ SY++ ++A ++ ++ ++ + E +S + + ++ Y + + AA
Sbjct: 309 PSIRSKSYMLAIEAFGRIGQLNRAEEIWLEMKSTKGLKSVEQFNSMMSVYCKHGFIDRAA 368
Query: 374 LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWR---PMQV 430
++ N K A+ + + L+S + AL ++ L R P
Sbjct: 369 KLYKNMK--ASGCKPNAITYHQLALGCLKSGMAEQALKTLDLGLRLTISKRVRNSTPWLE 426
Query: 431 TVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIAA 476
T + F E+ DV E F + K+ C Y+ LIK Y+ A
Sbjct: 427 TTLSIVEIFAEKGDVGNVERLFEEFHKAKYCRYTFVYNTLIKAYVKA 473
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 8/285 (2%)
Query: 63 ALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYT--DFAVYLDL 120
+L ++ +G + + + LR ++ L+V +W+E +K F T D+A LD+
Sbjct: 149 SLEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDWLEGKK-PFKKTERDYASRLDV 207
Query: 121 TAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
K GI EKYF + + + YG LL Y E+A +F+KM F
Sbjct: 208 ITKILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEIFKKMKAEGFSLTAF 267
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+N L +Y RL + +K++ ++ M+ + TY + + + DI G+E+V M
Sbjct: 268 EYNQLLLLYKRLDK-KKIQDVLKMMEDEGVKPTIFTYKILIDVKGWMGDIGGMEQVAENM 326
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSN 299
+E + + T LA Y++A L EKAE+ LK+LE + +D+++ L+ LY
Sbjct: 327 KSE-DIEMDSGTLELLARHYIRAGLAEKAEVVLKELENVSLKDKRSRLKMLLPLYAELGK 385
Query: 300 LDAVNRVWGILKSTFPPTN-TSYLVLLQALAKLNAIDILKQCFEE 343
V R+W ++ FP Y + A KL I+ + FE+
Sbjct: 386 PTEVERIWKDFEA-FPALRLDEYATGVVAWGKLGQIEKAEITFEK 429
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 204/454 (44%), Gaps = 42/454 (9%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E KL+ + + A S+ L ++ EG + + R + FGR AL + EW+
Sbjct: 123 ESKLFHEI--MNAQCTSLHLVLEKWLEEGNELTR------XRKRKLFGR---ALLLSEWL 171
Query: 103 ESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMT 160
ES+K F D+A LDL AK G+ AE Y + E Y LL NC +
Sbjct: 172 ESKKEFEFIERDYASRLDLIAKLRGLHKAEVYIETIPESCSREIMYRTLLANCVSQN-NV 230
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
++A +F KM +L N L +Y R +K+ L+ M+ I +Y +
Sbjct: 231 KKAEEVFSKMKDLDLPITVFTCNELLFLYKR-NDKKKIADLLLLMENEKIKPSRHSYSIL 289
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EM 279
+ + DI G++++ M + + T + LA Y+ A L +K E LK++E E
Sbjct: 290 IDTKGQSKDIGGMDQIVDRMKAQGIEP-DINTQAVLARHYISAGLQDKVETLLKQMEGEN 348
Query: 280 KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQ 339
++R L+ LY N +D V R+W + ++ P L ++A KLN ID ++
Sbjct: 349 LKQNRWLCRILLPLYANLGKVDEVGRIWKVCETN--PRYDECLGAIEAWGKLNKIDEAEK 406
Query: 340 CFE----EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK-SRE 394
FE +W + SS + ++++ Y +M + + K+ + R + +
Sbjct: 407 VFEMMVKKW--KLSS---KTCSILLKVYANNEMLMKGKDLM---KRIGDGGCRIGPLTWD 458
Query: 395 SFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
+ + Y+++ +++ A + ++ A A+Q +PM T T + + D+ +E K+
Sbjct: 459 TIVKLYVQTGEVEKADSVLQKA---AQQSQMKPMFSTYLTILEQYAKRGDIHNSE---KI 512
Query: 455 LKSLNCLDFSA----YSLLIKTYIAAGKLASDMR 484
+ D+++ Y +L+ YI A A +R
Sbjct: 513 FLRMKQADYTSKAKMYQVLMNAYINAKVPAYGIR 546
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 157/356 (44%), Gaps = 66/356 (18%)
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
+ +Y N + + K Y ALLNCY +E E+A+A F+K+ ++ + + + FN L +Y
Sbjct: 15 SREYANAIPQKLKGFMVYTALLNCYAREKDVEKAVATFKKLTDIGVMRSPLVFNILMYLY 74
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR 249
+ DG E+ +
Sbjct: 75 FQ--------------------------------------TDG------EVVGD------ 84
Query: 250 WTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHF--LISLYCNTSNLDAVNRVW 307
W TY A +KA + E A LKKLE K+ F L+ LY N D + R+W
Sbjct: 85 WNTYCVAADRCLKAGIMEMAMTMLKKLEGQITEKTKSIAFDTLLKLYARKGNKDELYRIW 144
Query: 308 GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
+ N Y+ ++ +L L+ I+ + F++WESR SY R+ +++I AY + +
Sbjct: 145 KSDEKRDKIYNKGYMSMISSLLMLDDIEAAEMMFKKWESRGLSYYFRVPNILINAYCRNN 204
Query: 368 MYEEAALIFNNA-KKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWR 426
+ E+A + ++A K + SA + Y L S L+ + M+ A+ W+
Sbjct: 205 LLEKAGSLIDHAMMKGSEPSADAW--------YSLASGYLE--VEAMKKAILVCP--GWK 252
Query: 427 PMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASD 482
P++ T+ + E + D + AEEF ++L++ N A++ L +TYI K SD
Sbjct: 253 PIKETLASCLDHLEGKGDQNKAEEFIELLRTENIFSPVAHNRL-RTYIKGLKSQSD 307
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 193/433 (44%), Gaps = 23/433 (5%)
Query: 58 GSVTG-ALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMH-FSYTDFA 115
G + G A +++ +G + + + + + LRK R + ALEV+EW+ K + + D++
Sbjct: 70 GELVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWVIREKPYRINELDYS 129
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
L+ T K +GI+ EK F+ + + + L+ + +LA KM E+
Sbjct: 130 YLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVGH 189
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ + FN L ++ + + + +++QMK + L TY + M+ ++ ++I+G+ R
Sbjct: 190 SISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIEGLMR 249
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLY 294
VF +M + + +Y +A+ + A+L+ E ++ LE+ + + Y LI LY
Sbjct: 250 VFSDM-RRAKVEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWSTYDVLIILY 308
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ + R WGI++ FP + +L A+ I +L + E W + ++
Sbjct: 309 GYLNKEKELERTWGIIQG-FPHIPSKSFIL--AIEAFGRIGLLSRAEELWLEMKTKRGIK 365
Query: 355 LAD---VIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRS-------R 404
D I+ Y + + ++A IF K AN + L++ +
Sbjct: 366 ATDQFNSILSVYCRHGLIKKATEIFR--KIEANGCKPNAITFRHLAFGCLKAGLVEEALK 423
Query: 405 QLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFS 464
LDL N + K W ++ T+ + E D++ E+ K LK ++
Sbjct: 424 TLDLGSNTTSSTKIVRKSTPW--LETTL-SMIEILAERGDIENTEKLFKELKEAKYTRYT 480
Query: 465 -AYSLLIKTYIAA 476
Y+ LIK Y+ A
Sbjct: 481 FVYNTLIKAYVKA 493
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 138/304 (45%), Gaps = 40/304 (13%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+L V LR R R ALEV +WM +KM+ DF+ LT K + AEK+F +
Sbjct: 75 LLRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPEDFSARFHLTEKVLNLEEAEKFFESI 134
Query: 138 SEYAKNRYTYGALLNCYCK---ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
E + Y +LL Y + E ++A ++F+KM +L L +N+++++Y LG
Sbjct: 135 PENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGN 194
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+KV ++ +MK+ N+ LDN+T ++ Y+ ++D+ +++ D+ T
Sbjct: 195 RDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL-------ADRKEITRLD 247
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF 314
L LA+ K Y ++ V+RVW K+T
Sbjct: 248 GLTM------------LAMAK-----------------AYVRDGEIEDVHRVWDKYKATR 278
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQC-FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
N + L+ +L KL ++ + EWE +D R+ D+++ Y +K M +A
Sbjct: 279 QKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVMKAD 338
Query: 374 LIFN 377
+ N
Sbjct: 339 KLVN 342
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
DKL + + +T L +G V L +++LR + ALE WM
Sbjct: 338 DKLVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMC 397
Query: 104 SRKMHFSYT-DFAVYLDLTAKTNGIAAAEKYF-NGLSEYAKNRYTYGALLNCYCKELMTE 161
+K+ ++ D+A L LT K G+ AE +F + + E K+ Y LL+CY + T+
Sbjct: 398 QKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQ 457
Query: 162 -RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
+A A+FEKM EL FN+L ++Y G+ V L+ MK +NI D +T
Sbjct: 458 SKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNV 517
Query: 221 MQSYSHLNDIDGVER 235
+++ +++ ID +E+
Sbjct: 518 LRANAYILAIDSMEK 532
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 6/291 (2%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES-RKMHFSY 111
+ A+ + LN + EGK + + + + +LRK + AL+ EWME +K+
Sbjct: 128 MAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVE 187
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMD 171
D+A +DL AK G+ AE Y + + + Y LL ++A +F KM
Sbjct: 188 RDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMK 247
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+L F T A N L +Y R+ + +K+ ++ M++ ++ TY + + + NDI
Sbjct: 248 DLGFPITTFACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDIT 306
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD-RKAYHFL 290
G+E++ M E + S L YV L EKAE LK++E ++ R L
Sbjct: 307 GMEQIVETMKAEGIEP-NLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRWVCRVL 365
Query: 291 ISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ Y D V R+W + +S P ++ ++A KL ++ + F
Sbjct: 366 LPPYAALGKADDVERIWKVCESN--PRLPEFVAAIEAYGKLKKVEEAEAIF 414
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 6/291 (2%)
Query: 53 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES-RKMHFSY 111
+ A+ + LN + EGK + + + + +LRK + AL+ EWME +K+
Sbjct: 165 MAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVE 224
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMD 171
D+A +DL AK G+ AE Y + + + Y LL ++A +F KM
Sbjct: 225 RDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMK 284
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+L F T A N L +Y R+ + +K+ ++ M++ ++ TY + + + NDI
Sbjct: 285 DLGFPITTFACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDIT 343
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD-RKAYHFL 290
G+E++ M E + S L YV L EKAE LK++E ++ R L
Sbjct: 344 GMEQIVETMKAEGIEP-NLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRWVCRVL 402
Query: 291 ISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ Y D V R+W + +S P ++ ++A KL ++ + F
Sbjct: 403 LPPYAALGKADDVERIWKVCESN--PRLPEFVAAIEAYGKLKKVEEAEAIF 451
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 195/430 (45%), Gaps = 30/430 (6%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVY 117
V GAL ++ +G T+ + L Y + SLR+ Y AL+++E++E K+ D+A
Sbjct: 157 DVAGALKKWLNDGNTLDRSELFYVLLSLRRRKLYIKALQLLEYVEESKLIDLGERDYASR 216
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+DL AKT+ I AEKY + + Y LL ++A +F KM +L F
Sbjct: 217 VDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLGFPV 276
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ + N L +Y R+ + +K+ ++ M++ N+ TY + + + DI+ +E+V
Sbjct: 277 SVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVI 335
Query: 238 YEM-CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD----RKAYHFLIS 292
M + E + + +A Y+ EKAE LE+M D R A F++
Sbjct: 336 QAMQADGIEPDLLFQ--ATIARHYIFGGYREKAEAI---LEQMVGDDINENRSACKFVLP 390
Query: 293 LYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAI----DILKQCFEEWESRC 348
LY D V R+W + ++ + ++A KL + +I F+ W++
Sbjct: 391 LYAFLGKNDDVERIWKVCEAN--ARLDECMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLS 448
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK-SRESFMIYYLRSRQLD 407
S Y + +++ Y K ++++ + AK+ + R + +S + Y + +++
Sbjct: 449 SKY----YNAMLKVYANKKLFDKGKEL---AKRMGDDGCRLGPYTLDSLVKLYSDAGEVE 501
Query: 408 LALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAY 466
A + + LS + +PM T + ++ DV AE+ F KV + Y
Sbjct: 502 KA-DSILHKLSYKNKI--KPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQY 558
Query: 467 SLLIKTYIAA 476
LL++ Y+ A
Sbjct: 559 QLLLEAYLNA 568
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 203/459 (44%), Gaps = 13/459 (2%)
Query: 25 TETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVR 84
T+T +I P N L R+ L G + A +++ EG + + + + +
Sbjct: 35 TQTTDVKILEPEE-QEENPKSLSLRIEKL-PRGEPIGLAFQSWMREGFPIHRGDVFHAIN 92
Query: 85 SLRKFGRYRHALEVIEW-MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN 143
LRK + ALEV+EW + R D++ L+ T K +GI+ EK F + +N
Sbjct: 93 RLRKLKLNKRALEVMEWVIRERPYRPKELDYSYLLEFTTKLHGISHGEKLFTRIPTEFQN 152
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
Y L+ ++ + +L +KM EL + + FN L ++ G+ + + ++
Sbjct: 153 ELLYNNLVIACLEKGVIRLSLEYMKKMRELGHPISHLIFNRLIILHSSPGRRKMIPKILT 212
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
QMK + TY + M+ ++ ++++G+ +VF EM E + ++ LA + A
Sbjct: 213 QMKADKVVRHVSTYNILMKIEANEHNVEGLIKVFGEM-KRLEVEPNEVSFCILAIAHAVA 271
Query: 264 ELFEKAELALKKLEEMKPRDR-KAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYL 322
L+ AE ++ +E+ D LI LY ++R+WG +K + SY+
Sbjct: 272 RLYTVAEAYVEAVEKSYTGDNWSTLDVLIILYGYLRKGKKLDRIWGTVKELPHVRSKSYI 331
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
+ ++A ++ + ++ + E +S + ++ Y + + ++A IF +
Sbjct: 332 LAIEAFGRIGQLGRAEELWLEMKSLKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRN 391
Query: 383 A-NASARFFKSRESFMIYYLRSRQLDLALNEMEAAL---SEAKQFHWRPMQVTVDTFFRF 438
+A F+ + L++ ++ AL +E + + K + P T +
Sbjct: 392 GCKPNAITFR---HLALGCLKAELVEEALKTLEMGMDFTTSNKIKNSIPWLETTFSIVEI 448
Query: 439 FEEEKDVDGAEEFCKVLKSLNCLDFS-AYSLLIKTYIAA 476
F E+ DV AE+F + L ++ Y+ LIK Y+ A
Sbjct: 449 FAEKGDVANAEKFFEELHKAKYARYTFVYNTLIKAYVKA 487
>gi|449523950|ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 191
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 35/203 (17%)
Query: 38 FPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALE 97
+ T +D LY+R+S +G SVT L+ +++E V++D L + ++ LR + R++HALE
Sbjct: 23 YSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALE 82
Query: 98 VIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKE 157
V E YFN + K + ALLNCY E
Sbjct: 83 V--------------------------------EDYFNNMPSQLKRCQVHIALLNCYAHE 110
Query: 158 LMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
++A A+ +K+ E+ F ++ +N +Y ++G+ E+ L + +K+ ++ D TY
Sbjct: 111 KYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFER---LDSPLKETDVDHDQFTY 167
Query: 218 IVWMQSYSHLNDIDGVERVFYEM 240
+ +Y+ D G+E++ +M
Sbjct: 168 TTRLSAYATAFDFTGIEKIMEQM 190
>gi|388512893|gb|AFK44508.1| unknown [Medicago truncatula]
Length = 244
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 108/209 (51%), Gaps = 4/209 (1%)
Query: 264 ELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TNTSY 321
ELFEKA+ LKK E + RD+ +H+L+SLY + N D V RVW KS FP N Y
Sbjct: 2 ELFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGY 61
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
++ +L +++ I+ ++ +EEW S S D R+ +++I YL+K ++ F + +
Sbjct: 62 HAIISSLVRMDDIEGAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSE 121
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEE 441
+ E ++ +++ AL+ +E A + W+P + + F + ++
Sbjct: 122 GGGCPNS--TTWELLSEGHIAEKRVSEALSCLEKAFMTSDSKSWKPKPIKLAAFLKLCQD 179
Query: 442 EKDVDGAEEFCKVLKSLNCLDFSAYSLLI 470
E D++ A+ ++L+ + AY+ LI
Sbjct: 180 EDDMESAKVLIELLRKPGYHNDEAYAALI 208
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 139/296 (46%), Gaps = 14/296 (4%)
Query: 57 GGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW-MESRKMHFSYTDFA 115
GG V L+ +I EG+ +++ ++ L+ GR++ A E+ +W ++ R + F
Sbjct: 19 GGPVLHILHQWIAEGRESHGEIIA-AMKRLKWLGRFKQAYEISDWVIKERSLELQKFHFI 77
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSE----YAKNRYTYGALLNCYCKELMTERALALFEKMD 171
+LDLT + + AA+ + L++ YAK+ + Y + +A + + M
Sbjct: 78 NHLDLTGRVVNMNAAKNFL--LTKMPRVYAKSEAALITMFENYVIHSLLSKARLVLKLMK 135
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
E L AFN L +Y + + + ++ +M+ IS + TY + + + D +
Sbjct: 136 EKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKGDTE 195
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL---EEMKPRDRKAYH 288
G+ER+F +M + + LAS YV A EKA LK+ EE + R+ +
Sbjct: 196 GMERLFSKMKCDGDGTPNCEILCTLASGYVNAGDHEKAMAYLKEAVASEEFQ-ESRRVHD 254
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTN-TSYLVLLQALAKLNAIDILKQCFEE 343
+I+LY D ++R+W + FP + SY+ + A K+ ID ++ F E
Sbjct: 255 KVIALYAAMGRADMIDRIWRFTRR-FPVVSANSYVATIAAYEKVGRIDRAEKVFAE 309
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 197/459 (42%), Gaps = 20/459 (4%)
Query: 34 APTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYR 93
P P G E L +R+ SV A+ ++ +G+ V + + + + LR+ +R
Sbjct: 47 GPRDVP-GQEGSLARRVE----RAASVGAAMRGWMADGRAVHRGHVFHAINRLRRHRLHR 101
Query: 94 HALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLN 152
AL+V+EW+ R S D++ L+ TAK +GI+ AE F + + + Y L+
Sbjct: 102 TALQVMEWIVRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRVPQEYQKELLYNNLVM 161
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
+ + + A KM EL + +N L ++ + + + ++ QMK ++
Sbjct: 162 AALDLDLIKHSYAYMRKMRELSLPISPYVYNRLIILHSSPSRRKTISKILYQMKADRVTP 221
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
TY + ++ ++ ++IDG+ RVF +M + + TY LA + A L+
Sbjct: 222 HTSTYNILLKIQANEHNIDGLARVFSDM-KRAKIEPNEITYGILAISHAVARLYTVCHTY 280
Query: 273 LKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKL 331
++ +E M + L+ LY + R W I++ + S+ V ++A K+
Sbjct: 281 VEAIENSMTGTNWSTLEILLILYGYLGKEKELKRTWEIMQDLPHVRSKSFTVAIEAFGKV 340
Query: 332 NAIDILKQCFEEWESRCSSYDMRLAD---VIIRAYLQKDMYEEAALIFNNAKKRANASAR 388
+ID Q + W S+ + L + I+ Y + + ++A+ +F + RAN
Sbjct: 341 GSID---QAEKIWVQIKSTKKLSLTEQFNSILSVYCRHGVVDKASSVFK--EMRANGCQP 395
Query: 389 FFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA 448
+ + L+S + ALN ++ E R ++T E ++
Sbjct: 396 NAITYRHLALGCLKSGLVKEALNTIDMGKKEVVTKKVRSSTPWLETTHLLLENFAEIGDL 455
Query: 449 EEFCKVLKSLNCLDFS----AYSLLIKTYIAAGKLASDM 483
E ++ LN +S Y+ L+K Y+ A D+
Sbjct: 456 ENAKRLYSELNESKYSRNSFVYNTLLKAYVKAKVYEPDL 494
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 188/421 (44%), Gaps = 14/421 (3%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYL 118
V GA ++ +G T+ + L Y + SLRK Y AL+++E++E K+ D+A +
Sbjct: 158 VAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERDYASRV 217
Query: 119 DLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
DL AK +GI AEKY + + Y LL ++ +F KM +L F
Sbjct: 218 DLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVT 277
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFY 238
+ N L +Y R+ + +K+ ++ M++ N+ TY + + + DI+ +E+V
Sbjct: 278 VFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGATRDIEDMEKVIQ 336
Query: 239 EMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNT 297
M + + + +A Y+ EKAE L+++E + +R A F++ LY
Sbjct: 337 AMQADGIEP-DLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLPLYAFL 395
Query: 298 SNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
V R+W + + + ++A KL ++ ++ FE + +
Sbjct: 396 GKKADVERIWKVCEVN--ARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYN 453
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR-ESFMIYYLRSRQLDLALNEMEAA 416
+++ Y K ++++ + AK+ + R S +S + Y + +++ A + +
Sbjct: 454 AMLKVYANKKLFDKGKEL---AKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKA-DSILHK 509
Query: 417 LSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIA 475
LS + +P+ T + ++ DV AE+ F KV + Y LL++ Y+
Sbjct: 510 LSYKNKI--KPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLN 567
Query: 476 A 476
A
Sbjct: 568 A 568
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 25/289 (8%)
Query: 47 YKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR- 105
YK L ++G++ S GAL E + V K ++ ++ L + R+ AL++ WM R
Sbjct: 11 YKDLKSMGSSNNSFNGAL----AEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWMTERL 66
Query: 106 KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALA 165
+H S D A L+L K G+ A +YF+ + + K + YG+LL CY + E+A
Sbjct: 67 HLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEE 126
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD-NLTYIV----- 219
LFEKM + + ++ A+N + +YL+ GQ E+V + M++ I D + T+ +
Sbjct: 127 LFEKMRGMG-MASSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLR 185
Query: 220 ----WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
+ +Y DI +E V E N C + Y + +K AE A ++
Sbjct: 186 KKKTLVAAYVVAEDIKAIENVL-EKANSCN-----SMYMCRIGVLLKMNDMVGAEKAYEE 239
Query: 276 LEEMKP-RDRKAYHFLISLYCNTSNLDAVNRVWG--ILKSTFPPTNTSY 321
E D + + L+ YC +D + I K P NT Y
Sbjct: 240 WESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCY 288
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 194/430 (45%), Gaps = 30/430 (6%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVY 117
V GAL ++ +G T+ + L Y + LR+ Y AL+++E++E K+ D+A
Sbjct: 157 DVAGALKKWLNDGNTLDRSELFYVLLILRRRKLYIKALQLLEYVEESKLIDLGERDYASR 216
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+DL AKT+ I AEKY + + Y LL ++A +F KM +L F
Sbjct: 217 VDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLGFPV 276
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ + N L +Y R+ + +K+ ++ M++ N+ TY + + + DI+ +E+V
Sbjct: 277 SVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVI 335
Query: 238 YEM-CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD----RKAYHFLIS 292
M + E + + +A Y+ EK+E LE+M D R A F++
Sbjct: 336 QAMQADGIEPDLLFQ--ATIARHYIFGGYREKSEAI---LEQMVGDDINENRSACKFVLP 390
Query: 293 LYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAI----DILKQCFEEWESRC 348
LY D V R+W + ++ + ++A KL + +I F+ W++
Sbjct: 391 LYAFLGKNDDVERIWKVCEAN--ARLDECMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLS 448
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK-SRESFMIYYLRSRQLD 407
S Y + +++ Y K ++++ + AK+ + R + +S + Y + +++
Sbjct: 449 SKY----YNAMLKVYANKKLFDKGKEL---AKRMGDDGCRLGPYTLDSLVKLYSDAGEVE 501
Query: 408 LALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAY 466
A + + LS + +PM T + ++ DV AE+ F KV + Y
Sbjct: 502 KA-DSILHKLSYKNKI--KPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQY 558
Query: 467 SLLIKTYIAA 476
LL++ Y+ A
Sbjct: 559 QLLLEAYLNA 568
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 191/431 (44%), Gaps = 9/431 (2%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW-MESRKMHFSYTDFAVY 117
SV A+ ++ +G+ V + + + V LR+ +R AL+V+EW M R S D++
Sbjct: 63 SVCAAIRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYL 122
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
L+ TAK +GI+ AE F + + +N Y L+ + + A KM EL
Sbjct: 123 LEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPI 182
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ +N L ++ G+ + + ++ QMK ++ TY + ++ ++ ++IDGV RVF
Sbjct: 183 SPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVF 242
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCN 296
+M + + TY LA + A L+ + ++ +E M + L+ LY
Sbjct: 243 NDM-KRAKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWSTLEILLILYGY 301
Query: 297 TSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
+ W +++ S+++ ++A K+ +ID ++ + ++ES
Sbjct: 302 HGKAKELKMTWDLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKLTEQF 361
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA 416
+ I+ Y + + ++A+ +F + RAN + + L++ + AL M+ A
Sbjct: 362 NSILSVYCRHGLVDKASAVFK--EMRANGCQPNAITYRHLTLGCLKAGIVKEALKTMDIA 419
Query: 417 LSEAKQFHWR---PMQVTVDTFFRFFEEEKD-VDGAEEFCKVLKSLNCLDFSAYSLLIKT 472
E + P T F E D V+ F ++ +S C + Y+ L+K
Sbjct: 420 KKEVVTKKVKSSTPWLETTHMILESFAENGDLVNAKRVFDELNESKYCRNSFVYNTLLKA 479
Query: 473 YIAAGKLASDM 483
++ A D+
Sbjct: 480 HVKAKVYEPDL 490
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 188/421 (44%), Gaps = 14/421 (3%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYL 118
V GA ++ +G T+ + L Y + SLRK Y AL+++E++E K+ D+A +
Sbjct: 158 VAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERDYASRV 217
Query: 119 DLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
DL AK +GI AEKY + + Y LL ++ +F KM +L F
Sbjct: 218 DLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVT 277
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFY 238
+ N L +Y R+ + +K+ ++ M++ N+ TY + + + DI+ +E+V
Sbjct: 278 VFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQ 336
Query: 239 EMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNT 297
M + + + +A Y+ EKAE L+++E + +R A F++ LY
Sbjct: 337 AMQADGIEP-DLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLPLYAFL 395
Query: 298 SNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
V R+W + + + ++A KL ++ ++ FE + +
Sbjct: 396 GKKADVERIWKVCEVN--ARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYN 453
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR-ESFMIYYLRSRQLDLALNEMEAA 416
+++ Y K ++++ + AK+ + R S +S + Y + +++ A + +
Sbjct: 454 AMLKVYANKKLFDKGKEL---AKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKA-DSILHK 509
Query: 417 LSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIA 475
LS + +P+ T + ++ DV AE+ F KV + Y LL++ Y+
Sbjct: 510 LSYKNKI--KPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLN 567
Query: 476 A 476
A
Sbjct: 568 A 568
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 197/452 (43%), Gaps = 19/452 (4%)
Query: 41 GNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIE 100
G E L +R+ SV A+ ++ +G+ V + + + + LR+ +R AL+V+E
Sbjct: 46 GEEGSLARRVE----RAASVGAAMRGWMADGRAVHRGHVFHAINRLRRHRLHRTALQVME 101
Query: 101 WM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
W+ R S D++ L+ TAK +GI+ AE F + + + Y L+
Sbjct: 102 WIVRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRVPQECRKELLYNNLVMAALDLNH 161
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
+ + A KM EL + +N L ++ G+ + + +++QMK + TY +
Sbjct: 162 IKHSYAYMRKMRELSLPISPYVYNRLIILHSSPGRRKTISKILSQMKADRVVPHTSTYNI 221
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-E 278
++ ++ ++IDG+ RVF M + + TY LA + A L+ ++ +E
Sbjct: 222 LLKIQANEHNIDGLARVFNGM-KRAKIEPNEITYGILAIAHAVARLYTVCHTYVEAIENS 280
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILK 338
M + L+ LY + R W I++ + S+ + ++A K+ +ID
Sbjct: 281 MTGTNWSTLEILLILYGYLGKEKELKRTWEIMQDLPHIRSKSFTLAIEAFGKVGSID--- 337
Query: 339 QCFEEWESRCSSYDMRLAD---VIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRES 395
Q + W S+ + L + ++ Y + + ++A+ +F + RAN +
Sbjct: 338 QAEKIWIHIKSTKKLSLTEQFNSMLSVYCRHGVVDKASSVFK--EMRANGCQPNAITYRH 395
Query: 396 FMIYYLRSRQLDLALNEMEAALSEAKQFHWR---PMQVTVDTFFRFFEEEKDVDGAEE-F 451
+ L+S + ALN ++ E R P T F E D++ A+ +
Sbjct: 396 LALGCLKSGLVKEALNTIDMGKKEVVTKKVRSSTPWLETTHLLLENFAEIGDLENAKRLY 455
Query: 452 CKVLKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
++ +S L+ Y+ L+K Y+ A D+
Sbjct: 456 SELNESKYSLNSFVYNTLLKAYVKAKVYEPDL 487
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 190/423 (44%), Gaps = 16/423 (3%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVY 117
V GA ++ +G T+ + L Y + SLRK Y AL+++E++E K+ D+A
Sbjct: 137 DVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERDYASR 196
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKMDELKFL 176
+DL AK +GI AEKY + + Y LL NC ++ +F KM +L F
Sbjct: 197 VDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIA-NVKKTEQVFNKMKDLGFP 255
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
+ N L +Y R+ + +K+ ++ M++ N+ TY + + + DI+ +E+V
Sbjct: 256 VTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKV 314
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYC 295
M + + + +A Y+ EKAE L+++E + +R A F++ LY
Sbjct: 315 IQAMQADGIEP-DLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLPLYA 373
Query: 296 NTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
V R+W + + + ++A KL ++ ++ FE +
Sbjct: 374 FLGKKADVERIWKVCEVN--ARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEY 431
Query: 356 ADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR-ESFMIYYLRSRQLDLALNEME 414
+ +++ Y K ++++ + AK+ + R S +S + Y + +++ A + +
Sbjct: 432 YNAMLKVYANKKLFDKGKEL---AKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKA-DSIL 487
Query: 415 AALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTY 473
LS + +P+ T + ++ DV AE+ F KV + Y LL++ Y
Sbjct: 488 HKLSYKNKI--KPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAY 545
Query: 474 IAA 476
+ A
Sbjct: 546 LNA 548
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 193/437 (44%), Gaps = 27/437 (6%)
Query: 57 GGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW-MESRKMHFSYTDFA 115
GG V L+ +I EG+ +++ ++ L+ GR++ A E+ +W ++ R + F
Sbjct: 19 GGPVLHILHQWIAEGRESHGEIIA-AMKRLKWLGRFKQAYEISDWVIKERSLELQKFHFI 77
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSE----YAKNRYTYGALLNCYCKELMTERALALFEKMD 171
+L+LT + + AA+ + L++ YAK+ + Y + +A + + M
Sbjct: 78 NHLELTGRVVNMNAAKNFL--LTKMPRVYAKSEAALITMFENYVIHSLLSKARLVLKLMK 135
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
E L AFN L +Y + + + ++ +M+ IS + TY + + + D +
Sbjct: 136 EKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKGDTE 195
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL---EEMKPRDRKAYH 288
G+ER+F +M + + LAS YV A EKA LK+ +E + R+ +
Sbjct: 196 GMERLFSKMKCDGDGTPNGEILCTLASGYVNAGDHEKAMAYLKEAVASDEFR-ESRRVHD 254
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTN-TSYLVLLQALAKLNAIDILKQCFEEWESR 347
+I+LY D ++R+W + FP + SY+ + A K+ ID ++ F E +
Sbjct: 255 KVIALYAAMGRADMIDRIWRFTRR-FPVVSANSYVATIAAYEKVGRIDRAEKVFAELTEK 313
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLD 407
+ + RAY + +A + + N S + Y++S
Sbjct: 314 RTLLRPAHYVPLFRAYCEGGEMGKAEKLLERI-RHGNGHINNL-SYHHLVAGYMKSG--- 368
Query: 408 LALNEMEAALSEAKQFHWR--PMQVTVDTFFRFFEEEKDVDGAEEFCKVLK--SLNCLDF 463
N AA + + F R P TV + + DV+ AE + ++ S N +
Sbjct: 369 ---NPKMAAETLTRMFEERVPPCFDTVMLILKEHAKNADVNSAELLFQDMRRESYNK-NV 424
Query: 464 SAYSLLIKTYIAAGKLA 480
+AY+ L++ Y+ AGK A
Sbjct: 425 AAYNSLLEAYVNAGKHA 441
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 190/430 (44%), Gaps = 17/430 (3%)
Query: 57 GGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW-MESRKMHFSYTDFA 115
G +V AL +++ +G V + + + LRK GR + ALE++EW + R +++
Sbjct: 78 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYS 137
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
L+ T K +G++ EK F + + +N Y L+ + + AL +KM EL +
Sbjct: 138 YLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGY 197
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ + +N L G+ + + + MK + TY + M+ ++ ++IDGV +
Sbjct: 198 RTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLK 257
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR-KAYHFLISLY 294
F M + + +Y LA + A L+ AE +++E+ D L+ LY
Sbjct: 258 AFDGM-KKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILY 316
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ R W +++ + SYL+ +A A++ +D ++ + E ++ +
Sbjct: 317 GRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETE 376
Query: 355 LADVIIRAYLQKDMYEEAALIF----NNAKKRANASARFFK---SRESFMIYYLRSRQLD 407
+ ++ Y + + E+A +F N K + + R ++ M L++ ++
Sbjct: 377 QFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMG 436
Query: 408 LALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFS-AY 466
L L ++ S P T + F E+ DV+ +E+ + +K+ ++ Y
Sbjct: 437 LNLKTSKSIGSST------PWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVY 490
Query: 467 SLLIKTYIAA 476
+ L K Y+ A
Sbjct: 491 NALFKAYVKA 500
>gi|186478941|ref|NP_174121.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332192779|gb|AEE30900.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 388
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 26/300 (8%)
Query: 13 GSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGK 72
G Y ++ L S ++ R A P NE + R+ ALG VT L+ ++ GK
Sbjct: 5 GRYAIKNLLSRRLPSI--RFAGTLTSPKLNETS-HSRIMALGREQKKVTPPLDEWLKRGK 61
Query: 73 TVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAAAE 131
+ +L + SL + R+ HAL+V EW+ R + S DFA L L + G+ AE
Sbjct: 62 DLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLSTEDFASRLCLVEISTGLKEAE 121
Query: 132 KYFNGLSEYAKNRYTYGALLNCYCKELMT-ERALALFEKMDELKFLGNTVAFNNLSTMYL 190
K+F + E ++ + LL+ Y T A A ++ M L + ++ +Y
Sbjct: 122 KFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQNMLLKPYPYYSMIYLYA 181
Query: 191 RLGQPEKVRPLVNQMKQRNISLD-NLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK-- 247
LG+ + ++ QMK+ + D NLT +++Y+ L D++ +E + M E E+
Sbjct: 182 LLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAME--MFLMGLEVEEPRF 239
Query: 248 -CRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
W T ++A Y+K KA L++ E L +T + D+ N+V
Sbjct: 240 SLAWQTGISIAKAYLKGGSSRKAVEMLRRTE---------------LVVDTKSKDSANKV 284
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 198/445 (44%), Gaps = 21/445 (4%)
Query: 42 NEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW 101
E L +RL S A+ ++ G+ V + + + + LR+ +R L+V+EW
Sbjct: 50 QEGSLAQRLE----RASSACAAIRGWMAAGRAVHRGHVFHAINRLRRRRLHRTGLQVMEW 105
Query: 102 -MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL-M 159
+ R S D++ L+ TAK +GI+ AE F + + +N Y L+ C EL +
Sbjct: 106 VIRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRIPQEYRNELLYNNLVMA-CLELSL 164
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
+ + KM EL + +N L ++ G+ + + ++ QMK ++ TY +
Sbjct: 165 IKLSYGYMRKMRELSLPISPYVYNRLIILHSSEGRRKTIPKILAQMKASKVTPHTSTYNI 224
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-E 278
++ ++ ++IDGV RVF +M + + TY LA + A L+ ++ ++ ++
Sbjct: 225 LLKIQANEHNIDGVARVFNDM-KRAKVEPNEITYGILAISHAVARLYTVSQTYIEAIKNS 283
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILK 338
M + L+ LY + W +++ + S+ + ++A K+ +I+
Sbjct: 284 MTGTNWSTQEILLILYGYLGKEKELKMTWKLMQVLPHIRSKSFTLAIEAFGKIGSIE--- 340
Query: 339 QCFEEWESRCSSYDMRLAD---VIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRES 395
Q E W S+ +RL + ++ Y + + ++A+ +F + RA+ +
Sbjct: 341 QAEEIWGEIKSARKLRLTEQFNSMLSVYCRHGVVDKASAVFK--EMRASGCQPNAITYRH 398
Query: 396 FMIYYLRSRQLDLALNEMEAALSEAKQFHWR---PMQVTVDTFFRFFEEEKDVDGAE-EF 451
+ L++ + ALN M+ E R P T F E D++ A+ +
Sbjct: 399 LALGCLKAGLVKQALNTMDMGKKEVVTRKVRNSTPWLETTHMLLENFAEIGDLENAKIVY 458
Query: 452 CKVLKSLNCLDFSAYSLLIKTYIAA 476
++ +S C + Y+ L+K Y+ A
Sbjct: 459 AELNESKYCRNSFVYNTLLKAYVKA 483
>gi|302804432|ref|XP_002983968.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
gi|300148320|gb|EFJ14980.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
Length = 598
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 189/439 (43%), Gaps = 26/439 (5%)
Query: 55 ATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G V +N + G+ K M+ +R L K +Y+ AL+ ++ R D+
Sbjct: 80 VPGHRVASYINWLVDMGEIDSKPMVLSIIRKLTKRQKYKTALDKAFEIDDR-------DY 132
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+ +D A + + AE FN L + K Y +L Y + M E+A+ + +K+ EL
Sbjct: 133 VLQVDYYAHVD-MYLAEMAFNRLPDDKKTEEAYNYILAGYVRNRMLEKAVVVMDKIRELG 191
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN--LTYIVWMQSYSHLNDIDG 232
+ + + ++ ++ LG ++ LV + + + L +W++ D+ G
Sbjct: 192 LV-SAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKRRH--GDLSG 248
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-----PRDRKAY 287
+E + E+ E + TY +AS Y++A EKA AL E + RK Y
Sbjct: 249 MEEIVEEL--ELMGRSNAWTYIFIASAYIQAGFPEKAHAALGAAEAGIRNGRFKKQRKVY 306
Query: 288 HFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES- 346
+ ++ LY +++ + RVWGIL S ++L +++AL I ++ FEE
Sbjct: 307 NKILLLYGLLKDMEGIERVWGILNSRPLVAVHNHLFMIEALGSAGNIGRAEEIFEELRKC 366
Query: 347 RCSSYDMRLADVIIRAYLQKDMYEEAALIFNN--AKKRANASARFFKSRESFMIYYLRSR 404
R + R V+ AY + + ++A + + AK +A + F+ Y++
Sbjct: 367 RGVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARPVPELY---HYFIKGYIKRN 423
Query: 405 QLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFS 464
+ D A+ E S + + T+ + E DV A K K+ D
Sbjct: 424 EKDWAIEAYEEGQSLVRYRSTKLWYETMLEVMSIYAERGDVTSALAMFKHCKACKHRDIR 483
Query: 465 AYSLLIKTYIAAGKLASDM 483
++LL KTY+ A + A +
Sbjct: 484 MFTLLFKTYVVAKEPAHGL 502
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 190/429 (44%), Gaps = 21/429 (4%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW-MESRKMHFSYTDFAV 116
SV A+ ++ +G+ V + + + V LR+ +R AL+V+EW M R S D++
Sbjct: 63 ASVCAAIRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSY 122
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
L+ TAK +GI+ AE F + + +N Y L+ + + A KM EL
Sbjct: 123 LLEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLP 182
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
+ +N L ++ G+ + + ++ QMK ++ TY + ++ ++ ++IDGV RV
Sbjct: 183 ISPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARV 242
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYC 295
F +M + + TY LA + A L+ + ++ +E M + L+ LY
Sbjct: 243 FNDM-KRAKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWSTLEILLILYG 301
Query: 296 NTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
+ W +++ S+++ ++A K+ +ID ++ + ++ES
Sbjct: 302 YHGKAKELKMTWDLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKLTEQ 361
Query: 356 ADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEA 415
+ I+ Y + + ++A+ +F + RAN +E+ + +D+A E+
Sbjct: 362 FNSILSVYCRHGLVDKASAVFK--EMRANGCI----VKEAL-------KTMDIAKKEVVT 408
Query: 416 ALSEAKQFHWRPMQVTVDTFFRFFEEEKD-VDGAEEFCKVLKSLNCLDFSAYSLLIKTYI 474
++ P T F E D V+ F ++ +S C + Y+ L+K ++
Sbjct: 409 KKVKSST----PWLETTHMILESFAENGDLVNAKRVFDELNESKYCRNSFVYNTLLKAHV 464
Query: 475 AAGKLASDM 483
A D+
Sbjct: 465 KAKVYEPDL 473
>gi|302753488|ref|XP_002960168.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
gi|300171107|gb|EFJ37707.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
Length = 585
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 193/442 (43%), Gaps = 32/442 (7%)
Query: 55 ATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G V+ +N + G+ K M+ +R L K +Y+ AL+ ++ R D+
Sbjct: 67 VPGHRVSSYINWLVDMGEIDSKPMVLSIIRKLTKRQKYKTALDKAFEIDDR-------DY 119
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+ +D A + + AE FN L + K Y +L + + M E+A+ + +K+ EL
Sbjct: 120 VLQVDYYAHVD-MYLAEMAFNRLPDDKKTEEAYNYILAGFVRNRMLEKAVVVMDKIRELG 178
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN--LTYIVWMQSYSHLNDIDG 232
+ + + ++ ++ LG ++ LV + + + L +W++ D+ G
Sbjct: 179 LV-SAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKRRH--GDLSG 235
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-----PRDRKAY 287
+E + E+ E + TY +AS Y++A L EKA AL E + RK Y
Sbjct: 236 MEEIVEEL--ELMGRSNAWTYIFIASAYIQAGLPEKAHAALGAAEAGIRNGRFKKQRKVY 293
Query: 288 HFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES- 346
+ ++ LY + + + RVWGIL S ++L +++AL I ++ FEE
Sbjct: 294 NKILLLYGLLKDTEGIERVWGILNSRPLVAVHNHLFMIEALGSAGNIGRAEEIFEELRKC 353
Query: 347 RCSSYDMRLADVIIRAYLQKDMYEEAALIFNN--AKKRANASARFFKSRESFMIYYLRSR 404
R + R V+ AY + + ++A + + AK +A + F+ Y++
Sbjct: 354 RGVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARPVPELY---HYFIKGYIKRN 410
Query: 405 QLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR---FFEEEKDVDGAEEFCKVLKSLNCL 461
+ D A+ E S + +R ++ +T + E DV A K K+
Sbjct: 411 EKDWAIEAYEEGQSLVR---YRSTKLWYETMLEVMSIYAERGDVTSALAMFKHCKACKHR 467
Query: 462 DFSAYSLLIKTYIAAGKLASDM 483
D ++LL KTY+ A + A +
Sbjct: 468 DIRMFTLLFKTYVVAKEPAHGL 489
>gi|302789381|ref|XP_002976459.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
gi|300156089|gb|EFJ22719.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
Length = 509
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 183/431 (42%), Gaps = 23/431 (5%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSYTDFAVYL 118
V A+ +I EG +V L+ VR LR RY AL ++W+ + K + F Y + L
Sbjct: 48 VVPAIKQWIREGNSVTSCGLDRVVRRLRSRKRYLQALMAVDWVANEKVIPFGYHETLQRL 107
Query: 119 DLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEK-MDELKFLG 177
DL ++ + + F L + + Y LL Y K M E A EK M EL+ +G
Sbjct: 108 DLCSRCHHVTRTLLLFRRLPKQWRGEDAYCILLEMYYKRDMLEDA----EKTMQELRGIG 163
Query: 178 --NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY-SHLNDIDGVE 234
+ ++ + + Y G + +V ++K ++LD Y + + + S D+ VE
Sbjct: 164 IKSLQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGGDMVAVE 223
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAY-----HF 289
V EM K +A IY+++ L K+E L++LE+ Y
Sbjct: 224 DVLAEMEGRGL-KLDAVGCLAVAGIYLRSGLRHKSERVLQRLEKSLKSGEFKYSNSIRRR 282
Query: 290 LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS 349
+++++ + DAV+R+W ++ + T ++ ++A ++ +D + + C+
Sbjct: 283 MLAMFGKLGDRDAVDRIWHSIERSASTTVEDFIFGIEAFGRVGKMDEAEDMY--MRVGCN 340
Query: 350 SYDMRLADVIIRAYL-QKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDL 408
S + RL + + + Q D+ AL+ R S + + YL++ +
Sbjct: 341 SCNPRLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTY---HLLIKVYLKAGDVSR 397
Query: 409 ALNEMEAALSEAKQFHW-RPMQVTVDTFFRFFEEEKDVDGAEEFCKV-LKSLNCLDFSAY 466
A E+ S + W RP T+ FF DV +E K ++ L + +
Sbjct: 398 ATLAFESLRSAFGKLEWPRPSSETLAVMLEFFVGTGDVQASERLVKKWMEDGFPLSAAVF 457
Query: 467 SLLIKTYIAAG 477
L++ Y G
Sbjct: 458 HSLVRVYAKGG 468
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 11/266 (4%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVY 117
SV L ++ EGK + + + + LRK Y L++ EW+ + + F+ ++A
Sbjct: 151 SVKHVLEKWVKEGKDLSQAEVSLAIFHLRKRKYYAMCLQLWEWLGANTQFEFTEANYASQ 210
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKMDELKFL 176
LDL AK + + AE + + E + Y LL NC K + +A LF KM ELKF
Sbjct: 211 LDLVAKVHSLQKAENFLKDIPESFRGEVVYRTLLANCVLKHHVN-KAEDLFNKMKELKFP 269
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
+ A N L +Y + +K+ ++ M++ NI TY + S DI G+E++
Sbjct: 270 TSVFACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRGTYQFLINSKGLAGDITGMEKI 328
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK-AYHFLISLYC 295
M E + + LA Y++A L E+A+ +K++E + L+ LY
Sbjct: 329 VETMKEEGIE-VDPELQATLAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYA 387
Query: 296 NTSNLDAVNRVWGILKSTFPPTNTSY 321
+ + D V R+ STF N Y
Sbjct: 388 DIGDSDNVRRL-----STFVDQNLRY 408
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 6/251 (2%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-KMHFSYTDFAVY 117
SV L ++ EGK + + + + +LRK Y L++ EW+ + + F+ ++A
Sbjct: 156 SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQ 215
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKMDELKFL 176
LDL AK + + AE + + E ++ Y LL NC K + +A +F KM ELKF
Sbjct: 216 LDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVN-KAEDIFNKMKELKFP 274
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
+ A N L +Y + +K+ ++ M++ NI TY + S DI G+E++
Sbjct: 275 TSVFACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKI 333
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK-AYHFLISLYC 295
E E + S LA Y++A L E+A+ +K++E + L+ LY
Sbjct: 334 V-ETIKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYA 392
Query: 296 NTSNLDAVNRV 306
+ + D V R+
Sbjct: 393 DIGDSDNVRRL 403
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 191/427 (44%), Gaps = 11/427 (2%)
Query: 57 GGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFA 115
G SV A +++ EG + + + + + LRK + ALEV+EW+ R D++
Sbjct: 69 GESVGYAFQSWMGEGFPIHRGDVFHTINRLRKLRLNKRALEVMEWVVRERPYRLKELDYS 128
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
L+ T K +GI+ EK F + +N Y L+ ++ + +L +KM E
Sbjct: 129 YLLEFTTKHHGISHGEKLFLHVPSEFQNELLYNNLVISCLEKGVIRLSLDYMKKMREQGH 188
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ + FN L ++ G + + ++ QM+ + TY + M+ ++ ++IDG+ +
Sbjct: 189 PISYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIEANEHNIDGLVK 248
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR-KAYHFLISLY 294
VF +M + + ++ LA+ + A L+ AE ++ +E+ D LI LY
Sbjct: 249 VFNDM-KRFKVEPNEVSFCILATAHAAARLYTVAEAYVEAVEKSCSGDNWSTLDVLIILY 307
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ + R WGI+ + SY++ ++A K+ + ++ + E +S
Sbjct: 308 GHLGKEKELERTWGIVLELPHVRSKSYMLAIEAYGKIGQLSRAEELWLEMKSIHGLRSTE 367
Query: 355 LADVIIRAYLQKDMYEEAALIFNNAKKRA-NASARFFKSRESFMIYYLRSRQLDLALN-- 411
+ ++ Y + + ++A F + A++ F+ + L++ ++ AL
Sbjct: 368 QFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFR---HLALGCLKANLVEEALKTL 424
Query: 412 EMEAALSEAKQF-HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFS-AYSLL 469
EM L+ + + + P T + F E+ DV E+ + L + + +++L
Sbjct: 425 EMGKNLTTSNRVKNSTPWLETTLSIIELFAEKGDVVNVEKLFEELAKAKYIRHTFVFNIL 484
Query: 470 IKTYIAA 476
IK Y+ A
Sbjct: 485 IKAYVKA 491
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 148/322 (45%), Gaps = 3/322 (0%)
Query: 57 GGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW-MESRKMHFSYTDFA 115
G +V AL +++ +G V + + + LRK GR + ALE++EW + R +++
Sbjct: 80 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRPGELEYS 139
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
L+ T K +G++ EK F + + +N Y L+ + + AL +KM EL +
Sbjct: 140 YLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGY 199
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ + +N L G+ + + + MK + TY + M+ ++ ++IDGV +
Sbjct: 200 RTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLK 259
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLY 294
F M + + +Y LA + A L+ AE +++E+ + + L+ LY
Sbjct: 260 AFDGM-KKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSVTGNNWSTLDILMILY 318
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ R W +++ + SYL+ +A A++ +D ++ + E ++ +
Sbjct: 319 GRLGKEKELVRTWNVIRGFHHVRSKSYLLATEAFAQVGNLDRAEELWLEMKNVRGLKETE 378
Query: 355 LADVIIRAYLQKDMYEEAALIF 376
+ ++ Y + + E+A +F
Sbjct: 379 QFNSLLSVYCKDGLIEKAIGVF 400
>gi|12322983|gb|AAG51473.1|AC069471_4 hypothetical protein [Arabidopsis thaliana]
Length = 349
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 23/261 (8%)
Query: 52 ALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFS 110
ALG VT L+ ++ GK + +L + SL + R+ HAL+V EW+ R + S
Sbjct: 2 ALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLS 61
Query: 111 YTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMT-ERALALFEK 169
DFA L L + G+ AEK+F + E ++ + LL+ Y T A A ++
Sbjct: 62 TEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQT 121
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD-NLTYIVWMQSYSHLN 228
M L + ++ +Y LG+ + ++ QMK+ + D NLT +++Y+ L
Sbjct: 122 MRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLP 181
Query: 229 DIDGVERVFYEMCNECEDK---CRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK 285
D++ +E + M E E+ W T ++A Y+K KA L++ E
Sbjct: 182 DVEAME--MFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTE-------- 231
Query: 286 AYHFLISLYCNTSNLDAVNRV 306
L +T + D+ N+V
Sbjct: 232 -------LVVDTKSKDSANKV 245
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 5/299 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+R L + G A V + M+SR + + F + + + AE +SE
Sbjct: 123 MRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGV 182
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ YTYGAL+ C+ E A +FEKM N V F L + + G E +
Sbjct: 183 TPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLE 242
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M++R + D +TY + D+ + EM + TY+ L Y
Sbjct: 243 LHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM-RSAGLRPDTVTYTTLIDGY 301
Query: 261 VKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTN 318
K E + A E+ + E D Y LIS RV G ++++ P N
Sbjct: 302 CKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDN 361
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
T+Y +++ A + + + +E +++ + +VI+ + + + A ++ N
Sbjct: 362 TTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLN 420
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/142 (19%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLN 152
A+E+ + M + + + + +K A AE+ + E + TY +++
Sbjct: 310 AMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVID 369
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
+C++ + L L ++M V +N + + +LGQ + L+N M +S
Sbjct: 370 AFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSP 429
Query: 213 DNLTYIVWMQSYSHLNDIDGVE 234
D++TY + + + + +E
Sbjct: 430 DDITYNILLDGHCKHGKVTDIE 451
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 5/299 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+R L + G A V + M+SR + + F + + + AE +SE
Sbjct: 247 MRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGV 306
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ YTYGAL+ C+ E A +FEKM N V F L + + G E +
Sbjct: 307 TPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLE 366
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M++R + D +TY + D+ + EM + TY+ L Y
Sbjct: 367 LHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM-RSAGLRPDTVTYTTLIDGY 425
Query: 261 VKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTN 318
K E + A E+ + E D Y LIS RV G ++++ P N
Sbjct: 426 CKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDN 485
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
T+Y +++ A + + + +E +++ + +VI+ + + + A ++ N
Sbjct: 486 TTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLN 544
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/142 (19%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLN 152
A+E+ + M + + + + +K A AE+ + E + TY +++
Sbjct: 434 AMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVID 493
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
+C++ + L L ++M V +N + + +LGQ + L+N M +S
Sbjct: 494 AFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSP 553
Query: 213 DNLTYIVWMQSYSHLNDIDGVE 234
D++TY + + + + +E
Sbjct: 554 DDITYNILLDGHCKHGKVTDIE 575
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 10/314 (3%)
Query: 60 VTGALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
VT A N + M G+ + D+ Y + SL ++H ++ M + K+ F+
Sbjct: 223 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 282
Query: 117 YLDLTAKTNGIAAAEKYFNG--LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+D K I A + + N TY AL++ +C + + A+ +F+ M
Sbjct: 283 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 342
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ N +++N L Y ++ + +K L +M Q+ + + +TY M H+ +
Sbjct: 343 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAI 402
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLIS 292
+F+EM + TY L K ++A LK +E M P D + Y +I
Sbjct: 403 ALFHEMVAHGQIP-DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP-DIQIYTIVID 460
Query: 293 LYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSY 351
C L+A ++ L S P +Y +++ L + +D + F E + S
Sbjct: 461 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSP 520
Query: 352 DMRLADVIIRAYLQ 365
D + I + LQ
Sbjct: 521 DGCTYNTITQGLLQ 534
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 92/209 (44%), Gaps = 7/209 (3%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N TYG L+N CK T A+ L M++ + V + ++ + Q +
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLA 257
L ++M + IS D TY + S +L + V + +M N D ++T +
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD-- 285
Query: 258 SIYVKAELFEKAELA-LKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFP 315
++ + ++ E ++ + + ++P + Y+ L+ +C S +D +V+ ++ + +
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEP-NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 344
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEW 344
P SY L+ K+ +D FEE
Sbjct: 345 PNVISYNTLINGYCKIQRMDKATYLFEEM 373
>gi|91806413|gb|ABE65934.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 279
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
DKL + + +T L +G V L +++LR + ALE WM
Sbjct: 84 DKLVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMC 143
Query: 104 SRKMHFSYT-DFAVYLDLTAKTNGIAAAEKYF-NGLSEYAKNRYTYGALLNCYCKELMTE 161
+K+ ++ D+A L LT K G+ AE +F + + E K+ Y LL+CY + T+
Sbjct: 144 QKKVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQ 203
Query: 162 -RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
+A A+FEKM EL FN+L ++Y G+ V L+ MK +NI D +T
Sbjct: 204 SKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNV 263
Query: 221 MQSYSHLNDIDGVERV 236
+++ +++ ID +E+V
Sbjct: 264 LRANAYILAIDSMEKV 279
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 291 ISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC-FEEWESRCS 349
+SLY ++ V+RVW K+T N + L+ +L KL ++ + EWE
Sbjct: 1 MSLYGEAGEIEDVHRVWDKYKATRQKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGL 60
Query: 350 SYDMRLADVIIRAYLQKDMYEEAALIFN 377
+D R+ D+++ Y +K M +A + N
Sbjct: 61 EFDNRIPDMLVSGYREKGMVMKADKLVN 88
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 138/297 (46%), Gaps = 7/297 (2%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKN 143
L K G ++ A +V M++R + + F + +++ K + A AE F + + +
Sbjct: 181 LNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPS 240
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
+TY AL+N + +E RA +F ++ + F+ + +N L Y R G P + +
Sbjct: 241 LFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFE 300
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
M + + D+++Y + + ++ I + + Y+ + K ++ L S +VKA
Sbjct: 301 TMLEAGVKADHVSYNILIDAFGRAGLISDAQAI-YDSMKKVGFKPTMKSHILLLSAFVKA 359
Query: 264 ELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTS 320
AE +++LE M +P D ++ L+ Y N+ +D + ++ ++ S P +
Sbjct: 360 GRVTDAENFVRRLESMGVEP-DTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIIT 418
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
L+ A+ I+ ++ F ES+ + D+ ++ AY ++ +Y + ++
Sbjct: 419 LNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQ 475
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 3/237 (1%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
+ L++ Y + A F M + + L +FN L Y R GQ E+ ++++MK
Sbjct: 104 FNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMK 163
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
+ N S +TY +++ + E VF EM N T++ + +IY KA
Sbjct: 164 ESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAV-NTFTLMINIYGKAHHS 222
Query: 267 EKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVL 324
KAE + + + + P Y LI+ + N ++ L+S F P +Y L
Sbjct: 223 AKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNAL 282
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
L+A ++ K+ FE D +++I A+ + + +A I+++ KK
Sbjct: 283 LEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKK 339
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 18/317 (5%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA 130
G+ + ++ + +L + G AL + E + F+ + + A
Sbjct: 208 GRVDKGKLVSAMIGTLGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDA 267
Query: 131 EKYFNGLSEYA--KNRYTYGALLNCYCK-ELMTERALALFEKMDELKFLGNTVAFNNLST 187
F +S + N TY ++++ K E+ + + +++M + + + +N+L +
Sbjct: 268 VDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLS 327
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
+ G E + L+++M R I D TY ++ + ID RVF EM + K
Sbjct: 328 VCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSS----K 383
Query: 248 CRW---TTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL 300
W TYS + Y KA L E AL EEMK R DR +Y+ L+ +Y NL
Sbjct: 384 RVWPNVVTYSAMMDGYAKANLLED---ALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNL 440
Query: 301 D-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
D A+ + + +S +Y LL K D +++ FEE ++R + +
Sbjct: 441 DEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTM 500
Query: 360 IRAYLQKDMYEEAALIF 376
I Y + +M++EA ++
Sbjct: 501 IDMYTKGEMFQEAMDVY 517
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 68 IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
+M + +L C G + A +++ M+ R + + YLD K I
Sbjct: 315 LMPDRLTYNSLLSVCASK----GMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQI 370
Query: 128 AAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
A + F +S N TY A+++ Y K + E AL L+E+M + V++N L
Sbjct: 371 DLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTL 430
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECE 245
+Y +LG ++ +M++ I+ D +TY + Y D V R+F EM
Sbjct: 431 VGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEM----- 485
Query: 246 DKCR-----WTTYSNLASIYVKAELFEKA-----ELALKKLE 277
K R TYS + +Y K E+F++A E + +LE
Sbjct: 486 -KARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLE 526
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 139/315 (44%), Gaps = 16/315 (5%)
Query: 41 GNEDKLYKRLSALGATGGSVTGALNAYI-MEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
G+ + Y + L G A++A+ ME + D + + V + + R A+E
Sbjct: 143 GHSPEPYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSV-VISSLSKKRRAIEAQ 201
Query: 100 EWMESRKMHFSYTDFAVYLDLT---AKTNGIAAAEKYFN--GLSEYAKNRYTYGALLNCY 154
+ +S K F D VY L + I+ AE+ F ++ N YTY +++
Sbjct: 202 SFFDSLKDRFE-PDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDAL 260
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
C+ RA +F +M ++ N + FNNL ++++ G+ EKV + NQMK+ D
Sbjct: 261 CRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDA 320
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
+TY ++S+ ++++ ++ + C ++++ + K A
Sbjct: 321 ITYNFLIESHCRDDNLEEAVKILNSVKKGC--NLNASSFNPIFGCISKLGDVNSAHRMFA 378
Query: 275 KLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKL- 331
K++++K R Y+ L+ ++ + + D V ++ + ++ P +Y VL+ +
Sbjct: 379 KMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIG 438
Query: 332 ---NAIDILKQCFEE 343
NA K+ EE
Sbjct: 439 HWNNAYSFFKEMIEE 453
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 190/451 (42%), Gaps = 38/451 (8%)
Query: 57 GGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALE------------------- 97
G +V AL +++ +G V + + + LRK GR + ALE
Sbjct: 78 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALEMSNLGMLLDRNEFLLMKIL 137
Query: 98 --VIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCY 154
++EW+ R +++ L+ T K +G++ EK F + + +N Y L+
Sbjct: 138 LNLMEWIIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIAC 197
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
+ + AL +KM EL + + + +N L G+ + + + MK +
Sbjct: 198 LDQGVIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHV 257
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
TY + M+ ++ ++IDGV + F M + + +Y LA + A L+ AE +
Sbjct: 258 STYHILMKLEANEHNIDGVLKAFDGM-KKAGVEPNEVSYCILAMAHAVARLYTVAEAYTE 316
Query: 275 KLEEMKPRDR-KAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNA 333
++E+ D L+ LY + R W +++ + SYL+ +A A++
Sbjct: 317 EIEKSITGDNWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGN 376
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF----NNAKKRANASARF 389
+D ++ + E ++ + + ++ Y + + E+A +F N K + + R
Sbjct: 377 LDRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRH 436
Query: 390 FK---SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVD 446
++ M L++ ++ L L ++ S P T + F E+ DV+
Sbjct: 437 LALGCAKAKLMKEALKNIEMGLNLKTSKSIGSST------PWLETTLSIIECFAEKGDVE 490
Query: 447 GAEEFCKVLKSLNCLDFS-AYSLLIKTYIAA 476
+E+ + +K+ ++ Y+ L K Y+ A
Sbjct: 491 NSEKLFEEVKNAKYNRYAFVYNALFKAYVKA 521
>gi|356528212|ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 738
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 6/268 (2%)
Query: 73 TVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEK 132
TV +D + S + G + ++++ + M+ + + + + + A++
Sbjct: 154 TVTEDAFVSLIDSYGRAGIVQESVKLFKKMKELGVDRTVKSYDALFKVILRRGRYMMAKR 213
Query: 133 YFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYL 190
Y+N + R+TY LL L + A+ +E M L + V +N L Y
Sbjct: 214 YYNAMLNESVEPTRHTYNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYF 273
Query: 191 RLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW 250
R + E+ L +MK R+I + +++ ++ Y ID +VF EM C K
Sbjct: 274 RFKKVEEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGQIDDALKVFEEM-KGCGVKPNA 332
Query: 251 TTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW- 307
T+S L AE +A L ++ E + P+D + L+S C +LDA V
Sbjct: 333 VTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNAVFMKLMSCQCKAGDLDAAGDVLK 392
Query: 308 GILKSTFPPTNTSYLVLLQALAKLNAID 335
+++ + P Y VL++ K N D
Sbjct: 393 AMIRLSIPTEAGHYGVLIENFCKANLYD 420
>gi|449466949|ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G ALE++E M+ K+ S F ++ A G AA K + L E + TY
Sbjct: 344 GSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTY 403
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+ +N YC+ + +A +F +M+E F VA+++L +MY + G+ + L+ +MK+
Sbjct: 404 ASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE 463
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAEL 265
+ + Y + M+ + ++ VE+++ EM + DK +Y+++ S YVKA
Sbjct: 464 KGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDK---VSYTSIISAYVKASE 520
Query: 266 FEKAELALKKLEEMKPRDRKAY-HFLISLYCNTSNLD 301
FEK E ++ KA+ ++ ++ TS +D
Sbjct: 521 FEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRVD 557
>gi|449530158|ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G ALE++E M+ K+ S F ++ A G AA K + L E + TY
Sbjct: 344 GSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTY 403
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+ +N YC+ + +A +F +M+E F VA+++L +MY + G+ + L+ +MK+
Sbjct: 404 ASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE 463
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAEL 265
+ + Y + M+ + ++ VE+++ EM + DK +Y+++ S YVKA
Sbjct: 464 KGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDK---VSYTSIISAYVKASE 520
Query: 266 FEKAELALKKLEEMKPRDRKAY-HFLISLYCNTSNLD 301
FEK E ++ KA+ ++ ++ TS +D
Sbjct: 521 FEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRVD 557
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 59 SVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
+V ALN + M+ K +R +++ Y +R L +GR+ A ++ M RK++ + F+
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDEL 173
+D K + AEK ++ + + + + +TY +L+N +C + A +FE M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
N V +N L + + + E+ L +M QR + + +TY +Q D D
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 234 ERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLI 291
+++F +M ++ TYS L K EKA + + L+ +M+P D Y+ +I
Sbjct: 450 QKIFKKMVSDGVPP-DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP-DIYTYNIMI 507
Query: 292 SLYCNTSNLD 301
C ++
Sbjct: 508 EGMCKAGKVE 517
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 161/415 (38%), Gaps = 26/415 (6%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + + D+ Y V L K G AL +++ ME K+ + +D
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A F + N TY +L+ C C A L M E K N V F+
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L +++ G+ + L ++M +R+I D TY + + + +D + +F M ++
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK- 389
Query: 245 EDKC--RWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTS 298
C TY+ L + KA+ + E ++ EM R + Y+ LI
Sbjct: 390 --DCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 299 NLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
+ D +++ ++ PP +Y +LL L K ++ FE + D+ +
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 358 VIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA 416
++I + E+ +F + + K + + + MI + L E +A
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT----MISGFCRKGLK---EEADAL 557
Query: 417 LSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLI 470
E K+ P T +T R + D + E K ++S + D S S++I
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 166/398 (41%), Gaps = 29/398 (7%)
Query: 100 EWMESRKMHFSYTDFAVYLDLTAKTNG----IAAAEKYFNGLSEYAKNRYTYGALLNCYC 155
E ++SR + S +F L AK N I+ E+ N Y + Y+Y L+NC+C
Sbjct: 70 EMVQSRPLP-SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY--DLYSYNILINCFC 126
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM-----KQRNI 210
+ ALA+ KM +L + + V ++L Y + + LV+QM + +
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE 270
+ + L + +++ + + + ++R+ C TY + + K + A
Sbjct: 187 TFNTLIHGLFLHNKAS-EAVALIDRMVARGCQP-----DLFTYGTVVNGLCKRGDIDLAL 240
Query: 271 LALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQAL 328
LKK+E+ K D Y +I CN N+ DA+N + P +Y L++ L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASAR 388
+ + R + ++ +I A++++ EA +++ KR+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 389 FFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDV-DG 447
F S S + + +LD A + E +S+ P VT +T + F + K V +G
Sbjct: 361 FTYS--SLINGFCMHDRLDEAKHMFELMISK----DCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 448 AEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
E F ++ + + Y+ LI+ AG DM Q
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGD--CDMAQ 450
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 132/338 (39%), Gaps = 12/338 (3%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAK 142
L K R + A +V+E ME R + ++ +D KT + A++ F +
Sbjct: 345 GLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP 404
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +L++ +C + AL L E+M L + + +N L + G+ + L
Sbjct: 405 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 464
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
MK + + D +TY + + L ID +F +M + T+S L Y
Sbjct: 465 GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP-DVVTFSTLVEGYCN 523
Query: 263 AELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVWG-ILKSTFPPT 317
A L + AE + LEEM D Y L+ +C + RV + K P
Sbjct: 524 AGLVDDAE---RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPN 580
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y L+ A + + + EE ++ +I + EEA I
Sbjct: 581 VVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILE 640
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEA 415
++ N A F R M R+ ++ AL +EA
Sbjct: 641 RLERDENCKADMFAYR-VMMDGLCRTGRMSAALELLEA 677
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 163/408 (39%), Gaps = 29/408 (7%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVY---LDLTAKTNGIAAAEKYFNGLSE 139
++ L K G A E++E M D A+Y + K A A YF + E
Sbjct: 66 IQGLCKSGDLDKACELLEEMRESG---PVPDAAIYNFVIHALCKARNTAKALDYFRSM-E 121
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
KN T+ +++ CK A F KM + + N +N L + ++ + +
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLA 257
L+ +MK+ ++ + +TY + + +D ++F +M E+ C TY+ L
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV---ENGCMPNLVTYNTLL 238
Query: 258 SIYVKAELFEKA-ELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVW-GILK 311
S + L ++A EL L+EM+ R D+ +Y L++ C T +D +V+
Sbjct: 239 SGLCRNGLMDEAYEL----LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
PP +Y L+ L K +D + FE+ D+ ++ + D +E
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354
Query: 372 AALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVT 431
A + + R N + + S + ++ Q+ A + + + P VT
Sbjct: 355 AQQVLETMEDR-NCTPNVI-TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE----PNVVT 408
Query: 432 VDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGK 478
++ F VD A + + + CL D Y+ LI G+
Sbjct: 409 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 456
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 20/306 (6%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
+ + +L K AL+ ME K ++T + +D K N + A YF + +
Sbjct: 99 FVIHALCKARNTAKALDYFRSMECEKNVITWT---IMIDGLCKANRLPEATTYFAKMKKK 155
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
N +TY L+N +CK RA L ++M E N V ++ + + R + +
Sbjct: 156 GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTA 215
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT---TYSN 255
L QM + + +TY + +G+ YE+ +E ++ +Y
Sbjct: 216 YKLFRQMVENGCMPNLVTYNTLLSGLCR----NGLMDEAYELLDEMRERGLQPDKFSYDT 271
Query: 256 LASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
L + K K ++ALK E+ P D AY LI+ C LD +++ ++
Sbjct: 272 LMAGLCKT---GKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMR 328
Query: 312 -STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYE 370
++ P ++ L+ L K + + +Q E E R + ++ +I +
Sbjct: 329 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 388
Query: 371 EAALIF 376
+A +F
Sbjct: 389 DAQEVF 394
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 59 SVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
+V ALN + M+ K +R +++ Y +R L +GR+ A ++ M RK++ + F+
Sbjct: 254 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 313
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDEL 173
+D K + AEK ++ + + + + +TY +L+N +C + A +FE M
Sbjct: 314 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 373
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
N V +N L + + + E+ L +M QR + + +TY +Q D D
Sbjct: 374 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 433
Query: 234 ERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLI 291
+++F +M ++ TYS L K EKA + + L+ +M+P D Y+ +I
Sbjct: 434 QKIFKKMVSDGVPP-DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP-DIYTYNIMI 491
Query: 292 SLYCNTSNLD 301
C ++
Sbjct: 492 EGMCKAGKVE 501
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 161/415 (38%), Gaps = 26/415 (6%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + + D+ Y V L K G AL +++ ME K+ + +D
Sbjct: 195 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 254
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A F + N TY +L+ C C A L M E K N V F+
Sbjct: 255 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 314
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L +++ G+ + L ++M +R+I D TY + + + +D + +F M ++
Sbjct: 315 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK- 373
Query: 245 EDKC--RWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTS 298
C TY+ L + KA+ + E ++ EM R + Y+ LI
Sbjct: 374 --DCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 428
Query: 299 NLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
+ D +++ ++ PP +Y +LL L K ++ FE + D+ +
Sbjct: 429 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 488
Query: 358 VIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA 416
++I + E+ +F + + K + + + MI + L E +A
Sbjct: 489 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT----MISGFCRKGLK---EEADAL 541
Query: 417 LSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLI 470
E K+ P T +T R + D + E K ++S + D S S++I
Sbjct: 542 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 596
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 166/398 (41%), Gaps = 29/398 (7%)
Query: 100 EWMESRKMHFSYTDFAVYLDLTAKTNG----IAAAEKYFNGLSEYAKNRYTYGALLNCYC 155
E ++SR + S +F L AK N I+ E+ N Y + Y+Y L+NC+C
Sbjct: 54 EMVQSRPLP-SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY--DLYSYNILINCFC 110
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM-----KQRNI 210
+ ALA+ KM +L + + V ++L Y + + LV+QM + +
Sbjct: 111 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 170
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE 270
+ + L + +++ + + + ++R+ C TY + + K + A
Sbjct: 171 TFNTLIHGLFLHNKAS-EAVALIDRMVARGCQP-----DLFTYGTVVNGLCKRGDIDLAL 224
Query: 271 LALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQAL 328
LKK+E+ K D Y +I CN N+ DA+N + P +Y L++ L
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASAR 388
+ + R + ++ +I A++++ EA +++ KR+
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344
Query: 389 FFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDV-DG 447
F S S + + +LD A + E +S+ P VT +T + F + K V +G
Sbjct: 345 FTYS--SLINGFCMHDRLDEAKHMFELMISK----DCFPNVVTYNTLIKGFCKAKRVEEG 398
Query: 448 AEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
E F ++ + + Y+ LI+ AG DM Q
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGD--CDMAQ 434
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 139/316 (43%), Gaps = 11/316 (3%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKN 143
L K GR A + M+ + + + F + +++ K A+ F + + N
Sbjct: 172 LGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPN 231
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
YTY AL+N + +E RA +F ++ + F+ + +N L Y R P + +
Sbjct: 232 LYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQ 291
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
M + + D ++Y + + ++ + + Y+ E K ++ L S Y KA
Sbjct: 292 AMVEAGVRPDQVSYNILIDAFGRAG-LTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKA 350
Query: 264 ELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTS 320
+AE ++++E +KP D ++ L+S Y N+ +D + + ++ S P ++
Sbjct: 351 GKVTEAERLVREIENSGVKP-DTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDIST 409
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
L+ A A+ I+ ++ F ES+ + D+ ++ AY Q+ ++ + IF
Sbjct: 410 LNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMV 469
Query: 381 KRA----NASARFFKS 392
K A+A+ F S
Sbjct: 470 KAGCIPDRATAKVFLS 485
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 137/343 (39%), Gaps = 19/343 (5%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
+ L++ Y K A F M + + L +FN L Y R Q EK L ++MK
Sbjct: 86 FNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMK 145
Query: 207 QRNISLDNL---------TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+ N S + TY +++ + E F +M + T++ +
Sbjct: 146 ESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAV-NTFTIMI 204
Query: 258 SIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FP 315
+IY KA +KA+ + + + + P + Y L++ + N ++ L+S F
Sbjct: 205 NIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFI 264
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P +Y LL+A ++ K+ F+ D +++I A+ + + +A +
Sbjct: 265 PDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAV 324
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTF 435
+++ K+ A F + +S M+ L S + E E + E + +P ++
Sbjct: 325 YDSMKE-----AGFKPTMKSHML-LLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSL 378
Query: 436 FRFFEEEKDVDGAEEFCK-VLKSLNCLDFSAYSLLIKTYIAAG 477
+ +D E + ++ S+ D S + LI Y G
Sbjct: 379 LSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGG 421
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 21/235 (8%)
Query: 101 WMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
WM R +H S D A L+L K G+ A +YF+ + + K + YG+LL CY +
Sbjct: 33 WMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANC 92
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD-NLTYI 218
E+A LFEKM + + ++ A+N + +YL+ GQ E+V + M++ I D + T+
Sbjct: 93 VEKAEELFEKMRGMG-MASSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHT 151
Query: 219 V---------WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ + +Y DI +E V E N C + Y + +K A
Sbjct: 152 LVAVLRKKKTLVAAYVVAEDIKAIENVL-EKANSCN-----SMYMCRIGVLLKMNDMVGA 205
Query: 270 ELALKKLEEMKP-RDRKAYHFLISLYCNTSNLDAVNRVWG--ILKSTFPPTNTSY 321
E A ++ E D + + L+ YC +D + I K P NT Y
Sbjct: 206 EKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCY 260
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 44/272 (16%)
Query: 253 YSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
Y +L Y +A EKAE +K+ M AY+ ++ LY ++ V+ + ++
Sbjct: 80 YGSLLKCYAEANCVEKAEELFEKMRGMGMASSYAYNVMMRLYLQNGQVERVHSMHQAMEE 139
Query: 313 T--FPPTNTS---------------------------------------YLVLLQALAKL 331
+ P +T+ Y+ + L K+
Sbjct: 140 SGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKM 199
Query: 332 NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK 391
N + ++ +EEWES+ +D RL ++++ AY ++ + ++A + + K+ F
Sbjct: 200 NDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMP--FAN 257
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
+ Y + Q+ A + + AL+ A W P V +F E+K+V+ AEE
Sbjct: 258 TCYKLAGGYFKVGQVSKAADLTKKALASASN-EWIPDLTNVLMSLNYFAEQKNVEAAEEM 316
Query: 452 CKVLKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
+L+ L Y L+KTY+ AGK SD+
Sbjct: 317 MSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDL 348
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 132/338 (39%), Gaps = 12/338 (3%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAK 142
L K R + A +V+E ME R + ++ +D KT + A++ F +
Sbjct: 226 GLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP 285
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +L++ +C + AL L E+M L + + +N L + G+ + L
Sbjct: 286 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 345
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
MK + + D +TY + + L ID +F +M + T+S L Y
Sbjct: 346 GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP-DVVTFSTLVEGYCN 404
Query: 263 AELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPT 317
A L + AE + LEEM D Y L+ +C + RV + K P
Sbjct: 405 AGLVDDAE---RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPN 461
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y L+ A + + + EE ++ +I + EEA +
Sbjct: 462 VVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLE 521
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEA 415
++ N A F R M R+ ++ AL +EA
Sbjct: 522 RLERDENCKADMFAYR-VMMDGLCRTGRMSAALELLEA 558
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 141/349 (40%), Gaps = 22/349 (6%)
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
E KN T+ +++ CK A F KM + + N +N L + ++ + +
Sbjct: 2 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNL 256
L+ +MK+ ++ + +TY + + +D ++F +M E+ C TY+ L
Sbjct: 62 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV---ENGCMPNLVTYNTL 118
Query: 257 ASIYVKAELFEKA-ELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S + L ++A EL L+EM+ R D+ +Y L++ C T +D +V+
Sbjct: 119 LSGLCRNGLMDEAYEL----LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 174
Query: 311 KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYE 370
PP +Y L+ L K +D + FE+ D+ ++ + D +
Sbjct: 175 NGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 234
Query: 371 EAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQV 430
EA + + R N + + S + ++ Q+ A + + + P V
Sbjct: 235 EAQQVLETMEDR-NCTPNVI-TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE----PNVV 288
Query: 431 TVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGK 478
T ++ F VD A + + + CL D Y+ LI G+
Sbjct: 289 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 337
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 20/285 (7%)
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELM 159
ME K ++T + +D K N + A YF + + N +TY L+N +CK
Sbjct: 1 MECEKNVITWT---IMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 57
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
RA L ++M E N V ++ + + R + + L QM + + +TY
Sbjct: 58 VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT 117
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWT---TYSNLASIYVKAELFEKAELALKKL 276
+ +G+ YE+ +E ++ +Y L + K K ++ALK
Sbjct: 118 LLSGLCR----NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKT---GKIDMALKVF 170
Query: 277 EEMK----PRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKL 331
E+ P D AY LI+ C T LD +++ ++ ++ P ++ L+ L K
Sbjct: 171 EDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKG 230
Query: 332 NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ + +Q E E R + ++ +I + +A +F
Sbjct: 231 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVF 275
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 143/385 (37%), Gaps = 45/385 (11%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S A N TY +++ +C++ + A LF +M E + N V +N L + R G ++
Sbjct: 71 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 130
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-EC------------ 244
L+++M++R + D +Y M ID +VF + N +C
Sbjct: 131 AYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIA 190
Query: 245 -------------------EDKCR--WTTYSNLASIYVKAELFEKAELALKKLEEMK-PR 282
E+ C T++ L K + ++A+ L+ +E+
Sbjct: 191 GLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 250
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ Y LI C T + V+ ++ P +Y L+ N +D
Sbjct: 251 NVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLM 310
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR-ANASARFFKSRESFMIYY 400
EE + D+ + +I + EA +F + K + N + + +
Sbjct: 311 EEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS---CLIGGF 367
Query: 401 LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC 460
+ ++D+A + L +A P VT T + VD AE + + + +C
Sbjct: 368 CKLERIDMARTLFDDMLKQA----VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423
Query: 461 -LDFSAYSLLIKTYIAAGKLASDMR 484
D Y+ L+ + G++ R
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARR 448
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 169/391 (43%), Gaps = 22/391 (5%)
Query: 94 HALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL- 151
H L+++E++E K+ D+A +DL AK +GI AEKY + + Y LL
Sbjct: 7 HFLQLLEYVEESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLA 66
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
NC ++ +F KM +L F + N L +Y R+ + +K+ ++ M++ N+
Sbjct: 67 NCVAIA-NVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVK 124
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
TY + + + DI+ +E+V M + + + +A Y+ EKAE
Sbjct: 125 PSLFTYKLLVDTKGAARDIEDMEKVIQAMQADGIEP-DLLIQATIARHYIFGGYREKAEA 183
Query: 272 ALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAK 330
L+++E + +R A F++ LY V R+W + + + ++A K
Sbjct: 184 ILEQIEGDDINENRSACKFVLPLYAFLGKKADVERIWKVCEVN--ARLDECMSAIEAFGK 241
Query: 331 LNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFF 390
L ++ ++ FE + + +++ Y K ++++ + AK+ + R
Sbjct: 242 LGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKEL---AKRMGDDGCRLG 298
Query: 391 KSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHW----RPMQVTVDTFFRFFEEEKDVD 446
S ++ +L E+E A S + + +P+ T + ++ DV
Sbjct: 299 PSTLDSLV------KLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVH 352
Query: 447 GAEE-FCKVLKSLNCLDFSAYSLLIKTYIAA 476
AE+ F KV + Y LL++ Y+ A
Sbjct: 353 NAEKLFSKVRQMGYTGRIRQYQLLLEAYLNA 383
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 115/238 (48%), Gaps = 7/238 (2%)
Query: 130 AEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
AE F L E + + TY +LL + KE ER + E++ + F + + +N +
Sbjct: 120 AELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 179
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
MY ++G+ + L ++M+ + D +TY V + S ++ I +V EM + K
Sbjct: 180 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL-K 238
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNR 305
T+S L Y K+ + AE ++ E +KP DR AY ++ ++ + +
Sbjct: 239 PTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKP-DRLAYLVMLDVFARSDETRKLMV 297
Query: 306 VW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
++ ++K + P + Y VLL ALAK N D ++ ++ E+ + ++ ++I+A
Sbjct: 298 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKA 355
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 118/268 (44%), Gaps = 25/268 (9%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA-------EKYFNGLSEYAK 142
GR+ A ++++ M + + F ++ AK+ +AA E GL A
Sbjct: 8 GRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDA- 66
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
TY L++ + + A+A+FE+M + + +N + +++ R G+ ++ +
Sbjct: 67 --ITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMF 124
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++ ++ D +TY + +++ D++ VERV E+ K TY+ + +Y K
Sbjct: 125 KELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRK-DGITYNTMIHMYGK 183
Query: 263 AELFEKAELALKKLEEMKP----RDRKAYHFLISLYCNTSNLDAVNRVWGILK----STF 314
+ +LAL +EM+ D Y L+ + +D ++ +L+ +
Sbjct: 184 ---MGRLDLALGLYDEMRAIGCTPDAVTYTVLVD---SLGKMDRISEAGKVLEEMADAGL 237
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFE 342
PT ++ L+ A AK D ++ F+
Sbjct: 238 KPTLVTFSALICAYAKSGRQDDAERTFD 265
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 21/235 (8%)
Query: 101 WMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
WM R +H S D A L+L K G+ A +YF+ + + K + YG+LL CY +
Sbjct: 2 WMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANC 61
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD-NLTYI 218
E+A LFEKM + + ++ A+N + +YL+ GQ E+V + M++ I D + T+
Sbjct: 62 VEKAEELFEKMRGMG-MASSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHT 120
Query: 219 V---------WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ + +Y DI +E V E N C + Y + +K A
Sbjct: 121 LVAVLRKKKTLVAAYVVAEDIKAIENVL-EKANSCN-----SMYMCRIGVLLKMNDMVGA 174
Query: 270 ELALKKLEEMKP-RDRKAYHFLISLYCNTSNLDAVNRVWG--ILKSTFPPTNTSY 321
E A ++ E D + + L+ YC +D + I K P NT Y
Sbjct: 175 EKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCY 229
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 44/272 (16%)
Query: 253 YSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
Y +L Y +A EKAE +K+ M AY+ ++ LY ++ V+ + ++
Sbjct: 49 YGSLLKCYAEANCVEKAEELFEKMRGMGMASSYAYNVMMRLYLQNGQVERVHSMHQAMEE 108
Query: 313 T--FPPTNTS---------------------------------------YLVLLQALAKL 331
+ P +T+ Y+ + L K+
Sbjct: 109 SGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKM 168
Query: 332 NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK 391
N + ++ +EEWES+ +D RL ++++ AY ++ + ++A + + K+ F
Sbjct: 169 NDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMP--FAN 226
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
+ Y + Q+ A + + AL+ A W P V +F E+K+V+ AEE
Sbjct: 227 TCYKLAGGYFKVGQVSKAADLTKKALASASN-EWIPDLTNVLMSLNYFAEQKNVEAAEEM 285
Query: 452 CKVLKSLNCLDFSAYSLLIKTYIAAGKLASDM 483
+L+ L Y L+KTY+ AGK SD+
Sbjct: 286 MSLLQRLVTPTRDIYHGLLKTYVNAGKPVSDL 317
>gi|297746078|emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 57 GGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFA 115
G V A +++ EG + + + + + LRK + ALEV+EW+ R D++
Sbjct: 70 GEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYS 129
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
L+ T K +GI+ EK F+ + +N Y L+ + + +LA +KM EL
Sbjct: 130 YLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGH 189
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ + FN L ++ + + + ++ QMK ++ TY + M+ ++ ++I+G+ +
Sbjct: 190 PISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVK 249
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
VF EM + + +Y LA+ + A+L+ AE ++ +E+
Sbjct: 250 VFGEMKQQQVEPNE-VSYCLLATAHAVAKLYTVAEAYVEAVEK 291
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQC 340
R Y+ L+ + N N++ + +V+G +K P SY +L A A + +
Sbjct: 226 RHVSTYNILMKIEANEHNIEGLVKVFGEMKQQQVEPNEVSYCLLATAHAVAKLYTVAEAY 285
Query: 341 FEEWESRCSSYDMRLADVII--RAYLQKDMYEEAALIFNNAKKRA--NASARF-----FK 391
E E + + DV+I YL K E L+ N KKR N + +F F+
Sbjct: 286 VEAVEKSITGNNWSTLDVLIILYGYLGKPTDLEP-LVRNKVKKRVEINRAIQFNDICLFQ 344
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
+ E+ L++ +L L + K W ++ T+ + F E DV+ AE+
Sbjct: 345 TWEA-----LKTLELGKGLT---ISTRIRKSIPW--LETTL-SIVEIFSENGDVENAEKL 393
Query: 452 CKVLKSLNCLDFS-AYSLLIKTYIAA 476
+ LK+ N ++ Y+ LIK Y+ A
Sbjct: 394 FEELKTANYTRYTFVYNTLIKAYVKA 419
>gi|302817236|ref|XP_002990294.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
gi|300141856|gb|EFJ08563.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
Length = 1139
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 125/255 (49%), Gaps = 8/255 (3%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAKN 143
L K GRY A++V M+ +++ S +A L + K + A F+ + +
Sbjct: 422 LGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVD 481
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
Y ++++ Y K + + A LF++M+EL+ L + F+ ++ + L+ G+ + ++
Sbjct: 482 EVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVME 541
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
++ + ++LD++ + + Y +++ + F + Y+++ S+Y +
Sbjct: 542 ELLAKGLNLDDMAWKTLLHCYVKAGNVERATKTFKTLVE--SGIADLMAYNDVLSLYAEF 599
Query: 264 ELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTS 320
++ E A+L ++L+ ++P D+ + ++ LYCN + + A V ++ F P + +
Sbjct: 600 DMLEDAKLLFQQLKSSSIQP-DQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHIT 658
Query: 321 YLVLLQALAKLNAID 335
+L+ A + N I+
Sbjct: 659 QGILINAYGEANRIE 673
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTY 147
GR + A++ + + + S + + + AK+ AEK F L + + + Y
Sbjct: 875 GRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVY 934
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
++NCY K M E A LFE M + V++NNL Y R GQ K L+ +M +
Sbjct: 935 SQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAK 994
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
++T+++ + +Y+H CNE E+
Sbjct: 995 AGCPPSSVTFLLLISAYAHRGK-----------CNEAEN 1022
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 160/437 (36%), Gaps = 67/437 (15%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA-KNRYT 146
K G+Y A++V+E + ++ ++ + L K + A K F L E +
Sbjct: 529 KAGKYNEAVQVMEELLAKGLNLDDMAWKTLLHCYVKAGNVERATKTFKTLVESGIADLMA 588
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +L+ Y + M E A LF+++ + V F + +Y ++ QM+
Sbjct: 589 YNDVLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMR 648
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV--KAE 264
++ + D++T + + +Y N I+ + E E + + ++ IY+ K
Sbjct: 649 EKGFTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEA-----AAISRIYLCLKFR 703
Query: 265 LFEKAELALKKLEEMKPRDRKAYH-----------------------------------F 289
LF+KA L L ++ E D AY+
Sbjct: 704 LFDKATLLLHRVLESFTLDSAAYNQLTINFLKAGQVLPAEMLHSRMQDKGFDVEDSTLGH 763
Query: 290 LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS 349
LI+ Y + + R LK P N Y ++ AL N ++ E+
Sbjct: 764 LIAAYGKAGRYEVLTR----LKPELPRNNFVYSSMVGALINCNQLEEAAGLVEKMRQIGL 819
Query: 350 SYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKS-----RESFMIYYLRSR 404
D L +++ AY + E+ F S R++ + + ++ Y
Sbjct: 820 KCDSVLVSILLNAYSKAG--EQKIFSF---------SGRWYPAGYCCLQHDHIVAYNTII 868
Query: 405 QLDLALNEMEAAL---SEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+ DL ++ A+ S RP T DT F + AE+ K LKS
Sbjct: 869 KADLRPGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQ 928
Query: 462 -DFSAYSLLIKTYIAAG 477
D YS ++ Y +G
Sbjct: 929 PDEKVYSQMMNCYAKSG 945
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 115/238 (48%), Gaps = 7/238 (2%)
Query: 130 AEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
AE F L E + + TY +LL + KE ER + E++ + F + + +N +
Sbjct: 347 AELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 406
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
MY ++G+ + L ++M+ + D +TY V + S ++ I +V EM + K
Sbjct: 407 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMAD-AGLK 465
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNR 305
T+S L Y K+ + AE ++ E +KP DR AY ++ ++ + +
Sbjct: 466 PTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKP-DRLAYLVMLDVFARSDETRKLMV 524
Query: 306 VW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
++ ++K + P + Y VLL ALAK N D ++ ++ E+ + ++ ++I+A
Sbjct: 525 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKA 582
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 127/290 (43%), Gaps = 31/290 (10%)
Query: 70 EGKTVR--KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
EG TV+ M+ RS GR+ A ++++ M + + F ++ AK+ +
Sbjct: 217 EGATVQVFNAMMGVYARS----GRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCL 272
Query: 128 AAA-------EKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
AA E GL A TY L++ + + A+A+FE+M + +
Sbjct: 273 AAGVALELLHEVRQAGLRPDA---ITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLW 329
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+N + +++ R G+ ++ + ++ ++ D +TY + +++ D++ VERV E+
Sbjct: 330 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 389
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP----RDRKAYHFLISLYCN 296
K TY+ + +Y K + +LAL +EM+ D Y L+ +
Sbjct: 390 VKAGFRK-DGITYNTMIHMYGK---MGRLDLALGLYDEMRAIGCTPDAVTYTVLVD---S 442
Query: 297 TSNLDAVNRVWGILK----STFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
+D ++ +L+ + PT ++ L+ A AK D ++ F+
Sbjct: 443 LGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFD 492
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 104/252 (41%), Gaps = 11/252 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+R+L GR V++ ++ + S + + L+ AK + K +NG+ + Y
Sbjct: 824 MRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGY 883
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N + Y +++ C + +M+ F + V N L MY G ++
Sbjct: 884 LPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIE 943
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ + + + + D TY + YS + + YEM + +Y L +
Sbjct: 944 VYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTP-KLESYKILLAAS 1002
Query: 261 VKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-STFP 315
KA+L+E+A+L EEM+ + +R YH ++ +Y N N + +K
Sbjct: 1003 GKAKLWEQADLL---FEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIE 1059
Query: 316 PTNTSYLVLLQA 327
PT + +L+ +
Sbjct: 1060 PTIATMHILMTS 1071
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 6/249 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +++ CK++ + A+ L +M + N +N+L +LGQ EKV+ L+++M
Sbjct: 205 TYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM 264
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
NI+ + T+ + + ++ + V M + + TYS + Y
Sbjct: 265 VNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEP-DIITYSAIMDGYCLRGQ 323
Query: 266 FEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYL 322
++A L + +KP + +Y LI+ YC NL +++G I + P +Y
Sbjct: 324 VDRARRVFNVLRDKGIKP-NIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYS 382
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK- 381
+L L ++ I K+ F+E + D+ L ++ Y + + EEA L+F+ ++
Sbjct: 383 TILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERN 442
Query: 382 RANASARFF 390
R + + F+
Sbjct: 443 REDTNISFY 451
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 124/315 (39%), Gaps = 44/315 (13%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ K + ++ Y + L K G++ ++ M + ++ + F++ +D K
Sbjct: 229 MKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGK 288
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A++ + E + TY A+++ YC +RA +F + + N +++
Sbjct: 289 VEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CN 242
L Y + K L ++ Q+ + D +TY + + I +++F EM
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDA 302
D C +S L Y K L E+A L KLE R+R+
Sbjct: 409 PTPDIC---LHSTLLFGYFKYGLVEEAMLLFSKLE----RNRED---------------- 445
Query: 303 VNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
TN S Y V++ L K + + FE+ S D+R +V+I
Sbjct: 446 --------------TNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMIT 491
Query: 362 AYLQKDMYEEAALIF 376
+ ++ +++E I
Sbjct: 492 GFCREGLFDEVKGIL 506
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y ++N CK A A+FEK+ + + + +N + T + R G ++V+ ++ +M+
Sbjct: 451 YTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKME 510
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+N+TY V MQ + N I + EM
Sbjct: 511 DNGCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 145/369 (39%), Gaps = 28/369 (7%)
Query: 22 STPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEY 81
S + VS I F G DK Y +G + VT I++G
Sbjct: 188 SCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVT---YNTIIDG---------- 234
Query: 82 CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA 141
L K A +V + M + + + + +D K + AE F + +
Sbjct: 235 ----LCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKG 290
Query: 142 --KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ TY +++ CK +RA +F++M + + V +N + + +K
Sbjct: 291 VKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAE 350
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+ QM + + DNLTY + + +D E VF +M ++ K TY+ L
Sbjct: 351 GVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDK-GVKPNNGTYNCLIHG 409
Query: 260 YVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVW-GILKSTF 314
Y+ +E+ +++++EM D + Y L+ C + ++ +++
Sbjct: 410 YLSTGQWEE---VVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGI 466
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P+ T Y ++L K A+ + + S + R+ + +I AY ++ M +E
Sbjct: 467 KPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMH 526
Query: 375 IFNNAKKRA 383
IF K++
Sbjct: 527 IFIKMKQQG 535
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 146/370 (39%), Gaps = 17/370 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKN 143
L K G+ A + + M + + S T + + L K ++ N + + + N
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
+ ++ Y K M + + +F KM + N V + L +LG+ + N
Sbjct: 505 HRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFN 564
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC--EDKCRWTTYSNLASIYV 261
QM ++ +N+ + + ++ + VE +F EM N+ D + T L ++
Sbjct: 565 QMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTV--LCNLCK 622
Query: 262 KAELFEKAELALKKL-EEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNT 319
+ + E L + +KP D +Y+ LI +C S +D AV + G++ + P
Sbjct: 623 EGRVMEARRLIDSMVCMGLKP-DVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIV 681
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
SY LL K ID F E + + + + I+ + + EA ++ N
Sbjct: 682 SYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNM 741
Query: 380 KKRANASARFFKSRESFMIY---YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
K +R S ++ I + ++ D A ++ S Q + +D F
Sbjct: 742 IK-----SRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLF 796
Query: 437 RFFEEEKDVD 446
+ +E +D
Sbjct: 797 KGGRKEDAMD 806
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 6/179 (3%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + +R D++ + + +L K GR A +I+ M + + +D +
Sbjct: 601 MLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASR 660
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A K +G+ + N +Y LL+ YCK + A LF +M +N
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNT 720
Query: 185 LSTMYLRLGQPEKVRPL-VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
+ R G+ + R L VN +K R + TY + + + N D ++F +C+
Sbjct: 721 ILNGLFRSGRFSEARELYVNMIKSRKL-WSICTYSIILDGFCKNNCFDEAFKIFQSLCS 778
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 115/238 (48%), Gaps = 7/238 (2%)
Query: 130 AEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
AE F L E + + TY +LL + KE ER + E++ + F + + +N +
Sbjct: 187 AELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 246
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
MY ++G+ + L ++M+ + D +TY V + S ++ I +V EM + K
Sbjct: 247 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMAD-AGLK 305
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNR 305
T+S L Y K+ + AE ++ E +KP DR AY ++ ++ + +
Sbjct: 306 PTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKP-DRLAYLVMLDVFARSDETRKLMV 364
Query: 306 VW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
++ ++K + P + Y VLL ALAK N D ++ ++ E+ + ++ ++I+A
Sbjct: 365 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKA 422
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 104/252 (41%), Gaps = 11/252 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+R+L GR V++ ++ + S + + L+ AK + K +NG+ + Y
Sbjct: 664 MRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGY 723
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N + Y +++ C + +M+ F + V N L MY G ++
Sbjct: 724 LPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIE 783
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ + + + + D TY + YS + + YEM + +Y L +
Sbjct: 784 VYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTP-KLESYKILLAAS 842
Query: 261 VKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-STFP 315
KA+L+E+A+L EEM+ + +R YH ++ +Y N N + +K
Sbjct: 843 GKAKLWEQADLL---FEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIE 899
Query: 316 PTNTSYLVLLQA 327
PT + +L+ +
Sbjct: 900 PTIATMHILMTS 911
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 118/268 (44%), Gaps = 25/268 (9%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA-------EKYFNGLSEYAK 142
GR+ A ++++ M + + F ++ AK+ +AA E GL A
Sbjct: 75 GRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDA- 133
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
TY L++ + + A+A+FE+M + + +N + +++ R G+ ++ +
Sbjct: 134 --ITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMF 191
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++ ++ D +TY + +++ D++ VERV E+ K TY+ + +Y K
Sbjct: 192 KELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRK-DGITYNTMIHMYGK 250
Query: 263 AELFEKAELALKKLEEMKP----RDRKAYHFLISLYCNTSNLDAVNRVWGILK----STF 314
+ +LAL +EM+ D Y L+ + +D ++ +L+ +
Sbjct: 251 ---MGRLDLALGLYDEMRAIGCTPDAVTYTVLVD---SLGKMDRISEAGKVLEEMADAGL 304
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFE 342
PT ++ L+ A AK D ++ F+
Sbjct: 305 KPTLVTFSALICAYAKSGRQDDAERTFD 332
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME K +R D+ Y + L +GR+ A ++ M RK++ + F+ +D K
Sbjct: 281 METKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGK 340
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ AEK ++ + + + + +TY +L+N +C + A +FE M N V +N
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + + + E+ L +M QR + + +TY +Q D D +++F +M ++
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLD 301
TYS L K EKA + + L+ +M+P D Y+ +I C ++
Sbjct: 461 VPP-DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP-DIYTYNIMIEGMCKAGKVE 517
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 130/319 (40%), Gaps = 17/319 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + + D++ Y V L K G AL +++ ME K+ + +D K
Sbjct: 211 MVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 270
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I A FN + + +TY +L++C C A L M E K N V F+
Sbjct: 271 IDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSA 330
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L +++ G+ + L ++M +R+I D TY + + + +D + +F M ++
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK- 389
Query: 245 EDKC--RWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTS 298
C TY+ L + KA+ + E ++ EM R + Y+ LI
Sbjct: 390 --DCFPNVVTYNTLIKGFCKAK---RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 299 NLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
+ D +++ ++ PP +Y +LL L K ++ FE + D+ +
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 358 VIIRAYLQKDMYEEAALIF 376
++I + E+ +F
Sbjct: 505 IMIEGMCKAGKVEDGWDLF 523
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 3/239 (1%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + T +LLN YC A+AL ++M E+ + +TV FN L + +
Sbjct: 146 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 205
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
LV+QM QR D +TY + DID + +M + + + Y+ +
Sbjct: 206 ALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDG 264
Query: 260 YVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
K + + A K+E R D Y+ LIS CN DA + +++ P
Sbjct: 265 LCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPN 324
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++ L+ A K + ++ ++E R D+ +I + D +EA +F
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 69 MEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M V D++ Y + L K+G+ AL V E+++ KM + + ++ K
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 127 IAAAEKYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ F LS N Y +++ +C++ + E A ALF +M E L ++ +N
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 575
Query: 185 LSTMYLRLGQPEKVRPLVNQMK 206
L LR G L+ +M+
Sbjct: 576 LIRARLRDGDKAASAELIKEMR 597
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 6/307 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
GR + A+E+ M R + F + +D+ K ++ A F ++E N YTY
Sbjct: 170 GRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTY 229
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
AL+N YC L A +FE M + +++ L Y + + ++ + L+ QM +
Sbjct: 230 NALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSE 289
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
+ + + +TY MQ H + + + +F +MC+ TYS L K E
Sbjct: 290 KELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLP-NLRTYSILLDGLCKHGHLE 348
Query: 268 KAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLL 325
+A L ++E K D Y+ LI L+ ++ + + P+ +Y +++
Sbjct: 349 EALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMI 408
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ-KDMYEEAALIFNNAKKRAN 384
+ L K D + F + E D +VII+ +LQ +D LI +R +
Sbjct: 409 KGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFS 468
Query: 385 ASARFFK 391
A + FK
Sbjct: 469 ADSSTFK 475
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 7/236 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ L+N C E + A+ LF +M + NTV F L + + G + R + M
Sbjct: 158 TFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETM 217
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAE 264
++ + + TY M Y +++ +VF M + C +YS L + Y K+
Sbjct: 218 TEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVH--SYSILINGYCKSR 275
Query: 265 LFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSY 321
++A+ L ++ +E+ P + Y+ L+ C+ S+L ++ + S P +Y
Sbjct: 276 RIDEAKALLTQMSEKELIP-NTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTY 334
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+LL L K ++ + + R D+ L +++I+ E A +F+
Sbjct: 335 SILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFS 390
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF-----NGLSE 139
L K G AL+++ M+ RK+ + + + + A++ F NG+
Sbjct: 340 GLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRP 399
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ TY ++ KE +++ A LF KM++ FL ++ ++N + +L+ P
Sbjct: 400 SVR---TYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAI 456
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSH 226
L+++M R S D+ T+ + + SH
Sbjct: 457 QLIDEMVGRRFSADSSTFKMLLDLESH 483
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/276 (17%), Positives = 113/276 (40%), Gaps = 3/276 (1%)
Query: 110 SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALF 167
S+ + +L AK + N + + A N YT L+N C+ A+++
Sbjct: 85 SFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVL 144
Query: 168 EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHL 227
KM +L ++V F L G+ ++ L N+M R+ + +T+ + +
Sbjct: 145 SKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKK 204
Query: 228 NDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAY 287
+ VF M + + +T + + ++ E+ + +++ + + +Y
Sbjct: 205 GMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSY 264
Query: 288 HFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
LI+ YC + +D + + + P +Y L+Q L +++ ++ F++ S
Sbjct: 265 SILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCS 324
Query: 347 RCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++R +++ + EEA + + ++R
Sbjct: 325 SGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQER 360
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 133/274 (48%), Gaps = 12/274 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAKN 143
L K GRY A++V M+ +++ S +A L + K + A F+ + +
Sbjct: 426 LGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVD 485
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
Y ++++ Y K + + A LF++M+EL+ L + F+ ++ + L+ G+ + ++
Sbjct: 486 EVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVME 545
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
++ + ++LD+ + + Y +++ + F + Y+++ S+Y +
Sbjct: 546 ELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVE--SGIADLMAYNDMLSLYAEF 603
Query: 264 ELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTS 320
++ E A+L ++L+ ++P D+ + ++ LYCN + + A V ++ F P + +
Sbjct: 604 DMLEDAKLLFQQLKSSSIQP-DQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHIT 662
Query: 321 YLVLLQALAKLNAID----ILKQCFEEWESRCSS 350
+L+ A + N I+ +L+ +E ES ++
Sbjct: 663 QGILINAYGEANRIEEAAGLLEASAKEDESEAAA 696
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 162/429 (37%), Gaps = 54/429 (12%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA-KNRYT 146
K G+Y A++V+E + ++ ++ T + L K + A K F L E +
Sbjct: 533 KAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIADLMA 592
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +L+ Y + M E A LF+++ + V F + +Y ++ QM+
Sbjct: 593 YNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMR 652
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV--KAE 264
++ + D++T + + +Y N I+ + E E + + ++ IY+ K
Sbjct: 653 EKGFTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEA-----AAISRIYLCLKFR 707
Query: 265 LFEKAELALKKLEEMKPRDRKAYH-----------------------------------F 289
LF+KA L L ++ E D AY+
Sbjct: 708 LFDKATLLLHRVLESFTLDSAAYNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGH 767
Query: 290 LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS 349
LI+ Y + + + LK P N Y ++ AL N ++ E+
Sbjct: 768 LIAAYGKAGRYEVLTK----LKPELPRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGL 823
Query: 350 SYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA 409
D L +++ AY + + E+A + + A R + + + + LR+ +L A
Sbjct: 824 KCDSVLVSILLNAYSKAGLVEDADALIHMA--RGDGIPLDIVAYNTIIKADLRAGRLKKA 881
Query: 410 LNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSL 468
++ S RP T DT F + AE+ K LKS D YS
Sbjct: 882 ID----TYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQ 937
Query: 469 LIKTYIAAG 477
++ Y +G
Sbjct: 938 MMNCYAKSG 946
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 67 YIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
++ G + D++ Y +++ + GR + A++ + + + S + + + AK+
Sbjct: 851 HMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKS 910
Query: 125 NGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
AEK F L + + + Y ++NCY K M E A LFE M + V++
Sbjct: 911 GRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSY 970
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
NNL Y R GQ K L+ +M + ++T+++ + +Y+H CN
Sbjct: 971 NNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGK-----------CN 1019
Query: 243 ECED 246
E E+
Sbjct: 1020 EAEN 1023
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 125/306 (40%), Gaps = 8/306 (2%)
Query: 87 RKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNR 144
RK GR+ ALEV E M + + + L + K A F + E ++
Sbjct: 392 RKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSK 451
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
Y+Y +L+ K E A ++F M + + V + ++ ++Y + G ++ L +
Sbjct: 452 YSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQE 511
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC--EDKCRWTTYSNLASIYVK 262
M + + +D T+ V + +V E+ + D W T L YVK
Sbjct: 512 MNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKT---LLHCYVK 568
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSY 321
A E+A K L E D AY+ ++SLY L+ ++ LK S+ P +
Sbjct: 569 AGNVERATKTFKTLVESGIADLMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWF 628
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
+++ N + ++ + + + D ++I AY + + EEAA + + K
Sbjct: 629 GTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEASAK 688
Query: 382 RANASA 387
+ A
Sbjct: 689 EDESEA 694
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 118/302 (39%), Gaps = 67/302 (22%)
Query: 139 EYAKNRYTY----GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
E +N + Y GAL+NC E+A L EKM ++ ++V + L Y + G
Sbjct: 787 ELPRNNFVYSSMVGALINCN----QLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGL 842
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQ-------------SYSHLNDID---------- 231
E L++ + I LD + Y ++ +YS L ++
Sbjct: 843 VEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDT 902
Query: 232 ------------GVERVFYEMCN---ECEDKCRWTTYSNLASIYVKAELFEKAE--LALK 274
E++F ++ + + ++K YS + + Y K+ ++E A
Sbjct: 903 MISVFAKSGRTRDAEKMFKDLKSAGFQPDEK----VYSQMMNCYAKSGMYEHAADLFEAM 958
Query: 275 KLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNA 333
KL ++P + +Y+ LI Y ++ + K+ PP++ ++L+L+ A A
Sbjct: 959 KLRGLRPHE-VSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGK 1017
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR 393
+ + E R+ IR ++ Y E L F+ A+ + A + K
Sbjct: 1018 CNEAENALE-----------RMQTAAIRPTVRH--YNEVMLAFSRARLPSQAMESYLKME 1064
Query: 394 ES 395
S
Sbjct: 1065 RS 1066
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
Query: 100 EWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKEL 158
EW+E+ ++ F+ D+A + L AK G+ AE Y + + + + ALL Y
Sbjct: 54 EWLEANGQLEFNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVAN 113
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
E+A +F K+ +L+F + A+N + +Y ++ + K+ ++ M++ NI TY
Sbjct: 114 NVEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYK 172
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
+ + NDI G+E+V M E + +T S LA YV L KA+ LK++EE
Sbjct: 173 ILIDGKGLSNDISGMEQVVDSMKAEGIE-LDVSTLSLLAKHYVSCGLKVKAKAILKEIEE 231
Query: 279 MKPRDRKAY-HFLISLYCNTSNLDAVNRVWGI 309
+ L+ Y D V R+W I
Sbjct: 232 TNSNGPQWLCRILLPFYGKLQMEDEVRRLWEI 263
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 150/336 (44%), Gaps = 27/336 (8%)
Query: 15 YLVRQ-LCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALG-ATGGSVTGALNAYIMEGK 72
YL R+ C ETV+ +L +R+S L V + ++ EG
Sbjct: 41 YLTRKNPCGVTPETVAH-------------AELARRISRLKWCQDHMVVPIVEEWMAEGN 87
Query: 73 TVRKDMLEYCVRSLRKFGRYRHALEVIEWM--ESRKMHFSYTDFAVYLDLTAKTNGIAAA 130
+ + L LR+ R+ HAL + +W+ + R + + + + ++DL ++ + + A
Sbjct: 88 EITRYGLIIVRHKLRRRKRFHHALRISDWIAYKKRVIPYDHKEALNHIDLVSRVS-VTRA 146
Query: 131 EKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYL 190
+ F+ L K+R Y LL+ Y + M A +++ + L + N + T+Y
Sbjct: 147 REMFDNLPADWKSREAYTVLLSMYVRHSMAADAESIYTTLKRWG-LRSISPINMMLTLYQ 205
Query: 191 RLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW 250
+ KV L+ ++ SL+ ++ + + + +E + M E ++
Sbjct: 206 KHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLVEMM--ESKNFLDE 263
Query: 251 TTYSNLASIYVKAELFEKAELALKKLEEMKP-----RDRKAYHFLISLYCNTSNLDAVNR 305
TY LAS Y +A + +KA+ L +E+ R R+ Y+ +I +Y +++ V R
Sbjct: 264 HTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYGFIGDVEGVKR 323
Query: 306 VWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+W I S PT Y+ ++++ AK+ ++ + F
Sbjct: 324 IWDI-TSRMDPTAEDYICMIRSSAKVGLFELAESGF 358
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 9/264 (3%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYT---YGALLNCYCKELMTERALALFEKM 170
+ VY++ K AE+ F L E A+ + Y +L+ Y K ALF +M
Sbjct: 180 YQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQM 239
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
V FN+L + E + M+ I D +TY + +YS +
Sbjct: 240 KGAGVPMTVVTFNSLMAFQKTVADAEAC---LRHMQAAKIKPDVITYTGLINAYSKARRV 296
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHF 289
+ VF EM R Y+ L Y K + E AE K + + + R D ++Y
Sbjct: 297 EEAHVVFREMVASGLRPSR-IAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTT 355
Query: 290 LISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRC 348
L++ Y NT N+ R+ +K + P +Y L+Q ++ I+ + Q FE+ +
Sbjct: 356 LLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAG 415
Query: 349 SSYDMRLADVIIRAYLQKDMYEEA 372
+ + +++R + Q++ +E A
Sbjct: 416 IKPNSTIFTLLVRTFGQQEDFESA 439
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R Y LL+ Y K E A +LF+ M + + + ++ L Y G +K L+
Sbjct: 314 SRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLL 373
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MKQ + + +TY MQ Y+ ++DI+ + + F ++ + K T ++ L + +
Sbjct: 374 KRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDL-QKAGIKPNSTIFTLLVRTFGQ 432
Query: 263 AELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTS 298
E FE A KK L+ P D+++ L+ C TS
Sbjct: 433 QEDFESALSWFKKMLDSGCPADQRSRAALMDA-CQTS 468
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 130/343 (37%), Gaps = 73/343 (21%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAV 116
GS G L++ +GK + D+L +R LR+ ++ LEV+ W++ + +F DF +
Sbjct: 54 GSAVGVLSSRKEDGKVSKGDVLGTLIR-LRQLNKWTMVLEVLLWLKQQDWWNFGIHDFNL 112
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
IAA YG L EL F +M E+
Sbjct: 113 M---------IAA-----------------YGKLGQPGIAELS-------FTEMREVGLE 139
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
N F +L + R G + + +M + + +TY V++ + + ER+
Sbjct: 140 PNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAERFNDAERI 199
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEK---------------------------- 268
F + E K Y+ + Y KA F +
Sbjct: 200 FKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTFNSLMAFQK 259
Query: 269 ----AELALKKLE--EMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSY 321
AE L+ ++ ++KP D Y LI+ Y ++ + V+ ++ S P+ +Y
Sbjct: 260 TVADAEACLRHMQAAKIKP-DVITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAY 318
Query: 322 LVLLQALAKLNAIDILKQCFEE-WESRCSSYDMRLADVIIRAY 363
LL A AK ++ + F+ + RC D+R ++ AY
Sbjct: 319 NTLLDAYAKCKEVEGAESLFKSMGQDRCRP-DIRSYTTLLAAY 360
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 142/364 (39%), Gaps = 36/364 (9%)
Query: 44 DKLYKRLSALGATGGSV--TGALNAYIMEGKTVR-----KDMLEYCV-----------RS 85
DK K + G V TG +N Y +GK + + M+E +
Sbjct: 545 DKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNG 604
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
L K G+ A E+ M + + + +D +K + A F+ + + N
Sbjct: 605 LVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSN 664
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
Y LL +C+ E+A L ++M F N V + + Y + G + L +
Sbjct: 665 VIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFD 724
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+MK + + D+ Y + LND++ +F E +K ++ + ++
Sbjct: 725 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-----ETNEKGCASSSAPFNALINWV 779
Query: 264 ELFEKAELALKKLEEM---------KPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KST 313
F K EL + + KP D Y+ +I C NL+A ++ + K+
Sbjct: 780 FKFGKTELTTDMINRLMDGSFDKFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHHMQKAN 838
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
PT +Y LL K+ + F+E + D + VII A+L++ M +A
Sbjct: 839 LMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKAL 898
Query: 374 LIFN 377
++ +
Sbjct: 899 VLLD 902
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 11/230 (4%)
Query: 128 AAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
A+A+KY + E N+ L+N YCK+ A + F M E LG+ + L
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECE 245
++ G+ + ++M+ + I+ D +Y + +S L ++ +F EM +
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV-QAG 660
Query: 246 DKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLD 301
Y+ L + ++ EKA+ + L+EM P + Y +I YC + +L
Sbjct: 661 LTSNVIIYNMLLGGFCRSGEIEKAK---ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLA 717
Query: 302 AVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
+++ +K P + Y L+ +LN ++ FE E C+S
Sbjct: 718 EAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCAS 767
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 19/250 (7%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--- 139
+ L K R A ++ M S + +++ +D K AA NGL
Sbjct: 287 IDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA----NGLVHEMV 342
Query: 140 ---YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
++ + Y + KE E+A ALF+ M A+ +L + R
Sbjct: 343 SHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVR 402
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR--WTTYS 254
K L+ ++K+RNI + TY ++ D+DG + EM CR Y+
Sbjct: 403 KGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEM---GASGCRPNVVIYT 459
Query: 255 NLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILK 311
L +++ F A LK++ E + P D Y+ LI +D A + + +++
Sbjct: 460 TLIKTFLQKSRFGDAVRVLKEMREQGIAP-DTFCYNSLIIGLSKAKKMDEARSFLLEMVE 518
Query: 312 STFPPTNTSY 321
+ F P +Y
Sbjct: 519 NGFKPDAFTY 528
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ CKE E A LF M + + + + +L Y ++G+ ++ +
Sbjct: 807 NDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVF 866
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--NECEDKCRW--TTYSNLAS 258
+++ I DN+ Y V + ++ + +M N +D C+ +T L S
Sbjct: 867 DEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLS 926
Query: 259 IYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSN 299
+ K E AE ++ + +K D LI+ C +SN
Sbjct: 927 GFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSN 968
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 167/418 (39%), Gaps = 35/418 (8%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMH--FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
+ L KF R ALEV E M + + D Y L + E+ GL E
Sbjct: 347 INHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGL-GLVER 405
Query: 141 AK-------NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ N TY L++ YCK M E A LF++M++ N V N L + G
Sbjct: 406 MRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHG 465
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR--WT 251
+ N+M+ + + + +TY ++++ ++N+I+ +F EM E C
Sbjct: 466 RINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM---LEAGCSPDAI 522
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGI 309
Y L S +A ++A L K++E D +++ LI+ +C + LD A + +
Sbjct: 523 VYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM 582
Query: 310 LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMY 369
+ P +Y L+ +K + ++ + +I AY
Sbjct: 583 ENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNL 642
Query: 370 EEAALIFNNAKKRANASARFFKSRESFMIYYL------RSRQLDLALNEMEAALSEAKQF 423
+EA IF + + K + +IY + R Q+DLAL+ M+ + K
Sbjct: 643 DEAMKIFRDMSSTS-------KVPPNTVIYNILINSLCRKNQVDLALSLMD----DMKVK 691
Query: 424 HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKLA 480
+P T + F+ +E+ + A E + C D+ +L + A G+ A
Sbjct: 692 GVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETA 749
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 169/419 (40%), Gaps = 36/419 (8%)
Query: 90 GRYRHALEVIEWMESRKMHF---SYTDFAVYLDLTAKTN-GIAAAEKYFNGL-SEYAK-- 142
GR AL +++ M K F S T V+ L+ + G A E+ GL S++A+
Sbjct: 206 GRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHE 265
Query: 143 ---NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
N L++ C+ T+RA + + +L + + N L T R + +++
Sbjct: 266 VFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMN 325
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED-----KCRWTTYS 254
L+ +MK+ +I + +T+ + + +D VF +M N E + TY+
Sbjct: 326 TLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYN 384
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPRDR-----KAYHFLISLYCNTSNLDAVNRVWGI 309
L K + E L +E M+ + R Y+ LI YC S ++A ++
Sbjct: 385 TLIDGLCKV---GRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441
Query: 310 L-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDM 368
+ K PP + L+ + K I+ + F E + + + +IRA+ +
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501
Query: 369 YEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA--LNEMEAALSEAKQFHWR 426
E+A +F+ + ++YY L A L+ LS+ K+ +
Sbjct: 502 IEKAMELFDEMLEAG--------CSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS 553
Query: 427 PMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKLASDMR 484
P V+ + F + +D A E K +++ D Y+ LI + G ++ R
Sbjct: 554 PDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHR 612
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 122/274 (44%), Gaps = 11/274 (4%)
Query: 70 EGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
+ K ++ D++ Y V+ L + G HAL+V+ M H + + ++ K I
Sbjct: 377 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436
Query: 128 AAAEKYFNG--LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
+ A N + Y + +T+ L++ YCK L + AL L E+M + + +N++
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-- 243
+ G+ ++V +M + + +TY + ++++ +N ++ V MC +
Sbjct: 497 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDA 302
D +++ L + + + A L +KL+E ++ LI Y + N+
Sbjct: 557 VPDA---VSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQM 613
Query: 303 VNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAID 335
+++G ++ + P +Y +L+ L K +D
Sbjct: 614 AEKIFGEMISKGYKPDLYTYRILVDGLCKAANVD 647
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 128/326 (39%), Gaps = 17/326 (5%)
Query: 61 TGALNAYIME-GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
+GAL A +++ G + K +R L + GR A+ ++E M + + D Y
Sbjct: 230 SGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGA----YVAPDVVTYNT 285
Query: 120 LT---AKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
L K + + A +Y + + +TY +++ YCK M + A L +
Sbjct: 286 LMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKG 345
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
F+ + V + +L G E+ L N+ + +++ D + Y ++ I
Sbjct: 346 FVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 405
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLY 294
+V EM E WT + + + + A + + + D ++ LI Y
Sbjct: 406 QVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGY 465
Query: 295 CNTSNLDA----VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
C LD+ V R+W P +Y +L L K + + FEE +
Sbjct: 466 CKRLKLDSALQLVERMW---TYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 522
Query: 351 YDMRLADVIIRAYLQKDMYEEAALIF 376
+ +++I + + + EEA+ +
Sbjct: 523 PNAITYNILIENFCKINQLEEASGVI 548
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 128/313 (40%), Gaps = 14/313 (4%)
Query: 74 VRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKY 133
+ D ++ V+SL K G ALEV E M+S S + V ++ A
Sbjct: 8 IGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDL 67
Query: 134 FNGLSEYAK---NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYL 190
F + + +R+TY L++ C TE A L +M + N ++++ +
Sbjct: 68 FQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLV 127
Query: 191 RLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW 250
+ +PE+ ++ +M + D + MQ ++ N+++ V+ M E K
Sbjct: 128 KEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV-ESGYKPDN 186
Query: 251 TTYSNLASIYVKAELFEKAELALKKLEEMKPR------DRKAYHFLISLYCNTSNLDAVN 304
+Y L K K + +LK L EM R + + LI C T L+
Sbjct: 187 VSYHILIHGLAK---IGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 243
Query: 305 RVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
V+G +L++ P +Y L+ L + + ++ FE+ C D + +I Y
Sbjct: 244 EVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGY 303
Query: 364 LQKDMYEEAALIF 376
++ +EA ++
Sbjct: 304 CKRGSMDEAEKLY 316
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 12/274 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHF--SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
+ L K G+ +L+++ M R + + F+ + +T + A + F + E
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
N+YTY L+ C+ +A LFEKM + + VA+N+L Y + G ++
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312
Query: 199 RPLVNQMK-QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSN 255
L +M + +T+ + + L + + EM + D C TY
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC---TYRI 369
Query: 256 LASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVW-GILKST 313
L + +A ++A K++ E K D + + C T N+D V+ KS
Sbjct: 370 LIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSG 429
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
P ++ +L ++L KL ++ ++ E ++R
Sbjct: 430 AVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 127/286 (44%), Gaps = 15/286 (5%)
Query: 69 MEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLT---AKTN 125
ME + D + + V + + R A+E + +S K F D VY L +
Sbjct: 207 MEDYGCKPDKIAFSV-VISSLSKKRRAIEAQSFFDSLKDRFE-PDVVVYTSLVHGWCRAG 264
Query: 126 GIAAAEKYFN--GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
I+ AE+ F ++ N YTY +++ C+ RA +F +M ++ N + FN
Sbjct: 265 NISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFN 324
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
NL ++++ G+ EKV + NQMK+ D +TY ++S+ ++++ ++ +
Sbjct: 325 NLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKG 384
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDA 302
C ++++ + K A K++++K R Y+ L+ ++ + + D
Sbjct: 385 C--NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDM 442
Query: 303 VNRVWGIL-KSTFPPTNTSYLVLLQALAKL----NAIDILKQCFEE 343
V ++ + ++ P +Y VL+ + NA K+ EE
Sbjct: 443 VLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEE 488
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 170/403 (42%), Gaps = 32/403 (7%)
Query: 88 KFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNGIAA--AEKYFNGLSEYAK 142
K G ALE+ + ME R M +YT LD K + A +E NG S
Sbjct: 338 KDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCS---P 394
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY AL+ + + +F+ + ++ + V +N L ++ + G +V +
Sbjct: 395 NLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVF 454
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK+ + TY+ + SYS D ++ M E +TY+ + S +
Sbjct: 455 KEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMI-EAGIYPDISTYNAVLSALAR 513
Query: 263 AELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVW-GILKSTFPPT 317
+ +AE K EM+ RD K +Y L+ Y N LD + + I P
Sbjct: 514 GGRWVQAE---KLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPH 570
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
N L+ K+N++ ++ F+E R S D+ + + ++ Y + M ++ +
Sbjct: 571 NWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLT 630
Query: 378 NAKKRA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
K+ + N SA + S + ++ SR D + EA L+E K RP + + +T
Sbjct: 631 LMKENSINHSAATYNS-----LMHMYSRLGD--CEKCEAILTEIKSSGMRPDRYSYNTVI 683
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNC----LDFSAYSLLIKTYIA 475
+ + + +E ++ + C D Y++ IK+Y+A
Sbjct: 684 YAYGRKGQM---KEASRLFSEMKCSGVKPDIVTYNIFIKSYVA 723
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 8/198 (4%)
Query: 123 KTNGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
K N ++ EK F L + + A+++ Y K M ++ + M E +
Sbjct: 583 KVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAA 642
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+N+L MY RLG EK ++ ++K + D +Y + +Y + R+F EM
Sbjct: 643 TYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 702
Query: 241 CNECED-KCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNT 297
+C K TY+ YV +FE+A ++ L + KP +R Y+ ++ YC
Sbjct: 703 --KCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNER-TYNSILEGYCRH 759
Query: 298 SNLDAVNRVWGILKSTFP 315
+ L +P
Sbjct: 760 GRMVEAKSFLSNLPKIYP 777
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ ++ T+ +LL+ Y K E A+ + +KM+ + V +N+L + Y++ G E+
Sbjct: 287 FEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEAL 346
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NEC 244
L +M+ R + D +TY + + ID + EM N C
Sbjct: 347 ELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGC 392
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/269 (17%), Positives = 110/269 (40%), Gaps = 36/269 (13%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y R TY +L++ Y + + ++A+ ++++M E + +N + + R G+ +
Sbjct: 462 YIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAE 521
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW--------- 250
L +M+ R+ D L+Y + +Y++ +D ++ + ++ + + W
Sbjct: 522 KLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVN 581
Query: 251 -------------------------TTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK 285
+ + SIY K ++ +K E L ++E
Sbjct: 582 NKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSA 641
Query: 286 A-YHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
A Y+ L+ +Y + + + +KS+ P SY ++ A + + + F E
Sbjct: 642 ATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSE 701
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ D+ ++ I++Y+ M+EEA
Sbjct: 702 MKCSGVKPDIVTYNIFIKSYVANLMFEEA 730
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 126/325 (38%), Gaps = 56/325 (17%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
V + GR+R A+ V M + + + V L + +K ++ K L + K
Sbjct: 192 VSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSK---MSVPWKEVVVLVDSMK 248
Query: 143 ------NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+RYTY L++C + + A +F++M F + V FN+L +Y + + E
Sbjct: 249 EDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHE 308
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
+ ++ +M+ C TY++L
Sbjct: 309 EAIGVLKKMENAG----------------------------------CTPSV--VTYNSL 332
Query: 257 ASIYVKAELFEKAELALKKLEE---MKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKS 312
S YVK L E+A L LK+ E MKP D Y LIS +DA + ++++
Sbjct: 333 ISAYVKDGLLEEA-LELKQEMEFRGMKP-DVVTYTTLISGLDRIGKIDAALATYSEMVRN 390
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y L++ + F++ S D+ + ++ + Q + E
Sbjct: 391 GCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEV 450
Query: 373 ALIFNNAKKRANASARFFKSRESFM 397
+ +F KK A + R++++
Sbjct: 451 SGVFKEMKK-----AGYIPERDTYV 470
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 121/300 (40%), Gaps = 13/300 (4%)
Query: 50 LSALGATG--GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM 107
L+ G G V+G G +D + S + G + A+E+ + M +
Sbjct: 438 LAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGI 497
Query: 108 HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALA 165
+ + + L A+ AEK F + + + +Y +LL+ Y ++ A
Sbjct: 498 YPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKA 557
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
L E + + + L + ++ + ++++R SLD + Y
Sbjct: 558 LSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYG 617
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRD 283
+ VE V M E TY++L +Y + EK E L +++ M+P D
Sbjct: 618 KNKMVKKVEEVLTLM-KENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRP-D 675
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQA-LAKL---NAIDILK 338
R +Y+ +I Y + +R++ +K S P +Y + +++ +A L AID+++
Sbjct: 676 RYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVR 735
>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 733
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 6/211 (2%)
Query: 130 AEKYFNG--LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A++Y+N L R+T+ LL L + A+ +E M L + V +N L
Sbjct: 211 AKRYYNAMLLEGVDPTRHTFNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLIN 270
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
Y R + ++ L +MK R+I + +++ ++ Y ID +VF EM C K
Sbjct: 271 GYFRFKKVDEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGRIDDALKVFEEM-KGCGVK 329
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNR 305
T+S L AE +A L ++ E + P+D + ++S C +LDA
Sbjct: 330 PNVVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNALFMKMMSCQCKAGDLDAAAD 389
Query: 306 VW-GILKSTFPPTNTSYLVLLQALAKLNAID 335
V +++ + P Y VL+++ K N D
Sbjct: 390 VLKAMVRLSIPTEAGHYGVLIESFCKANVYD 420
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 160/442 (36%), Gaps = 65/442 (14%)
Query: 94 HALEVIEWMESRKM--HFSYTDFAVYLDLTAKTNGIAAAEKYFN----GLSEYAKNRYTY 147
HAL+ W+E + H T + L + A FN G+S A +
Sbjct: 101 HALQFYRWVERAGLFTHTPETTLKIVQILGRYSKLNHARCILFNDTRGGVSRAAVTEDAF 160
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ------------P 195
+L++ Y + + + ++ LF+KM EL +++ L + LR G+
Sbjct: 161 VSLIDSYGRAGIVQESVKLFKKMKELGLDRTVKSYDALFKVILRRGRYMMAKRYYNAMLL 220
Query: 196 EKVRP-----------------------LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
E V P MK R I D +TY + Y +D
Sbjct: 221 EGVDPTRHTFNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDE 280
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK----AYH 288
E++F EM + +++ + YV A + ALK EEMK K +
Sbjct: 281 AEKLFVEMKGR-DIVPNVISFTTMLKGYVAAGRIDD---ALKVFEEMKGCGVKPNVVTFS 336
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTF--PPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
L+ C+ + V G + + P N ++ ++ K +D +
Sbjct: 337 TLLPGLCDAEKMAEARDVLGEMVERYIAPKDNALFMKMMSCQCKAGDLDAAADVLKAMVR 396
Query: 347 RCSSYDMRLADVIIRAYLQKDMYEEA-----ALIFNNAKKRANASARFFKSRESFMIYYL 401
+ V+I ++ + ++Y++A LI R + S + MI YL
Sbjct: 397 LSIPTEAGHYGVLIESFCKANVYDKAEKLLDKLIEKEIVLRPQNDSEMEPSAYNLMIGYL 456
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQ--VTVDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
A + +Q + +Q V + R +E + D A E K++
Sbjct: 457 CEH------GRTGKAETFFRQLLKKGVQDSVAFNNLIRGHSKEGNPDSAFEIMKIMGRRG 510
Query: 460 CL-DFSAYSLLIKTYIAAGKLA 480
D +Y LLI++Y+ G+ A
Sbjct: 511 VARDVDSYRLLIESYLRKGEPA 532
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + ++YFN
Sbjct: 72 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYFN 131
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A+ FE M + + V +N + Y R+
Sbjct: 132 KMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVK 191
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 192 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGTKPNAITY 250
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 251 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI 310
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y +L++ K D
Sbjct: 311 RLSVPTEAGHYGLLIENFCKAGQYD 335
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 166/435 (38%), Gaps = 46/435 (10%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
+R L + G+ A V + M S + +D +K I AA + F +
Sbjct: 98 IRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 157
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N Y AL++ CK + AL + +M + +T+ +N L + G E R
Sbjct: 158 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARA 217
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE--MCNECEDKCRWTTYSNLAS 258
++M + D TY + + + + D + N C TY+ +
Sbjct: 218 FFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIH--TYTAIVD 275
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNL-DAVNRVWGILKSTFPP 316
K + E+A ++K+ A Y+ L++ C L +A++ + I+ + P
Sbjct: 276 WLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 335
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y L+ L K + F+E R + D +IR LQ +A+ ++
Sbjct: 336 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 395
Query: 377 N---------------------NAKKRANASARFFKSRE-----------SFMIYYL-RS 403
+ R A+ R FKS E S +I+ L ++
Sbjct: 396 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 455
Query: 404 RQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LD 462
R++D AL EM L++ K+ P +T + + DV+ A F + C D
Sbjct: 456 RKMDCAL-EM---LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 511
Query: 463 FSAYSLLIKTYIAAG 477
Y++LI + AG
Sbjct: 512 VYTYNILISGFCKAG 526
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 7/200 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
+R L + G+ A V + M S + +D +K I AA + F +
Sbjct: 379 IRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 438
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N Y AL++ CK + AL + +M + +T+ +N L + G E R
Sbjct: 439 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 498
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLAS 258
++M + D TY + + + + D VF +M + +C TY L S
Sbjct: 499 FFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSS---RCSANVVTYGALIS 555
Query: 259 IYVKAELFEKAELALKKLEE 278
K KA L + ++E
Sbjct: 556 GLCKRRQLTKASLYFQHMKE 575
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 9/233 (3%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY ALLN CK E A+ L K+ + + V + +L + + + L +M
Sbjct: 23 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 82
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAE 264
R ++LD + Y ++ I V+ M + C T S + KA
Sbjct: 83 ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD--VVTLSTMIDGLSKAG 140
Query: 265 LFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF-PPTNTSY 321
A K +E + P + Y LI C +D + +K F P +Y
Sbjct: 141 RIGAAVRIFKSMEARGLAP-NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 199
Query: 322 LVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
VL+ L K ++ + F+E E+ C D+ +++I + + + A+
Sbjct: 200 NVLIDGLCKSGDVEAARAFFDEMLEAGCKP-DVYTYNILISGFCKAGNTDAAS 251
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 2/129 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K + ALE++ M+ + + +D K+ + AA +F+ + E
Sbjct: 449 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC 508
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ YTY L++ +CK T+ A +F+ M + N V + L + + Q K
Sbjct: 509 KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASL 568
Query: 201 LVNQMKQRN 209
MK+R
Sbjct: 569 YFQHMKERG 577
>gi|326504234|dbj|BAJ90949.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA---NASARFFKSRESFMI 398
EE + + YD+R+A+ +++AY+ + M ++A + AK R NA K+ E FM
Sbjct: 33 EELDLKRPKYDIRVANALMKAYVTEGMLDKAIALKKRAKMRGGRLNA-----KTWEIFME 87
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFH-----WRPMQVTVDTFFRFFEEEKDVDGAEEFCK 453
+YL+ L N A K+ H W P +T +FE++KDVDGAE F +
Sbjct: 88 HYLKVGDLK---NAHWCADRAIKKGHSSGRIWVPPHDVTETLMGYFEKKKDVDGAESFVE 144
Query: 454 VLKSLN-CLDFSAYSLLIKTYIAAGKLASDMRQ 485
VLK + L + L++TY AAGK MR
Sbjct: 145 VLKKVQKDLGTVVFEPLVRTYAAAGKKFPGMRH 177
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKXGQYD 343
>gi|255562320|ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538605|gb|EEF40208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 342
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 143/320 (44%), Gaps = 15/320 (4%)
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M +L+F T A N L +Y RL + +K+ ++ M++ NI TY + + + ND
Sbjct: 1 MKDLEFPVTTFACNQLLLLYKRLDK-KKIADVLLLMEKENIKPSLFTYKLLIDTKGQSND 59
Query: 230 IDGVERVFYEM-CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD-RKAY 287
+ G++++ M + E + LA Y L EKAE LK++E + R A
Sbjct: 60 LTGMDQIVETMKADGIEPDI--NIRAILAKHYASGGLKEKAEAILKEMEGGNLEEHRWAC 117
Query: 288 HFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
L+ LY D V RVW + +S+ P + +++A KL ID ++ F +
Sbjct: 118 RLLLPLYAALGKADEVERVWKVCESS--PQLEECVAVIEAWGKLKKIDKAEEVFNRMLTT 175
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK-SRESFMIYYLRSRQL 406
R +++ Y M + KK A++ R + +S + Y+ + ++
Sbjct: 176 WKKLSSRHYSALLKVYASHKMLANGKDLI---KKMADSGCRIGPLTWDSLVKLYVEAGEV 232
Query: 407 DLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSA 465
+ A + + A A+Q H +PM + + + DV AE+ F ++ ++
Sbjct: 233 EKADSVLHKA---AQQNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFHRMRQAGYVARLRQ 289
Query: 466 YSLLIKTYIAAGKLASDMRQ 485
+ L++TYI A A +R+
Sbjct: 290 FQALVQTYINAKAPAYGIRE 309
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 122 AKTNGIAAAEKYFNG-LSEYAK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNT 179
K I AE+ FN L+ + K + Y ALL Y M L +KM +
Sbjct: 157 GKLKKIDKAEEVFNRMLTTWKKLSSRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGP 216
Query: 180 VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL-TYIVWMQSYSHLNDIDGVERVFY 238
+ +++L +Y+ G+ EK ++++ Q+N +YIV M Y+ D+ E++F+
Sbjct: 217 LTWDSLVKLYVEAGEVEKADSVLHKAAQQNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFH 276
Query: 239 EMCNECEDKCRWTTYSNLASIYVKAE 264
M + R + L Y+ A+
Sbjct: 277 RM-RQAGYVARLRQFQALVQTYINAK 301
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 142/344 (41%), Gaps = 33/344 (9%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + +++V + M+ + + + + + A++YFN
Sbjct: 187 EDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFN 246
Query: 136 GL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ +TY ++ + L E A FE+M E + + V +N + Y R+
Sbjct: 247 AMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIK 306
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI ++Y ++ Y + +D R+F EM K TY
Sbjct: 307 KMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEM-KSFGIKPNAVTY 365
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L E +A+ +K++ E + P+D + LI+ C LDA V ++
Sbjct: 366 STLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMI 425
Query: 311 KSTFPPTNTSYLVLLQALAKLN----AIDILKQCFE-----------EWESR-------- 347
+ + P Y VL++ K A+ +L + E E ES
Sbjct: 426 RLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEY 485
Query: 348 -CSSYDMRLADVIIRAYLQKDMYEEAA---LIFNNAKKRANASA 387
C+S A+ + R ++K + + A LI ++K+ A SA
Sbjct: 486 LCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPESA 529
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMV 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKAGQYD 343
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 142/344 (41%), Gaps = 33/344 (9%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + +++V + M+ + + + + + A++YFN
Sbjct: 187 EDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFN 246
Query: 136 GL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ +TY ++ + L E A FE+M E + + V +N + Y R+
Sbjct: 247 AMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIK 306
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI ++Y ++ Y + +D R+F EM K TY
Sbjct: 307 KMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEM-KSFGIKPNAVTY 365
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L E +A+ +K++ E + P+D + LI+ C LDA V ++
Sbjct: 366 STLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMI 425
Query: 311 KSTFPPTNTSYLVLLQALAKLN----AIDILKQCFE-----------EWESR-------- 347
+ + P Y VL++ K A+ +L + E E ES
Sbjct: 426 RLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEY 485
Query: 348 -CSSYDMRLADVIIRAYLQKDMYEEAA---LIFNNAKKRANASA 387
C+S A+ + R ++K + + A LI ++K+ A SA
Sbjct: 486 LCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPESA 529
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
S L AE +A + LK++ + + P D + LIS +C + NLDA V +
Sbjct: 259 STLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMX 318
Query: 312 STFPPTNTS-YLVLLQALAKLNAID 335
PT Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKXGQYD 343
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSG-IKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y +L++ K D
Sbjct: 319 RLSVPTEAGHYGLLIEKFCKAGQYD 343
>gi|297847014|ref|XP_002891388.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
gi|297337230|gb|EFH67647.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 11/239 (4%)
Query: 70 EGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIA 128
+G V+ + +++ F + ALE EWM E + + D+A L L G+
Sbjct: 47 QGDQVKPSYVRGVIKNFHDFNQCSKALEASEWMCEQKFFNIFSEDYAARLHLVETVLGLE 106
Query: 129 AAEKYFNGLSEYAKNRYTYGALLNCYCK-ELMTERALALFEKMDELKFLGNTVAFNNLST 187
AEK+F + E ++ Y LL Y K E ++A A FEKM +L FL FN++ +
Sbjct: 107 EAEKFFESIPENMRDYSVYDNLLRSYTKSEKTLDKAEATFEKMRDLGFLLKPSPFNSMIS 166
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
+Y L + + V+ L +M + ++ D+ + + S D Y + N + +
Sbjct: 167 LYRHLKKKDMVKKLEREMMENDVRFDSHKELNVLTILSTCKD------SMYSVWNYIKKR 220
Query: 248 CRWTT--YSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAV 303
+ T Y + S +K + + AE ++ + + P+ D LIS +C N V
Sbjct: 221 GKMTDEEYRSRISYLLKLDDVQGAEKLYEEWKPVGPKLDMSIPSLLISRFCEEGNGSKV 279
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTIINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LIS CN+ NLDA V ++
Sbjct: 259 STLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKAGQYD 343
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 140/341 (41%), Gaps = 34/341 (9%)
Query: 69 MEGKTVR--KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K V+ +D+ + S K G + A+++ + M+ + S + +
Sbjct: 180 MPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGR 239
Query: 127 IAAAEKYFNG-LSEYAKN-RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
A++YFN L+E + R+TY +L + L E A +E M + V +N
Sbjct: 240 YMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNT 299
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ Y R E+ +MK +NI+ ++Y ++ Y ++ D R+F EM
Sbjct: 300 MINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEM-KAA 358
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDA 302
+K TYS L AE +A L ++ P+D + L+S C +LDA
Sbjct: 359 GEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDA 418
Query: 303 VNRVW-GILKSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEE---------WESRC 348
V +++ + P Y +L++ K A+ +L+ E+ E
Sbjct: 419 AMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEA 478
Query: 349 SSYDMRL-----------ADVIIRAYLQKDMYEEAALIFNN 378
S+Y++ + AD R L+K + +E A FNN
Sbjct: 479 SAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVA--FNN 517
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 127/286 (44%), Gaps = 15/286 (5%)
Query: 69 MEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLT---AKTN 125
ME + D + + V + + R A+E + +S K F D VY L +
Sbjct: 1239 MEDYGCKPDKIAFSV-VISSLSKKRRAIEAQSFFDSLKDRFE-PDVVVYTSLVHGWCRAG 1296
Query: 126 GIAAAEKYFN--GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
I+ AE+ F ++ N YTY +++ C+ RA +F +M ++ N + FN
Sbjct: 1297 NISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFN 1356
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
NL ++++ G+ EKV + NQMK+ D +TY ++S+ ++++ ++ +
Sbjct: 1357 NLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKG 1416
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDA 302
C ++++ + K A K++++K R Y+ L+ ++ + + D
Sbjct: 1417 CNLNA--SSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDM 1474
Query: 303 VNRVWGIL-KSTFPPTNTSYLVLLQALAKL----NAIDILKQCFEE 343
V ++ + ++ P +Y VL+ + NA K+ EE
Sbjct: 1475 VLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEE 1520
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 140/341 (41%), Gaps = 34/341 (9%)
Query: 69 MEGKTVR--KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K V+ +D+ + S K G + A+++ + M+ + S + +
Sbjct: 180 MPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGR 239
Query: 127 IAAAEKYFNG-LSEYAKN-RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
A++YFN L+E + R+TY +L + L E A +E M + V +N
Sbjct: 240 YMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNT 299
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ Y R E+ +MK +NI+ ++Y ++ Y ++ D R+F EM
Sbjct: 300 MINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEM-KAA 358
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDA 302
+K TYS L AE +A L ++ P+D + L+S C +LDA
Sbjct: 359 GEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDA 418
Query: 303 VNRVW-GILKSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEE---------WESRC 348
V +++ + P Y +L++ K A+ +L+ E+ E
Sbjct: 419 AMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEA 478
Query: 349 SSYDMRL-----------ADVIIRAYLQKDMYEEAALIFNN 378
S+Y++ + AD R L+K + +E A FNN
Sbjct: 479 SAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVA--FNN 517
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 131/315 (41%), Gaps = 8/315 (2%)
Query: 60 VTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
VT A N + M K + D+ Y + +L ++H ++ M + K+ + F+
Sbjct: 306 VTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 365
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+D K IA A + + + + TY AL++ +C + A+ +F+ M
Sbjct: 366 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 425
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ N ++N L Y ++ + +K L+ QM + + D +TY + H+ +
Sbjct: 426 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 485
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISL 293
+F+EM + TY L K +A + LK +E D Y+ I
Sbjct: 486 ALFHEMVASGQIP-DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 544
Query: 294 YCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
C L+A ++ L S P +Y +++ L K +D + F + + S D
Sbjct: 545 MCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRD 604
Query: 353 MRLADVIIRAYLQKD 367
+ + IIR +L+ +
Sbjct: 605 GCIYNTIIRGFLRSN 619
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 93/241 (38%), Gaps = 5/241 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ + TYG L+N CK T A+ L M + N +A+N + + Q +
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L ++M + IS D TY + + +L + V + EM N + +S +
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTVVDA 369
Query: 260 YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPP 316
K + A + + ++P D Y L+ +C S +D +V+ ++ P
Sbjct: 370 LCKEGMIAIAHDVVDMMIKRGVEP-DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 428
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY +L+ ++ +D E+ + D + +I + A +F
Sbjct: 429 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 488
Query: 377 N 377
+
Sbjct: 489 H 489
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 18/298 (6%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
ML C+R K G Y A+E+++ ++ + + + + A N + AE++FN +
Sbjct: 213 MLTGCIRV--KHG-YAKAMELLKELQDNGLCMDCVSYGTLIAICASHNRLEDAERFFNQM 269
Query: 138 --SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
++ N + YG+LLN Y ++A L E M + N V L +Y+R G
Sbjct: 270 RAEGHSPNMFHYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLF 329
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
EK R L+++++ + + Y + M + I + VF EM + K +S
Sbjct: 330 EKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAK-NVKTDGYAHSI 388
Query: 256 LASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILK--S 312
+ S + + L E+A+L K E R D + ++ YC +++V ++ + +
Sbjct: 389 MISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLA 448
Query: 313 TFPPTNTSYLVL-------LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
P NT ++++ L L D+ ++ + E CSS + L + IRAY
Sbjct: 449 ISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKGHQPEEELCSSLILSLGN--IRAY 504
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LIS CN+ NLDA V ++
Sbjct: 259 STLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKAGQYD 343
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K+ D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKVGQYD 343
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
S L AE +A + LK++ + + P D + LIS +C + NLDA V +
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMX 318
Query: 312 STFPPTNTS-YLVLLQALAKLNAID 335
PT Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKXGQYD 343
>gi|4454476|gb|AAD20923.1| hypothetical protein [Arabidopsis thaliana]
Length = 424
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 128/324 (39%), Gaps = 67/324 (20%)
Query: 37 PFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHAL 96
P P D L +R+ + + S+T L + G L + SL + R+ HAL
Sbjct: 30 PSPELINDTLKRRIQRVQDSSVSITPLLREWCQRGNQTGLSKLRSIITSLHRSNRFSHAL 89
Query: 97 EVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYC 155
+V +WM E + S DF L L AK G+ A K+F + A++
Sbjct: 90 QVSDWMIEQKAYKLSSMDFERRLFLAAKVGGVEEAAKFFETVP--AEDH----------- 136
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
+ + L +MDE K + F L T Y
Sbjct: 137 -----DMVVKLLGEMDEKKMQPQGLCFVKLLTSY-------------------------- 165
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
S + + D+ GVE+ + +DK WTT+ +Y++A EK LAL +
Sbjct: 166 -------SMASVVDVQGVEKFLSKWEVMIQDK--WTTFYFPGLVYIRAGFMEKG-LALLR 215
Query: 276 LEEMKPRD---RKAYHFLISLYCNTSNLDAVNRVWGILKS---TFPPTNTSYLVLLQALA 329
E D Y L+++YCN + + V R+W + K +F + S +V +A
Sbjct: 216 RSETFVDDGCREIIYGCLMTVYCNENLTEDVYRLWNLAKDYGISFDSSRCSDIV--KAFT 273
Query: 330 KLNAIDILKQCFEEWESRCSSYDM 353
K +D + EEW + C + D+
Sbjct: 274 KKGDLDGV---MEEW-NECPNLDL 293
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 139/326 (42%), Gaps = 11/326 (3%)
Query: 59 SVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
+V ALN + M+ K +R +++ Y +R L +GR+ A ++ M RK++ + F+
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDEL 173
+D K + AEK ++ + + + + +TY +L+N +C + A +FE M
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
N V +N L + + + ++ L +M QR + + +TY + + + D
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 234 ERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLI 291
+ VF +M ++ TYS L E A + + L+ +M+P D Y+ +I
Sbjct: 451 QIVFKQMVSDGVLP-DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP-DIYTYNIMI 508
Query: 292 SLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
C + D + + P +Y ++ + + F E +
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 351 YDMRLADVIIRAYLQK-DMYEEAALI 375
D + +IRA+L+ D A LI
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELI 594
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 144/351 (41%), Gaps = 20/351 (5%)
Query: 110 SYTDFAVYLDLTAKTNG----IAAAEKYFN-GLSEYAKNRYTYGALLNCYCKELMTERAL 164
S +F+ L AK N I+ E+ N G+S N YTY L+NC+C+ AL
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH---NLYTYSILINCFCRRSQLSLAL 136
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS- 223
A+ KM +L + + V N+L + + LV QM + D+ T+ +
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD 283
+ H + V V + C+ TY + + K + A LKK+E+ K
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPD--LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 284 RKA-YHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
Y+ +I CN N+ DA+N + P +Y L++ L +
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYL 401
+ R + ++ +I A++++ EA +++ KR+ F S S + +
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS--SLINGFC 372
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVD-GAEEF 451
+LD A + E +S+ P VT +T + F + K VD G E F
Sbjct: 373 MHDRLDEAKHMFELMISK----DCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 20/183 (10%)
Query: 45 KLYKRLSALGATGGSVTGAL------------NAYI----MEGKTVRKDMLEYCV--RSL 86
+L++ +S G G +VT NA I M V D++ Y + L
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 87 RKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAKNR 144
G+ AL V E+++ KM + + ++ K + F LS N
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY +++ +C++ + E A ALF +M E L ++ +N L +LR G L+ +
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Query: 205 MKQ 207
M+
Sbjct: 597 MRS 599
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 47/286 (16%)
Query: 88 KFGR-YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNR 144
K GR + LE+++ M SR + F + L + I A ++F+GL Y
Sbjct: 269 KMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGT 328
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY ALL+ + K + AL++ +M+E + V +N + Y+R G E+ +++
Sbjct: 329 VTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDA 388
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVK 262
M + I + +TY + +Y + DID +F +M E C TY+ + + K
Sbjct: 389 MASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQM---MELGCVPNVATYNAVLGMLGK 445
Query: 263 AELFEKAE--LALKKLEEMKPR----------------------------------DRKA 286
L E+ L KL P DR
Sbjct: 446 KSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDT 505
Query: 287 YHFLISLY--CNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAK 330
++ LIS Y C ++N DA ++K+ F P +Y LL ALA+
Sbjct: 506 FNTLISAYGRCGSNN-DAAKMHEEMIKAGFSPCINTYNALLNALAR 550
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 113/257 (43%), Gaps = 6/257 (2%)
Query: 129 AAEKYFN--GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
A K F+ L +Y + Y +L+ Y + RA+ +FE+M+E + V +N +
Sbjct: 205 VASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVML 264
Query: 187 TMYLRLGQP-EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECE 245
+Y ++G+ +K+ L+++M+ R + D T + + ID F + +E
Sbjct: 265 DVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGY 324
Query: 246 DKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTS-NLDAV 303
K TY+ L ++ KA +F +A L ++EE P D Y+ +++ Y + +
Sbjct: 325 -KPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGA 383
Query: 304 NRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
+ + P +Y ++ A ++ ID + F++ ++ + ++
Sbjct: 384 VVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGML 443
Query: 364 LQKDMYEEAALIFNNAK 380
+K + EE I + K
Sbjct: 444 GKKSLSEEMMKILGHMK 460
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y +L++ K D
Sbjct: 319 RLSVPTEAGHYGILIENFCKAGQYD 343
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 122/270 (45%), Gaps = 11/270 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN---GLSE 139
+RS + G ++ ++++ + M+S + S F + + K A++ ++ G
Sbjct: 155 IRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYG 214
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ + TY L+ +CK M + F +M+ + V +N L R G+ R
Sbjct: 215 VSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIAR 274
Query: 200 PLVNQMKQR--NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
LVN M ++ ++ + +TY ++ Y +++ V EM + K TY+ L
Sbjct: 275 NLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGL-KPNMITYNTLV 333
Query: 258 SIYVKAELFEKAELALKKLEE---MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-T 313
+A +K + L++++ P D ++ +I L+C NLD +V+ +K
Sbjct: 334 KGLCEAHKLDKMKDVLERMKSDGGFSP-DTFTFNTIIHLHCCAGNLDEALKVFESMKKFR 392
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
P + SY L+++L + D+ +Q F+E
Sbjct: 393 IPADSASYSTLIRSLCQKGDYDMAEQLFDE 422
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 103/486 (21%), Positives = 199/486 (40%), Gaps = 36/486 (7%)
Query: 10 ISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIM 69
IS + +R CS P E + P + N K K ++ L + G L++ ++
Sbjct: 20 ISIFNSHLRYFCSDPQEQPQN--SRPR---SRNASKTAKTIANLINSKPFSNGLLSSLLI 74
Query: 70 EGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA 129
T+ K + +R+LR AL +W + + + + + L++ + +
Sbjct: 75 ---TISKTTV---LRTLRLIKDPSKALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNV 128
Query: 130 AEKYFNGLSEYAK------NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
A + + +++K +R+ + +L+ Y + + + ++ LF+ M + + V FN
Sbjct: 129 ARNFLFSIEKHSKGTVKLEDRF-FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFN 187
Query: 184 NLSTMYLRLGQPEKVRPLVNQM-KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
+L ++ L+ G+ + + ++M +S D TY V ++ + + +D R F EM +
Sbjct: 188 SLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMES 247
Query: 243 -ECEDKCRWTTYSNLASIYVKAELFEKAELAL----KKLEEMKPRDRKAYHFLISLYCNT 297
C+ TY+ L +A A + KK E + P + Y LI YC
Sbjct: 248 FNCDADV--VTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNP-NVVTYTTLIRGYCMK 304
Query: 298 SNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS-SYDMRL 355
++ V + S P +Y L++ L + + +D +K E +S S D
Sbjct: 305 QEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFT 364
Query: 356 ADVIIRAYLQKDMYEEAALIFNNAKK-RANASARFFKSRESFMIY---YLRSRQLDLALN 411
+ II + +EA +F + KK R A + + + + Y + QL L
Sbjct: 365 FNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELF 424
Query: 412 EMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIK 471
E E LS +F +P+ + + F E AE + L D +Y+ +I
Sbjct: 425 EKEILLS---KFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIM 481
Query: 472 TYIAAG 477
+ G
Sbjct: 482 GHCKEG 487
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y L++ K+ D
Sbjct: 319 RLSVPTEAGHYGXLIENFCKVGQYD 343
>gi|302805546|ref|XP_002984524.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
gi|300147912|gb|EFJ14574.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
Length = 547
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 130/280 (46%), Gaps = 12/280 (4%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM--ESRKMHFSYTDFAVY 117
V + ++ EG + + L LR+ R+ HAL + +W+ + R + + + + +
Sbjct: 75 VVPIVEEWMAEGNEITRYGLIIVRHKLRRRKRFHHALRISDWIAYKKRVIPYDHKEALNH 134
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+DL ++ + + A + F+ L K+R Y LL+ Y + M A +++ + L
Sbjct: 135 IDLVSRVS-VTRAREMFDNLPADWKSREGYTVLLSMYVRHSMAADAESIYTTLKRWG-LR 192
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ N + T+Y + KV L+ ++ SL+ ++ + + + +E +
Sbjct: 193 SISPINMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLV 252
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP-----RDRKAYHFLIS 292
M E ++ TY LAS Y +A + +KA+ L +E+ R R+ Y+ +I
Sbjct: 253 EMM--ESKNFLDEHTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIV 310
Query: 293 LYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLN 332
+Y +++ V R+W I S PT Y+ ++++ AK+
Sbjct: 311 IYGFIGDVEGVKRIWDI-TSRMDPTAEDYICMIRSSAKVG 349
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGIL 310
S L AE +A + LK++ + + P D + LIS +C + NLD AV+ + ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAVDVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y +L++ K D
Sbjct: 319 RLSVPTEAGHYGLLIENFCKAGQYD 343
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 158/384 (41%), Gaps = 67/384 (17%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ YTYG L+N K + A + F+ M E N +N L + ++GQ + L
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLF 193
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT--TYSNLASIY 260
+MK+R +TY + + + + ++F++M D C TYS L +
Sbjct: 194 AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTG---DGCSPDSYTYSTLVNGL 250
Query: 261 VKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK----S 312
K+ E+A K EM R D Y+ L++ N+D RVW ++K
Sbjct: 251 GKSGRVEEAH---KVFREMVDRGVAVDLVNYNSLLATLAKAGNMD---RVWKLMKEMSRK 304
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEE 371
F P S+ ++ AL K N D ++ F ES C D+ +++I +Y + + +
Sbjct: 305 GFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP-DLISYNILIDSYAR---FGD 360
Query: 372 AALIFNNAKKRANASARFFKSRESF--MIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQ 429
AA ++ A F +++ +I++L + D ++E A L E + RP
Sbjct: 361 AAQARQMLEEMVEAG--FIPETKTYNSLIHWLAT---DGQVDEAFAVLEEMETAGCRPDV 415
Query: 430 VTVDTFF-------------RFFEEEKD-------------VDG---------AEEFCKV 454
VT + R F++ KD +DG A K
Sbjct: 416 VTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKD 475
Query: 455 LKSLNC-LDFSAYSLLIKTYIAAG 477
+K++ C +D + Y +LI+ AG
Sbjct: 476 MKAVGCPVDKAMYRILIRAAHRAG 499
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 238 YEMCNECED-KCRWTT--YSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISL 293
+++ N+ E C T ++ L I V + FE+AEL KKL + + DR AY+ LI
Sbjct: 50 FDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRY 109
Query: 294 YCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
+ + LD+ ++ +K P +Y L+ AL K + + F+ R + +
Sbjct: 110 FGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPN 169
Query: 353 MRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ ++++ A+ + + A +F K+R
Sbjct: 170 IPTYNLLMDAFRKVGQLDMALGLFAEMKRRG 200
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 41 GNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIE 100
G+ D + K + G +VT + ++ G YC + G + A +++
Sbjct: 373 GDADNMIKEMREKGMMPDAVT---HNILING---------YC-----RCGDAKRAFGLLD 415
Query: 101 WMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKEL 158
M + + + + + + K N + A+ F+ + + + + AL++ +C
Sbjct: 416 EMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANG 475
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
+RA L ++MD +K L + + +N L Y R G+ E+ R L+++MK+R I D+++Y
Sbjct: 476 NIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYN 535
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
+ YS D+ RV EM D TY+ L K + E AE LK++
Sbjct: 536 TLISGYSKRGDMKDAFRVRDEMMTTGFDPT-ILTYNALIQGLCKNQEGEHAEELLKEM 592
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 121/343 (35%), Gaps = 55/343 (16%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YT+ ++N CKE ++A M+ L N V +N + + G+ ++ R +
Sbjct: 217 YTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQT 276
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK + + D TY ++ +C E
Sbjct: 277 MKDKGLEPDCYTYNSFISG----------------LCKE-------------------GR 301
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNR------VWGILKSTFPPTN 318
L E + L K LE + Y+ LI YCN +LD GI+ S
Sbjct: 302 LEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASL----- 356
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ-KDMYEEAALIFN 377
+Y + + AL + +E + D +++I Y + D L+
Sbjct: 357 VTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDE 416
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
K + + S +IY L R + E +A S+ +Q P + +
Sbjct: 417 MVGKGIQPTLVTYTS----LIYVLGKRN---RMKEADALFSKIQQEGLLPDIIVFNALID 469
Query: 438 FFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKL 479
++D A + K + ++ L D Y+ L++ Y GK+
Sbjct: 470 GHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKV 512
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 13/297 (4%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAKNRY 145
K G+ A+E++ ME R + +++ +D K + A FN + N
Sbjct: 338 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 397
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L+ +C + L M + K N V F+ L +++ G+ + L +M
Sbjct: 398 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 457
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAE 264
R I+ D +TY + + N +D ++ M ++ C+ R T++ L + Y KA
Sbjct: 458 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR--TFNILINGYCKAN 515
Query: 265 LFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
+ + L+ +M R D Y+ LI +C L+ ++ ++ PP
Sbjct: 516 ---RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 572
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y +LL L + + FE+ E D+ + ++II ++A +F
Sbjct: 573 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 629
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 16/318 (5%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
GS+ A N + ME K + +++ Y + GR+ +++ M RK++ + F
Sbjct: 375 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 434
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
+V +D K + AE+ + A + TY +L++ +CKE ++A + + M
Sbjct: 435 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 494
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
N FN L Y + + + L +M R + D +TY +Q + L ++
Sbjct: 495 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 554
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLI 291
+ +F EM + + TY L EKA +K+E+ K D Y+ +I
Sbjct: 555 AKELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 613
Query: 292 SLYCNTSNLDAVNRVWGI-----LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
CN S +D W + LK P T Y +++ L K + + F + E
Sbjct: 614 HGMCNASKVD---DAWDLFCSLPLKGVKPGVKT-YNIMIGGLCKKGPLSEAELLFRKMEE 669
Query: 347 RCSSYDMRLADVIIRAYL 364
+ D +++IRA+L
Sbjct: 670 DGHAPDGWTYNILIRAHL 687
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 5/280 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
GR ALE+++ M ++ + A A + + EY N TY
Sbjct: 270 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 329
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
G +LN CK T A+ L KM+E + V ++ + + G + L N+M+
Sbjct: 330 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 389
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK-AELF 266
+ I+ + +TY + + + + D ++ +M + T+S L +VK +L
Sbjct: 390 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLR 448
Query: 267 EKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLL 325
E EL + + D Y LI +C ++LD N++ ++ S P ++ +L+
Sbjct: 449 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 508
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
K N ID + F + R D + +I+ + +
Sbjct: 509 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 134/345 (38%), Gaps = 14/345 (4%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ + T L+N C A+ L +KM E N V + + + + GQ
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT---TYSNL 256
L+ +M++RNI LD + Y + + +D +F NE E K T TY+ L
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF----NEMEMKGITTNIITYNIL 402
Query: 257 ASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTF 314
+ A ++ L+ + + K + + LI + L + ++
Sbjct: 403 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 462
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P +Y L+ K N +D Q + S+ ++R +++I Y + + ++
Sbjct: 463 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 522
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+F R + + + + + +L++A + +S + ++ +D
Sbjct: 523 LFRKMSLRGVVADTV--TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 580
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
E EK + E F K+ KS LD Y+++I A K+
Sbjct: 581 LCDNGESEKAL---EIFEKIEKSKMELDIGIYNIIIHGMCNASKV 622
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 138/353 (39%), Gaps = 59/353 (16%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
L A N YT ++NC+C+ A + K+ +L + NT+ F+ L G+
Sbjct: 214 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 273
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
+ LV++M + D +T + L+ + + + E + TY +
Sbjct: 274 EALELVDRMVEMGHKPDLITINTLVNGLC-LSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 332
Query: 257 ASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP 316
++ K+ + LA++ L +M+ R+ K LDAV
Sbjct: 333 LNVMCKS---GQTALAMELLRKMEERNIK--------------LDAV------------- 362
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA-LI 375
Y +++ L K ++D F E E + + ++ +++I + +++ A L+
Sbjct: 363 ---KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 419
Query: 376 FNNAKKRANASARFFKSR-ESFMIYYLRSRQLDLALNEMEAALSEAKQFHWR-------P 427
+ K++ N + F +SF+ E L EA++ H P
Sbjct: 420 RDMIKRKINPNVVTFSVLIDSFV---------------KEGKLREAEELHKEMIHRGIAP 464
Query: 428 MQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
+T + F +E +D A + ++ S C + +++LI Y A ++
Sbjct: 465 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 517
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y +L++ K D
Sbjct: 319 RLSVPTEAGHYGLLIENFCKAGQYD 343
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 141/325 (43%), Gaps = 15/325 (4%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
++GK VR +++ Y + S+ K A ++ M S+++ ++ +
Sbjct: 189 VDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGK 248
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A FN + N YT+ L++ +CKE A + M + + V +N+
Sbjct: 249 LKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNS 308
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNE 243
L Y + Q K + L N M QR ++ D +Y + + + + +D ++F EM C +
Sbjct: 309 LMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQ 368
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM----KPRDRKAYHFLISLYCNTSN 299
TY++L K+ + AL+ ++EM +P + Y+ ++ C ++
Sbjct: 369 IFP--NVVTYNSLVDGLCKS---GRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNH 423
Query: 300 LD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
+D A+ + I + P +Y VL+ L K+ +D ++ FE+ + S ++
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483
Query: 359 IIRAYLQKDMYEEAALIFNNAKKRA 383
+I + K ++E + + K
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNG 508
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 4/176 (2%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K + +++ Y V L K GR ALE+++ M R + + LD K N
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNH 423
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A + E + +TY L+N CK + A +FE + + N + +
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
L + G ++ ++++MK + +TY + + S ++ D E++ EM
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 109 FSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALAL 166
F+YT V ++ K + A+K F L Y+ N YTY +L+N +C + + LA+
Sbjct: 444 FTYT---VLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAM 500
Query: 167 FEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
KM + + N + + L + +K L+ +M R +
Sbjct: 501 LSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 19/311 (6%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRK---MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
V+ L + + AL V EW+ +RK + + + AV + + K ++AA + L +
Sbjct: 134 VKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCK 193
Query: 140 --YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP-E 196
+ + Y Y +++ + A+ +F+KM+E+ + +N + +Y ++G P
Sbjct: 194 DGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWN 253
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNECEDKCRWTTYS 254
K+ LV++MK I+ D+ TY + N + V EM DK TY+
Sbjct: 254 KMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDK---VTYN 310
Query: 255 NLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNL-DAVNRVWGI 309
L +Y K+ +++ A++ L+EM+ P Y+ LIS Y L DA+ +
Sbjct: 311 ALLDVYGKS---RRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQM 367
Query: 310 LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMY 369
++ P +Y LL K Q FEE + ++ + +I+ + + +
Sbjct: 368 VEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKF 427
Query: 370 EEAALIFNNAK 380
E +F + K
Sbjct: 428 TEMMKVFEDIK 438
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
L+ ++ ++ TY ALL+ Y K ++ A+ + ++M+ + V +N+L + Y R G E
Sbjct: 299 LAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLE 358
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSN 255
L NQM ++ I D TY + + ++F EM NE C K T++
Sbjct: 359 DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGC--KPNICTFNA 416
Query: 256 LASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
L ++ F + +K E++K D ++ L+S++ V+ V+ +K
Sbjct: 417 LIKMHGNRGKFTE---MMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMK 473
Query: 312 -STFPPTNTSYLVLLQALAKLNAID 335
+ F P ++ L+ + ++ + D
Sbjct: 474 RAGFVPERDTFNTLISSYSRCGSFD 498
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 181/443 (40%), Gaps = 39/443 (8%)
Query: 50 LSALGATGGSVTGA---LNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK 106
+S LG GG V+ A L+ +G V + + GRYR A+ V + ME
Sbjct: 172 ISILG-KGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230
Query: 107 MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE------YAKNRYTYGALLNCYCKELMT 160
+ + V L++ K + GL + A + YTY L++C + +
Sbjct: 231 CKPTLITYNVILNVYGK---MGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLY 287
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
E A + ++M F + V +N L +Y + + ++ ++ +M+ +TY
Sbjct: 288 EEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSL 347
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWT---TYSNLASIYVKAELFEKAELALKKLE 277
+ +Y+ DG+ E+ N+ +K TY+ L S + KA K + A++ E
Sbjct: 348 ISAYAR----DGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKA---GKDKAAVQIFE 400
Query: 278 EMKPRDRKA----YHFLISLYCNTSNLDAVNRVWGILKSTF--PPTNTSYLVLLQALAKL 331
EM+ K ++ LI ++ N + +V+ +K TF P ++ LL +
Sbjct: 401 EMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIK-TFQCSPDIVTWNTLLSVFGQN 459
Query: 332 NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK 391
+ F+E + + + +I +Y + +++A ++ K+ A
Sbjct: 460 GMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVY---KRMLEAGVNPDL 516
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
S + ++ L L + E L+E K +P ++T + + K++ E
Sbjct: 517 SSYNAVLAALARGGL---WKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEI---ERM 570
Query: 452 CKVLKSLNCLDFSAYSLLIKTYI 474
C + + + ++L+KT +
Sbjct: 571 CALAEEIYSGIIEPRAVLLKTLV 593
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 13/297 (4%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG--LSEYAKNRY 145
K G+ A+E++ ME RK+ +++ +D K + A FN + + +
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y L+ +C + L M + K + VAF+ L +++ G+ + L +M
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAE 264
QR IS D +TY + + N +D + M ++ C R T++ L + Y KA
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR--TFNILINGYCKAN 401
Query: 265 LFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
L + L+ +M R D Y+ LI +C L+ ++ ++ P
Sbjct: 402 LIDDG---LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY +LL L + + FE+ E D+ + ++II ++A +F
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 121/303 (39%), Gaps = 17/303 (5%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--------SEYA 141
GR ALE+++ M +M T + L A NG+ K + + + +
Sbjct: 156 GRVSEALELVDRMV--EMGHKPT----LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
N TYG +L CK T A+ L KM+E K + V ++ + + G + L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
N+M+ + D + Y ++ + + D ++ +M + +S L +V
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFV 328
Query: 262 K-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNT 319
K +L E EL + ++ D Y LI +C + LD N + ++ S P
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
++ +L+ K N ID + F + R D + +I+ + + E A +F
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 380 KKR 382
R
Sbjct: 449 VSR 451
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 49/297 (16%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G+ R A E+ + M R + + +D K N + A + + N
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ L+N YCK + + L LF KM + +TV +N L + LG+ E + L +M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA-E 264
R + D ++Y + + DG +C+ E + KA E
Sbjct: 449 VSRRVRPDIVSYKILL---------DG-------LCDNGEPE--------------KALE 478
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI-----LKSTFPPTNT 319
+FEK E + +L D Y+ +I CN S +D W + LK P T
Sbjct: 479 IFEKIEKSKMEL------DIGIYNIIIHGMCNASKVDD---AWDLFCSLPLKGVKPDVKT 529
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL-QKDMYEEAALI 375
Y +++ L K ++ F + E S + +++IRA+L + D + A LI
Sbjct: 530 -YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 6/165 (3%)
Query: 69 MEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + VR D++ Y + L G ALE+ E +E KM + + + +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 127 IAAAEKYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A F L + TY ++ CK+ A LF KM+E N +N
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY--IVWMQSYSHL 227
L +L G K L+ ++K+ S+D T +V M S L
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 13/297 (4%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG--LSEYAKNRY 145
K G+ A+E++ ME RK+ +++ +D K + A FN + + +
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y L+ +C + L M + K + VAF+ L +++ G+ + L +M
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAE 264
QR IS D +TY + + N +D + M ++ C R T++ L + Y KA
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR--TFNILINGYCKAN 401
Query: 265 LFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
L + L+ +M R D Y+ LI +C L+ ++ ++ P
Sbjct: 402 LIDDG---LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY +LL L + + FE+ E D+ + ++II ++A +F
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 49/297 (16%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G+ R A E+ + M R + + +D K N + A + + N
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ L+N YCK + + L LF KM + +TV +N L + LG+ E + L +M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA-E 264
R + D ++Y + + DG +C+ E + KA E
Sbjct: 449 VSRRVRPDIVSYKILL---------DG-------LCDNGEPE--------------KALE 478
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI-----LKSTFPPTNT 319
+FEK E + +L D Y+ +I CN S +D W + LK P T
Sbjct: 479 IFEKIEKSKMEL------DIGIYNIIIHGMCNASKVD---DAWDLFCSLPLKGVKPDVKT 529
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL-QKDMYEEAALI 375
Y +++ L K ++ F + E S + +++IRA+L + D + A LI
Sbjct: 530 -YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 121/303 (39%), Gaps = 17/303 (5%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--------SEYA 141
GR ALE+++ M +M T + L A NG+ K + + + +
Sbjct: 156 GRVSEALELVDRMV--EMGHKPT----LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
N TYG +L CK T A+ L KM+E K + V ++ + + G + L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
N+M+ + D + Y ++ + + D ++ +M + +S L +V
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFV 328
Query: 262 K-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNT 319
K +L E EL + ++ D Y LI +C + LD N + ++ S P
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
++ +L+ K N ID + F + R D + +I+ + + E A +F
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 380 KKR 382
R
Sbjct: 449 VSR 451
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 4/149 (2%)
Query: 69 MEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + VR D++ Y + L G ALE+ E +E KM + + + +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 127 IAAAEKYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A F L + TY ++ CK+ A LF KM+E N +N
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
L +L G K L+ ++K+ S+D
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
>gi|297847016|ref|XP_002891389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337231|gb|EFH67648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 56 TGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDF 114
T +V L + G V+ + V R ++ ALE EWM E R + D+
Sbjct: 63 TVSAVKTHLERWRELGDQVKPSYVRGLVEDFRSTEQFSKALEASEWMCEQRVFNVFPEDY 122
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK-ELMTERALALFEKMDEL 173
A L+L G+ AEK+F + E ++ Y LL Y K E ++A FEKM +L
Sbjct: 123 AARLNLVETVLGLEEAEKFFERIPENMRDYSVYENLLRSYTKSEKTLDKAEDTFEKMRDL 182
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
FL F+ + ++Y +L + + V+ L +M + N+ +D
Sbjct: 183 GFLSKPSPFDTMISLYRKLNKRDMVKKLKYEMMENNVKID 222
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 9/248 (3%)
Query: 89 FGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYT 146
G+ A + + M R + + F + +D K I A + F ++E + YT
Sbjct: 259 LGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYT 318
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y AL++ YC + + A LF+ M F + +N L + + + + + L+++M
Sbjct: 319 YSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMY 378
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAE 264
R+++ D +TY MQ + +++F EMC+ D TYS L K
Sbjct: 379 DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDS---ITYSILLDGLCKHG 435
Query: 265 LFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYL 322
++A LK ++E K Y+ LI CN L+A ++ + P+ +Y
Sbjct: 436 HLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYT 495
Query: 323 VLLQALAK 330
V++ L K
Sbjct: 496 VMISGLLK 503
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 7/258 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
++ L K G +AL++++ ME + + +D K A +F+ + +
Sbjct: 183 IKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGI 242
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY ++L+ +C A +LF++M + NTV F L + G + R
Sbjct: 243 PPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARR 302
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ M + + D TY M Y + +D +++F M + Y+ L + +
Sbjct: 303 VFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAP-SVRVYNILINGH 361
Query: 261 VKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPT 317
K+ +A+ L ++ ++ P D Y L+ +C +++ + S P
Sbjct: 362 CKSRRLNEAKTLLSEMYDRDLTP-DTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420
Query: 318 NTSYLVLLQALAKLNAID 335
+ +Y +LL L K +D
Sbjct: 421 SITYSILLDGLCKHGHLD 438
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 109/272 (40%), Gaps = 7/272 (2%)
Query: 110 SYTDFAVYLDLTAKTNGIAAAEKYFN--GLSEYAKNRYTYGALLNCYCKELMTERALALF 167
++ F L+ I A K F+ G +A + TY ++ CK T AL L
Sbjct: 140 THVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLL 199
Query: 168 EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHL 227
+KM+E + VA+N + + + + ++M + I + +TY + + +L
Sbjct: 200 KKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNL 259
Query: 228 NDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRK 285
++ +F +M T++ L K + +A + + E ++P D
Sbjct: 260 GQLNEATSLFKQMIGR-NVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEP-DAY 317
Query: 286 AYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
Y L+ YC S +D +++ I+ F P+ Y +L+ K ++ K E
Sbjct: 318 TYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEM 377
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
R + D +++ + Q + A +F
Sbjct: 378 YDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLF 409
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAK 142
L K G A +++ M+ K+ + + + + AA + F+ L
Sbjct: 430 GLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQP 489
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ TY +++ KE ++ A +F KM L N+ +N +LR G P L+
Sbjct: 490 SVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLI 549
Query: 203 NQMKQRNISLDNLTY 217
+M R S D+ T+
Sbjct: 550 EEMVGRGFSADSSTF 564
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 153/384 (39%), Gaps = 22/384 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ +L K GR A + M R D Y L + ++K L E +
Sbjct: 121 ISTLGKAGRLSEAFTLFAEMRERG---CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMER 177
Query: 143 NR-----YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
+ TY +L+ K+ T +A LF++M +++ F L + G+ +
Sbjct: 178 HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDD 237
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNL 256
L+++MK+R + +TY + + + D+ + EM N C K TYS L
Sbjct: 238 ALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC--KPDVVTYSCL 295
Query: 257 ASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TF 314
+ +KA ++A LKK+E E P D Y+ LI+ L+ R++ +KS
Sbjct: 296 ITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGC 355
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P +Y L+ AL K ++ FEE ES D+ II + ++A
Sbjct: 356 NPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADR 415
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+F ++ R + + +F+ R + E + K+ P T D
Sbjct: 416 LF--SEMRGKGLSPDVITYNAFLNSLGRGGR----FKEARKIFEDMKESGLLPDVATYDA 469
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSL 458
+ K+VD A C +LK L
Sbjct: 470 LLLGLSKTKEVDDA---CGLLKEL 490
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 133/343 (38%), Gaps = 11/343 (3%)
Query: 51 SALGATGGSVTGALNAYI----MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMES 104
+AL A G V + AY M+ + D++ Y + L K + A +V++ ME
Sbjct: 258 NALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEK 317
Query: 105 RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR--YTYGALLNCYCKELMTER 162
+ ++ K + A + F+ + N TY L+ K E
Sbjct: 318 EGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVES 377
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A LFE+M+ + + + ++ T+ + GQ + L ++M+ + +S D +TY ++
Sbjct: 378 ACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLN 437
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL-EEMKP 281
S ++F +M E TY L K + + A LK+L E+
Sbjct: 438 SLGRGGRFKEARKIFEDM-KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCA 496
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQC 340
D + + + + N+D + + S P +SY L+ ALAK +
Sbjct: 497 FDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNT 556
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
E+ + + D+ +I A Q + A + KR
Sbjct: 557 LEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 140/380 (36%), Gaps = 47/380 (12%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N TY +LLN K E A LFE++ K+ + V+++ L R G+ E
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASI 259
+V +M+ + + TY + D R+ EM N C R TY+ L S
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVR--TYNCLIST 123
Query: 260 YVKAELFEKA--------------------------------ELALKKLEEMK----PRD 283
KA +A + A++ LEEM+ P D
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183
Query: 284 RKAYHFLIS-LYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
Y LI+ L + + A + + P + ++ L+ AL K +D + +
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLR 402
E + R + + +I + + EA + + K+ N + + ++
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKR--NGCKPDVVTYSCLITGLIK 301
Query: 403 SRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-L 461
+ QLD A L + ++ P +T +T + ++ A +KS C
Sbjct: 302 ASQLDEACQ----VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP 357
Query: 462 DFSAYSLLIKTYIAAGKLAS 481
D YS LI A ++ S
Sbjct: 358 DVVTYSTLITALGKAARVES 377
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 69 MEGKTVRKDMLEYCVR--SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K V D++ Y ++ + G + AL + + M + + + + +D+ K N
Sbjct: 383 MREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442
Query: 127 IAAAEKYFN-GLSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
++ AE+ F + E + + AL++ +C +RA L ++MD K + + V FN
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L Y R + E+ + L+++MK+R I D+++Y + YS D+ VF EM +
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRD 283
D TY+ L Y K + AE L++++ + P D
Sbjct: 563 FDP-TLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD 602
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 129/333 (38%), Gaps = 52/333 (15%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTY 147
G+++ A + I ME + + + ++ AA K F + + + YTY
Sbjct: 231 GKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTY 290
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG-------------- 193
+ ++ CKE E A + K+ E + N V +N L G
Sbjct: 291 NSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMN 350
Query: 194 ---------------------QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ E+ ++ +M+++ + D +TY + + Y +
Sbjct: 351 RGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKK 410
Query: 233 VERVFYEMCNECEDKCRWT--TYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYH 288
+F EM E R T TY++L ++ K +AE KK E M P D ++
Sbjct: 411 ALSLFDEM---VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLP-DIIMFN 466
Query: 289 FLISLYCNTSNLDAVNRVWGILK----STFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
LI +C N+D R + +LK + P ++ L+Q + ++ K+ +E
Sbjct: 467 ALIDGHCVNGNID---RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEM 523
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ R D + +I Y ++ ++A +F+
Sbjct: 524 KERGIKPDHISYNTLISGYSKRGDMKDALEVFD 556
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 140/354 (39%), Gaps = 49/354 (13%)
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
++E+M ++ + V FN + + R G+ +K + + M+ + + +TY + Y
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRD 283
+ ++F M ++ K TY++ S K E+A L KL E + P +
Sbjct: 264 LRGKFEAASKIFKTMKDK-NLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP-N 321
Query: 284 RKAYHFLISLYCNTSNLDA--------VNRVWGILKSTFPPTNTSYLVLLQALAKLNAID 335
Y+ LI CN +LD +NR GI+ S F +Y +L+ AL I+
Sbjct: 322 AVTYNALIDGCCNKGDLDKAFAYRDEMMNR--GIVASVF-----TYNLLIHALFLEKRIE 374
Query: 336 ILKQCFEEWESRCSSYDMRLADVIIRAY----------------LQKDM------YEEAA 373
+ +E + D+ ++ I Y ++K++ Y
Sbjct: 375 EAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434
Query: 374 LIFNNAKKRANASARFFKSRESFMI-------YYLRSRQLDLALNEMEAALSEAKQFHWR 426
+F + + A +F KS + M+ + ++ ++ L E
Sbjct: 435 DVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVV 494
Query: 427 PMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
P +VT +T + + E+ V+ A++ +K D +Y+ LI Y G +
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDM 548
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 12/255 (4%)
Query: 57 GGSVTGALNAYI-MEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
G + A++A+ ME + D + + + + R R A E + +S K F D
Sbjct: 190 AGLASEAVHAFNRMEDYNCKPDKIAFSIL-ISILCRKRRATEAQSFFDSLKDKFE-PDVI 247
Query: 116 VYLDLT---AKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKM 170
VY +L + I AE+ F + N YTY +++ C+ RA +F +M
Sbjct: 248 VYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEM 307
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
++ N++ FNNL ++++ G+ EKV + NQMK+ D +TY ++S+ ++
Sbjct: 308 LDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNL 367
Query: 231 DGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYH 288
D +V M + C +T++ L K A K++E+K + + Y+
Sbjct: 368 DEALKVLNSMVKKGCSPNA--STFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYN 425
Query: 289 FLISLYCNTSNLDAV 303
L+ ++ +T + D V
Sbjct: 426 ILMRMFVDTKSTDMV 440
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 5/163 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRY 145
K GR L+V M+ + ++ K + A K N + + + N
Sbjct: 328 KAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNAS 387
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ L K A L+ KM ELK NTV +N L M++ + V L +M
Sbjct: 388 TFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEM 447
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC 248
+ ++ + TY V + Y + + + F EM E+KC
Sbjct: 448 DEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREM---VEEKC 487
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 113/281 (40%), Gaps = 19/281 (6%)
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED---KCRWTTYSNLA 257
+++ MK RN+ + T+ + ++ Y F N ED K +S L
Sbjct: 164 VIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAF----NRMEDYNCKPDKIAFSILI 219
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPP 316
SI + +A+ L++ D Y L+ +C N+ RV+ +K + P
Sbjct: 220 SILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMP 279
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
+Y +++ AL + I F E + C + + ++R +++ E+ +
Sbjct: 280 NVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNN-LLRVHVKAGRTEKVLQV 338
Query: 376 FNNAKKRANASARFFKSRESFMI-YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+N K+ +F+I + + LD AL + + + + P T +
Sbjct: 339 YNQMKRMGCPPDTV---TYNFLIESHCKDGNLDEALKVLNSMVKKG----CSPNASTFNG 391
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYI 474
F + +DV+GA +K L C + Y++L++ ++
Sbjct: 392 LFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFV 432
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 141/322 (43%), Gaps = 11/322 (3%)
Query: 50 LSALGATGGSVTGALNAYIMEGKTV--RKDMLEY--CVRSLRKFGRYRHALEVIEWMESR 105
++A +G G+ ++E + V R D++ Y + + + A+ V E M +
Sbjct: 105 INARAKSGCLAPGSAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMAS 164
Query: 106 KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERA 163
+ + + + + AE+ F L E + + TY +LL + KE +
Sbjct: 165 ECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTV 224
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
+ E++ F + + +N + MY ++G+ + L ++M+ + D +TY V + S
Sbjct: 225 ERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDS 284
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKP 281
++ I +V EM + K T+S L Y K E+A + +KP
Sbjct: 285 LGKMDRISDAGKVLEEMAD-AGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKP 343
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
DR AY ++ + + ++ + ++ ++ + P N Y V+L ALAK N D ++
Sbjct: 344 -DRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAV 402
Query: 341 FEEWESRCSSYDMRLADVIIRA 362
++ E C ++ ++I+A
Sbjct: 403 VQDMEVVCQMNPQLVSSILIKA 424
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 123/310 (39%), Gaps = 13/310 (4%)
Query: 68 IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
I +G D + +R+L GR +++ ++ S + + LD K I
Sbjct: 651 IEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDI 710
Query: 128 AAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
K +NG+ E Y N + Y ++++ C+ + +M+ F + N L
Sbjct: 711 FEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTL 770
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS-HLNDIDGVERVFYEMCNEC 244
MY G +K + + + + + + TY + YS +L +G + + NE
Sbjct: 771 LLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEG-----FTLLNEM 825
Query: 245 EDKC---RWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL 300
K + +Y +L + KA+L+E+AE +++ R +R YH L+ +Y + N
Sbjct: 826 GKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNH 885
Query: 301 DAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
++ +K PT + +L+ + D ++ +S +
Sbjct: 886 SKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTV 945
Query: 360 IRAYLQKDMY 369
AYL+ Y
Sbjct: 946 FNAYLKNGDY 955
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 120/294 (40%), Gaps = 40/294 (13%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK-----NR 144
GR+ ++++ M +++ F ++ AK+ G A F+ L E + +
Sbjct: 77 GRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKS-GCLAPGSAFDLLLEVRQVGLRPDV 135
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY L++ + + A+A+FE+M + + +N + +++ R G+ + + +
Sbjct: 136 ITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRE 195
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
+ ++ D +TY + +++ D D VERV E+ K TY+ + +Y K
Sbjct: 196 LVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKK-DGITYNTMIHMYGK-- 252
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVL 324
+ +LAL +EM+ +L C P +Y VL
Sbjct: 253 -MGRLDLALGLYDEMR-----------ALGCT-------------------PDAVTYTVL 281
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+ +L K++ I + EE + +I AY + EEA F++
Sbjct: 282 IDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSH 335
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y L++ K D
Sbjct: 319 RLSVPTEAGHYGXLIENFCKXGQYD 343
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 13/297 (4%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G+ A+E++ ME R + +++ +D K + A FN + N
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L+ +C + L M + K N V F+ L +++ G+ + L +M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAE 264
R I+ D +TY + + N +D ++ M ++ C+ R T++ L + Y KA
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR--TFNILINGYCKAN 417
Query: 265 LFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
+ + L+ +M R D Y+ LI +C L+ ++ ++ PP
Sbjct: 418 ---RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y +LL L + + FE+ E D+ + ++II ++A +F
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 16/318 (5%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
GS+ A N + ME K + +++ Y + GR+ +++ M RK++ + F
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
+V +D K + AE+ + A + TY +L++ +CKE ++A + + M
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
N FN L Y + + + L +M R + D +TY +Q + L ++
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLI 291
+ +F EM + + TY L EKA +K+E+ K D Y+ +I
Sbjct: 457 AKELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 292 SLYCNTSNLDAVNRVWGI-----LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
CN S +D W + LK P T Y +++ L K + + F + E
Sbjct: 516 HGMCNASKVD---DAWDLFCSLPLKGVKPGVKT-YNIMIGGLCKKGPLSEAELLFRKMEE 571
Query: 347 RCSSYDMRLADVIIRAYL 364
+ D +++IRA+L
Sbjct: 572 DGHAPDGWTYNILIRAHL 589
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 5/280 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
GR ALE+++ M ++ + A A + + EY N TY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
G +LN CK T A+ L KM+E + V ++ + + G + L N+M+
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK-AELF 266
+ I+ + +TY + + + + D ++ +M + T+S L +VK +L
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLR 350
Query: 267 EKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLL 325
E EL + + D Y LI +C ++LD N++ ++ S P ++ +L+
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
K N ID + F + R D + +I+ + +
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 134/345 (38%), Gaps = 14/345 (4%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ + T L+N C A+ L +KM E N V + + + + GQ
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT---TYSNL 256
L+ +M++RNI LD + Y + + +D +F EM E K T TY+ L
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM----EMKGITTNIITYNIL 304
Query: 257 ASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTF 314
+ A ++ L+ + + K + + LI + L + ++
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P +Y L+ K N +D Q + S+ ++R +++I Y + + ++
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+F R + + + + + +L++A + +S + ++ +D
Sbjct: 425 LFRKMSLRGVVADTV--TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
E EK + E F K+ KS LD Y+++I A K+
Sbjct: 483 LCDNGESEKAL---EIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 138/353 (39%), Gaps = 59/353 (16%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
L A N YT ++NC+C+ A + K+ +L + NT+ F+ L G+
Sbjct: 116 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
+ LV++M + D +T + L+ + + + E + TY +
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLC-LSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 257 ASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP 316
++ K+ + LA++ L +M+ R+ K LDAV
Sbjct: 235 LNVMCKS---GQTALAMELLRKMEERNIK--------------LDAV------------- 264
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA-LI 375
Y +++ L K ++D F E E + + ++ +++I + +++ A L+
Sbjct: 265 ---KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 376 FNNAKKRANASARFFKSR-ESFMIYYLRSRQLDLALNEMEAALSEAKQFHWR-------P 427
+ K++ N + F +SF+ E L EA++ H P
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFV---------------KEGKLREAEELHKEMIHRGIAP 366
Query: 428 MQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
+T + F +E +D A + ++ S C + +++LI Y A ++
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 173/429 (40%), Gaps = 46/429 (10%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY---- 140
L K GR A E ++ ++ +D G+ A ++ GLS Y
Sbjct: 293 GLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLID------GLFQAGRFDEGLSYYTEML 346
Query: 141 ----AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+ + Y L+ + + T+ A L ++M + F+ +T +N L +G +
Sbjct: 347 GKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNID 406
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT--TYS 254
+ + L+++M Q N+ LD+ T+ + + ID +VF EM E C T TY+
Sbjct: 407 RAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEM---GEHGCHPTVMTYN 463
Query: 255 NLASIYVKAELFEKAELALKKLE--------------EMKPRDRKAYHFLISLYCNTSN- 299
L +A + E+A + K+E + RD ++ L+ C +
Sbjct: 464 ALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQV 523
Query: 300 LDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD----MRL 355
L A + GI++S P +Y L+ L K +D + F+E + + S D L
Sbjct: 524 LKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTL 583
Query: 356 ADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEA 415
D + RA+ + D A ++F N + + + M R ++L A+N
Sbjct: 584 IDGLWRAHREND----ATMLFQNILRSGGFPS--LPIYNTMMRSLCRMKKLSQAINLWLD 637
Query: 416 ALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIA 475
L K+++ P + + FE+ + +E K+ + L+ + Y++ +
Sbjct: 638 YLP--KKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQ 695
Query: 476 AGKLASDMR 484
K+ +R
Sbjct: 696 VRKIDDALR 704
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 126/338 (37%), Gaps = 44/338 (13%)
Query: 90 GRYRHALEVIEWM---ESRKMHFSYTD-FAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRY 145
GR++ A+E M + R F Y F V +D +A + + S N
Sbjct: 158 GRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVS--SGCLPNST 215
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L++ CK M AL +F++M E + + + L + G+ E L+ M
Sbjct: 216 TYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSM 275
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ D +TY V++ +D F E+ + YS L +A
Sbjct: 276 KENGCPPDEVTYTVFLSGLCKAGRVDEAFHRF-ELLQDGGFTLGLIGYSCLIDGLFQAGR 334
Query: 266 FEK---------------------------AELALKK-----LEEMKPR----DRKAYHF 289
F++ AE K L+EMK + D Y+
Sbjct: 335 FDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNT 394
Query: 290 LISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRC 348
L+ + N+D + +L++ +T++ +++ L K ID Q F+E
Sbjct: 395 LLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHG 454
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANAS 386
+ + +I + M EEA ++F+ + N S
Sbjct: 455 CHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPS 492
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 142/344 (41%), Gaps = 12/344 (3%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+A N ++Y +L+ +CK E AL L E+M + V++ + +L Q ++
Sbjct: 261 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEAC 320
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
++++M QR + +TY + + + D+DG + +M E + TY+N+ +
Sbjct: 321 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM-TERGYRPNAITYNNIMHV 379
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
+ + E+A L+ + + P D Y +IS +C L +A + + +++ P
Sbjct: 380 FCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPD 439
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ-KDMYEEAALIF 376
L+ AL K AID ++ + D+ ++I A + K + E + +
Sbjct: 440 VACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLD 499
Query: 377 NNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
K R + S + R L + M AA P VT
Sbjct: 500 VMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAA-------GVMPDVVTYSIVI 552
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKL 479
F ++ ++D A + + +K C+ D YS LI AG +
Sbjct: 553 HSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTV 596
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 12/256 (4%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRY 145
K GR A ++E M + + V LD K A + E Y N +
Sbjct: 1030 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 1089
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +LL+ +CK+ ERA L M + + N V++N + + + + L+ QM
Sbjct: 1090 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 1149
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC-EDKC--RWTTYSNLASIYVK 262
N D +T+ + + +D + YE+ N E C TY++L K
Sbjct: 1150 LSNNCVPDIVTFNTIIDAMCKTYRVD----IAYELFNLIQESGCTPNLVTYNSLVHGLCK 1205
Query: 263 AELFEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNT 319
+ F++AE L+++ + D Y+ +I C + +D +++ +L P +
Sbjct: 1206 SRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 1265
Query: 320 SYLVLLQALAKLNAID 335
+Y +++ +L K +D
Sbjct: 1266 TYSIVISSLCKWRFMD 1281
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 17/243 (6%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR-----YTYGALLNCYCKELMTERALALFE 168
+++ + K + AE + + + KNR TY ++++ CK A LF+
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVM---VKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFD 534
Query: 169 KMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN 228
+M + + V ++ + + + + ++ +MK+ D +TY +
Sbjct: 535 RMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG 594
Query: 229 DIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DR 284
+D VF EM C TY+ L K K E A + LE M+ + D
Sbjct: 595 TVDKAFDVFQEMLG-CGCAPNLVTYNTLIDGLCK---INKVEQAAEMLEIMRKQSCTPDS 650
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
Y LI+ CN S L+ RV +K P +Y LL+AL K N +++++Q +E
Sbjct: 651 ITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKE 710
Query: 344 WES 346
E+
Sbjct: 711 MEA 713
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 134/345 (38%), Gaps = 50/345 (14%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + LLN K +A LF E ++ G+TV ++ L + ++R G+
Sbjct: 122 YQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAY 181
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER-VFYEMCN--ECEDKCRWTTYSNL 256
L ++M ++ + +H GV + + +C+ +C D
Sbjct: 182 ELFDEMNRKGLK-------------AHA----GVHKSILRGLCDAGQCSD---------- 214
Query: 257 ASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFP 315
A L +++ + P D Y+ +I+ + LD A+ + ++ + F
Sbjct: 215 ------------AVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA 262
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P SY +L K N ++ E+ +R D+ +I + D +EA +
Sbjct: 263 PNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRV 322
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTF 435
+ +R + + + + R LD A+ E+ ++E +RP +T +
Sbjct: 323 MDKMIQRGCQPNVI--TYGTLVDGFCRVGDLDGAV-ELVRKMTERG---YRPNAITYNNI 376
Query: 436 FRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
F D++ A + +++ C D YS +I + AGKL
Sbjct: 377 MHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 9/200 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-- 140
V L K R A + + M + + +++ + K N + +A K + E
Sbjct: 517 VDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKC 576
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY AL+N CK ++A +F++M N V +N L ++ + E+
Sbjct: 577 VPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAE 636
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK-C--RWTTYSNLA 257
++ M++++ + D++TY + + + ++ RV EM +DK C TY L
Sbjct: 637 MLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREM----KDKGCLPDRMTYGTLL 692
Query: 258 SIYVKAELFEKAELALKKLE 277
K E E LK++E
Sbjct: 693 RALQKTNNLELVEQLLKEME 712
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/315 (17%), Positives = 133/315 (42%), Gaps = 18/315 (5%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N TY +LL+ CK + A AL ++M N V +N + + +LG+ ++
Sbjct: 980 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYH 1039
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLN---DIDGVERVFYE---MCNECEDKCRWTTYS 254
L+ +M + +TY V + ++ D G+ V E + N TY+
Sbjct: 1040 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN-------LFTYN 1092
Query: 255 NLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKS 312
+L ++ K + E+A +L +++ + +Y+ +I+ C + + + V + +L +
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 1152
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P ++ ++ A+ K +DI + F + + ++ + ++ + +++A
Sbjct: 1153 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTV 432
+ ++ S + + + +S+++D A LS+ + +
Sbjct: 1213 EYLLREMTRKQGCSPDII-TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVI 1271
Query: 433 DTF--FRFFEEEKDV 445
+ +RF +E +V
Sbjct: 1272 SSLCKWRFMDEANNV 1286
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 16/289 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G D++ Y + +L K GR AL V+ M + + + + +D N
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A+ FN + S + Y L+N YCK M + A+ LF++M + + ++N+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L LG+ V+ L+++M S D +TY + + ++ D +F ++
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGI 575
Query: 245 EDKCRWTT-YSNLASI--YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSN 299
W Y+N A + K E + AE ALK L P + + Y LI+ C +
Sbjct: 576 -----WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSP-NVQTYTILINALCKDGS 629
Query: 300 L-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
+A+ + + + PP ++ +++ L + N D ++ EE +R
Sbjct: 630 FGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 145 YTYGALLNCYCKE---LMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
YT+ L++ CKE L + LA+ K E + V +N L Y + R L
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKP---DIVTYNALMEGYCSRENVHEAREL 322
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
N+M +R + D L Y V + Y +D +F E+CN+ +Y++L
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK-NLVPTIASYNSLIDGLC 381
Query: 262 KAELFEKAELALKKLEEM----KPRDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPP 316
+ + K L+EM +P D Y+ LI C L+A+ + ++K P
Sbjct: 382 NSGRISHVK---KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP 438
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y ++ N +++ K F D+ +V+I Y + +M +EA ++F
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498
Query: 377 NNAKKR 382
+ +
Sbjct: 499 KEMRHK 504
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 5/287 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTY 147
G AL+ + + ++ F + ++ +K I AA + S N Y
Sbjct: 139 GMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMY 198
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
AL++ CK+ AL L ++ E L + V +N+L +G+ ++V L+ +M +
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE-LF 266
N+ D+ T+ + + + I + V M E K TY+ L Y E +
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSRENVH 317
Query: 267 EKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLL 325
E EL + ++ D Y+ LI YC T +D ++ + PT SY L+
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
L I +K+ +E D+ +++I A ++ EA
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEA 424
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 16/289 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G D++ Y + +L K GR AL V+ M + + + + +D N
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A+ FN + S + Y L+N YCK M + A+ LF++M + + ++N+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L LG+ V+ L+++M S D +TY + + ++ D +F ++
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGI 575
Query: 245 EDKCRWTT-YSNLASI--YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSN 299
W Y+N A + K E + AE ALK L P + + Y LI+ C +
Sbjct: 576 -----WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSP-NVQTYTILINALCKDGS 629
Query: 300 L-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
+A+ + + + PP ++ +++ L + N D ++ EE +R
Sbjct: 630 FGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 145 YTYGALLNCYCKE---LMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
YT+ L++ CKE L + LA+ K E + V +N L Y + R L
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKP---DIVTYNALMEGYCSRENVHEAREL 322
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
N+M +R + D L Y V + Y +D +F E+CN+ +Y++L
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK-NLVPTIASYNSLIDGLC 381
Query: 262 KAELFEKAELALKKLEEM----KPRDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPP 316
+ + K L+EM +P D Y+ LI C L+A+ + ++K P
Sbjct: 382 NSGRISHVK---KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP 438
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y ++ N +++ K F D+ +V+I Y + +M +EA ++F
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498
Query: 377 NNAKKR 382
+ +
Sbjct: 499 KEMRHK 504
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 5/287 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTY 147
G AL+ + + ++ F + ++ +K I AA + S N Y
Sbjct: 139 GMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMY 198
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
AL++ CK+ AL L ++ E L + V +N+L +G+ ++V L+ +M +
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE-LF 266
N+ D+ T+ + + + I + V M E K TY+ L Y E +
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSRENVH 317
Query: 267 EKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLL 325
E EL + ++ D Y+ LI YC T +D ++ + PT SY L+
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
L I +K+ +E D+ +++I A ++ EA
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEA 424
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y L++ K D
Sbjct: 319 RLSVPTEAGHYGXLIENFCKXGQYD 343
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y L++ K D
Sbjct: 319 RLSVPTEAGHYGXLIENFCKXGQYD 343
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTXINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
S L AE +A + LK++ + + P D + LIS +C + NLDA V +
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCXSGNLDAAADVLKAMX 318
Query: 312 STFPPTNTS-YLVLLQALAKLNAID 335
PT Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKXGQYD 343
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y L++ K D
Sbjct: 319 RLSVPTEAGHYGXLIENFCKAGQYD 343
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 18/290 (6%)
Query: 48 KRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKM 107
+R ALG G + GA A V + L V + + G A ++ M +
Sbjct: 169 QREEALGVVGDDMRGAGCAP----NVVTYNTL---VAAFCRAGEVDAAERLVGVMREGGV 221
Query: 108 HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALA 165
S F ++ K + A K F+ ++ + +Y L++ YCK ALA
Sbjct: 222 RPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALA 281
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
+F +M + + + V F +L R G E+ LV QM++R + ++ T+ + +
Sbjct: 282 VFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC 341
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRD 283
+D EM EC + Y+ L + Y K ++A + ++E MKP D
Sbjct: 342 RNGFLDDALLAMKEM-RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKP-D 399
Query: 284 RKAYHFLISLYCNTSNLDA---VNRVWGILKSTFPPTNTSYLVLLQALAK 330
Y ++S YC + D+ +NR +LK P +Y L++ L +
Sbjct: 400 VVTYSTILSGYCKIGDTDSAFELNR--KMLKKGVVPDAITYSSLIRGLCE 447
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 3/246 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G AL V M + + F + + + A + E N +
Sbjct: 272 KAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEF 331
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ AL++ +C+ + AL ++M E + + V +N L Y +LG+ ++ R L+++M
Sbjct: 332 TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM 391
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + + D +TY + Y + D D + +M + T S + + + L
Sbjct: 392 EAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRL 451
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVL 324
+ EL K L+ D Y LI +C N+ A++ ++K P +Y VL
Sbjct: 452 GDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVL 511
Query: 325 LQALAK 330
+ L+K
Sbjct: 512 IDGLSK 517
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 112/294 (38%), Gaps = 24/294 (8%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K GR A E+I ME++ M ++ L K +A + + +
Sbjct: 377 KLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAI 436
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+ C+E A LFEKM +L + + L + + G +K L ++M
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVF--------------YEMCNECEDKCRWT 251
++ + D +TY V + S +R+ YE C CR
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC---CRTA 553
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSN-LDAVNRV 306
+ ++ ++ + A K + M R D Y LI +C N + A++
Sbjct: 554 EFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFH 613
Query: 307 WGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
+L+ F P +TS + L++ L + +E + CS D + +I
Sbjct: 614 KQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALI 667
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T G ++N YC+E E AL F +M EL N FN+L +L + + V +V
Sbjct: 530 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ M++ + D +T+ M ++S + D+ E ++ +M D +S LA Y +
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDP-DIHAFSILAKGYAR 648
Query: 263 AELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWGILKST--FPPTNT 319
A EKAE L ++ + R Y +IS +C+ + +V+ ++ + P T
Sbjct: 649 AGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGLSPNLT 708
Query: 320 SYLVLLQALAK 330
+Y L+ +
Sbjct: 709 TYETLIWGFGE 719
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 133/325 (40%), Gaps = 51/325 (15%)
Query: 63 ALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
ALN + ME K VR +++ Y + L + R+ A ++ M RK++ + F +D
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 120 LTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
K + AEK ++ + + + + +TY +L+N +C + A +FE M
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
N V +N L + + + ++ L +M QR + + +TY + + D D + VF
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNT 297
+M ++ TY+ L K EKA + + L+
Sbjct: 459 KQMVSDGVHP-NIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-------------------- 497
Query: 298 SNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS------SY 351
+S PT +Y ++++ + K ++ + W+ CS
Sbjct: 498 -------------RSKMEPTIYTYNIMIEGMCKAGKVE------DGWDLFCSLSLKGVKP 538
Query: 352 DMRLADVIIRAYLQKDMYEEAALIF 376
D+ + + +I + +K + EEA +F
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALF 563
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 15/245 (6%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + T +LLN YC A+AL ++M E+ + +T+ F L + +
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED---KCRWTTYSNL 256
LV++M QR + +TY V + DID + + + N+ E + YS +
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID----LAFNLLNKMEAAKIEANVVIYSTV 266
Query: 257 ASIYVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVWG-ILK 311
K + + AL EM+ + + Y LIS CN +R+ +++
Sbjct: 267 IDSLCK---YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
P ++ L+ A K + ++ ++E R D+ +I + D +E
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 372 AALIF 376
A +F
Sbjct: 384 AKHMF 388
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 125/315 (39%), Gaps = 12/315 (3%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N YTY L+NC+C+ ALAL KM +L + + V ++L Y +
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 201 LVNQMKQRNISLDNLTYIVWMQS-YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
LV+QM + D +T+ + + H + V V + C+ TY + +
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN--LVTYGVVVNG 234
Query: 260 YVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
K + A L K+E K + Y +I C + DA+N + P
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y L+ L + + R + ++ + +I A++++ EA +++
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
KR+ F S S + + +LD A + E +S+ P VT +T
Sbjct: 355 EMIKRSIDPDIFTYS--SLINGFCMHDRLDEAKHMFELMISK----DCFPNVVTYNTLIN 408
Query: 438 FFEEEKDVD-GAEEF 451
F + K +D G E F
Sbjct: 409 GFCKAKRIDEGVELF 423
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 173/396 (43%), Gaps = 33/396 (8%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE-YAKNRYT 146
K G ++ ALE+++ M+S + + + ++ A +F + E A N YT
Sbjct: 42 KAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVYT 101
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y L++ CK A L +M + N V +N L + +L + ++V L+ +M
Sbjct: 102 YSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMS 161
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
QR D +TY + + + N ID R+ + +K TY++L + AE
Sbjct: 162 QRGCRADVITYTMILDIFCKNNSIDEAYRLLNAL-----EKRNVVTYNSLFTALSTAEGD 216
Query: 267 EKAELALKKLEEM-----KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTS 320
E AL LE+M +P ++ Y ++ + C S LD +V + S T + S
Sbjct: 217 RTTE-ALSLLEKMIQEGTRP-NQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVS 274
Query: 321 YLVLLQALAKL----NAIDILKQCFEEWESRCSSY--DMRLADVIIRAYLQKDMYEEAAL 374
Y +L+ A A +++++L + S Y D + +V+I + + EA
Sbjct: 275 YKILVVAFASAGRTYDSLELLGRMLG------SGYILDTKTMNVVIHKFCKAGDLHEAHQ 328
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+F + +R + + + + + + +++Q D A+ L + Q ++P +T ++
Sbjct: 329 LFKSMCQRGSIPSNV--TYNTLIGAFCKAQQPDTAVK----LLHQMIQADFKPNVITYNS 382
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLL 469
+ F E+ + A +++ C D +Y+ L
Sbjct: 383 IIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 118/302 (39%), Gaps = 50/302 (16%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ RK R L +++ M R + + LD+ K N I A + N L + +
Sbjct: 141 IDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEK--R 198
Query: 143 NRYTYGALLNCY--CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY +L + T AL+L EKM + N V + + M + + ++
Sbjct: 199 NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQ 258
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
++ M + D+++Y + + +++ TY +L
Sbjct: 259 VLLSMYSQGCKTDDVSYKILVVAFASAG----------------------RTYDSL---- 292
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNT 319
EL + L D K + +I +C +L ++++ + + P+N
Sbjct: 293 ---------ELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNV 343
Query: 320 SYLVLLQALAKLN----AIDILKQCFE-EWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
+Y L+ A K A+ +L Q + +++ +Y+ II+++ ++ EEA
Sbjct: 344 TYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNS-----IIKSFCREQREEEARG 398
Query: 375 IF 376
IF
Sbjct: 399 IF 400
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 129/296 (43%), Gaps = 19/296 (6%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLT---AKTNGIAAAEKYFNG--LSEY 140
+ R R A E + +S K F D VY +L + I+ AEK F L+
Sbjct: 228 ISNLSRKRRASEAQSFFDSLKDRFE-PDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGI 286
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N YTY +++ C+ RA +F M + N + FNNL ++++ G+PEKV
Sbjct: 287 EPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQ 346
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
+ NQMK+ D +TY ++++ +++ +V M +CE +T++ +
Sbjct: 347 VYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCE--VNASTFNTIFRY 404
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGIL--KSTFPP 316
K A K+ E K + Y+ L+ ++ + + D V ++ + K P
Sbjct: 405 IEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPN 464
Query: 317 TNTSYLVLLQALAKL----NAIDILKQCFEE--WESRCSSYDMRLADVIIRAYLQK 366
NT Y +L+ + NA + K+ EE S Y+M LA + L+K
Sbjct: 465 VNT-YRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKK 519
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 122/290 (42%), Gaps = 21/290 (7%)
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED-KC--RWTTYSNLA 257
L++ MK RN+ + T+ + ++ Y G+ N ED C +S +
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRA----GLASEAVHCFNRMEDYGCVPDQIAFSIVI 228
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPP 316
S + +A+ L++ D Y L+ +C + +V+ +K + P
Sbjct: 229 SNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEP 288
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
+Y +++ AL + I F + +S C+ + + ++R +++ E+ +
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN-LMRVHVKAGRPEKVLQV 347
Query: 376 FNNAKKRANASARFFKSRESFMI-YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+N KK +F+I + R L+ A+ + + + + + T +T
Sbjct: 348 YNQMKKLGCEPDTI---TYNFLIETHCRDENLENAVKVLNTMIKKKCEVNAS----TFNT 400
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKLASDM 483
FR+ E+++DV+GA + C + Y++L++ + AG ++DM
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF--AGSKSTDM 448
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 173/396 (43%), Gaps = 33/396 (8%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE-YAKNRYT 146
K G ++ ALE+++ M+S + + + ++ A +F + E A N YT
Sbjct: 42 KAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVYT 101
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y L++ CK A L +M + N V +N L + +L + ++V L+ +M
Sbjct: 102 YSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMS 161
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
QR D +TY + + + N ID Y + N E + TY++L + AE
Sbjct: 162 QRGCRADVITYTMILDIFCKNNSIDEA----YRLLNALEKR-NVVTYNSLFTALSTAEGD 216
Query: 267 EKAELALKKLEEM-----KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTS 320
E AL LE+M +P ++ Y ++ + C S LD +V + S T + S
Sbjct: 217 RTTE-ALSLLEKMIQEGTRP-NQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVS 274
Query: 321 YLVLLQALAKL----NAIDILKQCFEEWESRCSSY--DMRLADVIIRAYLQKDMYEEAAL 374
Y +L+ A A +++++L + S Y D + +V+I + + EA
Sbjct: 275 YKILVVAFANAGRTYDSLELLGRMLG------SGYILDTKTMNVVIHKFCKAGDLHEAHQ 328
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+F + +R + + + + + + +++Q D A+ L + Q ++P +T ++
Sbjct: 329 LFKSMYQRGSIPSNV--TYNTLIGAFCKAQQPDTAVK----LLHQMIQADFKPNVITYNS 382
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLL 469
+ F E+ + A +++ C D +Y+ L
Sbjct: 383 IIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 50/302 (16%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ RK R L +++ M R + + LD+ K N I A + N L + +
Sbjct: 141 IDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEK--R 198
Query: 143 NRYTYGALLNCY--CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY +L + T AL+L EKM + N V + + M + + ++
Sbjct: 199 NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQ 258
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
++ M + D+++Y + + ++++ TY +L
Sbjct: 259 VLLSMYSQGCKTDDVSYKILVVAFANAG----------------------RTYDSL---- 292
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNT 319
EL + L D K + +I +C +L ++++ + + P+N
Sbjct: 293 ---------ELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNV 343
Query: 320 SYLVLLQALAKLN----AIDILKQCFE-EWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
+Y L+ A K A+ +L Q + +++ +Y+ II+++ ++ EEA
Sbjct: 344 TYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNS-----IIKSFCREQREEEARG 398
Query: 375 IF 376
IF
Sbjct: 399 IF 400
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 135/346 (39%), Gaps = 46/346 (13%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS 138
L V+ L K AL V ++ RK + T + + + + + + +N +
Sbjct: 166 LSEIVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMC 225
Query: 139 EYAK---NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
+ TY AL++ + K + A+ LF++M E + L +Y +L +
Sbjct: 226 NDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKV 285
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR------ 249
EK ++ +MK + +L TY W++ +D RVF +M +D C+
Sbjct: 286 EKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDM---IKDGCKPDVVLI 342
Query: 250 ---WTTYSNLASIYVKAELFEKAE------------LALKKLEEMKPRDRKA-------- 286
+ + V +LF K E +K L E K +A
Sbjct: 343 NSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMK 402
Query: 287 ----------YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAID 335
Y LI +C T+ ++ A+ + + + FPP +Y L+ +L K+ +
Sbjct: 403 GCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYE 462
Query: 336 ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
+ F E + C R+ V+I+ + + EA +FN +K
Sbjct: 463 AANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEK 508
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 6/257 (2%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA-AEKYFNG 136
++ + L K GR L++ MES + + + + + A+ A +F
Sbjct: 341 LINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEK 400
Query: 137 LSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ A + +TY L++ +CK E+AL L E+MDE F A+ +L ++ +
Sbjct: 401 MKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKR 460
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
E L ++K+ Y V ++ + + +F EM + K Y+
Sbjct: 461 YEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEM-EKLGSKPDVYAYN 519
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
L S V+A + ++A+ L+ ++E D +++ +++ T D ++ +KS+
Sbjct: 520 ALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSS 579
Query: 314 -FPPTNTSYLVLLQALA 329
P SY +L L+
Sbjct: 580 IIKPDAVSYNTVLGCLS 596
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 60 VTGALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
V ALN + ME K +R +++ Y + L +GR+ A +++ M +K++ + F
Sbjct: 238 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 297
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+D K AEK ++ + + + + +TY +L+N +C ++A +FE M
Sbjct: 298 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 357
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ V +N L + + + E L +M R + D +TY +Q H D D +
Sbjct: 358 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 417
Query: 235 RVFYEMCNE 243
+VF +M ++
Sbjct: 418 KVFKQMVSD 426
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 137/343 (39%), Gaps = 12/343 (3%)
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
E YTY L+NC+C+ ALAL KM +L + + V ++L Y +
Sbjct: 77 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQS-YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
LV+QM + D +T+ + + H + V V + C+ TY +
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN--LVTYGVVV 194
Query: 258 SIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFP 315
+ K + A L K+E K D ++ +I C ++ DA+N +
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P +Y L+ L Q + + + ++ + +I A++++ + EA +
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTF 435
+++ KR+ F + S + + +LD A E +S+ P VT +T
Sbjct: 315 YDDMIKRSIDPDIF--TYNSLVNGFCMHDRLDKAKQMFEFMVSK----DCFPDVVTYNTL 368
Query: 436 FRFFEEEKDV-DGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAG 477
+ F + K V DG E F ++ D Y+ LI+ G
Sbjct: 369 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 411
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
Query: 69 MEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M V D++ Y + L G+ ALEV ++M+ ++ D +Y T G
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL---DIYIY---TTMIEG 476
Query: 127 IAAAEKYFNG--------LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
+ A K +G L N TY +++ C + + + A AL +KM E L N
Sbjct: 477 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 536
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+ +N L +LR G L+ +M+
Sbjct: 537 SGTYNTLIRAHLRDGDKAASAELIREMRS 565
>gi|297836834|ref|XP_002886299.1| hypothetical protein ARALYDRAFT_319921 [Arabidopsis lyrata subsp.
lyrata]
gi|297332139|gb|EFH62558.1| hypothetical protein ARALYDRAFT_319921 [Arabidopsis lyrata subsp.
lyrata]
Length = 424
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 143/353 (40%), Gaps = 76/353 (21%)
Query: 15 YLVRQLCST-----PTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIM 69
+L+RQ ST P P P +D L +R+ + + S+T L +
Sbjct: 3 HLLRQPFSTFFWKLPCRRSFVHFPKTIPSPELIDDTLKRRIERVQDSTVSITPLLREWCQ 62
Query: 70 EGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIA 128
G L + SL + R+ HAL+V +WM E + S DF L LTAK G+
Sbjct: 63 IGNQTALSELRSIITSLHRSNRFFHALQVSDWMIEQKAYKLSSMDFERRLYLTAKVCGVE 122
Query: 129 AAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
A K+F + A++ + + L +MDE K
Sbjct: 123 EAAKFFETVP--AEDH----------------DMVVKLLGEMDEKK-------------- 150
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID--GVERVFYEMCNECED 246
M+ + +S D L + SYS +D+D G+E+ + E
Sbjct: 151 ----------------MQPQGLSFDKL-----LTSYSMASDLDVQGMEKFLSKW--EVMI 187
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK---AYHFLISLYCNTSNLDAV 303
+ +WTT+ +Y++A EK LAL + E DR Y L++ YC+ + + V
Sbjct: 188 QEKWTTFYFPGLVYLRAGFREKG-LALLRRSEPSVGDRAREIIYGCLMTAYCSENLTEDV 246
Query: 304 NRVWGILKS---TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
R+W + K +F + S +V +A K +D + EEW+ C + D+
Sbjct: 247 YRLWNLAKDYGISFDSSKCSDIV--KAFMKKGDLD---EVMEEWDE-CPNIDL 293
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 60 VTGALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
V ALN + ME K +R +++ Y + L +GR+ A +++ M +K++ + F
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+D K AEK ++ + + + + +TY +L+N +C ++A +FE M
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ V +N L + + + E L +M R + D +TY +Q H D D +
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 235 RVFYEMCNE 243
+VF +M ++
Sbjct: 456 KVFKQMVSD 464
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 137/343 (39%), Gaps = 12/343 (3%)
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
E YTY L+NC+C+ ALAL KM +L + + V ++L Y +
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQS-YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
LV+QM + D +T+ + + H + V V + C+ TY +
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN--LVTYGVVV 232
Query: 258 SIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFP 315
+ K + A L K+E K D ++ +I C ++ DA+N +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P +Y L+ L Q + + + ++ + +I A++++ + EA +
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTF 435
+++ KR+ F + S + + +LD A E +S+ P VT +T
Sbjct: 353 YDDMIKRSIDPDIF--TYNSLVNGFCMHDRLDKAKQMFEFMVSK----DCFPDVVTYNTL 406
Query: 436 FRFFEEEKDV-DGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAG 477
+ F + K V DG E F ++ D Y+ LI+ G
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
Query: 69 MEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M V D++ Y + L G+ ALEV ++M+ ++ D +Y T G
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL---DIYIY---TTMIEG 514
Query: 127 IAAAEKYFNG--------LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
+ A K +G L N TY +++ C + + + A AL +KM E L N
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+ +N L +LR G L+ +M+
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMRS 603
>gi|302801570|ref|XP_002982541.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
gi|300149640|gb|EFJ16294.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
Length = 487
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 157/402 (39%), Gaps = 58/402 (14%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
L + LR+ R+ AL++ WM R+ + D + L LT+++ AEK +
Sbjct: 106 LRVIIARLRRRSRFLQALQISNWMFHDRRFTVATQDLVMRLYLTSRSGLFEEAEKILAEV 165
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
+N + Y ALL+ Y RA L+ +M E + +NN+ MY R +
Sbjct: 166 HFTQRNEWAYLALLSGYASRRHVTRAEKLWRRMKERGLTKSPHGYNNMLIMYKRKKLHSR 225
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+R L +M + D T++V + + + G+E+
Sbjct: 226 LRQLFVEMVLSGVVPDATTFLVILSAREQIGGFQGIEK---------------------- 263
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT 317
+A A+ LE +++L T ++ V RV+G L
Sbjct: 264 ----------RARHAMANLE------------ILNLPWFT--MEVVMRVYGFLGDLEGGG 299
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+A + A+ + F++ + D++ V+I AY ++ M +A +
Sbjct: 300 KDVEESPAEAFSMAGAMGTSEAIFQKTGNETKDSDLQRHYVMIEAYCREGMTGKAQGLLR 359
Query: 378 N--AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTF 435
AK R+ A F S + +L+ +QLD AL +L+ + ++
Sbjct: 360 KLIAKGRSPAPFAF----NSIIQCFLKDKQLDRALELFYVSLNRFGTRQTLALGPSILGI 415
Query: 436 FRFFEEEKDVDGAEEFCKVLKSLNCLDFS---AYSLLIKTYI 474
+ + DV+ AE+ V K C FS Y+ L+K Y+
Sbjct: 416 MEVYAKAGDVNAAEQI--VHKCQECHYFSDVRLYNALLKVYL 455
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 6/258 (2%)
Query: 75 RKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKY 133
R+ + + V L + ++ +L +++W+ E K S + V L + A
Sbjct: 120 RQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGL 179
Query: 134 FNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLR 191
F+ + + A +RYTY L+ + KE M + AL+ +KM++ + G+ V ++NL + R
Sbjct: 180 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 239
Query: 192 LGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT 251
L K + +++K+ I+ D + Y + Y RV + NE
Sbjct: 240 LCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEA-RVLIKEMNEAGVSPNTV 298
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGI 309
+YS L S+YV+ F +A +++E+ P D + +I +Y + +R+ W +
Sbjct: 299 SYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSL 358
Query: 310 LKSTFPPTNTSYLVLLQA 327
K P SY +L+
Sbjct: 359 RKMDIEPNVVSYNTILRV 376
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+N TY ++ Y K + E+A L ++M N + ++ + +++ + G+ ++ L
Sbjct: 400 QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 459
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+++ + +D + Y + +Y + + +R+ +E+ ++ R T + LA
Sbjct: 460 FQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL-KLPDNIPRETAITILA---- 514
Query: 262 KAELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST--FPPTN 318
KA E+A ++ E + +D + +I+LY V V+ +++ FP +N
Sbjct: 515 KAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 574
Query: 319 TSYLVL 324
+VL
Sbjct: 575 AIAMVL 580
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 120/277 (43%), Gaps = 10/277 (3%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKG-FGMKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGIL 310
S L AE +A LK++ E + P D + LIS C +LD A N + ++
Sbjct: 259 STLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEE 343
+ + P Y VL++ K AI +L + E+
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEK 355
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D LIS +C + NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISSHCKSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y +L++ K D
Sbjct: 319 RLSVPTEAGHYGLLIENFCKAGQYD 343
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 170/421 (40%), Gaps = 40/421 (9%)
Query: 83 VRSLRKFGRYRHALEVIEWM----ESRKMHFSY-TDFAVYLDLTAKTNGIAAAEKYFNGL 137
+ + KF R ALEV+E M ES + S D +Y L +G+ + GL
Sbjct: 347 INHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLI---DGLCKVGRQQEGL 403
Query: 138 S---------EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
A + TY L++ +CK E+ LF++M++ N V N L
Sbjct: 404 GLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGG 463
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDK 247
R G+ + ++R + D +TY + ++ ++N+ + +F EM C
Sbjct: 464 MCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPD 523
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRV 306
Y L S + +A A L +L+++ R D Y+ LI +C T+ +RV
Sbjct: 524 A--IVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF---HRV 578
Query: 307 WGILK----STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
+ +LK + P +Y L+ +K + ++ + + +I A
Sbjct: 579 FEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINA 638
Query: 363 YLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALS---E 419
Y EA IF + K + K + +IY + L N++++A+S +
Sbjct: 639 YCLNGNGNEAMEIFKDMKAAS-------KVPPNTVIYNILINSL-CKNNKVKSAVSLMED 690
Query: 420 AKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGK 478
K + P T + F+ +EKD++ EF + C D+ +L + A G+
Sbjct: 691 MKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGE 750
Query: 479 L 479
+
Sbjct: 751 I 751
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 34/210 (16%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLG--------NTVAFNNLSTMYLRLGQ 194
N T+G L+N CK + AL + EKM K G + V +N L ++G+
Sbjct: 339 NVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGR 398
Query: 195 PEKVRPLVNQMK-QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE---------- 243
++ L+ +M+ Q+ + D +TY + + +I+ + +F EM E
Sbjct: 399 QQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVN 458
Query: 244 --CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD 301
CR S+ + +V+A+ MK D Y LI+ +CN +N +
Sbjct: 459 TLVGGMCRTGRVSSAVNFFVEAQ-----------RRGMKG-DAVTYTALINAFCNVNNFE 506
Query: 302 AVNRVWG-ILKSTFPPTNTSYLVLLQALAK 330
++ +LKS P Y L+ ++
Sbjct: 507 KAMELFNEMLKSGCSPDAIVYYTLISGFSQ 536
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 122/325 (37%), Gaps = 34/325 (10%)
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
G L+ C+ T R LF +M +L + + A N+L T R G ++ L+ +M +
Sbjct: 274 GRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVE 333
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
+I + +T+ + + +D V +M E + S + + L +
Sbjct: 334 MDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESG--GISVSVEPDVVIYNTLID 391
Query: 268 ------KAELALKKLEEMKPR-----DRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFP 315
+ + L +E M+ + D Y+ LI +C ++ ++ + K
Sbjct: 392 GLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVA 451
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P + L+ + + + F E + R D +I A+ + +E+A +
Sbjct: 452 PNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMEL 511
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA--LSEAKQFHWRPMQVTVD 433
FN K ++YY A +A+ L+E K+ RP V +
Sbjct: 512 FNEMLKSG--------CSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYN 563
Query: 434 T----------FFRFFEEEKDVDGA 448
T F R FE K+++ A
Sbjct: 564 TLIGGFCRTNKFHRVFEMLKEMEEA 588
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 108/249 (43%), Gaps = 15/249 (6%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N ++Y ++NC+C+ + + A F M + N V FN L + + G +K R L+
Sbjct: 428 NVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLL 487
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN------- 255
+ + + D T+ + + + F EM W N
Sbjct: 488 ESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEM-------IEWGINPNAVIYNIL 540
Query: 256 LASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTF 314
+ S+ ++ +L + +E D +Y+ LI ++C + ++ +++ + +S
Sbjct: 541 IRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGL 600
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P N +Y ++AL++ ++ K+ F E+ S D + ++II+ +Q++ EEA
Sbjct: 601 NPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQN 660
Query: 375 IFNNAKKRA 383
I +++
Sbjct: 661 IIERCRQKG 669
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 129/295 (43%), Gaps = 7/295 (2%)
Query: 74 VRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
+R D++ Y + + + + A+ V MES + + + + + AE
Sbjct: 332 LRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAE 391
Query: 132 KYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
F L ++ + TY +LL + KE TE+ + E+M ++ F + + +N + MY
Sbjct: 392 HLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMY 451
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR 249
+ G+ ++ L MK + D +TY V + + I+ +V EM + K
Sbjct: 452 GKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEML-DAGVKPT 510
Query: 250 WTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWG 308
TYS L Y K +AE ++ E + D AY ++ + + + ++
Sbjct: 511 LHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQ 570
Query: 309 -ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
++++ F P Y V+L AL + N D++++ ++ + S ++ V+++
Sbjct: 571 EMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGSMNPHDISSVLVKG 625
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 105/240 (43%), Gaps = 5/240 (2%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+TY A+++ Y + +A LFEK+ F + V +N+L + + G EKVR + +
Sbjct: 372 WTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEE 431
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M + D +TY + Y D R++ +M + + TY+ L + KA
Sbjct: 432 MVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNP-DAVTYTVLIDLLGKAS 490
Query: 265 LFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTS-NLDAVNRVWGILKSTFPPTNTSY 321
E+A + ++ + +KP Y LI Y ++A + +S + +Y
Sbjct: 491 KIEEASKVMSEMLDAGVKPT-LHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAY 549
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
V+L + N I ++E + D L +V++ A ++++M + + + K+
Sbjct: 550 SVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKE 609
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 12/287 (4%)
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKY--FNGLSEYAKNRYTYGALLNCYCKELM 159
+E ++ F+ TDF + +++ A E Y YA N +L+ K
Sbjct: 186 LEEHRVLFTPTDFCFVVKSVGQSSWQRALELYECLTMQQWYATNARMVATILSVLGKANQ 245
Query: 160 TERALALFEKMDELKFLGNTV-AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
A+ +F K + + + +TV +N + +Y R G EKV + N M++R D +++
Sbjct: 246 EGIAVEIFAKAESV--IADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFN 303
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECED---KCRWTTYSNLASIYVKAELFEKAELALKK 275
+ + + V + E+ +E + TY+ L S + ++A
Sbjct: 304 TLIN--AKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSH 361
Query: 276 LEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNA 333
+E + + D Y+ +IS+Y ++ LKS F P +Y LL A +K
Sbjct: 362 MESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGN 421
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
+ ++ EE D + II Y + ++EA ++ + K
Sbjct: 422 TEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMK 468
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRGRFMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A F+ M + + + +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ ++ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-YGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LIS C T NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K + D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKADQHD 343
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 129/293 (44%), Gaps = 15/293 (5%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLN 152
A+EV + M+ + + + + +++ K N ++ + F + N TY AL+N
Sbjct: 261 AVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVN 320
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
+ +E + E+A +FE+M + + A+N L Y R G P+ + + M+
Sbjct: 321 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEP 380
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN--LASIYVKAELFEKAE 270
D +Y + + ++ E F E+ + R T S+ L S + ++ + E
Sbjct: 381 DRASYNILVDAFGRAGLHQEAEAAFQELKQQ---GMRPTMKSHMLLLSAHARSGNVARCE 437
Query: 271 LALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-----STFPPTNTSYLV 323
+ +L + ++P D A + +++ Y LD + R++ ++ S P ++Y V
Sbjct: 438 EVMAQLHKSGLRP-DTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNV 496
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
L+ A + +D ++ F +R + D+ I AY +K Y + +F
Sbjct: 497 LVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVF 549
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 120/336 (35%), Gaps = 39/336 (11%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL YC RA + +M +N L+ EK + +M
Sbjct: 209 TYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRM 268
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ + TY + + Y N RVF EM K TY+ L + + + L
Sbjct: 269 KKERCRTNTZTYXLMINVYGKANQPMSSLRVFREM-KSVGCKPNICTYTALVNAFAREGL 327
Query: 266 FEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLV 323
EKAE +++++ D AY+ L+ Y + ++ +++ P SY +
Sbjct: 328 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNI 387
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
L+ A + + F+E + + M+ +++ A+ + N +
Sbjct: 388 LVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARS----------GNVARCE 437
Query: 384 NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEK 443
A+ KS R ALN M A A + D R F +
Sbjct: 438 EVMAQLHKS---------GLRPDTFALNAMLNAYGRAGRL---------DDMERLFAAME 479
Query: 444 DVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
DGA S D S Y++L+ Y AG L
Sbjct: 480 RGDGA--------SAGAPDTSTYNVLVNAYGRAGYL 507
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 143/338 (42%), Gaps = 18/338 (5%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G + AL+ + M G+ R D++ Y + L K G A+ ++ M + + +
Sbjct: 145 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 204
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSE-----YAKNRYTYGALLNCYCKELMTERALALFEK 169
+D K + A FN SE + + +TY +L++ C + L +
Sbjct: 205 NTIIDSLCKDRQVTEA---FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 261
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M + K + + V+FN + + G+ + +V++M QR + + +TY M + L++
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321
Query: 230 IDGVERVFYEM-CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKA 286
+D +VF M C C +Y+ L + Y K + +KA ++ +E+ P D
Sbjct: 322 MDEAVKVFDTMVCKGCMPN--VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP-DTVT 378
Query: 287 YHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
Y LI C+ L DA+ ++ + P +Y +LL L K + + E
Sbjct: 379 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 438
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
D+++ ++ I + E A +F+N +
Sbjct: 439 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 476
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 5/220 (2%)
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
+ A++ F +M ++ +TV FN L T ++ + L +QM I + T +
Sbjct: 43 DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102
Query: 221 MQSYSHLNDIDGVERVFYEM--CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
+ S+ HLN + V ++ D +TT + IYV+ ++ E L K + E
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTL--IRGIYVEGKIGEALHLFDKMIGE 160
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
D Y LI+ C N A R+ G +++ P +Y ++ +L K +
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
F E ++ S D+ + +I A ++ A + N
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 260
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDEL 173
+ +D + + AA F+ LS + +TY ++N C+ + + A LF +MDE
Sbjct: 451 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDEN 510
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
N +N ++ +LR + + L+ +M R S D T ++++ S DG+
Sbjct: 511 GCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD----DGL 566
Query: 234 ERVFYEMCNE 243
++ ++ E
Sbjct: 567 DQSLKQILRE 576
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 14/255 (5%)
Query: 88 KFGR-YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNR 144
K GR +R L V+E M S+ + F + L A+ + A+ +F L Y
Sbjct: 264 KMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGT 323
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY ALL + K + AL++ ++M+E ++V +N L Y R G ++ ++
Sbjct: 324 VTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEM 383
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M Q+ + + +TY + +Y D ++FY M E TY+ + S+ K
Sbjct: 384 MTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSMLGKK- 441
Query: 265 LFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDA-VNRVWGILKS-TFPPTN 318
++ +K L +MK +R ++ +++L C +D VNRV+ +KS F P
Sbjct: 442 --SRSNEMIKMLCDMKSNGCFPNRATWNTILAL-CGNKGMDKFVNRVFREMKSCGFEPDR 498
Query: 319 TSYLVLLQALAKLNA 333
++ L+ A + +
Sbjct: 499 DTFNTLISAYGRCGS 513
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 121/276 (43%), Gaps = 11/276 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWM----ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN--G 136
V+ L G + A+ + EW+ S + + + + + + + + A K +
Sbjct: 150 VKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKIP 209
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP- 195
L +Y + Y +L+ Y + E+A+ LFE+M E+ V +N + ++ ++G+
Sbjct: 210 LQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSW 269
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
K+ ++ +M+ + + D T + + + + + F E+ C + TY+
Sbjct: 270 RKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAEL-KSCGYEPGTVTYNA 328
Query: 256 LASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTS-NLDAVNRVWGILKST 313
L ++ KA ++ +A LK++EE P D Y+ L++ Y + +A + + +
Sbjct: 329 LLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKG 388
Query: 314 FPPTNTSYLVLLQALAKLNAID-ILKQCFEEWESRC 348
P +Y ++ A K D LK + E+ C
Sbjct: 389 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 424
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/236 (17%), Positives = 98/236 (41%), Gaps = 13/236 (5%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRY 145
K G Y + E + ++ S+ L K +A +E+ F + Y +
Sbjct: 580 KGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV 639
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+ ++L+ + + M ++A + + + E + V +N+L MY+R G+ K ++ +
Sbjct: 640 IFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTL 699
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ + D ++Y ++ + + R+ EM C + TY+ S Y +
Sbjct: 700 EKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIF-TYNTFVSGYTAMGM 758
Query: 266 FEKAELALKKLEEMKPRDRK-AYHFLISLYCNTSN----LDAVNRVWGILKSTFPP 316
+ + E ++ + + R + + ++ YC +D V+++ TF P
Sbjct: 759 YGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI-----KTFDP 809
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 172/404 (42%), Gaps = 24/404 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
+ S K G + A E+ E ME + + +YT LD K + AA Y L
Sbjct: 326 ISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKID--AAIGTYDEMLRN 383
Query: 140 YAK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
K N TY AL+ + +A+F+ + F+ + V +N L ++ + G +V
Sbjct: 384 GCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEV 443
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
+ +MK+ + TY+ + SYS D ++ M E +TY+ + S
Sbjct: 444 SGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMI-EAGIYPDISTYNAVLS 502
Query: 259 IYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT 317
+ +E+AE ++E + R D +Y L+ Y N LD ++ + + +
Sbjct: 503 ALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLD---KMKALSEDIYAEK 559
Query: 318 NTSYLVLLQAL----AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
S+ L++ L +K+N + ++ F E R S D+ + + ++ Y + M ++
Sbjct: 560 IESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVE 619
Query: 374 LIFNNAKKRA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTV 432
I + K + N S + S + ++ SR D + E L+E K RP + +
Sbjct: 620 EILSLMKGSSINLSTATYNS-----LMHMYSRLGD--CEKCENILTEIKSSGARPDRYSY 672
Query: 433 DTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIA 475
+T + + + A +KS + D Y++ +K+Y+A
Sbjct: 673 NTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVA 716
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
V + + R+R A+ V M + + + + V L + +K IA K L + K
Sbjct: 185 VSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSK---IAVPWKDVVALVDSMK 241
Query: 143 N------RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
N RYTY L++C + + + A +F++M F + V FN+L +Y + +
Sbjct: 242 NDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHD 301
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC---RWTTY 253
+ ++ +M+ +TY + SY DG+ + E+ E E K TY
Sbjct: 302 EAIGVLKEMELGGCPPSVVTYNSLISSYVK----DGLLKEAAELKEEMEVKGIQPDVITY 357
Query: 254 SNLASIYVKAELFEKAELALKKLEEM-----KPRDRKAYHFLISLYCNTSNLDAVNRVWG 308
+ L S +A K + A+ +EM KP + Y+ LI L+ + V+
Sbjct: 358 TTLISGLDRA---GKIDAAIGTYDEMLRNGCKP-NLCTYNALIKLHGVRGKFPEMMAVFD 413
Query: 309 ILKST-FPPTNTSYLVLLQALAKLNAID 335
L+S F P ++ LL + N +D
Sbjct: 414 DLRSAGFVPDVVTWNTLLAVFGQ-NGLD 440
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/275 (18%), Positives = 111/275 (40%), Gaps = 44/275 (16%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S Y R TY +L++ Y + + ++++ ++++M E + +N + + R G+ E+
Sbjct: 453 SGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQ 512
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSY--------------------------------- 224
L +M+ + D L+Y + +Y
Sbjct: 513 AEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVL 572
Query: 225 --SHLNDIDGVERVFYEMCNECEDKCRW--TTYSNLASIYVKAELFEKAE--LALKKLEE 278
S +N++ E+ F E+ +C + + S+Y K + +K E L+L K
Sbjct: 573 VNSKVNNLSETEKAFLELGRR---RCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSS 629
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDIL 337
+ Y+ L+ +Y + + + +KS+ P SY ++ A + +
Sbjct: 630 IN-LSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEA 688
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ F E +S D+ ++ +++Y+ M+EEA
Sbjct: 689 SRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEA 723
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 16/185 (8%)
Query: 120 LTAKTNGIAAAEKYFNGLSEYAKNRYTY-----GALLNCYCKELMTERALALFEKMDELK 174
+ +K N ++ EK F E + R + A+++ Y K M ++ + M
Sbjct: 573 VNSKVNNLSETEKAF---LELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSS 629
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+T +N+L MY RLG EK ++ ++K D +Y + +Y +
Sbjct: 630 INLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEAS 689
Query: 235 RVFYEMCNE--CEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFL 290
R+F EM + D TY+ YV +FE+A ++ + KP +R Y+ +
Sbjct: 690 RLFSEMKSSGLIPD---IVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNER-TYNSI 745
Query: 291 ISLYC 295
+ YC
Sbjct: 746 LQEYC 750
>gi|146182801|ref|XP_001025271.2| hypothetical protein TTHERM_00837970 [Tetrahymena thermophila]
gi|146143712|gb|EAS05026.2| hypothetical protein TTHERM_00837970 [Tetrahymena thermophila
SB210]
Length = 1080
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 133/284 (46%), Gaps = 13/284 (4%)
Query: 58 GSVTGALNAYIMEGK-TVRKDMLEYCVRSLRKFGRYR---HALEVIEWMESRKMHFSYTD 113
G V AL+ Y K V + YC+ ++ +G+++ +A+ + + M++ K+ +
Sbjct: 401 GQVKLALDVYGYFDKFGVSPSGVTYCIL-IKGYGQHKQFNYAMTIYQQMKTNKISLNEVT 459
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDEL 173
+D K N + AE+ + N Y LL Y K+ ++AL +FE M +
Sbjct: 460 LGCLIDTCVKCNQLNKAEEILLEEKDIKPNTIIYTTLLKGYTKQENMKKALEIFEIMKKD 519
Query: 174 KFL-GNTVAFNNLSTMYLRLGQPEKVRPLVNQM---KQRNISLDNLTYIVWMQSYSHLND 229
K L N V++N+L ++ E+++ + N++ K+ N D +TY +++ D
Sbjct: 520 KDLEPNIVSYNSLMECAVQCKDKEQMKKIFNEIMEQKEENKRADLITYSTYIKGLFKQGD 579
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAY 287
I+ +F ++ + + K Y+++ KA FEK +L +K+ + ++P + Y
Sbjct: 580 IEEALEIFEDLRKQEQYKLDEIFYNSILDGLFKARSFEKTQLLYQKMRQDNIQPSNV-TY 638
Query: 288 HFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAK 330
LI L +D A+N + + K + P Y L+QA K
Sbjct: 639 SILIKLNSAQDKVDEALNILKEMKKVSIKPGLIVYTCLIQACIK 682
>gi|414883717|tpg|DAA59731.1| TPA: hypothetical protein ZEAMMB73_675213 [Zea mays]
Length = 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 100 EWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
E M M+ + +D A+ LDL AK+ +AAA+KYF L E +K + Y ALLN Y K LM
Sbjct: 133 EVMVRSDMNPTVSDQAILLDLIAKSRCVAAAKKYFLDLPETSKTYFRYHALLNSYSKVLM 192
Query: 160 TERALALFEKMDELKF 175
E+A +L EKM+EL F
Sbjct: 193 IEKAESLVEKMEELNF 208
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+ + ++ + E A FE M + + + +N + Y R+
Sbjct: 140 KMLSEGIEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ ++ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-YGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + M P D + LIS C T NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARSILKEMVDKYMAPTDNSIFXRLISSQCKTGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKAGQHD 343
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 135/353 (38%), Gaps = 16/353 (4%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S N YT ++N CK+ E+ ++ E + V +N L + Y G E+
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
L+N M + S TY + + + VF EM T S L
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKS 312
K ++ E K +M+ RD + ++SL+ + NLD A+ + ++
Sbjct: 349 EACKKGDVVETE----KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P N Y +L+Q + I + E + + D+ + I+ ++ M EA
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTV 432
+FN +RA F + I +L N ME + K+ R VT
Sbjct: 465 DKLFNEMTERA-----LFPDSYTLTILIDGHCKLGNLQNAME-LFQKMKEKRIRLDVVTY 518
Query: 433 DTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFS-AYSLLIKTYIAAGKLASDMR 484
+T F + D+D A+E + S L +YS+L+ + G LA R
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 17/253 (6%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A + TY +L+ CK M A LF +M E ++ L + +LG +
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA-SI 259
L +MK++ I LD +TY + + + DID + ++ +M ++ E +YS L ++
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNAL 560
Query: 260 YVKAELFEKAELALKKLEEMKPRDRKAY----HFLISLYCNTSNL-DAVNRVWGILKSTF 314
K L E A + +EM ++ K + +I YC + N D + + ++ F
Sbjct: 561 CSKGHLAE----AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 315 PPTNTSYLVLLQALAK----LNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYE 370
P SY L+ + A ++K+ EE D+ + I+ + +++ +
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP--DVFTYNSILHGFCRQNQMK 674
Query: 371 EAALIFNNAKKRA 383
EA ++ +R
Sbjct: 675 EAEVVLRKMIERG 687
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 113/267 (42%), Gaps = 15/267 (5%)
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A+K FN ++E A + YT L++ +CK + A+ LF+KM E + + V +N
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + ++G + + + M + I ++Y + + + + RV+ EM ++
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK- 579
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDA 302
K +++ Y ++ E L+K+ E P D +Y+ LI + N+
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP-DCISYNTLIYGFVREENM-- 636
Query: 303 VNRVWGILK------STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
++ +G++K P +Y +L + N + + + R + D
Sbjct: 637 -SKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKKRA 383
+I ++ +D EA I + +R
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 99/240 (41%), Gaps = 13/240 (5%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G ++A+E+ + M+ +++ + LD K I A++ + + E
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y L+N C + A ++++M + N++ Y R G + +M
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDG----VERVFYEMCNECEDKCRWTTYSNLASIYV 261
D ++Y + + ++ V+++ E D TY+++ +
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD---VFTYNSILHGFC 668
Query: 262 KAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTN 318
+ ++AE+ L+K+ E + P DR Y +I+ + + NL R+ +L+ F P +
Sbjct: 669 RQNQMKEAEVVLRKMIERGVNP-DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + + +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK +NI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-YGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LIS +C NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAGQYD 343
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAK 142
+L K GRY+ + + M+ + + S + + +++ +K A+A + + S
Sbjct: 256 ALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIA 315
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y +++N Y K + E A +F++MD L L + ++ +++ + G+ + L
Sbjct: 316 DEVVYCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLF 375
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ M ++ + +T+ + + + D++ +V+ +M TY N+ ++Y K
Sbjct: 376 DVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVE--AGSANVVTYGNMINLYSK 433
Query: 263 AELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRV 306
++ E AE L ++ E +KP D Y + LYCN+ +D V
Sbjct: 434 FQMVEDAENLLAEMRESGVKP-DEYIYGSFVKLYCNSDMIDKATMV 478
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + ALEV M+ + S + + + L +K + A + F L SE +
Sbjct: 661 KSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEI 720
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y +++CY + A LF++M+ F N V +NNL + R G + R L++ M
Sbjct: 721 AYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDM 780
Query: 206 KQRNISLDNLTYIVWMQSYS 225
+++ ++TY++ M +Y
Sbjct: 781 RRKGCPPSSVTYLLLMSAYG 800
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 9/225 (4%)
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAKNRYTYGALLN--CYCKELMTERALALF 167
T + ++L + A+ FN L ++ + Y Y ++ CKEL E A+ +F
Sbjct: 545 TAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKEL--EEAIFVF 602
Query: 168 EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHL 227
++M+E + + V + L Y + G+ + L+ + K+ +++D + Y +++
Sbjct: 603 DRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKS 662
Query: 228 NDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKA 286
++ G V+ EM E + + TY+ L S++ K +A A + L + D A
Sbjct: 663 GNLKGALEVYGEM-QEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIA 721
Query: 287 YHFLISLY-CNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAK 330
Y +I Y C +A + + F P Y LL A A+
Sbjct: 722 YSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFAR 766
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T L++ Y KE + A L ++ ++ +TVA+N L+ G + + +M
Sbjct: 616 TVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEM 675
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ +I TY + + +S L D+ + F E+ N E YS + Y A
Sbjct: 676 QEADIEPSAKTYTILISLFSKLGDLGRAVQAF-EVLNSSEVGADEIAYSQMIHCYGCAGR 734
Query: 266 FEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW--GILKSTFPPTNTSY 321
++A +++E KP + Y+ L+ + + L A R+ + + PP++ +Y
Sbjct: 735 PKEAADLFQEMETKGFKP-NEVIYNNLLDAFAR-AGLFAEARLLLSDMRRKGCPPSSVTY 792
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
L+L+ A + + R D R + +IRAY +A IF
Sbjct: 793 LLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIF 847
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N Y +++ KE TE A+ F+ M L + + +N + +LG+ ++ L
Sbjct: 211 NFVLYAIIIHILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALY 270
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM----CNECEDKCRWTTYSNLAS 258
MK++ I TY + + +S EM C E Y ++ +
Sbjct: 271 LDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADE-----VVYCSIIN 325
Query: 259 IYVKAELFEKAELALKKLEEM 279
+Y KA L+E+AE K+++ +
Sbjct: 326 MYGKAGLYEEAEKIFKEMDTL 346
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 170/435 (39%), Gaps = 52/435 (11%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + + D++ Y V L K G AL ++ ME+ ++ + F +D K
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A F + N TY +L+NC C A L M E K N V FN
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF-YEMCNE 243
L + + G+ + L +M QR+I D +TY + + + N +D +++F + + +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSN 299
C + TY+ L + + K ++ E ++ EM R + Y +I + +
Sbjct: 394 CLPNIQ--TYNTLINGFCKC---KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 300 LDAVNRVWGILKSTFPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
D+ V+ + S PT+ +Y +LL L +D +
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD--------------------TAL 488
Query: 359 IIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESF--------------MIYYLRSR 404
+I YLQK E I+N + + + ++ + F MI L S+
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSK 548
Query: 405 QLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFS 464
+L L E + + K+ P T +T R + D + E K ++S + +
Sbjct: 549 RL---LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605
Query: 465 AYSLLIKTYIAAGKL 479
+ L+ + G+L
Sbjct: 606 STISLVTNMLHDGRL 620
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 75/403 (18%), Positives = 160/403 (39%), Gaps = 18/403 (4%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
++ K ++ + + E M++ + ++++++ + + ++ A + + Y
Sbjct: 92 AVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP 151
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ T +LLN YC A+AL ++M E+ + +T F L + + LV
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+QM QR D +TY + DID + +M K ++ + K
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDSLCK 270
Query: 263 AELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
+ E+A+ EM+ + + Y+ LI+ CN DA + +L+ P
Sbjct: 271 ---YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
++ L+ A K + ++ EE R D +++I + + +EA +F
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
+ ++ + + + + ++++ + E Q VT T +
Sbjct: 388 FMVSKDCLPN--IQTYNTLINGFCKCKRVEDGVE----LFREMSQRGLVGNTVTYTTIIQ 441
Query: 438 FFEEEKDVDGAE-EFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
F + D D A+ F +++ + D YS+L+ + GKL
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 18/341 (5%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTD---FAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
L K GR+ A+ + + E RKM+ D F L + A I A++ F+ +
Sbjct: 239 LTKLGRFEDAINLFK--EMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGM 296
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A T+ LL Y + M AL + + + KF + V++++L + + G PEK +
Sbjct: 297 APTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQE 356
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ + MKQR+ + +T+ M +Y+ + + ++M E + T +L +
Sbjct: 357 VFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMA-EARIEPNVVTICSLFAAC 415
Query: 261 VKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFP 315
+A EK E K R + A++ I+ Y D + ++ +
Sbjct: 416 ARARCPEKVR---DVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQNLR 472
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P ++L+L+ A L + +++ + +I A+ + MY EA I
Sbjct: 473 PNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTI 532
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA 416
F++ +K A A + S MI Y LA EM AA
Sbjct: 533 FDDMRK-AGCKANVV-TYTSLMIAYRMYDDAQLACEEMVAA 571
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 166/427 (38%), Gaps = 71/427 (16%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTD------ 113
+ G LN ++ G+ RK+ + + + G H+L V WM+++K + + TD
Sbjct: 38 IDGVLNCWL--GRFNRKN-FPALISEITRTGALEHSLRVFNWMKNQKCYRARTDIYNCMI 94
Query: 114 ------------------------------FAVYLDLTAKTNGIAAAEKYFNGLSE---- 139
+ +++ + A + F+ + +
Sbjct: 95 WLHARHQRADQARGLFYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQIFDDMLQAPKP 154
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
A +R +Y L+N +AL + ++M + + + +N + + + GQP
Sbjct: 155 IAPSRSSYNNLINACGSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAV 214
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNECEDKCRWTTYSNLA 257
+ + + + LD ++ + + + L + +F EM N CE T++ L
Sbjct: 215 AYYDHLISKKVPLDRYSHNIILNCLTKLGRFEDAINLFKEMRKMNGCEPDV--VTFNALL 272
Query: 258 SIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTF 314
+Y KA+ + E M P ++ L+ Y + +V G+L K+ F
Sbjct: 273 HVYALCGQITKAQETFDMMIGEGMAP-TIVTFNTLLGAYASQGMYTEALQVVGLLVKAKF 331
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA-A 373
P SY LL A K + ++ F+ + R ++ + ++ AY YE A
Sbjct: 332 EPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARE 391
Query: 374 LIFNNAKKR-------------ANASARFF-KSRESFMIYYLRSRQLDLALNEMEAALS- 418
L+ + A+ R A A AR K R+ F + + RQ+ L + AA++
Sbjct: 392 LLHDMAEARIEPNVVTICSLFAACARARCPEKVRDVF--HEAKVRQIALNVPAFNAAITA 449
Query: 419 --EAKQF 423
EA QF
Sbjct: 450 YIEAGQF 456
>gi|449457829|ref|XP_004146650.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 222
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 56/215 (26%)
Query: 38 FPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALE 97
+ T +D LY+R+S +G SVT L+ +++E V++D L + ++ LR + R++HALE
Sbjct: 23 YSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALE 82
Query: 98 VIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKE 157
V E YFN + K + ALLNCY E
Sbjct: 83 V--------------------------------EDYFNNMPSQLKRCQVHIALLNCYAHE 110
Query: 158 LMTERALALFEKMDEL-KFLGNTVAF--------NNLSTMYLRLGQ-PEKVRPLVNQMKQ 207
++A A+ +K+ E+ + L + + +L Q E+ +VN +++
Sbjct: 111 KYADKANAVLQKIKEMVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLRE 170
Query: 208 RNIS---LDNLTYIVWMQSYSHLNDIDGVERVFYE 239
++ S DN+ NDI G ER++ E
Sbjct: 171 KDDSHPARDNMP-----------NDIKGAERIYKE 194
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 9/240 (3%)
Query: 63 ALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
ALN + ME K VR +++ Y + L +GR+ A ++ M RK++ + F+ +D
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 120 LTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
K + AEK + + + + N +TY +L+N +C A + E M L
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
N V +N L + + + +K L +M QR + + +TY + + D D + VF
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYC 295
+M + TY+ L K KA + + L+ M+P D Y+ +I C
Sbjct: 452 KQMVSVGVHP-NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP-DIYTYNIMIEGMC 509
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 85/435 (19%), Positives = 159/435 (36%), Gaps = 59/435 (13%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG----IAAAEKY-FNGLSEYAKNRYTYGA 149
A+ + M + S +F+ L AK N I+ EK G+S N YTY
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISH---NLYTYNI 118
Query: 150 LLNCYCK---------------------ELMT--------------ERALALFEKMDELK 174
L+NC+C+ +++T A+AL ++M E+
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ +TV F L + + L+++M QR D +TY + D D
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK----AYHFL 290
+ +M + + YS + K + + AL EM+ + + Y L
Sbjct: 239 NLLNKM-EAAKIEANVVIYSTVIDSLCK---YRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 291 ISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS 349
IS CN +R+ +++ P ++ L+ A K + ++ +EE R
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 350 SYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA 409
++ +I + D EA + ++ + + + + +++++D
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN--VVTYNTLINGFCKAKRVDKG 412
Query: 410 LNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSL 468
+ E Q VT T F + +D D A+ K + S+ + Y++
Sbjct: 413 ME----LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 469 LIKTYIAAGKLASDM 483
L+ GKLA M
Sbjct: 469 LLDGLCKNGKLAKAM 483
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 12/283 (4%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G R D L Y + + K G + A+E+ E M+ RK+ + + V + K
Sbjct: 57 MVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKR 116
Query: 127 IAAAEKYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I AEK F +S NR T+ L++ YCK + A+ L E+M + K + + FN+
Sbjct: 117 IRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNS 176
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + + + E+ R ++N++K D TY + +D G Y
Sbjct: 177 LLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGK 236
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD- 301
K T S L + K EKAE LK L E + P + Y+ +++ YC ++D
Sbjct: 237 GVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEV-IYNTIVNGYCQIGDMDR 295
Query: 302 AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
A+ + + P ++ ++ ++ ID EEW
Sbjct: 296 AILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKA----EEW 334
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 145/372 (38%), Gaps = 15/372 (4%)
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDE 172
++ L+ K + AE+ L E+ Y ++N YC+ +RA+ E+M+
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMES 305
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
N +AFN++ + + +K V +M + I+ TY + + Y L
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR 365
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFL 290
++ EM E +K +Y +L + K +AE+ L+ + + P + Y+ L
Sbjct: 366 CFQILEEM-EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLP-NANIYNML 423
Query: 291 ISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS 349
I C L R + + K+ T +Y L++ L K+ + ++ F S
Sbjct: 424 IDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGH 483
Query: 350 SYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA 409
D+ + +I Y ++ ++ KK + +F + L S
Sbjct: 484 CPDVITYNSLISGYSNAGNSQKCLELYETMKKLG-----LKPTINTF--HPLISGCSKEG 536
Query: 410 LNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSL 468
+ E +E Q + P +V + ++E V A K + + D Y+
Sbjct: 537 IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNS 596
Query: 469 LIKTYIAAGKLA 480
LI ++ GKL+
Sbjct: 597 LILGHLKEGKLS 608
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTY 147
G + LE+ E M+ + + F + +K GI E FN + + + +R Y
Sbjct: 501 GNSQKCLELYETMKKLGLKPTINTFHPLISGCSK-EGIKLKETLFNEMLQMNLSPDRVVY 559
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
A+++CY + ++A +L ++M ++ + +N+L +L+ G+ + + LV+ MK
Sbjct: 560 NAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKA 619
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+ + + TY + +Q + L D +G + EM
Sbjct: 620 KGLIPEADTYSLLIQGHCDLKDFNGAYVWYREM 652
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 14/255 (5%)
Query: 88 KFGR-YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNR 144
K GR +R L V++ M S+ + F + L A+ + A+++F L Y
Sbjct: 257 KMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT 316
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY ALL + K + AL++ ++M+E ++V +N L Y+R G ++ ++
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M ++ + + +TY + +Y D ++FY M E TY+ + S+ K
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKK- 434
Query: 265 LFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDA-VNRVWGILKS-TFPPTN 318
++ +K L +MK +R ++ +++L C +D VNRV+ +KS F P
Sbjct: 435 --SRSNEMIKMLCDMKSNGCSPNRATWNTMLAL-CGNKGMDKFVNRVFREMKSCGFEPDR 491
Query: 319 TSYLVLLQALAKLNA 333
++ L+ A + +
Sbjct: 492 DTFNTLISAYGRCGS 506
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 128/285 (44%), Gaps = 12/285 (4%)
Query: 74 VRKDMLEYCVRSLRKFGRYRHALEVIEWM----ESRKMHFSYTDFAVYLDLTAKTNGIAA 129
+R D++ V+ L G + A+ + EW+ S + + +++ + + + +
Sbjct: 135 LRTDLVSL-VKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSV 193
Query: 130 AEKYFN--GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A K + L EY + Y +L+ Y + E+A+ LFE+M E+ V +N +
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 188 MYLRLGQP-EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
++ ++G+ K+ ++++M+ + + D T + + + + + F E+ C
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL-KSCGY 312
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTS-NLDAVN 304
+ TY+ L ++ KA ++ +A LK++EE P D Y+ L++ Y + +A
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 305 RVWGILKSTFPPTNTSYLVLLQALAKLNAID-ILKQCFEEWESRC 348
+ + K P +Y ++ A K D LK + E+ C
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 162/425 (38%), Gaps = 58/425 (13%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE------YA 141
K G Y AL V++ ME D Y +L A A K G+ E
Sbjct: 328 KAGVYTEALSVLKEMEENSCP---ADSVTYNELVAAYVR-AGFSKEAAGVIEMMTKKGVM 383
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
N TY +++ Y K + AL LF M E + NT +N + ++ + + ++ +
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+ MK S + T+ + + V RVF EM C + T++ L S Y
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM-KSCGFEPDRDTFNTLISAYG 502
Query: 262 KAELFEKAELALKKL-EEMKPRDRKA----YHFLISLYCNTSNLDAVNRVWGILKS-TFP 315
+ +E+ K+ EM A Y+ L++ + + V +KS F
Sbjct: 503 RC----GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 316 PTNTSYLVLLQALAK-LNAIDILK--------QCFEEW----ESRCSSYDMRLADVIIRA 362
PT TSY ++LQ AK N + I + Q F W +++ R RA
Sbjct: 559 PTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA 618
Query: 363 Y--LQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEA 420
+ +K Y+ +IFN S + + R+ D A E L
Sbjct: 619 FTLFKKHGYKPDMVIFN-----------------SMLSIFTRNNMYDQA----EGILESI 657
Query: 421 KQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL-KSLNCLDFSAYSLLIKTYIAAGKL 479
++ P VT ++ + + AEE K L KS D +Y+ +IK + G +
Sbjct: 658 REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLM 717
Query: 480 ASDMR 484
+R
Sbjct: 718 QEAVR 722
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 123 KTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
K +A +E+ F + Y + + ++L+ + + M ++A + E + E + V
Sbjct: 608 KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLV 667
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+N+L MY+R G+ K ++ +++ + D ++Y ++ + + R+ EM
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK-AYHFLISLYCNTSN 299
C + TY+ S Y +F + E ++ + + R + + ++ YC
Sbjct: 728 TERGIRPCIF-TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGK 786
Query: 300 ----LDAVNRVWGILKSTFPP 316
+D V+++ TF P
Sbjct: 787 YSEAMDFVSKI-----KTFDP 802
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 6/211 (2%)
Query: 130 AEKYFNG-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A++YFN LSE R+T+ ++ + E A FE M + + V +N +
Sbjct: 134 AKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMIN 193
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
Y R+ + E+ +MK RNI +TY ++ Y ++ +D R+ EM K
Sbjct: 194 GYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIK 252
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNR 305
TYS L AE +A + LK++ + + P D + LIS +C + NLDA
Sbjct: 253 PNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 306 VW-GILKSTFPPTNTSYLVLLQALAKLNAID 335
V +++ + P Y L++ K D
Sbjct: 313 VLKAMIRLSVPTEAGHYGXLIENFCKXGQYD 343
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY AL+N + + + AL +F M + L NT ++N L Y +G EK ++
Sbjct: 399 NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSML 458
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASIYV 261
M + + +TY + ++ Y D D RV M N C+ W +Y+ L S +
Sbjct: 459 TNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPD-EW-SYTELISGFC 516
Query: 262 KAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPP 316
K K ELA EM R + Y LIS YC LD R+ +K S P
Sbjct: 517 K---ISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRP 573
Query: 317 TNTSYLVLLQALAKLN 332
+Y VL+ L K N
Sbjct: 574 NVQTYNVLIHGLTKQN 589
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 153/409 (37%), Gaps = 27/409 (6%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
+ +L K G R A +I + M F+YT + + + +A + FN + E
Sbjct: 235 INALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGY---CRNRDLDSAFEIFNRMDE 291
Query: 140 YA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N TY L+N C AL +M L F +G+ E
Sbjct: 292 EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIED 351
Query: 198 VRPLVNQMKQRNISLDNLTY--IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
+ MK++ + TY ++ Q S + +F+ M + TY+
Sbjct: 352 AWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM-----AIGLFHRMSRDGVVP-NTVTYNA 405
Query: 256 LASIYVKAELFEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKS 312
L ++ ++ + A + + + P + +Y+ LI YC + + A++ + +LK
Sbjct: 406 LMNVLMENMEIDSALIVFNMMGKHGCLP-NTSSYNELIRGYCTIGDTEKAMSMLTNMLKG 464
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
PT +Y ++++ D+ + E ++ D +I + + E A
Sbjct: 465 RPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELA 524
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTV 432
+ +FN R + + + Y + +LD A +E K+ RP T
Sbjct: 525 SGMFNEMMDRGLCPNEV--TYTALISGYCKDEKLDCAARMLE----RMKRSGCRPNVQTY 578
Query: 433 DTFFRFFEEEKDVDGAEEFCKV-LKSLNCLDFSAYSLLIKTYIAAGKLA 480
+ ++ + GAEE CKV L+ D YS +I G +
Sbjct: 579 NVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIP 627
>gi|302142507|emb|CBI19710.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 19/281 (6%)
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKM 170
D++ +D+ AK N + AE+ ++E + T L++ Y K ERA FE +
Sbjct: 387 DYSKLIDVHAKENRVEDAERILKKMNENDILPDILTSTVLVHMYSKAGNLERAKEAFEGL 446
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
F +T +N++ Y+ GQP+ L+ +M+ R+I Y+ +QS++ DI
Sbjct: 447 RSQGFQPDTRVYNSMIMAYVNAGQPKLGESLMREMEARDIKPTKEIYMSLLQSFAQRGDI 506
Query: 231 DGVERVFYEMC----NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPRDR 284
G +R+ M + C + L Y +A ++A + + ++ +P DR
Sbjct: 507 GGAQRISTTMQFAGFQPSLESC-----TLLVEAYGQAGDPDQARNSFDYMIKVGHRPDDR 561
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAID----ILKQC 340
+ + A+N + + K F P +Y+VL+ L K+ +D +L +
Sbjct: 562 CTASMIAAYEKGNLLDKALNLLLQLEKDGFEPGVATYVVLVDWLGKMQLVDEAEQLLGKI 621
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
E+ E+ + + L D+ RA ++K + AL AKK
Sbjct: 622 AEQGEAPPLKFHVSLCDMYSRAGVEKKALQ--ALGVVEAKK 660
>gi|255551975|ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543667|gb|EEF45195.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 875
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 147/356 (41%), Gaps = 40/356 (11%)
Query: 57 GGSVTGALNAY-----IMEGKTVRKDMLEYCVRS--LRKFGRYRHALEVIEWMESRKMHF 109
GGS+ L A + E +D L RS L++ + A+E+ EW +SR
Sbjct: 142 GGSIPSILEALETIKNLDEALKPWEDTLSNKERSIILKEQCSWERAMEIFEWFKSRG--- 198
Query: 110 SYTDFAVYLDLTAKTNGIAAAEKYFNGL-SEYAKNRY-----TYGALLNCYCKELMTERA 163
Y ++ ++ + G A +Y L +E + R TYG L++ Y K + E+A
Sbjct: 199 CYELNVIHYNIMIRILGKAKQWRYLECLCNEMSFKRISPINSTYGTLIDVYSKGGLREKA 258
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL---------------------V 202
L EKM++ + V + MY + G+ +K V
Sbjct: 259 LDWLEKMNKQGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSLREALRHKVTGKASVRV 318
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+Q ++SL + TY + +Y I +F EM + T++ + I
Sbjct: 319 ENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRK-RILPTTVTFNTMIHICGN 377
Query: 263 AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTS 320
E+ L ++K+EE++ P D + Y+ LI ++ ++++ A + + K P S
Sbjct: 378 QGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQLQPDLVS 437
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
Y LL A + + ++ + E + + D + R Y++ M E++ L F
Sbjct: 438 YRTLLYAFSIRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAGMLEKSWLWF 493
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
YG L+N + + A++ + M GNTV +N+L +Y ++G + + +
Sbjct: 645 VYGVLINAFADSGCVKEAISYIDAMKGAGLPGNTVIYNSLIKLYTKVGYLREAQETYKLL 704
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ ++ + + + YS + + E +F M + + TY+ + +Y +
Sbjct: 705 QSSDVGPETYSSNCMIDLYSEQSMVKPAEEIFESMKRKGD--ANEFTYAMMLCMYKRLGW 762
Query: 266 FEKAELALKKLEEM 279
FE+A K++ E+
Sbjct: 763 FEQAIQIAKQMREL 776
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 9/246 (3%)
Query: 63 ALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
ALN + M+ K +R D+ Y + L +GR+ A ++ M RK++ + F+ +D
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 120 LTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
K + AEK ++ + + + + +TY +L+N +C + A +FE M
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
N V ++ L + + + E+ L +M QR + + +TY + + D D + VF
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYC 295
+M + TY+ L K KA + + L+ M+P D Y+ +I C
Sbjct: 457 KQMVSVGVHP-NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP-DIYTYNIMIEGMC 514
Query: 296 NTSNLD 301
++
Sbjct: 515 KAGKVE 520
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/412 (19%), Positives = 161/412 (39%), Gaps = 28/412 (6%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
++ K ++ + + E M++ + ++++++ + + ++ A + + Y
Sbjct: 92 AVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP 151
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ T +LLN YC A+AL ++M E+ + +T F L + + LV
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+QM QR D +TY + DID + +M + + + Y+ + K
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCK 270
Query: 263 AELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPT 317
++ + AL EM + D Y LIS CN +R+ +++ P
Sbjct: 271 ---YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
++ L+ A K + ++ ++E R D+ +I + D +EA +F
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF- 386
Query: 378 NAKKRANASARFFKSRESF--MIYYLRSRQLDLALNEMEAALSEAKQFHWRPM---QVTV 432
S++ F ++ Y + +E + ++ R + VT
Sbjct: 387 ----------ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 433 DTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKLASDM 483
T F + +D D A+ K + S+ + Y++L+ GKLA M
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 4/147 (2%)
Query: 74 VRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
V ++L Y + L K G+ A+ V E+++ M + + ++ K +
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 132 KYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
+ F LS + N Y +++ +C++ E A +L +KM E L N+ +N L
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLT 216
LR G E L+ +M+ + D T
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGDAST 610
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 94 HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALL 151
+A V + M S +H + + + LD K +A A F L S + YTY ++
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
CK E LF + N +A+N + + + R G E+ L+ +MK+
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 212 LDNLTY 217
++ TY
Sbjct: 571 PNSGTY 576
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 130/299 (43%), Gaps = 13/299 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
L K G AL++ ME R + S +++ +D K A FN + +
Sbjct: 249 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 308
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY +L+ C + + + +M + + V F+ L ++++ G+ + + L N
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVK 262
+M R I+ D +TY + + N + ++F M ++ CE TYS L + Y K
Sbjct: 369 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD--IVTYSILINSYCK 426
Query: 263 AELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPT 317
A+ + + ++ E+ + + Y+ L+ +C + L+A ++ ++ PP+
Sbjct: 427 AK---RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 483
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y +LL L ++ + FE+ + + + + ++II ++A +F
Sbjct: 484 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 542
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 9/264 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
GR A+ +++ M K + ++ ++ A + + EY + TY
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 242
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
G +LN CK + AL LF KM+E + V ++ + + G + L N+M+
Sbjct: 243 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 302
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--NECEDKCRWTTYSNLASIYVK-AE 264
+ I D +TY + + D ++ EM N D T+S L ++VK +
Sbjct: 303 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD---VVTFSALIDVFVKEGK 359
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLV 323
L E EL + + D Y+ LI +C + L N+++ ++ S P +Y +
Sbjct: 360 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 419
Query: 324 LLQALAKLNAIDILKQCFEEWESR 347
L+ + K +D + F E S+
Sbjct: 420 LINSYCKAKRVDDGMRLFREISSK 443
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 117/304 (38%), Gaps = 46/304 (15%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G+ + D++ + + K G+ A E+ M +R + + +D K N
Sbjct: 335 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 394
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A + F+ + + TY L+N YCK + + LF ++ + NT+ +N
Sbjct: 395 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 454
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + + G+ + L +M R + +TY + + DG +C+
Sbjct: 455 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL---------DG-------LCDNG 498
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVN 304
E + E+FEK + + L Y+ +I CN S +D
Sbjct: 499 E-------------LNKALEIFEKMQKSRMTL------GIGIYNIIIHGMCNASKVD--- 536
Query: 305 RVWGILKS----TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
W + S P +Y V++ L K ++ F + + + D +++I
Sbjct: 537 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
Query: 361 RAYL 364
RA+L
Sbjct: 597 RAHL 600
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 13/275 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG-LSEYA 141
+RS K G ++ +++V M+S + S F L + K A+ F+ LS Y
Sbjct: 163 IRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYG 222
Query: 142 --KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ YT+ L+ +CK M + F++M K + V +N L R G+
Sbjct: 223 VTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAH 282
Query: 200 PLVNQM--KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+VN M K N++ D +TY ++ Y ++ID VF EM ++ K TY+ L
Sbjct: 283 NVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGL-KPNEITYNTLI 341
Query: 258 SIYVKAELFEKA----ELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKS 312
+ + +K E AL + D + L++ +CN NL DA+ ++
Sbjct: 342 KGLCEVQKIDKIKQIFEGALGGGGFIP--DTCTLNTLMNAHCNAGNLNDALEVFEKMMVL 399
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
P + +Y VL++ L + + +Q F+E +
Sbjct: 400 NVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEK 434
>gi|225458257|ref|XP_002281331.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like
[Vitis vinifera]
Length = 720
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 19/281 (6%)
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKM 170
D++ +D+ AK N + AE+ ++E + T L++ Y K ERA FE +
Sbjct: 387 DYSKLIDVHAKENRVEDAERILKKMNENDILPDILTSTVLVHMYSKAGNLERAKEAFEGL 446
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
F +T +N++ Y+ GQP+ L+ +M+ R+I Y+ +QS++ DI
Sbjct: 447 RSQGFQPDTRVYNSMIMAYVNAGQPKLGESLMREMEARDIKPTKEIYMSLLQSFAQRGDI 506
Query: 231 DGVERVFYEMC----NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPRDR 284
G +R+ M + C + L Y +A ++A + + ++ +P DR
Sbjct: 507 GGAQRISTTMQFAGFQPSLESC-----TLLVEAYGQAGDPDQARNSFDYMIKVGHRPDDR 561
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAID----ILKQC 340
+ + A+N + + K F P +Y+VL+ L K+ +D +L +
Sbjct: 562 CTASMIAAYEKGNLLDKALNLLLQLEKDGFEPGVATYVVLVDWLGKMQLVDEAEQLLGKI 621
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
E+ E+ + + L D+ RA ++K + AL AKK
Sbjct: 622 AEQGEAPPLKFHVSLCDMYSRAGVEKKALQ--ALGVVEAKK 660
>gi|224058965|ref|XP_002299667.1| predicted protein [Populus trichocarpa]
gi|222846925|gb|EEE84472.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 13/283 (4%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGA 149
Y AL++++ + + + L + A N A+ YFN + + ++ N + Y +
Sbjct: 125 YSKALDLVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIFHYSS 184
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
LLN Y + ++A L + M + N V L +Y+R G EK R L+ ++
Sbjct: 185 LLNAYSSDGNYKKAEELVQDMKSSGLVPNKVILTTLLKVYVRGGLFEKSRDLLVELDTLG 244
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ + + Y + M + +D VF EM E K +YS + S + + LFE+A
Sbjct: 245 FAKNEMPYCLLMDGLAKNGLLDEARSVFNEM-KEKRVKSGGYSYSIMISSFCRGGLFEEA 303
Query: 270 -ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK--STFPPTNTSYLVL-- 324
ELA + + D + ++ YC T ++V R + + P NT ++++
Sbjct: 304 KELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKMDELAISPDYNTFHILIKY 363
Query: 325 -----LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
L LA D+ ++ + E CSS + L + A
Sbjct: 364 FCKEKLYMLAYQTMEDMHRKGHQPMEELCSSLILHLGKIKAHA 406
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 122/322 (37%), Gaps = 47/322 (14%)
Query: 86 LRKFG---RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
LR FG R++ ++ +WM+ + + + + N A E Y + E K
Sbjct: 11 LRNFGEQCRWQDLSQLFDWMQRHNKISASSYSSYIKFMGTSLNPAKALEIYHSIPDESTK 70
Query: 143 -NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL---------------- 185
N + +LL C + + ++ F KM + + ++ L
Sbjct: 71 TNVFICNSLLRCLVRNTKFDSSMKFFHKMKNNGLTPDAITYSTLLAGCMKIKDGYSKALD 130
Query: 186 -------------STMYLRL-------GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
S MY L + E+ + NQMK S + Y + +YS
Sbjct: 131 LVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIFHYSSLLNAYS 190
Query: 226 HLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PR 282
+ E + +M + +K TT L +YV+ LFEK+ L +L+ + +
Sbjct: 191 SDGNYKKAEELVQDMKSSGLVPNKVILTT---LLKVYVRGGLFEKSRDLLVELDTLGFAK 247
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ Y L+ LD V+ +K SY +++ + + + K+
Sbjct: 248 NEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKSGGYSYSIMISSFCRGGLFEEAKELA 307
Query: 342 EEWESRCSSYDMRLADVIIRAY 363
EE+E++ YD+ + + I+ AY
Sbjct: 308 EEFEAKYDKYDVVILNTILCAY 329
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T G ++N YC+E E AL F +M EL N FN+L +L + + V +V
Sbjct: 530 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ M++ + D +T+ M ++S + D+ E ++ +M D +S LA Y +
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP-DIHAFSILAKGYAR 648
Query: 263 AELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVW----GILKSTFPPT 317
A EKAE L ++ + R Y +IS +C+ + +V+ GI+ P
Sbjct: 649 AGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV--GLSPN 706
Query: 318 NTSYLVLLQALAK 330
T+Y L+ +
Sbjct: 707 LTTYETLIWGFGE 719
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 2/190 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G+ AL M+ +H + F + N + + + + E+ + T+
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L+N + +R ++ M E + AF+ L+ Y R G+PEK ++NQM++
Sbjct: 605 STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
+ + + Y + + ++ +V+ +MC TTY L + +A+
Sbjct: 665 FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPW 724
Query: 268 KAELALKKLE 277
KAE LK +E
Sbjct: 725 KAEELLKDME 734
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 130/299 (43%), Gaps = 13/299 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
L K G AL++ ME R + S +++ +D K A FN + +
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY +L+ C + + + +M + + V F+ L ++++ G+ + + L N
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVK 262
+M R I+ D +TY + + N + ++F M ++ CE TYS L + Y K
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD--IVTYSILINSYCK 397
Query: 263 AELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPT 317
A+ + + ++ E+ + + Y+ L+ +C + L+A ++ ++ PP+
Sbjct: 398 AK---RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y +LL L ++ + FE+ + + + + ++II ++A +F
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 9/264 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
GR A+ +++ M K + ++ ++ A + + EY + TY
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
G +LN CK + AL LF KM+E + V ++ + + G + L N+M+
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--NECEDKCRWTTYSNLASIYVK-AE 264
+ I D +TY + + D ++ EM N D T+S L ++VK +
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD---VVTFSALIDVFVKEGK 330
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLV 323
L E EL + + D Y+ LI +C + L N+++ ++ S P +Y +
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 324 LLQALAKLNAIDILKQCFEEWESR 347
L+ + K +D + F E S+
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSK 414
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 117/304 (38%), Gaps = 46/304 (15%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G+ + D++ + + K G+ A E+ M +R + + +D K N
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A + F+ + + TY L+N YCK + + LF ++ + NT+ +N
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + + G+ + L +M R + +TY + + DG +C+
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL---------DG-------LCDNG 469
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVN 304
E + E+FEK + + L Y+ +I CN S +D
Sbjct: 470 E-------------LNKALEIFEKMQKSRMTL------GIGIYNIIIHGMCNASKVD--- 507
Query: 305 RVWGILKS----TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
W + S P +Y V++ L K ++ F + + + D +++I
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 361 RAYL 364
RA+L
Sbjct: 568 RAHL 571
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 6/308 (1%)
Query: 89 FGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYT 146
GR A + + M R + + F + +D K I+ A F ++E + YT
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y AL++ YC + A LF MD N ++N L + + G+ ++ + L+ +M
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMS 247
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
++++ D TY M+ + + + + EMC+ TYS + K
Sbjct: 248 HKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLP-NLITYSIVLDGLCKHGHL 306
Query: 267 EKAELALKKLEEMKPRDRK-AYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVL 324
++A LK ++E K Y LI C L+A ++ + PT +Y V+
Sbjct: 307 DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVM 366
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK-DMYEEAALIFNNAKKRA 383
+ L K + + F E + +VII+ +L+ D LI K
Sbjct: 367 ISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGF 426
Query: 384 NASARFFK 391
+A + F+
Sbjct: 427 SADSSTFR 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 11/253 (4%)
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I A K F+ + + + + TY ++N CK T AL L +KM+E N VA+N
Sbjct: 26 IMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNT 85
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--N 242
+ + + ++M + I D TY + + +L ++ +F +M N
Sbjct: 86 IIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERN 145
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL 300
+K T++ L K + +A L + + E ++P D Y+ L+ YC+ S +
Sbjct: 146 VIPNK---VTFTILIDGLCKKRMISEAWLVFETMTEKGLEP-DVYTYNALVDGYCSRSQM 201
Query: 301 DAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
D +++ I+ + P SY +L+ K ID K E + + D+ +
Sbjct: 202 DEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTL 261
Query: 360 IRAYLQKDMYEEA 372
+R + Q +EA
Sbjct: 262 MRGFCQVGRPQEA 274
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 179/418 (42%), Gaps = 21/418 (5%)
Query: 66 AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTD-FAVYLDLTA 122
A +++ + V+ + C V+S+ + +R ALEV EW+ R + + L +
Sbjct: 173 ADVLDDRKVQMTPTDLCFVVKSVGQESWHR-ALEVYEWLNLRHWYSPNARMLSTILSVLG 231
Query: 123 KTNGIAAAEKYFNGLSEYAKNRY-TYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
K N A A + F A N Y A++ Y + + L + M E + V+
Sbjct: 232 KANQEALAVEVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVS 291
Query: 182 FNNLSTMYLRLG--QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
FN L L+ G P L+N++++ + D +TY + + S ++++ +VF +
Sbjct: 292 FNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDD 351
Query: 240 M-CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK--PRDRKAYHFLISLYCN 296
M + C+ W TY+ + S+Y + L KAE LE P D +Y+ L+ +
Sbjct: 352 MEAHHCQPDL-W-TYNAMISVYGRCGLSGKAEQLFNDLESRGFFP-DAVSYNSLLYAFAR 408
Query: 297 TSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
N++ V +W ++K F +Y ++ K ++ Q + + +S + D
Sbjct: 409 EGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVT 468
Query: 356 ADVIIRAYLQKDMYEEAALIFNNAKKRANASAR-FFKSRESFMIYYLRSRQLDLALNEME 414
V+I + + + EAA + + + N + K+ + + Y ++ + A +
Sbjct: 469 YTVLIDSLGKTNKIAEAAGVMS---EMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFD 525
Query: 415 AALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKT 472
L + V +D RF E ++ + +E +L LD S Y L+++T
Sbjct: 526 CMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKE---MLHDGITLDHSLYELMLRT 580
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 13/193 (6%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA-----EKYFNGLSEYAK 142
K G+ AL++ M+S + + V +D KTN IA A E G+ K
Sbjct: 443 KQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLK 502
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
TY AL+ Y K A F+ M + +A++ + ++LR +P++ L
Sbjct: 503 ---TYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLY 559
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+M I+LD+ Y + +++ +N ++ + RV +M E+ C T + ++SI VK
Sbjct: 560 KEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDM----EEICGMNTQT-ISSILVK 614
Query: 263 AELFEKAELALKK 275
E +++A L++
Sbjct: 615 GECYDEAAKMLRR 627
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 116/266 (43%), Gaps = 6/266 (2%)
Query: 65 NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
N + +G + D + +++L GR V++ ++ S + + LD A+
Sbjct: 837 NTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARA 896
Query: 125 NGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
I +K ++G+ + Y + Y + + A+ +M+E F + +
Sbjct: 897 GNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIW 956
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N++ MY+ + K + ++K+ + D TY + Y + + + +EM
Sbjct: 957 NSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEM-R 1015
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLD 301
+ + TY +L + + K +L E+AE ++L+ + DR YH ++ +Y N+ +
Sbjct: 1016 VAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHS 1075
Query: 302 AVNRVWGILKSTF--PPTNTSYLVLL 325
R++ ++K P T +L+++
Sbjct: 1076 KAERLFSMMKDAGVEPTIATMHLLMV 1101
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 131/325 (40%), Gaps = 46/325 (14%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLN 152
A+E++ + + + + ++ + + A K F+ + + + +TY A+++
Sbjct: 310 AIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMIS 369
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM------- 205
Y + ++ +A LF ++ F + V++N+L + R G EKV+ + +M
Sbjct: 370 VYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGK 429
Query: 206 ---------------KQRNISL-------------DNLTYIVWMQSYSHLNDIDGVERVF 237
Q ++L D +TY V + S N I V
Sbjct: 430 DEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVM 489
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYC 295
EM N K TYS L Y KA +AE + ++P D AY ++ ++
Sbjct: 490 SEMLNTGV-KPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRP-DHLAYSVMLDIHL 547
Query: 296 NTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ ++ +L ++ Y ++L+ L K+N ++ + + + E C
Sbjct: 548 RFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDMEEICGMNTQT 607
Query: 355 LADVIIRAYLQKDMYEEAALIFNNA 379
++ ++++ + Y+EAA + A
Sbjct: 608 ISSILVKG----ECYDEAAKMLRRA 628
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 81/438 (18%), Positives = 175/438 (39%), Gaps = 66/438 (15%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR----- 144
GR+ AL+++E+++ S + + K + AA L EY+ NR
Sbjct: 651 GRHAEALDLLEFLKEHSPRSSQMITEALVVMLCKAQQLDAA------LKEYSNNRELGFT 704
Query: 145 ---YTYGALLNCYCK-ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +L+ C + EL+TE A +F M + + ++ +Y ++G PE
Sbjct: 705 GSFTMFESLIQCCLENELITE-ASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHH 763
Query: 201 LVNQMKQRNISLDNLT-YIVWMQSYSHLNDIDGVERVFYEMCNEC--EDKCRWTTYSNLA 257
L++ + I L+N++ Y+ +++Y L E V + C D+ W L
Sbjct: 764 LIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNA---LI 820
Query: 258 SIYVKAELFEKAE-----------------------------------LALKKLEEMKPR 282
Y + +E+A + +++L++M +
Sbjct: 821 EAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFK 880
Query: 283 DRKAYHFL-ISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
K+ L + + N+ V +++ G+ + + PT Y V+ + L++ + ++
Sbjct: 881 ISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAM 940
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY 400
E E D+ + + +++ Y+ + + + ++ K+ + + ++ Y
Sbjct: 941 LSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDE--DTYNTLIVMY 998
Query: 401 LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC 460
R + + + M E + P T + F +++ V+ AEE + L+S C
Sbjct: 999 CRDHRPEEGFSLMH----EMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGC 1054
Query: 461 -LDFSAYSLLIKTYIAAG 477
LD S Y ++K Y +G
Sbjct: 1055 KLDRSFYHTMMKIYRNSG 1072
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 63 ALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
ALN + ME K +R +++ Y + L +GR+ A ++ M RK++ F+ +D
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 120 LTAKTNGIAAAEKYFNGLSEYAKNR--YTYGALLNCYCKELMTERALALFEKMDELKFLG 177
K + AEK ++ + + + + TY +L+N +C + A +FE M
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ V +N L + + + E+ + +M QR + + +TY + +Q D D + +F
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYC 295
EM ++ TY+ L K EKA + + L+ +M+P Y+ +I C
Sbjct: 455 KEMVSDGVPP-NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT-IYTYNIMIEGMC 512
Query: 296 NTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ D + + P +Y ++ + + + F+E + + +
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 355 LADVIIRAYLQKDMYEEAA 373
+ +IRA L+ E +A
Sbjct: 573 CYNTLIRARLRDGDREASA 591
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 31/399 (7%)
Query: 100 EWMESRKMHFSYTDFAVYLDLTAKTNG----IAAAEKYFN-GLSEYAKNRYTYGALLNCY 154
E ++SR S +F+ L AK N I+ E+ N G+ N YTY L+NC+
Sbjct: 71 EMVKSRPFP-SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH---NHYTYSILINCF 126
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM-----KQRN 209
C+ ALA+ KM +L + N V ++L Y + + LV+QM +
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
++ + L + +++ + + + ++R+ + C TY + + K + A
Sbjct: 187 VTFNTLIHGLFLHNKAS-EAMALIDRMVAKGCQP-----DLVTYGVVVNGLCKRGDTDLA 240
Query: 270 ELALKKLEEMKPRDRK-AYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQA 327
L K+E+ K Y+ +I C ++ DA+N + P +Y L+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASA 387
L + + R + D+ +I A++++ EA +++ KR+ +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 388 RFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDV-D 446
+ S + + +LD A E +S+ H P VT +T + F + K V +
Sbjct: 361 --IVTYSSLINGFCMHDRLDEAKQMFEFMVSK----HCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 447 GAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
G E F ++ + + Y++LI+ AG DM Q
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGD--CDMAQ 451
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 104/235 (44%), Gaps = 9/235 (3%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +++ CK + AL LF++M+ N V +++L + G+ L++ M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
+R I+ D T+ + ++ + E+++ EM D TYS+L + + +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP-SIVTYSSLINGFCMHDRL 377
Query: 267 EKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-SY 321
++A+ + E M + D Y+ LI +C ++ V+ + NT +Y
Sbjct: 378 DEAK---QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+L+Q L + D+ ++ F+E S ++ + ++ + E+A ++F
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 120/299 (40%), Gaps = 11/299 (3%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
++ K ++ + + E M++ + ++ +++ ++ + + + A + + Y
Sbjct: 90 AIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP 149
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T +LLN YC A+AL ++M + NTV FN L + + L+
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED---KCRWTTYSNLASI 259
++M + D +TY V + D D + + + N+ E + Y+ +
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTD----LAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 260 YVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPT 317
K + + A K++E R + Y LIS CN +R+ +++ P
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++ L+ A K + ++ ++E R + +I + D +EA +F
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAK 142
L K G+ A+ V E+++ KM + + + ++ K + F LS
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y +++ +C++ E A ALF++M E L N+ +N L LR G E L+
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Query: 203 NQMKQRNISLDNLT 216
+M+ + D T
Sbjct: 595 KEMRSCGFAGDAST 608
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 10/315 (3%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ K + D+ Y ++ L F R++ A ++ M S + + F V +D K
Sbjct: 261 MKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGK 320
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
++ A+ F ++E + TY +L+ Y + A LF+ M + ++N
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L Y + + ++ + L N+M + ++ DN+ Y + L + + +F M +
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM-HSN 439
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDA 302
+ TYS L + K KA + ++ +KP D Y+ LI C NL
Sbjct: 440 GNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP-DIAMYNILIDAMCKFGNLKD 498
Query: 303 VNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
+++ + P Y ++ L K +D + F E D +VIIR
Sbjct: 499 ARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIR 558
Query: 362 AYLQ-KDMYEEAALI 375
+LQ KD A LI
Sbjct: 559 GFLQYKDESRAAQLI 573
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 118/293 (40%), Gaps = 10/293 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K G++ A+E + E+ + + ++ K AA F + E
Sbjct: 172 INGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGC 231
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY L++ CK+ + AL +F M + + +N+L + ++
Sbjct: 232 QPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASA 291
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+N+M NI + T+ V + + + + VF M E + TYS+L Y
Sbjct: 292 LLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM-TEMGVEPDVVTYSSLMYGY 350
Query: 261 -VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTN 318
++ E+ E +L + + D +Y+ LI YC +D +++ ++ P N
Sbjct: 351 SLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDN 410
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCS-----SYDMRLADVIIRAYLQK 366
+Y L+ L +L + + F+ S + +Y M L YL K
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGK 463
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 5/239 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N +T+ L++ CKE A +F+ M E+ + V +++L Y + + R L
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLF 363
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIY 260
+ M + D +Y + ++ Y ID +++F EM ++ D + T + +
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTL--IHGLC 421
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF-PPTNT 319
L E +L D Y L+ +C L R++ +++ST+ P
Sbjct: 422 QLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIA 481
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
Y +L+ A+ K + ++ F E + ++++ II ++ + +EA F N
Sbjct: 482 MYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRN 540
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T G ++N YC+E E AL F +M EL N FN+L +L + + V +V
Sbjct: 553 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 612
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ M++ + D +T+ M ++S + D+ E ++ +M D +S LA Y +
Sbjct: 613 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP-DIHAFSILAKGYAR 671
Query: 263 AELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVW----GILKSTFPPT 317
A EKAE L ++ + R Y +IS +C+ + +V+ GI+ P
Sbjct: 672 AGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV--GLSPN 729
Query: 318 NTSYLVLLQALAK 330
T+Y L+ +
Sbjct: 730 LTTYETLIWGFGE 742
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 2/190 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G+ AL M+ +H + F + N + + + + E+ + T+
Sbjct: 568 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 627
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L+N + +R ++ M E + AF+ L+ Y R G+PEK ++NQM++
Sbjct: 628 STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 687
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
+ + + Y + + ++ +V+ +MC TTY L + +A+
Sbjct: 688 FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPW 747
Query: 268 KAELALKKLE 277
KAE LK +E
Sbjct: 748 KAEELLKDME 757
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNTITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A + LK++ + + P D + LIS +C + N DA V ++
Sbjct: 259 STLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNPDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y L+ K+ D
Sbjct: 319 RLSVPTEAGHYGXLIXNFCKVGQYD 343
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 127 IAAAEKYFNGLSEYAKN--RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I A+ + + +Y N RYTY L++ CK + A+ LFE++ E TV +N+
Sbjct: 254 IQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNS 313
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L Y LG +V ++ M+ + I D +TY + + + D++ ++ ++ ++
Sbjct: 314 LINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQ- 372
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAV 303
+ TYS L + K L +AE L ++ + D AY LI YC ++
Sbjct: 373 GLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERA 432
Query: 304 NRVWGIL--KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
V ++ PT+ ++L +L L K + + E + D+ L +V+I
Sbjct: 433 LEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVID 492
Query: 362 AY 363
Y
Sbjct: 493 GY 494
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 63 ALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
ALN + ME K +R +++ Y + L +GR+ A ++ M RK++ F+ +D
Sbjct: 70 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 129
Query: 120 LTAKTNGIAAAEKYFNGLSEYAKNR--YTYGALLNCYCKELMTERALALFEKMDELKFLG 177
K + AEK ++ + + + + TY +L+N +C + A +FE M
Sbjct: 130 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 189
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ V +N L + + + E+ + +M QR + + +TY + +Q D D + +F
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 249
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYC 295
EM ++ TY+ L K EKA + + L+ +M+P Y+ +I C
Sbjct: 250 KEMVSDGVPP-NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT-IYTYNIMIEGMC 307
Query: 296 NTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ D + + P +Y ++ + + + F+E + + +
Sbjct: 308 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 367
Query: 355 LADVIIRAYLQKDMYEEAA 373
+ +IRA L+ E +A
Sbjct: 368 CYNTLIRARLRDGDREASA 386
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 104/235 (44%), Gaps = 9/235 (3%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +++ CK + AL LF++M+ N V +++L + G+ L++ M
Sbjct: 54 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 113
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
+R I+ D T+ + ++ + E+++ EM D TYS+L + + +
Sbjct: 114 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP-SIVTYSSLINGFCMHDRL 172
Query: 267 EKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-SY 321
++A+ + E M + D Y+ LI +C ++ V+ + NT +Y
Sbjct: 173 DEAK---QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 229
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+L+Q L + D+ ++ F+E S ++ + ++ + E+A ++F
Sbjct: 230 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 284
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAK 142
L K G+ A+ V E+++ KM + + + ++ K + F LS
Sbjct: 270 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 329
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y +++ +C++ E A ALF++M E L N+ +N L LR G E L+
Sbjct: 330 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 389
Query: 203 NQMKQRNISLDNLT 216
+M+ + D T
Sbjct: 390 KEMRSCGFAGDAST 403
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 17/240 (7%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TYG ++N CK T+ A L KM++ K + +N + + + L +M
Sbjct: 18 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 77
Query: 206 KQRNISLDNLTY---IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ + I + +TY I + +Y +D R+ +M E + T+S L +VK
Sbjct: 78 ETKGIRPNVVTYSSLISCLCNYGRWSD---ASRLLSDMI-ERKINPDVFTFSALIDAFVK 133
Query: 263 AELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVWGIL--KSTFPP 316
+AE K +EM R Y LI+ +C LD +++ + K FP
Sbjct: 134 EGKLVEAE---KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
T Y L++ K ++ + F E R + +++I+ Q + A IF
Sbjct: 191 VVT-YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 249
>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 484
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELXVERTIKSYNALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVZEMKGXG-IKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
S L AE +A + LK++ + + P D + LI +C + NLDA V +
Sbjct: 259 STLLPGLCNAEKMSEARVJLKEMMDKYLAPTDNSIFMRLIXSHCKSGNLDAAADVLKAMI 318
Query: 312 STFPPTNTSYL-VLLQALAKLNAID 335
PT + L++ K+ D
Sbjct: 319 RLSVPTEAGHXGXLIENFCKVGQYD 343
>gi|413923718|gb|AFW63650.1| hypothetical protein ZEAMMB73_248832 [Zea mays]
Length = 478
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 100 EWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELM 159
E M M+ + +D A+ LDL AK+ + AA+KYF L E +K + Y ALLN Y K LM
Sbjct: 205 EVMVRSGMNPTVSDQAILLDLIAKSRCVVAAKKYFLDLPETSKTYFRYHALLNSYSKVLM 264
Query: 160 TERALALFEKMDELKF 175
E+A +L EKM+EL F
Sbjct: 265 IEKAESLVEKMEELNF 280
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 117/273 (42%), Gaps = 6/273 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + ++ +++YFN
Sbjct: 80 EDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFN 139
Query: 136 GLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ R+T+ L+ + E A FE + + + V +N + Y R+
Sbjct: 140 KMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREITPDVVTYNTMINGYTRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK++ I +TY ++ Y+ ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMKG-LGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P+D + LIS C NLDA V ++
Sbjct: 259 STLLPGLCDAEKMSEARSLLKEMVDKYIAPKDNSIFIRLISSQCKAGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
+ + P Y VL++ K D + F++
Sbjct: 319 RLSIPTEAGHYGVLIENYCKAGKYDQAVKLFDK 351
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 116/270 (42%), Gaps = 11/270 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--- 139
+RS G ++ ++ + + M+ + S F L + K A F+ +
Sbjct: 148 IRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYG 207
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ YT+ L++ +CK M ++A +F++M+ + V +N + R G+ +
Sbjct: 208 VTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAH 267
Query: 200 PLVNQM--KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
L+N M K + + ++Y ++ Y +ID VF+EM K TY+ L
Sbjct: 268 NLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGL-KPNAVTYNTLI 326
Query: 258 SIYVKAELFEKAE---LALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKST 313
+A +++ + + P D ++ LI +C+ +LDA +V+ +L
Sbjct: 327 KGLSEAHRYDEIKGFLIGGDAFTTFSP-DACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 385
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
P + SY VL++ L N D + F E
Sbjct: 386 LHPDSASYSVLIRTLCLRNEFDKAETLFNE 415
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 135/315 (42%), Gaps = 32/315 (10%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA-------EKYFN 135
+++LR L +W+ ++ F + L+ + + AA EK N
Sbjct: 75 LQTLRLIKVPADGLRFFDWVYNKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSN 134
Query: 136 GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
G + ++RY + +L+ Y + + ++ LF+ M ++ + + FN+L ++ L+ G+
Sbjct: 135 GCVKL-QDRY-FNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRT 192
Query: 196 EKVRPLVNQMKQR-NISLDNLTYIVWMQSYSHLNDIDGVERVFYEM----CNECEDKCRW 250
+ ++M++ ++ D+ T+ + + + +D +F EM CN
Sbjct: 193 GMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNP-----DV 247
Query: 251 TTYSNLASIYVKAELFEKAELA-------LKKLEEMKPRDRKAYHFLISLYCNTSNLDAV 303
TY+ + +A K ++A LKK + P + +Y L+ YC +D
Sbjct: 248 VTYNTIIDGLCRA---GKVKIAHNLLNGMLKKATAVHP-NIVSYTTLLRGYCMKQEIDEA 303
Query: 304 NRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS-SYDMRLADVIIR 361
V+ +L P +Y L++ L++ + D +K ++ + S D +++I+
Sbjct: 304 LLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIK 363
Query: 362 AYLQKDMYEEAALIF 376
A+ + A +F
Sbjct: 364 AHCDAGHLDAAMKVF 378
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 10/277 (3%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R F E K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALR-FVEEMKGFGMKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGIL 310
S L AE +A LK++ + + P D + LIS C +LD A N + ++
Sbjct: 259 STLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEE 343
+ + P Y VL++ K AI +L + E+
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEK 355
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 63 ALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
ALN + ME K +R +++ Y + L +GR+ A ++ M RK++ F+ +D
Sbjct: 889 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 948
Query: 120 LTAKTNGIAAAEKYFNGLSEYAKNR--YTYGALLNCYCKELMTERALALFEKMDELKFLG 177
K + AEK ++ + + + + TY +L+N +C + A +FE M
Sbjct: 949 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 1008
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ V +N L + + + E+ + +M QR + + +TY + +Q D D + +F
Sbjct: 1009 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 1068
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYC 295
EM ++ TY+ L K EKA + + L+ +M+P Y+ +I C
Sbjct: 1069 KEMVSDGVPP-NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT-IYTYNIMIEGMC 1126
Query: 296 NTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ D + + P +Y ++ + + + F+E + + +
Sbjct: 1127 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 1186
Query: 355 LADVIIRAYLQKDMYEEAA 373
+ +IRA L+ E +A
Sbjct: 1187 CYNTLIRARLRDGDREASA 1205
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 108/272 (39%), Gaps = 19/272 (6%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
+E K +R +++ Y V L R+ A ++ M +K+ + ++ LD K
Sbjct: 319 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 378
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A++ F + + + TY +L+N C + A +F+ M L + V++N
Sbjct: 379 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 438
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + + + E L +M QR + + +TY +Q + D+D + F +M
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 498
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL 300
WT L + EL E AL E+M+ R D Y +I C T
Sbjct: 499 ISPDIWTYNILLGGLCDNGEL----EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK- 553
Query: 301 DAVNRVWGILKS----TFPPTNTSYLVLLQAL 328
V W + S P +Y ++ L
Sbjct: 554 --VEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 102/240 (42%), Gaps = 3/240 (1%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y +R T G+L+N +C+ A++L +KM E+ + + VA+N + + +
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 313
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+++++ I + +TY + + + R+ +M + + TYS L
Sbjct: 314 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDA 372
Query: 260 YVK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
+VK ++ E EL + + D Y LI+ C +D N+++ ++ S +
Sbjct: 373 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 432
Query: 319 -TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
SY L+ K ++ + F E R + + +I+ + Q ++A F+
Sbjct: 433 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 492
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 10/171 (5%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y L+N +CK E + LF +M + + NTV +N L + + G +K + +QM
Sbjct: 435 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
IS D TY + + +++ +F +M + E TY+ + K
Sbjct: 495 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-QKREMDLDIVTYTTVIRGMCKTGK 553
Query: 266 FEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
E+A L+LK L KP D Y ++S C L V ++ +K
Sbjct: 554 VEEAWSLFCSLSLKGL---KP-DIVTYTTMMSGLCTKGLLHEVEALYTKMK 600
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 31/399 (7%)
Query: 100 EWMESRKMHFSYTDFAVYLDLTAKTNG----IAAAEKYFN-GLSEYAKNRYTYGALLNCY 154
E ++SR S +F+ L AK N I+ E+ N G+ N YTY L+NC+
Sbjct: 685 EMVKSRPFP-SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH---NHYTYSILINCF 740
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM-----KQRN 209
C+ ALA+ KM +L + N V ++L Y + + LV+QM +
Sbjct: 741 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 800
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
++ + L + +++ + + + ++R+ + C TY + + K + A
Sbjct: 801 VTFNTLIHGLFLHNKAS-EAMALIDRMVAKGCQP-----DLVTYGVVVNGLCKRGDTDLA 854
Query: 270 ELALKKLEEMKPRDRK-AYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQA 327
L K+E+ K Y+ +I C ++ DA+N + P +Y L+
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASA 387
L + + R + D+ +I A++++ EA +++ KR+ +
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974
Query: 388 RFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDV-D 446
+ S + + +LD A E +S+ H P VT +T + F + K V +
Sbjct: 975 --IVTYSSLINGFCMHDRLDEAKQMFEFMVSK----HCFPDVVTYNTLIKGFCKYKRVEE 1028
Query: 447 GAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
G E F ++ + + Y++LI+ AG DM Q
Sbjct: 1029 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGD--CDMAQ 1065
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 125/293 (42%), Gaps = 17/293 (5%)
Query: 94 HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL-- 151
A+ +I+ M ++ + V ++ K A FN L++ + + G L+
Sbjct: 818 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA---FNLLNKMEQGKLEPGVLIYN 874
Query: 152 ---NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
+ CK + AL LF++M+ N V +++L + G+ L++ M +R
Sbjct: 875 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 934
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
I+ D T+ + ++ + E+++ EM D TYS+L + + + ++
Sbjct: 935 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP-SIVTYSSLINGFCMHDRLDE 993
Query: 269 AELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-SYLV 323
A+ + E M + D Y+ LI +C ++ V+ + NT +Y +
Sbjct: 994 AK---QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
L+Q L + D+ ++ F+E S ++ + ++ + E+A ++F
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 1103
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 120/299 (40%), Gaps = 11/299 (3%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
++ K ++ + + E M++ + ++ +++ ++ + + + A + + Y
Sbjct: 704 AIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP 763
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T +LLN YC A+AL ++M + NTV FN L + + L+
Sbjct: 764 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 823
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED---KCRWTTYSNLASI 259
++M + D +TY V + D D + + + N+ E + Y+ +
Sbjct: 824 DRMVAKGCQPDLVTYGVVVNGLCKRGDTD----LAFNLLNKMEQGKLEPGVLIYNTIIDG 879
Query: 260 YVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPT 317
K + + A K++E R + Y LIS CN +R+ +++ P
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 939
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++ L+ A K + ++ ++E R + +I + D +EA +F
Sbjct: 940 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 132/343 (38%), Gaps = 55/343 (16%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG-QPEKVR--PL 201
YT+ ++NC+C AL++ KM L+LG +P++V L
Sbjct: 224 YTFNIVINCFCCCFQVSLALSILGKM-------------------LKLGYEPDRVTIGSL 264
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
VN +RN D ++ + M + DI + +C T N A +
Sbjct: 265 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK--------TKRVNDAFDFF 316
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTS 320
K E+ K ++P + Y L++ CN+S DA + ++K P +
Sbjct: 317 K-EIERKG---------IRP-NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y LL A K + K+ FEE D+ +I D +EA +F+
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425
Query: 381 KRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFE 440
+ + S + + + ++++++ + E Q VT +T + F
Sbjct: 426 SKGCLAD--VVSYNTLINGFCKAKRVEDGMK----LFREMSQRGLVSNTVTYNTLIQGFF 479
Query: 441 EEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTY-IAAGKLASD 482
+ DVD A+EF + +DF S I TY I G L +
Sbjct: 480 QAGDVDKAQEF------FSQMDFFGISPDIWTYNILLGGLCDN 516
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAK 142
L K G+ A+ V E+++ KM + + + ++ K + F LS
Sbjct: 1089 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 1148
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y +++ +C++ E A ALF++M E L N+ +N L LR G E L+
Sbjct: 1149 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 1208
Query: 203 NQMKQRNISLDNLT 216
+M+ + D T
Sbjct: 1209 KEMRSCGFAGDAST 1222
>gi|224073298|ref|XP_002304067.1| predicted protein [Populus trichocarpa]
gi|222841499|gb|EEE79046.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 118/279 (42%), Gaps = 13/279 (4%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGA 149
Y AL++++ + + + L + A N A+ YFN + + ++ N Y Y +
Sbjct: 7 YSKALDLVQELNYNGLQMDSVMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIYHYSS 66
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
LLN Y ++A L + M + N V +Y+R EK R L+ ++
Sbjct: 67 LLNAYASGGNYKKAEELVQDMKSSGLVPNKVMLTTQLKVYVRGRLFEKSRDLLVELDTLG 126
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ D + Y + M + ID VF EM +C K +YS + S + + LFE+A
Sbjct: 127 FAKDEMPYCLLMDGLAKTGCIDEARSVFNEMKEKCV-KPGGYSYSIMISSFCRGGLFEEA 185
Query: 270 -ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK--STFPPTNTSYLVL-- 324
ELA + + D + ++ YC +++V R + + P NT ++++
Sbjct: 186 KELAEEFEAKYDKYDVAISNAILCAYCRAGEMESVMRTMRKMDELAISPDYNTFHILIKY 245
Query: 325 -----LQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
L LA D+ ++ + E CSS L +
Sbjct: 246 FCKEKLYMLAYQTMEDMHRKGHQPAEELCSSLLFHLGKI 284
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 162 RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWM 221
+AL L ++++ ++V + L + + E+ + NQMK S + Y +
Sbjct: 9 KALDLVQELNYNGLQMDSVMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIYHYSSLL 68
Query: 222 QSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM 279
+Y+ + E + +M + +K TT +YV+ LFEK+ L +L+ +
Sbjct: 69 NAYASGGNYKKAEELVQDMKSSGLVPNKVMLTTQ---LKVYVRGRLFEKSRDLLVELDTL 125
Query: 280 K-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDIL 337
+D Y L+ T +D V+ +K P SY +++ + + +
Sbjct: 126 GFAKDEMPYCLLMDGLAKTGCIDEARSVFNEMKEKCVKPGGYSYSIMISSFCRGGLFEEA 185
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAY 363
K+ EE+E++ YD+ +++ I+ AY
Sbjct: 186 KELAEEFEAKYDKYDVAISNAILCAY 211
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 137/339 (40%), Gaps = 19/339 (5%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
VT LN + G + + L K G+ A +++E M + + ++
Sbjct: 235 VTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMN 294
Query: 120 LTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+ A K F L++ N ++Y L+N YCK+ + A LFE+M
Sbjct: 295 GLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKP 354
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY---SHLND-IDGV 233
+TV +N L + G+ + L +M+ L TY V + HL + ID
Sbjct: 355 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAID-- 412
Query: 234 ERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHF 289
++ + E K +S L +A K E A K+ +E+ D AY+
Sbjct: 413 ---LFQSIKKTEHKPNIEVFSILLDGMCRA---GKLEEAWKQFDEISKNGLEPDTIAYNI 466
Query: 290 LISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRC 348
LI+ CN L +AV +W + + P + ++ V++Q L K N I Q EE +R
Sbjct: 467 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 526
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASA 387
S D + +++ + A + NA ++ S
Sbjct: 527 FSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGVGSV 565
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 129/326 (39%), Gaps = 14/326 (4%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G T AL+ + M G + D++ Y + L +FGR + ALE + ME R + +
Sbjct: 160 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 219
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
+ ++ + N + + ++ + +T+ L++ CKE A + E M
Sbjct: 220 NSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHH 279
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ + +N L +GQ E L + R I L+ +Y + + Y ID
Sbjct: 280 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 339
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR----KAYH 288
R+F EM + K TY+ L ++ + A K EM+ + Y
Sbjct: 340 AFRLFEEMRPKGL-KPSTVTYNTLIGALCQS---GRVRTAQKLFVEMQTCGQFLKLSTYC 395
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
L+ C +L +A++ I K+ P + +LL + + ++ + F+E
Sbjct: 396 VLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 455
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAA 373
D +++I K M EA
Sbjct: 456 GLEPDTIAYNILINGLCNKGMLSEAV 481
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 134/329 (40%), Gaps = 47/329 (14%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK-NRYTYGALLNC 153
A+++ + M + + + + ++ K A K + K + +TYG +++
Sbjct: 96 AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDS 155
Query: 154 YCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
CK+ MT AL +F +M L + V +++L R G+ ++ +M+ R IS D
Sbjct: 156 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 215
Query: 214 NLTY---------------IVWM-----------QSYSHLNDIDGV--------ERVFYE 239
TY + W +++ IDG+ + E
Sbjct: 216 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 275
Query: 240 MCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYC 295
+ + + TY+ L + L + E A K E + R K +Y+ LI+ YC
Sbjct: 276 LMHHKGKEPDILTYNTLMNGLC---LVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 332
Query: 296 NTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+D R++ ++ P+ +Y L+ AL + + ++ F E ++ C + ++
Sbjct: 333 KDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT-CGQF-LK 390
Query: 355 LAD--VIIRAYLQKDMYEEAALIFNNAKK 381
L+ V++ + EEA +F + KK
Sbjct: 391 LSTYCVLLDGLCKNGHLEEAIDLFQSIKK 419
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 19/313 (6%)
Query: 55 ATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRH-ALEVIEWMESRKMHFSYTD 113
A G ++ ALN + GK + L C R L K + + + + + R +
Sbjct: 159 ADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDE 218
Query: 114 FAVYLDLTA--KTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEK 169
F V + A + +A A ++ + N Y A+++CYC TE A + E
Sbjct: 219 FTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES 278
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR-NISLDNLTYIVWMQSYSHLN 228
+ N V + L Y + G+ E+ +V +MK+ +I +D + Y + + Y
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG 338
Query: 229 DIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKA 286
+D RV EM + Y+ + + K E+ + L+++E+ M+P D+ +
Sbjct: 339 RMDDATRVRNEM-RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRP-DKYS 396
Query: 287 YHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAID--------IL 337
Y+ LI YC ++ A ++++ T +Y LL+ L+AID +L
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456
Query: 338 KQCFEEWESRCSS 350
K+ E CS+
Sbjct: 457 KRGVAPNEISCST 469
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 12/266 (4%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AK 142
L K G+ AL + + +R + + F ++ K +A AE+ + + E
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ TY L + YCK A L KM+ L F + FN+ T + Q KV +
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++M R +S + +TY + + ++ +++EM N + + S L S + K
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFIC-SALMSCFYK 651
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSY 321
++A L L+KL + + +T +D ++ V + P + N +
Sbjct: 652 EGKVDEANLVLQKLVNID--------MIPGCSISTIEIDKISHVVDTIADGNPHSANVMW 703
Query: 322 LVLLQALAKLNAIDILKQCFEEWESR 347
V++ L K I K FE ++
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNK 729
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 108/285 (37%), Gaps = 43/285 (15%)
Query: 130 AEKYFNGLSEYAKNRYTYGA-----LLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
AE F L+E ++ +T+ A LL + AL +F+ M ++ + + N
Sbjct: 130 AEPLFPHLAEVYRD-FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNR 188
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSH----------LNDIDG-- 232
L ++ G P + QM+ + D T + ++Y + +++G
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248
Query: 233 --VERVFYEMCNECEDKCRWT--------------------TYSNLASIYVKAELFEKAE 270
V V Y +C WT TY+ L Y K E+AE
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308
Query: 271 LALKKLEEMKP--RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-SYLVLLQA 327
+K+++E D AY +I+ YC +D RV ++ N Y ++
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
L KL ++ +++ +E E D + +I Y ++ +A
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 5/155 (3%)
Query: 72 KTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
K V DM+ C S + + H V++ + H + + V + K+ IA A+
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISH---VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720
Query: 132 KYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
F L + + +TY +L++ + A +L + M N + +N+L
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ G+ + L N+++ + IS + +TY + Y
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/204 (17%), Positives = 78/204 (38%), Gaps = 1/204 (0%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N + Y ++N CK E + ++M+++ + ++N L Y R G K +
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M + ++ LTY ++ + L+ ID R+++ M + + L ++
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSY 321
+ + L + L ++ ++ +I+ C + + +K PP + +Y
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537
Query: 322 LVLLQALAKLNAIDILKQCFEEWE 345
L KL + + E
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKME 561
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 16/114 (14%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP------- 195
N TY +L+ CK RA+ LF K+ N + +N L Y + G+
Sbjct: 769 NIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLK 828
Query: 196 ---------EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
E+ L++QM + N+ + +TY + Y +++ + +++ EM
Sbjct: 829 QKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 882
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 132/286 (46%), Gaps = 7/286 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ S K G + AL ++ ME ++ ++ ++L+ + + A F+ L S
Sbjct: 65 ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 124
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y +++N Y K + A L ++M+E L NTV+++ L ++Y+ + +
Sbjct: 125 TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 184
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ +MK+ N +LD T + + Y L+ + +R+F+ + + + + +Y+ + +Y
Sbjct: 185 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL-RKMDIEPNVVSYNTILRVY 243
Query: 261 VKAELFEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
+AELF +A + L +L + K ++ Y+ +I +Y T + A N V + P
Sbjct: 244 GEAELFGEA-IHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 302
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
+Y ++ K +D F++ S D L +I AY
Sbjct: 303 AITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 348
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 6/241 (2%)
Query: 92 YRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYG 148
++ +L +++W+ E K S + V L + A F+ + + A +RYTY
Sbjct: 3 WQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYS 62
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
L+ + KE M + AL+ +KM++ + G+ V ++NL + RL K + +++K+
Sbjct: 63 TLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRS 122
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
I+ D + Y + Y + EM NE +YS L S+YV+ F +
Sbjct: 123 GITPDLVAYNSMINVYGKAKLFREARLLIKEM-NEAGVLPNTVSYSTLLSVYVENHKFLE 181
Query: 269 AELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKSTFPPTNTSYLVLLQ 326
A +++E+ D + +I +Y + +R+ W + K P SY +L+
Sbjct: 182 ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 241
Query: 327 A 327
Sbjct: 242 V 242
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 19/313 (6%)
Query: 55 ATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRH-ALEVIEWMESRKMHFSYTD 113
A G ++ ALN + GK + L C R L K + + + + + R +
Sbjct: 159 ADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDE 218
Query: 114 FAVYLDLTA--KTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEK 169
F V + A + +A A ++ + N Y A+++CYC TE A + E
Sbjct: 219 FTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES 278
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR-NISLDNLTYIVWMQSYSHLN 228
+ N V + L Y + G+ E+ +V +MK+ +I +D + Y + + Y
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG 338
Query: 229 DIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKA 286
+D RV EM + Y+ + + K E+ + L+++E+ M+P D+ +
Sbjct: 339 RMDDATRVRNEM-RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRP-DKYS 396
Query: 287 YHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAID--------IL 337
Y+ LI YC ++ A ++++ T +Y LL+ L+AID +L
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456
Query: 338 KQCFEEWESRCSS 350
K+ E CS+
Sbjct: 457 KRGVAPNEISCST 469
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 12/266 (4%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AK 142
L K G+ AL + + +R + + F ++ K +A AE+ + + E
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ TY L + YCK A L KM+ L F + FN+ T + Q KV +
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++M R +S + +TY + + ++ +++EM N + + S L S + K
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFIC-SALMSCFYK 651
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSY 321
++A L L+KL + + +T +D ++ V + P + N +
Sbjct: 652 EGKVDEANLVLQKLVNID--------MIPGCSISTIEIDKISHVVDTIADGNPHSANVMW 703
Query: 322 LVLLQALAKLNAIDILKQCFEEWESR 347
V++ L K I K FE ++
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNK 729
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 123 KTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
K+ ++ A FN L + N TY L++ YCKE T A L +KM E +
Sbjct: 782 KSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVI 841
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
++ L G E+ L++QM + N+ + +TY + Y +++ + +++ EM
Sbjct: 842 TYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 901
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 108/285 (37%), Gaps = 43/285 (15%)
Query: 130 AEKYFNGLSEYAKNRYTYGA-----LLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
AE F L+E ++ +T+ A LL + AL +F+ M ++ + + N
Sbjct: 130 AEPLFPHLAEVYRD-FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNR 188
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSH----------LNDIDG-- 232
L ++ G P + QM+ + D T + ++Y + +++G
Sbjct: 189 LLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248
Query: 233 --VERVFYEMCNECEDKCRWT--------------------TYSNLASIYVKAELFEKAE 270
V V Y +C WT TY+ L Y K E+AE
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAE 308
Query: 271 LALKKLEEMKP--RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-SYLVLLQA 327
+K+++E D AY +I+ YC +D RV ++ N Y ++
Sbjct: 309 RVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMING 368
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
L KL ++ +++ +E E D + +I Y ++ +A
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 5/155 (3%)
Query: 72 KTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
K V DM+ C S + + H V++ + H + + V + K+ IA A+
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISH---VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720
Query: 132 KYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
F L + + +TY +L++ + A +L + M N + +N+L
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ G+ + L N+++ + IS + +TY + Y
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/204 (17%), Positives = 78/204 (38%), Gaps = 1/204 (0%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N + Y ++N CK E + ++M+++ + ++N L Y R G K +
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M + ++ LTY ++ + L+ ID R+++ M + + L ++
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSY 321
+ + L + L ++ ++ +I+ C + + +K PP + +Y
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537
Query: 322 LVLLQALAKLNAIDILKQCFEEWE 345
L KL + + E
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKME 561
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 148/357 (41%), Gaps = 36/357 (10%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G + AL+ + M G+ R D++ Y + L K G A+ ++ M + + +
Sbjct: 145 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 204
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSE-----YAKNRYTYGALLNCYCKELMTERALALFEK 169
+D K + A FN SE + + +TY +L++ C + L +
Sbjct: 205 NTIIDSLCKDRQVTEA---FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 261
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M + K + + V+FN + + G+ + +V++M QR + + +TY M + L++
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321
Query: 230 IDGVERVFYEM-CNECEDKCRWTTYSNLASIYVKAELFEKA----------------ELA 272
+D +VF M C C +Y+ L + Y K + +KA + A
Sbjct: 322 MDEAVKVFDTMVCKGCMPN--VISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEA 379
Query: 273 LKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQA 327
+K + M + + +Y+ LI+ YC +D ++G + + P +Y L+
Sbjct: 380 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 439
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRAN 384
L + + F E + CS + I+ YL K+ Y A+ A + +N
Sbjct: 440 LCHVERLQDAIALFHEMVA-CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 495
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLN 152
A+ +++ +E + + +D + + AA F+ LS + +TY ++N
Sbjct: 484 AMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMIN 543
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
C+ + + A LF +MDE N +N ++ +LR + + L+ +M R S
Sbjct: 544 GLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSA 603
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW-TTYSNLAS----IYVKAELFE 267
D T ++++ S DG+++ ++ + C+W +T+ + +S I K E
Sbjct: 604 DASTMTLFVKMLSD----DGLDQSLKQI---LRNGCKWISTFDSSSSTGLHILQKGISHE 656
Query: 268 KAELALKKLEEM 279
+ E L + EE+
Sbjct: 657 RNESDLVQAEEL 668
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 5/220 (2%)
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
+ A++ F +M ++ +TV FN L T ++ + L +QM I + T +
Sbjct: 43 DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102
Query: 221 MQSYSHLNDIDGVERVFYEM--CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
+ S+ HLN + V ++ D +TT + I V+ ++ E L K + E
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTL--IRGICVEGKIGEALHLFDKMIGE 160
Query: 279 MKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
D Y LI+ C N A R+ G +++ P +Y ++ +L K +
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
F E ++ S D+ + +I A ++ A + N
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 260
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 122/296 (41%), Gaps = 4/296 (1%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA-EKYFNGLSEYA--KNRYTY 147
+ + A+E+ + M + ++ + KT + A E F+ + E N Y
Sbjct: 93 KMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAY 152
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
AL+N CK+ ERA L E+M ++ + + +N + + R+G+ + + + M
Sbjct: 153 NALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPS 212
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
R S D + Y + + D ++F ++ + T S L + K+ + E
Sbjct: 213 RGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 272
Query: 268 KAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQ 326
E+ K + + Y ++S +C +D ++V + K P +Y +LL
Sbjct: 273 AEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 332
Query: 327 ALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
L K N +D + F + D+ V++ + + +A ++F+ +R
Sbjct: 333 GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 158/406 (38%), Gaps = 54/406 (13%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
++S K G+ R ++ E M + ++ + +D AK + A + + +
Sbjct: 15 LKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGL 74
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ-PEKVR 199
+ YTY +LLN +CKE + A+ LF+ M E F + V ++ + + + G+ E +
Sbjct: 75 EPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALE 134
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L ++M +R S + + Y I+G+ C+D
Sbjct: 135 MLFHKMIERGCSANTVAYNAL---------INGL----------CKD------------- 162
Query: 260 YVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TF 314
E E A K LEEM + D Y+ ++S C + + + + S +
Sbjct: 163 -------ENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGY 215
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P +Y LL AL K D + F++ ++ D + I+ +K +EA
Sbjct: 216 SPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE 275
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+F K A+ A + + + R++++D A L E + P VT +
Sbjct: 276 MFK--KMVASGCAPNGATYSIVLSGHCRAKKVDDA----HKVLEEMSKIGAVPDVVTYNI 329
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKL 479
+ VD A E + C D +YS+++ K+
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 375
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 4/245 (1%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+ E + NRYT+ +L +CK+ LFE+M + + + +N L Y + G+ +
Sbjct: 1 MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
+ L +M + TY + ++ + +F M + + TYS +
Sbjct: 61 EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEP-DVVTYSTI 119
Query: 257 ASIYVK-AELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-T 313
S K ++ E E+ K +E + AY+ LI+ C N++ ++ + S
Sbjct: 120 ISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 179
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
+ P N +Y +L L ++ + KQ F+ SR S D+ + ++ A ++ +EA
Sbjct: 180 YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM 239
Query: 374 LIFNN 378
+F +
Sbjct: 240 KLFKD 244
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 16/184 (8%)
Query: 42 NEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW 101
N D+ + + A+G + GA + ++ G K + A +V+E
Sbjct: 269 NMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK--------------KVDDAHKVLEE 314
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELM 159
M + + LD KTN + A + F+ + + A + +Y +LN CK
Sbjct: 315 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
A LF++M E K + + V FN L + G+ ++ + L++QM + D + Y
Sbjct: 375 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNT 434
Query: 220 WMQS 223
M
Sbjct: 435 LMNG 438
>gi|224144700|ref|XP_002325381.1| predicted protein [Populus trichocarpa]
gi|222862256|gb|EEE99762.1| predicted protein [Populus trichocarpa]
Length = 1071
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 38/344 (11%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y L+ K AL L+E M + + + +L TMY ++ K L QM+
Sbjct: 330 YSLLITVSTKNSNWHEALKLYEDMRSHRIVPSKFTCASLLTMYYKIKDYSKALSLFIQMQ 389
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE------MCNECEDKCRWTTYSNLASIY 260
+NI+ D + Y + ++ Y L + ++ F E + NE TY +A ++
Sbjct: 390 SKNIAADEVIYGLLIRIYGKLGLYEDAQKTFEETERSGLLSNE-------KTYLAMAQVH 442
Query: 261 VKAELFEKAELALKKLEEMKPRD----RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP 316
+ + FEK AL +E MK R+ R AY L+ YC +LD+ + L P
Sbjct: 443 LSSGNFEK---ALSVIEVMKSRNIWLSRFAYIVLLQCYCMKEDLDSAEVTFQALSKIGCP 499
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA-ALI 375
S ++ +L + K +D L + +I+ + ++ M ++A L+
Sbjct: 500 DAGSCSDMINLYVRLGFTEKAKDFIVHIRKYLVDFDEELFNTVIKVFCKEGMLKDAEQLV 559
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTF 435
+ + RFFK+ + M Y +++L+ N M +A + A +
Sbjct: 560 YEMGTNASFKDNRFFKTFSNVM--YGENKELE---NIMVSADTTA-----------LGLI 603
Query: 436 FRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
+ E + EEF K++ S S L+ ++I G L
Sbjct: 604 LSLYLENGNFTKTEEFLKLILEAGS-GLSVVSQLVNSFIREGDL 646
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 8/225 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRY 145
K + AL++ E M S ++ S A L + K + A F + A +
Sbjct: 339 KNSNWHEALKLYEDMRSHRIVPSKFTCASLLTMYYKIKDYSKALSLFIQMQSKNIAADEV 398
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
YG L+ Y K + E A FE+ + L N + ++ ++L G EK ++ M
Sbjct: 399 IYGLLIRIYGKLGLYEDAQKTFEETERSGLLSNEKTYLAMAQVHLSSGNFEKALSVIEVM 458
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-ECEDKCRWTTYSNLASIYVKAE 264
K RNI L YIV +Q Y D+D E F + C D + S++ ++YV+
Sbjct: 459 KSRNIWLSRFAYIVLLQCYCMKEDLDSAEVTFQALSKIGCPDA---GSCSDMINLYVRLG 515
Query: 265 LFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNL-DAVNRVW 307
EKA+ + + + + D + ++ +I ++C L DA V+
Sbjct: 516 FTEKAKDFIVHIRKYLVDFDEELFNTVIKVFCKEGMLKDAEQLVY 560
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 135/346 (39%), Gaps = 21/346 (6%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + Y LL Y + + A F +M E+ + VA + Y R G + +
Sbjct: 183 YHPSVIVYTILLRIYGQVGKIKLAEQTFLEMLEVGCEPDEVACGTMLCSYARWGHHKAMF 242
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+ +K+R I + Y +M S + G V + + TY+ + S
Sbjct: 243 SFYSAIKERGIVVSIAVY-NFMLSSLQKKSLHGKVIVLWRQMVDKRVAPNNFTYTVVISS 301
Query: 260 YVKAELFEKAELALKKLEEMKP----RDRKAYHFLISLYCNTSNLDAVNRVWGILKST-F 314
VK L ++ A K EM+ + Y LI++ SN +++ ++S
Sbjct: 302 LVKEGLHKE---AFKTFNEMRTMGLVPEEVIYSLLITVSTKNSNWHEALKLYEDMRSHRI 358
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P+ + LL K+ F + +S+ + D + ++IR Y + +YE+A
Sbjct: 359 VPSKFTCASLLTMYYKIKDYSKALSLFIQMQSKNIAADEVIYGLLIRIYGKLGLYEDAQK 418
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
F ++ S E YL Q+ L+ E ALS + R + ++
Sbjct: 419 TFEETERSG------LLSNEK---TYLAMAQVHLSSGNFEKALSVIEVMKSRNIWLSRFA 469
Query: 435 FFRFFE---EEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAG 477
+ + ++D+D AE + L + C D + S +I Y+ G
Sbjct: 470 YIVLLQCYCMKEDLDSAEVTFQALSKIGCPDAGSCSDMINLYVRLG 515
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 6/264 (2%)
Query: 77 DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG 136
DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 81 DMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNK 140
Query: 137 -LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
LSE R+T+ ++ + E A FE M + + + +N + Y R+ +
Sbjct: 141 MLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKK 200
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
E+ +MK +NI + +TY ++ Y ++ +D R+ EM K TYS
Sbjct: 201 MEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKG-YGIKPNAITYS 259
Query: 255 NLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILK 311
L AE +A LK++ + + P D + LIS C NLDA V +++
Sbjct: 260 TLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIR 319
Query: 312 STFPPTNTSYLVLLQALAKLNAID 335
+ P Y VL++ K D
Sbjct: 320 LSVPTEAGHYGVLIENYCKAGQYD 343
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R T+ L+ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K Y
Sbjct: 200 KXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAIXY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LI+ C + NLDA + V ++
Sbjct: 259 STLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKAGQYD 343
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 133/335 (39%), Gaps = 52/335 (15%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
V L K G+ + A E I +ME + + + + I A + + +
Sbjct: 256 VNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 315
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK--- 197
+ YTYG+L++ CKE E A LF+KM E+ + N V +N L Y G E+
Sbjct: 316 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 375
Query: 198 ---------VRP-----------------------LVNQMKQRNISLDNLTYIVWMQSYS 225
+ P ++ +M+++ I D +TY + + YS
Sbjct: 376 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 435
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS-IYV---KAELFEKAELALKKLEEMKP 281
G + +++ NE K T+ S IYV + + E +L K L++
Sbjct: 436 RC----GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 491
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILK----STFPPTNTSYLVLLQALAKLNAIDIL 337
D ++ ++ +C N V R + +LK + PP ++ L+Q + ++
Sbjct: 492 PDVIMFNAMVDGHCANGN---VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 548
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ +E + R D + +I Y ++ ++A
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDA 583
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K + D + Y + + G + A ++ M S+ + ++ + + + ++ N
Sbjct: 415 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A+ F + + + + + A+++ +C ERA L ++MD + V FN
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
L R G+ E+ R L+++MK+R I D+++Y + Y DI RV EM
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 590
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 65/341 (19%), Positives = 126/341 (36%), Gaps = 44/341 (12%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YT+ ++N CKE ++A M+ L F N V++N + Y G E R +++
Sbjct: 250 YTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDA 309
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M+ + I D+ TY + ++ +F +M E TY+ L Y
Sbjct: 310 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV-EIGLVPNAVTYNTLIDGYCNKG 368
Query: 265 LFEKA-----ELALKK---------------------------LEEMKPR----DRKAYH 288
E+A E+ K ++EM+ + D Y+
Sbjct: 369 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 428
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI+ Y N A + +L PT+ +Y L+ L++ N + FE+ +
Sbjct: 429 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 488
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLD 407
S D+ + + ++ + E A ++ +++ E ++ R +
Sbjct: 489 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS------VPPDEVTFNTLMQGRCRE 542
Query: 408 LALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA 448
+ E L E K+ +P ++ +T + D+ A
Sbjct: 543 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDA 583
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T +L+ + K E A L+ +M L+ FN + + + G+ +K R + M
Sbjct: 216 TCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM 275
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + ++Y + YS +I+G R+ M + + +T Y +L S K
Sbjct: 276 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT-YGSLISGMCKEGR 334
Query: 266 FEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLV 323
E+A K+ E+ + Y+ LI YCN +L+ A + ++K P+ ++Y +
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 394
Query: 324 LLQAL 328
L+ AL
Sbjct: 395 LVHAL 399
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 131/328 (39%), Gaps = 52/328 (15%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTY 147
G+ + A E I +ME + + + + I A + + + + YTY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK---------- 197
G+L++ CKE E A LF+KM E+ + N V +N L Y G E+
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306
Query: 198 --VRP-----------------------LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ P ++ +M+++ I D +TY + + YS +
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN--- 363
Query: 233 VERVFYEMCNECEDKCRWTTYSNLAS-IYV---KAELFEKAELALKKLEEMKPRDRKAYH 288
+R F ++ NE K T+ S IYV + + E +L K L++ D ++
Sbjct: 364 AKRAF-DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 422
Query: 289 FLISLYCNTSNLDAVNRVWGILKS----TFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
+I +C N V R + +LK + PP ++ L+Q + ++ + +E
Sbjct: 423 AMIDGHCANGN---VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 479
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ R D + +I Y ++ ++A
Sbjct: 480 KXRGIKPDHISYNTLISGYGRRGDIKDA 507
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 8/238 (3%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K + D + Y + + G + A ++ M S+ + ++ + + + ++ N
Sbjct: 339 MRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 398
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A+ F + + + + + A+++ +C ERA L ++MD + V FN
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 458
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L R G+ E+ R L+++MK R I D+++Y + Y DI V EM +
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNL 300
+ TY+ L K + + AE LK++ + + P D Y LI N L
Sbjct: 519 FNPT-LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISP-DDSTYLSLIEGMGNVDTL 574
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
K++M R E DEL + ++ + L G+ +K R + M+ + +
Sbjct: 150 KQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVV 209
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
+Y + YS +I+G R+ M + + +T Y +L S K E+A K
Sbjct: 210 SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT-YGSLISGMCKEGRLEEASGLFDK 268
Query: 276 LEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQAL 328
+ E+ + Y+ LI YCN +L+ A + ++K P+ ++Y +L+ AL
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 323
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 146/386 (37%), Gaps = 16/386 (4%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL---SEYAKNRYTYGA 149
+ A V+E M R + + +D K A + F L S Y N +TY
Sbjct: 268 KQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV 327
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
++ YC+E RA L +M E NT + L + + G ++ L+N+MKQ
Sbjct: 328 MIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEG 387
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ TY + + I +V M K TY+ L + + K A
Sbjct: 388 FLPNIYTYNAVIDGFCKKGKIQEAYKVL-RMATSQGLKFDKITYTILITEHCKQGHITYA 446
Query: 270 -ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQA 327
+L + +E D +AY LIS YC ++ + + L PT +Y ++
Sbjct: 447 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 506
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASA 387
K+ + + FE D +I ++ EEA ++ +
Sbjct: 507 YCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPC 566
Query: 388 RFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDG 447
+R + Y R + +A++ ++ L + +Q H TVD R DVD
Sbjct: 567 EV--TRVTLTFEYCRREKTSIAVSVLD-RLDKRQQVH------TVDVVVRKLSALGDVDA 617
Query: 448 AEEFC-KVLKSLNCLDFSAYSLLIKT 472
A F KVL +D + Y+ I +
Sbjct: 618 ASLFLKKVLDEDYAVDHATYTGFINS 643
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Cucumis sativus]
Length = 1062
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 137/312 (43%), Gaps = 14/312 (4%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA--VYLDLTAKTNGIAAAEKYFN 135
+ + + SL+K G + E+ WM+ ++ +++DF V ++ K A K FN
Sbjct: 261 VFNFMLSSLQKKGLHAKVKEL--WMQMVEIGVTFSDFTYTVVINSLVKEGHSEEAFKVFN 318
Query: 136 GLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ + TY L++ K ++ L L++ M + + + ++L T++ + G
Sbjct: 319 EMKNCGFIPEEVTYNLLISLSIKRENSDEVLRLYKDMRDKDIVPSNYTCSSLLTLFYKNG 378
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
K L ++M+ + + +D + Y + ++ Y L + + F EM + +Y
Sbjct: 379 DYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEM-EQLGLLTDEKSY 437
Query: 254 SNLASIYVKAELFEKAELALKKLEEMKPRD----RKAYHFLISLYCNTSNLDAVNRVWGI 309
+A +++ + FEKA L +E MK R+ R AY + Y ++ + +
Sbjct: 438 LAMAQVHLNSRNFEKA---LDIIELMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQA 494
Query: 310 LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMY 369
L T P S + +L KL+ ++ K +D L +++R Y ++ +
Sbjct: 495 LSKTGLPDARSCIYILNLYLKLDLVNKAKDFIAHIRKDGVVFDEELYKLVLRVYCKEGLS 554
Query: 370 EEAALIFNNAKK 381
E+A ++ KK
Sbjct: 555 EDAEILIELMKK 566
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 11/236 (4%)
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
++E M L + + +N + ++Y R + +K + N + +S D Y + Y
Sbjct: 795 IYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNLISCYG 854
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRD 283
+F EM E K +Y+ + ++Y A L E+ E LK +E+ + P D
Sbjct: 855 KAGKTHEASLLFKEMLEEGV-KPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVP-D 912
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFE 342
Y LI Y + ++ ++ P T Y +LL ALAK I ++ ++
Sbjct: 913 SFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTTCAHYDLLLSALAKAGMIRKAERVYD 972
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA------NASARFFKS 392
E ++ S D+ ++R YL E F + K A +A+ F+K+
Sbjct: 973 ELQTAGLSPDVTCNRTLMRGYLDYGYVREGIKFFESTCKYAGDRFIMSAAVHFYKA 1028
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
++++ + G+ A + E M + + S + + + + + A + FN S
Sbjct: 780 IKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGL 839
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ + Y L++CY K T A LF++M E V++N + +Y G E+
Sbjct: 840 SPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEN 899
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT---YSNLA 257
L+ M+Q I D+ TY +++Y+ E++ N ++K TT Y L
Sbjct: 900 LLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAEKII----NSMQEKGIPTTCAHYDLLL 955
Query: 258 SIYVKAELFEKAELALKKLE 277
S KA + KAE +L+
Sbjct: 956 SALAKAGMIRKAERVYDELQ 975
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 130/342 (38%), Gaps = 48/342 (14%)
Query: 80 EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTD----FAVYLDLTAKTNGIAAAEKYFN 135
E C+ L++ +R +V +WM K+ SY + + L + I AE+ F
Sbjct: 158 EMCI-VLKEQKGWRQVRDVFDWM---KLQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFL 213
Query: 136 GLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ E + G +L Y + + L+ + + + + FN + + + G
Sbjct: 214 EMLEVGLEPDEVACGTMLCTYARWGHHKTMLSFYSAVKDRGIVPPIAVFNFMLSSLQKKG 273
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
KV+ L QM + ++ + TY V + S + +VF EM N C +
Sbjct: 274 LHAKVKELWMQMVEIGVTFSDFTYTVVINSLVKEGHSEEAFKVFNEMKN-----CGFIP- 327
Query: 254 SNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
EE+ Y+ LISL N D V R++ ++
Sbjct: 328 -----------------------EEV------TYNLLISLSIKRENSDEVLRLYKDMRDK 358
Query: 314 -FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P+N + LL K F E ES+ D + ++IR Y + +YE+A
Sbjct: 359 DIVPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDA 418
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEME 414
F ++ + KS + +L SR + AL+ +E
Sbjct: 419 HKTFEEMEQLGLLTDE--KSYLAMAQVHLNSRNFEKALDIIE 458
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 153/401 (38%), Gaps = 18/401 (4%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL---SEYAKNRYTYGA 149
+ A V+E M R + + +D K A + F L S Y N +TY
Sbjct: 160 KQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV 219
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
++ YC+E RA L +M E NT + L + + G ++ L+N+MKQ
Sbjct: 220 MIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEG 279
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ TY + + I +V M K TY+ L + + K A
Sbjct: 280 FLPNIYTYNAVIDGFCKKGKIQEAYKVL-RMATSQGLKFDKITYTILITEHCKQGHITYA 338
Query: 270 -ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQA 327
+L + +E D +AY LIS YC ++ + + L PT +Y ++
Sbjct: 339 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 398
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASA 387
K+ + + FE D +I ++ EEA ++ +
Sbjct: 399 YCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPC 458
Query: 388 RFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDG 447
+R + Y R + +A++ ++ L + +Q H TVD R DVD
Sbjct: 459 EV--TRVTLTFEYCRREKTSIAVSVLD-RLDKRQQVH------TVDVVVRKLSALGDVDA 509
Query: 448 AEEFC-KVLKSLNCLDFSAYSLLIKTYIAAGK--LASDMRQ 485
A F KVL +D + Y+ I + + LAS+M +
Sbjct: 510 ASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSE 550
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 7/213 (3%)
Query: 123 KTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
K + A K F+ + A + +Y LL+ YCK +LA+F +M + + + V
Sbjct: 93 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 152
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
F +L + G E+ LV QM++R + ++ +T+ + + +D EM
Sbjct: 153 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 212
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTS 298
+C + Y+ L + Y K + A ++++E +KP D Y +IS YC
Sbjct: 213 -RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTIISGYCKVG 270
Query: 299 NLDAVNRV-WGILKSTFPPTNTSYLVLLQALAK 330
NLD+ ++ +LK P +Y L++ L +
Sbjct: 271 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 303
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 3/246 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G +L V M R + F + T K + A + E N
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ AL++ +CK+ + AL E+M + + V +N L Y +LG+ + R L+ +M
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + + D +TY + Y + ++D ++ +M + T S + + + L
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVL 324
+ EL L+ D Y LI +C N++ A++ +++ P +Y VL
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367
Query: 325 LQALAK 330
+ L+K
Sbjct: 368 INGLSK 373
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 24/262 (9%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K GR A E+I ME++++ ++ + K + +A + + + +
Sbjct: 233 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 292
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+ C+E A LFE M +L + + L + + G EK L ++M
Sbjct: 293 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--------------CEDKCRWT 251
++ + D +TY V + S R+ +++ +E C K +
Sbjct: 353 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 412
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL-DAVNRV 306
+ L + L ++A+ K + M R D Y LI +C N+ A++
Sbjct: 413 SVVALLKGFCMKGLMKEAD---KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 469
Query: 307 WGILKSTFPPTNTSYLVLLQAL 328
+L+S F P +TS + L++ L
Sbjct: 470 KQMLRSGFSPNSTSTISLVRGL 491
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 25/305 (8%)
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
N +N L G+ E+ +V M+ + + +TY + ++ ++DG ERV
Sbjct: 9 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 68
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYC 295
M E K T++++ + KA E A ++ E + P D +Y+ L+S YC
Sbjct: 69 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP-DVVSYNTLLSGYC 127
Query: 296 NTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
L V+ + + P ++ L+ A K ++ + R +R
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER----GLR 183
Query: 355 LADV----IIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA- 409
+ +V +I + +K ++A L +K + + + Y + ++DLA
Sbjct: 184 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS--VVCYNALINGYCKLGRMDLAR 241
Query: 410 --LNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFC-KVLKSLNCLDFSAY 466
+ EMEA +P VT T + + ++D A + K+LK D Y
Sbjct: 242 ELIREMEAK-------RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 294
Query: 467 SLLIK 471
S LI+
Sbjct: 295 SSLIR 299
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 138/302 (45%), Gaps = 21/302 (6%)
Query: 57 GGSVTGALNAYI-MEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
G A++A+ ME + D + + + + + R A E + +S K F D
Sbjct: 191 AGLAAEAVHAFNRMEDYGCKPDKVSFSI-VISSLCKKRRASEAELFFDSLKHKFE-PDVI 248
Query: 116 VYLDLT---AKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKM 170
VY L + IA AE+ F+ + E N YTY +++ C+ RA +F +M
Sbjct: 249 VYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEM 308
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
+ N V FN+L ++++ G+ EKV + NQMK+ + D ++Y ++S+ ++
Sbjct: 309 IDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENL 368
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIY-VKAELFE--KAELALKKLEEMKPRDRK-A 286
D +V M K S SI+ AEL + A K++E+K
Sbjct: 369 DEAVKVLDTMVK----KGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLT 424
Query: 287 YHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKL----NAIDILKQCF 341
Y+ L+ ++ ++ ++D V ++ + +S P +Y +L+ + NA +++K+
Sbjct: 425 YNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMV 484
Query: 342 EE 343
EE
Sbjct: 485 EE 486
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 112/279 (40%), Gaps = 17/279 (6%)
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED---KCRWTTYSNLA 257
L++ MK R + + T+ V ++ Y G+ N ED K ++S +
Sbjct: 165 LIDLMKSRGVRITVSTFSVLVRRYVRA----GLAAEAVHAFNRMEDYGCKPDKVSFSIVI 220
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPP 316
S K +AEL L+ D Y L+ +C ++ V+ +K + P
Sbjct: 221 SSLCKKRRASEAELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKP 280
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y +++ +L + I F E + + ++R +++ E+ ++
Sbjct: 281 NVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVY 340
Query: 377 NNAKKRANASARFFKSRESFMI-YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTF 435
N K+ A+ +F+I + + LD A+ ++ + + P T ++
Sbjct: 341 NQMKRLGCAADTI---SYNFLIESHCKDENLDEAVKVLDTMVKKGVA----PNASTFNSI 393
Query: 436 FRFFEEEKDVDGAEEFCKVLKSLNCLDFS-AYSLLIKTY 473
F E DV+GA +K L C+ + Y++L++ +
Sbjct: 394 FGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMF 432
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 7/213 (3%)
Query: 123 KTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
K + A K F+ + A + +Y LL+ YCK +LA+F +M + + + V
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
F +L + G E+ LV QM++R + ++ +T+ + + +D EM
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTS 298
+C + Y+ L + Y K + A ++++E +KP D Y +IS YC
Sbjct: 355 -RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTIISGYCKVG 412
Query: 299 NLDAVNRV-WGILKSTFPPTNTSYLVLLQALAK 330
NLD+ ++ +LK P +Y L++ L +
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 445
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 3/246 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G +L V M R + F + T K + A + E N
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ AL++ +CK+ + AL E+M + + V +N L Y +LG+ + R L+ +M
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + + D +TY + Y + ++D ++ +M + T S + + + L
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVL 324
+ EL L+ D Y LI +C N++ A++ +++ P +Y VL
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Query: 325 LQALAK 330
+ L+K
Sbjct: 510 INGLSK 515
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 24/262 (9%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K GR A E+I ME++++ ++ + K + +A + + + +
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+ C+E A LFE M +L + + L + + G EK L ++M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--------------CEDKCRWT 251
++ + D +TY V + S R+ +++ +E C K +
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 554
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL-DAVNRV 306
+ L + L ++A+ K + M R D Y LI +C N+ A++
Sbjct: 555 SVVALLKGFCMKGLMKEAD---KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611
Query: 307 WGILKSTFPPTNTSYLVLLQAL 328
+L+S F P +TS + L++ L
Sbjct: 612 KQMLRSGFSPNSTSTISLVRGL 633
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 25/305 (8%)
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
N +N L G+ E+ +V M+ + + +TY + ++ ++DG ERV
Sbjct: 151 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 210
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYC 295
M E K T++++ + KA E A ++ E + P D +Y+ L+S YC
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP-DVVSYNTLLSGYC 269
Query: 296 NTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
L V+ + + P ++ L+ A K ++ + R +R
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER----GLR 325
Query: 355 LADV----IIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA- 409
+ +V +I + +K ++A L +K + + + Y + ++DLA
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS--VVCYNALINGYCKLGRMDLAR 383
Query: 410 --LNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFC-KVLKSLNCLDFSAY 466
+ EMEA +P VT T + + ++D A + K+LK D Y
Sbjct: 384 ELIREMEAK-------RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 436
Query: 467 SLLIK 471
S LI+
Sbjct: 437 SSLIR 441
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 7/225 (3%)
Query: 123 KTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
K + A K F+ + A + +Y LL+ YCK +LA+F +M + + + V
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
F +L + G E+ LV QM++R + ++ +T+ + + +D EM
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTS 298
+C + Y+ L + Y K + A ++++E +KP D Y +IS YC
Sbjct: 355 -RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTIISGYCKVG 412
Query: 299 NLDAVNRV-WGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
NLD+ ++ +LK P +Y L++ L + ++ + FE
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 3/246 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G +L V M R + F + T K + A + E N
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ AL++ +CK+ + AL E+M + + V +N L Y +LG+ + R L+ +M
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + + D +TY + Y + ++D ++ +M + T S + + + L
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVL 324
+ EL L+ D Y LI +C N++ A++ +++ P +Y VL
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Query: 325 LQALAK 330
+ L+K
Sbjct: 510 INGLSK 515
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 24/262 (9%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K GR A E+I ME++++ ++ + K + +A + + + +
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+ C+E A LFE M +L + + L + + G EK L ++M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--------------CEDKCRWT 251
++ + D +TY V + S R+ +++ +E C K +
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 554
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL-DAVNRV 306
+ L + L ++A+ K + M R D Y LI +C N+ A++
Sbjct: 555 SVVALLKGFCMKGLMKEAD---KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611
Query: 307 WGILKSTFPPTNTSYLVLLQAL 328
+L+S F P +TS + L++ L
Sbjct: 612 KQMLRSGFSPNSTSTISLVRGL 633
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 25/305 (8%)
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
N +N L G+ E+ +V M+ + + +TY + ++ ++DG ERV
Sbjct: 151 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 210
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYC 295
M E K T++++ + KA E A ++ E + P D +Y+ L+S YC
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP-DVVSYNTLLSGYC 269
Query: 296 NTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
L V+ + + P ++ L+ A K ++ + R +R
Sbjct: 270 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER----GLR 325
Query: 355 LADV----IIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA- 409
+ +V +I + +K ++A L +K + + + Y + ++DLA
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS--VVCYNALINGYCKLGRMDLAR 383
Query: 410 --LNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFC-KVLKSLNCLDFSAY 466
+ EMEA +P VT T + + ++D A + K+LK D Y
Sbjct: 384 ELIREMEAK-------RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 436
Query: 467 SLLIK 471
S LI+
Sbjct: 437 SSLIR 441
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L A +A LK++ + + P D + LIS CN+ NLDA V ++
Sbjct: 259 STLLPGLCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKAGQYD 343
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 160/434 (36%), Gaps = 52/434 (11%)
Query: 84 RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YA 141
R+ K GR + ALE+ + S + + + N A ++ ++E A
Sbjct: 203 RAFCKTGRLKDALEIFRNIPSPDA----IAYNAIIHGHCRKNDCDGALEFLKEMNERKVA 258
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+ +TY L++ CK T++A + +M + +TV FN++ + G+ E+ L
Sbjct: 259 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 318
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF------------------------ 237
+ M +RN TY + ++D + +
Sbjct: 319 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCK 378
Query: 238 -------YEMCNECEDK-C--RWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKA 286
+E+ E K C TY+ L KA EKA EL + D
Sbjct: 379 RGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVT 438
Query: 287 YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
Y ++ C LD A+ V G+LK P+ +Y L++ L + +D F+E
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQ 405
S+ + D ++ Y + +EA + + + + + M Y + +
Sbjct: 499 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR-----GTPYIDVYNALMDGYCKEGR 553
Query: 406 LDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFS 464
LD N E + + + +D + VD A F + + S C+ D
Sbjct: 554 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK----HGKVDEAFPFLESMHSAGCVPDVV 609
Query: 465 AYSLLIKTYIAAGK 478
+Y+++I A K
Sbjct: 610 SYNIIIDGLFKASK 623
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 4/236 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY L++ CK TE+A L E + F+ + V + + + G+ +K +V
Sbjct: 400 NLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 459
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M +R + +TY M+ +D +F EM ++ + Y +L + Y K
Sbjct: 460 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK-DCTADALAYVSLVNGYCK 518
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSY 321
+ ++A+ + + D Y+ L+ YC LD + V+ + P +Y
Sbjct: 519 SSRTKEAQKVVDGIRGTPYID--VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTY 576
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+++ L K +D E S D+ ++II + +EA + +
Sbjct: 577 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 632
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 8/254 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
V L K GR AL+++E M R S + ++ +T + A F + +
Sbjct: 443 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y +L+N YCK T+ A + + + ++ +N L Y + G+ +++
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYID---VYNALMDGYCKEGRLDEIPN 559
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ M R + TY + M +D F E + +Y+ +
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA-FPFLESMHSAGCVPDVVSYNIIIDGL 618
Query: 261 VKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTN 318
KA ++A L ++ + P D Y+ L++ +C D AV + ++K+ P N
Sbjct: 619 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDN 678
Query: 319 TSYLVLLQALAKLN 332
+Y L+ L++ N
Sbjct: 679 VTYNTLISGLSQTN 692
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 56/315 (17%), Positives = 125/315 (39%), Gaps = 18/315 (5%)
Query: 77 DMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
D++ Y + L K GR A E+++ M + + + +D K + A +
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELL 424
Query: 135 NGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
L S + + TY +++ CKE ++AL + E M + + + + L R
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 484
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT 252
G+ ++ + +M ++ + D L Y+ + Y + ++V D R T
Sbjct: 485 GRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV--------DGIRGTP 536
Query: 253 YSNLASIYVKAELFE-KAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLD-AVNRV 306
Y ++ + + E + + E+M R + K Y+ ++ C +D A +
Sbjct: 537 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFL 596
Query: 307 WGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
+ + P SY +++ L K + +Q ++ D + ++ + ++
Sbjct: 597 ESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKE 656
Query: 367 DMYEEAALIFNNAKK 381
+ +++A I N K
Sbjct: 657 ERFDDAVGILKNMIK 671
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN----GLSEYAK--- 142
G+ + ALE+ + M+ KM +D + NG+ + +N GL K
Sbjct: 477 GKLKDALEMFKAMQKSKMD---------IDASRPFNGVEPDVQTYNILICGLINEGKFLE 527
Query: 143 ---------------NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
+ TY ++++ CK+ + A +F+ M F + V FN L T
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLIT 587
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
Y + G + L +M QR I D +TYI + + +++IDG +F EM +
Sbjct: 588 GYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYP 647
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLE 277
T + L ++ K EL E+A L+ L+
Sbjct: 648 DTITIRNMLTGLWSKEEL-ERAVAMLEDLQ 676
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/343 (18%), Positives = 142/343 (41%), Gaps = 17/343 (4%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY-C-VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G + A N +I M+ K + D++ Y C + GR+ A ++++ M RK++ F
Sbjct: 267 GRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTF 326
Query: 115 AVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
+ ++ K AE+ ++ + + TY ++++ +CK+ + A +F
Sbjct: 327 SALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPT 386
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ + FN L Y R + + L+++M + + + +TY + + + D++
Sbjct: 387 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 446
Query: 233 VERVFYEMCNE--CEDKCRWTT----YSNLASIYVKAELFEKAELALKKLEEMKP----- 281
+ + EM + C + T + + E+F+ + + ++ +P
Sbjct: 447 AQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVE 506
Query: 282 RDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
D + Y+ LI N L+A + P +Y ++ L K + +D Q
Sbjct: 507 PDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
F+ S+ S D+ + +I Y + M ++ +F +R
Sbjct: 567 FDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRG 609
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 11/171 (6%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELK-FLGNTVAFNNLSTMYLRLGQPEKVRPL 201
N+ TYG +++ CK T AL L KM+E+ + N V +N + + G+ L
Sbjct: 216 NQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNL 275
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+M+++ I D +TY + + E++ EM E + T+S L + +V
Sbjct: 276 FIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEML-ERKINPDVVTFSALINAFV 334
Query: 262 K-AELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVW 307
K + FE EL +EM PR Y +I +C + LDA ++
Sbjct: 335 KEGKFFEAEEL----YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMF 381
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 117/311 (37%), Gaps = 20/311 (6%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEK--YFNGLSEY 140
+ + K G++ A E+ + M R + S ++ +D K N + AAE Y
Sbjct: 330 INAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGC 389
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ + T+ L+ YC+ + + L +M E + NT+ + L + ++G +
Sbjct: 390 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQD 449
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED----------KCRW 250
L+ +M + + +T + + +F M D +
Sbjct: 450 LLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDV 509
Query: 251 TTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRV 306
TY+ L + F +AE + EEM R D Y +I C S LD ++
Sbjct: 510 QTYNILICGLINEGKFLEAE---ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 307 WGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
+ + S +F P ++ L+ K +D + F E R D +I + +
Sbjct: 567 FDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRK 626
Query: 366 KDMYEEAALIF 376
D + A IF
Sbjct: 627 VDNIDGALDIF 637
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 11/255 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ +L GR AL + M+ + + + V +D K N + A K + +SE
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY AL++ YCKE M + A + + M+ NT +N L + + K
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+N+M +R +S +TY + +ND++ R+ M +W TYS
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW-TYSVFIDTL 484
Query: 261 VKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKSTFP 315
K E+A + +K + KA Y LI YC +D A + + +L
Sbjct: 485 CKEGRVEEAGTL---FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541
Query: 316 PTNTSYLVLLQALAK 330
P + +Y VL++ L K
Sbjct: 542 PNSYTYNVLIEGLCK 556
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 120/305 (39%), Gaps = 22/305 (7%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA----EKYFNGLS 138
+ +L K GR A + + ++++ + + + +D K I A E+ N
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN--D 538
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
N YTY L+ CKE + A +L KM + V + L L+ G +
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHA 598
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
+ N M D TY ++ +Y ++ V+ V +M NE TY+ L
Sbjct: 599 LKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM-NEEGILPDLVTYTVLID 657
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
Y + L + A L+ M K +++S+ NL NR+
Sbjct: 658 GYARLGLTHR---AFDFLKCMVDTGCKPSLYIVSIL--IKNLSHENRM----------KE 702
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
T + + +++ +I + FE+ + D+ + +I + Q++ EEA + ++
Sbjct: 703 TRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 762
Query: 379 AKKRA 383
K+R
Sbjct: 763 MKERG 767
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 132/351 (37%), Gaps = 22/351 (6%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
++ + N YT+ A++N YCK A K+ + +T + +L + R +
Sbjct: 188 NQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDN 247
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+ M Q+ + ++Y + I+ ++F +M ED C T +
Sbjct: 248 AYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM---TEDNCCPTVRTYTV 304
Query: 258 SIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKS 312
IY + K E AL EMK + + Y LI C + +D ++ + +
Sbjct: 305 LIYALSGSGRKVE-ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P+ +Y L+ K ID + + ES + R + +I +K +A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA---LSEAKQFHWRPMQ 429
+ N +R + + +I Y +N++E+A LS + P Q
Sbjct: 424 MALLNKMLERKLSPS---------LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474
Query: 430 VTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
T F +E V+ A +K+ + Y+ LI Y GK+
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 18/250 (7%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDE--LKFLGNTVA-----FNNLSTMYLRLG 193
A + + L CY LM+ L ++M L+ L N ++ FN + Y ++G
Sbjct: 149 ADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIG 208
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTT 252
+ +++ Q + D TY + + +D VF M + C+ +
Sbjct: 209 NVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQR--NEVS 266
Query: 253 YSNLASIYVKAELFEKAELALKKLEEMK-----PRDRKAYHFLISLYCNTSNLDAVNRVW 307
Y+NL +A + ALK +M P R + +L + ++A+N
Sbjct: 267 YTNLIHGLCEAGRINE---ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323
Query: 308 GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
+ + P +Y VL+ L K N +D ++ E + + + +I Y ++
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383
Query: 368 MYEEAALIFN 377
M ++A I +
Sbjct: 384 MIDDAFEILD 393
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 11/255 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ +L GR AL + M+ + + + V +D K N + A K + +SE
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY AL++ YCKE M + A + + M+ NT +N L + + K
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+N+M +R +S +TY + +ND++ R+ M +W TYS
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW-TYSVFIDTL 484
Query: 261 VKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKSTFP 315
K E+A + +K + KA Y LI YC +D A + + +L
Sbjct: 485 CKEGRVEEAGTL---FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541
Query: 316 PTNTSYLVLLQALAK 330
P + +Y VL++ L K
Sbjct: 542 PNSYTYNVLIEGLCK 556
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 124/316 (39%), Gaps = 33/316 (10%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA----EKYFNGLS 138
+ +L K GR A + + ++++ + + + +D K I A E+ N
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN--D 538
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
N YTY L+ CKE + A +L KM + V + L L+ G +
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHA 598
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
+ N M D TY ++ +Y ++ V+ V +M NE TY+ L
Sbjct: 599 LKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM-NEEGILPDLVTYTVLID 657
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
Y + L + A L+ M K +++S+ NL NR+
Sbjct: 658 GYARLGLTHR---AFDFLKCMVDTGCKPSLYIVSIL--IKNLSHENRM----------KE 702
Query: 319 TSYLVLLQALAKLNAIDILK-----------QCFEEWESRCSSYDMRLADVIIRAYLQKD 367
T + + +++ +N++DI + FE+ + D+ + +I + Q++
Sbjct: 703 TRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 762
Query: 368 MYEEAALIFNNAKKRA 383
EEA + ++ K+R
Sbjct: 763 RLEEAQGLVHHMKERG 778
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 132/351 (37%), Gaps = 22/351 (6%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
++ + N YT+ A++N YCK A K+ + +T + +L + R +
Sbjct: 188 NQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDN 247
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+ M Q+ + ++Y + I+ ++F +M ED C T +
Sbjct: 248 AYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM---TEDNCCPTVRTYTV 304
Query: 258 SIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKS 312
IY + K E AL EMK + + Y LI C + +D ++ + +
Sbjct: 305 LIYALSGSGRKVE-ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P+ +Y L+ K ID + + ES + R + +I +K +A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA---LSEAKQFHWRPMQ 429
+ N +R + + +I Y +N++E+A LS + P Q
Sbjct: 424 MALLNKMLERKLSPS---------LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474
Query: 430 VTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
T F +E V+ A +K+ + Y+ LI Y GK+
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 18/250 (7%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDE--LKFLGNTVA-----FNNLSTMYLRLG 193
A + + L CY LM+ L ++M L+ L N ++ FN + Y ++G
Sbjct: 149 ADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIG 208
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTT 252
+ +++ Q + D TY + + +D VF M + C+ +
Sbjct: 209 NVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQR--NEVS 266
Query: 253 YSNLASIYVKAELFEKAELALKKLEEMK-----PRDRKAYHFLISLYCNTSNLDAVNRVW 307
Y+NL +A + ALK +M P R + +L + ++A+N
Sbjct: 267 YTNLIHGLCEAGRINE---ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323
Query: 308 GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
+ + P +Y VL+ L K N +D ++ E + + + +I Y ++
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383
Query: 368 MYEEAALIFN 377
M ++A I +
Sbjct: 384 MIDDAFEILD 393
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 133/335 (39%), Gaps = 52/335 (15%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
V L K G+ + A E I +ME + + + + I A + + +
Sbjct: 234 VNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 293
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK--- 197
+ YTYG+L++ CKE E A LF+KM E+ + N V +N L Y G E+
Sbjct: 294 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 353
Query: 198 ---------VRP-----------------------LVNQMKQRNISLDNLTYIVWMQSYS 225
+ P ++ +M+++ I D +TY + + YS
Sbjct: 354 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 413
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS-IYV---KAELFEKAELALKKLEEMKP 281
G + +++ NE K T+ S IYV + + E +L K L++
Sbjct: 414 RC----GNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 469
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGILK----STFPPTNTSYLVLLQALAKLNAIDIL 337
D ++ ++ +C N V R + +LK + PP ++ L+Q + ++
Sbjct: 470 PDVIMFNAMVDGHCANGN---VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 526
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ +E + R D + +I Y ++ ++A
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDA 561
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K + D + Y + + G + A ++ M S+ + ++ + + + ++ N
Sbjct: 393 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A+ F + + + + + A+++ +C ERA L ++MD + V FN
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
L R G+ E+ R L+++MK+R I D+++Y + Y DI RV EM
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 568
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/341 (19%), Positives = 126/341 (36%), Gaps = 44/341 (12%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YT+ ++N CKE ++A M+ L F N V++N + Y G E R +++
Sbjct: 228 YTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDA 287
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M+ + I D+ TY + ++ +F +M E TY+ L Y
Sbjct: 288 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV-EIGLVPNAVTYNTLIDGYCNKG 346
Query: 265 LFEKA-----ELALKK---------------------------LEEMKPR----DRKAYH 288
E+A E+ K ++EM+ + D Y+
Sbjct: 347 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 406
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI+ Y N A + +L PT+ +Y L+ L++ N + FE+ +
Sbjct: 407 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 466
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLD 407
S D+ + + ++ + E A ++ +++ E ++ R +
Sbjct: 467 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS------VPPDEVTFNTLMQGRCRE 520
Query: 408 LALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA 448
+ E L E K+ +P ++ +T + D+ A
Sbjct: 521 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDA 561
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T +L+ + K E A L+ +M L+ FN + + + G+ +K R + M
Sbjct: 194 TCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM 253
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + ++Y + YS +I+G R+ M + + +T Y +L S K
Sbjct: 254 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT-YGSLISGMCKEGR 312
Query: 266 FEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLV 323
E+A K+ E+ + Y+ LI YCN +L+ A + ++K P+ ++Y +
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 372
Query: 324 LLQAL 328
L+ AL
Sbjct: 373 LVHAL 377
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 170/423 (40%), Gaps = 42/423 (9%)
Query: 83 VRSLRKFGRYRHALEVIEWMES-RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE-- 139
V + K G AL ++ ME ++ + ++ +D K A+ F+ + E
Sbjct: 219 VDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKG 278
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N +TY ++N +C A L +M E K + V F+ L ++ G+ +
Sbjct: 279 ISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAE 338
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLAS 258
L N+M R I + +TY + +S N +D ER+FY M + C T+S L
Sbjct: 339 ELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPD--VITFSILID 396
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKST 313
Y A ++ + +K L EM R A Y LI +C NL+ A++ + ++ S
Sbjct: 397 GYCGA---KRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453
Query: 314 FPPTNTSYLVLLQAL---AKL-NAIDILK------------QCFEEWESRCSSYDMRLAD 357
P + LL L KL +A+++ K F + E +Y +
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTY-----N 508
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAAL 417
++I + + + EA ++ R + S + + +LD A ++
Sbjct: 509 ILICGLINEGKFSEAEELYEEMPHRGLVPDTI--TYNSVIDGLCKQSRLDEATQMFDSMG 566
Query: 418 SEAKQFHWRPMQVTVDTFFRFFEEEKDV-DGAEEFCKVLKSLNCLDFSAYSLLIKTYIAA 476
S+ + P VT T + + V DG E FC++ + + Y LI +
Sbjct: 567 SKG----FSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQV 622
Query: 477 GKL 479
G +
Sbjct: 623 GNI 625
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 13/189 (6%)
Query: 90 GRYRHALEVIEWMESRKMHFSYT--------DFAVYLDLTA---KTNGIAAAEKYFNGLS 138
G+ + ALE+ + M+ KM + D Y L + AE+ + +
Sbjct: 472 GKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMP 531
Query: 139 E--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+ TY ++++ CK+ + A +F+ M F + V F L Y ++G+
Sbjct: 532 HRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVG 591
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
+ +M +R I + +TY + + + +I+G +F EM + T + L
Sbjct: 592 DGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNML 651
Query: 257 ASIYVKAEL 265
++ K EL
Sbjct: 652 TGLWSKEEL 660
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 114/279 (40%), Gaps = 22/279 (7%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHF-------SYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
SL F H L +E S +HF + F ++ + + A + +
Sbjct: 145 SLVTFSTLLHGL-CVEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRM 203
Query: 138 SEYA--KNRYTYGALLNCYCKELMTERALALFEKMDEL-KFLGNTVAFNNLSTMYLRLGQ 194
E N+ TYG +++ CK T AL L KM+E+ + N V ++ + + G+
Sbjct: 204 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGR 263
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ L ++M+++ IS + TY + + +R+ EM E + T+S
Sbjct: 264 QTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM-FERKMSPDVVTFS 322
Query: 255 NLASIYVK-AELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGI 309
L + VK + FE EL EM PR + Y+ +I + + LDA R++ +
Sbjct: 323 VLINALVKEGKFFEAEEL----YNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYL 378
Query: 310 LKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
+ + P ++ +L+ +D + E R
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRR 417
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 124/290 (42%), Gaps = 9/290 (3%)
Query: 94 HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALL 151
HAL ++ M +H + F + + AK + A F+ + ++ N TYGA++
Sbjct: 356 HAL--LDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
CK + A+ FE+M + N + + +L + +K L+ +M R I
Sbjct: 414 GILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGIC 473
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
L+ + + + S+ + E++F ++ K TYS L Y A ++A
Sbjct: 474 LNTIFFNSIIHSHCKEGRVIESEKLF-DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532
Query: 272 ALKKL--EEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQAL 328
L + MKP D Y+ LI+ YC S +D A+ ++ S P +Y ++LQ L
Sbjct: 533 LLSSMFSVGMKP-DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
K+ + + ++ ++I+ + ++ +EA +F N
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 641
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 10/241 (4%)
Query: 150 LLNCYCKELMTERALALFEKMDELKFLG---NTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
LL C E ++ AL L M + + G + V++ + + + G +K ++M
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASIYVKAEL 265
R IS D +TY + + +D V M N C TY+++ Y +E
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNC--MTYNSILHGYCSSEQ 281
Query: 266 FEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYL 322
++A LKK+ + ++P D Y+ L+ C +++ + K P +Y
Sbjct: 282 PKEAIGFLKKMRSDGVEP-DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYC 340
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
LLQ A A+ + + D + +++I AY +++ +EA L+F+ ++
Sbjct: 341 TLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQH 400
Query: 383 A 383
Sbjct: 401 G 401
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 123/320 (38%), Gaps = 16/320 (5%)
Query: 58 GSVTGAL---NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
GSV A+ I EG T + + SL F ++ A E+I M R + + F
Sbjct: 420 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFF 479
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDE 172
+ K + +EK F+ + N TY L++ YC + A L M
Sbjct: 480 NSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFS 539
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ + V +N L Y R+ + + L +M +S + +TY + +Q H
Sbjct: 540 VGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 599
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA-----ELALKKLEEMKPRDRKAY 287
+ ++ + + + +TY+ + K L ++A L L L+ + + +
Sbjct: 600 AKELYVGI-TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ----LETRTF 654
Query: 288 HFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
+ +I D ++ S P +Y ++ + + ++ L Q F E
Sbjct: 655 NIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMED 714
Query: 347 RCSSYDMRLADVIIRAYLQK 366
+ D + + I+R LQ+
Sbjct: 715 NGCTVDSGMLNFIVRELLQR 734
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 108/279 (38%), Gaps = 22/279 (7%)
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRY-----TYGALLNCYCKELMTERALALF 167
D Y + A A +K L+ KN TY ++L+ YC + A+
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL 289
Query: 168 EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHL 227
+KM + V +N+L + G+ + R + + M +R + D TY +Q Y+
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA-- 347
Query: 228 NDIDGVERVFYEMCNECEDKCRWTTYSN------LASIYVKAELFEKAELALKKLEE--M 279
+ EM + R + + L Y K E ++A L K+ + +
Sbjct: 348 -----TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402
Query: 280 KPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILK 338
P + Y +I + C + ++ DA+ ++ P Y L+ +L + D +
Sbjct: 403 NP-NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ E R + + II ++ ++ E+ +F+
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFD 500
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 13/249 (5%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKM--DELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N ++Y +L C M++RAL LF+ M + N VA+N + + + G+ K
Sbjct: 227 NVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACS 286
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED------KCRWTTYS 254
L ++M ++ + D +TY + + + +D E V +M C Y+
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYA 346
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF 314
L + A++F K K + P FL SL + + +A +
Sbjct: 347 TLGRLKEAAKMFRKM-----KSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGH 401
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P SY LL A + F +S + D R+ +++I AY ++ M ++A L
Sbjct: 402 KPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAML 461
Query: 375 IFNNAKKRA 383
IF +++
Sbjct: 462 IFTEMQQQG 470
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/299 (16%), Positives = 112/299 (37%), Gaps = 4/299 (1%)
Query: 89 FGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYT 146
GR + A ++ M+SR + + +L K A + F+ ++ + + +
Sbjct: 348 LGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVS 407
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y LL+ Y E + LF M + FN L Y + G + + +M+
Sbjct: 408 YCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQ 467
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
Q+ +S D +TY + ++S + + F +M +S + + L
Sbjct: 468 QQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLV 527
Query: 267 EKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTNTSYLVL 324
+ EL + + + PR D ++ +I+ C + + ++ ++ P ++ L
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSL 587
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ + +D + + E D+ ++ Y + + +F +++
Sbjct: 588 IDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKG 646
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S G + ++++ + M+ + + + + ++ A++YFN
Sbjct: 80 EDMWVLMIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVISRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + + +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-YGIKANAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LIS C NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAGQYD 343
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 154/361 (42%), Gaps = 22/361 (6%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
++G V+ +++ Y + S+ K A ++ M S+ + ++ +
Sbjct: 216 VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGK 275
Query: 127 IAAAEKYFNG--LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A FN L + YT+ L+N +CK+ + +F+ M + N V +N+
Sbjct: 276 LKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--N 242
L Y + + K + + N M Q ++ D +Y + + + + D +F EM N
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTS 298
D TYS+L K+ + AL+ +++M P + Y+ ++ C T
Sbjct: 396 IIPD---VVTYSSLIDGLSKS---GRISYALQLVDQMHDRGVPPNICTYNSILDALCKTH 449
Query: 299 NLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
+D A+ + F P ++Y +L++ L + ++ ++ FE+ + + D+
Sbjct: 450 QVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 509
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA---LNEME 414
++I+ + + ++ EA + +K N K+ E ++ + + D+A L EM
Sbjct: 510 IMIQGFCVEGLFNEALALL--SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMI 567
Query: 415 A 415
A
Sbjct: 568 A 568
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 138/340 (40%), Gaps = 14/340 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
++ +YG L++ CK T AL L +++D N V +N + ++ + L
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++M + IS D +TY + + L + +F +M E K T++ L + + K
Sbjct: 249 SEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE-NIKPDVYTFNILVNAFCK 307
Query: 263 AELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNT 319
++ + + + +KP + Y+ L+ YC ++ ++ + + P
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKP-NFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
SY +++ K+ D F+E + D+ +I + A + +
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426
Query: 380 KKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFF 439
R + S + ++ Q+D A+ A L++ K ++P T +
Sbjct: 427 HDRGVPPN--ICTYNSILDALCKTHQVDKAI----ALLTKFKDKGFQPDISTYSILIKGL 480
Query: 440 EEEKDVDGAEEFCK--VLKSLNCLDFSAYSLLIKTYIAAG 477
+ ++ A + + ++K N LD AY+++I+ + G
Sbjct: 481 CQSGKLEDARKVFEDLLVKGYN-LDVYAYTIMIQGFCVEG 519
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 112/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + ++ +++YFN
Sbjct: 80 EDMWVMMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFN 139
Query: 136 GLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ R+T+ L+ + E A FE M + + + +N + Y R+
Sbjct: 140 KMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREITPDVITYNTMINGYNRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK+R I +TY ++ Y+ ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFLEMKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMKG-LGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LIS C NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIEYYCKAGQYD 343
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 129/302 (42%), Gaps = 23/302 (7%)
Query: 91 RYRHALEVIEWMESRKMHFSYTD---FAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRY 145
++ AL +W +K + S D A+ + + K +++A FNGL E ++ + Y
Sbjct: 150 KFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVY 209
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP-EKVRPLVNQ 204
+Y +L++ + A+ +F+KM+E + +N + ++ ++G P K+ LV +
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNECEDKCRWTTYSNLASIYVK 262
MK I+ D TY + + +VF EM DK TY+ L +Y K
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDK---VTYNALLDVYGK 326
Query: 263 AELFEKAELALKKLEEM-----KPRDRKAYHFLISLYCNTSNLDAVNRVWGIL--KSTFP 315
+ + + A+K L EM P Y+ LIS Y LD + + K T P
Sbjct: 327 SH---RPKEAMKVLNEMVLNGFSP-SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
T Y LL + ++ FEE + ++ + I+ Y + + E I
Sbjct: 383 DVFT-YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 376 FN 377
F+
Sbjct: 442 FD 443
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 129/301 (42%), Gaps = 24/301 (7%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT----NGIAA-AEKY-FNGLSEYAKN 143
GRYR A+ V + ME + + V L++ K N I + EK +G+ A +
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI---APD 278
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
YTY L+ C + + + A +FE+M F + V +N L +Y + +P++ ++N
Sbjct: 279 AYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLN 338
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT---TYSNLASIY 260
+M S +TY + +Y+ DG+ E+ N+ +K TY+ L S +
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYAR----DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 261 VKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVWG-ILKSTFP 315
+A K E A+ EEM+ K ++ I +Y N + +++ I
Sbjct: 395 ERA---GKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P ++ LL + + F+E + + + +I AY + +E+A +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 376 F 376
+
Sbjct: 512 Y 512
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/337 (17%), Positives = 138/337 (40%), Gaps = 12/337 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T+ A + Y + +F++++ + V +N L ++ + G +V +
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK+ + T+ + +YS + V+ M + +TY+ + + +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP-DLSTYNTVLAALAR 536
Query: 263 AELFEKAELALKKLEEMKPRDRK-AYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTS 320
++E++E L ++E+ + + + Y L+ Y N + ++ + + P
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
L+ +K + + ++ F E + R S D+ + ++ Y ++ M +A + + K
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 381 KRANASARFFKSRESF-MIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT-FFRF 438
+R F S ++ + Y+ SR D + E L E +P ++ +T + +
Sbjct: 657 ERG-----FTPSMATYNSLMYMHSRSADFG--KSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 439 FEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIA 475
+ D + F ++ S D Y+ I +Y A
Sbjct: 710 CRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 132/286 (46%), Gaps = 7/286 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ S K G + AL ++ ME ++ ++ ++L+ + + A F+ L S
Sbjct: 197 ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 256
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y +++N Y K + A L ++M+E L NTV+++ L ++Y+ + +
Sbjct: 257 TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 316
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ +MK+ N +LD T + + Y L+ + +R+F+ + + + + +Y+ + +Y
Sbjct: 317 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL-RKMDIEPNVVSYNTILRVY 375
Query: 261 VKAELFEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
+AELF +A + L +L + K ++ Y+ +I +Y T + A N V + P
Sbjct: 376 GEAELFGEA-IHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 434
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
+Y ++ K +D F++ S D L +I AY
Sbjct: 435 AITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 6/258 (2%)
Query: 75 RKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKY 133
R+ + + V L + ++ +L +++W+ E K S + V L + A
Sbjct: 118 RQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGL 177
Query: 134 FNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLR 191
F+ + + A +RYTY L+ + KE M + AL+ +KM++ + G+ V ++NL + R
Sbjct: 178 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 237
Query: 192 LGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT 251
L K + +++K+ I+ D + Y + Y + EM NE
Sbjct: 238 LCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM-NEAGVLPNTV 296
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGI 309
+YS L S+YV+ F +A +++E+ D + +I +Y + +R+ W +
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 310 LKSTFPPTNTSYLVLLQA 327
K P SY +L+
Sbjct: 357 RKMDIEPNVVSYNTILRV 374
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 11/260 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K G+ A V++ M R + + +TN + A K + E
Sbjct: 134 IAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGL 193
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y ALLN CK+ E L E+M E +T ++N + G+ E+
Sbjct: 194 TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGK 253
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT--TYSNLAS 258
++ +M ++ D +TY M + ++ +D ER+ +M +C T TY+ L
Sbjct: 254 ILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR---RCAPTVITYTTLIG 310
Query: 259 IYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFP 315
+ +A+ A ++ + + P D Y+ L+ C L+ + + ++ +
Sbjct: 311 GFSRADRLADAYRVMEDMFKAGISP-DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA 369
Query: 316 PTNTSYLVLLQALAKLNAID 335
P +Y +L+ L KL +D
Sbjct: 370 PDVVTYSILVNGLCKLGKVD 389
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 119/315 (37%), Gaps = 34/315 (10%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYG 148
R A V+E M + + LD K + A + + E A + TY
Sbjct: 317 RLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYS 376
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
L+N CK + A L E M E N V FN + + + G+ ++ ++ MK+
Sbjct: 377 ILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436
Query: 209 NISLDNLTYIVWMQSYSHLN-------------DIDGVERVFYEMCNE------------ 243
+ + D +TY + Y N D + +C+
Sbjct: 437 SCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDL 496
Query: 244 -CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTS 298
+ C T+ S+ A I E+ + ALK L+ M R + Y LI+ C T
Sbjct: 497 MTKQGCPPTS-SHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTK 555
Query: 299 NL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
+ DA+N + +L+ P +Y L+ K+N +D QCF+ D +
Sbjct: 556 RVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYN 615
Query: 358 VIIRAYLQKDMYEEA 372
++I + Q E+A
Sbjct: 616 ILISGFCQSGNVEKA 630
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 78/432 (18%), Positives = 168/432 (38%), Gaps = 39/432 (9%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ + G + LE+ M +R+ L + + A +F G +
Sbjct: 31 ITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKMWCSP 90
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+TY L++ C+ + A L ++M + + +N L ++G+ + R ++
Sbjct: 91 TAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVL 150
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M +R+ D +TY + N +D ++ +M E Y+ L + K
Sbjct: 151 KMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKM-KESGLTPDTVAYNALLNGLCK 209
Query: 263 AELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVW-GILKSTFPPT 317
E+ K LEEM R+ +Y+ +++ C + + ++ +++ P
Sbjct: 210 QNQLEEVS---KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPD 266
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWES-RCS----SYDMRL-----ADVIIRAY-LQK 366
+Y L+ K++ +D ++ E+ RC+ +Y + AD + AY + +
Sbjct: 267 VVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVME 326
Query: 367 DMYEEAA----LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA-----------LN 411
DM++ + +N + + ++ E + + D+ L
Sbjct: 327 DMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLG 386
Query: 412 EMEAA---LSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYS 467
+++ A L + +P VT +T F + VD + +++K ++C D YS
Sbjct: 387 KVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYS 446
Query: 468 LLIKTYIAAGKL 479
LI Y A ++
Sbjct: 447 TLIDGYCKANRM 458
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
+ L T + R G + V + N+M R S D +T+ +++Y + D+D F
Sbjct: 27 YGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRG-- 84
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNT 297
+ C T ++ I+ + ++ + A + L+EM + D Y+ LI+ C
Sbjct: 85 ---KMWCSPTAFTYCILIHGLCQC-QRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140
Query: 298 SNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
+DA V +L+ + P +Y L+ + NA+D ++ E+ + + D
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAY 200
Query: 357 DVIIRAYLQKDMYEEAA 373
+ ++ +++ EE +
Sbjct: 201 NALLNGLCKQNQLEEVS 217
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 7/250 (2%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
++ A + TY L++ YC+ E A+ L +M+ + L +N + G+ +
Sbjct: 370 MAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMK 429
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
+V L+N+M +R + D++T + +Y D+ +V M E + TY L
Sbjct: 430 EVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMM-ESGLQLDQFTYKAL 488
Query: 257 ASIYVKAELFEKAELALKKLEEMKPRDRKAYHFL---ISLYCNTSNLDAVNRVWG-ILKS 312
+ KA+ ++A+ AL E M Y L + CN +N AV + ++K
Sbjct: 489 VHGFCKAKELDEAKEAL--FEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKR 546
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
FPP Y L++ L K ID+ F E + + D + + AYL A
Sbjct: 547 GFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAA 606
Query: 373 ALIFNNAKKR 382
I N K+
Sbjct: 607 LDILNEMAKK 616
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 8/219 (3%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYG 148
R AL V + M +R++ + L AK+ A A K F+ ++ A N + Y
Sbjct: 217 RPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYN 276
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
A+L+ K A +L +MD + +FN + +Y R G + + +M+ +
Sbjct: 277 AMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQ 336
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYE--MCNECEDKCRWTTYSNLASIYVKAELF 266
+ D +T+ + + ++ E M D TY+ L Y +A
Sbjct: 337 GVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDH---VTYTTLVDGYCRAGDL 393
Query: 267 EKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVN 304
E+A ++E M A Y+ ++ C + VN
Sbjct: 394 EEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVN 432
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R+++ ++ YC++ M A+ + E+M+ + V +N+L + + ++ L+
Sbjct: 306 DRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLL 365
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT-TYSNLASIYV 261
+M ++ D++TY + Y D++ ++ EM E TY+ +
Sbjct: 366 REMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEM--EAMGMLPGVATYNAILRKLC 423
Query: 262 KAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRV-WGILKSTFPPTNT 319
+ ++ + L +++E K + D + LI+ YC ++ + +V +++S
Sbjct: 424 EDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQF 483
Query: 320 SYLVLLQALAKLNAIDILKQCFEE 343
+Y L+ K +D K+ E
Sbjct: 484 TYKALVHGFCKAKELDEAKEALFE 507
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T G ++N YC+E E AL F +M EL N FN+L +L + + V +V
Sbjct: 530 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ M++ + D +T+ M ++S + D+ E ++ +M D +S LA Y +
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP-DIHAFSILAKGYAR 648
Query: 263 AELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVW----GILKSTFPPT 317
A EKA+ L ++ + R Y +IS +C+ + +V+ GI+ P
Sbjct: 649 AGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV--GLSPN 706
Query: 318 NTSYLVLLQALAK 330
T+Y L+ +
Sbjct: 707 LTTYETLIWGFGE 719
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G+ AL M+ +H + F + N + + + + E+ + T+
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L+N + +R ++ M E + AF+ L+ Y R G+PEK + ++NQM++
Sbjct: 605 STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRK 664
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
+ + + Y + + ++ +V+ +MC TTY L + +A+
Sbjct: 665 FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPW 724
Query: 268 KAELALKKLE 277
KAE LK +E
Sbjct: 725 KAEELLKDME 734
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 159/399 (39%), Gaps = 20/399 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
V + K G AL+++ M+ R + ++ +D + I AA F +
Sbjct: 177 VNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 236
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY +L+ CK + L + M K + N + FN L ++++ G+ ++
Sbjct: 237 KSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANE 296
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
L +M + IS + +TY M Y N + + M N C T+++L
Sbjct: 297 LYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD--IVTFTSLIKG 354
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPT 317
Y K + ++ +K+ + + Y L+ +C + L+ ++ + S P
Sbjct: 355 YCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPD 414
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y +LL L ++ + FE+ + + D+ + +II + E+A +F
Sbjct: 415 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFC 474
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQL--DLALNEMEAALSEAKQFHWRPMQVTVDTF 435
+ + + + M Y + L +L+E L + ++ P T +T
Sbjct: 475 SLPCKG--------VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTL 526
Query: 436 FRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYI 474
R + D+ + + + +KS FSA + IK I
Sbjct: 527 IRAHLRDGDLTASAKLIEEMKSCG---FSADASSIKMVI 562
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 139/335 (41%), Gaps = 31/335 (9%)
Query: 62 GALNAYI-----MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G ++A I ME K ++ ++ Y V L K G++ +++++ M SRK+ + F
Sbjct: 219 GCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITF 278
Query: 115 AVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
V +D+ K + A + + + + N TY +L++ YC + A + + M
Sbjct: 279 NVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVR 338
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ V F +L Y ++ + ++ L ++ +R + + +TY + +Q + ++
Sbjct: 339 NNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEI 398
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE------KAELALKKLEEMKPR---- 282
E +F EM + L + L + K E AL+ E+++
Sbjct: 399 AEELFQEM----------VSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNL 448
Query: 283 DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
D Y +I C + DA N + P +Y V++ L K ++
Sbjct: 449 DIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 508
Query: 342 EEWESRCSSYDMRLADVIIRAYLQK-DMYEEAALI 375
+ E + + + +IRA+L+ D+ A LI
Sbjct: 509 RKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLI 543
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 127/343 (37%), Gaps = 10/343 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + T+ L+N C E A+ L +M E N V +N++ + G
Sbjct: 131 YEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLAL 190
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L+ +M +RN+ D TY + S ID +F EM + K TY++L
Sbjct: 191 DLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSLVTYNSLVGG 249
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPT 317
KA + LK + K + ++ LI ++ L N ++ ++ P
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPN 309
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y L+ N + + S D+ +I+ Y + +E +F
Sbjct: 310 TITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFR 369
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
KR + S + + +S +L++A E E P +T
Sbjct: 370 KISKRGLVANTVTYS--ILVQGFCQSGKLEIA----EELFQEMVSLGVLPDVMTYGILLD 423
Query: 438 FFEEEKDVDGA-EEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
+ ++ A E F + KS LD Y+++I+ GK+
Sbjct: 424 GLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKV 466
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 84/219 (38%), Gaps = 21/219 (9%)
Query: 16 LVRQLCSTPTETVSQRIAAPTPFPTGNED-KLYKRLSALGATGGSVTGAL--NAYIMEGK 72
+VR CS T + I +E KL++++S G +VT ++ + GK
Sbjct: 336 MVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGK 395
Query: 73 --------------TVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
V D++ Y + L G+ ALE+ E ++ KM+ + +
Sbjct: 396 LEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTI 455
Query: 117 YLDLTAKTNGIAAAEKYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELK 174
++ K + A F L N TY +++ CK+ A L KM+E
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
N +N L +LR G L+ +MK S D
Sbjct: 516 NEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 554
>gi|297736068|emb|CBI24106.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTY 147
G +E+++ M++ K+ S F ++ AK G+ AA K ++ L + TY
Sbjct: 267 GLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTY 326
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+++N YC+ + +A +F +M++ F VA++++ MY + G+ + LV +MK+
Sbjct: 327 ASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKE 386
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
R + Y M + + ++ VE+++ EM + R +Y+++ S Y KA FE
Sbjct: 387 RGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDR-VSYTSVISAYSKAGDFE 445
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/349 (18%), Positives = 135/349 (38%), Gaps = 46/349 (13%)
Query: 88 KFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--K 142
K Y + + + ESRK+ FS + + + K A ++F +++ +
Sbjct: 157 KIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILE 216
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y +L+ + + A LF + +E K L + F L MY+ G E+ +V
Sbjct: 217 DSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTIEIV 276
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASIYV 261
MK I + + + + ++ + +V+ E+ CE TY+++ ++Y
Sbjct: 277 KAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPG--QVTYASIINVYC 334
Query: 262 KAELFEKAELALKKLE--------------------------------EMKPRDRK---- 285
+ EL+ KAE+ ++E +MK R K
Sbjct: 335 RMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVW 394
Query: 286 AYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
Y+ L+ ++ NL V ++W +K P SY ++ A +K + + + E+
Sbjct: 395 VYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEF 454
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA-SARFFKS 392
D +A +++ + + +E + + K R ++S
Sbjct: 455 RMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRS 503
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 128/315 (40%), Gaps = 63/315 (20%)
Query: 19 QLCSTPTETVSQRIAA-----PTPFPTGNE-DKLYKRLSALGATGGSVTGALNAYIMEGK 72
L P+ TV ++ P P P +E ++L + L + LN Y+ K
Sbjct: 38 HLPPRPSTTVVSCVSTRPRRKPGPKPDKSEVEELVRVLMKNFGGERPLISTLNKYV---K 94
Query: 73 TVRKDMLEYCVRSLRKFGR---YRHALEVIEWMESRKMHFSYTDFAVYLDLTA------- 122
+R E+C R + G+ + LEV WM+ ++ + + D VY L +
Sbjct: 95 VIR---TEHCFRLFEELGKTDKWLQCLEVFRWMQKQRWYIA--DNGVYSKLISVMGKKGQ 149
Query: 123 -----------------------------------KTNGIAAAEKYFN---GLSEYAKNR 144
K+ + A YF+ G+ N
Sbjct: 150 TRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSKALIKALGYFDKMKGMERCKPNI 209
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY LL + + +A ALF++++E + FN + Y + G +++ ++++
Sbjct: 210 VTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSR 269
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK D +T+ V + SY + D +E+VF + ++K T++++ + Y KA
Sbjct: 270 MKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLL-RSKEKPTLPTFNSMITNYGKAR 328
Query: 265 LFEKAELALKKLEEM 279
L EKAE KK+ +M
Sbjct: 329 LKEKAENVFKKMTDM 343
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 119/277 (42%), Gaps = 10/277 (3%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ L+ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ + +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMXEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LI+ C + +LDA + V ++
Sbjct: 259 STLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEE 343
+ + P Y VL++ K A+ +L + E+
Sbjct: 319 RLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKVIEK 355
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 128/293 (43%), Gaps = 15/293 (5%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLN 152
A+EV + M+ + + + + +++ K N ++ + F + N TY AL+N
Sbjct: 261 AVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVN 320
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
+ +E + E+A +FE+M + + A+N L Y R G P+ + + M+
Sbjct: 321 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEP 380
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN--LASIYVKAELFEKAE 270
D +Y + + ++ E F E+ + R T S+ L S + ++ + E
Sbjct: 381 DRASYNILVDAFGRAGLHQEAEAAFQELKQQ---GMRPTMKSHMLLLSAHARSGNVARCE 437
Query: 271 LALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-----TFPPTNTSYLV 323
+ +L + ++P D A + +++ Y LD + R++ ++ P ++Y V
Sbjct: 438 EVMAQLHKSGLRP-DTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNV 496
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++ A + +D ++ F +R + D+ I AY +K Y + +F
Sbjct: 497 MVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVF 549
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 79/201 (39%), Gaps = 5/201 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL YC RA + +M +N L+ EK + +M
Sbjct: 209 TYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRM 268
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ + TY + + Y N RVF EM K TY+ L + + + L
Sbjct: 269 KKERCRTNTETYTLMINVYGKANQPMSSLRVFREM-KSVGCKPNICTYTALVNAFAREGL 327
Query: 266 FEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYL 322
EKAE +++++ +P D AY+ L+ Y + ++ +++ P SY
Sbjct: 328 CEKAEEVFEEMQQAGHEP-DVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYN 386
Query: 323 VLLQALAKLNAIDILKQCFEE 343
+L+ A + + F+E
Sbjct: 387 ILVDAFGRAGLHQEAEAAFQE 407
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 49/272 (18%)
Query: 135 NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMD----------------------- 171
NG+ A Y A L+ K +E+A+ ++++M
Sbjct: 236 NGIPPTAT---VYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQ 292
Query: 172 ---------ELKFLG---NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
E+K +G N + L + R G EK + +M+Q D Y
Sbjct: 293 PMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNA 352
Query: 220 WMQSYSHLNDIDGVERVFYEMCN-ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
M++YS G +F M + CE +Y+ L + +A L ++AE A ++L++
Sbjct: 353 LMEAYSRAGLPQGASEIFSLMEHMGCEPD--RASYNILVDAFGRAGLHQEAEAAFQELKQ 410
Query: 279 --MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAID 335
M+P K++ L+S + + N+ V L KS P + +L A + +D
Sbjct: 411 QGMRP-TMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLD 469
Query: 336 ILKQCFEEWE----SRCSSYDMRLADVIIRAY 363
+++ F E + + D +V++ AY
Sbjct: 470 DMERLFAAMERGDGAIAGAPDTSTYNVMVNAY 501
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 131/296 (44%), Gaps = 9/296 (3%)
Query: 74 VRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
+R D++ Y + + + A+ V E M + + + + + + AE
Sbjct: 289 LRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAE 348
Query: 132 KYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
+ F L E + + TY +LL + KE ++ E++ + F N + +N + MY
Sbjct: 349 RLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMY 408
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR 249
++G+ + L ++M+ + D +TY V + S ++ I +V +M + K
Sbjct: 409 GKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMAD-AGLKPT 467
Query: 250 WTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
+S L Y K AE + +KP DR AY ++ ++ + + + R++
Sbjct: 468 LVAFSALICAYAKGGRRADAEKTFDCMIASGVKP-DRLAYLVMLDVFARSGETEKMLRLY 526
Query: 308 -GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
++ + P + Y VLL ALAK + + +++ ++ E C ++ ++I+A
Sbjct: 527 RTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQMSLGVISTILIKA 582
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 109/271 (40%), Gaps = 19/271 (7%)
Query: 68 IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
I G D + +R+L GR V+ ++ S + + LD AK +
Sbjct: 807 IKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDV 866
Query: 128 AAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
K +NG+ + Y N + Y ++ + C + +M+ F + FN+L
Sbjct: 867 FEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSL 926
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSH-LNDIDGVERVFYEMCNEC 244
MY G ++ + + + + D TY + Y L +G + + NE
Sbjct: 927 LNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEG-----FTLLNEM 981
Query: 245 EDKC---RWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNT 297
+ + +Y +L + KAEL E+A+ + EEM+ + +R YH ++ +Y N
Sbjct: 982 GKRGLTPKLQSYKSLLAASAKAELREQAD---QLFEEMRSKSYQLNRSIYHMMMKIYRNA 1038
Query: 298 SNLDAVNRVWGILK-STFPPTNTSYLVLLQA 327
N + ++K PT + +L+ +
Sbjct: 1039 GNHSKAENLLAVMKEDGIEPTIATMHILMTS 1069
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Query: 130 AEKYFNGLSEYAK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
AE GL + + +R + AL++ Y + + E+A A+F+ M + L + N +
Sbjct: 765 AEILVKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRA 824
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC 248
+ G+ +++ +V +++ + + T ++ + +++ D+ V +++ M
Sbjct: 825 LIVDGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGM-KAAGYLP 883
Query: 249 RWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
Y ++ S+ F EL + ++E KP D ++ L+++Y N D +V
Sbjct: 884 NMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKP-DLSIFNSLLNMYTAAGNFDRTTQV 942
Query: 307 W-GILKSTFPPTNTSYLVLL 325
+ IL++ P +Y L+
Sbjct: 943 YQSILEAGLEPDEDTYNTLI 962
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 31/278 (11%)
Query: 70 EGKTVR--KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
EG TV+ M+ RS GR+ A ++++ M R + F ++ +K+ +
Sbjct: 217 EGATVQVFNAMMGVYARS----GRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCL 272
Query: 128 AAA-------EKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
AA E +GL + TY L++ + E A+ +FE+M + +
Sbjct: 273 AAGVALDLLFEVRQSGLR---PDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLW 329
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+N + +++ R G+ E+ L ++ ++ D +TY + +++ ++D VE E+
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEEL 389
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP----RDRKAYHFLISLYCN 296
K TY+ + +Y K + +LA+ +EM+ D Y +I +
Sbjct: 390 VKAGFKKNE-ITYNTMIHMYGK---MGRLDLAVGLYDEMRAVGCTPDAVTYTVMID---S 442
Query: 297 TSNLDAVNRVWGILK----STFPPTNTSYLVLLQALAK 330
+D + +L+ + PT ++ L+ A AK
Sbjct: 443 LGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAK 480
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 125/308 (40%), Gaps = 53/308 (17%)
Query: 120 LTAKTNGIAAAEKYFNGLS-EY-AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
L K I+A E+Y L +Y +N Y L+ C + + A +F M +
Sbjct: 649 LCRKQTSISAYEQYSQRLMLKYPGQNCNLYEHLITCLVEAELFSEACQVFCDMQFIGIEA 708
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT-YIVWMQSYSHLNDIDGVERV 236
+ + ++ + Y +LG PE L++ Q I L+ L+ ++ +++Y ++
Sbjct: 709 SKNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRVIIIEAYGNI--------- 759
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCN 296
+L+++AE+ +K L + DR+ ++ LI Y
Sbjct: 760 ---------------------------KLWQQAEILVKGLRQASGIDRRIWNALIHAYAE 792
Query: 297 TSNLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
+ + V+ + T P PT S +++AL +D L E + D ++
Sbjct: 793 SGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQ----DMDFKI 848
Query: 356 ADVIIRAYLQKDMYEEAALIFN-----NAKKRAN--ASARFFKSRESFMIYYLRSRQLDL 408
+ + L D + +A +F N K A + ++S S + ++ R R ++L
Sbjct: 849 SKSTV--LLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVEL 906
Query: 409 ALNEMEAA 416
+ EME A
Sbjct: 907 MIAEMEGA 914
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 174/455 (38%), Gaps = 92/455 (20%)
Query: 70 EGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTA--KTNGI 127
+G+ + + ML V S + GR++ +LE M+ D A L + K +
Sbjct: 245 QGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKL 304
Query: 128 AAAEKYF-----NGLSEYAKNRYTYGALLNCY---------------------------- 154
AE F NG+S N TY +++ C+
Sbjct: 305 DMAENLFAQMINNGVS---CNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTY 361
Query: 155 -------CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
CK M E+A + +KM E N +N L + +PE+ LV M+Q
Sbjct: 362 TIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQ 421
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
+ + TY + L +D + +F E
Sbjct: 422 GGVPPNIYTYTILTHGLCKLRRLDRAKEMFNE---------------------------- 453
Query: 268 KAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQ 326
AL + +KP +R Y+ L++ YC S L +A++ + + ++ P + +Y L+Q
Sbjct: 454 ----ALAR--GLKP-NRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQ 506
Query: 327 ALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANAS 386
L + N + + +E E++ + +++ R + +++A++ + K R A
Sbjct: 507 GLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAY 566
Query: 387 ARFFKSRESFMIYYLRSRQLDLA--LNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKD 444
S YYL L A + E +A L E + P T +T + F +
Sbjct: 567 --------SASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGR 618
Query: 445 VDGAEEFCK-VLKSLNCLDFSAYSLLIKTYIAAGK 478
+D A+ ++++ D +Y++LIK + G+
Sbjct: 619 LDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGR 653
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 127/302 (42%), Gaps = 46/302 (15%)
Query: 70 EGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
+ K ++ D++ Y V+ L G HAL+V+ M H + + ++ K I
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412
Query: 128 AAAEKYFNG--LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
+ A N + Y + +T+ L++ YCK L + AL L E+M E +T+ +N++
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC- 244
+ G+ +V +M + + +TY + ++++ N ++ +V +M E
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532
Query: 245 -EDKCRWTTY-------SNLASIYVKAELFEKAE-------------------------L 271
D + T +L Y+ LF+K E +
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYL---LFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 589
Query: 272 ALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQ 326
A K +EM + +A Y LI C T+N+D A + ++K F P+ +++ ++
Sbjct: 590 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 649
Query: 327 AL 328
+L
Sbjct: 650 SL 651
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 132/332 (39%), Gaps = 28/332 (8%)
Query: 63 ALNAYIMEGKTVRKDM------LEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
L A ++ GK +++ M +R L + GR A+ +++ M + ++ D
Sbjct: 203 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA----YAVPDVVT 258
Query: 117 YLDLT---AKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMD 171
Y L K + A Y + + +TY +++ YCK M + A L +
Sbjct: 259 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 318
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
F+ + V + +L G E+ L N+ + + I D + Y ++ I
Sbjct: 319 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 378
Query: 232 GVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKK--LEEMKPRDRKAYH 288
+V EM E C + TY+ + + K A + + ++ P D ++
Sbjct: 379 HALQVMNEMAEEGCHPDIQ--TYNIVINGLCKMGNISDATVVMNDAIMKGYLP-DVFTFN 435
Query: 289 FLISLYCNTSNLDA----VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
LI YC LD+ V R+W + P +Y +L L K ++ + + F+E
Sbjct: 436 TLIDGYCKRLKLDSALQLVERMW---EYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 492
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ + +++I + + + EEA+ +
Sbjct: 493 ILKGCHPNPITYNILIENFCRSNKMEEASKVI 524
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFN 139
Query: 136 GLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ R+T+ ++ + E A FE M + + + +N + Y R+
Sbjct: 140 KMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK +NI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYG-IKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LIS C NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAGQYD 343
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 127/302 (42%), Gaps = 46/302 (15%)
Query: 70 EGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
+ K ++ D++ Y V+ L G HAL+V+ M H + + ++ K I
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411
Query: 128 AAAEKYFNG--LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
+ A N + Y + +T+ L++ YCK L + AL L E+M E +T+ +N++
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC- 244
+ G+ +V +M + + +TY + ++++ N ++ +V +M E
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531
Query: 245 -EDKCRWTTY-------SNLASIYVKAELFEKAE-------------------------L 271
D + T +L Y+ LF+K E +
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYL---LFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 588
Query: 272 ALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQ 326
A K +EM + +A Y LI C T+N+D A + ++K F P+ +++ ++
Sbjct: 589 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 648
Query: 327 AL 328
+L
Sbjct: 649 SL 650
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 132/332 (39%), Gaps = 28/332 (8%)
Query: 63 ALNAYIMEGKTVRKDM------LEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
L A ++ GK +++ M +R L + GR A+ +++ M + ++ D
Sbjct: 202 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA----YAVPDVVT 257
Query: 117 YLDLT---AKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMD 171
Y L K + A Y + + +TY +++ YCK M + A L +
Sbjct: 258 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 317
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
F+ + V + +L G E+ L N+ + + I D + Y ++ I
Sbjct: 318 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 377
Query: 232 GVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKK--LEEMKPRDRKAYH 288
+V EM E C + TY+ + + K A + + ++ P D ++
Sbjct: 378 HALQVMNEMAEEGCHPDIQ--TYNIVINGLCKMGNISDATVVMNDAIMKGYLP-DVFTFN 434
Query: 289 FLISLYCNTSNLDA----VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
LI YC LD+ V R+W + P +Y +L L K ++ + + F+E
Sbjct: 435 TLIDGYCKRLKLDSALQLVERMW---EYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 491
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ + +++I + + + EEA+ +
Sbjct: 492 ILKGCHPNPITYNILIENFCRSNKMEEASKVI 523
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 38/339 (11%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWME-SRKMHFSYTDFAVYLDLTAKTN 125
ME K D + Y + L K GR A+E +E + + ++ +D
Sbjct: 270 MEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLID------ 323
Query: 126 GIAAAEKYFNGL---------SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
G+ A +Y G ++++ + Y ++ + + A A F++M E +F
Sbjct: 324 GLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFT 383
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
+T +N L G + R L+++M Q N+ LD T+ + + +D +V
Sbjct: 384 PDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQV 443
Query: 237 FYEMCNECEDKCRWT--TYSNLASIYVKAELFEKAELALKKLE--------------EMK 280
F M E C T TY+ L +A E+A + K+E +
Sbjct: 444 FDGM---VEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQ 500
Query: 281 PRDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQ 339
+D ++ L+ C + L A + GI+ S P +Y LL L K+ +D +
Sbjct: 501 VKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALR 560
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
F E + + S D +I + L+ Y +A +F +
Sbjct: 561 LFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQD 599
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 112/307 (36%), Gaps = 29/307 (9%)
Query: 90 GRYRHALEVIEWMES----RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
GR+ A++ ME R F Y AV L A + A +N + N
Sbjct: 151 GRHHEAVDAFSRMEGEFGCRPTTFVYN--AVLRVLVASGGVVPLALALYNRMVAAGCLPN 208
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
R TY L++ CK AL LF++M + N L + GQ ++ L+N
Sbjct: 209 RATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLN 268
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDID-GVERVFYEMCNECEDKCRWT--------TYS 254
M+ + D +TY ++ +D +ER+ + R T YS
Sbjct: 269 SMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERL---------EALRRTGTFVLGLKGYS 319
Query: 255 NLA-SIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
L +++ E + ++ LE+ D Y +I +D + +K
Sbjct: 320 CLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKE 379
Query: 313 T-FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
F P Y LL+AL +D + E D ++I +K + +E
Sbjct: 380 KRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDE 439
Query: 372 AALIFNN 378
A +F+
Sbjct: 440 AMQVFDG 446
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 109/273 (39%), Gaps = 13/273 (4%)
Query: 67 YIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
Y ME K +R D + Y + L GR+ A ++ M RK+ + F +D K
Sbjct: 733 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 792
Query: 125 NGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
+ A + + N +TY +L+N +C A +F+ M + V +
Sbjct: 793 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 852
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N L T + + + E L +M + + D TY + Y ++ ++VF M
Sbjct: 853 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV- 911
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD 301
+C TY+ L EKA + ++ L++ + D Y+ +I C T D
Sbjct: 912 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT---D 968
Query: 302 AVNRVWGILKS----TFPPTNTSYLVLLQALAK 330
+ W + +S P +Y+ ++ L +
Sbjct: 969 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1001
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 104/268 (38%), Gaps = 43/268 (16%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME K + D++ Y + L GR+ A ++ M R ++ F +D+ K
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 127 IAAAEKYF-------------------NGLSEYAK------------------NRYTYGA 149
+ A++ + NGL + + N TY
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
L++ +CK M + + LF++M F + +N L Y ++G+ + M R
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
++ D +T+ + + +I+ F +M E E Y+ + KA+ EKA
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDM-RESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 270 -ELALK-KLEEMKPRDRKAYHFLISLYC 295
EL + +E +KP D + Y +I C
Sbjct: 441 WELFCRLPVEGVKP-DARTYTIMILGLC 467
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 96/240 (40%), Gaps = 5/240 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + T+G+LL+ +C A +L M + + N V +N L + G+
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L+N+M+++ + D +TY + + R+ +M + T++ L +
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP-DVVTFTALIDV 255
Query: 260 YVK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL--KSTFPP 316
+VK L E EL + ++ + Y+ +I+ C L + + ++ K FP
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
T Y L+ K +D + F+ + D+ + +I Y Q A IF
Sbjct: 316 VVT-YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 91/235 (38%), Gaps = 5/235 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T G+LLN +C+ + A++L + MD F+ N V +N + + + M
Sbjct: 676 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 735
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK-AE 264
+++ I D +TY + S+ R+ +M D ++ L +VK
Sbjct: 736 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP-NVIFFTALIDTFVKEGN 794
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL--KSTFPPTNTSYL 322
L E L + + + Y+ LI+ +C L ++ ++ K FP T Y
Sbjct: 795 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT-YN 853
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
L+ K ++ + F E + D + +I Y Q A +FN
Sbjct: 854 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 908
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 13/228 (5%)
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A L M + K N + F L +++ G + R L +M +R++ + TY +
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
+ + + +F M ++ C TY+ L + + K++ + E +K EM
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSK---GCFPDVVTYNTLITGFCKSK---RVEDGMKLFCEMT 876
Query: 281 PR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAID 335
+ D Y+ LI YC L+ +V+ ++ P +Y +LL L I+
Sbjct: 877 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 936
Query: 336 ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
E+ + D+ ++II+ + D +EA +F + ++
Sbjct: 937 KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 984
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 101/242 (41%), Gaps = 11/242 (4%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ + Y++ L++C+C+ AL++ KM +L + + V F +L + + +
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK---CRWTTYSNLA 257
LV M + + + Y + +G + E+ NE E K TY+ L
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCK----NGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 258 SIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTF 314
+ + + A L+ + + P D + LI ++ NLD ++ +++S+
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINP-DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P N +Y ++ L + K+ F+ S+ ++ + +I + + M +E
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 375 IF 376
+F
Sbjct: 338 LF 339
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 127/312 (40%), Gaps = 18/312 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLT---AKTNGIAAAEKYFNGLSE 139
VR L G R AL ++ K + D A L ++ +A A++ F+ +
Sbjct: 9 VRRLSAAGEVRSALALLA--RGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPR 66
Query: 140 YA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N T+ AL++ Y E+ LALFEKM N +N L + R G+ E+
Sbjct: 67 LGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFER 126
Query: 198 VRPLVNQMKQRNISLDNLTY---IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
R L +M + I+ + ++Y I + Y + D E+ + T++
Sbjct: 127 ARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDAT----QLLELMRREGIRPSVVTFN 182
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLDAVNRVWGILKS 312
L Y KA A L M A Y+ LI+ +C ++ NR + +K
Sbjct: 183 LLVDGYGKAGKMSNA-LHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKE 241
Query: 313 -TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
PT +Y +L+ A A+ N +D + F E D+R V++ A + ++
Sbjct: 242 RGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKD 301
Query: 372 AALIFNNAKKRA 383
A +F + ++
Sbjct: 302 ARKLFQSIGEKG 313
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 63 ALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
ALN + ME K +R +++ Y + L +GR+ A ++ M RK++ F+ +D
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 120 LTAKTNGIAAAEKYFNGLSEYAKNR--YTYGALLNCYCKELMTERALALFEKMDELKFLG 177
K + AEK ++ + + + + TY +L+N +C + A +FE M
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ V+++ L + + + ++ L +M QR + + +TY +Q D D + +F
Sbjct: 395 DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIF 454
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYC 295
EM ++ TY+ L K EKA + + L+ +M+P Y+ +I C
Sbjct: 455 KEMVSDGVPP-NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT-IYTYNIMIEGMC 512
Query: 296 NTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ D + + P +Y ++ + + + F+E + + +
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 355 LADVIIRAYLQKDMYEEAA 373
+ +IRA L+ E +A
Sbjct: 573 CYNTLIRARLRDGDREASA 591
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 159/395 (40%), Gaps = 23/395 (5%)
Query: 100 EWMESRKMHFSYTDFAVYLDLTAKTNG----IAAAEKYFN-GLSEYAKNRYTYGALLNCY 154
E ++SR S +F+ L AK N I+ E+ N G+ N YTY L+NC+
Sbjct: 71 EMVKSRPFP-SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPH---NHYTYSILINCF 126
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
C+ ALA+ KM +L + N V ++L Y + + LV+QM +
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 215 LTYIVWMQS-YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELAL 273
+T+ + + H + V + + C+ TY + + K + A + L
Sbjct: 187 VTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPD--LVTYGVVVNGLCKRGDTDLAFILL 244
Query: 274 KKLEEMKPRDRK-AYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKL 331
K+E+ K Y +I C ++ DA+N + P +Y L+ L
Sbjct: 245 NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 332 NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK 391
+ + R + D+ +I A++++ EA +++ KR+ +
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS--IV 362
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVD-GAEE 450
+ S + + +LD A E +S+ H P V+ T + F + K VD G E
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSK----HCFPDVVSYSTLIKGFCKAKRVDEGMEL 418
Query: 451 FCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
F ++ + + Y+ LI+ AG DM Q
Sbjct: 419 FREMSQRGLVGNTVTYTTLIQGLFQAGD--CDMAQ 451
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 103/235 (43%), Gaps = 9/235 (3%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +++ CK + AL LF++M+ N V +++L + G+ L++ M
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
+R I+ D T+ + ++ + E+++ EM D TYS+L + + +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP-SIVTYSSLINGFCMHDRL 377
Query: 267 EKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-SY 321
++A+ + E M + D +Y LI +C +D ++ + NT +Y
Sbjct: 378 DEAK---QMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
L+Q L + D+ ++ F+E S ++ + ++ + E+A ++F
Sbjct: 435 TTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 120/299 (40%), Gaps = 11/299 (3%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
++ K ++ + + E M++ M ++ +++ ++ + + + A + + Y
Sbjct: 90 AIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP 149
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T +LLN YC A+AL ++M + NTV FN L + + L+
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALI 209
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED---KCRWTTYSNLASI 259
++M + D +TY V + D D + + + N+ E + Y+ +
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTD----LAFILLNKMEQGKLEPGVLIYTTIIDG 265
Query: 260 YVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPT 317
K + + A K++E R + Y LIS CN +R+ +++ P
Sbjct: 266 LCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++ L+ A K + ++ ++E R + +I + D +EA +F
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAK 142
L K G+ A+ V E+++ KM + + + ++ K + F LS
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y +++ +C++ E A ALF++M E L N+ +N L LR G E L+
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Query: 203 NQMKQRNISLDNLT 216
+M+ + D T
Sbjct: 595 KEMRSCGFAGDAST 608
>gi|255660948|gb|ACU25643.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 484
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + + A FE M + + + + +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNFMIWGFFLSGKVDTANRFFEXMKSREIMPDVITYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ ID R+ EM + TY
Sbjct: 200 KMEEXENYFMEMKGRNIEPTVVTYTTLIKGYVSVDRIDDALRLVEEMKGFGINP-NAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
S L AE +A+ LK++ + + P+D + LIS C NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEAQSILKEMVDKYIAPKDNSIFLRLISGQCKVGNLDAAADVLKVMI 318
Query: 312 STFPPTNTS-YLVLLQALAKLNAID 335
PT Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENCCKAGQYD 343
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 15/286 (5%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGA 149
Y ALE+++ ME ++ + L + A N AE YFN + + + N + Y +
Sbjct: 222 YSKALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYSS 281
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
LLN Y + ++A L + M + N V L +Y+R G EK R L+ +++
Sbjct: 282 LLNAYSADGDYKKADMLVQDMKSAGLVPNKVILTTLLKVYVRGGLFEKSRELLAELEDLG 341
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ D + Y + M + I + +F EM + + K YS + S + ++ L ++A
Sbjct: 342 YAEDEMPYCLLMDGLAKSRRILEAKSIFEEM-KKKQVKSDGYCYSIMISAFCRSGLLKEA 400
Query: 270 ELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILK--STFPPTNTSYLVL-- 324
+ + E + D + ++ YC +++V ++ + + P NT ++++
Sbjct: 401 KQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELAISPDWNTFHILIKY 460
Query: 325 -----LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
L LA D+ + + E CSS L IRA+ Q
Sbjct: 461 FCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHLGK--IRAHSQ 504
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 135/308 (43%), Gaps = 9/308 (2%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT-NGIAA 129
G ++ L +R K R++ ++ +WM+ + +++ ++ Y+ K+ N I A
Sbjct: 96 GDMLKVQDLNVILRHFGKLCRWQDLSQLFDWMQKHE-KITFSSYSTYIKFMGKSLNPIKA 154
Query: 130 AEKYFNGLSEYAKNRYTY-GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
E Y + E +N + ++L+C + E +L LF +M + + V ++ L
Sbjct: 155 LEIYNSIQDESVRNNVSVCNSVLSCLIRNGKFENSLKLFHQMKQDGLRPDAVTYSTLLAG 214
Query: 189 YLRLGQP-EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
+++ K LV +M++ + +D++ Y + + N E F +M +E
Sbjct: 215 CMKVKHGYSKALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLP 274
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNR 305
+ YS+L + Y ++KA++ ++ ++ + P ++ L+ +Y +
Sbjct: 275 NVFH-YSSLLNAYSADGDYKKADMLVQDMKSAGLVP-NKVILTTLLKVYVRGGLFEKSRE 332
Query: 306 VWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL 364
+ L+ + Y +L+ LAK I K FEE + + D ++I A+
Sbjct: 333 LLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVKSDGYCYSIMISAFC 392
Query: 365 QKDMYEEA 372
+ + +EA
Sbjct: 393 RSGLLKEA 400
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 130/288 (45%), Gaps = 14/288 (4%)
Query: 66 AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF-AVYLDLTA 122
A I++ + V+ +YC V+S+ + ++ ALEV EW+ R H A L +
Sbjct: 144 ADILDARPVQMTPTDYCFVVKSVGQ-ESWQRALEVFEWLNLRHWHSPNARMVAAILGVLG 202
Query: 123 KTNGIAAAEKYFNGLSEYAKNRY-TYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ N + A + F +R Y A++ Y + +A L + M + + + ++
Sbjct: 203 RWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLIS 262
Query: 182 FNNLSTMYLRLG--QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
FN L L+ G P V L++ ++ + D +TY + + S ++++G +VF +
Sbjct: 263 FNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFED 322
Query: 240 M-CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCN 296
M + C+ W TY+ + S+Y + L +AE +LE P D Y+ L+ +
Sbjct: 323 MEAHRCQPDL-W-TYNAMISVYGRCGLAAEAERLFIELELKGFSP-DAVTYNSLLYAFAR 379
Query: 297 TSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
N + V V+ + K F +Y ++ K +D+ Q +++
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 100/241 (41%), Gaps = 4/241 (1%)
Query: 96 LEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLNC 153
+E+++ + + + + L ++ + + A K F + + + +TY A+++
Sbjct: 282 VELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISV 341
Query: 154 YCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
Y + + A LF +++ F + V +N+L + R EKV+ + QM++ D
Sbjct: 342 YGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD 401
Query: 214 NLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL-FEKAELA 272
+TY + Y +D +++ +M TY+ L KA E A L
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALM 461
Query: 273 LKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKL 331
+ L+ + Y LI Y + + +L+S P N +Y V+L L +
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 332 N 332
N
Sbjct: 522 N 522
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 109/266 (40%), Gaps = 6/266 (2%)
Query: 65 NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
N + +G + + + + +L GR V+E ++ S + + LD A+
Sbjct: 811 NTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARA 870
Query: 125 NGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
I K ++ + + Y Y ++ CK A + +M+E F +
Sbjct: 871 GNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N++ MY + +K + ++K+ + D TY + Y + + +M N
Sbjct: 931 NSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRN 990
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLD 301
D + TY +L S + K + E+AE ++L + DR YH ++ + ++ +
Sbjct: 991 LGLDP-KLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 302 AVNRVWGILKSTF--PPTNTSYLVLL 325
++ ++K+ P T +L+++
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMV 1075
>gi|359484961|ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 609
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTY 147
G +E+++ M++ K+ S F ++ AK G+ AA K ++ L + TY
Sbjct: 344 GLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTY 403
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+++N YC+ + +A +F +M++ F VA++++ MY + G+ + LV +MK+
Sbjct: 404 ASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKE 463
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAEL 265
R + Y M + + ++ VE+++ EM + D+ +Y+++ S Y KA
Sbjct: 464 RGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDR---VSYTSVISAYSKAGD 520
Query: 266 FE 267
FE
Sbjct: 521 FE 522
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/349 (18%), Positives = 135/349 (38%), Gaps = 46/349 (13%)
Query: 88 KFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--K 142
K Y + + + ESRK+ FS + + + K A ++F +++ +
Sbjct: 234 KIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILE 293
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y +L+ + + A LF + +E K L + F L MY+ G E+ +V
Sbjct: 294 DSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTIEIV 353
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASIYV 261
MK I + + + + ++ + +V+ E+ CE TY+++ ++Y
Sbjct: 354 KAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPG--QVTYASIINVYC 411
Query: 262 KAELFEKAELALKKLE--------------------------------EMKPRDRK---- 285
+ EL+ KAE+ ++E +MK R K
Sbjct: 412 RMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVW 471
Query: 286 AYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
Y+ L+ ++ NL V ++W +K P SY ++ A +K + + + E+
Sbjct: 472 VYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEF 531
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA-SARFFKS 392
D +A +++ + + +E + + K R ++S
Sbjct: 532 RMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRS 580
>gi|297808589|ref|XP_002872178.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318015|gb|EFH48437.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 137 LSEYAK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
+ E AK N T G ++ YC+E L +M E++ N V FN+L ++ +
Sbjct: 246 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 305
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
+ + ++ MK+ N+ D +TY M ++S ++ +VF EM + K YS
Sbjct: 306 DGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV-KAGVKPDAHAYSI 364
Query: 256 LASIYVKAELFEKAELALKKL-EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
LA YV+A+ +KAE L+ L E +P + + +IS +C++ ++D RV+
Sbjct: 365 LAKGYVRAKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSSGSMDDAMRVF 416
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP------- 195
N T+ L+ +CK+ E A + KM+E +TV +N ++T Y++ G+
Sbjct: 181 NIRTFNVLVQAWCKKKKVEEAWEVVHKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 240
Query: 196 -------EKVRP-----------------------LVNQMKQRNISLDNLTYIVWMQSYS 225
EK +P V +MK+ + + + + + +
Sbjct: 241 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 300
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRD 283
+ D DG++ V M EC K TYS + + + A EKA K++ + +KP D
Sbjct: 301 EVMDRDGIDEVLTLM-KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP-D 358
Query: 284 RKAYHFLISLY 294
AY L Y
Sbjct: 359 AHAYSILAKGY 369
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 31/198 (15%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN----GLSEYAK--- 142
G+ + ALE+ + M+ KM LD + NG+ + +N GL K
Sbjct: 473 GKLKDALEMFKAMQKSKMD---------LDASRPFNGVEPDVQTYNILISGLINEGKFLE 523
Query: 143 ---------------NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
N TY +++N CK+ + A +F+ M F + V FN L +
Sbjct: 524 AEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVS 583
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
Y + G+ + L +M +R I D +TYI + + + +I+G +F EM +
Sbjct: 584 GYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYP 643
Query: 248 CRWTTYSNLASIYVKAEL 265
T S L ++ K EL
Sbjct: 644 DTITIRSMLTVLWSKEEL 661
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 9/175 (5%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFL-GNTVAFNNLSTMYLRLGQPEKVRPL 201
N+ TYG +++ CK T AL L KM+E+ + N V ++ + + G+ L
Sbjct: 212 NQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNL 271
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+M+++ I D TY + + +R+ EM E + TYS L + YV
Sbjct: 272 YTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML-ERKINPNVVTYSALINAYV 330
Query: 262 KAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
K F +AE + +EM PR + Y+ +I +C + LDA ++ ++ +
Sbjct: 331 KERKFFEAE---ELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMAT 382
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 137/343 (39%), Gaps = 17/343 (4%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY-C-VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G + A N Y M+ K + D+ Y C + GR+ A +++ M RK++ + +
Sbjct: 263 GRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTY 322
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDE 172
+ ++ K AE+ ++ + N TY ++++ +CK+ + A +F M
Sbjct: 323 SALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMAT 382
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ FN L Y + + L+++M + + D TY + + + D++
Sbjct: 383 KGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNA 442
Query: 233 VERVFYEMCNE--CEDKCRWTT----YSNLASIYVKAELFEKAELALKKLEEMKP----- 281
+ +M + C D T + + E+F+ + + L+ +P
Sbjct: 443 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVE 502
Query: 282 RDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
D + Y+ LIS N L+A + P +Y ++ L K + +D Q
Sbjct: 503 PDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQM 562
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
F+ S+ S D+ + ++ Y + ++ +F +R
Sbjct: 563 FDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRG 605
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/410 (20%), Positives = 165/410 (40%), Gaps = 24/410 (5%)
Query: 5 NQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGAT-----GGS 59
NQ + R+ T+++R F +G+ + L +++S +T GG
Sbjct: 78 NQHGFVKDPERKQRRHSGGDGRTINKR-GGVVGFRSGDANDLVEKVSTNCSTKWLSYGGC 136
Query: 60 VTGALNAY-----IMEGKTVRKDMLEYCVRS--LRKFGRYRHALEVIEWMESRKMH-FSY 111
+ L A + E + ++ L RS L++ + ALE+ EW++ + + +
Sbjct: 137 IPSILRALETVKDLDEALSPWEESLSNKERSIILKEQSCWERALEIFEWLKKKGCYELNV 196
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTYGALLNCYCKELMTERALALFEK 169
+ + L + K E ++ + TYG L++ Y K +TE AL ++
Sbjct: 197 IHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLTEEALHWLDR 256
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL-----VNQMKQRNISLDNLTYIVWMQSY 224
M++ + V + Y + G+ +K + Q ++ L + TY + +Y
Sbjct: 257 MNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYTYNTLIDTY 316
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRD 283
+ F M E T++ + I E+A ++K+EE++ P D
Sbjct: 317 GKAGQLREASDTFAWMLREGIIP-NTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPD 375
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
+ Y+ LISL+ +N+D + +K + P SY LL A + + + +
Sbjct: 376 TRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVS 435
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKS 392
E + R D + R Y++ M +++ L F N S+ + +
Sbjct: 436 EMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYSA 485
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 130/328 (39%), Gaps = 53/328 (16%)
Query: 101 WMESRKMHF----SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK-NRYTYGALLNCYC 155
W+ R+ H S ++ +D + I AEK F E K + + ++ Y
Sbjct: 466 WLWFRRFHLEGNMSSECYSANIDAYGERGHILEAEKAFLCCKESRKLSVLEFNVMIKAYG 525
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
E+A L + M+ L + ++N+L + P K + + +M++ + D +
Sbjct: 526 ISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCI 585
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
Y + S+ L ++ E +F EM
Sbjct: 586 PYCAVISSFIKLGQLEMAEGLFKEMIG--------------------------------- 612
Query: 276 LEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAI 334
++P D Y LI+ + + N+ +AVN V + + P Y L++ K+ +
Sbjct: 613 -YNVQP-DVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYL 670
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANAS-------- 386
+ ++ ++ ++ D+ ++ +I Y ++ M ++A IF + K++ +A+
Sbjct: 671 EEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKGDANEFSFAMML 730
Query: 387 ---ARFFKSRESFMIYYLRSRQLDLALN 411
R K +E+F I + R+L L +
Sbjct: 731 CMYKRIGKLKEAFQIVQ-KMRELGLVTD 757
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 99/224 (44%), Gaps = 13/224 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G V+ D++ Y + + G R A+ + + + + + + + L K
Sbjct: 610 MIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGY 669
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A++ + L SE + Y+ +++ Y + M ++A +FE + K N +F
Sbjct: 670 LEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKR-KGDANEFSFAM 728
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ MY R+G+ ++ +V +M++ + D L+Y + Y+ F EM
Sbjct: 729 MLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAA 788
Query: 245 --EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA 286
D C T+ +L + VK + ++ A+ KLE + +D ++
Sbjct: 789 IQPDDC---TFKSLGVVLVKCGIPKQ---AVGKLEMTRKKDPQS 826
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 109/273 (39%), Gaps = 13/273 (4%)
Query: 67 YIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
Y ME K +R D + Y + L GR+ A ++ M RK+ + F +D K
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 125 NGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
+ A + + N +TY +L+N +C A +F+ M + V +
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N L T + + + E L +M + + D TY + Y ++ ++VF M
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV- 386
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD 301
+C TY+ L EKA + ++ L++ + D Y+ +I C T D
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT---D 443
Query: 302 AVNRVWGILKS----TFPPTNTSYLVLLQALAK 330
+ W + +S P +Y+ ++ L +
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 91/235 (38%), Gaps = 5/235 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T G+LLN +C+ + A++L + MD F+ N V +N + + + M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK-AE 264
+++ I D +TY + S+ R+ +M D ++ L +VK
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP-NVIFFTALIDTFVKEGN 269
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL--KSTFPPTNTSYL 322
L E L + + + Y+ LI+ +C L ++ ++ K FP T Y
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT-YN 328
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
L+ K ++ + F E + D + +I Y Q A +FN
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 13/228 (5%)
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A L M + K N + F L +++ G + R L +M +R++ + TY +
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
+ + + +F M ++ C TY+ L + + K++ + E +K EM
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSK---GCFPDVVTYNTLITGFCKSK---RVEDGMKLFCEMT 351
Query: 281 PR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAID 335
+ D Y+ LI YC L+ +V+ ++ P +Y +LL L I+
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Query: 336 ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
E+ + D+ ++II+ + D +EA +F + ++
Sbjct: 412 KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 125/290 (43%), Gaps = 9/290 (3%)
Query: 94 HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTYGALL 151
H L ++ M +H ++ F++ + AK + A F+ + + N TYG ++
Sbjct: 359 HGL--LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
CK E A+ FE+M + + + +N+L + +K + L+ +M R I
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
LD + + + S+ + E++F ++ K TYS L Y A ++A
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPNIITYSTLIDGYCLAGKMDEATK 535
Query: 272 ALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQAL 328
L + MKP D Y+ LI+ YC S + DA+ + S P +Y ++LQ L
Sbjct: 536 LLASMVSVGMKP-DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+ K+ + + ++ ++I+ + ++ +EA +F N
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 97/238 (40%), Gaps = 5/238 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY ++++ YC + A+ +KM + V +N+L + G+ + R +
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ M +R + + TY +Q Y+ + + + M + +S L Y K
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY-VFSILICAYAK 386
Query: 263 AELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNT 319
++A L K+ + + P D Y +I + C + + DA+ ++ P N
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNP-DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
Y L+ +L + D K+ E R D + II ++ ++ E+ +F+
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 115/292 (39%), Gaps = 13/292 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ SL F ++ A E+I M R + F +D K + +EK F+ +
Sbjct: 451 IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY L++ YC + A L M + + V +N L Y ++ + E
Sbjct: 511 KPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M+ +S D +TY + +Q + ++ + E + +TY+ +
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI-TESGTQLELSTYNIILHGL 629
Query: 261 VKAELFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-F 314
K L ++A L L L+ + + ++ +I D ++ L +
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQ----LETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
P +Y ++ + L + ++ L F E + + R+ + I+R LQ+
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 9/247 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKM--DELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N ++Y LL C E ++ AL L + M D + V++ + + + G +K
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
++M R I + +TY + + +D V M N CR TY+++
Sbjct: 221 TYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR--TYNSIVHG 278
Query: 260 YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPP 316
Y + ++A LKK+ + ++P D Y+ L+ C +++ + K P
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEP-DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
T+Y LLQ A A+ + + + + ++I AY ++ ++A L+F
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 377 NNAKKRA 383
+ +++
Sbjct: 398 SKMRQQG 404
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 14/225 (6%)
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
L+N Y K A A FE M N ++ NL Y V +M+
Sbjct: 198 LVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEG 257
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW----TTYSNLASIYVKAEL 265
+S + TY V + Y L D++ ER F +E W Y+N+ Y KA
Sbjct: 258 VSPNAATYSVIISGYGRLGDVEAAERWFQRALSE-----NWHHNDVIYNNIIHAYCKAGN 312
Query: 266 FEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWGILK----STFPPTNTS 320
E+AE + +EE Y+ L+ Y + +D V+ LK + PT S
Sbjct: 313 MERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVS 372
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
Y L+ +KL +D Q E E + ++ + +II Y+Q
Sbjct: 373 YGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQ 417
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 117/293 (39%), Gaps = 43/293 (14%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN-GLSE-YAKNRYTYGAL 150
R A+ +E ME+ + + ++V + + + AAE++F LSE + N Y +
Sbjct: 244 RGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNI 303
Query: 151 LNCYCKELMTERALALFEKMDELKF---LG------------------------------ 177
++ YCK ERA A+ M+E LG
Sbjct: 304 IHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTE 363
Query: 178 -----NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
V++ L +Y +LG+ +K + N+M+ + I + TY + + Y L D
Sbjct: 364 TGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTAN 423
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLI 291
VF +M N K TY+ L + + K +A L ++E P + Y +I
Sbjct: 424 AFSVFEDMSN-AGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIII 482
Query: 292 SLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
+ +L A V + + F P+ +Y V++ LA+ +D +E
Sbjct: 483 DGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDE 535
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 4/229 (1%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N TY +++ Y + E A F++ + N V +NN+ Y + G E+
Sbjct: 259 SPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEA 318
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT--TYSNLAS 258
++ M+++ + Y + M Y H +D VF + E T +Y L +
Sbjct: 319 IMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLIN 378
Query: 259 IYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPP 316
+Y K +KA ++E+ + +RK Y +I Y + +A + + + P
Sbjct: 379 LYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKP 438
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
+Y +L+ A K ++ + ES +R +II +++
Sbjct: 439 DGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMK 487
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 165/393 (41%), Gaps = 28/393 (7%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
++G V+ +++ Y + S+ K A ++ M S+ + ++ +
Sbjct: 216 VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGK 275
Query: 127 IAAAEKYFNG--LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A FN L + YT+ L+N +CK+ + +F+ M + N V +N+
Sbjct: 276 LNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--N 242
L Y + + K + + N M Q ++ D +Y + + + + D +F EM N
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTS 298
D TYS+L K+ + AL+ +++M P + Y+ ++ C
Sbjct: 396 IIPD---VVTYSSLIDGLSKS---GRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIH 449
Query: 299 NLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
+D A+ + + P +Y +L++ L + ++ ++ FE + + ++
Sbjct: 450 QVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYT 509
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAAL 417
++I+ + + ++ EA + +K N K+ E ++ + + D+A E L
Sbjct: 510 IMIQGFCVEGLFNEALALL--SKMEDNGCIPDAKTYEIIILSLFKKDENDMA----EKLL 563
Query: 418 SEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE 450
E RP Q+ + +F+++K+ D + E
Sbjct: 564 REMIARGVRPRQIAI-----WFQKKKEYDVSSE 591
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 107/278 (38%), Gaps = 38/278 (13%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
++ +YG L++ CK T AL L +++D N V +N + ++ + L
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE----------------CED 246
++M + IS D +TY + + L ++ +F +M E C+D
Sbjct: 249 SEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308
Query: 247 ------------------KCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKA 286
K + TY++L Y + KA+ + + + P D ++
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP-DIQS 367
Query: 287 YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
Y +I+ +C D A+N + + P +Y L+ L+K I Q ++
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
R +R + I+ A + ++A + K +
Sbjct: 428 DRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 70/308 (22%), Positives = 121/308 (39%), Gaps = 45/308 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ +CK + A+ L +M E+ T + L ++ + L +M
Sbjct: 1222 TYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEM 1281
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT--YSNLASIYVKA 263
+ + D TY ++ ID F EM E CR T +N+ + KA
Sbjct: 1282 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQRE---GCRPDTVFMNNMINFLGKA 1338
Query: 264 -------ELFEKAE------------LALKKLEEMKPRDRK------------------A 286
+LF++ E +K L E K R +
Sbjct: 1339 GRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 1398
Query: 287 YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
Y LI +C T+ ++ A+ + + + FPP +Y L+ AL K D+ + F+E +
Sbjct: 1399 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 1458
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQ 405
C S R+ V+I+ + ++A +F+ K A + + + M R+
Sbjct: 1459 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVY--AYNALMSGLARTGM 1516
Query: 406 LDLALNEM 413
LD AL+ M
Sbjct: 1517 LDEALSTM 1524
Score = 46.6 bits (109), Expect = 0.027, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 81 YC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS 138
YC + +L K RY A E+ + ++ S +AV + K + A F+ ++
Sbjct: 1434 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMN 1493
Query: 139 EY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+ A + Y Y AL++ + M + AL+ +M E + + ++N + + G P
Sbjct: 1494 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 1553
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+ +++ MKQ + D ++Y + + SH + ++ EM
Sbjct: 1554 RAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 1597
Score = 46.6 bits (109), Expect = 0.028, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 121/283 (42%), Gaps = 8/283 (2%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA-AEKYFNGLSE--YAK 142
L K GR A+++ + ME+ + S + + ++ A+ +F + E +
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ +TY L++ +CK E+A+ L E+MDE F A+ +L + + + L
Sbjct: 1395 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 1454
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++K+ S Y V ++ +D +F EM N+ Y+ L S +
Sbjct: 1455 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM-NKLGCAPDVYAYNALMSGLAR 1513
Query: 263 AELFEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNT 319
+ ++A +++++E P D +Y+ +++ T A+ + + +ST P
Sbjct: 1514 TGMLDEALSTMRRMQEHGCIP-DINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVV 1572
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
SY +L AL+ + + +E + YD+ I+ A
Sbjct: 1573 SYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEA 1615
Score = 45.1 bits (105), Expect = 0.073, Method: Composition-based stats.
Identities = 74/330 (22%), Positives = 134/330 (40%), Gaps = 20/330 (6%)
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL-DNLTY 217
M +A+ +F ++ K A+N++ M + GQ EKV L N+M D +TY
Sbjct: 1164 MVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTY 1223
Query: 218 IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE 277
+ ++ L D ++ EM E + Y+ L +++ K F A AL E
Sbjct: 1224 SALISAFCKLGRRDSAIQLLNEM-KEIGMQPTTKIYTMLIALFFK---FNDAHGALSLFE 1279
Query: 278 EMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYL-VLLQALAKLN 332
EM+ + D Y LI +D + ++ +T ++ ++ L K
Sbjct: 1280 EMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAG 1339
Query: 333 AIDILKQCFEEWES-RCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK 391
+D + F+E E+ RC + +I + K E F K+ + + F
Sbjct: 1340 RLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY 1399
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
S + + ++ +++ A+ +E E + + P + + K D A E
Sbjct: 1400 S--ILIDGFCKTNRMEKAMMLLE----EMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 1453
Query: 452 CKVLKSLNCLDFSA--YSLLIKTYIAAGKL 479
+ LK NC SA Y+++IK AG+L
Sbjct: 1454 FQELKE-NCGSSSARVYAVMIKHLGKAGRL 1482
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 15/284 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + + D+ Y V L K G AL +++ ME K+ + + +D K
Sbjct: 212 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKH 271
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A FN + + +TY +L++C C A L M E K N V FN+
Sbjct: 272 MDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNS 331
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-E 243
L + + G+ + L ++M QR+I + +TY + + + +D +++F M + +
Sbjct: 332 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 391
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSN 299
C TY+ L + KA ++ E ++ EM R + Y+ LI +
Sbjct: 392 CLPDV--VTYNTLIKGFCKA---KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446
Query: 300 LDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
D +++ ++ PP +Y +LL L K ++ FE
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 490
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 125/297 (42%), Gaps = 7/297 (2%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
++ K ++ + + E M++ + ++ +++ L+ + + + A + + Y
Sbjct: 90 AIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEP 149
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ T +LLN YC A+AL ++M E+ + +TV FN L + + L+
Sbjct: 150 DIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALI 209
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++M R D TY + DID + +M + + + Y+ + K
Sbjct: 210 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEANVVIYNTIIDGLCK 268
Query: 263 AELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
+ + A K+E +KP D Y+ LIS CN +R+ +++ P
Sbjct: 269 YKHMDDAFDLFNKMETKGIKP-DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++ L+ A AK + ++ F+E R ++ + +I + D +EA IF
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 69 MEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M V D++ Y + L K+G+ AL V E+++ KM + + + ++ K
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516
Query: 127 IAAAEKYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ F LS N Y +++ +C++ + E A ALF +M E L ++ +N
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 576
Query: 185 LSTMYLRLGQPEKVRPLVNQMK 206
L LR G L+ +M+
Sbjct: 577 LIRARLRDGDKAASAELIKEMR 598
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 144/360 (40%), Gaps = 35/360 (9%)
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
EL + A+ALF +M + + + + F+ L + ++ + + V L QM+ I ++ T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y + + + + + V +M + T S+L + Y + +A + ++
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEP-DIVTLSSLLNGYCHGKRISEAVALVDQM 177
Query: 277 EEM--KPRDRKAYHFLI-SLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNA 333
EM KP D ++ LI L+ + +AV + ++ P +Y ++ L K
Sbjct: 178 VEMGYKP-DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF-FKS 392
ID+ ++ E ++ + + II + ++A +FN + + F + S
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296
Query: 393 RESFMIYYLRSRQLDLALNEM---------------------EAALSEAK-------QFH 424
S + Y R L++M E L EA+ Q
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356
Query: 425 WRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKLASDM 483
P VT ++ F +D A++ ++ S +CL D Y+ LIK + A ++ M
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGM 416
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 137/303 (45%), Gaps = 7/303 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ S K G + +L ++ ME ++ ++ ++L+ K + A F L S
Sbjct: 176 ITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGI 235
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y +++N + K + A L +M E+ L +TV+++ L ++Y+ + +
Sbjct: 236 TPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALS 295
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ +M + N SLD +T + + Y L+ + +R+F+ M + + +Y+ L +Y
Sbjct: 296 VFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSM-RKMGIEPNVVSYNTLLKVY 354
Query: 261 VKAELFEKAELALKKLEEMKPRDRKA--YHFLISLYCNT-SNLDAVNRVWGILKSTFPPT 317
+AELF +A + L +L + K ++ Y+ +I +Y + + A N V + K P
Sbjct: 355 GEAELFGEA-IHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPN 413
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y ++ K +D F++ S D L +I AY + + A + +
Sbjct: 414 AITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLH 473
Query: 378 NAK 380
+ K
Sbjct: 474 DLK 476
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 138/320 (43%), Gaps = 18/320 (5%)
Query: 75 RKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKY 133
R+ + + V + + ++ +L +++W+ E + S + V L + A
Sbjct: 97 RQLSIRFMVSLISQEADWQRSLALLDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGL 156
Query: 134 FNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLR 191
F+ + + A +RYTY L+ + K M + +L ++M++ + G+ V ++NL + +
Sbjct: 157 FDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRK 216
Query: 192 LGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC 248
L K + ++K+ I+ D + +Y+ + ++ G R+F E + +E +
Sbjct: 217 LCDYSKAISIFMRLKRSGITPD-------LVAYNSMINVFGKARLFREARMLVHEMREVG 269
Query: 249 RW---TTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVN 304
+YS L S+YV+ E F +A ++ E D + +I +Y + +
Sbjct: 270 VLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEAD 329
Query: 305 RV-WGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
R+ W + K P SY LL+ + F + + ++ + +I+ Y
Sbjct: 330 RLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIY 389
Query: 364 LQKDMYEEAALIFNNAKKRA 383
+ +E+A + +KR
Sbjct: 390 GKSLEHEKATNLVQEMQKRG 409
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 125/305 (40%), Gaps = 11/305 (3%)
Query: 77 DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG 136
DML VR + G A++V+E M + T + ++ K + A ++ N
Sbjct: 289 DML---VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNN 345
Query: 137 LSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ Y + + +Y +L C+ E A L ++M N V FN + + G
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
E+ L+ QM + ++ +TY + + +D +FY M C K TY+
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM--PC--KPNTITYT 461
Query: 255 NLASIYVKAE-LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKS 312
L + AE L AEL + L++ + ++ L+S +C +D A+ V +++
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y LL + K + + S S D+ II ++D EEA
Sbjct: 522 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 373 ALIFN 377
+F+
Sbjct: 582 IKMFH 586
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/320 (16%), Positives = 120/320 (37%), Gaps = 43/320 (13%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA---------- 141
+ A+EV++ M ++ + + V ++ + + A ++ N LS Y
Sbjct: 196 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 255
Query: 142 ---------------------------KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
N T+ L+ +C+ M ERA+ + E+M
Sbjct: 256 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
NT N + + G+ + +N M S D ++Y ++ + +
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375
Query: 235 RVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLIS 292
+ EM + C T++ I + L E+A + ++++ E + Y+ L++
Sbjct: 376 ELLKEMVRKNCPPN--EVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 433
Query: 293 LYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
+C +D+ ++ + P +Y LL L +D + E + + +
Sbjct: 434 GFCVQGRVDSALELFYSMPCK--PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 491
Query: 353 MRLADVIIRAYLQKDMYEEA 372
+ +V++ + QK + +EA
Sbjct: 492 VVTFNVLVSFFCQKGLMDEA 511
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 93/238 (39%), Gaps = 13/238 (5%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL CK +A+ + ++M N V +N + R G+ + R +N++
Sbjct: 182 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 241
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVKA 263
D ++Y ++ + VE +F EM E C T+ L + +
Sbjct: 242 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM---MEKNCMPNEVTFDMLVRFFCRG 298
Query: 264 ELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+ E+ A++ LE+M A + +I+ C +D + + S P
Sbjct: 299 GMVER---AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY +L+ L + + K+ +E + + + I QK + E+A ++
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLI 413
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 67/386 (17%), Positives = 144/386 (37%), Gaps = 22/386 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+R L GR AL +++ M R S + V L+ K+ G A + + +
Sbjct: 152 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY ++N C+E + A ++ F +TV++ + + E V
Sbjct: 212 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 271
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M ++N + +T+ + ++ + ++ +V +M C T L +I
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH---GCAANT--TLCNIV 326
Query: 261 VKAELFE-KAELALKKLEEMK----PRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTF 314
+ + + + A + L M D +Y ++ C DA + +++
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
PP ++ + L + I+ E+ ++ + ++ + + + A
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+F + + N + + + + +LD A L+E Q P VT +
Sbjct: 447 LFYSMPCKPNTI-----TYTTLLTGLCNAERLDAA----AELLAEMLQKDCAPNVVTFNV 497
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNC 460
FF ++ +D A E + + C
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGC 523
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 98/253 (38%), Gaps = 16/253 (6%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A + Y L+ C+ T A + + + A+N L Y R GQ + R
Sbjct: 75 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 134
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASI 259
L+ M ++ D TY ++ + + +M + C+ TY+ L
Sbjct: 135 LIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPS--VVTYTVLLEA 189
Query: 260 YVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TF 314
K+ F + A++ L+EM+ + + Y+ +I+ C +D L S F
Sbjct: 190 VCKSTGFGQ---AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGF 246
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEE-WESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P SY +L+ L + +++ F E E C ++ D+++R + + M E A
Sbjct: 247 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF-DMLVRFFCRGGMVERAI 305
Query: 374 LIFNNAKKRANAS 386
+ A+
Sbjct: 306 QVLEQMSGHGCAA 318
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 63/309 (20%)
Query: 10 ISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIM 69
I T S ++ CS+ + +QR+ ++ L +++S T +G +NA +
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLL---------QEMLVRKISPDVVT---FSGLINALVK 234
Query: 70 EGK-TVRKDMLEYCVRS---------------LRKFGRYRHALEVIEWMESRKMHFSYTD 113
EG +D+L+ + S L G+ + ALE+ + M+ M
Sbjct: 235 EGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD----- 289
Query: 114 FAVYLDLTAKTNGIAAAEKYFN----GLSEYAK------------------NRYTYGALL 151
+D T NG+ + +N GL K + TY +++
Sbjct: 290 ----IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMI 345
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
N CK+ + A +F+ M F N V FN L T Y + G + L +M +R I
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
+ +TYI ++ + + +I+G +F EM + T + L ++ K EL +
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL----KK 461
Query: 272 ALKKLEEMK 280
AL LEE++
Sbjct: 462 ALAMLEELQ 470
>gi|356525958|ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Glycine max]
Length = 630
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 33/304 (10%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGA 149
Y ALE+I+ ++ K+ + + + A AE YFN + + + N Y Y +
Sbjct: 192 YAKALELIQELQHNKLQMDGVIYGTIMAVCASNTKWEEAEYYFNQMKDEGHTPNVYHYSS 251
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
L+N Y ++A L + M + N V L +Y++ G EK R L+ ++K
Sbjct: 252 LINAYSACGNYKKADMLIQDMKSEGLVPNKVILTTLLKVYVKGGLFEKSRELLAELKSLG 311
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN--LASIYVKAELFE 267
+ D + Y ++M + I + +F EM ++ R Y++ + S + +A+LF
Sbjct: 312 YAEDEMPYCIFMDGLAKAGQIHEAKLIFDEM---MKNHVRSDGYAHSIMISAFCRAKLFR 368
Query: 268 KAELALKKLEEMKPRDRKAYHFLI--SLYCNTSNLDAVNRVWGILK-----STFPPTNTS 320
+A+ K E + Y +I S+ C + + RV LK + P NT
Sbjct: 369 EAKQLAKDFETTSNK----YDLVILNSMLCAFCRVGEMERVMETLKKMDELAINPGYNTF 424
Query: 321 YLVL-------LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
++++ + LA D+ + + E CSS L V + Y EA
Sbjct: 425 HILIKYFCREKMYLLAYRTMKDMHSKGHQPVEELCSSLISHLGQV--------NAYSEAF 476
Query: 374 LIFN 377
++N
Sbjct: 477 SVYN 480
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 121/293 (41%), Gaps = 10/293 (3%)
Query: 87 RKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA--EKYFNGLSEYAK-N 143
+K ++ H ++ WM+ ++ Y+ A N AA + Y + ++ AK N
Sbjct: 81 KKSNKFNHISQLFSWMQENN-KLDALSYSHYIRFMASHNLDAAKMLQLYHSIQNQSAKIN 139
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP-EKVRPLV 202
++L+C K+ AL LF++M L + V + L +++ K L+
Sbjct: 140 VLVCNSVLSCLIKKAKFNSALNLFQQMKLDGLLPDLVTYTTLLAGCIKIENGYAKALELI 199
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+++ + +D + Y M + + E F +M +E + YS+L + Y
Sbjct: 200 QELQHNKLQMDGVIYGTIMAVCASNTKWEEAEYYFNQMKDEGHTPNVY-HYSSLINAYSA 258
Query: 263 AELFEKAELALK--KLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNT 319
++KA++ ++ K E + P ++ L+ +Y + + LKS +
Sbjct: 259 CGNYKKADMLIQDMKSEGLVP-NKVILTTLLKVYVKGGLFEKSRELLAELKSLGYAEDEM 317
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
Y + + LAK I K F+E D ++I A+ + ++ EA
Sbjct: 318 PYCIFMDGLAKAGQIHEAKLIFDEMMKNHVRSDGYAHSIMISAFCRAKLFREA 370
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 151/343 (44%), Gaps = 29/343 (8%)
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
L++ ++ A+ +F + E + + L RL + + L++++++
Sbjct: 49 LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ D++ + + ++S + ++F +M EC K +T++ L + + +
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKM-KECGCKPTTSTFNTLIKGF---GIVGRP 164
Query: 270 ELALKKLEEM------KPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYL 322
A+K LE M KP +R Y+ LI +C + L+ A N + ++ S P +Y
Sbjct: 165 HEAMKLLEMMIQDGNVKPNER-TYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYN 223
Query: 323 VLLQALAKLNAID-----ILKQCFEEWESRCSSYDMRLADVIIRAYLQK-DMYEEAALIF 376
L +A A+ D ILK +++ ++ + R +IIR Y ++ +M E ++
Sbjct: 224 TLARAFAQNGETDNAERLILK--MQQYNNKVKPNE-RTCGIIIRGYCKEGNMTEALRFLY 280
Query: 377 NNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
+ + + F S + YL D +E AL+ ++F +P VT T
Sbjct: 281 KMKELGVHPNPVVFNS---LIKGYLDITDTD----GVEEALTLMEEFGIKPDVVTYSTIM 333
Query: 437 RFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIAAGK 478
+ +D EE F ++K+ D AYS+L K Y+ AG+
Sbjct: 334 NAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQ 376
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T G ++ YCKE AL KM EL N V FN+L YL + + V +
Sbjct: 255 NERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEAL 314
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M++ I D +TY M ++S +D E +F +M + E + YS LA YV+
Sbjct: 315 TLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMV-KAEIEPDIQAYSILAKGYVR 373
Query: 263 AELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
A +KAE L + + + + + +IS +C +D R++ + P N
Sbjct: 374 AGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLN 430
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 119/279 (42%), Gaps = 19/279 (6%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
+ A++N + A+ +F KM E T FN L + +G+P + L+ M
Sbjct: 116 FNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMI 175
Query: 207 QR-NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
Q N+ + TY + +Q++ N+++ V ++M N + TY+ LA + +
Sbjct: 176 QDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGM-QPDIVTYNTLARAFAQNGE 234
Query: 266 FEKAELALKKLEE----MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTS 320
+ AE + K+++ +KP +R +I YC N+ +A+ ++ + + P
Sbjct: 235 TDNAERLILKMQQYNNKVKPNERTC-GIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVV 293
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
+ L++ + D +++ E D+ I+ A+ + + IF++
Sbjct: 294 FNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMV 353
Query: 381 KRANASARFFKSRESFMIY---YLRSRQLDLA---LNEM 413
K A +++ I Y+R+ Q D A LN M
Sbjct: 354 K-----AEIEPDIQAYSILAKGYVRAGQPDKAEALLNSM 387
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 11/202 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV----YLDLTAKTNGIAAAEKYFNGLS 138
+R K G AL + M+ +H + F YLD+T T+G+ E+ +
Sbjct: 263 IRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDIT-DTDGV---EEALTLME 318
Query: 139 EYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
E+ + TY ++N + + + +F+ M + + + A++ L+ Y+R GQP+
Sbjct: 319 EFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPD 378
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
K L+N M + + + + + + + +D R YE NE TY L
Sbjct: 379 KAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALR-LYEKMNEMGTPLNLKTYETL 437
Query: 257 ASIYVKAELFEKAELALKKLEE 278
Y +A+ KAE L +EE
Sbjct: 438 IWGYGEAKQPWKAEELLVTMEE 459
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 63/309 (20%)
Query: 10 ISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIM 69
I T S ++ CS+ + +QR+ ++ L +++S T +G +NA +
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLL---------QEMLVRKISPDVVT---FSGLINALVK 234
Query: 70 EGK-TVRKDMLEYCVRS---------------LRKFGRYRHALEVIEWMESRKMHFSYTD 113
EG +D+L+ + S L G+ + ALE+ + M+ M
Sbjct: 235 EGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD----- 289
Query: 114 FAVYLDLTAKTNGIAAAEKYFN----GLSEYAK------------------NRYTYGALL 151
+D T NG+ + +N GL K + TY +++
Sbjct: 290 ----IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMI 345
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
N CK+ + A +F+ M F N V FN L T Y + G + L +M +R I
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
+ +TYI ++ + + +I+G +F EM + T + L ++ K EL +
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL----KR 461
Query: 272 ALKKLEEMK 280
AL LEE++
Sbjct: 462 ALAMLEELQ 470
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 7/251 (2%)
Query: 136 GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
++ A + TY L++ YC+ E A+ L +M+ + L +N + G+
Sbjct: 277 AMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKM 336
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
++V L+N+M +R + D++T + +Y D+ +V M E + TY
Sbjct: 337 KEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMM-ESGLQLDQFTYKA 395
Query: 256 LASIYVKAELFEKAELALKKLEEMKPRDRKAYHFL---ISLYCNTSNLDAVNRVWG-ILK 311
L + KA+ ++A+ AL E M Y L + CN +N AV + ++K
Sbjct: 396 LVHGFCKAKELDEAKEAL--FEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMK 453
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
FPP Y L++ L K ID+ F E + + D + + AYL
Sbjct: 454 RGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVA 513
Query: 372 AALIFNNAKKR 382
A I N K+
Sbjct: 514 ALDILNEMAKK 524
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 87/220 (39%), Gaps = 8/220 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTY 147
R AL V + M +R++ + L AK+ A A K F+ ++ A N + Y
Sbjct: 124 ARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVY 183
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
A+L+ K A +L +MD + +FN + +Y R G + + +M+
Sbjct: 184 NAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMEN 243
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYE--MCNECEDKCRWTTYSNLASIYVKAEL 265
+ + D +T+ + + ++ E M D TY+ L Y +A
Sbjct: 244 QGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDH---VTYTTLVDGYCRAGD 300
Query: 266 FEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVN 304
E+A ++E M A Y+ ++ C + VN
Sbjct: 301 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVN 340
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 125/290 (43%), Gaps = 9/290 (3%)
Query: 94 HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTYGALL 151
H L ++ M +H ++ F++ + AK + A F+ + + N TYG ++
Sbjct: 359 HGL--LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
CK E A+ FE+M + + + +N+L + +K + L+ +M R I
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
LD + + + S+ + E++F ++ K TYS L Y A ++A
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 272 ALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQAL 328
L + MKP D Y+ LI+ YC S + DA+ + S P +Y ++LQ L
Sbjct: 536 LLASMVSVGMKP-DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+ K+ + + ++ ++I+ + ++ +EA +F N
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 97/238 (40%), Gaps = 5/238 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY ++++ YC + A+ +KM + V +N+L + G+ + R +
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ M +R + + TY +Q Y+ + + + M + +S L Y K
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY-VFSILICAYAK 386
Query: 263 AELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNT 319
++A L K+ + + P D Y +I + C + + DA+ ++ P N
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNP-DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
Y L+ +L + D K+ E R D + II ++ ++ E+ +F+
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 9/247 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKM--DELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N ++Y LL C E ++ AL L + M D + V++ + + + G +K
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
++M R I + +TY + + +D V M N CR TY+++
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR--TYNSIVHG 278
Query: 260 YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPP 316
Y + ++A LKK+ + ++P D Y+ L+ C +++ + K P
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEP-DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
T+Y LLQ A A+ + + + + ++I AY ++ ++A L+F
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 377 NNAKKRA 383
+ +++
Sbjct: 398 SKMRQQG 404
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 115/292 (39%), Gaps = 13/292 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ SL F ++ A E+I M R + F +D K + +EK F+ +
Sbjct: 451 IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY L++ YC + A L M + + V +N L Y ++ + E
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M+ +S D +TY + +Q + ++ + E + +TY+ +
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI-TESGTQLELSTYNIILHGL 629
Query: 261 VKAELFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-F 314
K L ++A L L L+ + + ++ +I D ++ L +
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQ----LETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
P +Y ++ + L + ++ L F E + + R+ + I+R LQ+
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 75/204 (36%), Gaps = 3/204 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ CK ++A+ + M + + N +N++ Y GQP++ +
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY-V 261
+M + D +TY M ++F M K TTY L Y
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYAT 351
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTS 320
K L E L + + + LI Y +D V+ ++ P +
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 321 YLVLLQALAKLNAIDILKQCFEEW 344
Y ++ L K ++ + FE+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQM 435
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 132/308 (42%), Gaps = 14/308 (4%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
L Y V++L + G+++ ALEV EW+ A L + + AA + F L
Sbjct: 144 LVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESL 203
Query: 138 SE---YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ Y+ + Y Y +L++ + + + LFE M GN V +N + +Y + G
Sbjct: 204 KQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGD 263
Query: 195 P-EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNECEDKCRWT 251
++++ L +MK IS D+ TY + + + R+F EM C ++
Sbjct: 264 SWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNR---V 320
Query: 252 TYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWG 308
TY+ L +Y K + ++A L ++E + P + Y+ LI+ Y D A
Sbjct: 321 TYNALLDVYGKGGMHKEASELLVEMEAAGISP-NIVTYNELIAAYARAGLCDEAAALKKS 379
Query: 309 ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDM 368
+L P +Y L+ A + + + F E + ++ +++I Y + +
Sbjct: 380 LLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEK 439
Query: 369 YEEAALIF 376
++ +F
Sbjct: 440 LDDMMKVF 447
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 3/195 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
NR TY ALL+ Y K M + A L +M+ N V +N L Y R G ++ L
Sbjct: 318 NRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALK 377
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ + + D TY + +++ + F EM + TY+ L IY +
Sbjct: 378 KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGR 436
Query: 263 AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTS 320
E + K ++E D ++ L+ + N L V+ V+ +K + + P +
Sbjct: 437 MEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDT 496
Query: 321 YLVLLQALAKLNAID 335
+ +L++ + +D
Sbjct: 497 FNILIECYGRCGYVD 511
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 127 IAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
+A + Y NG S K + A+++ K ERA+ L E++ + + + V +N L
Sbjct: 621 LALNQLYDNGHSPDIK---VFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLM 677
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+MY R G K ++++M++ + + +TY + SY+ +D RVF +M
Sbjct: 678 SMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM 731
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Query: 60 VTGALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
V ALN + ME K +R +++ Y + L +GR+ A +++ M +K++ + F
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 259
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+D K AEK + + + + + +TY +L+N +C ++A +FE M
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 319
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ +N L + + + E L +M R + D +TY +Q H D D +
Sbjct: 320 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 379
Query: 235 RVFYEMCNE 243
+VF +M ++
Sbjct: 380 KVFKQMVSD 388
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 17/243 (6%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TYG ++N CK + A L KM+ K + V FN + + + L
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207
Query: 203 NQMKQRNISLDNLTY---IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+M+ + I + +TY I + SY +D ++ +M E + T++ L
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSD---ASQLLSDMI-EKKINPNLVTFNALIDA 263
Query: 260 YVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGIL--KST 313
+VK F +AE K ++M R D Y+ LI+ +C LD +++ + K
Sbjct: 264 FVKEGKFVEAE---KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
FP +T Y L++ K ++ + F E R D +I+ + A
Sbjct: 321 FPDLDT-YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 379
Query: 374 LIF 376
+F
Sbjct: 380 KVF 382
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
Query: 69 MEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M V D++ Y + L G+ ALEV ++M+ ++ D +Y T G
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL---DIYIY---TTMIEG 438
Query: 127 IAAAEKYFNG--------LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
+ A K +G L N TY +++ C + + + A AL +KM E L +
Sbjct: 439 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 498
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+ +N L +LR G L+ +M+
Sbjct: 499 SGTYNTLIRAHLRDGDKAASAELIREMRS 527
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 96/242 (39%), Gaps = 9/242 (3%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + T +LLN YC A+AL ++M E+ + +T+ F L + +
Sbjct: 75 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 134
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
LV++M QR + +TY V + DID + + + N+ E +I
Sbjct: 135 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID----LAFNLLNKMEAAKIEADVVIFNTI 190
Query: 260 YVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNL-DAVNRVWGILKSTF 314
+ + AL +EM+ + + Y LIS C+ DA + +++
Sbjct: 191 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 250
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P ++ L+ A K ++ ++ R D+ + +I + D ++A
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 310
Query: 375 IF 376
+F
Sbjct: 311 MF 312
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 127/302 (42%), Gaps = 46/302 (15%)
Query: 70 EGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
+ K ++ D++ Y V+ L G HAL+V+ M H + + ++ K I
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414
Query: 128 AAAEKYFNG--LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
+ A N + Y + +T+ L++ YCK L + AL L E+M E +T+ +N++
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC- 244
+ G+ +V +M + + +TY + ++++ N ++ +V +M E
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534
Query: 245 -EDKCRWTTY-------SNLASIYVKAELFEKAE-------------------------L 271
D + T +L Y+ LF+K E +
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYL---LFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 591
Query: 272 ALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQ 326
A K +EM + +A Y LI C T+N+D A + ++K F P+ +++ ++
Sbjct: 592 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 651
Query: 327 AL 328
+L
Sbjct: 652 SL 653
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 132/332 (39%), Gaps = 28/332 (8%)
Query: 63 ALNAYIMEGKTVRKDM------LEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
L A ++ GK +++ M +R L + GR A+ +++ M + ++ D
Sbjct: 205 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRA----YAVPDVVT 260
Query: 117 YLDLT---AKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMD 171
Y L K + A Y + + +TY +++ YCK M + A L +
Sbjct: 261 YNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAV 320
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
F+ + V + +L G E+ L N+ + + I D + Y ++ I
Sbjct: 321 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 380
Query: 232 GVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKK--LEEMKPRDRKAYH 288
+V EM E C + TY+ + + K A + + ++ P D ++
Sbjct: 381 HALQVMNEMAEEGCHPDIQ--TYNIVINGLCKMGNISDATVVMNDAIMKGYLP-DVFTFN 437
Query: 289 FLISLYCNTSNLDA----VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
LI YC LD+ V R+W + P +Y +L L K ++ + + F+E
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMW---EYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 494
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ + +++I + + + EEA+ +
Sbjct: 495 ILKGCHPNPITYNILIENFCRSNKMEEASKVI 526
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 90/221 (40%), Gaps = 6/221 (2%)
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
T A LF++M N AFN + + G + L+ ++ QR +S++ TY +
Sbjct: 170 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--E 277
W++ + R+ M TY+ L K + ++A L+++ +
Sbjct: 230 WIRGLCEAGRLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 287
Query: 278 EMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDI 336
P D Y+ +I YC S + +A + + F P +Y L+ L ++
Sbjct: 288 GCLPDDF-TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 346
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ F E +++ D+ + + +++ + + A + N
Sbjct: 347 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 387
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 125/305 (40%), Gaps = 11/305 (3%)
Query: 77 DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG 136
DML VR + G A++V+E M + T + ++ K + A ++ N
Sbjct: 320 DML---VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNN 376
Query: 137 LSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ Y + + +Y +L C+ E A L ++M N V FN + + G
Sbjct: 377 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 436
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
E+ L+ QM + ++ +TY + + +D +FY M C K TY+
Sbjct: 437 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM--PC--KPNTITYT 492
Query: 255 NLASIYVKAE-LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKS 312
L + AE L AEL + L++ + ++ L+S +C +D A+ V +++
Sbjct: 493 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 552
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y LL + K + + S S D+ II ++D EEA
Sbjct: 553 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 612
Query: 373 ALIFN 377
+F+
Sbjct: 613 IKMFH 617
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/320 (16%), Positives = 120/320 (37%), Gaps = 43/320 (13%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA---------- 141
+ A+EV++ M ++ + + V ++ + + A ++ N LS Y
Sbjct: 227 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 286
Query: 142 ---------------------------KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
N T+ L+ +C+ M ERA+ + E+M
Sbjct: 287 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 346
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
NT N + + G+ + +N M S D ++Y ++ + +
Sbjct: 347 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 406
Query: 235 RVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLIS 292
+ EM + C T++ I + L E+A + ++++ E + Y+ L++
Sbjct: 407 ELLKEMVRKNCPPN--EVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 464
Query: 293 LYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
+C +D+ ++ + P +Y LL L +D + E + + +
Sbjct: 465 GFCVQGRVDSALELFYSMPCK--PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 522
Query: 353 MRLADVIIRAYLQKDMYEEA 372
+ +V++ + QK + +EA
Sbjct: 523 VVTFNVLVSFFCQKGLMDEA 542
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 93/238 (39%), Gaps = 13/238 (5%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL CK +A+ + ++M N V +N + R G+ + R +N++
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVKA 263
D ++Y ++ + VE +F EM E C T+ L + +
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM---MEKNCMPNEVTFDMLVRFFCRG 329
Query: 264 ELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+ E+ A++ LE+M A + +I+ C +D + + S P
Sbjct: 330 GMVER---AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 386
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY +L+ L + + K+ +E + + + I QK + E+A ++
Sbjct: 387 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLI 444
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 67/386 (17%), Positives = 144/386 (37%), Gaps = 22/386 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+R L GR AL +++ M R S + V L+ K+ G A + + +
Sbjct: 183 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 242
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY ++N C+E + A ++ F +TV++ + + E V
Sbjct: 243 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 302
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M ++N + +T+ + ++ + ++ +V +M C T L +I
Sbjct: 303 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH---GCAANT--TLCNIV 357
Query: 261 VKAELFE-KAELALKKLEEMK----PRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTF 314
+ + + + A + L M D +Y ++ C DA + +++
Sbjct: 358 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 417
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
PP ++ + L + I+ E+ ++ + ++ + + + A
Sbjct: 418 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 477
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+F + + N + + + + +LD A L+E Q P VT +
Sbjct: 478 LFYSMPCKPNT-----ITYTTLLTGLCNAERLDAAAE----LLAEMLQKDCAPNVVTFNV 528
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNC 460
FF ++ +D A E + + C
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGC 554
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 98/253 (38%), Gaps = 16/253 (6%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A + Y L+ C+ T A + + + A+N L Y R GQ + R
Sbjct: 106 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 165
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASI 259
L+ M ++ D TY ++ + + +M + C+ TY+ L
Sbjct: 166 LIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPS--VVTYTVLLEA 220
Query: 260 YVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TF 314
K+ F + A++ L+EM+ + + Y+ +I+ C +D L S F
Sbjct: 221 VCKSTGFGQ---AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGF 277
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEE-WESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P SY +L+ L + +++ F E E C ++ D+++R + + M E A
Sbjct: 278 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF-DMLVRFFCRGGMVERAI 336
Query: 374 LIFNNAKKRANAS 386
+ A+
Sbjct: 337 QVLEQMSGHGCAA 349
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 9/320 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME D++ + V +L K GR A ++++ M + + + + + + N
Sbjct: 360 MEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANR 419
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A F+ + YTY L++ + K +AL FEKM N VA N
Sbjct: 420 LDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNA 479
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-E 243
+G+ + + + N++K ++ D++TY + M+ YS + +D ++ EM +
Sbjct: 480 SLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ 539
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD- 301
CE ++L KA E+A ++EEM Y+ L++ +
Sbjct: 540 CEPDV--IVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQK 597
Query: 302 AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
AV + P ++ LL L K + +D+ + F + + D+ + II
Sbjct: 598 AVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIH 657
Query: 362 AYLQKDMYEEAALIFNNAKK 381
+++++ + A +F+ KK
Sbjct: 658 GFIKQNQIKNAIWLFHQMKK 677
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 175/445 (39%), Gaps = 62/445 (13%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ +L K GR A ++ ME + + + + L K I A + F ++ +
Sbjct: 551 IDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGC 610
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N T+ LL+C CK + AL +F KM + + + FN + +++ Q +
Sbjct: 611 SPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIW 670
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV----FYEMCNECEDKCRWTTYSNL 256
L +QMK+ + D++T + I+ R+ FY++ + D+ W +
Sbjct: 671 LFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNI-DRSFWEDV--M 726
Query: 257 ASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-- 313
I +A EKA L ++L +D +I + C V+ +K T
Sbjct: 727 GGILTEAGT-EKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVF--VKFTKE 783
Query: 314 --FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK----- 366
PT Y +L+ +++ +++ FEE +S + D + +I A+ +
Sbjct: 784 LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843
Query: 367 --DMYEEA--------ALIFNNAKKRANASARFFKSRESFMIYY---------------- 400
D+Y+E + +N S R K+ + +YY
Sbjct: 844 LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMD---LYYNLVSGDFSPTPCTFGP 900
Query: 401 -----LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCK-V 454
L+S +LD A +EM + + RP + + + VD A EF K +
Sbjct: 901 LIDGLLKSGRLDDA-HEMFDGMV---HYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRM 956
Query: 455 LKSLNCLDFSAYSLLIKTYIAAGKL 479
+K D +Y++L+ AG++
Sbjct: 957 VKEGIRPDLKSYTILVDILCIAGRV 981
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 158/401 (39%), Gaps = 30/401 (7%)
Query: 63 ALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTA 122
LNAY G ++ + ++S G + ALEV M S + S F+ + +
Sbjct: 191 VLNAYSYNG------LIHFLLQS----GFCKEALEVYRRMVSEGLKPSLKTFSALMVASG 240
Query: 123 KTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
K I + N YTY + ++ + A + ++MD+ + V
Sbjct: 241 KRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVV 300
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+ L + + L +MK + D +TY+ + +S +D VE+++ EM
Sbjct: 301 TYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM 360
Query: 241 CNECEDKCR-WTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYC 295
E + T++ L + KA + A L+ M+ + + Y+ LIS
Sbjct: 361 --EADGYAPDVVTFTILVNALCKAGRINE---AFDLLDTMRKQGVLPNLHTYNTLISGLL 415
Query: 296 NTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ LD ++ ++S PT +Y++L+ K + FE+ ++R + ++
Sbjct: 416 RANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIV 475
Query: 355 LADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEME 414
+ + + + EA +FN K A + M Y + Q+D A+
Sbjct: 476 ACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSV--TYNMMMKCYSKVGQVDEAIK--- 530
Query: 415 AALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA-EEFCKV 454
LSE + P + +++ + V+ A + FC++
Sbjct: 531 -LLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM 570
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 98/240 (40%), Gaps = 3/240 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y L++ + + E A LFE+M +T +N+L + + G+ ++ L ++M
Sbjct: 792 VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEM 851
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
R + +TY + + + N +D ++Y + + + T+ L +K+
Sbjct: 852 LTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSG-DFSPTPCTFGPLIDGLLKSGR 910
Query: 266 FEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLV 323
+ A + R A Y+ L++ Y ++D + ++K P SY +
Sbjct: 911 LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
L+ L +D FE+ + D+ +++I + EEA +F+ + R
Sbjct: 971 LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 125/290 (43%), Gaps = 9/290 (3%)
Query: 94 HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTYGALL 151
H L ++ M +H ++ F++ + AK + A F+ + + N TYG ++
Sbjct: 359 HGL--LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
CK E A+ FE+M + + + +N+L + +K + L+ +M R I
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
LD + + + S+ + E++F ++ K TYS L Y A ++A
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 272 ALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQAL 328
L + MKP D Y+ LI+ YC S + DA+ + S P +Y ++LQ L
Sbjct: 536 LLASMVSVGMKP-DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+ K+ + + ++ ++I+ + ++ +EA +F N
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 97/238 (40%), Gaps = 5/238 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY ++++ YC + A+ +KM + V +N+L + G+ + R +
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ M +R + + TY +Q Y+ + + + M + +S L Y K
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY-VFSILICAYAK 386
Query: 263 AELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNT 319
++A L K+ + + P D Y +I + C + + DA+ ++ P N
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNP-DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
Y L+ +L + D K+ E R D + II ++ ++ E+ +F+
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFD 503
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 115/292 (39%), Gaps = 13/292 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ SL F ++ A E+I M R + F +D K + +EK F+ +
Sbjct: 451 IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY L++ YC + A L M + + V +N L Y ++ + E
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M+ +S D +TY + +Q + ++ + E + +TY+ +
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI-TESGTQLELSTYNIILHGL 629
Query: 261 VKAELFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-F 314
K L ++A L L L+ + + ++ +I D ++ L +
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQ----LETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
P +Y ++ + L + ++ L F E + + R+ + I+R LQ+
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
>gi|356536919|ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Glycine max]
Length = 716
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 12/225 (5%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK-----NR 144
GR + ++E M S D Y + + + A ++ L+E + N
Sbjct: 361 GRVSDTVRMLEAMRRLDDKGSQPDHVSYTTVVSALVKVGAMDRARQVLAEMTRIGVPANL 420
Query: 145 YTYGALLNCYCKELMTERALALFEKM-DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY LL YCK+L ++A L ++M D+ + V++N L + + N
Sbjct: 421 ITYNVLLKGYCKQLQIDKARELLKEMVDDAGIQPDVVSYNILIDGCILVDDSAGALSFFN 480
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+M+ R I+ ++Y M+++++ RVF EM ++ K ++ L Y +
Sbjct: 481 EMRARGIAPTKISYTTLMKAFAYSGQPKLAHRVFNEMDSDPRVKVDLIAWNMLVEGYCRL 540
Query: 264 ELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG 308
L E+A+ ++K++E +H + Y + +N A+ R G
Sbjct: 541 GLVEEAKKVVQKMKE------SGFHPDVGTYGSLANGIALARKPG 579
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 173/447 (38%), Gaps = 65/447 (14%)
Query: 83 VRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE-- 139
++ L + G++ ALEV WM +S AV L + + + + + F L E
Sbjct: 53 MKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEG 112
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP-EKV 198
Y + Y Y +L++ + + AL FE+M E + V +N + +Y + G+ E +
Sbjct: 113 YPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENI 172
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNECEDKCRWTTYSNL 256
L +MK + I D TY + + + + + +F +M N D+ TY+ L
Sbjct: 173 LELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDR---VTYNAL 229
Query: 257 ASIYVKAELFEKAELALKKLE----------------------------EMKPR------ 282
+Y KA + +A LK++E EMK
Sbjct: 230 LDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGI 289
Query: 283 --DRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQ 339
D Y L+S Y ++ ++ ++ S P + ++ L+ K +
Sbjct: 290 EPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMV 349
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY 399
FE+ ++ D+ + ++ A+ + MY E +F KK A F + +F I
Sbjct: 350 IFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKK-----AGFEPDKATFNIL 404
Query: 400 ---YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLK 456
Y R D AL+ + L Q P T +T E + AE +L
Sbjct: 405 IEAYGRCGSSDQALSIYDGML----QAGCTPDLATFNTLLAALAREGRWEHAE---LILD 457
Query: 457 SLNCLDFS----AYSLLIKTYIAAGKL 479
LN + AY+ ++ Y G+L
Sbjct: 458 ELNRSSYKPNDIAYASMLHAYANGGEL 484
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 6/223 (2%)
Query: 97 EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCY 154
E+++ + + + F+ ++ + +K + + AE F + Y + T+ A+++ Y
Sbjct: 489 EMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMY 548
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
K+ M ++A F + + V +N L MY R G K + + + D
Sbjct: 549 GKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDL 608
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
++Y + SYS + R+F+EM + + TY+ YV +F +A +K
Sbjct: 609 VSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSF-TYNTFVGCYVNGGMFPEALSVVK 667
Query: 275 KLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP 315
+ + KP D Y L+ YC + V R+ +KS+ P
Sbjct: 668 HMHKTGCKP-DEVTYRTLVDAYCKIGKFEEVERILKFIKSSDP 709
>gi|26449475|dbj|BAC41864.1| unknown protein [Arabidopsis thaliana]
gi|29028966|gb|AAO64862.1| At5g25630 [Arabidopsis thaliana]
Length = 574
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 137 LSEYAK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
+ E AK N T G ++ YC+E L +M E++ N V FN+L ++ +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
+ + ++ MK+ N+ D +TY M ++S ++ +VF EM + K YS
Sbjct: 312 DGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV-KAGVKPDAHAYSI 370
Query: 256 LASIYVKAELFEKAELALKKL-EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
LA YV+A+ +KAE L+ L E +P + + +IS +C+ ++D RV+
Sbjct: 371 LAKGYVRAKGPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVF 422
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Query: 60 VTGALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
V ALN + ME K +R +++ Y + L +GR+ A +++ M +K++ + F
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+D K AEK + + + + + +TY +L+N +C ++A +FE M
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ +N L + + + E L +M R + D +TY +Q H D D +
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 235 RVFYEMCNE 243
+VF +M ++
Sbjct: 381 KVFKQMVSD 389
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 127/315 (40%), Gaps = 12/315 (3%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N YTY L+NC+C+ ALAL KM +L + + V ++L Y +
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 101
Query: 201 LVNQMKQRNISLDNLTYIVWMQS-YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
LV+QM + D +T+ + + H + V V + C+ TY + +
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP--NLVTYGVVVNG 159
Query: 260 YVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
K + A L K+E K D ++ +I C ++ DA+N + P
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y L+ L Q + + + ++ + +I A++++ + EA + +
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
+ KR+ F + S + + +LD A E +S+ P T +T +
Sbjct: 280 DMIKRSIDPDIF--TYNSLINGFCMHDRLDKAKQMFEFMVSK----DCFPDLDTYNTLIK 333
Query: 438 FFEEEKDV-DGAEEF 451
F + K V DG E F
Sbjct: 334 GFCKSKRVEDGTELF 348
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 16/148 (10%)
Query: 69 MEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M V D++ Y + L G+ ALEV ++M+ ++ D +Y T G
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL---DIYIY---TTMIEG 439
Query: 127 IAAAEKYFNG--------LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
+ A K +G L N TY +++ C + + + A AL +KM E L +
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
+ +N L +LR G L+ +M+
Sbjct: 500 SGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 137/363 (37%), Gaps = 50/363 (13%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + T +LLN YC A+AL ++M E+ + +T+ F L + +
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
LV++M QR + +TY V + DID + + + N+ E +I
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID----LAFNLLNKMEAAKIEADVVIFNTI 191
Query: 260 YVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNL-DAVNRVWGILKSTF 314
+ + AL +EM+ + + Y LIS C+ DA + +++
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P ++ L+ A K F E E +L D +I+ + D++ +L
Sbjct: 252 NPNLVTFNALIDAFVKEGK-------FVEAE--------KLHDDMIKRSIDPDIFTYNSL 296
Query: 375 I----FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFH-----W 425
I ++ +A F S++ F LD N + ++K+ +
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCF-------PDLD-TYNTLIKGFCKSKRVEDGTELF 348
Query: 426 RPMQ--------VTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAA 476
R M VT T + + D D A++ K + S D YS+L+
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 477 GKL 479
GKL
Sbjct: 409 GKL 411
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDLWVLLIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSEYAK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE + R+T+ ++ + E A FE M + + + V +N + Y R+
Sbjct: 140 KMLSEGNEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMIXGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L A+ +A LK++ E + P D + LIS C +LDA V ++
Sbjct: 259 STLLPGLCNAQKMSEARSILKEMVEKYITPTDNSIFLRLISGQCKAGDLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAGQYD 343
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 8/275 (2%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ + ++ +++ Y + L G+ A+++ + M + + + ++ K
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 127 IAAAEKYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A K F+ +S E N T+ +++ YCKE M E +L M + L N +N
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L R + + L+N+M+ + + D +TY + + + E++ EM N
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN-L 477
Query: 245 EDKCRWTTYSNLASIY-VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAV 303
K TY+ L Y ++ +L + + +E K + Y+ LI YC + L+A
Sbjct: 478 GLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAA 537
Query: 304 NRVWG-ILKSTFPPTNTSY-LVLLQALAKLNAIDI 336
N + +L+ P T+Y +V L+ L K + DI
Sbjct: 538 NGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDI 572
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 124/298 (41%), Gaps = 15/298 (5%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G AL++ ME R + S +++ +D K + A FN + +
Sbjct: 221 KSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVV 280
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y +++ C + + + +M + N V F+ L ++++ G+ + + L N+M
Sbjct: 281 AYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEM 340
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAE 264
R I+ D +TY + + N + ++ M ++ CE TYS L + Y KA+
Sbjct: 341 VARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPN--IVTYSILINSYCKAK 398
Query: 265 LFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTN 318
+ E++ K L D Y+ L+ +C + L+ ++ ++ PP+
Sbjct: 399 RVDNGMRLFCEISSKGL----VADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSV 454
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y +LL L + + FE+ + + + ++II ++A +F
Sbjct: 455 VTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLF 512
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 116/298 (38%), Gaps = 5/298 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
GR A+ +++ M K + ++ + A + + +Y N TY
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITY 212
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
G +LN CK T AL LF KM+E + V ++ + + G + L N+M+
Sbjct: 213 GPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEM 272
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK-AELF 266
+ I D + Y + + D ++ EM T+S L ++VK +L
Sbjct: 273 KGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR-NIIPNVVTFSALIDVFVKEGKLL 331
Query: 267 EKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLL 325
E EL + + D Y LI +C + L N++ ++ S P +Y +L+
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ K +D + F E S+ D + +++ + Q A +F R
Sbjct: 392 NSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 101/262 (38%), Gaps = 41/262 (15%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G+ A E+ M +R + ++ +D K N + A + + + N
Sbjct: 326 KEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIV 385
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L+N YCK + + LF ++ + +TV +N L + + G+ + L +M
Sbjct: 386 TYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEM 445
Query: 206 KQRNISLDNLTYIVW-------------------MQSYSHLNDIDGVERVFYEMCNECED 246
R + +TY + MQ + I + + MCN +
Sbjct: 446 VSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKV 505
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
W+ + +L+ ++ +KP D Y+ +I C +L + +
Sbjct: 506 DDAWSLFCSLS------------------VKGVKP-DVLTYNVMIGGLCKKGSLSEADML 546
Query: 307 WGILK-STFPPTNTSYLVLLQA 327
+ +K P++ +Y +L++A
Sbjct: 547 FRKMKEDGCAPSDCTYNILIRA 568
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 173/427 (40%), Gaps = 34/427 (7%)
Query: 69 MEGKTVRKDM--LEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + ++ D+ L +++L + + R A+ ++E M S + T F + +
Sbjct: 186 MTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGS 245
Query: 127 IAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I AA + + E + R T L+N YCK E AL +K F + V +N
Sbjct: 246 IEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNT 305
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ G +++ M Q D TY + S ++D + + +M +
Sbjct: 306 FVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR- 364
Query: 245 EDKC--RWTTYSNLASIYVKAELFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNT 297
C TT++ L E+A EL +K L D ++ LI+ C
Sbjct: 365 --GCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSP----DVYTFNILINALCKV 418
Query: 298 SNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKL----NAIDILKQCFEEWESRCSSYD 352
+ R++ +KS+ P +Y +L+ L + NA+D+LK E ES
Sbjct: 419 GDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLK----EMESNGCPRS 474
Query: 353 MRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNE 412
+ II A ++ EEA +F+ + A+ +R + + + +++++D A
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFD--QMDAHGISRSAVTFNTLIDGLCKAKRIDDATEL 532
Query: 413 MEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIK 471
+E + E Q P +T ++ + ++ D+ A + + + + +D Y LI
Sbjct: 533 IEQMVKEGLQ----PSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLIN 588
Query: 472 TYIAAGK 478
AG+
Sbjct: 589 GLCKAGR 595
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 19/259 (7%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA-----EKYFNGL 137
+ +L K G + + E M+S + + +D + A E NG
Sbjct: 412 INALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGC 471
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
++ TY +++ CK++ E A +F++MD + V FN L + + +
Sbjct: 472 P---RSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDD 528
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNL 256
L+ QM + + N+TY + Y D+ + M N E TY L
Sbjct: 529 ATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE--IDVVTYGTL 586
Query: 257 ASIYVKAELFEKAELALKKLEEMKPRD----RKAYHFLISLYCNTSNL-DAVNRVWGILK 311
+ KA + ++ALK L M+ + KAY+ +I +NL DA++ + +
Sbjct: 587 INGLCKA---GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTE 643
Query: 312 STFPPTNTSYLVLLQALAK 330
PP +Y ++ + L +
Sbjct: 644 VGEPPDALTYKIVFRGLCR 662
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 9/307 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ L K G R A+ ++ M + + + +D K + A F+ +
Sbjct: 186 IHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGI 245
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N TY ++++ CK + L +M + K + N V F L + G
Sbjct: 246 SPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHD 305
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASI 259
+V+ M QR + D +TY M + +++D ++VF M + C +YS L +
Sbjct: 306 VVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV--ISYSTLING 363
Query: 260 YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPP 316
Y K + +KA +++ E+ P + Y+ LI C+ L DA+ ++ S P
Sbjct: 364 YCKIQRIDKAMYLFEEMCQRELVP-NIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIP 422
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y +LL L K +D + E + D++ +++I + E A +F
Sbjct: 423 DLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLF 482
Query: 377 NNAKKRA 383
++ +
Sbjct: 483 SSLSSKG 489
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 118/310 (38%), Gaps = 7/310 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N TYG L++ CK + A+ L M + N + +N + + Q +
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+ ++M + IS + TY + ++ V + EM + + ++ L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDS-KIMPNVVIFTTLVDA 293
Query: 260 YVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPP 316
K + A + + + ++P D Y L+ +C S +D ++V+ +++ P
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGVEP-DVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY L+ K+ ID FEE R ++ + +I +A +F
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412
Query: 377 NNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
+ + A+ + + Y ++R LD A+ ++A + + +D
Sbjct: 413 H--EMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470
Query: 437 RFFEEEKDVD 446
R E E D
Sbjct: 471 RVGELEAAGD 480
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 11/246 (4%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTY 147
G A ++ M+ R + + ++D K+N + A + F+ L+E + N Y
Sbjct: 341 GHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMY 400
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L++ YCK + A LFEKM N FN L G ++ L +QM +
Sbjct: 401 SVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVK 460
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
+ T+ + + D D + +M + E K TY+ +Y A +
Sbjct: 461 MGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE-KPVARTYNAFIEVYCSAGKVQ 519
Query: 268 KAE-LALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP----PTNTSYL 322
+AE + ++ EE P D Y LI Y L + +LKS F P++ ++L
Sbjct: 520 EAEDMMVQMKEEGVPPDDFTYTSLIKAY---GKLGLTYSAFDVLKSMFDADCEPSHHTFL 576
Query: 323 VLLQAL 328
L++ L
Sbjct: 577 SLIKQL 582
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 153/378 (40%), Gaps = 55/378 (14%)
Query: 151 LNCYCKELMTERA-LALFEKMDEL------KFLGNTV-AFNNLSTMYLRLGQPEKVRPLV 202
L CY EL+T A L ++M++L +F+ + FN + +Y ++G ++ + +
Sbjct: 157 LKCY-NELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFM 215
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE------------CE----- 245
+M Q +S D T ++ Y D+D RVF EM N CE
Sbjct: 216 CKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRID 275
Query: 246 -----------DKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFL 290
D C Y+ A +K + A+ L+EM R D Y+ L
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTA--LIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSL 333
Query: 291 ISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS 349
I+ C +LD+ R+ ++K P +Y + L K N ++ ++ F+
Sbjct: 334 IAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGV 393
Query: 350 SYDMRLADVIIRAYLQKDMYEEAALIFNNA-KKRANASARFFKSRESFMIYYLRSRQLDL 408
S ++ + V+I Y + +EA +F K + +A F + +I+ L S
Sbjct: 394 SANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNA----LIHGLCSAG--- 446
Query: 409 ALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE-FCKVLKSLNCLDFSAYS 467
L E + + + +P T + ++ D D A + K++ S Y+
Sbjct: 447 NLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYN 506
Query: 468 LLIKTYIAAGKL--ASDM 483
I+ Y +AGK+ A DM
Sbjct: 507 AFIEVYCSAGKVQEAEDM 524
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 9/207 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
++ TYG ++ CK E A LF+ + E N + ++ L Y ++G+ ++ L
Sbjct: 361 DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLF 420
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+M +N S + T+ + ++ +F +M + K T++ L +K
Sbjct: 421 EKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMV-KMGLKPTVYTFNILIGRMLK 479
Query: 263 AELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNT 319
F+ A L+K+ KP R Y+ I +YC+ + +A + + + + PP +
Sbjct: 480 QGDFDDAHKCLQKMMSSGEKPVAR-TYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDF 538
Query: 320 SYLVLLQALAKL----NAIDILKQCFE 342
+Y L++A KL +A D+LK F+
Sbjct: 539 TYTSLIKAYGKLGLTYSAFDVLKSMFD 565
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 134/335 (40%), Gaps = 11/335 (3%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
VT LN + G + + L K G+ A +++E M + + ++
Sbjct: 1174 VTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMN 1233
Query: 120 LTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+ A K F L++ N ++Y L+N YCK+ + A FE+M
Sbjct: 1234 GLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKP 1293
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+TV +N L + G+ + L +M+ L TY V + ++ +F
Sbjct: 1294 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLF 1353
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISL 293
+ + E K +S L +A K E A K+ +E+ D AY+ LI+
Sbjct: 1354 QSI-KKTEHKPNIEVFSILLDGMCRA---GKLEEAWKQFDEISKNGLEPDTIAYNILING 1409
Query: 294 YCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
CN L +AV +W + + P + ++ V++Q L K N I Q EE +R S D
Sbjct: 1410 LCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469
Query: 353 MRLADVIIRAYLQKDMYEEAALIFNNAKKRANASA 387
+ +++ + A + NA ++ S
Sbjct: 1470 EAVTSMLLCLASFDPQWHAALVSLPNALQKGVGSV 1504
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 128/326 (39%), Gaps = 14/326 (4%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G T AL+ + M G + D++ Y + L +FGR + ALE + ME R + +
Sbjct: 1099 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 1158
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
+ ++ + N + + ++ + +T+ L++ CKE A + E M
Sbjct: 1159 NSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRH 1218
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ + +N L +GQ E L + R I L+ +Y + + Y ID
Sbjct: 1219 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 1278
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR----KAYH 288
R F EM + K TY+ L ++ + A K EM+ + Y
Sbjct: 1279 AFRFFEEMRPKGL-KPSTVTYNTLIGALCQS---GRVRTAQKLFVEMQTCGQFLKLSTYC 1334
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
L+ C +L +A++ I K+ P + +LL + + ++ + F+E
Sbjct: 1335 VLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 1394
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAA 373
D +++I K M EA
Sbjct: 1395 GLEPDTIAYNILINGLCNKGMLSEAV 1420
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 53/305 (17%)
Query: 125 NGIAAAEKYFNGLSEYAKNR-------YTYGALLNCYCKELMTERALALFEKMDELKFLG 177
NG+ A K + + K + +TYG +++ CK+ MT AL +F +M L
Sbjct: 1059 NGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILP 1118
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY---------------IVWM- 221
+ V +++L R G+ ++ +M+ R IS D TY + W
Sbjct: 1119 DVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFL 1178
Query: 222 ----------QSYSHLNDIDGV--------ERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+++ IDG+ + E+ + TY+ L +
Sbjct: 1179 NLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLC-- 1236
Query: 264 ELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
L + E A K E + R K +Y+ LI+ YC +D R + ++ P+
Sbjct: 1237 -LVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPST 1295
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD--VIIRAYLQKDMYEEAALIF 376
+Y L+ AL + + ++ F E ++ C + ++L+ V++ + EEA +F
Sbjct: 1296 VTYNTLIGALCQSGRVRTAQKLFVEMQT-CGQF-LKLSTYCVLLDGLCKNGHLEEAMDLF 1353
Query: 377 NNAKK 381
+ KK
Sbjct: 1354 QSIKK 1358
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 5/277 (1%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME K V D+ Y + K G + AL V + ME + + + K
Sbjct: 226 MESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGR 285
Query: 127 IAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
+ A + F + + N TY L++ YC+ ++AL L E+M+ V +N++
Sbjct: 286 MREAMRLFKEIRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSIL 345
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
+G+ L+N+M ++ I DN+T + +Y + D+ +V M E
Sbjct: 346 RKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMV-EAGL 404
Query: 247 KCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNR 305
K TY L + K + A EL L L+ Y +L+ YCN N +AV +
Sbjct: 405 KLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLK 464
Query: 306 VWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ ++ + Y L++ K +D K+ F
Sbjct: 465 LPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIF 501
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 142/336 (42%), Gaps = 28/336 (8%)
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
LLN K+ +T+ +++KM + N +N L + G EK L+++M+ +
Sbjct: 170 VLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESK 229
Query: 209 NISLDNLTYIVWMQSYS----HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
+ D TY + Y H + +R+ E K TY++L + K
Sbjct: 230 CVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGI-----KPDIVTYNSLIHGFCKEG 284
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLV 323
+A K++ + P + Y LI YC ++LD R+ +++ PT +Y
Sbjct: 285 RMREAMRLFKEIRDATP-NHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNS 343
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ-KDMYEEAALIFNNAKKR 382
+L+ L ++ I + E + D + +I AY + DM ++AL N
Sbjct: 344 ILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDM--KSALKVKNRMVE 401
Query: 383 ANASARFFKSRESFMIYYLRSRQLD----LALNEMEAALSEAK-QFHWRPMQVTVDTFFR 437
A F + ++ + + + R++D L L+ ++A S + + W VD +
Sbjct: 402 AGLKLDQF-TYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSW-----LVDGYCN 455
Query: 438 FFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTY 473
EE + +EF V K L C+D S Y LI+ +
Sbjct: 456 QQNEEAVLKLPDEF--VRKGL-CVDKSLYRALIRRF 488
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
++ Y AL+ +CK + A +F M E LG++V + +L+ Y +LG+ L+
Sbjct: 477 DKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLL 536
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDI 230
++M +R + + Y SY+ N I
Sbjct: 537 DEMYKRRLMITLKIYRALNASYAGDNSI 564
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 132/308 (42%), Gaps = 14/308 (4%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
L Y V++L + G+++ ALEV EW+ A L + + AA + F L
Sbjct: 5 LVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESL 64
Query: 138 SE---YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ Y+ + Y Y +L++ + + + LFE M GN V +N + +Y + G
Sbjct: 65 KQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGD 124
Query: 195 P-EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNECEDKCRWT 251
++++ L +MK IS D+ TY + + + R+F EM C ++
Sbjct: 125 SWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNR---V 181
Query: 252 TYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWG 308
TY+ L +Y K + ++A L ++E + P + Y+ LI+ Y D A
Sbjct: 182 TYNALLDVYGKGGMHKEASELLVEMEAAGISP-NIVTYNELIAAYARAGLCDEAAALKKS 240
Query: 309 ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDM 368
+L P +Y L+ A + + + F E + ++ +++I Y + +
Sbjct: 241 LLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEK 300
Query: 369 YEEAALIF 376
++ +F
Sbjct: 301 LDDMMKVF 308
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 3/195 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
NR TY ALL+ Y K M + A L +M+ N V +N L Y R G ++ L
Sbjct: 179 NRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALK 238
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ + + D TY + +++ + F EM + TY+ L IY +
Sbjct: 239 KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGR 297
Query: 263 AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTS 320
E + K ++E D ++ L+ + N L V+ V+ +K + + P +
Sbjct: 298 MEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDT 357
Query: 321 YLVLLQALAKLNAID 335
+ +L++ + +D
Sbjct: 358 FNILIECYGRCGYVD 372
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 127 IAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
+A + Y NG S K + A+++ K ERA+ L E++ + + + V +N L
Sbjct: 482 LALNQLYDNGHSPDIK---VFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLM 538
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+MY R G K ++++M++ + + +TY + SY+ +D RVF +M
Sbjct: 539 SMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM 592
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 125/290 (43%), Gaps = 9/290 (3%)
Query: 94 HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTYGALL 151
H L ++ M +H ++ F++ + AK + A F+ + + N TYG ++
Sbjct: 359 HGL--LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
CK E A+ FE+M + + + +N+L + +K + L+ +M R I
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
LD + + + S+ + E++F ++ K TYS L Y A ++A
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 272 ALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQAL 328
L + MKP D Y+ LI+ YC S + DA+ + S P +Y ++LQ L
Sbjct: 536 LLASMVSVGMKP-DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+ K+ + + ++ ++I+ + ++ +EA +F N
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 103/257 (40%), Gaps = 10/257 (3%)
Query: 129 AAEKYFNGLSEYAKNRY-----TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
A +K L+ KN TY ++++ YC + A+ +KM + V +N
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+L + G+ + R + + M +R + + TY +Q Y+ + + + M
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL- 300
+ +S L Y K ++A L K+ + + P D Y +I + C + +
Sbjct: 369 GIHPNHY-VFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-DTVTYGTVIGILCKSGRVE 426
Query: 301 DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
DA+ ++ P N Y L+ +L + D K+ E R D + II
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 361 RAYLQKDMYEEAALIFN 377
++ ++ E+ +F+
Sbjct: 487 DSHCKEGRVIESEKLFD 503
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 9/247 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKM--DELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N ++Y LL C E ++ AL L + M D + V++ + + + G +K
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
++M R I + +TY + + +D V M N CR TY+++
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR--TYNSIVHG 278
Query: 260 YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPP 316
Y + ++A LKK+ + ++P D Y+ L+ C +++ + K P
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEP-DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
T+Y LLQ A A+ + + + + ++I AY ++ ++A L+F
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 377 NNAKKRA 383
+ +++
Sbjct: 398 SKMRQQG 404
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 115/292 (39%), Gaps = 13/292 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ SL F ++ A E+I M R + F +D K + +EK F+ +
Sbjct: 451 IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY L++ YC + A L M + + V +N L Y ++ + E
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M+ +S D +TY + +Q + ++ + E + +TY+ +
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI-TESGTQLELSTYNIILHGL 629
Query: 261 VKAELFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-F 314
K L ++A L L L+ + + ++ +I D ++ L +
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQ----LETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
P +Y ++ + L + ++ L F E + + R+ + I+R LQ+
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 574
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 137 LSEYAK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
+ E AK N T G ++ YC+E L +M E++ N V FN+L ++ +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
+ + ++ MK+ N+ D +TY M ++S ++ +VF EM + K YS
Sbjct: 312 DGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV-KAGVKPDAHAYSI 370
Query: 256 LASIYVKAELFEKAELALKKL-EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
LA YV+A+ +KAE L+ L E +P + + +IS +C+ ++D RV+
Sbjct: 371 LAKGYVRAKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVF 422
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 137/343 (39%), Gaps = 16/343 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N YT ++N CK+ E + M+ + V +N L Y R G E+ L+
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
N R + LTY + + D + V EM T + L I +
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375
Query: 263 AELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
+ E E+ +EM R D ++ LI + +L A+ + +S P
Sbjct: 376 DNILEAQEI----FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
N Y +L+ + A+ + +E +R D+ + + +K M+ +A ++FN
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
+R F + + + Y + +D ALN EA + + + +P +VT +T
Sbjct: 492 EMVERGMVPD--FYTFTTLIRGYCKDGNMDKALNLFEAMV----RTNLKPDKVTYNTLID 545
Query: 438 FFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKL 479
F + ++ A+E + + + D +Y ++ + ++G L
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 12/219 (5%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTY 147
G AL++ + M +R + +L+ K A A+ FN + E + YT+
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L+ YCK+ ++AL LFE M + V +N L + + G+ + + L + M +
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC---RWTTYSNLASIYVKAE 264
++I D+++Y + + G+ +C++ +K T + L Y ++
Sbjct: 566 KDIIPDHISYGTVLNGFCS----SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621
Query: 265 LFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLD 301
KA L K+ + P D +Y+ LI Y +NL+
Sbjct: 622 DMPKAYEYLSKMISNGIIP-DSFSYNTLIDGYLKEANLE 659
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 128/339 (37%), Gaps = 42/339 (12%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--K 142
L K G+Y A +V+ M + + + L + + I A++ F+ +S
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ ++ +L+ + +AL F +M+ + + V + L + R G +
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMR 455
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++M R +D +TY ++ + +F EM E + T++ L Y K
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV-ERGMVPDFYTFTTLIRGYCK 514
Query: 263 AELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
+KA + + +KP D+ Y+ LI +C + +W +++ P +
Sbjct: 515 DGNMDKALNLFEAMVRTNLKP-DKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI 573
Query: 320 SYLVLLQALAKLN----AIDILKQCFEEW------------ESRCSSYDMRLA------- 356
SY +L A+++ Q E+ + C S DM A
Sbjct: 574 SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633
Query: 357 ------------DVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ +I YL++ E+A ++ N +KR
Sbjct: 634 ISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T L+ YC+ +A KM + ++ ++N L YL+ EK L+
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILI 665
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
N+M++R + + +TY + + + + E+V +M E TYS+L + +V
Sbjct: 666 NEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI-EIGINPDGATYSSLINGHVS 724
Query: 263 AELFEKA 269
+ ++A
Sbjct: 725 QDNMKEA 731
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 156/372 (41%), Gaps = 43/372 (11%)
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
+L+ + K TE+A L+ +M ++ + V FN + + + G+ +K + + M+
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT-----TYSNLASIYVKAE 264
I + +TY + Y ++G +F M KCR TY + S K
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARMIFDLM------KCRGVKPDSYTYGSFISGMCKEG 275
Query: 265 LFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYL 322
E+A L+K++E+ R Y+ LI YCN NL+ A + +++ PT ++Y
Sbjct: 276 KLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYN 335
Query: 323 VLLQAL---AKLNAID-ILKQCFEE--------------WESRCSSYD--MRLADVIIRA 362
+L+ AL K++ D I+K+ E+ RC + L D +I
Sbjct: 336 MLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISK 395
Query: 363 YLQKDMYEEAALIFNNAKK-RANASARFFKS---RESFMIYYLRSRQLD--LALNEME-- 414
+Q +LI+ +K+ R + F+ + F + + +D A M+
Sbjct: 396 GIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRA 455
Query: 415 -AALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKT 472
A L E Q P +VT +T + E V+ A E + +KS D +Y+ LI
Sbjct: 456 FAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISG 515
Query: 473 YIAAGKLASDMR 484
Y G + R
Sbjct: 516 YSKRGDMKDAFR 527
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 5/198 (2%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G + A + + M S+ + + + + + +K + A+ F + + +
Sbjct: 380 GNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMF 439
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
AL++ +C +RA A+ ++MD++K + + V FN L R G+ E R L+ +MK
Sbjct: 440 NALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKS 499
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
R I D+++Y + YS D+ RV EM + + TY+ L K E +
Sbjct: 500 RGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNP-TLLTYNALIQGLCKNEEGD 558
Query: 268 KAELALKKL--EEMKPRD 283
AE LK++ + + P D
Sbjct: 559 HAEQLLKEMISKGITPND 576
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 129/333 (38%), Gaps = 48/333 (14%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EY 140
+ L K G+ + A E I ME+ + + + + + A F+ +
Sbjct: 198 INVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGV 257
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE---- 196
+ YTYG+ ++ CKE E A + EKM E+ V +N L Y G E
Sbjct: 258 KPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFD 317
Query: 197 -------------------------------KVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
+ ++ +M ++ + D++TY + + Y
Sbjct: 318 YRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYC 377
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRD 283
++ + EM ++ R TY++L + K ++A+ +K+ + + P D
Sbjct: 378 RCGNVKKAFTLHDEMISKGIQPTR-VTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP-D 435
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILKST----FPPTNTSYLVLLQALAKLNAIDILKQ 339
++ LI +C N+D R + +LK P ++ L+Q + ++ ++
Sbjct: 436 LIMFNALIDGHCANGNMD---RAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARE 492
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
EE +SR D + +I Y ++ ++A
Sbjct: 493 LIEEMKSRGIKPDHISYNTLISGYSKRGDMKDA 525
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L+N YC+ ++A L ++M V + +L + + G+ ++ L ++
Sbjct: 368 TYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKI 427
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ I D + + + + ++D + EM D+ + + ++
Sbjct: 428 VRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEM-----DQMKVVPDEVTFNTLMQGRC 482
Query: 266 FE-KAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
E K E A + +EEMK R D +Y+ LIS Y ++ RV +L F PT
Sbjct: 483 REGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLL 542
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESR 347
+Y L+Q L K D +Q +E S+
Sbjct: 543 TYNALIQGLCKNEEGDHAEQLLKEMISK 570
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 147/378 (38%), Gaps = 64/378 (16%)
Query: 44 DKLYKRLSALGATGGSV--TGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW 101
DK K + G V TG +N Y +GK + E C YR
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI-----EAC-------SAYRS------- 582
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELM 159
M + + + V ++ K + + AE+ F + A + ++YG L+N + K
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
++A ++F++M E N + +N L + R G+ EK + L+++M + + + +TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 220 WMQSYSHLNDIDGVERVFYEM------------CNECEDKCRWTTYSNLASIYVKAEL-- 265
+ Y D+ R+F EM + CR +I+ +
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 266 ----------------FEKAELALKKLEEM---------KPRDRKAYHFLISLYCNTSNL 300
F K EL + L + KP D Y+ +I C NL
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNL 821
Query: 301 DAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
+A ++ ++ + PT +Y LL K+ + F+E + D + VI
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 360 IRAYLQKDMYEEAALIFN 377
I A+L++ M +A ++ +
Sbjct: 882 INAFLKEGMTTKALVLVD 899
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 11/230 (4%)
Query: 128 AAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
A+A+KY + E N+ L+N YCK+ A + + M + LG+ + L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECE 245
+ + + + +M+ + I+ D +Y V + +S L ++ +F EM E
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 246 DKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLD 301
Y+ L + ++ EKA+ + L+EM + + Y +I YC + +L
Sbjct: 659 TP-NVIIYNMLLGGFCRSGEIEKAK---ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 302 AVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
R++ +K P + Y L+ +LN ++ F + C+S
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS 764
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 10/244 (4%)
Query: 42 NEDKLYKRLSALGATGGSVTGALN---AYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
+D L+K +V GAL + I +G K + + L K R A +
Sbjct: 240 GKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSL 299
Query: 99 IEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTYGALLNCYCK 156
+ M+S + +++ +D K AA+ + + + N Y Y + K
Sbjct: 300 LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSK 359
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E + E+A ALF+ M + A+ +L Y R + L+ +MK+RNI + T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR--WTTYSNLASIYVKAELFEKAELALK 274
Y ++ D+DG + EM CR Y+ L +++ F A LK
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEM---IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 275 KLEE 278
+++E
Sbjct: 477 EMKE 480
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 3/235 (1%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTYG ++ C + A + ++M N V + L +L+ + ++ +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK++ I+ D Y + S +D EM E K TY S Y++A
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV-ENGLKPNAFTYGAFISGYIEAS 536
Query: 265 LFEKAELALKKLEEMKPRDRKAY-HFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYL 322
F A+ +K++ E K LI+ YC ++A + ++ +Y
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
VL+ L K + +D ++ F E + + D+ V+I + + ++A+ IF+
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ CKE E A LF +M + + + +L Y ++G+ ++ P+
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 203 NQMKQRNISLDNLTYIVWMQSY----SHLNDIDGVERVFYEMCNECEDKCRW--TTYSNL 256
++ I D++ Y V + ++ + V+++F + N +D C+ +T L
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK--NAVDDGCKLSISTCRAL 921
Query: 257 ASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSN 299
S + K E AE ++ + ++ D LI+ C +SN
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R + L+ + E A FE M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLXEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LI+ C + +LDA + V ++
Sbjct: 259 STLLPGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSGHLDAASDVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKXGQYD 343
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 19/296 (6%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLT---AKTNGIAAAEKYFN--GLSEY 140
+ R R A E + +S K F D VY +L + I+ AEK F L+
Sbjct: 228 ISNLSRKRRASEAQSFFDSLKDRFE-PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGI 286
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N YTY +++ C+ RA +F M + N + FNNL ++++ G+ EKV
Sbjct: 287 EPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQ 346
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
+ NQMK+ D +TY ++++ +++ +V M +CE +T++ +
Sbjct: 347 VYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE--VNASTFNTIFRY 404
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGIL--KSTFPP 316
K A K+ E K + Y+ L+ ++ + + D V ++ + K P
Sbjct: 405 IEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPN 464
Query: 317 TNTSYLVLLQALAKL----NAIDILKQCFEE--WESRCSSYDMRLADVIIRAYLQK 366
NT Y +L+ + NA + K+ EE S Y+M LA + L+K
Sbjct: 465 VNT-YRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKK 519
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 5/261 (1%)
Query: 73 TVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEK 132
TVR + C +L + GR AL + M R + + V +D K + A K
Sbjct: 289 TVRTYTVLVC--ALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALK 346
Query: 133 YFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYL 190
N + E A + + AL+ YCK M E A+ + M+ K N +N L +
Sbjct: 347 MLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFC 406
Query: 191 RLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW 250
R ++ L+N+M + +S D +TY + + +D R+F M + +W
Sbjct: 407 RGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQW 466
Query: 251 TTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-I 309
T + + + + E ++ E+ + AY LI YC ++ ++ +
Sbjct: 467 TFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRM 526
Query: 310 LKSTFPPTNTSYLVLLQALAK 330
L P + ++ V++ L K
Sbjct: 527 LAEECLPNSITFNVMIDGLRK 547
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 130/319 (40%), Gaps = 24/319 (7%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM------YLRLGQPEKVR 199
+Y LL C + M + ++L+++M L GN+V F NL T+ Y +LG R
Sbjct: 153 SYNRLLMCLSRFSMVDEMISLYKEM--LTDNGNSV-FPNLITLNTMLNSYCKLGNMAVAR 209
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
++ + D TY + Y +D++ VF M + +Y+NL
Sbjct: 210 LFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM-----PRRNAVSYTNLIHG 264
Query: 260 YVKA-ELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTS-NLDAVNRVWGILKSTFPPT 317
+A +L E E + E+ + Y L+ C + L+A++ + + P
Sbjct: 265 LCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPN 324
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y VL+ L K +D + E + + + + +I +Y ++ M E+A +
Sbjct: 325 VYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLG 384
Query: 378 -NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
K+ + R + + + R + +D A+ A L++ + P VT +T
Sbjct: 385 LMESKKVCPNVRTYN---ELICGFCRGKSMDRAM----ALLNKMVESKLSPDVVTYNTLI 437
Query: 437 RFFEEEKDVDGAEEFCKVL 455
E VD A +++
Sbjct: 438 HGLCEVGVVDSASRLFRLM 456
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 123/309 (39%), Gaps = 12/309 (3%)
Query: 83 VRSLRKFGRYRHALEVI-EWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN--GLSE 139
VR L G R AL ++ +S T ++ K +A A + F+ L
Sbjct: 9 VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
A N TY AL++ Y E+ ALFE+M N +N L + R G+ E+ R
Sbjct: 69 LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L ++M R I + ++Y + + ++ M E + T++ L
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE-GTRPSIITFNLLVDG 187
Query: 260 YVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVWGILKS-TF 314
Y KA K AL +MK + Y+ LI+ +C ++ NR +K
Sbjct: 188 YGKA---GKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGL 244
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
PT +Y +L+ + A+ N + + E D V++RA + ++A
Sbjct: 245 EPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARK 304
Query: 375 IFNNAKKRA 383
+F + ++
Sbjct: 305 LFQSMGEKG 313
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELM 159
M+ R + + + + +D A+ N + A + G+ + + +TYG L+ C E
Sbjct: 239 MKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
+ A LF+ M E + V ++ + Y R G K L+ +M+Q+ + ++ +Y
Sbjct: 299 MKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASY 356
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 137/343 (39%), Gaps = 16/343 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N YT ++N CK+ E + M+ + V +N L Y R G E+ L+
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
N R + LTY + + D + V EM T + L I +
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375
Query: 263 AELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
+ E E+ +EM R D ++ LI + +L A+ + +S P
Sbjct: 376 DNILEAQEI----FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
N Y +L+ + A+ + +E +R D+ + + +K M+ +A ++FN
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
+R F + + + Y + +D ALN EA + + + +P +VT +T
Sbjct: 492 EMVERGMVPD--FYTFTTLIRGYCKDGNMDKALNLFEAMV----RTNLKPDKVTYNTLID 545
Query: 438 FFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKL 479
F + ++ A+E + + + D +Y ++ + ++G L
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 12/219 (5%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTY 147
G AL++ + M +R + +L+ K A A+ FN + E + YT+
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L+ YCK+ ++AL LFE M + V +N L + + G+ + + L + M +
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC---RWTTYSNLASIYVKAE 264
++I D+++Y + + G+ +C++ +K T + L Y ++
Sbjct: 566 KDIIPDHISYGTVLNGFCS----SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG 621
Query: 265 LFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLD 301
KA L K+ + P D +Y+ LI Y +NL+
Sbjct: 622 DMPKAYEYLSKMISNGIIP-DSFSYNTLIDGYLKEANLE 659
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T L+ YC+ +A KM + ++ ++N L YL+ EK L+
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILI 665
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
N+M++R + + +TY + + + + E+V +M E TYS+L + +V
Sbjct: 666 NEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI-EIGINPDGATYSSLINGHVS 724
Query: 263 AELFEKA 269
+ ++A
Sbjct: 725 QDNMKEA 731
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 128/339 (37%), Gaps = 42/339 (12%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--K 142
L K G+Y A +V+ M + + + L + + I A++ F+ +S
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ ++ +L+ + +AL F +M+ + + V + L + R G +
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMR 455
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++M R +D +TY ++ + +F EM E + T++ L Y K
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV-ERGMVPDFYTFTTLIRGYCK 514
Query: 263 AELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
+KA + + +KP D+ Y+ LI +C + +W +++ P +
Sbjct: 515 DGNMDKALNLFEAMVRTNLKP-DKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHI 573
Query: 320 SYLVLLQALAKLN----AIDILKQCFEEW------------ESRCSSYDMRLA------- 356
SY +L A+++ Q E+ + C S DM A
Sbjct: 574 SYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633
Query: 357 ------------DVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ +I YL++ E+A ++ N +KR
Sbjct: 634 ISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 12/271 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--- 139
+RS G ++ ++++ + M+ + S F L + K A F+ +
Sbjct: 145 IRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYG 204
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ YT+ L+N +CK M + A +F+ M+ + V +N + R G+ +
Sbjct: 205 VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAH 264
Query: 200 PLVNQM--KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+++ M K ++ + ++Y ++ Y +ID VF++M + K TY+ L
Sbjct: 265 NVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGL-KPNAVTYNTLI 323
Query: 258 SIYVKAELFEKAELAL----KKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKS 312
+A +++ + L P D ++ LI +C+ +LDA +V+ +L
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAP-DACTFNILIKAHCDAGHLDAAMKVFQEMLNM 382
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
P + SY VL++ L N D + F E
Sbjct: 383 KLHPDSASYSVLIRTLCMRNEFDRAETLFNE 413
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 79/419 (18%), Positives = 169/419 (40%), Gaps = 34/419 (8%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF-------N 135
+++LR L +W+ ++ F + L+ + + A + N
Sbjct: 72 LQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSN 131
Query: 136 GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
G + ++RY + +L+ Y + + ++ LF+ M ++ + + FN+L ++ L+ G+
Sbjct: 132 GCVKL-QDRY-FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRT 189
Query: 196 EKVRPLVNQMKQR-NISLDNLTYIVWMQSYSHLNDIDGVERVFYEM----CNECEDKCRW 250
L ++M++ ++ D+ T+ + + + +D R+F +M CN
Sbjct: 190 GMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNP-----DV 244
Query: 251 TTYSNLASIYVKAELFEKAELA----LKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNR 305
TY+ + +A + A LKK ++ P + +Y L+ YC +D AV
Sbjct: 245 VTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHP-NVVSYTTLVRGYCMKQEIDEAVLV 303
Query: 306 VWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSY--DMRLADVIIRAY 363
+L P +Y L++ L++ + D +K +++ D +++I+A+
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAH 363
Query: 364 LQKDMYEEAALIFN---NAKKRANASARFFKSRESFMIY-YLRSRQLDLALNEMEAALSE 419
+ A +F N K ++++ R M + R+ L L E E L +
Sbjct: 364 CDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK 423
Query: 420 AKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGK 478
+ +P+ + F + AE+ + L D +Y LI + GK
Sbjct: 424 DE---CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGK 479
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 18/310 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+RSL K G+ A +E + + + + F +Y+ + + I A+ F+G+ ++
Sbjct: 23 LRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHGF 81
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
NR TY ALL+ C A AL+E+M + + + V +N L + ++G+ ++
Sbjct: 82 WPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALK 141
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ + +R D +TY + + + +D +R+ M +E TY++L +
Sbjct: 142 IFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP-DVVTYNSLVNGL 200
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYC-NTSNLDAVNRVW-GILKSTFPPTN 318
K ++A + + +++ + Y LIS C L++ ++ ++ + P
Sbjct: 201 CKNGRVDEARMLI--VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDI 258
Query: 319 TSYLVLLQALAKLNAIDILKQCF-----EEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
SY L+ LA+ + + F + +E +Y +++I L++D EA
Sbjct: 259 VSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTY-----NILIDGLLKEDRVNEAF 313
Query: 374 LIFNNAKKRA 383
+F+ K
Sbjct: 314 ELFSGLVKHG 323
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 107/300 (35%), Gaps = 35/300 (11%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K R A E+ + + + V++D K + A + E
Sbjct: 300 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 359
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ ++ A++N CKE + A L M+ N ++FN L R G+ +K
Sbjct: 360 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 419
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+M +R + +TY + +DG+ + E
Sbjct: 420 TFKEMLKRGVKPTVVTYNIL---------VDGLCKARQE--------------------- 449
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNT 319
+ E L +E+ + D Y LI LD R+ G +++ P
Sbjct: 450 --GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 507
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
+Y L+ L L+ +D + F + D II A +++M ++A +F+ +
Sbjct: 508 TYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGS 567
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 15/259 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF-AVYLDLTAKTNGIAAAEKYFNGLSEYA 141
+RS + G ++ ++++ E M+ + F +V L L + A E Y L Y
Sbjct: 162 IRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYG 221
Query: 142 --KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ YTY L+ +CK M + F++M + V +N L R G+ +
Sbjct: 222 VKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAH 281
Query: 200 PLVNQM--KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
LVN M K +++S D +TY ++ Y ++D + EM N K TY+ L
Sbjct: 282 NLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEM-NGRGLKPNIVTYNTLI 340
Query: 258 SIYVKAELFEKAELALKKLEEMKPR-----DRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
+A+ ++K + + LE+MK D ++ LI+ +C NLD +V+ +K
Sbjct: 341 KGLCEAQKWDKMK---EILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKK 397
Query: 313 -TFPPTNTSYLVLLQALAK 330
+ SY VL++ L +
Sbjct: 398 LEVSADSASYSVLIRTLCQ 416
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 78/414 (18%), Positives = 164/414 (39%), Gaps = 29/414 (7%)
Query: 84 RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN 143
++LR A W+ + + + + L++ + + A + + + +
Sbjct: 90 QTLRHIKVPTKAFLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNG 149
Query: 144 RYT-----YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ +L+ Y + + + ++ LFE M + V FN++ + L+ G+
Sbjct: 150 EVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMA 209
Query: 199 RPLVNQM-KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-ECEDKCRWTTYSNL 256
+ + ++M K + D TY + ++ + + +D F EM + +C+ TY+ L
Sbjct: 210 KEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDV--VTYNTL 267
Query: 257 ASIYVKAELFEKAELAL----KKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILK 311
+A + A + KK +++ P D Y LI YC +D A++ + +
Sbjct: 268 VDGLCRAGKIKVAHNLVNGMSKKCKDLSP-DVVTYTTLIRGYCRKQEVDEALDILEEMNG 326
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSY-DMRLADVIIRAYLQKDMYE 370
P +Y L++ L + D +K+ E+ + S D + +I ++ +
Sbjct: 327 RGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLD 386
Query: 371 EAALIFNNAKKRANASARFFKSRESFMIY-------YLRSRQLDLALNEMEAALSEAKQF 423
EA +F N KK ++ + S +I Y ++ L L E E LS +
Sbjct: 387 EAFKVFENMKKLEVSAD---SASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLS---SY 440
Query: 424 HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAG 477
+P+ + F++ E AE + L D +Y ++I + G
Sbjct: 441 GPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEG 494
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 147/378 (38%), Gaps = 64/378 (16%)
Query: 44 DKLYKRLSALGATGGSV--TGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEW 101
DK K + G V TG +N Y +GK + E C YR
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI-----EAC-------SAYRS------- 582
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELM 159
M + + + V ++ K + + AE+ F + A + ++YG L+N + K
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
++A ++F++M E N + +N L + R G+ EK + L+++M + + + +TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 220 WMQSYSHLNDIDGVERVFYEM------------CNECEDKCRWTTYSNLASIYVKAEL-- 265
+ Y D+ R+F EM + CR +I+ +
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 266 ----------------FEKAELALKKLEEM---------KPRDRKAYHFLISLYCNTSNL 300
F K EL + L + KP D Y+ +I C NL
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNL 821
Query: 301 DAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
+A ++ ++ + PT +Y LL K+ + F+E + D + VI
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 360 IRAYLQKDMYEEAALIFN 377
I A+L++ M +A ++ +
Sbjct: 882 INAFLKEGMTTKALVLVD 899
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 11/230 (4%)
Query: 128 AAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
A+A+KY + E N+ L+N YCK+ A + + M + LG+ + L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECE 245
+ + + + +M+ + I+ D +Y V + +S L ++ +F EM E
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 246 DKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLD 301
Y+ L + ++ EKA+ + L+EM + + Y +I YC + +L
Sbjct: 659 TP-NVIIYNMLLGGFCRSGEIEKAK---ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 302 AVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
R++ +K P + Y L+ +LN ++ F + C+S
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS 764
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 10/244 (4%)
Query: 42 NEDKLYKRLSALGATGGSVTGALN---AYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
+D L+K +V GAL + I +G K + + L K R A +
Sbjct: 240 GKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSL 299
Query: 99 IEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTYGALLNCYCK 156
+ M+S + +++ +D K AA+ + + + N Y Y + K
Sbjct: 300 LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSK 359
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E + E+A ALF+ M + A+ +L Y R + L+ +MK+RNI + T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR--WTTYSNLASIYVKAELFEKAELALK 274
Y ++ D+DG + EM CR Y+ L +++ F A LK
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEM---IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 275 KLEE 278
+++E
Sbjct: 477 EMKE 480
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 3/235 (1%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTYG ++ C + A + ++M N V + L +L+ + ++ +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK++ I+ D Y + S +D EM E K TY S Y++A
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV-ENGLKPNAFTYGAFISGYIEAS 536
Query: 265 LFEKAELALKKLEEMKPRDRKAY-HFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYL 322
F A+ +K++ E K LI+ YC ++A + ++ +Y
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
VL+ L K + +D ++ F E + + D+ V+I + + ++A+ IF+
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ CKE E A LF +M + + + +L Y ++G+ ++ P+
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 203 NQMKQRNISLDNLTYIVWMQSY----SHLNDIDGVERVFYEMCNECEDKCRW--TTYSNL 256
++ I D++ Y V + ++ + V+++F + N +D C+ +T L
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK--NAVDDGCKLSISTCRAL 921
Query: 257 ASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSN 299
S + K E AE ++ + ++ D LI+ C +SN
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 133/308 (43%), Gaps = 22/308 (7%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ S + G+Y +LE++E M+ K+ S + ++ A+ + LS +A+
Sbjct: 184 INSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCAR-----GGLNWEGLLSLFAE 238
Query: 143 NRY--------TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
R+ TY LLN + + A +F M+E + + + NL + +L +
Sbjct: 239 MRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNK 298
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTT 252
EKV L+ +M+ D +Y V +++Y+ DI VF +M E +C T
Sbjct: 299 LEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQM---QEARCVPNAVT 355
Query: 253 YSNLASIYVKAELFEKA-ELALK-KLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGI 309
YS L ++Y ++ EL L+ K+ +P D Y+ LI ++ + V +
Sbjct: 356 YSMLLNLYGGHGRYDDVRELFLEMKVSNTEP-DVGTYNVLIEVFGEGGYFKEVVTLFHDM 414
Query: 310 LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMY 369
++ P +Y L+ A K + K+ + + + +I AY Q Y
Sbjct: 415 VEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASY 474
Query: 370 EEAALIFN 377
EEA ++FN
Sbjct: 475 EEALVMFN 482
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 7/211 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N + Y +++ +E + E++ +FE+M + ++ L Y R GQ E L+
Sbjct: 141 NEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELL 200
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLN-DIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+MK+ ++ LTY + S + + +G+ +F EM +E + TY+ L +
Sbjct: 201 ERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEG-IQPDIITYNTLLNACA 259
Query: 262 KAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP-PTN 318
L ++AE+ + + E M P D Y L+ + + L+ V+ + ++S+ P
Sbjct: 260 NRGLGDEAEMVFRTMNEGGMVP-DITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDI 318
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEW-ESRC 348
+SY VLL+A A I F + E+RC
Sbjct: 319 SSYNVLLEAYASKGDIRHAMGVFRQMQEARC 349
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 23/276 (8%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDF-----AVYLDLTAKTNGIAAAEKYFNGLSEYAKNR 144
G+ AL+ E M R + + + A+++D A E NG S +
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFS---PDV 289
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+TY L+N YCKE ++AL +FE+M + V + +L ++ R GQ ++ L N
Sbjct: 290 FTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNV 349
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK---CRWTTYSNLASIYV 261
++ I D + Y + S+ D+ ER YE+ E E K TY+ L +
Sbjct: 350 AVKKGIRPDVVMYNALINSHCTGGDM---ERA-YEIMAEMEKKRIPPDDMTYNTLMRGFC 405
Query: 262 KAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPP 316
L + + A ++EM R D +Y+ LIS Y ++ RV ++ F P
Sbjct: 406 ---LLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNP 462
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
T +Y L+Q L K+ D + +E ++ + D
Sbjct: 463 TLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPD 498
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
YC K G + ALEV E M + + + + + + ++ + ++ FN +
Sbjct: 299 YC-----KEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ Y AL+N +C ERA + +M++ + + + +N L + LG+ ++
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
R L+++M +R I D ++Y + YS DI RV EM ++ + TY+ L
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPT-LMTYNALIQ 472
Query: 259 IYVKAELFEKAELALKKL 276
K + AE +K++
Sbjct: 473 GLCKIRQGDDAENLMKEM 490
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 122/336 (36%), Gaps = 88/336 (26%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRK--MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL- 137
+C R GR + ALEV+ M R YT +A + K + A K F+ +
Sbjct: 157 FCAR-----GRVQAALEVMREMRERGGIAPDKYT-YATLISGWCKIGRMEDAVKVFDEML 210
Query: 138 --SEYAKNRYTYGALLNCYC-----------KELMTERALAL------------------ 166
E A + Y AL+ YC +E M +R +A+
Sbjct: 211 TKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARA 270
Query: 167 ------FEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
E+M + F + +N L Y + G +K + +M Q+ + +TY
Sbjct: 271 SDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSL 330
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
+ +S + +R+F +A+KK ++
Sbjct: 331 IYVFSRKGQVQETDRLF--------------------------------NVAVKK--GIR 356
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGIL----KSTFPPTNTSYLVLLQALAKLNAIDI 336
P D Y+ LI+ +C +++ R + I+ K PP + +Y L++ L +D
Sbjct: 357 P-DVVMYNALINSHCTGGDME---RAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ +E R D+ + +I Y K ++A
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDA 448
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 117/296 (39%), Gaps = 22/296 (7%)
Query: 108 HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRY----TYGALLNCYCKELMTERA 163
H S + +L LTA AAA + L YA+ + A L+ L + A
Sbjct: 45 HLSASPSLPHLLLTAS----AAARPHATSLRLYAQLKSLSVPIPVASLHPLLSSLPSAPA 100
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
ALF + L+ T FN + G+P + L+ QM + N +TY +
Sbjct: 101 FALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPRPN----AVTYNTVIAG 156
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD 283
+ + V EM TY+ L S + K + E A+K +EM +
Sbjct: 157 FCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCK---IGRMEDAVKVFDEMLTKG 213
Query: 284 RKA-----YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
A Y+ LI YC+ LD A+ +++ T +Y +L+ AL
Sbjct: 214 EVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDA 273
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKRANASARFFKS 392
EE + S D+ +++I Y ++ ++A +F ++K A+A + S
Sbjct: 274 YAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTS 329
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 126/308 (40%), Gaps = 11/308 (3%)
Query: 77 DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG 136
DML +R + G A++V++ M + + T + ++ K + A K+ N
Sbjct: 286 DML---IRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNN 342
Query: 137 LSEYAKNRYT--YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ Y N T Y +L C+ A L ++M N V FN + + G
Sbjct: 343 MGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL 402
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
E+ L+ QM++ ++ +TY + + ID +F M C K TY+
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM--PC--KPNTITYT 458
Query: 255 NLASIYVKAE-LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKS 312
L + AE L AEL + L P + ++ L++ +C LD A+ V +++
Sbjct: 459 TLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEH 518
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y L + K + + + S+ S D+ II ++D EEA
Sbjct: 519 GCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEA 578
Query: 373 ALIFNNAK 380
+F+ A+
Sbjct: 579 IQMFHLAQ 586
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 101/247 (40%), Gaps = 9/247 (3%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
N TY LL CK E+A+A+ ++M N V +N + R G+ + R L
Sbjct: 175 PNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDL 234
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASI 259
+N++ D ++Y ++ D VE +F EM E C T+ L
Sbjct: 235 LNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEM---MEKNCMPNEVTFDMLIRF 291
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPT 317
+ + + E+A L+++ E + + + +I+ C +D + + S P
Sbjct: 292 FCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPD 351
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY +L+ L + + K+ +E + C ++ + I QK + E+A ++
Sbjct: 352 TISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTF-NTFICILCQKGLIEQAIMLI 410
Query: 377 NNAKKRA 383
++
Sbjct: 411 EQMQEHG 417
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 120/263 (45%), Gaps = 9/263 (3%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ + ++ ++ Y V L G+ A +++ M S + + + ++ K
Sbjct: 329 MQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A + F+ + + N T+ LL+ YCK E A L + M E FL N +N
Sbjct: 389 LEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNC 448
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + R G+ E+V+ L+N+M+ R + D +TY + + ++ + R+ EM ++
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDK- 507
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR--DRKAYHFLISLYCNTSNLDA 302
K TY+ L + Y E +A L L+K E + R + Y+ LI YC L+
Sbjct: 508 GLKPSHLTYNILLNGYC-MEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLED 566
Query: 303 VNRVWG-ILKSTFPPTNTSYLVL 324
N + +L+ P T+Y ++
Sbjct: 567 ANGLLNEMLEKGLIPNRTTYEII 589
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LLN YC E AL L ++M++ N V +N L Y R G+ E L+N+M
Sbjct: 515 TYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEM 574
Query: 206 KQRNISLDNLTYIVW---MQSYSHLNDIDG 232
++ + + TY + M L DI+G
Sbjct: 575 LEKGLIPNRTTYEIIKEEMMEKGFLPDIEG 604
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 133/341 (39%), Gaps = 51/341 (14%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L K G+ A +V++ M+ + + +D K + K L E +
Sbjct: 237 INGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVE 296
Query: 143 NRY-----TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N+ T+ L++ +CK+ AL +FE+M V +N+L G+ +
Sbjct: 297 NKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNE 356
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+ L+++M N+ + +TY + Y ++ +F + + T++ L
Sbjct: 357 AKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTP-NVITFNTLL 415
Query: 258 SIYVKAELFEKA----ELALKK----------------------------LEEMKPRDRK 285
Y K E+A ++ L+K L EM+ R K
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVK 475
Query: 286 A----YHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLN----AIDI 336
A Y+ LIS +C R+ +L P++ +Y +LL A+++
Sbjct: 476 ADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNL 535
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
KQ E E R + ++ +V+I+ Y +K E+A + N
Sbjct: 536 RKQM--EKEGRWA--NVVTYNVLIQGYCRKGKLEDANGLLN 572
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 118/285 (41%), Gaps = 32/285 (11%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
++ N L+ Y + T L F++ + ++ + ++ N L + ++ +
Sbjct: 154 GQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGG 213
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW------T 251
V + +M +R IS + +T+ + + ++ V +D W
Sbjct: 214 VEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV-------DDMKVWGFWPNVV 266
Query: 252 TYSNLASIYVK----AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV 306
TY+ L Y K +++ KA+ LK++ E K + ++ LI +C NL A +V
Sbjct: 267 TYNTLIDGYCKMGRVGKMY-KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKV 325
Query: 307 WGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
+ ++S PT +Y L+ L ++ K +E S ++ + +I Y +
Sbjct: 326 FEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCK 385
Query: 366 KDMYEEAALIFNNAKKRA------------NASARFFKSRESFMI 398
K + EEA +F+N K+ + +F K E+F++
Sbjct: 386 KKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLL 430
>gi|225425981|ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 603
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTY 147
G LE+++ M++ ++ S F ++ AK G+ AA K ++ L + TY
Sbjct: 343 GLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTY 402
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+++N YC+ + +A +F +M++ F VA++++ MY + G+ + LV +MK+
Sbjct: 403 ASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKE 462
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAEL 265
R + Y M + + ++ VE+++ EM + D+ +Y+++ S Y KA
Sbjct: 463 RGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDR---VSYTSVISAYSKAGD 519
Query: 266 FE 267
FE
Sbjct: 520 FE 521
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/349 (18%), Positives = 135/349 (38%), Gaps = 46/349 (13%)
Query: 88 KFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--K 142
K Y + + + ESRK+ FS + + + K A ++F +++ +
Sbjct: 233 KIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILE 292
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y +L+ + + A LF + +E K L + F L MY+ G E+ +V
Sbjct: 293 DSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTLEIV 352
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASIYV 261
MK I + + + + ++ + +V+ E+ CE TY+++ ++Y
Sbjct: 353 KAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPG--QVTYASIINVYC 410
Query: 262 KAELFEKAELALKKLE--------------------------------EMKPRDRK---- 285
+ EL+ KAE+ ++E +MK R +
Sbjct: 411 RMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVW 470
Query: 286 AYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
Y+ L+ ++ NL V ++W +K P SY ++ A +K + + + E+
Sbjct: 471 VYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEF 530
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA-SARFFKS 392
D +A +++ + + +E + + K R ++S
Sbjct: 531 RMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRS 579
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 135/320 (42%), Gaps = 9/320 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME D++ Y V +L K G+ A ++++ M R + + + +
Sbjct: 358 MEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRR 417
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A + FN + A Y+Y ++ Y K E+AL FEKM + + + A N
Sbjct: 418 LDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNA 477
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE- 243
+G+ + + + N + +S D++TY + M+ YS ID ++ EM +E
Sbjct: 478 SLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEG 537
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDA 302
CE ++L KA ++A +L+++K Y+ LI+ L
Sbjct: 538 CEPD--IIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLK 595
Query: 303 VNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
++G +K S PP ++ LL L K +A+D+ + F S D+ + II
Sbjct: 596 ALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIY 655
Query: 362 AYLQKDMYEEAALIFNNAKK 381
+++ A ++ KK
Sbjct: 656 GLIKEGRAGYAFWFYHQMKK 675
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 13/240 (5%)
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
LL C +TE AL LF +M N +N L + + + +++ L N+M R
Sbjct: 797 GLLGCN----ITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCR 852
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
+ +T+ + + + N I+ ++YE+ + + TY L +KA +
Sbjct: 853 GCKPNIITHNIIISALVKSNSINKALDLYYEIISG-DFSPTPCTYGPLIGGLLKA---GR 908
Query: 269 AELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLV 323
+E A+K EEM K Y+ LI+ + N++ A + ++K P SY +
Sbjct: 909 SEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTI 968
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
L++ L +D FEE + D +++I + EEA +F+ K R
Sbjct: 969 LVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRG 1028
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 129/339 (38%), Gaps = 49/339 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL+ + T + L E+M+ L N + + R G+ + ++ M
Sbjct: 229 TYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTM 288
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ D +TY V + + +D + ++ +M R +++
Sbjct: 289 EDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKM--------RASSH------------ 328
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVL 324
KP D Y L+S + N +L+ V R W +++ + P +Y +L
Sbjct: 329 --------------KP-DLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTIL 373
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRAN 384
++AL K +D + R ++ + +I L +EA +FNN +
Sbjct: 374 VEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGV 433
Query: 385 ASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTV----DTFFRFFE 440
A + S F+ YY + L + E AL ++ R + ++ + + E
Sbjct: 434 APTAY--SYVLFIDYYGK-------LGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAE 484
Query: 441 EEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
+ + + F + D Y++++K Y AG++
Sbjct: 485 MGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQI 523
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 130/288 (45%), Gaps = 14/288 (4%)
Query: 66 AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF-AVYLDLTA 122
A I++ + V+ +YC V+S+ + ++ ALEV EW+ R H A L +
Sbjct: 144 ADILDARLVQMTPTDYCFVVKSVGQ-ESWQRALEVFEWLNLRHWHSPNARMVAAILGVLG 202
Query: 123 KTNGIAAAEKYFNGLSEYAKNRY-TYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ N + A + F +R Y A++ Y + +A L + M + + + ++
Sbjct: 203 RWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLIS 262
Query: 182 FNNLSTMYLRLG--QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
FN L L+ G P L++ ++ + D +TY + + S +++DG +VF +
Sbjct: 263 FNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFED 322
Query: 240 M-CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP--RDRKAYHFLISLYCN 296
M + C+ W TY+ + S+Y + L +AE +L E+K D Y+ L+ +
Sbjct: 323 MEAHRCQPDL-W-TYNAMISVYGRCGLAAEAERLFMEL-ELKGFFPDAVTYNSLLYAFAR 379
Query: 297 TSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
N + V V+ + K F +Y ++ K +D+ Q +++
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 101/242 (41%), Gaps = 4/242 (1%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLN 152
A+E+++ + + + + L ++ + + A K F + + + +TY A+++
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
Y + + A LF +++ F + V +N+L + R EKV+ + QM++
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA-ELFEKAEL 271
D +TY + Y +D +++ +M TY+ L KA E A L
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 272 ALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAK 330
+ L+ + Y LI Y + + +L+S P N +Y V+L L +
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Query: 331 LN 332
N
Sbjct: 521 GN 522
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 136/378 (35%), Gaps = 54/378 (14%)
Query: 64 LNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAK 123
L I G + D L + S GR+ A E++E+++ + L K
Sbjct: 597 LKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCK 656
Query: 124 TNGIAAA-EKYFNGLSEYA---KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNT 179
N ++AA ++YF + + Y LL+C A +F + +
Sbjct: 657 VNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASE 716
Query: 180 VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
++ +Y +LG PE +VNQ + + F+
Sbjct: 717 SVCKSMVVVYCKLGFPETAHQVVNQAETKG---------------------------FHF 749
Query: 240 MCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM-KPRDRKAYHFLISLYCNTS 298
C+ Y+++ Y K +L++KAE + L + + D K ++ L+S Y
Sbjct: 750 ACS--------PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG 801
Query: 299 NLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
+ ++ + P PT S +LL AL ++ L EE + DM
Sbjct: 802 CYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQ------DMGFKI 855
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRANASA-------RFFKSRESFMIYYLRSRQLDLAL 410
L D + A IF K ++ A R ++ + R R ++ +
Sbjct: 856 SKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMV 915
Query: 411 NEMEAALSEAKQFHWRPM 428
+EME A + + W M
Sbjct: 916 SEMEEANFKVELAIWNSM 933
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 110/266 (41%), Gaps = 6/266 (2%)
Query: 65 NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
N + +G + + + + +L GR V+E ++ S + + LD A+
Sbjct: 811 NTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARA 870
Query: 125 NGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
I +K ++ + + Y Y ++ CK A + +M+E F +
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N++ MY + +K + ++K+ + D TY + Y + + +M N
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN 990
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLD 301
D + TY +L S + K + E+AE ++L + DR YH ++ + ++ +
Sbjct: 991 LGLDP-KLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 302 AVNRVWGILKSTF--PPTNTSYLVLL 325
++ ++K+ P T +L+++
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMV 1075
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 105/265 (39%), Gaps = 40/265 (15%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK + D+ Y + K G + ALE+ E M R + + + + +K
Sbjct: 278 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 337
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ +K F+ + Y AL+N + +RA + +M++ + + V +N
Sbjct: 338 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 397
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L LG+ ++ R L+++M +R I D +TY + YS D+ R+ EM N+
Sbjct: 398 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 457
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYC-NTSNLDAV 303
+ T Y+ LI C N DA
Sbjct: 458 FNPTLLT-----------------------------------YNALIQGLCKNGQGDDAE 482
Query: 304 NRVWGILKSTFPPTNTSYLVLLQAL 328
N V ++++ P +++Y+ L++ L
Sbjct: 483 NMVKEMVENGITPDDSTYISLIEGL 507
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 20/307 (6%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRK--MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL- 137
+C R GR + AL+++ M R YT + + K + A K F+ +
Sbjct: 155 FCSR-----GRVQAALDIMREMRERGGIAPNQYT-YGTVISGWCKVGRVDEAVKVFDEML 208
Query: 138 --SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL-GQ 194
E Y AL+ YC + + AL ++M E + + TVA NL L + G+
Sbjct: 209 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFMDGR 267
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ LV +M + ++ D TY + + + ++ +F M R T +
Sbjct: 268 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR---GVRATVVT 324
Query: 255 NLASIYV---KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL- 310
A IY K ++ E +L + + D Y+ LI+ + + N+D + G +
Sbjct: 325 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 384
Query: 311 KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYE 370
K P + +Y L++ L L +D ++ +E R D+ + +I Y K +
Sbjct: 385 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444
Query: 371 EAALIFN 377
+A I N
Sbjct: 445 DALRIRN 451
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 117/310 (37%), Gaps = 21/310 (6%)
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
A L+ L + A ALF M L+ T FN + G+P + L+ QM +
Sbjct: 84 ASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP 143
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
N +TY + + + + EM TY + S + K ++
Sbjct: 144 NA----VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDE 199
Query: 269 AELALKKL---EEMKPRDRKAYHFLISLYCNTSNLDAV----NRVWGILKSTFPPTNTSY 321
A ++ E+KP + Y+ LI YC+ LD +R +++ T +Y
Sbjct: 200 AVKVFDEMLTKGEVKP-EAVMYNALIGGYCDQGKLDTALLYRDR---MVERGVAMTVATY 255
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
+L+ AL + EE + + D+ +++I + ++ ++A IF N +
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEE 441
R R + +IY L + + E + EA + RP V +
Sbjct: 316 RG---VRATVVTYTALIYALSKKG---QVQETDKLFDEAVRRGIRPDLVLYNALINSHST 369
Query: 442 EKDVDGAEEF 451
++D A E
Sbjct: 370 SGNIDRAFEI 379
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 124/290 (42%), Gaps = 9/290 (3%)
Query: 94 HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTYGALL 151
H L ++ M +H ++ F++ + AK + A F+ + + N TYG ++
Sbjct: 359 HGL--LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
CK E A+ FE+M + + + +N+L + +K + L+ +M R I
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGIC 476
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
LD + + + S+ + E++F M K TYS L Y A ++A
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMV-RIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 272 ALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQAL 328
L + MKP D Y+ LI+ YC S + DA+ + S P +Y ++LQ L
Sbjct: 536 LLASMVSVGMKP-DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+ K+ + + ++ ++I+ + ++ +EA +F N
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 103/263 (39%), Gaps = 22/263 (8%)
Query: 129 AAEKYFNGLSEYAKNRY-----TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
A +K L+ KN TY ++++ YC + A+ +KM + V +N
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+L + G+ + R + + M +R + + TY +Q Y+ + EM
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA-------TKGALVEMHGL 361
Query: 244 CEDKCRWTTYSN------LASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYC 295
+ R + N L Y K ++A L K+ + + P D Y +I + C
Sbjct: 362 LDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-DTVTYGTVIGILC 420
Query: 296 NTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
+ + DA+ ++ P N Y L+ +L + D K+ E R D
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480
Query: 355 LADVIIRAYLQKDMYEEAALIFN 377
+ II ++ ++ E+ +F+
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFD 503
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 9/247 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKM--DELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N ++Y LL C E ++ AL L + M D + V++ + + + G +K
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
++M R I + +TY + + +D V M N CR TY+++
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR--TYNSIVHG 278
Query: 260 YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPP 316
Y + ++A LKK+ + ++P D Y+ L+ C +++ + K P
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEP-DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
T+Y LLQ A A+ + + + + ++I AY ++ ++A L+F
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 377 NNAKKRA 383
+ +++
Sbjct: 398 SKMRQQG 404
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 115/292 (39%), Gaps = 13/292 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ SL F ++ A E+I M R + F +D K + +EK F+ +
Sbjct: 451 IHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 510
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY L++ YC + A L M + + V +N L Y ++ + E
Sbjct: 511 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV 570
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M+ +S D +TY + +Q + ++ + E + +TY+ +
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI-TESGTQLELSTYNIILHGL 629
Query: 261 VKAELFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-F 314
K L ++A L L L+ + + ++ +I D ++ L +
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQ----LETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
P +Y ++ + L + ++ L F E + + R+ + I+R LQ+
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 120/274 (43%), Gaps = 11/274 (4%)
Query: 70 EGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
+ K ++ D++ Y V+ L + G HAL+V+ M H + + ++ K I
Sbjct: 281 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNI 340
Query: 128 AAAEKYFNG--LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
+ A N + Y + +T+ +++ YCK L + AL L E+M + + +N++
Sbjct: 341 SDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSV 400
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-- 243
+ G+ ++V +M + + +TY + ++++ +N ++ V M +
Sbjct: 401 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDA 302
D +++ L + + + A L +KL+E ++ LI Y + N+
Sbjct: 461 VPDT---ISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQM 517
Query: 303 VNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAID 335
+++G ++ + P +Y VL+ K +D
Sbjct: 518 AEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVD 551
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 134/331 (40%), Gaps = 27/331 (8%)
Query: 61 TGALNAYIME-GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
+GAL A +++ G +V K +R L + GR A+ ++E M++ + D Y
Sbjct: 134 SGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDA----YIAPDVVTYNT 189
Query: 120 LT---AKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
L K + + A +Y + + +TY +++ YCK M + A L +
Sbjct: 190 LMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKG 249
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
F+ + V + +L G E+ L N+ + +++ D + Y ++ I
Sbjct: 250 FVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 309
Query: 235 RVFYEMCNECEDKCR---WTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLI 291
+V EM ED C WT + + + + A + + + D ++ +I
Sbjct: 310 QVMNEM---VEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMI 366
Query: 292 SLYCNTSNLDA----VNRVW--GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
YC LD+ V R+W GI P +Y +L L K + + FEE
Sbjct: 367 DGYCKRLKLDSALQLVERMWMYGI-----APDAITYNSVLNGLCKAGKAKEVNETFEEMI 421
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ + +++I + + + EEA+ +
Sbjct: 422 LKGCRPNAITYNILIENFCKINQLEEASGVI 452
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 10/277 (3%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + ++++ + ME + + + V + + A++YFN
Sbjct: 80 EDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSRXITPDVITYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +T ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDALRLXEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P D + LIS C NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLQAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEE 343
+ + P Y VL++ K AI++L + E+
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAGQYDKAINLLDKLIEK 355
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 130/288 (45%), Gaps = 14/288 (4%)
Query: 66 AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF-AVYLDLTA 122
A I++ + V+ +YC V+S+ + ++ ALEV EW+ R H A L +
Sbjct: 144 ADILDARLVQMTPTDYCFVVKSVGQ-ESWQRALEVFEWLNLRHWHSPNARMVAAILGVLG 202
Query: 123 KTNGIAAAEKYFNGLSEYAKNRY-TYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ N + A + F +R Y A++ Y + +A L + M + + + ++
Sbjct: 203 RWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLIS 262
Query: 182 FNNLSTMYLRLG--QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
FN L L+ G P L++ ++ + D +TY + + S +++DG +VF +
Sbjct: 263 FNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFED 322
Query: 240 M-CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP--RDRKAYHFLISLYCN 296
M + C+ W TY+ + S+Y + L +AE +L E+K D Y+ L+ +
Sbjct: 323 MEAHRCQPDL-W-TYNAMISVYGRCGLAAEAERLFMEL-ELKGFFPDAVTYNSLLYAFAR 379
Query: 297 TSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
N + V V+ + K F +Y ++ K +D+ Q +++
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 101/242 (41%), Gaps = 4/242 (1%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLN 152
A+E+++ + + + + L ++ + + A K F + + + +TY A+++
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
Y + + A LF +++ F + V +N+L + R EKV+ + QM++
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA-ELFEKAEL 271
D +TY + Y +D +++ +M TY+ L KA E A L
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 272 ALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAK 330
+ L+ + Y LI Y + + +L+S P N +Y V+L L +
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Query: 331 LN 332
N
Sbjct: 521 GN 522
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 136/378 (35%), Gaps = 54/378 (14%)
Query: 64 LNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAK 123
L I G + D L + S GR+ A E++E+++ + L K
Sbjct: 597 LKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCK 656
Query: 124 TNGIAAA-EKYFNGLSEYA---KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNT 179
N ++AA ++YF + + Y LL+C A +F + +
Sbjct: 657 VNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASE 716
Query: 180 VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
++ +Y +LG PE +VNQ + + F+
Sbjct: 717 SVCKSMVVVYCKLGFPETAHQVVNQAETKG---------------------------FHF 749
Query: 240 MCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM-KPRDRKAYHFLISLYCNTS 298
C+ Y+++ Y K +L++KAE + L + + D K ++ L+S Y
Sbjct: 750 ACS--------PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG 801
Query: 299 NLDAVNRVWGILKSTFP-PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
+ ++ + P PT S +LL AL ++ L EE + DM
Sbjct: 802 CYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQ------DMGFKI 855
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRANASA-------RFFKSRESFMIYYLRSRQLDLAL 410
L D + A IF K ++ A R ++ + R R ++ +
Sbjct: 856 SKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMV 915
Query: 411 NEMEAALSEAKQFHWRPM 428
+EME A + + W M
Sbjct: 916 SEMEEANFKVELAIWNSM 933
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 110/266 (41%), Gaps = 6/266 (2%)
Query: 65 NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
N + +G + + + + +L GR V+E ++ S + + LD A+
Sbjct: 811 NTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARA 870
Query: 125 NGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
I +K ++ + + Y Y ++ CK A + +M+E F +
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N++ MY + +K + ++K+ + D TY + Y + + +M N
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN 990
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLD 301
D + TY +L S + K + E+AE ++L + DR YH ++ + ++ +
Sbjct: 991 LGLDP-KLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 302 AVNRVWGILKSTF--PPTNTSYLVLL 325
++ ++K+ P T +L+++
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMV 1075
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 136/325 (41%), Gaps = 17/325 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K D++ Y + L K G+ ALE++E M + ++ + + +D +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A++ F+ + E N Y AL+N CK+ ERA L E+M + + + +N
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ + R+G+ + + + M R S D + Y + + + +F M +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM--DM 178
Query: 245 EDK---CRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNT 297
D+ TY+ L + + EK + A+K +++ + D Y+ ++
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRV---EKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARK 235
Query: 298 SNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
SN+D ++ ++ S P +Y ++L ++ + + +EE + S D+ L
Sbjct: 236 SNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLC 295
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKK 381
+ +I + ++A + K
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSK 320
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 101/257 (39%), Gaps = 19/257 (7%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKN 143
L K + A +V+E M + + LD KTN + A + F+ + + A +
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
+Y +LN CK A LF++M E K + + V FN L + G+ ++ + L++
Sbjct: 362 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 421
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
M + N+ D +T M D R+F M + T L V A
Sbjct: 422 VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVE------KGTVADVLPHNIVLA 475
Query: 264 ELFEKAELA---------LKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKST 313
L + +LA +K E P D Y L++ +D AV+ + S
Sbjct: 476 GLCREGKLAQALLFFKSMVKSDGEFSP-DVVTYTTLVNALIEAGRVDQAVDYFQQMTGSG 534
Query: 314 FPPTNTSYLVLLQALAK 330
P +Y L+ L K
Sbjct: 535 CAPDYVAYNTLMNGLRK 551
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 111/272 (40%), Gaps = 8/272 (2%)
Query: 115 AVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
++ L L K+N + AE+ F + S A N TY +L+ +C+ R L L+E+M E
Sbjct: 227 SILLGLARKSN-MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE 285
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+F + + N + M + + + ++ +M + D +TY + + N +D
Sbjct: 286 KRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDK 345
Query: 233 VERVFYEMC-NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFL 290
+F M N C +YS + + K A + ++ E K D ++ L
Sbjct: 346 AHELFSTMVDNGCAPD--IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNIL 403
Query: 291 ISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS 349
+ C LD + ++ + P + L+ L + D + F+ + +
Sbjct: 404 MDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGT 463
Query: 350 SYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
D+ ++++ ++ +A L F + K
Sbjct: 464 VADVLPHNIVLAGLCREGKLAQALLFFKSMVK 495
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 170/406 (41%), Gaps = 28/406 (6%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNG--IAAAEKYFNGL 137
+ S K G A+ + + ME + M +YT LD K + + E NG
Sbjct: 302 ISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGC 361
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N TY AL+ + +A+F++ F+ + V +N L ++ + G +
Sbjct: 362 K---PNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSE 418
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
V + +MK+ + TY+ + SYS D +++ M E +TY+ +
Sbjct: 419 VSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMM-EAGIYPDVSTYNAVL 477
Query: 258 SIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTF 314
S + +E+AE ++EE KP D +Y L+ Y N LD + + I
Sbjct: 478 SALARGGRWEQAEKLFAEMEERDCKP-DEYSYSSLLHAYANAKRLDKMKALSDDIYSERI 536
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P N L+ +K+N + ++ F E + S D+ + + ++ Y + M +
Sbjct: 537 EPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEK 596
Query: 375 IFNNAKKRA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVD 433
I + K+ A N SA + S + ++ SR D + E L+E K RP + + +
Sbjct: 597 ILSLMKESAINLSAATYNS-----LMHMYSRLGD--CEKCENILTEIKSSGVRPDRYSYN 649
Query: 434 TFFRFFEEEKDVDGAEEFCKVLKSLNC----LDFSAYSLLIKTYIA 475
T + + + +E ++ + C D Y++ +K+Y++
Sbjct: 650 TVIYAYGRKGQM---KEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 692
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 12/207 (5%)
Query: 120 LTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+ +K N +A AEK F L + + + A+++ Y K M + + M E
Sbjct: 549 VNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINL 608
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ +N+L MY RLG EK ++ ++K + D +Y + +Y + R+F
Sbjct: 609 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 668
Query: 238 YEMCNECED-KCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLY 294
EM +C K TY+ YV +FE+A ++ + + KP +R Y+ ++ Y
Sbjct: 669 SEM--KCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNER-TYNSIVEGY 725
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTSY 321
C L I S P + Y
Sbjct: 726 CRNGKLTDAK----IFVSNLPQLHPGY 748
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 139/340 (40%), Gaps = 55/340 (16%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE--KYFNGLSEY 140
V + + GR+R A+ V M + + + V L + +K + E + + E+
Sbjct: 161 VSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKM-AVPWKEVVELVASMKEH 219
Query: 141 --AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
A +RYTY L++C + + + A +F++M F + V FN+L +Y + + ++
Sbjct: 220 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 279
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
++ +M ERV C TY++L S
Sbjct: 280 IEVIQEM----------------------------ERV------GCPPSV--VTYNSLIS 303
Query: 259 IYVKAELFEKAELALKK---LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTF 314
YVK L E+A +ALK+ ++ MKP D Y LIS +DA + ++++
Sbjct: 304 SYVKDGLLEQA-VALKQEMEVKGMKP-DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGC 361
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P +Y L++ + F+E+ S D+ + ++ + Q + E +
Sbjct: 362 KPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSG 421
Query: 375 IFNNAKKRANASARFFKSRE---SFMIYYLRSRQLDLALN 411
+F KK A + R+ S + Y R DLA+
Sbjct: 422 VFKEMKK-----AGYIPERDTYVSLISSYSRCGLFDLAMQ 456
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y R TY +L++ Y + + + A+ ++++M E + +N + + R G+ E+
Sbjct: 431 YIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAE 490
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW--------- 250
L +M++R+ D +Y + +Y++ +D ++ + ++ +E + W
Sbjct: 491 KLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 550
Query: 251 TTYSNLA-------------------------SIYVKAELFEKAELALKKLEEMKPRDRK 285
+ +NLA SIY K + K E L ++E
Sbjct: 551 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 610
Query: 286 A-YHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
A Y+ L+ +Y + + + +KS+ P SY ++ A + + + F E
Sbjct: 611 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 670
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ D+ ++ +++Y+ M+EEA
Sbjct: 671 MKCSGLKPDVVTYNIFVKSYVSNSMFEEA 699
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 170/406 (41%), Gaps = 28/406 (6%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNG--IAAAEKYFNGL 137
+ S K G A+ + + ME + M +YT LD K + + E NG
Sbjct: 320 ISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGC 379
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N TY AL+ + +A+F++ F+ + V +N L ++ + G +
Sbjct: 380 K---PNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSE 436
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
V + +MK+ + TY+ + SYS D +++ M E +TY+ +
Sbjct: 437 VSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMM-EAGIYPDVSTYNAVL 495
Query: 258 SIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTF 314
S + +E+AE ++EE KP D +Y L+ Y N LD + + I
Sbjct: 496 SALARGGRWEQAEKLFAEMEERDCKP-DEYSYSSLLHAYANAKRLDKMKALSDDIYSERI 554
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P N L+ +K+N + ++ F E + S D+ + + ++ Y + M +
Sbjct: 555 EPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEK 614
Query: 375 IFNNAKKRA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVD 433
I + K+ A N SA + S + ++ SR D + E L+E K RP + + +
Sbjct: 615 ILSLMKESAINLSAATYNS-----LMHMYSRLGD--CEKCENILTEIKSSGVRPDRYSYN 667
Query: 434 TFFRFFEEEKDVDGAEEFCKVLKSLNC----LDFSAYSLLIKTYIA 475
T + + + +E ++ + C D Y++ +K+Y++
Sbjct: 668 TVIYAYGRKGQM---KEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 710
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 12/207 (5%)
Query: 120 LTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+ +K N +A AEK F L + + + A+++ Y K M + + M E
Sbjct: 567 VNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINL 626
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ +N+L MY RLG EK ++ ++K + D +Y + +Y + R+F
Sbjct: 627 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 686
Query: 238 YEMCNECED-KCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLY 294
EM +C K TY+ YV +FE+A ++ + + KP +R Y+ ++ Y
Sbjct: 687 SEM--KCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNER-TYNSIVEGY 743
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTSY 321
C L I S P + Y
Sbjct: 744 CRNGKLTDAK----IFVSNLPQLHPGY 766
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 139/340 (40%), Gaps = 55/340 (16%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE--KYFNGLSEY 140
V + + GR+R A+ V M + + + V L + +K + E + + E+
Sbjct: 179 VSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKM-AVPWKEVVELVASMKEH 237
Query: 141 --AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
A +RYTY L++C + + + A +F++M F + V FN+L +Y + + ++
Sbjct: 238 GVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 297
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
++ +M ERV C TY++L S
Sbjct: 298 IEVIQEM----------------------------ERV------GCPPSV--VTYNSLIS 321
Query: 259 IYVKAELFEKAELALKK---LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTF 314
YVK L E+A +ALK+ ++ MKP D Y LIS +DA + ++++
Sbjct: 322 SYVKDGLLEQA-VALKQEMEVKGMKP-DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGC 379
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P +Y L++ + F+E+ S D+ + ++ + Q + E +
Sbjct: 380 KPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSG 439
Query: 375 IFNNAKKRANASARFFKSRE---SFMIYYLRSRQLDLALN 411
+F KK A + R+ S + Y R DLA+
Sbjct: 440 VFKEMKK-----AGYIPERDTYVSLISSYSRCGLFDLAMQ 474
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y R TY +L++ Y + + + A+ ++++M E + +N + + R G+ E+
Sbjct: 449 YIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAE 508
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW--------- 250
L +M++R+ D +Y + +Y++ +D ++ + ++ +E + W
Sbjct: 509 KLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 568
Query: 251 TTYSNLA-------------------------SIYVKAELFEKAELALKKLEEMKPRDRK 285
+ +NLA SIY K + K E L ++E
Sbjct: 569 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 628
Query: 286 A-YHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
A Y+ L+ +Y + + + +KS+ P SY ++ A + + + F E
Sbjct: 629 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 688
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ D+ ++ +++Y+ M+EEA
Sbjct: 689 MKCSGLKPDVVTYNIFVKSYVSNSMFEEA 717
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 140/345 (40%), Gaps = 16/345 (4%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N +TY +++ KE E + + E+M + AFN + + R EK R
Sbjct: 7 AANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKARE 66
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ M + DN++Y + + + + +D ++ EM + YS+L
Sbjct: 67 VYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTP-SMQAYSSLVRAL 125
Query: 261 VKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTN 318
KA + A L + + DR ++ LI C + DA R + K P
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
Y VLL L ++ F E +S S D+ + ++ A + EE +F
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF-- 243
Query: 379 AKKRANASARFFKSRESF--MIYYL-RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTF 435
A +A + + +F +I+ L R+ +L+ AL E+ ++ EA +P + T T
Sbjct: 244 ---EAMRAAGYVPNVITFSTLIHGLCRTGELEKAL-EVFGSMLEAG---CKPNKYTYTTL 296
Query: 436 FR-FFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
EK + E F K+ ++ D AY+ LI Y G +
Sbjct: 297 ISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSM 341
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 127/326 (38%), Gaps = 10/326 (3%)
Query: 64 LNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAK 123
L+ +M G+T VR+L K R HA + + M H F + +
Sbjct: 103 LSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQ 162
Query: 124 TNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ A + F + ++ N Y LL+ C E+A LF +M + V
Sbjct: 163 AGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVT 222
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
+N L + + E+ L M+ + +T+ + +++ VF M
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 282
Query: 242 NECEDKCRWT--TYSNLASIYVKAE-LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTS 298
E C+ TY+ L S +AE + + EL K + P D AY+ LI+ YC
Sbjct: 283 ---EAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRG 339
Query: 299 NLDAVNRVWGILK--STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
++D +++ + + PT ++ L+ KL + + E ++ + D
Sbjct: 340 SMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTY 399
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKKR 382
++I + +EA ++ +++
Sbjct: 400 RILIAGLSRATKLDEALEVYKQMREK 425
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 149/365 (40%), Gaps = 19/365 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ L K G A+ ++ ME + +D K + A F+ +
Sbjct: 168 INGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGI 227
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ + +TY +L++ C + L +M K L + V F+ + + G+ +
Sbjct: 228 SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHE 287
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLAS 258
+V+ M QR + D +TY M + +++D +VF M + D +TT L +
Sbjct: 288 IVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT---LIN 344
Query: 259 IYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFP 315
Y K +KA +++ +E P D K Y+ L+ C+ L DA+ ++
Sbjct: 345 GYCKIHKIDKAMYLFEEMCRKEWIP-DTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQM 403
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P +Y +LL +L K ++ + E+ + D+++ ++II + E A +
Sbjct: 404 PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 463
Query: 376 FNN-AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
F+N + K + S + + MI+ L R L LNE E P T +T
Sbjct: 464 FSNLSSKGLHPSVWTY----NIMIHGLCKRGL---LNEANKLFMEMDGNDCSPDGCTYNT 516
Query: 435 FFRFF 439
R F
Sbjct: 517 IARGF 521
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 102/247 (41%), Gaps = 5/247 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N TYG L+N CK T A+ L M++ + V + ++ + Q +
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLA 257
L +QM + IS D TY + + +L + V + +M N D ++T +
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD-- 274
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPP 316
++ + ++ E E+ ++ D Y L+ +C S +D +V+ ++ + F P
Sbjct: 275 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 334
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY L+ K++ ID FEE + D + + ++ ++A +F
Sbjct: 335 DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALF 394
Query: 377 NNAKKRA 383
+ R
Sbjct: 395 HEMVARG 401
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 159/379 (41%), Gaps = 11/379 (2%)
Query: 66 AYIMEGKT--VRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAK 123
AY M G+ V ML +R G+ A E+ E M S+ + + + K
Sbjct: 304 AYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363
Query: 124 TNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+A + + + E A N TY LL+ +C+ M + A A+ ++M F N+
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG 423
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
+N + + G+ ++ LV +MK + D TY + + + +D E +F +
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNL 300
E TY+ L + + +++ LA + + P D +Y+ LI C N+
Sbjct: 484 EE-GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNV 542
Query: 301 D-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
D ++ + ++ P N SY +L+ L K + + +E ++ + D+ + +
Sbjct: 543 DRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 602
Query: 360 IRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMI-YYLRSRQLDLALNEMEAALS 418
I L K + AAL N +K N + + +I ++ + R LD A ++ A+S
Sbjct: 603 ING-LCKVGWTHAAL--NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVS 659
Query: 419 EAKQFHWRPMQVTVDTFFR 437
+ R + V F R
Sbjct: 660 GGIVPNERTWGMMVQNFVR 678
>gi|297738294|emb|CBI27495.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTY 147
G LE+++ M++ ++ S F ++ AK G+ AA K ++ L + TY
Sbjct: 281 GLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPGQVTY 340
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+++N YC+ + +A +F +M++ F VA++++ MY + G+ + LV +MK+
Sbjct: 341 ASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKE 400
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
R + Y M + + ++ VE+++ EM + R +Y+++ S Y KA FE
Sbjct: 401 RGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDR-VSYTSVISAYSKAGDFE 459
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 148/393 (37%), Gaps = 65/393 (16%)
Query: 88 KFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--K 142
K Y + + + ESRK+ FS + + + K A ++F +++ +
Sbjct: 171 KIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILE 230
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y +L+ + + A LF + +E K L + F L MY+ G E+ +V
Sbjct: 231 DSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEGLMERTLEIV 290
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASIYV 261
MK I + + + + ++ + +V+ E+ CE TY+++ ++Y
Sbjct: 291 KAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGCEPG--QVTYASIINVYC 348
Query: 262 KAELFEKAELALKKLE--------------------------------EMKPRDRK---- 285
+ EL+ KAE+ ++E +MK R +
Sbjct: 349 RMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVW 408
Query: 286 AYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
Y+ L+ ++ NL V ++W +K P SY ++ A +K + + + E+
Sbjct: 409 VYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKAGDFETCMRFYHEF 468
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA-SARFFKSRESFMIYYLRS 403
D +A +++ + + +E + + K R ++S
Sbjct: 469 RMNGGVIDRVIAGIMVGIFSKSGRVDELVKLLQDMKTEGTGLDERLYRS----------- 517
Query: 404 RQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
ALN + A Q R +Q + DT F
Sbjct: 518 -----ALNALRDA---GLQMQARWLQESFDTTF 542
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 5/188 (2%)
Query: 58 GSVTGALNAY-IMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G V AL+ + ME +R D++ Y V L GR+R A ++ M RK+ F
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 115 AVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
+D K AE+ +N + A N +TY +L+N +C E + A +F M+
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ VA+ +L + + + + + +M Q+ ++ + +TY +Q + + +
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 233 VERVFYEM 240
+ VF M
Sbjct: 371 AQEVFSHM 378
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 99/238 (41%), Gaps = 3/238 (1%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +++ CK AL+LF++M+ + V + +L G+ L+ M
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
+R I D +T+ + ++ E ++ EM TY++L + +
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI-RMSIAPNIFTYTSLINGFCMEGCV 298
Query: 267 EKAELALKKLEEMKP-RDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-SYLVL 324
++A +E D AY LI+ +C +D +++ + NT +Y L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
+Q ++ ++ ++ F SR ++R +V++ ++A +IF + +KR
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 9/292 (3%)
Query: 91 RYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAKNRYTY 147
++ AL++ M ESR + S DF L++ AK + L + + YT
Sbjct: 52 QFNEALDLFTHMVESRPLP-SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L+NC+C+ A + KM +L F + V F +L + + E+ +VNQM +
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
I D + Y + S ++ +F +M N + Y++L + + +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY-GIRPDVVMYTSLVNGLCNSGRWR 229
Query: 268 KAELALKKL--EEMKPRDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYLVL 324
A+ L+ + ++KP D ++ LI + LDA +++ + P +Y L
Sbjct: 230 DADSLLRGMTKRKIKP-DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ +D +Q F E++ D+ +I + + ++A IF
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 116/277 (41%), Gaps = 10/277 (3%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDLWVLMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFN 139
Query: 136 GL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ R+T+ ++ + E A FE M + + +N L Y R+
Sbjct: 140 KMLNEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDITPDVITYNTLINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D + EM K TY
Sbjct: 200 KMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A+ LK++ + + P D + LIS C NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISGQCKAGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKL----NAIDILKQCFEE 343
+ + P Y VL++ K A+++L + E+
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAEKYDKAVNLLDKLIEK 355
>gi|302811145|ref|XP_002987262.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
gi|300144897|gb|EFJ11577.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
Length = 564
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 169/404 (41%), Gaps = 31/404 (7%)
Query: 91 RYRHALEVIEWMESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGA 149
R + + ++W+ + K + F Y + LDL ++ + + F L + ++ Y
Sbjct: 46 RNKVVFKALDWVANEKVIPFGYHETLQRLDLCSRCHHVTRTLLLFRRLPKQWRSEDAYCI 105
Query: 150 LLNCYCKELMTERALALFEK-MDELKFLG--NTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
LL Y K M E A EK M EL+ +G + ++ + + Y G + +V ++K
Sbjct: 106 LLELYYKRDMLEDA----EKTMQELRGIGIKSLQPYHLMLSFYKLRGMEMRFERMVTEIK 161
Query: 207 QRNISLDNLTYIVWMQSY-SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++LD Y + + + S D+ VE V EM K +A IY+++ L
Sbjct: 162 GSGLALDRSFYTILLAARDSFGGDMVAVEDVLAEMEGRGL-KLDAVGCLAVAGIYLRSGL 220
Query: 266 FEKAELALKKLEEMKPRDRKAYHF---------LISLYCNTSNLDAVNRVWGILKSTFPP 316
K+E L++LE + K+ F +++++ + DAV+R+W ++ +
Sbjct: 221 RHKSERVLQRLE----KSLKSGEFKDSNSIRRRMLAMFGKLGDRDAVDRIWHSIERSAST 276
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL-QKDMYEEAALI 375
T ++ ++A ++ +D + + C+S + RL + + + Q D+ AL+
Sbjct: 277 TVEDFIFGIEAFGRVGKMDEAEDMY--MRVGCNSCNPRLHNAFLAVLVEQGDVIRAVALV 334
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHW-RPMQVTVDT 434
R S + + YL++ + A E+ S + W RP T+
Sbjct: 335 ERMKGVRCLLSTVTY---HLLIKVYLKAGDVSRATLAFESLRSAFGKLEWPRPSSETLAV 391
Query: 435 FFRFFEEEKDVDGAEEFCKV-LKSLNCLDFSAYSLLIKTYIAAG 477
FF DV +E K ++ L + + L + Y G
Sbjct: 392 MLEFFVGIGDVQASERLVKKWMEDGFPLSAAVFHSLFRVYAKGG 435
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 6/257 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
+R L + G+ A V + M S+ + +D K I AA + F +
Sbjct: 277 IRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGL 336
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N Y AL++ CK + AL + +M + +T+ +N L + G E R
Sbjct: 337 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 396
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASI 259
++M + D TY + + + + D VF +M + C TY L S
Sbjct: 397 FFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPN--VVTYGTLISG 454
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
K KA L + ++E P D Y L+ C + L+ ++ ++ + +
Sbjct: 455 LCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS 514
Query: 319 TSYLVLLQALAKLNAID 335
+ L+ L K N +D
Sbjct: 515 QTRTRLIFHLCKANRVD 531
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 114/305 (37%), Gaps = 15/305 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT----NGIAAAEKYF-NGL 137
+ L K G+ A++ E + + +D AK + +A EK NG
Sbjct: 137 LHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGC 196
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
+ TY ALLN CK E A+ L K+ + + V + +L + + +
Sbjct: 197 TPTIA---TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 253
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNL 256
L +M R + LD + Y ++ I V+ M ++ C T S +
Sbjct: 254 AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD--VVTLSTM 311
Query: 257 ASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF 314
KA A K +E + P + Y LI C +D + +K F
Sbjct: 312 IDGLCKAGRIGAAVRIFKSMEARGLAP-NEVVYSALIHGLCKARKMDCALEMLAQMKKAF 370
Query: 315 -PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P +Y +L+ L K ++ + F+E D+ ++++ + + + A
Sbjct: 371 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAAC 430
Query: 374 LIFNN 378
+F++
Sbjct: 431 GVFDD 435
>gi|358345906|ref|XP_003637015.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358347053|ref|XP_003637577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502950|gb|AES84153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503512|gb|AES84715.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 823
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 131/327 (40%), Gaps = 33/327 (10%)
Query: 92 YRHALEVIEWMESRKMH-FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYG 148
++ AL + EW + + + + + + + K E +N ++E TYG
Sbjct: 122 WKRALMIFEWFKKKGCYELNVIHYNIMFWILGKERKWRVLESLWNEMNENGVVPVNSTYG 181
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV---------- 198
L++ Y K + E ALA +M + V + +Y R G+ +K
Sbjct: 182 TLIDVYSKGGLIEEALAWLLRMQSEGMEPDEVTMGVVVQLYKRAGEFQKAEEFFLRWSRG 241
Query: 199 ---------------RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
R + N++ N+ L++ TY + +Y I V +F M +
Sbjct: 242 EPLRIEIDHNPADTRRHVCNEVSHVNVCLNSHTYNTLIDTYGKAGQIRVVYEIFARMIKQ 301
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLD 301
T++ + +Y + LK++EE++ P D + Y+ LIS+ +N++
Sbjct: 302 GVVLTT-VTFNTMIHLYGNHGRIREVSSLLKRMEELRCLP-DTRTYNILISVLVKHNNIN 359
Query: 302 AVNRVWGILKSTF-PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
+ + +K F P SY LL A + + ++ +E + R D +
Sbjct: 360 LATKYFAKMKEAFLEPDVVSYRTLLYAYSTRKMVQEAEEIVQEMDERGLKIDEFTQSALT 419
Query: 361 RAYLQKDMYEEAALIFNNAKKRANASA 387
R Y++ +M E++ L F + N ++
Sbjct: 420 RMYVESNMLEKSWLWFMRFHQDGNITS 446
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 122/305 (40%), Gaps = 11/305 (3%)
Query: 77 DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG 136
DML +R + G A++V+E M + T + ++ K + A K N
Sbjct: 287 DML---IRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLND 343
Query: 137 LSEYAKNRYT--YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ Y N T Y +L C+ + A L +M N V FN + + G
Sbjct: 344 MGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGL 403
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
E+ L+ QM + ++ +TY + + ID +F M C K TY+
Sbjct: 404 IEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM--PC--KPNTITYT 459
Query: 255 NLASIYVKAELFEK-AELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKS 312
L + AE + AEL + L P + ++ L+S +C L +A+ V +++
Sbjct: 460 TLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEH 519
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y LL + K + + + S+ S D+ II ++D EEA
Sbjct: 520 GCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEA 579
Query: 373 ALIFN 377
+F+
Sbjct: 580 VQLFH 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 131/344 (38%), Gaps = 19/344 (5%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
N TY LL C+ E+A+A+ ++M N V +N + R G+ + R L
Sbjct: 176 PNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREL 235
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASI 259
+N++ D ++Y ++ D VE +F EM E C T+ L
Sbjct: 236 LNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEM---MEKNCMPNEVTFDMLIRF 292
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPT 317
+ + + E+A L+++ E + + +I+ C +D ++ + S P
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY +L+ L + D K+ E + C ++ + I QK + E+A ++
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTF-NTFICILCQKGLIEQAIMLI 411
Query: 377 NNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
+ ++ Y +++AL + +P +T T
Sbjct: 412 EQMSEHGCTVG---------VVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLL 462
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
+ +DGA E + +C + +++L+ + G L
Sbjct: 463 TGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFL 506
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 16/213 (7%)
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
A+N L Y R G + R L+ M ++ D TY ++ + + +M
Sbjct: 113 AYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDM 169
Query: 241 CNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYC 295
C+ TY+ L + FE+ A+ L+EM+ + + Y+ +I+ C
Sbjct: 170 LRRGCQPN--VVTYTVLLEAMCRNSGFEQ---AMAVLDEMRAKGCTPNIVTYNVIINGMC 224
Query: 296 NTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEE-WESRCSSYDM 353
+D + L S F P SY LL+ L D +++ F E E C ++
Sbjct: 225 REGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEV 284
Query: 354 RLADVIIRAYLQKDMYEEAALIFNNAKKRANAS 386
D++IR + + M E A + + A+
Sbjct: 285 TF-DMLIRFFCRGGMVERAIQVLEQMTEHGCAT 316
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLT---AKTNGIAAAEKYFN--GLSEYAKNRYTY 147
R A+E + ++ K F D VY L + I+ AE F ++ + N YTY
Sbjct: 232 RRAVEAQSFFDNLKHKFE-PDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTY 290
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+++ C+ RA +F +M + N+V FNNL ++LR G+ EKV + NQMK+
Sbjct: 291 SIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKR 350
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASIYVKAELF 266
+ D +TY ++++ +++ +V M N+C ++++ + K++
Sbjct: 351 LRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNA--SSFNPIFRCIAKSQDV 408
Query: 267 EKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAV 303
A +++E+ KP + Y+ L+ ++ + D +
Sbjct: 409 NGAHRMFARMKEVGCKP-NTVTYNILMRMFAVPKSADMI 446
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 111/280 (39%), Gaps = 19/280 (6%)
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM----CNECEDKCRWTTYSNL 256
L++ MK RN+ + +T+ + ++ Y F M CN +SN+
Sbjct: 170 LIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCN-----ADIIAFSNV 224
Query: 257 ASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFP 315
SI K +A+ L+ D Y L+ +C ++ V+ +K +
Sbjct: 225 ISILCKKRRAVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGIS 284
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P +Y +++ AL + I F E ++ C+ + + +IR +L+ E+
Sbjct: 285 PNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNN-LIRVHLRAGRTEKVLQ 343
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
++N K R +A + + + D L E L+ + P + +
Sbjct: 344 VYNQMK-RLRCAADLITYN-----FLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNP 397
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTY 473
FR + +DV+GA +K + C + Y++L++ +
Sbjct: 398 IFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMF 437
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 26/286 (9%)
Query: 80 EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
EYC + G+ A +V + + R + + + + + + ++ AE GL E
Sbjct: 221 EYC-----RDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAE----GLLE 271
Query: 140 YAKNRY------TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
K + T+ L++ C ++AL+ EK+ + V +N L + + ++G
Sbjct: 272 RMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVG 331
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
V LV +M+ R IS +TY + M ++ +DI+ +F+ M + T
Sbjct: 332 NSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYG 391
Query: 254 SNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSN-LDAVNRVWGILK 311
+ + +K + E ++L +E ++P D Y+ +I+ YC N A+ + ++K
Sbjct: 392 VLIHGLCIKGNMVEASKLYKSMVEMHLQPNDV-IYNTMINGYCKECNSYKALKFLEEMVK 450
Query: 312 STFPPTNTSYLVLLQALAK----LNAIDILKQCFEEW----ESRCS 349
+ P SY+ +Q L K + A +LK+ E ES CS
Sbjct: 451 NGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPESLCS 496
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 130/304 (42%), Gaps = 42/304 (13%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-- 140
+++ + G E++ ME+ + + + + ++ + I A+ F+ + +
Sbjct: 114 IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGL 173
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N+Y Y ++N + K+ + L++KM + L N +N+L T Y R G+
Sbjct: 174 AANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFK 233
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ +++ +R ++ + +TY + I G+ CR S
Sbjct: 234 VFDEISKRGVACNAVTYNIL---------IGGL--------------CRKGQVS------ 264
Query: 261 VKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
KAE L++++ + P R ++ L+ CNT LD A++ + + PT
Sbjct: 265 -------KAEGLLERMKRAHINPTTR-TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPT 316
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y +L+ +K+ ++ + E E R S +++ +++ D E+A +F+
Sbjct: 317 LVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFH 376
Query: 378 NAKK 381
K+
Sbjct: 377 LMKR 380
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 38/225 (16%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N YTY +L+ YC++ A +F+++ + N V +N L R GQ K L+
Sbjct: 211 NLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLL 270
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDID------------------------------- 231
+MK+ +I+ T+ + M + +D
Sbjct: 271 ERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKV 330
Query: 232 GVERVFYEMCNECEDKC---RWTTYSNLASIYVKAELFEKA--ELALKKLEEMKPRDRKA 286
G V E+ E ED+ TY+ L + +V+++ EKA L K + P D+
Sbjct: 331 GNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVP-DQHT 389
Query: 287 YHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAK 330
Y LI C N+ ++++ +++ P + Y ++ K
Sbjct: 390 YGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCK 434
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK + D+ Y + K G + ALE+ E M R + + + + +K
Sbjct: 647 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 706
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ +K F+ + Y AL+N + +RA + +M++ + + V +N
Sbjct: 707 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 766
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L LG+ ++ R L+++M +R I D +TY + YS D+ R+ EM N+
Sbjct: 767 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 826
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRD 283
+ TY+ L K + AE +K++ E + P D
Sbjct: 827 FNPT-LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 866
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 20/307 (6%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRK--MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL- 137
+C R GR + AL+++ M R YT + + K + A K F+ +
Sbjct: 524 FCSR-----GRVQAALDIMREMRERGGIAPNQYT-YGTVISGWCKVGRVDEAVKVFDEML 577
Query: 138 --SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL-GQ 194
E Y AL+ YC + + AL ++M E + + TVA NL L + G+
Sbjct: 578 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFMDGR 636
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ LV +M + ++ D TY + + + ++ +F M R T +
Sbjct: 637 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR---GVRATVVT 693
Query: 255 NLASIYV---KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL- 310
A IY K ++ E +L + + D Y+ LI+ + + N+D + G +
Sbjct: 694 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 753
Query: 311 KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYE 370
K P + +Y L++ L L +D ++ +E R D+ + +I Y K +
Sbjct: 754 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813
Query: 371 EAALIFN 377
+A I N
Sbjct: 814 DALRIRN 820
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 117/310 (37%), Gaps = 21/310 (6%)
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
A L+ L + A ALF M L+ T FN + G+P + L+ QM +
Sbjct: 453 ASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP 512
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
N +TY + + + + EM TY + S + K ++
Sbjct: 513 NA----VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDE 568
Query: 269 AELALKKL---EEMKPRDRKAYHFLISLYCNTSNLDAV----NRVWGILKSTFPPTNTSY 321
A ++ E+KP + Y+ LI YC+ LD +R +++ T +Y
Sbjct: 569 AVKVFDEMLTKGEVKP-EAVMYNALIGGYCDQGKLDTALLYRDR---MVERGVAMTVATY 624
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
+L+ AL + EE + + D+ +++I + ++ ++A IF N +
Sbjct: 625 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 684
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEE 441
R R + +IY L + + E + EA + RP V +
Sbjct: 685 RG---VRATVVTYTALIYALSKKG---QVQETDKLFDEAVRRGIRPDLVLYNALINSHST 738
Query: 442 EKDVDGAEEF 451
++D A E
Sbjct: 739 SGNIDRAFEI 748
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 26/286 (9%)
Query: 80 EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
EYC + G+ A +V + + R + + + + + + ++ AE GL E
Sbjct: 221 EYC-----RDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAE----GLLE 271
Query: 140 YAKNRY------TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
K + T+ L++ C ++AL+ EK+ + V +N L + + ++G
Sbjct: 272 RMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVG 331
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
V LV +M+ R IS +TY + M ++ +DI+ +F+ M + T
Sbjct: 332 NSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYG 391
Query: 254 SNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSN-LDAVNRVWGILK 311
+ + +K + E ++L +E ++P D Y+ +I+ YC N A+ + ++K
Sbjct: 392 VLIHGLCIKGNMVEASKLYKSMVEMHLQPNDV-IYNTMINGYCKECNSYKALKFLEEMVK 450
Query: 312 STFPPTNTSYLVLLQALAK----LNAIDILKQCFEEW----ESRCS 349
+ P SY+ +Q L K + A +LK+ E ES CS
Sbjct: 451 NGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPESLCS 496
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 130/304 (42%), Gaps = 42/304 (13%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-- 140
+++ + G E++ ME+ + + + + ++ + I A+ F+ + +
Sbjct: 114 IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGL 173
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N+Y Y ++N + K+ + L++KM + L N +N+L T Y R G+
Sbjct: 174 AANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFK 233
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ +++ +R ++ + +TY + I G+ CR S
Sbjct: 234 VFDEISKRGVACNAVTYNIL---------IGGL--------------CRKGQVS------ 264
Query: 261 VKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
KAE L++++ + P R ++ L+ CNT LD A++ + + PT
Sbjct: 265 -------KAEGLLERMKRAHINPTTR-TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPT 316
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y +L+ +K+ ++ + E E R S +++ +++ D E+A +F+
Sbjct: 317 LVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFH 376
Query: 378 NAKK 381
K+
Sbjct: 377 LMKR 380
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 38/225 (16%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N YTY +L+ YC++ A +F+++ + N V +N L R GQ K L+
Sbjct: 211 NLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLL 270
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDID------------------------------- 231
+MK+ +I+ T+ + M + +D
Sbjct: 271 ERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKV 330
Query: 232 GVERVFYEMCNECEDKC---RWTTYSNLASIYVKAELFEKA--ELALKKLEEMKPRDRKA 286
G V E+ E ED+ TY+ L + +V+++ EKA L K + P D+
Sbjct: 331 GNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVP-DQHT 389
Query: 287 YHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAK 330
Y LI C N+ ++++ +++ P + Y ++ K
Sbjct: 390 YGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCK 434
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N Y + L+N +CKE A +F+++ + V+FN L Y ++G +
Sbjct: 236 FPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGF 295
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLA 257
L + M++ D TY + + N +DG R+FYEMC + +TT +
Sbjct: 296 RLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGH 355
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAV-NRVWGILKSTFPP 316
S + +L + E K L + D Y+ L++ +C +L A N V G+++ P
Sbjct: 356 SRNGQIDLMK--ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 317 TNTSYLVLLQALAKLNAID 335
+Y L+ + +D
Sbjct: 414 DKVTYTTLIDGFCRGGDVD 432
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 5/240 (2%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY ++ Y K + AL FEKM N VA N + G+ + + +
Sbjct: 436 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 495
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
+K + D++TY + M+ YS + +ID ++ EM C + S + ++Y KA+
Sbjct: 496 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLY-KAD 554
Query: 265 LFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYL 322
++A +++EM KP L L N +A+ G+++ PP ++
Sbjct: 555 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 614
Query: 323 VLLQALAKLNAIDI-LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
L L K + + + LK F+ + C D+ + II ++ +EA F+ KK
Sbjct: 615 TLFDCLCKNDEVTLALKMLFKMMDMGCVP-DVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 673
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 13/258 (5%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
Y + +LR G+ V + M+ R + + + G+ A + E+
Sbjct: 125 YMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREF 184
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ---P 195
N Y+Y L++ K A+ ++ +M G + S++ + LG+
Sbjct: 185 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM---ILDGFRPSLQTYSSLMVGLGKRRDI 241
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYS 254
E V L+ +M+ + + T+ + ++ I+ + M +E C TY+
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV--VTYT 299
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGIL-KS 312
L A + A+ K++ + + DR Y L+ + + +LD+VN+ W + K
Sbjct: 300 VLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD 359
Query: 313 TFPPTNTSYLVLLQALAK 330
P ++ +L+ AL K
Sbjct: 360 GHVPDVVTFTILVDALCK 377
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 100/238 (42%), Gaps = 2/238 (0%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L+ + M E A +F ++ + + +N L Y + G+ +++ + +M
Sbjct: 789 TYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM 848
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ +T+ + + ++D ++Y++ ++ + TY L K+
Sbjct: 849 SAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 908
Query: 266 FEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLV 323
+A+ + + + R A Y+ LI+ + DA ++ ++K P +Y V
Sbjct: 909 LYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 968
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
L+ L + +D F E + + D+ ++II + EEA ++FN KK
Sbjct: 969 LVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKK 1026
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK + D+ Y + K G + ALE+ E M R + + + + +K
Sbjct: 652 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 711
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ +K F+ + Y AL+N + +RA + +M++ + + V +N
Sbjct: 712 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 771
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L LG+ ++ R L+++M +R I D +TY + YS D+ R+ EM N+
Sbjct: 772 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 831
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRD 283
+ TY+ L K + AE +K++ E + P D
Sbjct: 832 FNPT-LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 871
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 20/307 (6%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRK--MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL- 137
+C R GR + AL+++ M R YT + + K + A K F+ +
Sbjct: 529 FCSR-----GRVQAALDIMREMRERGGIAPNQYT-YGTVISGWCKVGRVDEAVKVFDEML 582
Query: 138 --SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL-GQ 194
E Y AL+ YC + + AL ++M E + + TVA NL L + G+
Sbjct: 583 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFMDGR 641
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ LV +M + ++ D TY + + + ++ +F M R T +
Sbjct: 642 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR---GVRATVVT 698
Query: 255 NLASIYV---KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL- 310
A IY K ++ E +L + + D Y+ LI+ + + N+D + G +
Sbjct: 699 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 758
Query: 311 KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYE 370
K P + +Y L++ L L +D ++ +E R D+ + +I Y K +
Sbjct: 759 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818
Query: 371 EAALIFN 377
+A I N
Sbjct: 819 DALRIRN 825
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 117/310 (37%), Gaps = 21/310 (6%)
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
A L+ L + A ALF M L+ T FN + G+P + L+ QM +
Sbjct: 458 ASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP 517
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
N +TY + + + + EM TY + S + K ++
Sbjct: 518 NA----VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDE 573
Query: 269 AELALKKL---EEMKPRDRKAYHFLISLYCNTSNLDAV----NRVWGILKSTFPPTNTSY 321
A ++ E+KP + Y+ LI YC+ LD +R +++ T +Y
Sbjct: 574 AVKVFDEMLTKGEVKP-EAVMYNALIGGYCDQGKLDTALLYRDR---MVERGVAMTVATY 629
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
+L+ AL + EE + + D+ +++I + ++ ++A IF N +
Sbjct: 630 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 689
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEE 441
R R + +IY L + + E + EA + RP V +
Sbjct: 690 RG---VRATVVTYTALIYALSKKG---QVQETDKLFDEAVRRGIRPDLVLYNALINSHST 743
Query: 442 EKDVDGAEEF 451
++D A E
Sbjct: 744 SGNIDRAFEI 753
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 7/198 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLG--NTVAFNNLSTMYLRLGQPEKVRP 200
N TY L++ +CK AL LF+ + N V FN L + + + E
Sbjct: 209 NAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFE 268
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASI 259
LV QMK R++ D TY M V RVF EM E C TY+ L
Sbjct: 269 LVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPS--VVTYTTLVHA 326
Query: 260 YVKAELFEKAELALKKL-EEMKPRDRKAYHFLI-SLYCNTSNLDAVNRVWGILKSTFPPT 317
+ KA + A+ ++ + + P D Y L+ L+ N A IL+ PP
Sbjct: 327 HCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPC 386
Query: 318 NTSYLVLLQALAKLNAID 335
Y L++ K +D
Sbjct: 387 AVVYSALVRGCCKAALVD 404
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 108/266 (40%), Gaps = 12/266 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L K GR A+E M R + D + L + + A F G+ + +
Sbjct: 10 IAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI-QCSP 68
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDE-LKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+ T L+N +C+ + ++AL LF +M++ + + + Y ++ + ++ R L
Sbjct: 69 SVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQL 128
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+ + S D + + + +D ++ +M + K ++ + +
Sbjct: 129 LEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFC 186
Query: 262 KAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS---TFPPT 317
KA +A L+ L M + Y LI +C + NL +++ +L S P
Sbjct: 187 KAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPN 246
Query: 318 NTSYLVLLQALAKLN----AIDILKQ 339
++ L+ L K + A +++KQ
Sbjct: 247 VVTFNALISGLCKADRLEHAFELVKQ 272
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 7/198 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLG--NTVAFNNLSTMYLRLGQPEKVRP 200
N TY L++ +CK AL LF+ + N V FN L + + + E
Sbjct: 209 NAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFE 268
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASI 259
LV QMK R++ D TY M V RVF EM E C TY+ L
Sbjct: 269 LVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPS--VVTYTTLVHA 326
Query: 260 YVKAELFEKAELALKKL-EEMKPRDRKAYHFLI-SLYCNTSNLDAVNRVWGILKSTFPPT 317
+ KA + A+ ++ + + P D Y L+ L+ N A IL+ PP
Sbjct: 327 HCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPC 386
Query: 318 NTSYLVLLQALAKLNAID 335
Y L++ K +D
Sbjct: 387 AVVYSALVRGCCKAALVD 404
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 108/266 (40%), Gaps = 12/266 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L K GR A+E M R + D + L + + A F G+ + +
Sbjct: 10 IAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI-QCSP 68
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDE-LKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+ T L+N +C+ + ++AL LF +M++ + + + Y ++ + ++ R L
Sbjct: 69 SVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQL 128
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+ + S D + + + +D ++ +M + K ++ + +
Sbjct: 129 LEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFC 186
Query: 262 KAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS---TFPPT 317
KA +A L+ L M + Y LI +C + NL +++ +L S P
Sbjct: 187 KAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPN 246
Query: 318 NTSYLVLLQALAKLN----AIDILKQ 339
++ L+ L K + A +++KQ
Sbjct: 247 VVTFNALISGLCKADRLEHAFELVKQ 272
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 171/406 (42%), Gaps = 28/406 (6%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNG--IAAAEKYFNGL 137
+ S K G A+ + + ME + + +YT LD K + + E NG
Sbjct: 320 ISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGC 379
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N TY AL+ + +A+F+++ F+ + V +N L ++ + G +
Sbjct: 380 K---PNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSE 436
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
V + +MK+ + TY+ + SYS D +++ M E +TY+ +
Sbjct: 437 VSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMM-EAGIYPDVSTYNAVL 495
Query: 258 SIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTF 314
S + +E+AE ++EE KP D +Y L+ Y N LD + + I
Sbjct: 496 SALARGGRWEQAEKLFAEMEERDCKP-DEYSYSSLLHAYANAKRLDKMKALSDDIYSERI 554
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P N L+ +K+N + ++ F E + S D+ + + ++ Y + M +
Sbjct: 555 EPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEK 614
Query: 375 IFNNAKKRA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVD 433
I + K+ A N SA + S + ++ SR D + E L+E K RP + + +
Sbjct: 615 ILSLMKESAINLSAATYNS-----LMHMYSRLGD--CEKCENILTEIKSSGVRPDRYSYN 667
Query: 434 TFFRFFEEEKDVDGAEEFCKVLKSLNC----LDFSAYSLLIKTYIA 475
T + + + +E ++ + C D Y++ +K+Y++
Sbjct: 668 TVIYAYGRKGQM---KEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 710
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 12/207 (5%)
Query: 120 LTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+ +K N +A AEK F L + + + A+++ Y K M + + M E
Sbjct: 567 VNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINL 626
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ +N+L MY RLG EK ++ ++K + D +Y + +Y + R+F
Sbjct: 627 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 686
Query: 238 YEMCNECED-KCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLY 294
EM +C K TY+ YV +FE+A ++ + + KP +R Y+ ++ Y
Sbjct: 687 SEM--KCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNER-TYNSIVEGY 743
Query: 295 CNTSNLDAVNRVWGILKSTFPPTNTSY 321
C L I S P + Y
Sbjct: 744 CRNGKLTDAK----IFVSNLPQLHPGY 766
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 163/389 (41%), Gaps = 23/389 (5%)
Query: 97 EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIA---AAEKYFNGL--SEYAKNRYTYGALL 151
EV+E + S K H D Y L + A A + F+ + S + ++ T+ +LL
Sbjct: 226 EVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLL 285
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
+ Y K + A+ + ++M+ + + V +N+L + Y++ G E+ L +M+ + I
Sbjct: 286 DVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIK 345
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASIYVKAELFEKAE 270
D +TY + ID + EM N C K TY+ L ++ F +
Sbjct: 346 PDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGC--KPNLCTYNALIKMHGVRGKFPEMM 403
Query: 271 LALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGIL----KSTFPPTNTSYLVLL 325
+L D ++ L++++ + LD+ V G+ K+ + P +Y+ L+
Sbjct: 404 AVFDELRSAGFVPDIVTWNTLLAVF-GQNGLDS--EVSGVFKEMKKAGYIPERDTYVSLI 460
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA 385
+ ++ D+ Q ++ D+ + ++ A + +E+A +F ++R
Sbjct: 461 SSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCK 520
Query: 386 SARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDV 445
+ S S + Y +++LD +M+A + P V T + ++
Sbjct: 521 PDEY--SYSSLLHAYANAKRLD----KMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNL 574
Query: 446 DGAEEFCKVLKSLNC-LDFSAYSLLIKTY 473
AE+ L+ C LD + + ++ Y
Sbjct: 575 AEAEKAFLELRQKRCSLDINVLNAMVSIY 603
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y R TY +L++ Y + + + A+ ++++M E + +N + + R G+ E+
Sbjct: 449 YIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAE 508
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW--------- 250
L +M++R+ D +Y + +Y++ +D ++ + ++ +E + W
Sbjct: 509 KLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 568
Query: 251 TTYSNLA-------------------------SIYVKAELFEKAELALKKLEEMKPRDRK 285
+ +NLA SIY K + K E L ++E
Sbjct: 569 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 628
Query: 286 A-YHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
A Y+ L+ +Y + + + +KS+ P SY ++ A + + + F E
Sbjct: 629 ATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSE 688
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ D+ ++ +++Y+ M+EEA
Sbjct: 689 MKCSGLKPDVVTYNIFVKSYVSNSMFEEA 717
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 132/333 (39%), Gaps = 13/333 (3%)
Query: 110 SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALF 167
S +F +L AK + N + + N Y+ L+NC C+ + ++++
Sbjct: 92 SVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVL 151
Query: 168 EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHL 227
KM +L + + FN L G+ ++ L N+M +R + ++Y +
Sbjct: 152 GKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKT 211
Query: 228 NDIDGVERVFYEM-CNECEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRK 285
+ VF +M N C K TYS + K L A E + +E P +
Sbjct: 212 GNTSMAVDVFKKMEQNGC--KPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269
Query: 286 AYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
Y+ ++ +CN L+ R++ ++ P ++ +L+ L K + + FE
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSR 404
+ D+ + ++ Y + + EA +F ++ A S + Y +SR
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA--HSYNILINGYCKSR 387
Query: 405 QLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
++D E ++ L+E P VT T +
Sbjct: 388 RMD----EAKSLLAEMYHKALNPDTVTYSTLMQ 416
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 116/297 (39%), Gaps = 38/297 (12%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
V G+ A + + M R + + F + +D K ++ A F ++E
Sbjct: 275 VHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGV 334
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY AL++ YC + + A +FE M ++N L Y + + ++ +
Sbjct: 335 EPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKS 394
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+ +M + ++ D +TY MQ L +F EMC+ + + NL +
Sbjct: 395 LLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCS-------YGPHPNLVT-- 445
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNT 319
Y L+ +C +LD ++ +K P
Sbjct: 446 --------------------------YVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIV 479
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
Y +L++ + +++ K+ F + + D+R V+I+ L++ + +EA +F
Sbjct: 480 HYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLF 536
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 105/265 (39%), Gaps = 40/265 (15%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK + D+ Y + K G + ALE+ E M R + + + + +K
Sbjct: 205 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ 264
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ +K F+ + Y AL+N + +RA + +M++ + + V +N
Sbjct: 265 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 324
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L LG+ ++ R L+++M +R I D +TY + YS D+ R+ EM N+
Sbjct: 325 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 384
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYC-NTSNLDAV 303
+ T Y+ LI C N DA
Sbjct: 385 FNPTLLT-----------------------------------YNALIQGLCKNGQGDDAE 409
Query: 304 NRVWGILKSTFPPTNTSYLVLLQAL 328
N V ++++ P +++Y+ L++ L
Sbjct: 410 NMVKEMVENGITPDDSTYISLIEGL 434
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 125/304 (41%), Gaps = 14/304 (4%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRK--MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL- 137
+C R GR + AL+++ M R YT + + K + A K F+ +
Sbjct: 82 FCSR-----GRVQAALDIMREMRERGGIAPNQYT-YGTVISGWCKVGRVDEAVKVFDEML 135
Query: 138 --SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL-GQ 194
E Y AL+ YC + + AL ++M E + + TVA NL L + G+
Sbjct: 136 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFMDGR 194
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ LV +M + ++ D TY + + + ++ +F M T S
Sbjct: 195 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 254
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KST 313
+ ++ K ++ E +L + + D Y+ LI+ + + N+D + G + K
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P + +Y L++ L L +D ++ +E R D+ + +I Y K ++A
Sbjct: 315 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 374
Query: 374 LIFN 377
I N
Sbjct: 375 RIRN 378
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 119/311 (38%), Gaps = 23/311 (7%)
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
A L+ L + A ALF M L+ T FN + G+P + L+ QM +
Sbjct: 11 ASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP 70
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
N +TY + + + + EM TY + S + K ++
Sbjct: 71 NA----VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDE 126
Query: 269 AELALKKL---EEMKPRDRKAYHFLISLYCNTSNLDAV----NRVWGILKSTFPPTNTSY 321
A ++ E+KP + Y+ LI YC+ LD +R +++ T +Y
Sbjct: 127 AVKVFDEMLTKGEVKP-EAVMYNALIGGYCDQGKLDTALLYRDR---MVERGVAMTVATY 182
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
+L+ AL + EE + + D+ +++I + ++ ++A IF N +
Sbjct: 183 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 242
Query: 382 RA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFE 440
R A+ + S +IY L + + E + EA + RP V +
Sbjct: 243 RGVRATVVTYTS----LIYALSKKG---QVQETDKLFDEAVRRGIRPDLVLYNALINSHS 295
Query: 441 EEKDVDGAEEF 451
++D A E
Sbjct: 296 TSGNIDRAFEI 306
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 123/309 (39%), Gaps = 12/309 (3%)
Query: 83 VRSLRKFGRYRHALEVI-EWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN--GLSE 139
VR L G R AL ++ +S T ++ K +A A + F+ L
Sbjct: 9 VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
A N TY AL++ Y E+ ALFE+M N +N L + R G+ E+ R
Sbjct: 69 LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L ++M R I + ++Y + + ++ M E + T++ L
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE-GTRPSIITFNLLVDG 187
Query: 260 YVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVWGILKS-TF 314
Y KA K AL +MK + Y+ LI+ +C ++ NR +K
Sbjct: 188 YGKA---GKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGL 244
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
PT +Y +L+ + A+ N + + E D V++RA + ++A
Sbjct: 245 EPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARK 304
Query: 375 IFNNAKKRA 383
+F + ++
Sbjct: 305 LFQSMGEKG 313
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELM 159
M+ R + + + + +D A+ N + A + G+ + + +TYG L+ C E
Sbjct: 239 MKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
+ A LF+ M E + V ++ + Y R G K L+ +M+Q+ + ++ +Y
Sbjct: 299 MKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASY 356
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 123/309 (39%), Gaps = 12/309 (3%)
Query: 83 VRSLRKFGRYRHALEVI-EWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN--GLSE 139
VR L G R AL ++ +S T ++ K +A A + F+ L
Sbjct: 9 VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
A N TY AL++ Y E+ ALFE+M N +N L + R G+ E+ R
Sbjct: 69 LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L ++M R I + ++Y + + ++ M E + T++ L
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE-GTRPSIITFNLLVDG 187
Query: 260 YVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVWGILKS-TF 314
Y KA K AL +MK + Y+ LI+ +C ++ NR +K
Sbjct: 188 YGKA---GKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGL 244
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
PT +Y +L+ + A+ N + + E D V++RA + ++A
Sbjct: 245 EPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARK 304
Query: 375 IFNNAKKRA 383
+F + ++
Sbjct: 305 LFQSMGEKG 313
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELM 159
M+ R + + + + +D A+ N + A + G+ + + +TYG L+ C E
Sbjct: 239 MKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
+ A LF+ M E + V ++ + Y R G K L+ +M+Q+ + ++ +Y
Sbjct: 299 MKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASY 356
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 5/239 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLG-NTVAFNNLSTMYLRLGQPEKVRPL 201
N TYGAL+N +CK E A L M +L+ +G N + FN + Y R G +K +
Sbjct: 272 NERTYGALINGFCKIGQIEAAEMLLTDM-QLRGVGHNQIIFNTMIDGYCRHGMVDKALEI 330
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
M++ I LD TY +N ++ +++ + M E + + +Y+ L SI+
Sbjct: 331 KAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIM-TENGVESNYVSYTTLISIHS 389
Query: 262 KAELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNT 319
K +A + +E R Y+ +I Y + ++ R + K P
Sbjct: 390 KEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVY 449
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+Y L+ +D+ + FEE + R + ++ +I ++ EEA ++N
Sbjct: 450 TYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDN 508
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G A + ME + S + V +D K+ I AE++ + + + Y
Sbjct: 390 KEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVY 449
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ +C + AL LFE+M + N VA+ L + + G+ E+ + M
Sbjct: 450 TYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNM 509
Query: 206 KQRNISLDNLTYIVWMQS 223
++ D+ Y + + S
Sbjct: 510 LAAGLTPDDTLYSMLVGS 527
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 14/263 (5%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTA---KTNGIAAAEKYFNGLSE--YAKNR 144
G+ A+ V+E M MH D AV+ + + + +AAA +F+ + + A +
Sbjct: 334 GQVSDAVRVVEDM---VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADG 390
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY AL+N C+ + A + ++M++ + V + L Y ++G+ + + N+
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M Q+ ++ + +TY D+ + +EMC++ + TY++L + KA
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE-LNIFTYNSLINGLCKAG 509
Query: 265 LFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSY 321
E+A + ++E +KP D Y +I C + LD A + + +L PT +Y
Sbjct: 510 NLEQAMRTMIDMDEAGLKP-DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTY 568
Query: 322 LVLLQALAKLNAIDILKQCFEEW 344
VL+ ++ K+ EW
Sbjct: 569 NVLMNGFCMSGRVEGGKRLL-EW 590
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 127/321 (39%), Gaps = 23/321 (7%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYI--------------MEGKTVRKDMLEYCV--RSLR 87
D++ KR L A G + T +N ME K + D + Y V
Sbjct: 379 DEMQKR--GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRY 145
K G+ A V M +++ + + D K + AA + + + N +
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+N CK E+A+ MDE + + + + + ++ L+ +M
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY-VKAE 264
+ I +TY V M + ++G +R+ M E TTY++L Y ++
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML-EKNIHPNTTTYNSLMKQYCIEKN 615
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLV 323
+ E+ L + + Y+ LI +C N+ +A+ +++ F T +SY
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675
Query: 324 LLQALAKLNAIDILKQCFEEW 344
L++ L K ++ FE+
Sbjct: 676 LIRLLNKKKKFTEARRLFEKM 696
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 4/223 (1%)
Query: 127 IAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
I A + F+ ++ + TYG +++ YC E A+ L +M N VA+ ++
Sbjct: 269 IKDAHQLFDEMAS-PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
+ GQ +V M + LD + M + D+ F EM +
Sbjct: 328 ALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM-QKRGL 386
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNR 305
TY+ L + +A ++AE L+++E+ D Y LI YC +
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446
Query: 306 VWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
V +++ P +Y L L K + + E S+
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 18/202 (8%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+++L GR + A ++ + M S D Y + ++ E LSE A
Sbjct: 260 LKALCTAGRIKDAHQLFDEMASPP------DVVTYGIMVHGYCTLSELETAIKLLSEMAA 313
Query: 143 -----NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N Y +++ C E A+ + E M + + F + + + R G
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK---CRWTTYS 254
R ++M++R ++ D +TY + ++ ERV EM EDK TY+
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM----EDKGLDVDAVTYT 429
Query: 255 NLASIYVKAELFEKAELALKKL 276
L Y K +A L K+
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKM 451
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 174/422 (41%), Gaps = 64/422 (15%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L + GR A+ V M R + + + Y AK IA A + F+ + + +
Sbjct: 22 ISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAY----AKNGRIANARELFDLMPQ--R 75
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N ++ +++ Y + E A LF++M F + ++ + T Y R+G+ EK R L
Sbjct: 76 NLVSWNSMIAGYLHNELVEDAARLFDRM----FKRDIYSWTLMITCYTRIGELEKARELF 131
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
N + + D + + Y+ +++F EM ++ W + + S Y K
Sbjct: 132 NLLPDKQ---DTVCRNALIAGYAKKRLFREAKKLFDEML--VKNVVSWNS---ILSGYTK 183
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYL 322
K +L L+ E M R+ +++ ++ Y +LD+ W K P S++
Sbjct: 184 N---GKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDS---AWMFFKKIPTPNVVSWV 237
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
+L A + + F E ++ ++ + +I AY++++ ++A +F ++
Sbjct: 238 TMLSGFAHYGRMTEARNLFNEMPTK----NLVSWNAMIGAYVRENQIDDAYKLFMEMPEK 293
Query: 383 ANAS-----------ARFFKSRE--SFMIY------------YLRSRQLDLALNEMEAAL 417
+ S + ++RE + M Y YL+S ++D A NE+ + +
Sbjct: 294 DSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEA-NEIFSQI 352
Query: 418 SEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAG 477
S W M R +E ++ + + C D +++ +I Y AG
Sbjct: 353 SVRDSVCWNSMITGYAHCGR----------TDEALRLFQEMVCKDMVSWNTMIAAYAQAG 402
Query: 478 KL 479
++
Sbjct: 403 QM 404
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 42/281 (14%)
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
A FN + KN ++ A++ Y +E + A LF +M E ++V++ + Y
Sbjct: 252 ARNLFNEMP--TKNLVSWNAMIGAYVRENQIDDAYKLFMEMPE----KDSVSWTAMINGY 305
Query: 190 LRLGQPEKVRPLVNQMKQRNISL---------------------------DNLTYIVWMQ 222
+R+G+ + R ++N M +NI+ D++ + +
Sbjct: 306 VRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMIT 365
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR 282
Y+H D R+F EM C+D W T + + Y +A +K AL+ EM+ R
Sbjct: 366 GYAHCGRTDEALRLFQEMV--CKDMVSWNT---MIAAYAQAGQMDK---ALEMFNEMQER 417
Query: 283 DRKAYHFLISLYC-NTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ +++ LI+ Y N +A+N + + P T+ + L+A A L A+++ Q
Sbjct: 418 NVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLH 477
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
D+ + + I+ Y + EA +F K +
Sbjct: 478 HLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNK 518
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 124/305 (40%), Gaps = 11/305 (3%)
Query: 77 DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG 136
DML VR + G A++V+E M + T + ++ K + A ++ N
Sbjct: 289 DML---VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNN 345
Query: 137 LSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ Y + + +Y +L C+ E A L ++M N V FN + + G
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
E+ L+ QM + ++ +TY + + +D +FY M C K TY+
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM--PC--KPNTITYT 461
Query: 255 NLASIYVKAE-LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKS 312
L + AE L AEL + L++ + ++ L+S +C +D A+ V +++
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y LL + + + S S D+ II ++D EEA
Sbjct: 522 GCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 373 ALIFN 377
+F+
Sbjct: 582 IKMFH 586
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/320 (16%), Positives = 120/320 (37%), Gaps = 43/320 (13%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA---------- 141
+ A+EV++ M ++ + + V ++ + + A ++ N LS Y
Sbjct: 196 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 255
Query: 142 ---------------------------KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
N T+ L+ +C+ M ERA+ + E+M
Sbjct: 256 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
NT N + + G+ + +N M S D ++Y ++ + +
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375
Query: 235 RVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLIS 292
+ EM + C T++ I + L E+A + ++++ E + Y+ L++
Sbjct: 376 ELLKEMVRKNCPPN--EVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVN 433
Query: 293 LYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
+C +D+ ++ + P +Y LL L +D + E + + +
Sbjct: 434 GFCVQGRVDSALELFYSMPCK--PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 491
Query: 353 MRLADVIIRAYLQKDMYEEA 372
+ +V++ + QK + +EA
Sbjct: 492 VVTFNVLVSFFCQKGLMDEA 511
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 93/238 (39%), Gaps = 13/238 (5%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL CK +A+ + ++M N V +N + R G+ + R +N++
Sbjct: 182 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 241
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVKA 263
D ++Y ++ + VE +F EM E C T+ L + +
Sbjct: 242 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM---MEKNCMPNEVTFDMLVRFFCRG 298
Query: 264 ELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+ E+ A++ LE+M A + +I+ C +D + + S P
Sbjct: 299 GMVER---AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 355
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY +L+ L + + K+ +E + + + I QK + E+A ++
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLI 413
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 67/386 (17%), Positives = 144/386 (37%), Gaps = 22/386 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+R L GR AL +++ M R S + V L+ K+ G A + + +
Sbjct: 152 IRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY ++N C+E + A ++ F +TV++ + + E V
Sbjct: 212 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 271
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M ++N + +T+ + ++ + ++ +V +M C T L +I
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH---GCAANT--TLCNIV 326
Query: 261 VKAELFE-KAELALKKLEEMK----PRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTF 314
+ + + + A + L M D +Y ++ C DA + +++
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
PP ++ + L + I+ E+ ++ + ++ + + + A
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+F + + N + + + + +LD A L+E Q P VT +
Sbjct: 447 LFYSMPCKPNTI-----TYTTLLTGLCNAERLDAA----AELLAEMLQKDCAPNVVTFNV 497
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNC 460
FF ++ +D A E + + C
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGC 523
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 98/253 (38%), Gaps = 16/253 (6%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A + Y L+ C+ T A + + + A+N L Y R GQ + R
Sbjct: 75 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 134
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASI 259
L+ M ++ D TY ++ + + +M + C+ TY+ L
Sbjct: 135 LIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPS--VVTYTVLLEA 189
Query: 260 YVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TF 314
K+ F + A++ L+EM+ + + Y+ +I+ C +D L S F
Sbjct: 190 VCKSTGFGQ---AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGF 246
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEE-WESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P SY +L+ L + +++ F E E C ++ D+++R + + M E A
Sbjct: 247 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF-DMLVRFFCRGGMVERAI 305
Query: 374 LIFNNAKKRANAS 386
+ A+
Sbjct: 306 QVLEQMSGHGCAA 318
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 130/325 (40%), Gaps = 13/325 (4%)
Query: 66 AYIMEG-KTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
A + EG K R + + +L + G+ A V E S + F+ + K+
Sbjct: 176 ALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKS 235
Query: 125 NGIAAAEKYFNGL--SEYAKNRYTYGALLN-CYCKELMTERALALFEKMDELKFLGNTVA 181
A K F + S N TY A+++ C + +R + +FE+M + +
Sbjct: 236 GYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRIT 295
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
+N+L + R G E R L N+M R I D TY + + +D + EM
Sbjct: 296 YNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMP 355
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNT 297
+ + TYS +A Y KA E A L EMK DR +Y+ L+S+Y
Sbjct: 356 GK-KILPNVVTYSTMADGYAKAGRLEDA---LNLYNEMKFLGIGLDRVSYNTLLSIYAKL 411
Query: 298 SNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
DA+ + S +Y LL K + + + F+E + ++
Sbjct: 412 GRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTY 471
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKK 381
+I Y + +YEEA +F K+
Sbjct: 472 STLIDVYSKGSLYEEAMEVFREFKQ 496
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 117/290 (40%), Gaps = 50/290 (17%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGA 149
++ +E+ E M + + L + ++ AA FN + + ++ +TY
Sbjct: 274 FKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNT 333
Query: 150 LLNCYCK--------ELM---------------------------TERALALFEKMDELK 174
LL+ CK E+M E AL L+ +E+K
Sbjct: 334 LLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLY---NEMK 390
Query: 175 FLG---NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
FLG + V++N L ++Y +LG+ E + +M + D +TY + Y +
Sbjct: 391 FLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFN 450
Query: 232 GVERVFYEMCNECEDKC--RWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYH 288
V RVF EM +D+ TYS L +Y K L+E+A ++ ++ + D Y
Sbjct: 451 EVTRVFKEM---KKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYS 507
Query: 289 FLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
LI+ C +D AV + + K P +Y ++ A + + L
Sbjct: 508 ELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFL 557
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 16/288 (5%)
Query: 81 YCVRSLRKFGR---YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN-- 135
+C LR +G + A+++ M+S + S F L + K A F+
Sbjct: 99 FCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEM 158
Query: 136 -GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
G + YT+ L+ +CK M + F++M + V +N L R G+
Sbjct: 159 CGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGK 218
Query: 195 PEKVRPLVNQM--KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT 252
+V M K +++S D +TY ++ Y +ID VF EM + K T
Sbjct: 219 VRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGL-KPNDIT 277
Query: 253 YSNLASIYVKAELFEKAELALKKLEEMKP--RDRKAYHFLISLYCNTSNLDAVNRVWGIL 310
Y+ L + + F+K + L + D Y+ L++ C+ N D +++ +
Sbjct: 278 YNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKM 337
Query: 311 KS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
K P + +Y VL++ L + + +Q F+ + S D+ L D
Sbjct: 338 KELKVQPDSATYSVLIRNLCQRGDFERAEQLFD----KLSDEDILLRD 381
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 94/235 (40%), Gaps = 43/235 (18%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKM-------------------------D 171
+ + + + TY L+ YC + + AL +FE+M D
Sbjct: 233 MKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFD 292
Query: 172 ELK-----------FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
++K F+ +T +N L G ++ + +MK+ + D+ TY V
Sbjct: 293 KIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVL 352
Query: 221 MQSYSHLNDIDGVERVFYEMCNEC----EDKCR--WTTYSNLASIYVKAELFEKAELALK 274
+++ D + E++F ++ +E +D C Y+ + K KAE +
Sbjct: 353 IRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFR 412
Query: 275 KLEEMKPRDRKAYHFLISLYCNTSNLDAVNR-VWGILKSTFPPTNTSYLVLLQAL 328
+L + +D +Y LI +C +A + + +L+ + P +Y++L+
Sbjct: 413 QLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGF 467
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 130/325 (40%), Gaps = 13/325 (4%)
Query: 66 AYIMEG-KTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
A + EG K R + + +L + G+ A V E S + F+ + K+
Sbjct: 176 ALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKS 235
Query: 125 NGIAAAEKYFNGL--SEYAKNRYTYGALLN-CYCKELMTERALALFEKMDELKFLGNTVA 181
A K F + S N TY A+++ C + +R + +FE+M + +
Sbjct: 236 GYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRIT 295
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
+N+L + R G E R L N+M R I D TY + + +D + EM
Sbjct: 296 YNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMP 355
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNT 297
+ + TYS +A Y KA E A L EMK DR +Y+ L+S+Y
Sbjct: 356 GK-KILPNVVTYSTMADGYAKAGRLEDA---LNLYNEMKFLGIGLDRVSYNTLLSIYAKL 411
Query: 298 SNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
DA+ + S +Y LL K + + + F+E + ++
Sbjct: 412 GRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTY 471
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKK 381
+I Y + +YEEA +F K+
Sbjct: 472 STLIDVYSKGSLYEEAMEVFREFKQ 496
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 117/290 (40%), Gaps = 50/290 (17%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGA 149
++ +E+ E M + + L + ++ AA FN + + ++ +TY
Sbjct: 274 FKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNT 333
Query: 150 LLNCYCK--------ELM---------------------------TERALALFEKMDELK 174
LL+ CK E+M E AL L+ +E+K
Sbjct: 334 LLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLY---NEMK 390
Query: 175 FLG---NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
FLG + V++N L ++Y +LG+ E + +M + D +TY + Y +
Sbjct: 391 FLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFN 450
Query: 232 GVERVFYEMCNECEDKC--RWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYH 288
V RVF EM +D+ TYS L +Y K L+E+A ++ ++ + D Y
Sbjct: 451 EVTRVFKEM---KKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYS 507
Query: 289 FLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
LI+ C +D AV + + K P +Y ++ A + + L
Sbjct: 508 ELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFL 557
>gi|145524846|ref|XP_001448245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415789|emb|CAK80848.1| unnamed protein product [Paramecium tetraurelia]
Length = 967
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 138/293 (47%), Gaps = 26/293 (8%)
Query: 70 EGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
+ ++++ D + Y ++ + R A+ + E M+ + + F LD K N +
Sbjct: 401 QSQSIQLDEITYNTLIKGCGRKKRLNEAISLFEEMKQIGIKPNRISFNSLLDSCVKCNKM 460
Query: 128 AAAEKYFNGL-SEYA--KNRYTYGALLNCYC------KELMTERALALFEKMDEL-KFLG 177
A +YF + +Y + +TY L+N EL+ RA+ L E++ E +F
Sbjct: 461 NVAWRYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELL--RAITLLEQIQETGQFKP 518
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ + +N+L ++ + +K L +MK ++I ++TY + +++Y +ND++G R+F
Sbjct: 519 DEILYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLNGAFRMF 578
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISL 293
EM + + TY L V+ + ++ AL+ +E+MK P + Y +I
Sbjct: 579 EEM-KQKKIPINDVTYGCLVDACVRNDRLDQ---ALQFIEQMKSQNLPINTVLYTTIIKG 634
Query: 294 YCNTSNLDAVNRVWGILKS---TFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
+C + + + + ++K T+P +Y LL L K ++ + F+E
Sbjct: 635 FCKLNQTEEAMKYFSLMKQNQRTYPNL-ITYNSLLDGLVKNGLMNQADKLFQE 686
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 7/265 (2%)
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
+D K N I + F + + + TYG L+ Y K A +FE+M + K
Sbjct: 527 IDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLNGAFRMFEEMKQKKI 586
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
N V + L +R + ++ + QMK +N+ ++ + Y ++ + LN + +
Sbjct: 587 PINDVTYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLYTTIIKGFCKLNQTEEAMK 646
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISL 293
F M TY++L VK L +A+ ++L E +KP D + L+
Sbjct: 647 YFSLMKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQELVESTIKP-DLITFSTLLKG 705
Query: 294 YCNTSNLDAVNR-VWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
+C N+ +N V +L P + ++L++ Q +++++ +
Sbjct: 706 HCRRGNMKRLNETVQTMLHYQINPDESLLQLILESCLNQQQYHNGVQIYDQFQHQIPQ-S 764
Query: 353 MRLADVIIRAYLQKDMYEEAALIFN 377
+L +IIR + Q A + N
Sbjct: 765 TQLLLIIIRLHSQDKQLSSAIPLLN 789
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 36/339 (10%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
++ +++ IM + + L + + +R + + + I M +D
Sbjct: 266 ISSSISQLIMPSENNKSQWLNFLLTFMRDNAKIQPTIVTINTM---------------ID 310
Query: 120 LTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCY--CKELMTERALALFEKMDELKF 175
K N A K F L + + +TY L+N + A LFE+ +
Sbjct: 311 QYFKNNQKDKAWKTFENLKLTSTKPDNFTYTTLINGLKNSDNMDLRLAFQLFEEYKQYN- 369
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ-RNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ + +N L + G + L+N+MKQ ++I LD +TY ++ ++
Sbjct: 370 QPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQSIQLDEITYNTLIKGCGRKKRLNEAI 429
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-----DRKAYHF 289
+F EM + K ++++L VK K +A + EEM+ + D Y
Sbjct: 430 SLFEEM-KQIGIKPNRISFNSLLDSCVKCN---KMNVAWRYFEEMRKQYGIFPDNFTYSI 485
Query: 290 LIS-LYCNTSNLDAVNRVWGILKST-----FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
L++ + N SN D + R +L+ F P Y L+ A K N I Q F+E
Sbjct: 486 LVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMQLFKE 545
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
+++ ++I+AY + + A +F K++
Sbjct: 546 MKNKSIEPSSVTYGILIKAYGKMNDLNGAFRMFEEMKQK 584
>gi|297845848|ref|XP_002890805.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336647|gb|EFH67064.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 21/151 (13%)
Query: 5 NQSRLISTGSYLVRQLCST----PTETVSQRIAAPTPFPTGNEDKLYKRLSA-------- 52
N R++++G +L ++ C+T P+ + APT D KR
Sbjct: 2 NFRRVMASGVHLWKRACTTAAALPSAGIKTSNTAPTAAAGVKVDDALKRAKVAYAKNQKR 61
Query: 53 ------LGATGGSVTGALNAYIMEGKT---VRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
L V ++ Y E T V K L + K G+Y HAL + EWM+
Sbjct: 62 MMFEELLNMDKSGVKETIDQYKSEELTYVSVTKSDLHQWAKRFDKQGKYEHALAIFEWMD 121
Query: 104 SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
+KM F+ FA Y+ L A+T G+ AA +YF
Sbjct: 122 GKKMSFTGNQFADYVALIAETKGMEAARRYF 152
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 128/305 (41%), Gaps = 9/305 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ +L K G+ A ++ M+ + + + + + + N + A + FN +
Sbjct: 374 IDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGL 433
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
YTY ++ Y K + +A+ FEKM + N VA N G+ E+ +
Sbjct: 434 ETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKE 493
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASI 259
N +K+ ++ D +TY + M+ Y +D ++ EM N C+ + ++L
Sbjct: 494 FFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEV--VIINSLIDT 551
Query: 260 YVKAELFEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT 317
KA+ ++A ++++EMK P L L +A G++ PP
Sbjct: 552 LYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPN 611
Query: 318 NTSYLVLLQALAKLNAIDI-LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
S+ LL L K +D+ LK F E C D+ + +I ++++ A +F
Sbjct: 612 TISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFP-DVLTYNTVIYGLIKENRVNYAFWLF 670
Query: 377 NNAKK 381
+ KK
Sbjct: 671 HQMKK 675
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 9/277 (3%)
Query: 154 YCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
Y + + E +AL EKM ++ F+ N ++ L + L+ G + + +M I
Sbjct: 168 YIRGGLREAPVAL-EKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPS 226
Query: 214 NLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELAL 273
TY M + DI+ V + EM + T++ I +A ++A L
Sbjct: 227 LKTYSALMVALGKRRDIETVMGLLQEM-ESLGLRPNIYTFTICIRILGRAGKIDEAYGIL 285
Query: 274 KKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKL 331
K++++ D Y LI CN L+ ++ +K S+ P +Y+ LL +
Sbjct: 286 KRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDH 345
Query: 332 NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK 391
+D +K+ + E E+ D+ ++I A + +EA + KK+ A
Sbjct: 346 GDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPN--LH 403
Query: 392 SRESFMIYYLRSRQLDLAL---NEMEAALSEAKQFHW 425
+ + + LR +LD AL N ME+ E + +
Sbjct: 404 TYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTY 440
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 10/277 (3%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + ++++ ME + + + V + + A++YFN
Sbjct: 80 EDLWVLMIDSYGKAGIVQESVKLFHKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNIMIWGFFLSGKVETAXRFFEDMKSRDITPDVITYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +T+ ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRVDDALRLVEEM-KGFGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S AE +A LK++ + + P D + LIS C NLDA V ++
Sbjct: 259 STXLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLISGQCKAGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKL----NAIDILKQCFEE 343
+ + P Y VL++ K AI +L + E+
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAVQYDKAISLLDKLIEK 355
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 121/290 (41%), Gaps = 8/290 (2%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G A ++ ME+ ++ + +D K N I+ A ++F + + N TY
Sbjct: 277 GEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTY 336
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+N +C +A+ ++M + + V + L + G+ + +V+++K+
Sbjct: 337 TVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKE 396
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
LD + Y V + + N +D + EM K TY+ L S + K F+
Sbjct: 397 AGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEM-ELAGVKPDSVTYNTLISYFSKIGNFK 455
Query: 268 KAELALKKLEEMKPRDRKAYHF--LISLYCNTSNLDAVNRVW---GILKSTFPPTNTSYL 322
A +KK+ E + + + LI YC +N+D +++ + S PP Y
Sbjct: 456 LAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYN 515
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+L+ +L K ++ ++ + R + + I +A K+ ++A
Sbjct: 516 ILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKA 565
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 150/410 (36%), Gaps = 82/410 (20%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L KF R ALEV E M+ K K F A
Sbjct: 194 INHLCKFRRIDDALEVFEKMKGEK----------------------EETKVF-----VAP 226
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y L++ CK E AL L KM + T FN L Y R G+ E L
Sbjct: 227 DTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLF 286
Query: 203 NQ-----------------------------------MKQRNISLDNLTYIVWMQSYSHL 227
N+ M+Q+ + +N+TY V++ ++ ++
Sbjct: 287 NEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNV 346
Query: 228 NDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDR 284
N+++ EM +D C Y L +A + A + KL+E DR
Sbjct: 347 NNMNKAMEFLDEM---SKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDR 403
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
Y+ LIS +C + LD ++ + P + +Y L+ +K+ + + ++
Sbjct: 404 VCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKK 463
Query: 344 W-ESRCSSYDMRLADVIIRAYLQKDMYEEAALIF---NNAKKRANASARFFKSRESFMIY 399
E S + +I AY + +EA IF NN + + + + +I
Sbjct: 464 MTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIY----NILID 519
Query: 400 YL-RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA 448
L + Q++ AL + L + K P T ++ F+ ++ +D A
Sbjct: 520 SLCKQTQVNFAL----SLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKA 565
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 9/235 (3%)
Query: 146 TYGALLNCYCKELMTERALALFEKM----DELKFL--GNTVAFNNLSTMYLRLGQPEKVR 199
T+G L+N CK + AL +FEKM +E K +T+ +N L ++G+ E+
Sbjct: 189 TFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEAL 248
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L+ +M+ + T+ + Y +I+ ++F EM N + + T + L
Sbjct: 249 CLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMEN-AQIEPNVITLNTLVDG 307
Query: 260 YVKAELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
K A + +++ + Y I+ +CN +N++ A+ + + K P
Sbjct: 308 MCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPD 367
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
Y L+ LA+ +D + + D +V+I + +K+ + A
Sbjct: 368 AVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRA 422
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 140/327 (42%), Gaps = 28/327 (8%)
Query: 61 TGALNAYIMEGKTVR----KDML------------EYCVRSLRKFGRYRHALEVIEWMES 104
TG ++ EGKT + KDM+ + SL K G R AL + + M+
Sbjct: 232 TGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDD 291
Query: 105 RKMHFSYTDFAVYLDLTAKTNGI-------AAAEKYFNGLSEYAKNRYTYGALLNCYCKE 157
+ + D Y L A +G+ + E+ G + + T+ ++++ CK
Sbjct: 292 KGVA---PDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKI 348
Query: 158 LMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
+A+ + E M E + N V +N L +LR+ + + L++++ + D+ TY
Sbjct: 349 GRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTY 408
Query: 218 IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE 277
+ + +S + ++D E+ M + K Y L + + + E+A +++
Sbjct: 409 SILINGFSKMWEVDRAEKFLCTM-RQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD 467
Query: 278 EMKPRDRKAYHFLISLYCNTSNLDAVNR-VWGILKSTFPPTNTSYLVLLQALAKLNAIDI 336
+ D AY +I C + ++ V + + +L P +Y +L+ AKL ++
Sbjct: 468 KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEE 527
Query: 337 LKQCFEEWESRCSSYDMRLADVIIRAY 363
++ ++ + D+ + D +I+ Y
Sbjct: 528 AERVLKQMTASGFVPDVAVFDSLIKGY 554
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A + TY L+N Y K E A + ++M F+ + F++L Y GQ +KV
Sbjct: 506 APDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLK 565
Query: 201 LVNQMKQRNISLD 213
L+++M+ +N++ D
Sbjct: 566 LIHEMRAKNVAFD 578
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 14/263 (5%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTA---KTNGIAAAEKYFNGLSE--YAKNR 144
G+ A+ V+E M MH D AV+ + + + +AAA +F+ + + A +
Sbjct: 334 GQVSDAVRVVEDM---VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADG 390
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY AL+N C+ + A + ++M++ + V + L Y ++G+ + + N+
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M Q+ ++ + +TY D+ + +EMC++ + TY++L + KA
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE-LNIFTYNSLINGLCKAG 509
Query: 265 LFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSY 321
E+A + ++E +KP D Y +I C + LD A + + +L PT +Y
Sbjct: 510 NLEQAMRTMIDMDEAGLKP-DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTY 568
Query: 322 LVLLQALAKLNAIDILKQCFEEW 344
VL+ ++ K+ EW
Sbjct: 569 NVLMNGFCMSGRVEGGKRLL-EW 590
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 127/320 (39%), Gaps = 23/320 (7%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYI--------------MEGKTVRKDMLEYCV--RSLR 87
D++ KR L A G + T +N ME K + D + Y V
Sbjct: 379 DEMQKR--GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRY 145
K G+ A V M +++ + + D K + AA + + + N +
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+N CK E+A+ MDE + + + + + ++ L+ +M
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY-VKAE 264
+ I +TY V M + ++G +R+ M E TTY++L Y ++
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML-EKNIHPNTTTYNSLMKQYCIEKN 615
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLV 323
+ E+ L + + Y+ LI +C N+ +A+ +++ F T +SY
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675
Query: 324 LLQALAKLNAIDILKQCFEE 343
L++ L K ++ FE+
Sbjct: 676 LIRLLNKKKKFTEARRLFEK 695
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 4/206 (1%)
Query: 127 IAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
I A + F+ ++ + TYG +++ YC E A+ L +M N VA+ ++
Sbjct: 269 IKDAHQLFDEMAS-PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
+ GQ +V M + LD + M + D+ F EM +
Sbjct: 328 ALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM-QKRGL 386
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNR 305
TY+ L + +A ++AE L+++E+ D Y LI YC +
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446
Query: 306 VWG-ILKSTFPPTNTSYLVLLQALAK 330
V +++ P +Y L L K
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCK 472
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 18/202 (8%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+++L GR + A ++ + M S D Y + ++ E LSE A
Sbjct: 260 LKALCTAGRIKDAHQLFDEMASPP------DVVTYGIMVHGYCTLSELETAIKLLSEMAA 313
Query: 143 -----NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N Y +++ C E A+ + E M + + F + + + R G
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK---CRWTTYS 254
R ++M++R ++ D +TY + ++ ERV EM EDK TY+
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM----EDKGLDVDAVTYT 429
Query: 255 NLASIYVKAELFEKAELALKKL 276
L Y K +A L K+
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKM 451
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 14/263 (5%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTA---KTNGIAAAEKYFNGLSE--YAKNR 144
G+ A+ V+E M MH D AV+ + + + +AAA +F+ + + A +
Sbjct: 334 GQVSDAVRVVEDM---VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADG 390
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY AL+N C+ + A + ++M++ + V + L Y ++G+ + + N+
Sbjct: 391 VTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNK 450
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M Q+ ++ + +TY D+ + +EMC++ + TY++L + KA
Sbjct: 451 MVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE-LNIFTYNSLINGLCKAG 509
Query: 265 LFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSY 321
E+A + ++E +KP D Y +I C + LD A + + +L PT +Y
Sbjct: 510 NLEQAMRTMIDMDEAGLKP-DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTY 568
Query: 322 LVLLQALAKLNAIDILKQCFEEW 344
VL+ ++ K+ EW
Sbjct: 569 NVLMNGFCMSGRVEGGKRLL-EW 590
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 127/320 (39%), Gaps = 23/320 (7%)
Query: 44 DKLYKRLSALGATGGSVTGALNAYI--------------MEGKTVRKDMLEYCV--RSLR 87
D++ KR L A G + T +N ME K + D + Y V
Sbjct: 379 DEMQKR--GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYC 436
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRY 145
K G+ A V M +++ + + D K + AA + + + N +
Sbjct: 437 KVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+N CK E+A+ MDE + + + + + ++ L+ +M
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY-VKAE 264
+ I +TY V M + ++G +R+ M E TTY++L Y ++
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML-EKNIHPNTTTYNSLMKQYCIEKN 615
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLV 323
+ E+ L + + Y+ LI +C N+ +A+ +++ F T +SY
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675
Query: 324 LLQALAKLNAIDILKQCFEE 343
L++ L K ++ FE+
Sbjct: 676 LIRLLNKKKKFTEARRLFEK 695
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 4/206 (1%)
Query: 127 IAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
I A + F+ ++ + TYG +++ YC E A+ L +M N VA+ ++
Sbjct: 269 IKDAHQLFDEMAS-PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
+ GQ +V M + LD + M + D+ F EM +
Sbjct: 328 ALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM-QKRGL 386
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNR 305
TY+ L + +A ++AE L+++E+ D Y LI YC +
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446
Query: 306 VWG-ILKSTFPPTNTSYLVLLQALAK 330
V +++ P +Y L L K
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCK 472
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 18/202 (8%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+++L GR + A ++ + M S D Y + ++ E LSE A
Sbjct: 260 LKALCTAGRIKDAHQLFDEMASPP------DVVTYGIMVHGYCTLSELETAIKLLSEMAA 313
Query: 143 -----NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N Y +++ C E A+ + E M + + F + + + R G
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK---CRWTTYS 254
R ++M++R ++ D +TY + ++ ERV EM EDK TY+
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM----EDKGLDVDAVTYT 429
Query: 255 NLASIYVKAELFEKAELALKKL 276
L Y K +A L K+
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKM 451
>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 636
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 7/244 (2%)
Query: 74 VRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
VR ++ Y V++ GR A V+ M + + AK + AE
Sbjct: 221 VRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAE 280
Query: 132 KYFNGLSEYAKNRY---TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
+ +++ A R T+G ++ YC+E AL +M + L N + FN L
Sbjct: 281 ELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKG 340
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC 248
+L V ++ M+Q I D +TY + + S + + +VF +M E +
Sbjct: 341 FLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMI-EAGIEP 399
Query: 249 RWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVW 307
YS LA YV+A+ EKAE L+++ + R + +IS +C+ +++ RV+
Sbjct: 400 DPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVY 459
Query: 308 GILK 311
++
Sbjct: 460 AAMR 463
>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
Length = 634
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 7/244 (2%)
Query: 74 VRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
VR ++ Y V++ GR A V+ M + + AK + AE
Sbjct: 221 VRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAE 280
Query: 132 KYFNGLSEYAKNRY---TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
+ +++ A R T+G ++ YC+E AL +M + L N + FN L
Sbjct: 281 ELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKG 340
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC 248
+L V ++ M+Q I D +TY + + S + + +VF +M E +
Sbjct: 341 FLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMI-EAGIEP 399
Query: 249 RWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVW 307
YS LA YV+A+ EKAE L+++ + R + +IS +C+ +++ RV+
Sbjct: 400 DPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVY 459
Query: 308 GILK 311
++
Sbjct: 460 AAMR 463
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 135/334 (40%), Gaps = 20/334 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK + D + Y V K G L ++ M + + + + ++ K
Sbjct: 303 MRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGN 362
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
++ A + F+ + N TY L++ +C++ + A + +M F + V +N
Sbjct: 363 LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNA 422
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L Y LG+ ++ ++ M +R + D ++Y + + ++ ++ EM +
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVN 304
T S + + ++ +L E +L + + P D Y LI+ YC L
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKAL 542
Query: 305 RVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDI-----LKQCFEE----------WESRC 348
R+ +++ F P N +Y VL+ L K + LK +EE C
Sbjct: 543 RLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENC 602
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
S+ + + + +++ + K + EA +F +R
Sbjct: 603 SNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQR 636
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N TY L++ CK+ + A+AL M N +++N++ G+ +V
Sbjct: 239 SPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGE 298
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
LV +M+ + + D +TY + + ++ + EM + TY+ L +
Sbjct: 299 LVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSP-NVVTYTTLINCM 357
Query: 261 VKA-------ELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKS 312
KA E+F++ ++ ++P +R Y LI +C ++ +V ++ S
Sbjct: 358 CKAGNLSRAVEIFDQM-----RVRGLRPNER-TYTTLIDGFCQKGLMNEAYKVLSEMIVS 411
Query: 313 TFPPTNTSYLVLLQALAKLN----AIDILKQCFE 342
F P+ +Y L+ L A+ IL+ E
Sbjct: 412 GFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE 445
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 111/291 (38%), Gaps = 20/291 (6%)
Query: 89 FGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYT 146
GR + A+ ++ M R + ++ + + + A + + E + T
Sbjct: 430 LGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVT 489
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +L+ C + A LF +M + V + +L Y G+ K L ++M
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV 549
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERV----FYE-----------MCNECEDKCRWT 251
QR DN+TY V + + +R+ FYE + C + +
Sbjct: 550 QRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNN-EFK 608
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLD-AVNRVWGI 309
+ L + L +A+ K + + + A Y+ +I + N+ A N +
Sbjct: 609 SVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMEL 668
Query: 310 LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
S+F + + L++ALA+ D L + + C D ++A V++
Sbjct: 669 EHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLV 719
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 174/422 (41%), Gaps = 64/422 (15%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L + GR A+ V M R + + + Y AK IA A + F+ + + +
Sbjct: 22 ISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAY----AKNGRIANARELFDLMPQ--R 75
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N ++ +++ Y + E A LF++M F + ++ + T Y R+G+ EK R L
Sbjct: 76 NLVSWNSMIAGYLHNELVEDAARLFDRM----FKRDIYSWTLMITCYTRIGELEKARELF 131
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
N + + D + + Y+ +++F EM ++ W + + S Y K
Sbjct: 132 NLLPDKQ---DTVCRNALIAGYAKKRLFREAKKLFDEML--VKNVVSWNS---ILSGYTK 183
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYL 322
K +L L+ E M R+ +++ ++ Y +LD+ W K P S++
Sbjct: 184 N---GKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDS---AWMFFKKIPTPNVVSWV 237
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
+L A + + F E ++ ++ + +I AY++++ ++A +F ++
Sbjct: 238 TMLSGFAHYGRMTEARNLFNEMPTK----NLVSWNAMIGAYVRENQIDDAYKLFMEMPEK 293
Query: 383 ANAS-----------ARFFKSRE--SFMIY------------YLRSRQLDLALNEMEAAL 417
+ S + ++RE + M Y YL+S ++D A NE+ + +
Sbjct: 294 DSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEA-NEIFSQI 352
Query: 418 SEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAG 477
S W M R +E ++ + + C D +++ +I Y AG
Sbjct: 353 SVRDSVCWNSMITGYAHCGR----------TDEALRLFQEMVCKDMVSWNTMIAAYAQAG 402
Query: 478 KL 479
++
Sbjct: 403 QM 404
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 42/281 (14%)
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
A FN + KN ++ A++ Y +E + A LF +M E ++V++ + Y
Sbjct: 252 ARNLFNEMP--TKNLVSWNAMIGAYVRENQIDDAYKLFMEMPE----KDSVSWTAMINGY 305
Query: 190 LRLGQPEKVRPLVNQMKQRNISL---------------------------DNLTYIVWMQ 222
+R+G+ + R ++N M +NI+ D++ + +
Sbjct: 306 VRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMIT 365
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR 282
Y+H D R+F EM C+D W T + + Y +A +K AL+ EM+ R
Sbjct: 366 GYAHCGRTDEALRLFQEMV--CKDMVSWNT---MIAAYAQAGQMDK---ALEMFNEMQER 417
Query: 283 DRKAYHFLISLYC-NTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ +++ LI+ Y N +A+N + + P T+ + L+A A L A+++ Q
Sbjct: 418 NVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLH 477
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
D+ + + I+ Y + EA +F K +
Sbjct: 478 HLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXK 518
>gi|62320586|dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
Length = 778
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK----- 142
K GR ++E M + S+ D Y + + ++ L+E A+
Sbjct: 426 KNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPA 485
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFL-GNTVAFNNLSTMYLRLGQPEKVRPL 201
NR TY LL YCK+L +RA L +M E + + V++N + + +
Sbjct: 486 NRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAF 545
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
N+M+ R I+ ++Y M++++ RVF EM N+ K ++ L Y
Sbjct: 546 FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYC 605
Query: 262 KAELFEKAELALKKLEE 278
+ L E A+ + +++E
Sbjct: 606 RLGLIEDAQRVVSRMKE 622
>gi|356575428|ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 562
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 131/300 (43%), Gaps = 19/300 (6%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-----SEYAK 142
K GRY +A + M+ S + + L + N AE+ F+ L S
Sbjct: 183 KGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKFREAEELFDNLLNDENSPLKP 242
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
++ + ++ + K E+A F +M EL TV +N+L + ++V +
Sbjct: 243 DQKMFNMMIYMHKKAGSYEKARKTFAQMAELGIQQTTVTYNSLMSFETNY---KEVSNIY 299
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+QM++ ++ D ++Y + + +Y + VF EM + R Y+ L +
Sbjct: 300 DQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRPTR-KAYNILLDAFSI 358
Query: 263 AELFEKAELALKKLEEMKPRDRK-----AYHFLISLYCNTSNLDAVNRVWG-ILKSTFPP 316
+ + E+A+ K + RDR +Y ++S Y N +++ + + +++ F P
Sbjct: 359 SGMVEQAQTVFKSMR----RDRYFPDLCSYTTMLSAYINADDMEGAEKFFKRLIQDGFEP 414
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y L++ AK+N ++++ + +EE R + + I+ AY + ++ A F
Sbjct: 415 NVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTILTTIMDAYGKSGDFDSAVHWF 474
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 10/192 (5%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y L++ Y K E ALA+FE+M + A+N L + G E+ + + M
Sbjct: 313 SYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVFKSM 372
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ D +Y + +Y + +D++G E+ F + + + TY L Y K
Sbjct: 373 RRDRYFPDLCSYTTMLSAYINADDMEGAEKFFKRLIQDGFEP-NVVTYGTLIKGYAK--- 428
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISL----YCNTSNLDAVNRVWGILKST-FPPTNTS 320
E+ +KK EEM R KA +++ Y + + D+ + ++S PP +
Sbjct: 429 INDLEMVMKKYEEMLMRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKA 488
Query: 321 YLVLLQALAKLN 332
VLL +LAK +
Sbjct: 489 KNVLL-SLAKTD 499
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
R Y LL+ + M E+A +F+ M ++ + ++ + + Y+ E
Sbjct: 346 RKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYINADDMEGAEKFFK 405
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
++ Q + +TY ++ Y+ +ND++ V + + EM K T + + Y K+
Sbjct: 406 RLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRG-IKANQTILTTIMDAYGKS 464
Query: 264 ELFEKAELALKKLEEMK-PRDRKAYHFLISL 293
F+ A K++E P D+KA + L+SL
Sbjct: 465 GDFDSAVHWFKEMESNGIPPDQKAKNVLLSL 495
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 117/298 (39%), Gaps = 5/298 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G+ + AL + + ++ S + + ++ K AA + + ++ N Y
Sbjct: 142 GKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIY 201
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+++ CK+ + + A L+ +M + V ++ L + + +GQ + L+N+M
Sbjct: 202 SMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVL 261
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
NI+ D TY + + + + E V M C + YS L Y
Sbjct: 262 ENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVN-LDVVVYSTLMDGYCLVNEVN 320
Query: 268 KAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLL 325
A+ + +M D Y +I+ C +D A+N I + P +Y L+
Sbjct: 321 NAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLI 380
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
L K I + F+E R D+ + +I A + + A +FN K +A
Sbjct: 381 DCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQA 438
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ +L K G A+ + M+ + + + F + LD K + A ++F L Y
Sbjct: 415 IDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGY 474
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY ++N CKE + + ALAL +M++ + + V F + + + +K
Sbjct: 475 CLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEK 534
Query: 201 LVNQMKQRNI 210
LV +M R +
Sbjct: 535 LVREMIARGL 544
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 4/161 (2%)
Query: 67 YIMEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
Y M V D+ Y + L K R AL + E + + M + +D K+
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386
Query: 125 NGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
I+ F+ + + + + TY L++ CK +RA+ALF KM + N F
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTF 446
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
L ++G+ + + + L+ TY V +
Sbjct: 447 TILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMING 487
>gi|15232734|ref|NP_187576.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09650, chloroplastic; AltName: Full=Protein HIGH
CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical protein [Arabidopsis thaliana]
gi|332641272|gb|AEE74793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 778
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK----- 142
K GR ++E M + S+ D Y + + ++ L+E A+
Sbjct: 426 KNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPA 485
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFL-GNTVAFNNLSTMYLRLGQPEKVRPL 201
NR TY LL YCK+L +RA L +M E + + V++N + + +
Sbjct: 486 NRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAF 545
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
N+M+ R I+ ++Y M++++ RVF EM N+ K ++ L Y
Sbjct: 546 FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYC 605
Query: 262 KAELFEKAELALKKLEE 278
+ L E A+ + +++E
Sbjct: 606 RLGLIEDAQRVVSRMKE 622
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 18/296 (6%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLN 152
A+EV + M+ + + + + +++ K ++ K FN + N TY AL+N
Sbjct: 254 AVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVN 313
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
+ +E + E+A +FE+M + + A+N L Y R G P+ + + M+
Sbjct: 314 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEP 373
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN--LASIYVKAELFEKAE 270
D +Y + + +Y E F E+ + R T S+ L S + K+ + E
Sbjct: 374 DRASYNILVDAYGRAGLHQEAEAAFQELKQQ---GMRPTMKSHMLLLSAHAKSGNVARCE 430
Query: 271 LALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK--------STFPPTNTS 320
+ +L + ++P D A + +++ Y LD + R+ G ++ P ++
Sbjct: 431 EVMAQLHKSGLRP-DTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTST 489
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
Y VL+ + +D ++ F +R + D+ I AY +K Y IF
Sbjct: 490 YNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIF 545
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 8/199 (4%)
Query: 135 NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
NGL A Y A L+ K +E+A+ ++++M + + NT + + +Y + Q
Sbjct: 229 NGLPPTAT---VYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQ 285
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
P + N+MK + TY + +++ + E VF EM + + Y+
Sbjct: 286 PMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM-QQAGHEPDVYAYN 344
Query: 255 NLASIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
L Y +A L + A +E M +P DR +Y+ L+ Y + LK
Sbjct: 345 ALMEAYSRAGLPQGASEIFSLMEHMGCEP-DRASYNILVDAYGRAGLHQEAEAAFQELKQ 403
Query: 313 T-FPPTNTSYLVLLQALAK 330
PT S+++LL A AK
Sbjct: 404 QGMRPTMKSHMLLLSAHAK 422
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 77/200 (38%), Gaps = 3/200 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL YC RA + +M + +N L+ EK + +M
Sbjct: 202 TYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRM 261
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ + TY + + Y +VF EM K TY+ L + + + L
Sbjct: 262 KKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEM-KTIGCKPNICTYTALVNAFAREGL 320
Query: 266 FEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLV 323
EKAE +++++ D AY+ L+ Y + ++ +++ P SY +
Sbjct: 321 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNI 380
Query: 324 LLQALAKLNAIDILKQCFEE 343
L+ A + + F+E
Sbjct: 381 LVDAYGRAGLHQEAEAAFQE 400
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 126/306 (41%), Gaps = 35/306 (11%)
Query: 41 GNEDKLYKRLSALGATGGSVTGALNAYI----MEGKTVRKDMLEYCVRSLRK-------- 88
G DK + ++ ATGG + L+A+ M G R D + + +++
Sbjct: 256 GRVDKALEAFDSIAATGGQPS--LHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTA 313
Query: 89 --------FGRYRHALEVIEWMESRKMHFSYTDFAVY---LDLTAKTNGIAAAEKYF--- 134
FG+ R+ +++ ++ + D Y +D AKT AEK++
Sbjct: 314 VYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLM 373
Query: 135 --NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
GL YT +L++ Y + E+ L L +M + + V FN L Y R+
Sbjct: 374 KREGLQ---PTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVFNLLIDTYGRM 430
Query: 193 GQPEKV-RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT 251
G+PE+ + L MK+ I+L+ + +++++ ++D E + M + K
Sbjct: 431 GKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWARNGNLDKAEEWLHRMNTDYATKPDIK 490
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGIL 310
T + L S + A ++ + +E+ K +D++A + + T D +
Sbjct: 491 TLTTLLSFCIPAADVKRGRRVIHMIEQHKLQKDKQARETIRQFHAATKRPDQEKKNQPTS 550
Query: 311 KSTFPP 316
ST P
Sbjct: 551 PSTTSP 556
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 127/307 (41%), Gaps = 9/307 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
VR L G+ AL+V + M + + ++ K + A F+ +
Sbjct: 133 VRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGI 192
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ + +TY +L++ C + L +M + K + N V+ N + + G+ +
Sbjct: 193 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHD 252
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
+V+ M Q + D +TY M + +++D +VF M N C C +Y+ L +
Sbjct: 253 VVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGC--VCNVVSYNTLING 310
Query: 260 YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPP 316
Y K + +KA +++ +E+ P + Y LI C+ L DA+ ++ P
Sbjct: 311 YCKIQRIDKAMYLFEEMCRQELIP-NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIP 369
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y +LL L K + + + E D+++ ++ I + E A +F
Sbjct: 370 NLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLF 429
Query: 377 NNAKKRA 383
+N R
Sbjct: 430 SNLAPRG 436
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
L K R A+ +++ +E + + + +D + + AA F+ L+ +
Sbjct: 381 LCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPD 440
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
+T+ ++ CK + + A LF +MDE L N +N ++ L+ + + L+
Sbjct: 441 VWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLE 500
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+M R S D T + ++ S DG+++
Sbjct: 501 EMLARGFSADVSTTALLVKMLSD----DGLDQ 528
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 125/306 (40%), Gaps = 43/306 (14%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMD 171
+ V ++ K + + AE+ F + A + ++YG L+N + K ++A ++F++M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
E N + +N L + R G+ EK + L+++M + + + +TY + Y D+
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 232 GVERVFYEM------------CNECEDKCRWTTYSNLASIYVKAEL-------------- 265
R+F EM + CR +I+ +
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Query: 266 ----FEKAELALKKLEEM---------KPRDRKAYHFLISLYCNTSNLDAVNRVWGILK- 311
F K EL + L + KP D Y+ +I C NL+A ++ ++
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
+ PT +Y LL K+ + F+E + D + VII A+L++ M +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 372 AALIFN 377
A ++ +
Sbjct: 894 ALVLVD 899
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 11/230 (4%)
Query: 128 AAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
A+A+KY + E N+ L+N YCK+ A + + M + LG+ + L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECE 245
+ + + + +M+ + I+ D +Y V + +S L ++ +F EM E
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 246 DKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLD 301
Y+ L + ++ EKA+ + L+EM + + Y +I YC + +L
Sbjct: 659 TP-NVIIYNMLLGGFCRSGEIEKAK---ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 302 AVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
R++ +K P + Y L+ +LN ++ F + C+S
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS 764
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 10/244 (4%)
Query: 42 NEDKLYKRLSALGATGGSVTGALN---AYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
+D L+K +V GAL + I +G K + + L K R A +
Sbjct: 240 GKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSL 299
Query: 99 IEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTYGALLNCYCK 156
+ M+S + +++ +D K AA+ + + + N Y Y + K
Sbjct: 300 LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSK 359
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E + E+A ALF+ M + A+ +L Y R + L+ +MK+RNI + T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR--WTTYSNLASIYVKAELFEKAELALK 274
Y ++ D+DG + EM CR Y+ L +++ F A LK
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEM---IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 275 KLEE 278
+++E
Sbjct: 477 EMKE 480
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 3/235 (1%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTYG ++ C + A + ++M N V + L +L+ + ++ +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK++ I+ D Y + S +D EM E K TY S Y++A
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV-ENGLKPNAFTYGAFISGYIEAS 536
Query: 265 LFEKAELALKKLEEMKPRDRKAY-HFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYL 322
F A+ +K++ E K LI+ YC ++A + ++ +Y
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
VL+ L K + +D ++ F E + + D+ V+I + + ++A+ IF+
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ CKE E A LF +M + + + +L Y ++G+ ++ P+
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 203 NQMKQRNISLDNLTYIVWMQSY----SHLNDIDGVERVFYEMCNECEDKCRW--TTYSNL 256
++ I D++ Y V + ++ + V+++F + N +D C+ +T L
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK--NAVDDGCKLSISTCRAL 921
Query: 257 ASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSN 299
S + K E AE ++ + ++ D LI+ C +SN
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 21/243 (8%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A + TY L++ CK A + E M E N V +N L + +LG ++
Sbjct: 233 APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVV 292
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-ECEDKCRWTTYSNLASI 259
L NQM + + S D TY + + Y ++ EM CE + TY+ L
Sbjct: 293 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN--FITYNTLMDS 350
Query: 260 YVKA----ELFEKAELALKKLEEMKPRDRKAYHF----LISLYCNTSNLDAVNRVWGIL- 310
VK+ + F A++ L+ RD K HF +I ++C LD ++ ++
Sbjct: 351 LVKSGKYIDAFNLAQMMLR-------RDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 403
Query: 311 -KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMY 369
+ P T Y +++ + N ID +Q E D+ + I+ +
Sbjct: 404 DRGCLPDIYT-YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 462
Query: 370 EEA 372
+EA
Sbjct: 463 DEA 465
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 133/336 (39%), Gaps = 11/336 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G+ A E+ + M R + + + + N I A + ++E +
Sbjct: 388 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 447
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY ++++ CK + A ++E + + + V + L + + + L+ +M
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM 507
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT--TYSNLASIYVKA 263
++ + D + Y + + + + +D F EM ++ C T TYS + K+
Sbjct: 508 ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK---GCVPTVITYSIVIDKLCKS 564
Query: 264 ELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSY 321
+ LK LE D Y +I C + + D ++ ++K T PT +Y
Sbjct: 565 ARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTY 624
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
VL+ L K++ +D E ES D + + + + +++A +F K
Sbjct: 625 NVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKS 684
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAAL 417
R + F S + + ++D A+ E AL
Sbjct: 685 RGCSPTPFMYSL--LLTKLVAEEKMDQAMEIWEEAL 718
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 129/339 (38%), Gaps = 51/339 (15%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-- 140
++ L GR AL M+ R S + + +D K+ I+ A + E
Sbjct: 209 IKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGC 267
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N TY L+N +CK + A+ LF +M E + +N L Y + +P+
Sbjct: 268 APNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAK 327
Query: 201 LVNQMKQRNISLDNLTYIVWMQSY-----------------------SHLN---DID--- 231
L+ +M + + +TY M S SH ID
Sbjct: 328 LLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFC 387
Query: 232 --GVERVFYEMCNECEDKCRWT---TYSNLASIYVKAELFEKAELALKKLEEMK-PRDRK 285
G + YE+ D+ TY+ + S +A + A L+++ E P D
Sbjct: 388 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 447
Query: 286 AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLV-------LLQALAKLNAIDILK 338
Y+ ++S C S +D V+ +L+ N Y + L+ L K +D +
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVLR------NGGYFLDVVTCSTLIDGLCKSRRLDDAE 501
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ E E S+ D+ ++I + + D +++ F+
Sbjct: 502 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 540
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 10/216 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L K + A+ V+ M + + + + + A I A +YF + E
Sbjct: 591 IHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGL 650
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y Y LL CK + ALA+ +M K NT +N L + R G +
Sbjct: 651 KLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAAD 710
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+ QMK+ + + TY ++ + D+ ++V EM + K TY+ L +
Sbjct: 711 LMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMAD-VGLKPNLKTYTTLIKGW 769
Query: 261 VKAELFEKAELALKKLEEMK----PRDRKAYHFLIS 292
KA L ++ ALK EEMK D AYH L++
Sbjct: 770 AKASLPDR---ALKSFEEMKLAGLKPDEAAYHCLVT 802
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y ++++ Y ++ L +FE++ E F + +++ L +Y+++G+ K + +M+
Sbjct: 412 YHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEME 471
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
I +N TY + + + HL+D +F EM R Y+ L + K
Sbjct: 472 SYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDR-AIYNLLIEAFCKMGNM 530
Query: 267 EKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLV 323
++A L+K+ E M+P +R A+ +I + ++ A+N + + +S PT +Y
Sbjct: 531 DRAIRILEKMQKERMQPSNR-AFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNA 589
Query: 324 LLQALAKLNAID 335
L+ L K N ++
Sbjct: 590 LIHGLIKKNQVE 601
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 7/238 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R +G ++ Y K A A FE M N F +L Y V V
Sbjct: 268 SRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCV 327
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK I L +TY + + ++ +ND + +F E + D YSN+ + +
Sbjct: 328 EEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGD-LNGIIYSNIIHAHCQ 386
Query: 263 AELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+ ++AE ++++EE P D AYH ++ Y + V+ LK F P+
Sbjct: 387 SGNMDRAEELVREMEEDGIDAPID--AYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSI 444
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY L+ K+ + +E ES ++ + ++I ++ + A IF
Sbjct: 445 ISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIF 502
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 175/429 (40%), Gaps = 42/429 (9%)
Query: 88 KFGR-YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNR 144
K GR + L +++ M S+ + F + + + + A+++F GL YA
Sbjct: 256 KMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGT 315
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY ALL + K + AL++ ++M++ + V +N L Y+R G E+ L++
Sbjct: 316 VTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDT 375
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M + I + +TY + +Y +D ++ +M E TY+ + + K
Sbjct: 376 MTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQM-KESGCAPNVCTYNAILGMLGKK- 433
Query: 265 LFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNT 319
++E +K L +MK +R ++ ++S+ N V RV+ +KS F P
Sbjct: 434 --SQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRD 491
Query: 320 SYLVLLQALAKLNAIDILKQCFEE-----WESRCSSY-----------DMRLADVIIRAY 363
++ L+ A + + ++ ++E + ++Y D R A+ +I+
Sbjct: 492 TFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDM 551
Query: 364 LQKDMYEEA---ALIFNNAKKRANASA--RFFKSRESFMIY--YLRSRQLDL------AL 410
K +LI N+ K R K I+ ++ R L L AL
Sbjct: 552 KNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRAL 611
Query: 411 NEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLL 469
ME A ++ ++P V ++ F + D A E +++ D Y+ L
Sbjct: 612 AGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSL 671
Query: 470 IKTYIAAGK 478
+ Y G+
Sbjct: 672 MDLYARGGE 680
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 117/265 (44%), Gaps = 6/265 (2%)
Query: 130 AEKYFN--GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A K F+ L +Y+ + Y +L+ Y + ERA+A+FEKM+E V +N +
Sbjct: 193 ASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLD 252
Query: 188 MYLRLGQP-EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
+Y ++G+ K+ L+++M+ + + D T + + +D + F + ++
Sbjct: 253 VYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYA 312
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNL-DAVN 304
TY+ L ++ KA ++ +A +K++E+ P D Y+ L++ Y +
Sbjct: 313 PGT-VTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAA 371
Query: 305 RVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL 364
+ + ++ P +Y ++ A + +D +++ + + ++ + I+
Sbjct: 372 LIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLG 431
Query: 365 QKDMYEEAALIFNNAKKRANASARF 389
+K EE I + K A R
Sbjct: 432 KKSQSEEMMKILCDMKVDGCAPNRI 456
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 73/176 (41%), Gaps = 4/176 (2%)
Query: 123 KTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
K +A E+ F L + Y + + ++L+ + ++ M +RA + + E + V
Sbjct: 607 KCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLV 666
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+N+L +Y R G+ K ++ +++ D ++Y ++ + + R EM
Sbjct: 667 TYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM 726
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK-AYHFLISLYC 295
+ C TY+ Y +F + + L + + R + Y ++ YC
Sbjct: 727 ISRGIRPC-IVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYC 781
>gi|255568420|ref|XP_002525184.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535481|gb|EEF37150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 740
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK-----NR 144
GR + ++E M + + S+ D Y + + + ++ L+E + NR
Sbjct: 391 GRVSDTIRMLEAMRHQDDNASHPDHVSYTTVISALVKAGSMDRARQVLAEMTRIGVPANR 450
Query: 145 YTYGALLNCYCKELMTERALALFEKMDE-LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY LL +C+ L ++A L ++MDE + + V++N + +++ N
Sbjct: 451 ITYNILLKGHCQHLQIDKAKELLKEMDENAEIEPDVVSYNTMIDGCIQVDDSAGALAFFN 510
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+M+++ I+ ++Y M+++S +VF EM + K ++ L Y K
Sbjct: 511 EMREKGIAPTKISYTTLMKAFSLSGQPKLANQVFDEMFKDPRVKVDLIAWNVLVEAYCKL 570
Query: 264 ELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG 308
L E+A+ +++++E +H ++ Y + ++ A+ R G
Sbjct: 571 GLVEQAKKIIQRMKE------NGFHPNVATYGSLASGIALARKPG 609
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL+ + K + A++LF++M E + + +Y +LG+ EK LV +M
Sbjct: 232 TYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEM 291
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKA- 263
K++ +L TY ++ ++ +F M E C K +NL ++ KA
Sbjct: 292 KEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGC--KPDVVLINNLINLLGKAG 349
Query: 264 ------ELFEKAE------------LALKKLEEMKPRDRKA------------------Y 287
+LFE+ E +K L E K R +A Y
Sbjct: 350 RLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTY 409
Query: 288 HFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
LI +C T+ ++ A+ + + + F P +Y L+ AL K + + F+E
Sbjct: 410 SILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRE 469
Query: 347 RCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
C R+ V+I+ + EA +FN KK
Sbjct: 470 NCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKK 504
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 198/509 (38%), Gaps = 61/509 (11%)
Query: 8 RLISTGSYLVRQLCSTPTETVS-----------QRIAAPTPFPTGNE-----DKLYKRLS 51
R+IST +L +++ T +E V QR+ FP N D+ + R+
Sbjct: 10 RMISTLPHLSQRIKQTESEIVQMFKLSSPKDEIQRLPMNQKFPRNNPSVRTLDERFIRIL 69
Query: 52 ALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHA-LEVIEWMESRKMHFS 110
+ G AL + ++ + VR + K H ++ +W R+ +F
Sbjct: 70 KIFKWGPDAEKAL-------EVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRR-NFE 121
Query: 111 YTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGA-----LLNCYCKELMTERALA 165
+ D Y+ L + + + + E ++ G ++ K M +AL+
Sbjct: 122 H-DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALS 180
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL-DNLTYIVWMQSY 224
+F ++ K + +N++ M ++ G EKV L N+M L D +TY + ++
Sbjct: 181 IFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAF 240
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR 284
L D +F EM E Y+ + IY K EK AL ++EMK +
Sbjct: 241 GKLGRDDSAISLFDEM-KENGLHPTAKIYTTILGIYFKLGRVEK---ALGLVQEMKEKG- 295
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGI----------LKSTFPPTNTSYLVLLQALAKLNAI 334
+++Y T + V + + LK P L+ L K +
Sbjct: 296 ----CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRL 351
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQ-KDMYEEAALIFNNAKKRANASARFFKSR 393
+ FEE ES + ++ + +I+A + K EA L + K+ + F S
Sbjct: 352 ADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS- 410
Query: 394 ESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCK 453
+ + ++ +++ AL L E + + P + + K + A E +
Sbjct: 411 -ILIDGFCKTNRVEKAL----LLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQ 465
Query: 454 VLKSLNCLDFSA--YSLLIKTYIAAGKLA 480
L+ NC SA Y+++IK G+L+
Sbjct: 466 ELRE-NCGYSSARVYAVMIKHLGKCGRLS 493
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 120/291 (41%), Gaps = 14/291 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA-AEKYFNGLSE--YAK 142
L K GR A+++ E MES + + + + ++ A+ A ++ + E
Sbjct: 345 LGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVP 404
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ +TY L++ +CK E+AL L E+MDE F A+ +L + + E L
Sbjct: 405 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELF 464
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM----CNECEDKCRWTTYSNLAS 258
++++ Y V ++ + +F EM CN Y+ L S
Sbjct: 465 QELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNP-----DVYAYNALMS 519
Query: 259 IYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPP 316
V+ + ++A L+ +EE D +++ +++ + T ++ +K S P
Sbjct: 520 GMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKP 579
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
SY +L L++ + + +E S+ YD+ I+ A + D
Sbjct: 580 DVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKID 630
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 113/297 (38%), Gaps = 38/297 (12%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ K GR A E++ M ++ + + + + K I A + F +S
Sbjct: 419 INGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGC 478
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ YT+ +L+N CK E AL+L+ M + NTV +N L +L ++
Sbjct: 479 KPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFK 538
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
LV++M R LDN+TY +++ ++ +F EM + + + S
Sbjct: 539 LVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGK-------GIFPTIISC- 590
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNT 319
+ LIS C T + DA+ + ++ P
Sbjct: 591 ---------------------------NILISGLCRTGKVNDALKFLQDMIHRGLTPDIV 623
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y L+ L K+ + F + +S D + +I + + M+ +A L+
Sbjct: 624 TYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLL 680
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 112/296 (37%), Gaps = 10/296 (3%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGAL 150
R A V M SR + + F V + + + +A ++++ N Y L
Sbjct: 187 RVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTL 246
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
++ C+ AL L E M + + FN++ R G+ + L+++M R
Sbjct: 247 IHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGF 306
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE 270
S D LTY M + +D + ++ N Y+ L S YV + FE+A+
Sbjct: 307 STDALTYGYLMHGLCRMGQVDEARALLNKIPNP-----NTVLYNTLISGYVASGRFEEAK 361
Query: 271 LALKKLEEMKPRDRKAYHFLI---SLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQA 327
L + + AY F I L + A+ + ++ F P +Y +L+
Sbjct: 362 DLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILING 421
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
K ++ + ++ S + + +I A + EEA +F +
Sbjct: 422 FCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 10/277 (3%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDLWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E A FE M + + + +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLCGKVETANRFFEDMKXREISPDVITYNTMINGYYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D + EM K TY
Sbjct: 200 KIEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALTLLEEMKG-FGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + + P+D + LIS C NLDA V ++
Sbjct: 259 STLLPGLCNAEKMSEASGILKEMVDKYIAPKDNSIFLRLISGQCKAGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEE 343
+ + P Y VL++ K AI +L + E+
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAGDYEKAIKLLDKLIEK 355
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 165/436 (37%), Gaps = 46/436 (10%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K R+ A + + M R + + +A+ + K I A F+ + +
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
Y Y +L+N YCK+ +RA L M + +++ L R G
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAME 464
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC------NECEDKCRWTTYS 254
L +M +R I+ +N T+ + + +D R+F +M NE Y
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC 524
Query: 255 NLASIYVKAELFEK-AELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
+ +I +L+++ E+ LK D Y LIS C TS + N L+++
Sbjct: 525 LVGNIRKAFQLYDQMVEMGLKP-------DNYTYRSLISGLCLTSGVSKANEFVADLENS 577
Query: 314 FPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ N S LL L + ++E R D+ +I+ A L++ E++
Sbjct: 578 YAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKS 637
Query: 373 ALIFNNAKKRANASARFFK-------SRESFMI-------------YYLRSRQLDLALNE 412
++F K++ F S+E MI Y + + +N
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINN 697
Query: 413 M---------EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDF 463
+ E E + P + T + F +F E D++ A++ + +
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASI 757
Query: 464 SAYSLLIKTYIAAGKL 479
++++LIK AGK+
Sbjct: 758 VSFNILIKGLCKAGKI 773
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 128/305 (41%), Gaps = 9/305 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
V +L K G + A + ++ M + + + + + + + + A + F +
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
YTY ++ Y K + AL FEKM N VA N + G+ + +
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
+ +K + D++TY + M+ YS + +ID ++ EM N CE ++L +
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV--IVVNSLINT 547
Query: 260 YVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT 317
KA+ ++A +++EM KP L L N +A+ G+++ PP
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 318 NTSYLVLLQALAKLNAIDI-LKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++ L L K + + + LK F+ + C D+ + II ++ +EA F
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVP-DVFTYNTIIFGLVKNGQVKEAMCFF 666
Query: 377 NNAKK 381
+ KK
Sbjct: 667 HQMKK 671
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 110/266 (41%), Gaps = 7/266 (2%)
Query: 121 TAKTNGIAAA----EKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
+ K N ++ A EK+ L K TY L+ + M E A +F ++ +
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPK-LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
+ +N L Y + G+ +++ L +M + +T+ + + ++D +
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYC 295
+Y++ ++ + TY L K L+E +L L+ + Y+ LI+ +
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 296 NTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
DA ++ ++K P +Y VL+ L + +D F+E + + D+
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 355 LADVIIRAYLQKDMYEEAALIFNNAK 380
++II + EEA ++FN K
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMK 1023
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 15/259 (5%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
Y + +LR G+ V + M+ R + + T ++ L+ K G+ A + E
Sbjct: 123 YMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVK-GGLKQAPYALRKMRE 181
Query: 140 YA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ--- 194
+ N Y+Y L++ K A+ ++ +M G + S++ + LG+
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM---ILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTY 253
+ V L+ +M+ + + T+ + ++ I+ + M +E C TY
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV--VTY 296
Query: 254 SNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGIL-K 311
+ L A + A+ +K++ + + DR Y L+ + + +LD+V + W + K
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 312 STFPPTNTSYLVLLQALAK 330
P ++ +L+ AL K
Sbjct: 357 DGHVPDVVTFTILVDALCK 375
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 49/296 (16%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN-GLSE-YAKNRYTYGALLN 152
A+ +E ME + + F+ + + + AAEK+F +SE + N Y ++++
Sbjct: 177 AVSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIH 236
Query: 153 CYCKELMTERALALFEKMDELKF---LG-------------------------------- 177
YCK ERA AL M+E LG
Sbjct: 237 AYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTG 296
Query: 178 ---NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
V + L +Y +LG+ K +MK + I+L+ TY + + Y L D
Sbjct: 297 LSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAF 356
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD----RKAYHFL 290
VF +M +E + W TY+ L + K+ + A++ L MK R + Y +
Sbjct: 357 SVFEDM-SEAGIEPDWVTYNILLKAFCKSRQMTR---AIQLLGRMKTRGCSPTIQTYITI 412
Query: 291 ISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
I + T ++ + +K + P T+Y V++ L +L ID +E E
Sbjct: 413 IDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEME 468
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/335 (18%), Positives = 131/335 (39%), Gaps = 46/335 (13%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G+ ALE + M+++ + + +++ +D + A A F +SE +
Sbjct: 313 KLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWV 372
Query: 146 TYGALLNCYCKELMTERALALFEKM--------------------------------DEL 173
TY LL +CK RA+ L +M E+
Sbjct: 373 TYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEM 432
Query: 174 KFLG---NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
K G N +N + ++LGQ ++ ++++M+ + + +Y MQ ++ + +I
Sbjct: 433 KLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEI 492
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKA 286
G+ + NE K +Y++L KA + A+ EEM P +
Sbjct: 493 -GLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQN---AIAVTEEMAFAGVPMNNYI 548
Query: 287 YHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
++ L+ + ++ +A + + + F P SY + A K + + EE +
Sbjct: 549 FNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMK 608
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
+ +++ ++I + E+A + ++ K
Sbjct: 609 QQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMK 643
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 133/343 (38%), Gaps = 21/343 (6%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y L++ Y K A FEKM + A+NNL Y+ + V +M+
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW----TTYSNLASIYVK 262
I + T+ + Y +++ E+ F +E W YS++ Y K
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSE-----NWNHNVAIYSSIIHAYCK 240
Query: 263 AELFEKAELALKKLEEMKPRDRKA-YHFLISLY--CNTSN--LDAVNRVWGILKSTFPPT 317
A E+AE + +EE Y+ L+ Y C+ L+ +++ + + PT
Sbjct: 241 AGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPT 300
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y L+ KL + + +E +++ + + +++ Y+Q + A +F
Sbjct: 301 AVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFE 360
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
+ + + + + + +SRQ+ A+ L K P T T
Sbjct: 361 DMSEAGIEPD--WVTYNILLKAFCKSRQMTRAIQ----LLGRMKTRGCSPTIQTYITIID 414
Query: 438 FFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
F + DV A + +K C + + Y++++ + G++
Sbjct: 415 GFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQI 457
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 127/305 (41%), Gaps = 11/305 (3%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK ++ + Y + L K G Y A V++ M + + F L + +
Sbjct: 285 MAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKED 344
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ AE+ FN + + + ++ +++ + + RALA FEKM + + +TV +
Sbjct: 345 VWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 404
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L Y R + N+M +R +D +TY + +D + +F EM E
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMV-ER 463
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELAL---KKLEEMKPRDRKAYHFLISLYCNTSNLD 301
+ T + L Y K KA L+L L +KP D Y+ L+ +C ++
Sbjct: 464 GVFPDFYTLTTLIHGYCKDGNMTKA-LSLFETMTLRSLKP-DVVTYNTLMDGFCKVGEME 521
Query: 302 AVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
+W ++ P+ S+ +L+ L + + ++E + + + + II
Sbjct: 522 KAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTII 581
Query: 361 RAYLQ 365
+ YL+
Sbjct: 582 KGYLR 586
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 3/241 (1%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YT L++ YCK+ +AL+LFE M + V +N L + ++G+ EK + L
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYD 529
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M R I +++ + + + L + R++ EM E K T + + Y++A
Sbjct: 530 MISREIFPSYISFSILINGFCSLGLVSEAFRLWDEM-KEKGIKPTLVTCNTIIKGYLRAG 588
Query: 265 LFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYL 322
KA L + E P D Y+ LI+ + N D A + + + P +Y
Sbjct: 589 NLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYN 648
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
+L ++ + + + + + D +I Y+ KD +EA + + +R
Sbjct: 649 AILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQR 708
Query: 383 A 383
Sbjct: 709 G 709
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 125/318 (39%), Gaps = 13/318 (4%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + V D++ + V + G AL E M+ + + + ++ + +
Sbjct: 355 MLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
++ A K N + E + TY LLN C+ M + A LF++M E +
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 474
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L Y + G K L M R++ D +TY M + + +++ + ++Y+M +
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR- 533
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAY----HFLISLYCNTSNL 300
E + ++S L + + L + A + +EMK + K + +I Y NL
Sbjct: 534 EIFPSYISFSILINGFCSLGLVSE---AFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNL 590
Query: 301 DAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
N + S PP +Y L+ + K D E R ++ + I
Sbjct: 591 SKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAI 650
Query: 360 IRAYLQKDMYEEAALIFN 377
+ + + +EA ++ +
Sbjct: 651 LGGFSRHGRMQEAEMVLH 668
>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 458
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S + N TY AL++ +C E AL LF+KM N FN L + + G+ E+
Sbjct: 201 SGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEE 260
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+ ++N M ++++ D + Y M Y +N++ + +F M E E +Y+ +
Sbjct: 261 AKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMA-ERELSYDVRSYNIMI 319
Query: 258 SIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLD-AVNRVWGILKS 312
+ + K ++ ++ A+K EEM + D YH LI C + L A+ V +
Sbjct: 320 NEFCKMKMVDE---AIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDR 376
Query: 313 TFPPTNTSYLVLLQALAK 330
PP +Y ++ L K
Sbjct: 377 GEPPNIITYCPIVDVLCK 394
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL+ + K + A++LF++M E + + +Y +LG+ EK LV +M
Sbjct: 232 TYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEM 291
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKA- 263
K++ +L TY ++ ++ +F M E C K +NL ++ KA
Sbjct: 292 KEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGC--KPDVVLINNLINLLGKAG 349
Query: 264 ------ELFEKAE------------LALKKLEEMKPRDRKA------------------Y 287
+LFE+ E +K L E K R +A Y
Sbjct: 350 RLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTY 409
Query: 288 HFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
LI +C T+ ++ A+ + + + F P +Y L+ AL K + + F+E
Sbjct: 410 SILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRE 469
Query: 347 RCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
C R+ V+I+ + EA +FN KK
Sbjct: 470 NCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKK 504
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 198/509 (38%), Gaps = 61/509 (11%)
Query: 8 RLISTGSYLVRQLCSTPTETVS-----------QRIAAPTPFPTGNE-----DKLYKRLS 51
R+IST +L +++ T +E V QR+ FP N D+ + R+
Sbjct: 10 RMISTLPHLSQRIKQTESEIVQMFKLSSPKDEIQRLPMNQKFPRNNPSVRTLDERFIRIL 69
Query: 52 ALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHA-LEVIEWMESRKMHFS 110
+ G AL + ++ + VR + K H ++ +W R+ +F
Sbjct: 70 KIFKWGPDAEKAL-------EVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRR-NFE 121
Query: 111 YTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGA-----LLNCYCKELMTERALA 165
+ D Y+ L + + + + E ++ G ++ K M +AL+
Sbjct: 122 H-DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALS 180
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL-DNLTYIVWMQSY 224
+F ++ K + +N++ M ++ G EKV L N+M L D +TY + ++
Sbjct: 181 IFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAF 240
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR 284
L D +F EM E Y+ + IY K EK AL ++EMK +
Sbjct: 241 GKLGRDDSAISLFDEM-KENGLHPTAKIYTTILGIYFKLGRVEK---ALGLVQEMKEKG- 295
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGI----------LKSTFPPTNTSYLVLLQALAKLNAI 334
+++Y T + V + + LK P L+ L K +
Sbjct: 296 ----CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRL 351
Query: 335 DILKQCFEEWESRCSSYDMRLADVIIRAYLQ-KDMYEEAALIFNNAKKRANASARFFKSR 393
+ FEE ES + ++ + +I+A + K EA L + K+ + F S
Sbjct: 352 ADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS- 410
Query: 394 ESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCK 453
+ + ++ +++ AL L E + + P + + K + A E +
Sbjct: 411 -ILIDGFCKTNRVEKAL----LLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQ 465
Query: 454 VLKSLNCLDFSA--YSLLIKTYIAAGKLA 480
L+ NC SA Y+++IK G+L+
Sbjct: 466 ELRE-NCGYSSARVYAVMIKHLGKCGRLS 493
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 120/291 (41%), Gaps = 14/291 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA-AEKYFNGLSE--YAK 142
L K GR A+++ E MES + + + + ++ A+ A ++ + E
Sbjct: 345 LGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVP 404
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ +TY L++ +CK E+AL L E+MDE F A+ +L + + E L
Sbjct: 405 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELF 464
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM----CNECEDKCRWTTYSNLAS 258
++++ Y V ++ + +F EM CN Y+ L S
Sbjct: 465 QELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNP-----DVYAYNALMS 519
Query: 259 IYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPP 316
V+ + ++A L+ +EE D +++ +++ + T ++ +K S P
Sbjct: 520 GMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKP 579
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
SY +L L++ + + +E S+ YD+ I+ A + D
Sbjct: 580 DVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKID 630
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 9/243 (3%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL+ + E A +F M+E + +++ +N L +Y + + E V L+ +M
Sbjct: 182 TYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREM 241
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+Q + D + Y + +++Y ++F +M E T+S L Y K
Sbjct: 242 EQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQM-QEAGCTPDVVTFSTLLEAYGKHGC 300
Query: 266 FEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLV 323
+++ L ++E D Y+ LI ++ +++N W +L P ++Y
Sbjct: 301 YDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAG 360
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD---VIIRAYLQKDMYEEAALIFNNAK 380
LL + K K+ SY D +I AY +Y EA FN+ K
Sbjct: 361 LLYSCGKGGLHKAAKKIHRH---MLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMK 417
Query: 381 KRA 383
+
Sbjct: 418 ESG 420
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 124/288 (43%), Gaps = 7/288 (2%)
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA---KNRYTYGALLNCYCKEL 158
ME + + DF++ A+ + A + F + + N + Y ++ +E
Sbjct: 29 MEGYRNKLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREG 88
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
M ++A LFE M N +F L Y R GQ E L+ +MK+ ++ + +TY
Sbjct: 89 MLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYN 148
Query: 219 VWMQSYSHLN-DIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE 277
+ + + + +G+ +F +M +E + TY+ L S L E+A + + +
Sbjct: 149 TVINACAKGGLEWEGLLGLFAQMRHEG-IQPDIITYNTLLSACSSRGLVEEAGMVFRTMN 207
Query: 278 EMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAID 335
E D Y+ L+ +Y + V + + ++ P +Y +L++A +
Sbjct: 208 EAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYR 267
Query: 336 ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ F++ + + D+ ++ AY + Y+E L+F + K+R
Sbjct: 268 AAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERG 315
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 148/358 (41%), Gaps = 43/358 (12%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
T NED+LY +S R+ + + V L + ++ AL ++
Sbjct: 91 TQNEDELYAVMSPYNG-------------------RQLSMRFMVSLLSREPDWQRALALL 131
Query: 100 EWMESRKMH----FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNC 153
+W+ + ++ F+Y V L + A F+ + + + +RYTY L+ C
Sbjct: 132 DWINDKALYRPSLFAYN---VLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITC 188
Query: 154 YCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
+ K + + +L ++M++ G+ V ++NL + +L K + +++K I+ D
Sbjct: 189 FGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPD 248
Query: 214 NLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYSNLASIYVKAELFE 267
+ +Y+ + ++ G ++F E + E D +YS L +IYV + F
Sbjct: 249 -------LIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFV 301
Query: 268 KAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKSTFPPTNTSYLVLL 325
+A ++ E K P D + +I +Y +R+ W + K P SY LL
Sbjct: 302 EALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLL 361
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ + + F +S+ ++ + +I Y + +E+A + KR
Sbjct: 362 RVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRG 419
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+N TY ++N Y K L E+A L ++M++ N + ++ + +++ + G+ ++ L
Sbjct: 387 QNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAIL 446
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+++ + +D + Y + +Y + +R+ +E+ ++ R T + LA
Sbjct: 447 FQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHEL-KRPDNIPRDTAIAILA---- 501
Query: 262 KAELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST--FPPTN 318
+A E+A ++ + + +D + +I+L+ V V+ ++ FP ++
Sbjct: 502 RAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSD 561
Query: 319 TSYLVLLQALAKLNAID----ILKQCFEE 343
LV L A KL D + +Q EE
Sbjct: 562 VIALV-LNAFGKLREFDKADALYRQMHEE 589
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 134/335 (40%), Gaps = 21/335 (6%)
Query: 55 ATGGSVTGALNAYIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYT 112
T G++ L I +G + D+ Y + +L ++H ++ M + K+ +
Sbjct: 652 VTYGTLMNGLCKMITKG--ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVV 709
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKM 170
F+ +D K IA A + + + + TY AL++ +C + A+ +F+ M
Sbjct: 710 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 769
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
+ N ++N L Y ++ + +K L+ QM + + D +TY + H+ +
Sbjct: 770 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 829
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHF 289
+F+EM + TY L K +A + LK +E D Y+
Sbjct: 830 QHAIALFHEMVASGQIP-DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNI 888
Query: 290 LISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEE----- 343
I C L+A ++ L S P +Y +++ L K +D + F +
Sbjct: 889 AIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEND 948
Query: 344 -WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
W + SS + + QK M E L+++
Sbjct: 949 IWSNSTSSRNQK------SLIYQKIMLPEIDLVYS 977
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 129/316 (40%), Gaps = 10/316 (3%)
Query: 60 VTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
VT A N + M K + +++ Y + L K ++H ++ M K+
Sbjct: 166 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 225
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+D K +A A + + N TY AL++ +C + A+ +F+ M
Sbjct: 226 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 285
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ N +++N L Y ++ +K L +M ++ ++ + +TY + H+ +
Sbjct: 286 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 345
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISL 293
+F+EM + TY L+ K +KA LK +E D + Y ++
Sbjct: 346 SLFHEMVARGQIP-DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 404
Query: 294 YCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSY 351
C L+ ++ L S P +Y +++ L K + + F E ++ CS
Sbjct: 405 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 464
Query: 352 DMRLADVIIRAYLQKD 367
D ++I R +L+ +
Sbjct: 465 DCTY-NLITRGFLRNN 479
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 108/282 (38%), Gaps = 40/282 (14%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N TYG L+N CK+ A +F +M N V +N+L +L + + V
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 200 PLVNQMK-----------------------------------QRNISLDNLTYIVWMQSY 224
L+N+M R + + +TY M +
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPR 282
N++D +VF M ++ + +Y+ L + Y K + +KA +++ +E+ P
Sbjct: 266 CLRNEVDVAVKVFDTMVHK-DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP- 323
Query: 283 DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ Y+ LI C+ L DA++ ++ P +Y L L K +D
Sbjct: 324 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 383
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ E D+++ I+ + E+A +F+N +
Sbjct: 384 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 425
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 122 AKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
A+ IA A + F+ + +N + A++ Y + + A++LF +M E N+++
Sbjct: 244 ARFGKIAEARRLFDQMP--IRNVVAWNAMIAAYVQNCHVDEAISLFMEMPE----KNSIS 297
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISL---------------------------DN 214
+ + Y+R+G+ ++ R L+NQM RN++ D
Sbjct: 298 WTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDV 357
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
+ + + YS +D +F +M +D W T + + Y + + + A+K
Sbjct: 358 VCWNTMIAGYSQCGRMDEALHLFKQMVK--KDIVSWNT---MVASYAQV---GQMDAAIK 409
Query: 275 KLEEMKPRDRKAYHFLIS-LYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNA 333
EEMK ++ +++ LIS L N S LDA+ + P +++ L + A L A
Sbjct: 410 IFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAA 469
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+ + KQ + + D+ +++ +I Y + A L+F +
Sbjct: 470 LQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKD 514
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 12/256 (4%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRY 145
K GR A ++E M + + V LD K A + E Y N +
Sbjct: 302 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 361
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +LL+ +CK+ ERA L M + + N V++N + + + + L+ QM
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC-EDKC--RWTTYSNLASIYVK 262
N D +T+ + + +D + YE+ N E C TY++L K
Sbjct: 422 LSNNCVPDIVTFNTIIDAMCKTYRVD----IAYELFNLIQESGCTPNLVTYNSLVHGLCK 477
Query: 263 AELFEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNT 319
+ F++AE L+++ + D Y+ +I C + +D +++ +L P +
Sbjct: 478 SRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 537
Query: 320 SYLVLLQALAKLNAID 335
+Y +++ +L K +D
Sbjct: 538 TYSIVISSLCKWRFMD 553
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 97/236 (41%), Gaps = 4/236 (1%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+A N ++Y +L+ +CK E AL L E+M + V++ + +L Q ++
Sbjct: 75 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
++++M QR + +TY + + + D+DG + +M E + TY+N+
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM-TERGYRPNAITYNNIMHG 193
Query: 260 YVKAELFEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNR-VWGILKSTFPP 316
+ A K++EE P D Y ++ + +D R V ++ P
Sbjct: 194 LCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP 253
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+Y LL L K +D + S ++ + II + + +EA
Sbjct: 254 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 56/307 (18%), Positives = 124/307 (40%), Gaps = 8/307 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ TY ++N K + A+ L E+M + F N ++N + + + + E L+
Sbjct: 43 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLL 102
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYV 261
QM R D ++Y + L+ +D RV +M C+ TY L +
Sbjct: 103 EQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPN--VITYGTLVDGFC 160
Query: 262 KAELFEKAELALKKLEEMKPRDRK-AYHFLISLYCNTSNLDAVNRVWGILK--STFPPTN 318
+ + A ++K+ E R Y+ ++ C+ LD+ +++ ++ + PP
Sbjct: 161 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDV 220
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+Y ++ +L K +D + E S+ S ++ ++ + +EA +
Sbjct: 221 FTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 280
Query: 379 AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRF 438
R+ S + + + + + ++D A + +E + Q + V +D F +
Sbjct: 281 M-TRSGCSPNIV-TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 338
Query: 439 FEEEKDV 445
+ E +
Sbjct: 339 GKAEDAI 345
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 8/249 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K R +AL ++E M R + ++ K + + A + + + + N
Sbjct: 91 KANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVI 150
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TYG L++ +C+ + A+ L KM E + N + +NN+ + + L +M
Sbjct: 151 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEM 210
Query: 206 KQR-NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKA 263
++ + D TY + S +D R+ M ++ C TYS+L KA
Sbjct: 211 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN--VVTYSSLLHGLCKA 268
Query: 264 ELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSY 321
++A L+++ + Y+ +I +C +D A + + ++ P +Y
Sbjct: 269 GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 328
Query: 322 LVLLQALAK 330
VLL A K
Sbjct: 329 TVLLDAFCK 337
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/315 (17%), Positives = 133/315 (42%), Gaps = 18/315 (5%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N TY +LL+ CK + A AL ++M N V +N + + +LG+ ++
Sbjct: 252 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYH 311
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLN---DIDGVERVFYE---MCNECEDKCRWTTYS 254
L+ +M + +TY V + ++ D G+ V E + N TY+
Sbjct: 312 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN-------LFTYN 364
Query: 255 NLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKS 312
+L ++ K + E+A +L +++ + +Y+ +I+ C + + + V + +L +
Sbjct: 365 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 424
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P ++ ++ A+ K +DI + F + + ++ + ++ + +++A
Sbjct: 425 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 484
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTV 432
+ ++ S + + + +S+++D A LS+ + +
Sbjct: 485 EYLLREMTRKQGCSPDII-TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVI 543
Query: 433 DTF--FRFFEEEKDV 445
+ +RF +E +V
Sbjct: 544 SSLCKWRFMDEANNV 558
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 22/293 (7%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-AKNRYTYGAL 150
++ A +++ ME R + + + + +A ++ + + A + TY L
Sbjct: 49 FQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTIL 108
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
++ CK A + E M E N V +N L + +LG ++ L NQM + +
Sbjct: 109 VDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSC 168
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-ECEDKCRWTTYSNLASIYVKA----EL 265
S D TY + + Y ++ EM CE + TY+ L VK+ +
Sbjct: 169 SPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN--FITYNTLMDSLVKSGKYIDA 226
Query: 266 FEKAELALKKLEEMKPRDRKAYHF----LISLYCNTSNLDAVNRVWGIL--KSTFPPTNT 319
F A++ L+ RD K HF +I ++C LD ++ ++ + P T
Sbjct: 227 FNLAQMMLR-------RDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 279
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
Y +++ + N ID +Q E D+ + I+ + +EA
Sbjct: 280 -YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 331
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 129/339 (38%), Gaps = 51/339 (15%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
++ L GR AL M+ R S + + +D K+ I+ A + E
Sbjct: 75 IKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGC 133
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N TY L+N +CK + A+ LF +M E + +N L Y + +P+
Sbjct: 134 APNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAK 193
Query: 201 LVNQMKQRNISLDNLTYIVWMQSY-----------------------SHLN---DID--- 231
L+ +M + + +TY M S SH ID
Sbjct: 194 LLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFC 253
Query: 232 --GVERVFYEMCNECEDKCRWT---TYSNLASIYVKAELFEKAELALKKLEEMK-PRDRK 285
G + YE+ D+ TY+ + S +A + A L+++ E P D
Sbjct: 254 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 313
Query: 286 AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLV-------LLQALAKLNAIDILK 338
Y+ ++S C S +D V+ +L+ N Y + L+ L K +D +
Sbjct: 314 TYNSIVSGLCKASQVDEAYEVYEVLR------NGGYFLDVVTCSTLIDGLCKSRRLDDAE 367
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ E E S+ D+ ++I + + D +++ F+
Sbjct: 368 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 406
>gi|302801852|ref|XP_002982682.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
gi|300149781|gb|EFJ16435.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
Length = 414
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 161/400 (40%), Gaps = 45/400 (11%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
Y +R KFG+ R E+ +WM K+ +D + L+L + + A ++ +E
Sbjct: 11 YKLRITAKFGQAR---EICDWMIRNKVFEIEESDHVLLLELVGRISKFQATRCFWEMPAE 67
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
++ Y A+L + + A +M L + +N + MY R + +KVR
Sbjct: 68 L-RSEAAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDKVR 126
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+ +++ ++ D TY++ +++ + DG+E + +E +
Sbjct: 127 AMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIEAEVRKFLDE--------------QL 172
Query: 260 YVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TN 318
+ LF Y ++ +Y +L A+ + IL TF ++
Sbjct: 173 TSRQPLF-------------------IYECMLRIYTLLRDLTAIENLRSILLKTFKKFSS 213
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+SY LL A +L ++ ++ F E ++ + +++ +I Y E+A ++
Sbjct: 214 SSYNCLLDAYRQLGEVERAERLFNEIGNKF-TLNIQSYRAMIAVYASNGRMEKANELY-- 270
Query: 379 AKKRANASARFFKSRESFMIY-YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
K+ A + M+ Y+ +R AL + A + H +P++ T R
Sbjct: 271 -KQLFRAGFECHPAIYHAMVAGYIDARDHSNALIQYGKAWDRSLLGHPKPLRATTLLVLR 329
Query: 438 FFEEEKDVDGAEEFCKVLK-SLNCLDFSAYSLLIKTYIAA 476
E+ D AE + LK D Y+ L+K YI A
Sbjct: 330 VLAEQGDFSRAESIVRDLKRERQGSDVEVYNWLLKAYIKA 369
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 10/221 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ Y K + AL LF +M + V++N L ++Y +LG+ E+ +
Sbjct: 360 NVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVC 419
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+M+ I D +TY + Y + V+RVF EM E TYS L +Y K
Sbjct: 420 KEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAE-RIFPNLLTYSTLIDVYSK 478
Query: 263 AELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
L+++ A++ E K KA Y LI C ++ AV+ + + K P
Sbjct: 479 GGLYQE---AMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPN 535
Query: 318 NTSYLVLLQALAKLNAID-ILKQCFEEWESRCSSYDMRLAD 357
+Y ++ A + + + ++ +E S+ SS +++ +
Sbjct: 536 VVTYNSIIDAFGRSGSAECVIDPPYETNVSKMSSSSLKVVE 576
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 115/278 (41%), Gaps = 23/278 (8%)
Query: 110 SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLN-CYCKELMTERALALFE 168
Y D A+ + T K++G+ N TY A+++ C + RA +F+
Sbjct: 234 GYCDEAIKVFETMKSSGLK-------------PNLVTYNAVIDACGKGGVDFNRAAEIFD 280
Query: 169 KMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN 228
+M + + FN+L + R G E R L ++M R I D TY + +
Sbjct: 281 EMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGG 340
Query: 229 DIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDR 284
+D ++ EM + TYS + Y KA ++ AL EMK DR
Sbjct: 341 QMDLAFQIMSEMPRK-HIMPNVVTYSTVIDGYAKAGRLDE---ALNLFNEMKFASIGLDR 396
Query: 285 KAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
+Y+ L+S+Y +A+N + S +Y LL K + +K+ FEE
Sbjct: 397 VSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEE 456
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
++ ++ +I Y + +Y+EA +F KK
Sbjct: 457 MKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKK 494
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 130 AEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
AE+ F L E + + TY +LL + KE ++ E++ + F N + +N +
Sbjct: 347 AERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIH 406
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
MY ++G+ + L ++M+ + D +TY V + S +N I +V +M + K
Sbjct: 407 MYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDM-TDAGLK 465
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNR 305
+S L Y K AE + +KP DR AY ++ ++ + + + +
Sbjct: 466 PTLIAFSALICAYAKGGRRADAENTFDCMIASGVKP-DRLAYLVMLDVFARSGDTEKMLC 524
Query: 306 VW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRC 348
++ ++ + P + Y VLL ALAK + + +++ ++ E C
Sbjct: 525 LYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLC 568
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 108/271 (39%), Gaps = 19/271 (7%)
Query: 68 IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
I G D + +R+L GR V+E ++ S + + LD AK +
Sbjct: 807 IKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDV 866
Query: 128 AAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
K +NG+ + Y N + Y ++++ C + +M+ F + N L
Sbjct: 867 FEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNAL 926
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSH-LNDIDGVERVFYEMCNEC 244
MY G ++ + + + + D TY + Y +G + + NE
Sbjct: 927 LNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEG-----FTLLNEM 981
Query: 245 EDKC---RWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNT 297
+ + +Y +L + KAEL E+A+ + EEM+ + +R YH ++ +Y N
Sbjct: 982 GKRGLTPKLQSYKSLLAASAKAELREQAD---QIFEEMRSKSYQLNRSIYHMMMKIYRNA 1038
Query: 298 SNLDAVNRVWGILK-STFPPTNTSYLVLLQA 327
N + ++K PT + +L+ +
Sbjct: 1039 GNHSKAENLLAVMKEDGIEPTIATMHILMTS 1069
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 130 AEKYFNGLSEYAK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
AE GL + + +R + AL++ Y + + E+A A+F+ M + L + N +
Sbjct: 765 AEILVKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRA 824
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC 248
+ G+ +++ +V +++ N + T ++ + +++ D+ V +++ M
Sbjct: 825 LIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGM-KAAGYLP 883
Query: 249 RWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
Y ++ S+ F EL + ++E KP D + L+++Y N D +V
Sbjct: 884 NMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKP-DLAILNALLNMYTAAGNFDRTTQV 942
Query: 307 W-GILKSTFPPTNTSYLVLL 325
+ IL++ P +Y L+
Sbjct: 943 YRSILEAGLEPDEDTYNTLI 962
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 52/275 (18%)
Query: 70 EGKTVR--KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
EG TV+ M+ RS GR+ A ++++ M R + F ++ +K+ +
Sbjct: 217 EGATVQVFNAMMGVYARS----GRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCL 272
Query: 128 AAA-------EKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
AA E +GL + TY L++ + E A+ +FE M + +
Sbjct: 273 AAGVALDLLFEVRQSGLR---PDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLW 329
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+N + +++ R G+ E+ L ++ ++ D +TY + +++ ++D VE
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVE------ 383
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL 300
+ CE VKA F+K E+ Y+ +I +Y L
Sbjct: 384 -HTCEQ-------------LVKAG-FKKNEI--------------TYNTMIHMYGKMGRL 414
Query: 301 DAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAI 334
D ++ +++ P +Y V++ +L K+N I
Sbjct: 415 DLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRI 449
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 12/264 (4%)
Query: 120 LTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
L+ NG K+FN + + A + +TY +++ CKE E + LF +M E+
Sbjct: 205 LSKSGNG-QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSP 263
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ V +N+L Y ++G E+V L N+MK D +TY + Y + F
Sbjct: 264 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 323
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISL 293
EM N K TYS L + K + + A+K L +M+ + Y LI
Sbjct: 324 SEMKNN-GLKPNVVTYSTLIDAFCKEGMMQG---AIKLLXDMRRTGLLPNEFTYTSLIDA 379
Query: 294 YCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
C NL +A + +L++ +Y LL L K + ++ F S +
Sbjct: 380 NCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 439
Query: 353 MRLADVIIRAYLQKDMYEEAALIF 376
++ ++ Y++ + E+A I
Sbjct: 440 QQVYTALVHGYIKAERMEDAMKIL 463
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 115/286 (40%), Gaps = 22/286 (7%)
Query: 109 FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMTERALAL 166
F+YT +D K + A K N + + N TY ALL+ CK A +
Sbjct: 371 FTYTSL---IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEV 427
Query: 167 FEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY--IVWMQSY 224
F M + N + L Y++ + E ++ QM + NI D + Y I+W +
Sbjct: 428 FRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW--GH 485
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE--KAELALKKLEEMKPR 282
++ + + EM K R + + + S + F+ K+ AL +EM+
Sbjct: 486 CSQRKLEETKLILEEM------KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDV 539
Query: 283 DRKA----YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
+A Y LI C ++ AV+ +L P Y L+ L N I+
Sbjct: 540 GVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESA 599
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
K+ F+E + R + D+ +I L+ +EA ++ + + A
Sbjct: 600 KKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645
>gi|357135236|ref|XP_003569217.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Brachypodium distachyon]
Length = 644
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 159/392 (40%), Gaps = 60/392 (15%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGA 149
Y A+E+I + R + + L + A N AE YF L + + N + Y +
Sbjct: 200 YAKAMELINELNYRGLQMDSVIYGTLLAICASHNYCEEAEVYFQKLKDEGHNPNLFHYSS 259
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
LLN Y + E+A L + + K + N V L +Y + G EK + L+ +++
Sbjct: 260 LLNAYSENSNYEKAELLMKDLRSSKLIPNKVILTTLLKVYSKGGLFEKAKELLTELEASG 319
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ D + Y + + + + I +F EM E K +S + S +A E+A
Sbjct: 320 FAQDEMPYCILIDALAKGGKIWEATMLFNEM-KEKGVKSDGYAFSIMISALHRAGYREEA 378
Query: 270 ELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQA 327
+ K+ E+ D + + YCNT++ ++V R+ + P + ++ L++
Sbjct: 379 KQLAKEFEDQNTTYDLVILNTSLRAYCNTNDTESVMRMLKKMDELNISPDHITFNTLIRY 438
Query: 328 LAKLNAIDILKQCFEEWESR---------------------------------------C 348
K ++ + E+ ++ C
Sbjct: 439 FCKGKVYHLVYKTIEDMHTKGHQLNEELCSEVMLQLGEAGFPSEALSVYNMMRYSKRTVC 498
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDL 408
S ++ +++ A L KD Y +I +NA+ + +S E F I ++ S ++L
Sbjct: 499 KSLHEKVLSILVPAGLLKDAY---IVIKDNAELISP------RSLEKFAIQFMTSGNINL 549
Query: 409 ALNEMEAALSEAKQFHWRPMQVTVDTFFRFFE 440
+N++ AL+ + WR ++ DTF R +
Sbjct: 550 -INDVMKALNHSG---WR---ISQDTFGRAIQ 574
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 120/308 (38%), Gaps = 45/308 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ +CK + A L +M E T + L T++ +L L +M
Sbjct: 232 TYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEM 291
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY--SNLASIYVKA 263
+ + D TY ++ ID FYEM E CR T +N+ + KA
Sbjct: 292 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQRE---GCRPDTVVMNNMINFLGKA 348
Query: 264 ELFEKA-----ELA--------------LKKLEEMKPRDRKA------------------ 286
+ A E+ +K L E K R +
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 408
Query: 287 YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
Y LI +C T+ ++ A+ + + + FPP +Y L+ AL K D+ + F+E +
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQ 405
C S R+ V+I+ + ++A +F+ K A + + + M R+
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVY--AYNALMSGLARTGM 526
Query: 406 LDLALNEM 413
LD AL+ M
Sbjct: 527 LDEALSTM 534
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 81 YC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS 138
YC + +L K RY A E+ + ++ S +AV + K + A F+ ++
Sbjct: 444 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMN 503
Query: 139 EY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+ A + Y Y AL++ + M + AL+ +M E + + ++N + + G P
Sbjct: 504 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 563
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+ +++ MKQ + D ++Y + + SH + ++ EM
Sbjct: 564 RAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEM 607
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 131/309 (42%), Gaps = 10/309 (3%)
Query: 67 YIMEGKTVRKD--MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
Y M+ + R D ++ + L K GR A+++ + M + + S + + ++
Sbjct: 324 YEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFES 383
Query: 125 NGIAA-AEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
A+ +F + E + + +TY L++ +CK E+A+ L E+MDE F A
Sbjct: 384 KSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAA 443
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
+ +L + + + L ++K+ S Y V ++ +D +F EM
Sbjct: 444 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM- 502
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSN 299
N+ Y+ L S + + ++A +++++E P D +Y+ +++ T
Sbjct: 503 NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP-DINSYNIILNGLAKTGG 561
Query: 300 LD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
A+ + + +ST P SY +L AL+ + + EE + YD+
Sbjct: 562 PHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSS 621
Query: 359 IIRAYLQKD 367
I+ A + D
Sbjct: 622 ILEAIGKVD 630
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 133/332 (40%), Gaps = 24/332 (7%)
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL-DNLTY 217
M +A+A+F ++ K A+N++ M + GQ KV L N+M D +TY
Sbjct: 174 MVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTY 233
Query: 218 IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT--YSNLASIYVKAELFEKAELALKK 275
+ ++ L D ++ EM E+ + TT Y+ L +++ K + AL
Sbjct: 234 SALISAFCKLGRRDSATQLLNEM---KENGMQPTTKIYTMLITLFFK---LDDVHGALSL 287
Query: 276 LEEMKPR----DRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAK 330
EEM+ + D Y LI +D A + + + + P ++ L K
Sbjct: 288 FEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGK 347
Query: 331 LNAIDILKQCFEEWES-RCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF 389
+D + F+E + RC + +I + K E F K+ + + F
Sbjct: 348 AGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 407
Query: 390 FKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAE 449
S + + ++ +++ A+ L E + + P + + K D A
Sbjct: 408 TYS--ILIDGFCKTNRMEKAM----MLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 450 EFCKVLKSLNCLDFSA--YSLLIKTYIAAGKL 479
E + LK NC SA Y+++IK AG+L
Sbjct: 462 ELFQELKE-NCGSSSARVYAVMIKHLGKAGRL 492
>gi|242049534|ref|XP_002462511.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
gi|241925888|gb|EER99032.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
Length = 643
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+G ++ YC+E E AL ++M + + N V FN L +L + V ++ M
Sbjct: 284 TWGIIIGGYCRESRLEEALRCVQQMKDAGIVPNVVIFNTLLKGFLDVNDMAAVNNILGLM 343
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+Q I D +TY + ++S L + +VF +M E + YS LA +V+A+
Sbjct: 344 EQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMI-EAGIEPDPQVYSILAKGFVRAKQ 402
Query: 266 FEKAELALKKLEEMKP-RDRKAYHFLISLYCNTSNLDAVNRVW 307
EKAE L ++ + + + +IS +C+ +++++ RV+
Sbjct: 403 PEKAEDLLLQMSHLGVCPNVVTFTTVISGWCSVADMESAMRVY 445
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 20/220 (9%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
YC S R AL ++ M+ + + F L N +AA + ++
Sbjct: 292 YCRES-----RLEEALRCVQQMKDAGIVPNVVIFNTLLKGFLDVNDMAAVNNILGLMEQF 346
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ TY LN + + + +F+KM E + ++ L+ ++R QPEK
Sbjct: 347 GIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGFVRAKQPEKA 406
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
L+ QM + + +T+ + + + D++ RV+ +M C+ Y NL +
Sbjct: 407 EDLLLQMSHLGVCPNVVTFTTVISGWCSVADMESAMRVYEKM-------CKSGVYPNLRT 459
Query: 259 I------YVKAELFEKAELALKKLEEMKPRDRKAYHFLIS 292
Y + + KAE L+ + E + +++ H LI+
Sbjct: 460 FETLIWGYSEQKQPWKAEEVLQMMRETGVKPKESTHRLIA 499
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 43/276 (15%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ + K + A+ LF++M E + L +Y +LG+ E+ LV++M
Sbjct: 233 TYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEM 292
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY--SNLASIYVKA 263
+ R TY ++ ++ V+ M +D C+ +NL +I ++
Sbjct: 293 RMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNML---KDGCKPDVVLMNNLINILGRS 349
Query: 264 -------ELFEKAEL------------ALKKLEEMKPRDRKA------------------ 286
ELFE+ L +K L E K +A
Sbjct: 350 DRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFT 409
Query: 287 YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
Y LI +C T+ ++ A+ + + + FPP +Y L+ +L K + + F+E +
Sbjct: 410 YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELK 469
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
C S +R+ V+I+ + + + EA +FN KK
Sbjct: 470 ENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKK 505
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 131/334 (39%), Gaps = 20/334 (5%)
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM-KQRNISLDNLTY 217
M +AL++F ++ K +N++ M ++ G EKV L N+M + + D +TY
Sbjct: 175 MVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTY 234
Query: 218 IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE 277
+ ++ LN D R+F EM E + Y+ L IY K K E AL +
Sbjct: 235 SALISAFGKLNRDDSAVRLFDEM-KENGLQPTAKIYTTLMGIYFK---LGKVEEALNLVH 290
Query: 278 EMKPRD-RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAK-LNAID 335
EM+ R + L V +G+ K+ +VL+ L L D
Sbjct: 291 EMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSD 350
Query: 336 ILKQCFEEWES----RCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK 391
LK+ E +E C+ + +I + K EA+ KK + F
Sbjct: 351 RLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTY 410
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
S + + ++ +++ AL L E + + P + + K + A E
Sbjct: 411 S--ILIDGFCKTNRVEKAL----LLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANEL 464
Query: 452 CKVLKSLNCLDFS--AYSLLIKTYIAAGKLASDM 483
+ LK NC S Y+++IK + G+ M
Sbjct: 465 FQELKE-NCGSSSVRVYAVMIKHFGKCGRFNEAM 497
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 97/227 (42%), Gaps = 7/227 (3%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+TY L++ +CK E+AL L E+MDE F A+ +L + + E L +
Sbjct: 408 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQE 467
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-ECEDKCRWTTYSNLASIYVKA 263
+K+ S Y V ++ + + +F EM C Y+ L + V+A
Sbjct: 468 LKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDV--YAYNALITGMVRA 525
Query: 264 ELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTS 320
++ ++A + +EE P D +++ +++ T ++ +K ST P S
Sbjct: 526 DMMDEAFSLFRTMEENGCNP-DINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVS 584
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
Y +L L++ + + +E S+ YD+ I+ A + D
Sbjct: 585 YNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVD 631
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 125/332 (37%), Gaps = 10/332 (3%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
G + AL Y D L Y V L K R R A++V++ M S + T
Sbjct: 19 GRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLT 78
Query: 116 VYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDEL 173
V + + + A + + A N TY AL++ CK + A+AL E M E
Sbjct: 79 VVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAER 138
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
V +N++ T + R + ++ + QM D +TY + + D+
Sbjct: 139 GCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRG 198
Query: 234 ERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK-AYHFLIS 292
+ E+ TYS + KA A+ EEM Y+ LI
Sbjct: 199 LELLGEVTRRGFTP-DIVTYSTVIDGLCKAGRLRD---AVDIFEEMSCAPTAITYNSLIG 254
Query: 293 LYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSY 351
YC ++D R+ G ++ P +Y L+ A K+ +D + F++ + S
Sbjct: 255 GYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 314
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
D+ ++ + E+A + +R
Sbjct: 315 DVVTFTSLVDGLCGEGRMEDALELLEEITRRG 346
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 113/303 (37%), Gaps = 24/303 (7%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF-AVYLDLTAKTNGIAAAEKYFNGLSEYA 141
+ L K GR R A+++ E M +Y Y I K + + A
Sbjct: 221 IDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD--DKCA 278
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+ TY L++ +CK + A LF++M K + V F +L G+ E L
Sbjct: 279 PDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALEL 338
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW-----TTYSNL 256
+ ++ +R TY + Y N + E + + + R TY+ L
Sbjct: 339 LEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADF------RSRGFVPNTVTYNIL 392
Query: 257 ASIYVKAELFEKAELALKKLEEMK------PRDRKAYHFLISLYCNTSNL-DAVNRVWGI 309
+ +A + + AL+ L+++ P Y ++ C DAV +
Sbjct: 393 VAGCCRA---GRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 449
Query: 310 LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMY 369
++ + P ++ ++ AL K + + EE + D ++ AY + M
Sbjct: 450 IQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMI 509
Query: 370 EEA 372
++A
Sbjct: 510 QKA 512
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 147/374 (39%), Gaps = 60/374 (16%)
Query: 45 KLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES 104
K+++++++ G G VT N+++ SL K GR + A E+ ++M +
Sbjct: 355 KMFRKMTSKGLIPGIVT--FNSFM---------------SSLCKHGRSKDAEEIFQYMTT 397
Query: 105 RKMHFSYTDFAVYLDLTAKTN---------------GIAAAEKYFNGL-SEYAK------ 142
+ +++ L A GI A FN L S +AK
Sbjct: 398 KGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDE 457
Query: 143 ---------------NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
+ TY L++ +C+ A+ F +M + NTV +++L
Sbjct: 458 AMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIH 517
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYI-VWMQSYSHLNDIDGVERVFYEMCNECED 246
+ G K + LV++M + I N+ + + S + + VF + D
Sbjct: 518 GFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVF-NLVIHIGD 576
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAV 303
+ T+++L Y EKA L + ++P D Y+ L+S YC + + D +
Sbjct: 577 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP-DVVTYNTLVSGYCKSGKIDDGL 635
Query: 304 NRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
+L PT +Y ++L L K+ F E ++ D+ ++++
Sbjct: 636 ILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGL 695
Query: 364 LQKDMYEEAALIFN 377
+ D+ +EA +F+
Sbjct: 696 CRNDLTDEAITLFH 709
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 3/223 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ +L++ YC E+A + + M + + V +N L + Y + G+ + L +M
Sbjct: 582 TFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREM 641
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + +TY + + H +++F+EM + TY L + +L
Sbjct: 642 LHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDS-GTAVDIDTYKILLKGLCRNDL 700
Query: 266 FEKAELALKKLEEMKPR-DRKAYHFLI-SLYCNTSNLDAVNRVWGILKSTFPPTNTSYLV 323
++A KL M + D + +I +LY +A + I S P ++Y V
Sbjct: 701 TDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGV 760
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
++ L K +++ F E + RL + IIR LQK
Sbjct: 761 MIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQK 803
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 104/245 (42%), Gaps = 5/245 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKM--DELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N +Y ++ C + ++ AL + ++M + + + V+FN + + + G+ K
Sbjct: 226 NAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 285
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+N+M Q+ + D +TY + + +D E V +M ++ + TY+ + Y
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEP-DGLTYTAIIHGY 344
Query: 261 VKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
+ ++++ +K+ + + P F+ SL + + DA + P
Sbjct: 345 SCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDL 404
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
SY +LL A + F + + +++I A+ ++ M +EA L+F
Sbjct: 405 VSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTE 464
Query: 379 AKKRA 383
+ +
Sbjct: 465 MQGQG 469
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 105/265 (39%), Gaps = 40/265 (15%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK + D+ Y + K G + ALE+ E M R + + + + +K
Sbjct: 318 MGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ 377
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ +K F+ + Y AL+N + +RA + +M++ + + V +N
Sbjct: 378 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 437
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L LG+ ++ R L+++M +R I D +TY + YS D+ R+ EM N+
Sbjct: 438 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 497
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYC-NTSNLDAV 303
+ T Y+ LI C N DA
Sbjct: 498 FNPTLLT-----------------------------------YNALIQGLCKNGQGDDAE 522
Query: 304 NRVWGILKSTFPPTNTSYLVLLQAL 328
N V ++++ P +++Y+ L++ L
Sbjct: 523 NMVKEMVENGITPDDSTYISLIEGL 547
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 126/304 (41%), Gaps = 14/304 (4%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRK--MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL- 137
+C R GR + AL+++ M R YT + + K + A K F+ +
Sbjct: 195 FCSR-----GRVQAALDIMREMRERGGIAPNQYT-YGTVISGWCKVGRVDEAVKVFDEML 248
Query: 138 --SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL-GQ 194
E Y AL+ YC + + AL ++M E + + TVA NL L + G+
Sbjct: 249 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFMDGR 307
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ LV +M + ++LD TY + + + ++ +F M T S
Sbjct: 308 GTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 367
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KST 313
+ ++ K ++ E +L + + D Y+ LI+ + + N+D + G + K
Sbjct: 368 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 427
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P + +Y L++ L L +D ++ +E R D+ + +I Y K ++A
Sbjct: 428 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 487
Query: 374 LIFN 377
I N
Sbjct: 488 RIRN 491
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 119/311 (38%), Gaps = 23/311 (7%)
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
A L+ L + A ALF M L+ T FN + G+P + L+ QM +
Sbjct: 124 ASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRP 183
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
N +TY + + + + EM TY + S + K ++
Sbjct: 184 NA----VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDE 239
Query: 269 AELALKKL---EEMKPRDRKAYHFLISLYCNTSNLDAV----NRVWGILKSTFPPTNTSY 321
A ++ E+KP + Y+ LI YC+ LD +R +++ T +Y
Sbjct: 240 AVKVFDEMLTKGEVKP-EAVMYNALIGGYCDQGKLDTALLYRDR---MVERGVAMTVATY 295
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
+L+ AL + EE + + D+ +++I + ++ ++A IF N +
Sbjct: 296 NLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSR 355
Query: 382 RA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFE 440
R A+ + S +IY L + + E + EA + RP V +
Sbjct: 356 RGVRATVVTYTS----LIYALSKKG---QVQETDKLFDEAVRRGIRPDLVLYNALINSHS 408
Query: 441 EEKDVDGAEEF 451
++D A E
Sbjct: 409 TSGNIDRAFEI 419
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 122 AKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNT 179
A T IA A +YF + E + Y Y LL CK + ALA+ +M K NT
Sbjct: 638 AATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNT 697
Query: 180 VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
+N L + R G + L+ QMK+ + + TY ++ + D+ + V E
Sbjct: 698 FVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDE 757
Query: 240 MCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLIS 292
M ++ K TY+ L + +A L ++ ALK EEMK D AYH L++
Sbjct: 758 M-SDVGLKPNLKTYTTLIKGWARASLPDR---ALKCFEEMKLAGLKPDEAAYHCLVT 810
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y ++++ Y ++ L +FE++ E F + +++ L +Y+++G+ K + +M+
Sbjct: 420 YHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEME 479
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
I +N TY + + + HL+D R+F EM R Y+ L + K
Sbjct: 480 SSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDR-AIYNLLIEAFCKMGNM 538
Query: 267 EKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLV 323
++A L+K+ E M+P +R A+ +I + ++ + ++ +S PT +Y
Sbjct: 539 DRAIRILEKMQKERMQPSNR-AFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNA 597
Query: 324 LLQALAKLNAID 335
L+ L + N ++
Sbjct: 598 LIHGLIRKNQVE 609
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 92/238 (38%), Gaps = 7/238 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R +G ++ Y K A A FE M N F +L Y
Sbjct: 276 SRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCT 335
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK I L +TY + + + +ND + +F E D YSN+ + +
Sbjct: 336 EEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGD-LNGIIYSNIIHAHCQ 394
Query: 263 AELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+ ++AE + ++EE P D AYH ++ Y + V+ LK F P+
Sbjct: 395 SGNMDRAEELVHEMEEDGIDAPID--AYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSI 452
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY L+ K+ + +E ES ++ + ++I ++ + A IF
Sbjct: 453 ISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIF 510
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 123/290 (42%), Gaps = 7/290 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ +L ++H ++ M + K+ + F+ +D K + A + + +
Sbjct: 241 IHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 300
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY AL++ +C + A+ +F+ M F + V+++ L Y ++ + EK
Sbjct: 301 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 360
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M ++ + + +TY M H+ + +F+EM + + +Y L
Sbjct: 361 LFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP-DFVSYCILLDYL 419
Query: 261 VKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPT 317
K ++A LK +E M P D + Y +I C L+A ++ L S P
Sbjct: 420 CKNRRLDEAIALLKAIEGSNMDP-DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 478
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
+Y +++ L + + + F E + + S + ++I R +L+ +
Sbjct: 479 VWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNN 528
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 134/326 (41%), Gaps = 17/326 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G+ + +++ Y + L K G A+ ++ ME + +D K
Sbjct: 155 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 214
Query: 127 IAAAEKYFNGLSE-----YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ A FN SE + + +TY +L++ C + AL +M K + N V
Sbjct: 215 VTQA---FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVI 271
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
F+ + + G+ + +V+ M +R + + +TY M + +++D +VF M
Sbjct: 272 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMV 331
Query: 242 NECED-KCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTS 298
C+ +YS L + Y K + EKA +++ +E+ P + Y L+ C+
Sbjct: 332 --CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIP-NTVTYSTLMHGLCHVG 388
Query: 299 NL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
L DA+ ++ P SY +LL L K +D + E D+++
Sbjct: 389 RLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYT 448
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRA 383
++I + E A +F+N +
Sbjct: 449 IVIDGMCRAGELEAARDLFSNLSSKG 474
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 8/171 (4%)
Query: 77 DMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
D + YC+ L K R A+ +++ +E M + + +D + + AA F
Sbjct: 408 DFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 467
Query: 135 NGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
+ LS N +TY ++N C++ + A LF +M + N +N ++ +LR
Sbjct: 468 SNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN 527
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+ + L+ +M R S D T V ++ S DG+++ ++ +E
Sbjct: 528 NETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD----DGLDQSVKQILSE 574
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 7/238 (2%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLN 152
AL V+E M RK+ + L + +A ++F+ + A + TY ++N
Sbjct: 345 ALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMIN 404
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
C+ + E A L ++M + + V + L Y + G+ + + N M QR ++
Sbjct: 405 GLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTP 464
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
+ +TY D+ + +EM N+ + TY++L + KA E+A
Sbjct: 465 NVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE-LNACTYNSLINGLCKAGYLEQAMRT 523
Query: 273 LKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQA 327
+ ++ +KP D Y LI C + +LD A + + +L PT +Y VL+
Sbjct: 524 MADMDTACLKP-DVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNG 580
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY L++ CK +RA +L ++M + V +N L + G+ E + L++
Sbjct: 537 YTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDW 596
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
M ++NI + TY M+ Y N++ ++ M
Sbjct: 597 MLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGM 632
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 172/413 (41%), Gaps = 34/413 (8%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL----S 138
++ L K GR AL ++E M R ++ ++ K + I A+++ G+ S
Sbjct: 56 IQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTIS 115
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKM-DELKFLGNTVAFNNLSTMYLRLGQPEK 197
A + ++Y +LLN CK +A A+F M E + + V+++ L + ++ + +
Sbjct: 116 TRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGR 175
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNL 256
L QM N + TY ++ I + V+ EM + C TYS L
Sbjct: 176 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPD--VITYSTL 233
Query: 257 ASIYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVW-GILK 311
+ L K + A + E M R + Y+ L+ C S D + ++ +++
Sbjct: 234 IHGF---SLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
P +Y LL + I+ + F+E S+ D+ + +++ + + E
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350
Query: 372 AALIFNNAKKRANASARFFKSRESFMIYYL-RSRQLDLALNEMEAALSEAKQFHW-RPMQ 429
A +F R + + MI L ++++LD A+ E +Q H P
Sbjct: 351 ARQLFQVMVSR---ECKPDTVSHNIMIDGLSKAKRLDDAVEVFE----RMEQDHGCSPDL 403
Query: 430 VTVDTF-FRFFEEEKDVDGAEEFCKVLKSLNCLDFS----AYSLLIKTYIAAG 477
VT ++ F E++ E KV K ++ L S A+++L++ AAG
Sbjct: 404 VTYNSLIFGLCGEQR----LSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 124/282 (43%), Gaps = 9/282 (3%)
Query: 74 VRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
+R D++ Y + + + A+ V E M + + + + + + AE
Sbjct: 289 LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAE 348
Query: 132 KYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
+ F L E + + TY +LL + KE ++ E++ + F N + +N + MY
Sbjct: 349 RLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMY 408
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR 249
++G+ + L ++M+ + D +TY V + S +N I +V +M + K
Sbjct: 409 GKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDM-TDAGLKPT 467
Query: 250 WTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
+S L Y K AE + +KP DR AY ++ ++ + + + + ++
Sbjct: 468 LIAFSALICAYAKGGRRADAENTFDCMIASGVKP-DRLAYLVMLDVFARSGDTEKMLCLY 526
Query: 308 -GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRC 348
++ + P + Y VLL ALAK + + +++ ++ E C
Sbjct: 527 RKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELLC 568
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 108/275 (39%), Gaps = 27/275 (9%)
Query: 68 IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
I G D + +R+L GR V+E ++ S + + LD AK +
Sbjct: 807 IKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDV 866
Query: 128 AAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
K +NG+ + Y N + Y ++++ C + +M+ F + N L
Sbjct: 867 FEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNAL 926
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF-----YEM 240
MY G ++ + + + + D TY + Y R F + +
Sbjct: 927 LNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYC---------RSFRPEEGFTL 977
Query: 241 CNECEDKC---RWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISL 293
NE + + +Y +L + KAEL E+A+ + EEM+ + +R YH ++ +
Sbjct: 978 LNEMGKRGLTPKLQSYKSLLAASAKAELREQAD---QIFEEMRSKSYQLNRSIYHMMMKI 1034
Query: 294 YCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQA 327
Y N N + ++K PT + +L+ +
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTS 1069
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 130 AEKYFNGLSEYAK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
AE GL + + +R + AL++ Y + + E+A A+F+ M + L + N +
Sbjct: 765 AEILVKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRA 824
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC 248
+ G+ +++ +V +++ N + T ++ + +++ D+ V +++ M
Sbjct: 825 LIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGM-KAAGYLP 883
Query: 249 RWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
Y ++ S+ F EL + ++E KP D + L+++Y N D +V
Sbjct: 884 NMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKP-DLAILNALLNMYTAAGNFDRTTQV 942
Query: 307 W-GILKSTFPPTNTSYLVLL 325
+ IL++ P +Y L+
Sbjct: 943 YRSILEAGLEPDEDTYNTLI 962
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 52/275 (18%)
Query: 70 EGKTVR--KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
EG TV+ M+ RS GR+ A ++++ M R + F ++ +K+ +
Sbjct: 217 EGATVQVFNAMMGVYARS----GRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCL 272
Query: 128 AAA-------EKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
AA E +GL + TY L++ + E A+ +FE M + +
Sbjct: 273 AAGVALDLLFEVRQSGLR---PDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLW 329
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+N + +++ R G+ E+ L ++ ++ D +TY + +++ ++D VE
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVE------ 383
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL 300
+ CE VKA F+K E+ Y+ +I +Y L
Sbjct: 384 -HTCEQ-------------LVKAG-FKKNEI--------------TYNTMIHMYGKMGRL 414
Query: 301 DAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAI 334
D ++ +++ P +Y V++ +L K+N I
Sbjct: 415 DLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRI 449
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 127/300 (42%), Gaps = 18/300 (6%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
L + G+ A + + M + + S + + K + A + NG+ E N
Sbjct: 441 LCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPN 500
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY L+ K+ E A +F++M + FN++ ++G+ + R +N
Sbjct: 501 AITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLN 560
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+++ ++TY + Y ID E V+ EMC E TY++L + + K+
Sbjct: 561 TFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRS-EISPNVITYTSLINGFCKS 619
Query: 264 ELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTN 318
K +LALK ++MK + D Y LI+ +C +++ + + +L+ P
Sbjct: 620 ---NKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNT 676
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK-------DMYEE 371
Y +++ A LN ++ +E + D+++ +I L++ D+Y E
Sbjct: 677 IVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSE 736
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 10/230 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ L K GR A + + + + + +D K I +AE + + SE
Sbjct: 543 INGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEI 602
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N TY +L+N +CK + AL + + M + + L + ++ E
Sbjct: 603 SPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACK 662
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+++ + ++ + + Y + + +Y +LN+++ + EM N + C Y++L
Sbjct: 663 FFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINN-KIPCDLKIYTSLIDGL 721
Query: 261 VKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRV 306
+K K AL EM R D Y+ LI+ CN L+ ++
Sbjct: 722 LKE---GKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKI 768
>gi|297829500|ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
gi|297328472|gb|EFH58891.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
Length = 772
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK----- 142
K GR ++E M + S+ D Y + + ++ L+E A+
Sbjct: 420 KNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVKAGLMDRARQVLAEMARMGVPA 479
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFL-GNTVAFNNLSTMYLRLGQPEKVRPL 201
NR TY LL YCK+L +RA L +M E + + V++N + + +
Sbjct: 480 NRITYNVLLKGYCKQLQIDRAEDLLREMAEDAGIEPDVVSYNIIIDGCILIDDSAGALAF 539
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
N+M+ R I+ ++Y M++++ RVF EM N+ K ++ L Y
Sbjct: 540 FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYC 599
Query: 262 KAELFEKAELALKKLEE 278
+ L E A+ + +++E
Sbjct: 600 RLGLIEDAQRVVSRMKE 616
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 9/265 (3%)
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I+ A KYF+ + + +Y +++C+ K ERAL + M E F N V FN
Sbjct: 406 ISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNT 465
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L YL+LG + + + + + D +T+ + H + +D F EM +E
Sbjct: 466 LINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEM-SEW 524
Query: 245 EDKCRWTTYSNLASIYVKAELFEKA-ELALK-KLEEMKPRDRKAYHFLISLYCNTSNLDA 302
+ TY+ L A KA EL K K++ + P D +++ I +C ++
Sbjct: 525 GVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITP-DAYSFNAPILSFCRMRKIEK 583
Query: 303 VNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES-RCSSYDMRLADVII 360
+++ + + P + +Y L++AL +D K+ ES C ++
Sbjct: 584 AQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVV 643
Query: 361 RAYLQKDMYEEAALIFNNAKKRANA 385
A + + EA + F N R NA
Sbjct: 644 GALTKMGRFSEAGM-FMNKLHRKNA 667
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 170/408 (41%), Gaps = 31/408 (7%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME +R +++ Y V R A+ V+E M+ + + S T+ A Y L
Sbjct: 241 MERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGV--SATE-ATYRSLVHGAFR 297
Query: 127 IAAAEKYFNGLSEYAKNRYT-----YGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
E+ + LSE+ ++ T Y LL C K M + A+ L +KM + +L +
Sbjct: 298 CLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTT 357
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
F+ + +++ + + LV+ ++ +L YI+ ++S+ DI + F +M
Sbjct: 358 FSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMV 417
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA-------YHFLISLY 294
++ S++ S + + F KA + LE +K ++ LI+ Y
Sbjct: 418 SD-------GLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGY 470
Query: 295 CNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
N+ DA + +++ P ++ L+ L + +D CF E ++
Sbjct: 471 LKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNV 530
Query: 354 RLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEM 413
+ +V+I +A + N K + S + ++ + R R+++ A
Sbjct: 531 QTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAY--SFNAPILSFCRMRKIEKA---- 584
Query: 414 EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+ ++ ++ P T + + +E+ VD A+E ++S++C+
Sbjct: 585 QKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCI 632
>gi|297729251|ref|NP_001176989.1| Os12g0531500 [Oryza sativa Japonica Group]
gi|255670362|dbj|BAH95717.1| Os12g0531500 [Oryza sativa Japonica Group]
Length = 352
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 298 SNLDAVNRVWGILKSTFPP-TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
S+ ++RVW ++ TF ++T Y +L +L + I + + EWES + D R+
Sbjct: 135 SDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIP 194
Query: 357 DVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA 416
+ I+ Y++ M E+A ++ ++ + + + E F+ YL ++D L ++ A
Sbjct: 195 NTILAFYIKNGMMEKAEGFLDHIVQKGVKPS--YSTWELFVWGYLSDGRMDKVLECLKKA 252
Query: 417 LSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAA 476
LS ++ W P + EE+ D++ AE+ + + + Y+ +++TY A
Sbjct: 253 LSCLEK--WDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTTEIYNSVLRTYAKA 310
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 13/267 (4%)
Query: 72 KTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA 129
K +R +++ Y V L GR+ A ++ M RK+ + ++ LD K +
Sbjct: 219 KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLE 278
Query: 130 AEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A++ F + + + TY +L+N C + A +F+ M + V++N L
Sbjct: 279 AKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLIN 338
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
+ + + E L +M QR + + +TY +Q + + D+D + F +M +
Sbjct: 339 GFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP 398
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV 306
W TY+ L L EKA + + +++ + D Y +I C T V
Sbjct: 399 DIW-TYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGK---VEDA 454
Query: 307 WGILKS----TFPPTNTSYLVLLQALA 329
WG+ S P +Y ++ L
Sbjct: 455 WGLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 101/241 (41%), Gaps = 5/241 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y +R T G+L+N +C+ A++L +KM E+ + + VA+N + + +
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDAL 210
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
++ ++ I + +TY + + + R+ +M + TYS L
Sbjct: 211 DFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKR-KITPNVITYSALLDA 269
Query: 260 YVK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL--KSTFPP 316
+VK ++ E E+ + + D Y LI+ C +D N+++ ++ K FP
Sbjct: 270 FVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPD 329
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY L+ K ++ + F + R + + +I+ + Q ++A F
Sbjct: 330 V-VSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFF 388
Query: 377 N 377
+
Sbjct: 389 S 389
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 130/343 (37%), Gaps = 55/343 (16%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG-QPEKVR--PL 201
YT+ ++NC+C AL++ KM L+LG +P++V L
Sbjct: 121 YTFNIVINCFCCCFQVSLALSVLGKM-------------------LKLGYEPDRVTIGSL 161
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
VN +RN D ++ + M + DI + +C T N A +
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK--------TRRVNDALDFF 213
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTS 320
K E+ K ++P + Y L++ CN+ DA + ++K P +
Sbjct: 214 K-EIGRKG---------IRP-NVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y LL A K + K+ FEE D+ +I D +EA +F+
Sbjct: 263 YSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 381 KRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPM---QVTVDTFFR 437
+ S + + + +++++ E + ++ R + VT +T +
Sbjct: 323 SKGCFPD--VVSYNTLINGFCKAKRV-------EDGMKLFRKMSQRGLVNNTVTYNTLIQ 373
Query: 438 FFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
F + DVD A+EF + S D Y++L+ G L
Sbjct: 374 GFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLL 416
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 123/290 (42%), Gaps = 7/290 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ +L ++H ++ M + K+ + F+ +D K + A + + +
Sbjct: 250 IHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 309
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY AL++ +C + A+ +F+ M F + V+++ L Y ++ + EK
Sbjct: 310 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 369
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M ++ + + +TY M H+ + +F+EM + + +Y L
Sbjct: 370 LFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP-DFVSYCILLDYL 428
Query: 261 VKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPT 317
K ++A LK +E M P D + Y +I C L+A ++ L S P
Sbjct: 429 CKNRRLDEAIALLKAIEGSNMDP-DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 487
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
+Y +++ L + + + F E + + S + ++I R +L+ +
Sbjct: 488 VWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNN 537
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 134/326 (41%), Gaps = 17/326 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G+ + +++ Y + L K G A+ ++ ME + +D K
Sbjct: 164 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 223
Query: 127 IAAAEKYFNGLSE-----YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ A FN SE + + +TY +L++ C + AL +M K + N V
Sbjct: 224 VTQA---FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVI 280
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
F+ + + G+ + +V+ M +R + + +TY M + +++D +VF M
Sbjct: 281 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMV 340
Query: 242 NECED-KCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTS 298
C+ +YS L + Y K + EKA +++ +E+ P + Y L+ C+
Sbjct: 341 --CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIP-NTVTYSTLMHGLCHVG 397
Query: 299 NL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
L DA+ ++ P SY +LL L K +D + E D+++
Sbjct: 398 RLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYT 457
Query: 358 VIIRAYLQKDMYEEAALIFNNAKKRA 383
++I + E A +F+N +
Sbjct: 458 IVIDGMCRAGELEAARDLFSNLSSKG 483
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 8/171 (4%)
Query: 77 DMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
D + YC+ L K R A+ +++ +E M + + +D + + AA F
Sbjct: 417 DFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 476
Query: 135 NGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
+ LS N +TY ++N C++ + A LF +M + N +N ++ +LR
Sbjct: 477 SNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN 536
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+ + L+ +M R S D T V ++ S DG+++ ++ +E
Sbjct: 537 NETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD----DGLDQSVKQILSE 583
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 38/255 (14%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+TY A+++ Y + +A LF++++ F + V +N+L + R G EKVR + +
Sbjct: 357 WTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEE 416
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNECEDKCRWT----------- 251
M +R D +TY + Y D +++ +M D +T
Sbjct: 417 MVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASK 476
Query: 252 ---------------------TYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYH 288
TYS L Y KA E+AE + +KP DR AY
Sbjct: 477 VEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKP-DRLAYS 535
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
++ + + + A+ +++ F P N Y V++ AL + N D++ + + E
Sbjct: 536 VMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEEL 595
Query: 348 CSSYDMRLADVIIRA 362
++ V+++
Sbjct: 596 SGMNPQVISSVLVKG 610
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 156/397 (39%), Gaps = 56/397 (14%)
Query: 66 AYIMEGKTVRKDMLEYCVRSLRKFGR--YRHALEVIEWMESRKMHFSYTDF-AVYLDLTA 122
A ++E + V+ ++C ++ G+ ++ ALE+ E + R + A L +
Sbjct: 168 AGVLEERRVQMTPTDFCF-VVKWVGQQNWQRALELYECLNLRHWYAPNARMVATILGVLG 226
Query: 123 KTNGIA-AAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
K N A A E + S Y A++ Y + + L + M E + + V+
Sbjct: 227 KANQEALAVEIFARAESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVS 286
Query: 182 FNNLSTMYLRLG--QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
FN L ++ G +P L+N++++ I D +TY + + S ++++ VF +
Sbjct: 287 FNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSD 346
Query: 240 M-CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL---------------------- 276
M + C+ W TY+ + S+Y + KAE K+L
Sbjct: 347 MESHRCQPDL-W-TYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSRE 404
Query: 277 ----------EEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTF-PPTNTSY 321
EEM R D Y+ +I +Y D +++ +KS+ P +Y
Sbjct: 405 GNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTY 464
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
VL+ +L K + ++ E + +I AY + EEA FN ++
Sbjct: 465 TVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRR 524
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAALS 418
R S + ++LR NEM+ A+
Sbjct: 525 SGIKPDRLAYS--VMLDFFLR-------FNEMKKAMG 552
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 56/310 (18%), Positives = 126/310 (40%), Gaps = 11/310 (3%)
Query: 64 LNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAK 123
N + +G + D + +++L R VI+ ++ + S + + L+ A+
Sbjct: 832 FNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQ 891
Query: 124 TNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ +K +NG+ + Y + Y +L CK + +M+E F +
Sbjct: 892 AGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQI 951
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
N++ +YL + + + + +++ ++ D TY + Y D + +
Sbjct: 952 CNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCR----DRRPEEGFSLM 1007
Query: 242 NECED---KCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNT 297
N+ + + TY +L + + K ++E+AE ++L + DR YH ++ Y +
Sbjct: 1008 NKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTS 1067
Query: 298 SNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
+ + I+K S PT ++ +L+ + K + + + + D
Sbjct: 1068 GDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPY 1127
Query: 357 DVIIRAYLQK 366
+I AYL+K
Sbjct: 1128 SSVIDAYLKK 1137
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 10/260 (3%)
Query: 58 GSVTGALNAY-IMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G V AL+ + ME +R D++ Y V L GR+R A ++ M RK+ F
Sbjct: 190 GHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITF 249
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
+D K + A++ +N + + A N +TY +L+N C E + A +F M+
Sbjct: 250 NALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMET 309
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ VA+ +L + + + E + +M Q+ ++ + +TY +Q + + +
Sbjct: 310 KGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNV 369
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYH 288
+ VF M + TY+ L KA + + +++ + P + + Y+
Sbjct: 370 AQEVFGHMVSRGVPP-NIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYN 428
Query: 289 FLISLYCNTSNLDAVNRVWG 308
L+ C L+ V+G
Sbjct: 429 VLLHGLCYNGKLEKALMVFG 448
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 9/292 (3%)
Query: 91 RYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAKNRYTY 147
++ AL++ M ESR + S DF L++ AK L + + YT
Sbjct: 51 QFNEALDLFSHMVESRPLP-SIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTC 109
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L+NC+C+ A + K+ +L F + F +L + + E+ +VNQM +
Sbjct: 110 NLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVE 169
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
I D + Y + S +D +F +M N + Y++L + + +
Sbjct: 170 MGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENY-GIRPDVVMYTSLVNGLCNSGRWR 228
Query: 268 KAELALKKL--EEMKPRDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYLVL 324
A+L L+ + ++KP D ++ LI + LDA +++ + P +Y L
Sbjct: 229 DADLLLRGMMKRKIKP-DVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL 287
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ L +D +Q F E++ D+ +I + + E+A IF
Sbjct: 288 INGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIF 339
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 100/238 (42%), Gaps = 3/238 (1%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +++ CK + AL+LF +M+ + V + +L G+ L+ M
Sbjct: 179 YTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMM 238
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
+R I D +T+ + ++ + + ++ EM +T S + + ++ L
Sbjct: 239 KRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLD 298
Query: 267 EKAELA-LKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVL 324
E ++ L + + P D AY LI+ +C + DA+ + + + +Y L
Sbjct: 299 EARQMFYLMETKGCFP-DVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTL 357
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
+Q + ++ ++ F SR ++R +V++ +A +IF + +KR
Sbjct: 358 IQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKR 415
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 124/309 (40%), Gaps = 42/309 (13%)
Query: 62 GALNAYIMEGKTVRKDML--EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTD---FAV 116
GA+ A I E + ML E + +R+F R + +E ++ + D F
Sbjct: 181 GAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGC 240
Query: 117 YLDLTAKTNGIAAAEKYFNGLS-EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
LD K + A F + + N + +LL +C+E A + ++ E F
Sbjct: 241 LLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGF 300
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ V +NNL Y + G+ L+ +MK+ N + ++ + +QS+ +D R
Sbjct: 301 EPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMR 360
Query: 236 VFYEM-CNECEDK-----------CRWTTY-----------------SNLA--SIYVKAE 264
+F EM + CE C+W S L+ I + E
Sbjct: 361 IFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHE 420
Query: 265 LFEKAELALKKLEEMKP----RDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNT 319
E+ E ++ +EEM+ D Y+ +I L C +L R+WG +++ P
Sbjct: 421 KKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLD 480
Query: 320 SYLVLLQAL 328
+Y++++
Sbjct: 481 TYILMVHGF 489
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 126/332 (37%), Gaps = 39/332 (11%)
Query: 76 KDMLEYCVRS--LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKY 133
KD L RS L++ + ALE+ EW M Y ++ ++ T G A +
Sbjct: 148 KDKLNNKERSIILKEQTSWERALEIFEWF---NMAGCYEVNVIHYNIVLGTLGKAQKWRL 204
Query: 134 FNGL-SEYAKN-----RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
L E K TYG L++ Y K E AL E+M+E + V +
Sbjct: 205 VESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQ 264
Query: 188 MYLRLGQPEKVRPL------VNQMK-------------------QRNISLDNLTYIVWMQ 222
+Y + G+ +K N MK ++SL TY +
Sbjct: 265 LYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESSLHPPHVSLSTYTYNTLID 324
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-P 281
+Y + F M E T++ + I ++ ++K+EE++ P
Sbjct: 325 TYGKAGQLKEASTTFENMLKEGVSPTT-VTFNTMIHICGNHGQLKEVTFLMQKMEELQCP 383
Query: 282 RDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
D + Y+ LISLY N+D A N + ++ P SY LL A + + + ++
Sbjct: 384 PDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKL 443
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
E + R D + R Y+ M EE+
Sbjct: 444 ITEMDERGLEIDEFTQSALTRMYIDAGMLEES 475
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 44 DKLYKRLSALG---------------ATGGSVTGALNAYI-------MEGKTVRKDMLEY 81
DKLY+ + G A GSV A+N Y+ + G TV + L
Sbjct: 614 DKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAIN-YVNAMKRDGLSGNTVIYNSL-- 670
Query: 82 CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA 141
++ K G + A E + +E + +DL ++ + + AE+ F L +
Sbjct: 671 -IKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKG 729
Query: 142 K-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N +T+ +L Y K + A+ + +M E L + ++FNN+ ++Y G+ ++
Sbjct: 730 EANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVS 789
Query: 201 LVNQMKQRNISLDNLTY 217
+ +M + + D TY
Sbjct: 790 IFQEMMKAAVQPDECTY 806
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 113/287 (39%), Gaps = 30/287 (10%)
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKM 170
+F V + A A+K F+ + ++ +Y +L+ M ALA +KM
Sbjct: 526 EFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKM 585
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
+ + + ++ + + + +LG E L +M + + D + Y V + +++ D
Sbjct: 586 QSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFA---DA 642
Query: 231 DGVERVFYEMCNECEDKCRWTT--YSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYH 288
V+ + D T Y++L +Y K ++A A K LE+ D A +
Sbjct: 643 GSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTD--DGPAIY 700
Query: 289 F---LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
+I LY S + ++ LK ++ ++L K+ I E
Sbjct: 701 SSNCMIDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLCMYKKIGRIQ---------E 751
Query: 346 SRCSSYDMR----LADVI-----IRAYLQKDMYEEAALIFNNAKKRA 383
+ C + M+ L+D++ I Y ++EA IF K A
Sbjct: 752 AICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAA 798
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 16/257 (6%)
Query: 135 NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
NGL N TY ++ +CKE M + A+ F M + N + +L + G
Sbjct: 155 NGLK---PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 211
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ LV ++ Q I L+ +TY + + E VF M N TY+
Sbjct: 212 LAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP-NQETYT 270
Query: 255 NLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
L ++KA+ E A+ LK+++E +KP D Y ++ CN S L+ + G +K
Sbjct: 271 ALVHGFIKAKEMEYAKDILKEMKEKCIKP-DLLLYGTILWGLCNESRLEEAKLLIGEIKE 329
Query: 313 TFPPTNTS-YLVLLQALAK----LNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
+ TN Y L+ A K A+ +L++ + + C + +A + L K
Sbjct: 330 SGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKG 389
Query: 368 MYEE----AALIFNNAK 380
M + ALI N K
Sbjct: 390 MMPDKIAYTALIDGNMK 406
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 138/344 (40%), Gaps = 15/344 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
+ L K GR + + + M + + S + + +D K + A F + E +
Sbjct: 28 LHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGF 87
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY +L++ + K + + + +FE+M + + + +N L + + + K
Sbjct: 88 TPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFE 147
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+++MK + + +TY ++ ++ + + F +M +T Y++L
Sbjct: 148 FLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT-YTSLIDAN 206
Query: 261 VKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVW-GILKSTFP 315
KA +A LK +EE+ K Y L+ C + V+ +L +
Sbjct: 207 CKAGNLAEA---LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 263
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P +Y L+ K ++ K +E + +C D+ L I+ + EEA L+
Sbjct: 264 PNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLL 323
Query: 376 FNNAKKRA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALS 418
K+ N +A + + M Y +S Q AL +E L
Sbjct: 324 IGEIKESGINTNAVIYT---TLMDAYFKSGQATEALTLLEEMLD 364
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 7/300 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL---SE 139
+R + + G+ A + + M R + + F + K + + +A GL +
Sbjct: 251 MRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANA-LRGLMAKAG 309
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
A + YTYGA + CK + A+ +FE+M E NTV F L + + G
Sbjct: 310 VAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGL 369
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L +M R I D + Y + D+ + EM N K TY+ L
Sbjct: 370 ELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGL-KPDKVTYTTLIDG 428
Query: 260 YVK-AELFEKAELALKKLEEMKPRDRKAYHFLIS-LYCNTSNLDAVNRVWGILKSTFPPT 317
+ K EL E+ + +E D Y LIS L + ++D+ + ++++ P
Sbjct: 429 FCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPD 488
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
NT+Y +++ A K + + + +E +++ + +V++ + + A ++ N
Sbjct: 489 NTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLN 548
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 97 EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCY 154
E++ ME + ++ T + + ++ ++++ I AEK F+ + + + Y Y +++N
Sbjct: 248 EILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 307
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
CK +RA LF++M E + + N + L + G+ + +VN M+ + + ++
Sbjct: 308 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNR 367
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
+ + M Y ID R+ M + + +T + +AS + ++ E+A+ L
Sbjct: 368 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTC-NIIASGFCRSNRREEAKRLLL 426
Query: 275 KLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKL 331
+EE + P + ++ LI +YC N R++ ++ K P+ +Y ++ K
Sbjct: 427 TMEERGVAP-NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKK 485
Query: 332 NAIDILKQCFEEWESR 347
++ + E + R
Sbjct: 486 GKMEEAYKLINEMQER 501
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYG 148
R A ++ ME R + + F++ +D+ K A A + F + + K + TY
Sbjct: 417 RREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYN 476
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
A + YCK+ E A L +M E + +T + +L G ++ L N+M Q
Sbjct: 477 AFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL 536
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
++ + +TY V + S D +++ EM E S +AS++ L
Sbjct: 537 GLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSG 596
Query: 269 AELALKKLE 277
E + ++E
Sbjct: 597 LENVVDRIE 605
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 3/243 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N YTYGAL+N CK + A + M N V FN L Y + G ++ L
Sbjct: 331 NAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQ 390
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
N M+Q+ +D T + + N + +R+ M E ++S L IY K
Sbjct: 391 NIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM-EERGVAPNVVSFSILIDIYCK 449
Query: 263 AELFEKAELALKKLEEM-KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTS 320
+ F +A K +E+ K Y+ I YC ++ ++ ++ P +
Sbjct: 450 EQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYT 509
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y L+ +D + F E + ++ VII + +EA +++
Sbjct: 510 YTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMN 569
Query: 381 KRA 383
K
Sbjct: 570 KEG 572
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 126/332 (37%), Gaps = 39/332 (11%)
Query: 76 KDMLEYCVRS--LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKY 133
KD L RS L++ + ALE+ EW M Y ++ ++ T G A +
Sbjct: 149 KDKLNNKERSIILKEQTSWERALEIFEWF---NMAGCYEVNVIHYNIVLGTLGKAQKWRL 205
Query: 134 FNGL-SEYAKN-----RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
L E K TYG L++ Y K E AL E+M+E + V +
Sbjct: 206 VESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQ 265
Query: 188 MYLRLGQPEKVRPL------VNQMK-------------------QRNISLDNLTYIVWMQ 222
+Y + G+ +K N MK ++SL TY +
Sbjct: 266 LYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESSLHPPHVSLSTYTYNTLID 325
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-P 281
+Y + F M E T++ + I ++ ++K+EE++ P
Sbjct: 326 TYGKAGQLKEASTTFENMLKEGVSPTT-VTFNTMIHICGNHGQLKEVTFLMQKMEELQCP 384
Query: 282 RDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
D + Y+ LISLY N+D A N + ++ P SY LL A + + + ++
Sbjct: 385 PDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKL 444
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
E + R D + R Y+ M EE+
Sbjct: 445 ITEMDERGLEIDEFTQSALTRMYIDAGMLEES 476
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 44 DKLYKRLSALG---------------ATGGSVTGALNAYI-------MEGKTVRKDMLEY 81
DKLY+ + G A GSV A+N Y+ + G TV + L
Sbjct: 615 DKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAIN-YVNAMKRDGLSGNTVIYNSL-- 671
Query: 82 CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA 141
++ K G + A E + +E + +DL ++ + + AE+ F L +
Sbjct: 672 -IKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKG 730
Query: 142 K-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N +T+ +L Y K + A+ + +M E L + ++FNN+ ++Y G+ ++
Sbjct: 731 EANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVS 790
Query: 201 LVNQMKQRNISLDNLTY 217
+ +M + + D TY
Sbjct: 791 IFQEMMKAAVQPDECTY 807
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 113/287 (39%), Gaps = 30/287 (10%)
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKM 170
+F V + A A+K F+ + ++ +Y +L+ M ALA +KM
Sbjct: 527 EFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKM 586
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
+ + + ++ + + + +LG E L +M + + D + Y V + +++ D
Sbjct: 587 QSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFA---DA 643
Query: 231 DGVERVFYEMCNECEDKCRWTT--YSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYH 288
V+ + D T Y++L +Y K ++A A K LE+ D A +
Sbjct: 644 GSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTD--DGPAIY 701
Query: 289 F---LISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
+I LY S + ++ LK ++ ++L K+ I E
Sbjct: 702 SSNCMIDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLCMYKKIGRIQ---------E 752
Query: 346 SRCSSYDMR----LADVI-----IRAYLQKDMYEEAALIFNNAKKRA 383
+ C + M+ L+D++ I Y ++EA IF K A
Sbjct: 753 AICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAA 799
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 97 EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCY 154
E++ ME + ++ T + + ++ ++++ I AEK F+ + + + Y Y +++N
Sbjct: 244 EILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 303
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
CK +RA LF++M E + + N + L + G+ + +VN M+ + + ++
Sbjct: 304 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNR 363
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
+ + M Y ID R+ M + + +T + +AS + ++ E+A+ L
Sbjct: 364 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTC-NIIASGFCRSNRREEAKRLLL 422
Query: 275 KLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKL 331
+EE + P + ++ LI +YC N R++ ++ K P+ +Y ++ K
Sbjct: 423 TMEERGVAP-NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKK 481
Query: 332 NAIDILKQCFEEWESR 347
++ + E + R
Sbjct: 482 GKMEEAYKLINEMQER 497
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYG 148
R A ++ ME R + + F++ +D+ K A A + F + + K + TY
Sbjct: 413 RREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYN 472
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
A + YCK+ E A L +M E + +T + +L G ++ L N+M Q
Sbjct: 473 AFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL 532
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
++ + +TY V + S D +++ EM E S +AS++ L
Sbjct: 533 GLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSG 592
Query: 269 AELALKKLE 277
E + ++E
Sbjct: 593 LENVVDRIE 601
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 3/243 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N YTYGAL+N CK + A + M N V FN L Y + G ++ L
Sbjct: 327 NAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQ 386
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
N M+Q+ +D T + + N + +R+ M E ++S L IY K
Sbjct: 387 NIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM-EERGVAPNVVSFSILIDIYCK 445
Query: 263 AELFEKAELALKKLEEM-KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTS 320
+ F +A K +E+ K Y+ I YC ++ ++ ++ P +
Sbjct: 446 EQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYT 505
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y L+ +D + F E + ++ VII + +EA +++
Sbjct: 506 YTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMN 565
Query: 381 KRA 383
K
Sbjct: 566 KEG 568
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 130/314 (41%), Gaps = 15/314 (4%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
++GK V+ +++ Y + S+ K A ++ M S+ + + +
Sbjct: 203 VDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGK 262
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A FN + N YT+ L++ +CKE + A + M + + +N+
Sbjct: 263 MKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNS 322
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNE 243
L Y + + K + + N + QR ++ + +Y + + + + +D +F EM CN
Sbjct: 323 LMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNN 382
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSN 299
TY++L K K ALK ++EM P D+ Y+ ++ C
Sbjct: 383 IIPD--VVTYNSLIDGLCK---LGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQ 437
Query: 300 LD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
+D A+ + + P +Y L+ L K ++ + FE+ + D+ +
Sbjct: 438 VDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTA 497
Query: 359 IIRAYLQKDMYEEA 372
+I+ + +++E+
Sbjct: 498 MIQGFCSHGLFDES 511
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 5/206 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N+ +YG L+N CK T AL L ++D N V +N + ++ + L
Sbjct: 176 NKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 235
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++M + IS D +TY + + + + +F +M E + + T++ L + K
Sbjct: 236 SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVY-TFNILVDGFCK 294
Query: 263 AELFEKAE--LALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
++A+ LA+ + +KP D Y+ L+ YC ++ ++ I + P
Sbjct: 295 ERRLKEAKNVLAMMMKQGIKP-DVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIH 353
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWE 345
SY +++ K+ +D F+E
Sbjct: 354 SYSIMIHGFCKIKKVDEAMNLFKEMH 379
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 129/316 (40%), Gaps = 10/316 (3%)
Query: 60 VTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
VT A N + M K + +++ Y + L K ++H ++ M K+
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+D K +A A + + N TY AL++ +C + A+ +F+ M
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ N +++N L Y ++ +K L +M ++ ++ + +TY + H+ +
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISL 293
+F+EM + TY L+ K +KA LK +E D + Y ++
Sbjct: 406 SLFHEMVARGQIP-DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464
Query: 294 YCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSY 351
C L+ ++ L S P +Y +++ L K + + F E ++ CS
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524
Query: 352 DMRLADVIIRAYLQKD 367
D ++I R +L+ +
Sbjct: 525 DCTY-NLITRGFLRNN 539
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 112/289 (38%), Gaps = 7/289 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N TYG L+N CK T A+ L M++ N V F+ L + Q +
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+ ++M + IS + +TY + L + V + EM + +T + + ++
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Query: 260 YVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT 319
+ + E ++ + + Y+ L+ +C + +D +V+ + N
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350
Query: 320 -SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
SY L+ K+ ++D FEE + + + + +I ++A +F+
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410
Query: 379 AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRP 427
R + + Y ++R LD A+ A L + +W P
Sbjct: 411 MVARGQIPD--LVTYRTLSDYLCKNRHLDKAM----ALLKAIEGSNWDP 453
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 129/316 (40%), Gaps = 10/316 (3%)
Query: 60 VTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
VT A N + M K + +++ Y + L K ++H ++ M K+
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285
Query: 117 YLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+D K +A A + + N TY AL++ +C + A+ +F+ M
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ N +++N L Y ++ +K L +M ++ ++ + +TY + H+ +
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISL 293
+F+EM + TY L+ K +KA LK +E D + Y ++
Sbjct: 406 SLFHEMVARGQIP-DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464
Query: 294 YCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSY 351
C L+ ++ L S P +Y +++ L K + + F E ++ CS
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524
Query: 352 DMRLADVIIRAYLQKD 367
D ++I R +L+ +
Sbjct: 525 DCTY-NLITRGFLRNN 539
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 112/289 (38%), Gaps = 7/289 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N TYG L+N CK T A+ L M++ N V F+ L + Q +
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+ ++M + IS + +TY + L + V + EM + +T + + ++
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Query: 260 YVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT 319
+ + E ++ + + Y+ L+ +C + +D +V+ + N
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350
Query: 320 -SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
SY L+ K+ ++D FEE + + + + +I ++A +F+
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410
Query: 379 AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRP 427
R + + Y ++R LD A+ A L + +W P
Sbjct: 411 MVARGQIPD--LVTYRTLSDYLCKNRHLDKAM----ALLKAIEGSNWDP 453
>gi|326492636|dbj|BAJ90174.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 631
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 12/243 (4%)
Query: 73 TVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA 130
TVR ++ Y V++ R A V+ M +R + + AK + A
Sbjct: 212 TVRPNLTTYNILVKAWCDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRA 271
Query: 131 EKYFNGLSEYAKNRY-----TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
E+ + E + R T+G ++ YC+E E AL +M + L N + FN L
Sbjct: 272 EEL---VVEMVRARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTL 328
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECE 245
+L ++ M+ I D +TY + ++S L + +VF +M E
Sbjct: 329 LKGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMV-EAG 387
Query: 246 DKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR-KAYHFLISLYCNTSNLDAVN 304
+ YS LA +V+A+ KAE L+++ + R + +IS +C+ +++D
Sbjct: 388 IEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNAT 447
Query: 305 RVW 307
RV+
Sbjct: 448 RVY 450
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LN + + +F+KM E + ++ L+ ++R QP K L+ +M
Sbjct: 359 TYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHVRAQQPGKAEELLERM 418
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + + +T+ + + + D+D RV+ +M + + T+ L Y + +
Sbjct: 419 CRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKM-RDAGVRPNLRTFETLIWGYSEQKQ 477
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLIS 292
KAE L+ ++E R +++ + L++
Sbjct: 478 PWKAEEVLQMMQEAGIRPKQSTYSLVA 504
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 141/377 (37%), Gaps = 50/377 (13%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A + +TY L++ CK T++A + +M + +TV FN++ + G+ E+
Sbjct: 7 APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHS 66
Query: 201 LVNQMKQRNISLDNLTY----------------------------IVWMQSYSHLND--- 229
L+ M +RN TY + + +YS L D
Sbjct: 67 LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLC 126
Query: 230 ----IDGVERVFYEMC-NECEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRD 283
ID + EM N C TY+ L KA EKA EL + D
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPN--LVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184
Query: 284 RKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
Y ++ C LD A+ V G+LK P+ +Y L++ L + +D F+
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLR 402
E S+ + D ++ Y + +EA + + + + + M Y +
Sbjct: 245 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR-----GTPYIDVYNALMDGYCK 299
Query: 403 SRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL- 461
+LD N E + + + +D + + VD A F + + S C+
Sbjct: 300 EGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK----VDEAFPFLESMHSAGCVP 355
Query: 462 DFSAYSLLIKTYIAAGK 478
D +Y+++I A K
Sbjct: 356 DVVSYNIIIDGLFKASK 372
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 4/236 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY L++ CK TE+A L E + F+ + V + + + G+ +K +V
Sbjct: 149 NLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 208
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M +R + +TY M+ +D +F EM ++ + Y +L + Y K
Sbjct: 209 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK-DCTADALAYVSLVNGYCK 267
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSY 321
+ ++A+ + + D Y+ L+ YC LD + V+ + P +Y
Sbjct: 268 SSRTKEAQKVVDGIRGTPYID--VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTY 325
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+++ L K +D E S D+ ++II + +EA + +
Sbjct: 326 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 381
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 8/254 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
V L K GR AL+++E M R S + ++ +T + A F + +
Sbjct: 192 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y +L+N YCK T+ A + + + ++ +N L Y + G+ +++
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYID---VYNALMDGYCKEGRLDEIPN 308
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ M R + TY + M +D F E + +Y+ +
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA-FPFLESMHSAGCVPDVVSYNIIIDGL 367
Query: 261 VKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTN 318
KA ++A L ++ + P D Y+ L++ +C D AV + ++K+ P N
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDN 427
Query: 319 TSYLVLLQALAKLN 332
+Y L+ L++ N
Sbjct: 428 VTYNTLISGLSQTN 441
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 106/295 (35%), Gaps = 14/295 (4%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAK 142
L K G++ A ++ M R S + + K + A+ + S +
Sbjct: 54 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVP 113
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ TY L + CK + A L ++M N V +N L + + EK L+
Sbjct: 114 DVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELL 173
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDG----VERVFYEMCNECEDKCRWTTYSNLAS 258
+ D +TY + + +D VE + C TY+ L
Sbjct: 174 ETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP-----SVITYTALME 228
Query: 259 IYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT 317
+ ++A K++ D AY L++ YC +S +V ++ T P
Sbjct: 229 GLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT--PY 286
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
Y L+ K +D + FE+ R +++ ++++ + +EA
Sbjct: 287 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 341
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 121/308 (39%), Gaps = 45/308 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ +CK + A+ L +M E+ T + L ++ + L +M
Sbjct: 199 TYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEM 258
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY--SNLASIYVKA 263
+ + D TY ++ ID F EM E CR T +N+ + KA
Sbjct: 259 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQRE---GCRPDTVFMNNMINFLGKA 315
Query: 264 -------ELFEKAE------------LALKKLEEMKPRDRKA------------------ 286
+LF++ E +K L E K R +
Sbjct: 316 GRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 375
Query: 287 YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
Y LI +C T+ ++ A+ + + + FPP +Y L+ AL K D+ + F+E +
Sbjct: 376 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 435
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQ 405
C S R+ V+I+ + ++A +F+ K A + + + M R+
Sbjct: 436 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVY--AYNALMSGLARTGM 493
Query: 406 LDLALNEM 413
LD AL+ M
Sbjct: 494 LDEALSTM 501
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 81 YC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS 138
YC + +L K RY A E+ + ++ S +AV + K + A F+ ++
Sbjct: 411 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMN 470
Query: 139 EY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+ A + Y Y AL++ + M + AL+ +M E + + ++N + + G P
Sbjct: 471 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 530
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+ +++ MKQ + D ++Y + + SH + ++ EM
Sbjct: 531 RAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 574
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 122/287 (42%), Gaps = 6/287 (2%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA-AEKYFNGLSE--YAK 142
L K GR A+++ + ME+ + S + + ++ A+ +F + E +
Sbjct: 312 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ +TY L++ +CK E+A+ L E+MDE F A+ +L + + + L
Sbjct: 372 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 431
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++K+ S Y V ++ +D +F EM N+ Y+ L S +
Sbjct: 432 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM-NKLGCAPDVYAYNALMSGLAR 490
Query: 263 AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTS 320
+ ++A +++++E D +Y+ +++ T A+ + + +ST P S
Sbjct: 491 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 550
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
Y +L AL+ + + +E + YD+ I+ A + D
Sbjct: 551 YNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVD 597
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 133/330 (40%), Gaps = 20/330 (6%)
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL-DNLTY 217
M +A+ +F ++ K A+N++ M + GQ EKV L N+M D +TY
Sbjct: 141 MVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTY 200
Query: 218 IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE 277
+ ++ L D ++ EM E + Y+ L +++ K F A AL E
Sbjct: 201 SALISAFCKLGRRDSAIQLLNEM-KEIGMQPTTKIYTMLIALFFK---FNDAHGALSLFE 256
Query: 278 EMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYL-VLLQALAKLN 332
EM+ + D Y LI +D + ++ +T ++ ++ L K
Sbjct: 257 EMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAG 316
Query: 333 AIDILKQCFEEWES-RCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK 391
+D + F+E E+ RC + +I + K E F K+ + + F
Sbjct: 317 RLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY 376
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
S + + ++ +++ A+ L E + + P + + K D A E
Sbjct: 377 S--ILIDGFCKTNRMEKAM----MLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 430
Query: 452 CKVLKSLNCLDFSA--YSLLIKTYIAAGKL 479
+ LK NC SA Y+++IK AG+L
Sbjct: 431 FQELKE-NCGSSSARVYAVMIKHLGKAGRL 459
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N + Y L++ YC+E A +F+KM ++ L + +N+L ++G+ E+
Sbjct: 466 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 525
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
QM++R + + TY + Y D++ E++ M + K Y +L Y K
Sbjct: 526 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL-KPNDVIYIDLLESYFK 584
Query: 263 AELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTS 320
++ EK K L++ D + Y LI ++ N++A RV GI K+ P
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 644
Query: 321 YLVLLQALAK 330
Y L+ L K
Sbjct: 645 YSSLISGLCK 654
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 76/188 (40%), Gaps = 15/188 (7%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALE-------------VIEWMESRKMHFSYTDFAVY 117
G + +L+ V GR+ ALE V+ M R + + V
Sbjct: 204 GHGSQHSVLQRAVEGSAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVL 263
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
+ ++ + A + + +Y + +TYGAL+N CK + A AL ++M +
Sbjct: 264 IAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL 323
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
N V + NL ++R G ++ ++ +M + + +TY ++ + +D
Sbjct: 324 KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 383
Query: 236 VFYEMCNE 243
+ +M +
Sbjct: 384 LLKQMVRD 391
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 123/301 (40%), Gaps = 11/301 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K G + ALE+ + M +R + ++ K AAA + E
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY L++ CK+ + AL +F M V++ +L + ++
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDI---DGVERVFYEMCNECEDKCRWTTYSNLA 257
++N+M NI D +T+ + + + ++ GV + EM E TY++L
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN----VITYNSLM 343
Query: 258 SIY-VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFP 315
Y ++ E+ E +L + D +Y LI+ YC +D +++ ++
Sbjct: 344 HGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLT 403
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P SY L+ A +L + ++ F++ + D+ V++ + ++ +A +
Sbjct: 404 PNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463
Query: 376 F 376
F
Sbjct: 464 F 464
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 97/229 (42%), Gaps = 3/229 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ L++ +CKE A + + M E+ N + +N+L Y + + R L + M
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK-AE 264
R D +Y + + Y + ID +++F EM ++ +Y+ L + + +
Sbjct: 363 ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTP-NTVSYTTLIHAFCQLGK 421
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF-PPTNTSYLV 323
L E EL D Y L+ +C L R++ ++ T+ P Y +
Sbjct: 422 LREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTI 481
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
L+ ++ K ++ ++ F E D+++ II ++ + +EA
Sbjct: 482 LIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEA 530
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 130/342 (38%), Gaps = 48/342 (14%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-- 140
V S + GR A E I+ M + F V +D K+ I A K+FNG+
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N TY L+N K E A +F +M E + +A+N L + G+ +
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413
Query: 201 LVNQMKQRNISLDNLTYIVWMQ----------------------------SYSHLNDI-- 230
L +MK R + + TY + + +Y+ L D+
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLG 473
Query: 231 -----DGVERVFYEMCNECEDKCRWTTYSNL---ASIYVKAELFEKAELALKKLEEMKPR 282
D V + EM E +C + SN +I E L K L E+
Sbjct: 474 KGGQMDKVLAIIKEMV-EKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEI--- 529
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCF 341
Y+ L+S + + ++D ++ ++K PT +Y L+ L K +D
Sbjct: 530 ---TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLL 586
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
E E + + ++ ++ ++D EE+ +F+ ++
Sbjct: 587 REMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG 628
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF-NGLSEY-AKN 143
L K G+ HAL + M ++ ++ +D K + A +F N +S+ N
Sbjct: 783 LGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPN 842
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
Y +L++ + K+ M +RAL LFE+M + N V +NNL + + G+ L+
Sbjct: 843 VGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLE 902
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+M++ D +TY + + + +D E F M
Sbjct: 903 EMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRM 939
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 133/340 (39%), Gaps = 46/340 (13%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K G A + + M+ R + + + + + + K A + F+ L E
Sbjct: 399 IDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGA 458
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDE---------------------------- 172
+ +TY L++ K ++ LA+ ++M E
Sbjct: 459 VPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEY 518
Query: 173 ----LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN 228
K LG + +N L + ++ G ++ L+ MK+ +TY +
Sbjct: 519 PSLGFKSLGE-ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAG 577
Query: 229 DIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----D 283
+D + EM + CE TYS+L + + K + + E +L +EM + D
Sbjct: 578 RLDEAVSLLREMEKQGCEPSV--VTYSSLMASFYKRD---QEEESLSLFDEMVRKGCVAD 632
Query: 284 RKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
Y +I+ C + ++D V+G +K P +Y LL +L K ID Q F
Sbjct: 633 VSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFN 692
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
E + D + ++++ ++ + +EA + ++ K +
Sbjct: 693 ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ 732
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 116/303 (38%), Gaps = 40/303 (13%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAK 142
SL K + AL++ ++ + + + ++ K+N + A K + +
Sbjct: 677 SLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILP 736
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ +TY +LL+ K E A +F KM E + VA+ +L + + G+ +
Sbjct: 737 DLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIF 796
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIY 260
M ++ D +TY + S L VE +Y N C YS+L +
Sbjct: 797 RAMAKKRCVPDVVTYSSLIDS---LGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSF 853
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS 320
K + ++A L+ EEM+ R C PP +
Sbjct: 854 GKKGMVDRA---LELFEEMQRRQ-----------C-------------------PPNIVT 880
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y LL LAK +++ ++ EE E D+ +++I + M +EA F K
Sbjct: 881 YNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMK 940
Query: 381 KRA 383
++
Sbjct: 941 EKG 943
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 131/311 (42%), Gaps = 17/311 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMH---FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
V L K R A ++++ M+++ + F+YT LD K+ + A F ++E
Sbjct: 710 VNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSL---LDGLGKSGRLEEAFNMFTKMTE 766
Query: 140 --YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
+ + Y +L++ K AL +F M + + + + V +++L + G+ E+
Sbjct: 767 EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEE 826
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-ECEDKCRWTTYSNL 256
+ + + Y + S+ +D +F EM +C TY+NL
Sbjct: 827 AYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNI--VTYNNL 884
Query: 257 ASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TF 314
S KA AE L+++E++ D Y+ LI +D + +K
Sbjct: 885 LSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGI 944
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQC--FEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P ++ L+++L K++ + L+ C F+ E + + +V+I + EA
Sbjct: 945 VPDVITFTSLIESLGKVDKL--LEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEA 1002
Query: 373 ALIFNNAKKRA 383
A+IF+ K +
Sbjct: 1003 AMIFHEMKVKG 1013
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
L K GR A +++E ME + + +D K + AE YF + E
Sbjct: 887 GLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVP 946
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ T+ +L+ K A LF+ M+E + + V +N L + R G+ + +
Sbjct: 947 DVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIF 1006
Query: 203 NQMKQRNISLDNLT 216
++MK + D +T
Sbjct: 1007 HEMKVKGCMPDGIT 1020
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 2/175 (1%)
Query: 68 IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
I +G T + + S K G ALE+ E M+ R+ + + L AK +
Sbjct: 835 ISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRL 894
Query: 128 AAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
AEK + + + TY L++ K M + A + F++M E + + + F +L
Sbjct: 895 NVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSL 954
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
++ + + L + M++ + +TY V + + +F+EM
Sbjct: 955 IESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEM 1009
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 129/327 (39%), Gaps = 46/327 (14%)
Query: 62 GALNAYIMEGKTVRKDML--EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTD---FAV 116
GA+ A I E + ML E + +R+F R + +E ++ + D F
Sbjct: 158 GAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGC 217
Query: 117 YLDLTAKTNGIAAAEKYFNGLS-EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
LD K + A F + + N + +LL +C+E A + ++ E F
Sbjct: 218 LLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGF 277
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ V +NNL Y + G+ L+ +MK+ N + ++ + +QS+ +D R
Sbjct: 278 EPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMR 337
Query: 236 VFYEM-CNECEDK-----------CRWT----TYSNLASIYVKA---------------E 264
+F EM + CE C+W Y L + K E
Sbjct: 338 IFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHE 397
Query: 265 LFEKAELALKKLEEMKP----RDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNT 319
E+ E ++ +EEM+ D Y+ +I L C +L R+WG +++ P
Sbjct: 398 KKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLD 457
Query: 320 SYLVLLQALAK----LNAIDILKQCFE 342
+Y++++ + A D K+ E
Sbjct: 458 TYILMVHGFLSQGCLVEACDYFKEMVE 484
>gi|297807403|ref|XP_002871585.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317422|gb|EFH47844.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 609
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 15/305 (4%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN--GLSEYAK 142
SL K GR ALEV+E M+ + + S +++ + A+ + EK F G + K
Sbjct: 257 SLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLK 316
Query: 143 NRYTYGALLNCYCKELMTERALALFEKM--DELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ ++ Y +E ER L + M ELK + + + ++ + G E ++
Sbjct: 317 DPEMCLKVVLMYVREGKMERTLEVVAAMIKAELK-VTDCILCAIVNGFCKQRGFAEAIKV 375
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
MKQ +TY + + +Y L D E +F EM + DKC YSN+ +Y
Sbjct: 376 YEWAMKQ-ECEAGQVTYAIAINAYCRLEQDDKAEMLFDEMVKKGFDKC-VVAYSNIMDMY 433
Query: 261 VKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVWGILK-STFP 315
K + A+K + +MK R K Y+ LI ++ +L ++W +K +
Sbjct: 434 GKTQRLSD---AVKLMAKMKQRGCKPNIWIYNSLIDMHGRAKDLRRAEKIWKEMKRAKVL 490
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P SY ++ A + ++ + ++E+ D +A +++ + + +E +
Sbjct: 491 PDKVSYTSMISAYNRAKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRL 550
Query: 376 FNNAK 380
+ K
Sbjct: 551 LQDMK 555
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 16/293 (5%)
Query: 71 GKTVRKDMLEYCVRSLRKF---GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
GK + KD E C++ + + G+ LEV+ M ++ + ++ K G
Sbjct: 311 GKKLLKDP-EMCLKVVLMYVREGKMERTLEVVAAMIKAELKVTDCILCAIVNGFCKQRGF 369
Query: 128 AAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
A A K + E + TY +N YC+ ++A LF++M + F VA++N+
Sbjct: 370 AEAIKVYEWAMKQECEAGQVTYAIAINAYCRLEQDDKAEMLFDEMVKKGFDKCVVAYSNI 429
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNE 243
MY + + L+ +MKQR + Y + + D+ E+++ EM
Sbjct: 430 MDMYGKTQRLSDAVKLMAKMKQRGCKPNIWIYNSLIDMHGRAKDLRRAEKIWKEMKRAKV 489
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDA 302
DK +Y+++ S Y +A+ E+ ++ + + DR ++ ++ TS +D
Sbjct: 490 LPDK---VSYTSMISAYNRAKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDE 546
Query: 303 VNRVWGILKSTFPPTNTS-YLVLLQAL--AKLNA-IDILKQCFEEWESRCSSY 351
+ R+ +K + Y L AL A LN+ I L++ F+ ++ S Y
Sbjct: 547 LMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDAAQTSASRY 599
>gi|357487221|ref|XP_003613898.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515233|gb|AES96856.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 807
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 27/257 (10%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL------------- 192
TYG L++ Y K E AL ++M + V + +Y R
Sbjct: 179 TYGTLIDVYSKSGFKEEALGWLQRMLSQGMEPDEVTMGVVVQLYKRAREFQKAEEFFRKW 238
Query: 193 --GQP---------EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
G+P VR + N++ N+ L++ TY + Y I V +F +M
Sbjct: 239 SRGEPLVIAIDHNTVDVRHVCNEVSHVNVCLNSHTYNTLIDIYGKAGQIQAVYEIFAKMI 298
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNL 300
+ T++ + +Y + L L+++EE++ P D + Y+ LIS+ +N+
Sbjct: 299 KQGVAPTT-VTFNTMIHLYGNHGRIREVSLLLQRMEELRCPPDTRTYNILISVLVKHNNI 357
Query: 301 DAVNRVWGILKSTF-PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
+ +K F P SY LL A + + ++ E + R D +
Sbjct: 358 KLAAKYLMKMKEAFLEPDLVSYRTLLYAYSTRKMVQEAEELVREMDERGLKIDEFTQAAL 417
Query: 360 IRAYLQKDMYEEAALIF 376
R Y++ +M E++ L F
Sbjct: 418 TRMYVESNMLEQSWLWF 434
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 91/218 (41%), Gaps = 7/218 (3%)
Query: 101 WMESRKMH----FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK-NRYTYGALLNCYC 155
W+ R+ H + + + +D + AEK F + K + + ++ Y
Sbjct: 431 WLWFRRFHVAGNITSSCYCANIDAYGEQGYTLEAEKVFMCCKQKKKLSVLVFNVMIKAYG 490
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
++A LF+ M++ + N ++++L + +P +P +N+M++ + D +
Sbjct: 491 IGKCYDKACQLFDSMEKFGIVANECSYSSLIHILASADKPHIAKPYLNKMQEAGLVSDCI 550
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
Y + S+ L+ +D E ++ EM K YS L + + KA L +
Sbjct: 551 LYCAVISSFVKLSQLDMAEELYIEMIGHTV-KPDAIIYSVLINAFADVGNVIKATGYLDR 609
Query: 276 LEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWGILKS 312
+ +A Y+ L+ LY L + + +L+S
Sbjct: 610 MRNAGFVGNQAIYNSLMKLYTKIGYLKEAQQTYTLLQS 647
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N +TY L++ Y K + +F KM + TV FN + +Y G+ +V L+
Sbjct: 270 NSHTYNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLL 329
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+M++ D TY + + N+I + +M E + +Y L Y
Sbjct: 330 QRMEELRCPPDTRTYNILISVLVKHNNIKLAAKYLMKM-KEAFLEPDLVSYRTLLYAYST 388
Query: 263 AELFEKAELALKKLEE 278
++ ++AE +++++E
Sbjct: 389 RKMVQEAEELVREMDE 404
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 9/265 (3%)
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I+ A KYF+ + + +Y +++C+ K ERAL + M E F N V FN
Sbjct: 201 ISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNT 260
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L YL+LG + + + + + D +T+ + H + +D F EM +E
Sbjct: 261 LINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEM-SEW 319
Query: 245 EDKCRWTTYSNLASIYVKAELFEKA-ELALK-KLEEMKPRDRKAYHFLISLYCNTSNLDA 302
+ TY+ L A KA EL K K++ + P D +++ I +C ++
Sbjct: 320 GVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITP-DAYSFNAPILSFCRMRKIEK 378
Query: 303 VNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES-RCSSYDMRLADVII 360
+++ + + P + +Y L++AL +D K+ ES C ++
Sbjct: 379 AQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWPVV 438
Query: 361 RAYLQKDMYEEAALIFNNAKKRANA 385
A + + EA + F N R NA
Sbjct: 439 GALTKMGRFSEAGM-FMNKLHRKNA 462
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 170/408 (41%), Gaps = 31/408 (7%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME +R +++ Y V R A+ V+E M+ + + S T+ A Y L
Sbjct: 36 MERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGV--SATE-ATYRSLVHGAFR 92
Query: 127 IAAAEKYFNGLSEYAKNRYT-----YGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
E+ + LSE+ ++ T Y LL C K M + A+ L +KM + +L +
Sbjct: 93 CLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTT 152
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
F+ + +++ + + LV+ ++ +L YI+ ++S+ DI + F +M
Sbjct: 153 FSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMV 212
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA-------YHFLISLY 294
++ S++ S + + F KA + LE +K ++ LI+ Y
Sbjct: 213 SD-------GLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGY 265
Query: 295 CNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
N+ DA + +++ P ++ L+ L + +D CF E ++
Sbjct: 266 LKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNV 325
Query: 354 RLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEM 413
+ +V+I +A + N K + S + ++ + R R+++ A
Sbjct: 326 QTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAY--SFNAPILSFCRMRKIEKA---- 379
Query: 414 EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+ ++ ++ P T + + +E+ VD A+E ++S++C+
Sbjct: 380 QKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCI 427
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 119/310 (38%), Gaps = 44/310 (14%)
Query: 80 EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
E V K G + +ALE M + S V +D + + A N +
Sbjct: 469 ESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQT 528
Query: 140 YA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N +TY A++N CKE +ERAL LF M + L + V ++ L + + +K
Sbjct: 529 QGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQK 588
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
L +M + ++ D + Y + + H
Sbjct: 589 ALMLYARMLKIGVTPDMVAYTILINILCH------------------------------- 617
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI----LKST 313
++ + E L K E D+ +Y +I+ +C ++ + W + L+
Sbjct: 618 ----RSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDM---RKAWALFNEMLQRG 670
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
PT +Y L+ K+N IDI +E + + + D+ +V+I A+ ++ ++A
Sbjct: 671 HLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKAL 730
Query: 374 LIFNNAKKRA 383
+ N K+
Sbjct: 731 EMLNEMKENG 740
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 116/298 (38%), Gaps = 46/298 (15%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGAL 150
R A E++E ME + ++ Y+ + + +A + L + N Y Y A+
Sbjct: 272 RQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAI 331
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
++ CK+ + AL + E+M + ++ L + + G EK L+ +MK N+
Sbjct: 332 IHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNM 391
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE 270
+ SYS L F+ +C + + +L + K
Sbjct: 392 EPS-------LVSYSSL---------FHGLCKKRLSDISLDIFRDLGAAGYKY------- 428
Query: 271 LALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALA 329
D+ AY LI +C +LD+ +++ ++++ P +++ L+
Sbjct: 429 ------------DQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFC 476
Query: 330 KL----NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
K+ NA++ E + +VII A+ ++ EEA + N + +
Sbjct: 477 KMGLWVNALEFFNMMLEGG----ILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L++ YCK + A L ++M + V +N L + R G +K ++N+M
Sbjct: 677 TYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEM 736
Query: 206 KQRNISLDNLTYIV--WM 221
K+ + D++TY++ W+
Sbjct: 737 KENGVLPDHMTYMMLEWL 754
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N + Y L++ YC+E A +F+KM ++ L + +N+L ++G+ E+
Sbjct: 488 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 547
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
QM++R + + TY + Y D++ E++ M + K Y +L Y K
Sbjct: 548 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL-KPNDVIYIDLLESYFK 606
Query: 263 AELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTS 320
++ EK K L++ D + Y LI ++ N++A RV GI K+ P
Sbjct: 607 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 666
Query: 321 YLVLLQALAK 330
Y L+ L K
Sbjct: 667 YSSLISGLCK 676
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 75/176 (42%), Gaps = 4/176 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G + D+ Y + + K + A +V+ M R + + V + ++
Sbjct: 235 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A + + +Y + +TYGAL+N CK + A AL ++M + N V + N
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
L ++R G ++ ++ +M + + +TY ++ + +D + +M
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 410
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 133/328 (40%), Gaps = 7/328 (2%)
Query: 67 YIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
Y M + + D+L Y + + G A ++ M R + F ++ K
Sbjct: 798 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKA 857
Query: 125 NGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
I A + N + + + N TY L++ CKE + A L +M ++ N +
Sbjct: 858 GHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 917
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N++ + G E+ LV + + ++ D +TY M +Y ++D + + EM
Sbjct: 918 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLG 977
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALK-KLEEMKPRDRKAYHFLISLYCNTSNLD 301
+ T++ L + + + E E L L + + ++ L+ YC +NL
Sbjct: 978 KGLQPTI-VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLK 1036
Query: 302 AVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
A ++ + S P +Y L++ + F+E + + S + V+I
Sbjct: 1037 AATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1096
Query: 361 RAYLQKDMYEEAALIFNNAKKRANASAR 388
+ + ++ + EA IF+ ++ A+ +
Sbjct: 1097 KGFFKRKKFVEAREIFDQMRRDGLAADK 1124
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 5/237 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N YTYG+++ C+ A F +M L +T+ + L + + G
Sbjct: 738 NSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFF 797
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASIYV 261
+M R+I+ D LTY + + + D+ ++F+EM C E T++ L + Y
Sbjct: 798 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDI--ITFTELMNGYC 855
Query: 262 KAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
KA + A + ++ + Y LI C +LD+ N + + K P
Sbjct: 856 KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 915
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y ++ L K I+ + E+E+ + D ++ AY + ++A I
Sbjct: 916 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 119/306 (38%), Gaps = 11/306 (3%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
L Y + +Y ++N YC+ ++ L EKM + N+ + ++ + R+ +
Sbjct: 697 LKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLA 756
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
+ ++M + I D + Y + + DI + FYEM + + TY+ +
Sbjct: 757 EAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAI 815
Query: 257 ASIYVK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTF 314
S + + ++ E +L + L D + L++ YC ++ RV ++++
Sbjct: 816 ISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGC 875
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA- 373
P +Y L+ L K +D + E ++ + I+ + EEA
Sbjct: 876 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 935
Query: 374 LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVD 433
L+ NA + + M Y +S ++D A + L + Q P VT +
Sbjct: 936 LVGEFEAAGLNADTVTYT---TLMDAYCKSGEMDKAQEILTEMLGKGLQ----PTIVTFN 988
Query: 434 TFFRFF 439
F
Sbjct: 989 VLMNGF 994
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 15/334 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTD---FAVYLDLTAKTNGIAAAEKYFNGLS-EYA 141
+R+F R + +E ++ + D F LD K + A F + +
Sbjct: 199 MRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWK 258
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+ + +LL +CKE A + +M ++ + V +NNL Y + G+ L
Sbjct: 259 PSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDL 318
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASIY 260
+ +M+++ + +Y V +QS ++ R+F EM N C+ TYS L S +
Sbjct: 319 LKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADV--VTYSTLISGF 376
Query: 261 VKAELFEKAELALKKLEEMK-----PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP 315
K + K + + L+EM P H +++ + V + K
Sbjct: 377 CK---WGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCA 433
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P + Y +++ KL + Q + E ES S M ++I +L++ EA
Sbjct: 434 PDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEY 493
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLA 409
F R +A + + + M LR+ +L++A
Sbjct: 494 FKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMA 527
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 9/286 (3%)
Query: 69 MEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAV--YLDLTAKTN 125
+ GK + D++ YC L F R + I+ M E ++ FS T+ AV +D K
Sbjct: 286 LGGKGLAADVVTYCTLVL-GFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQG 344
Query: 126 GIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
I A + + + N + Y AL+N CK ++A L+ M + N + ++
Sbjct: 345 KIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYS 404
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
L + R G+ + ++M Q I Y + D+ E +F EM N+
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDA 302
+ TT+++L S Y K +KA +L K ++ + + LIS C+T+ +
Sbjct: 465 GVEP-TATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAE 523
Query: 303 VNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
+ ++ +++ PT +Y VL++ + ID + E+ +
Sbjct: 524 ASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQK 569
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 97/256 (37%), Gaps = 40/256 (15%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMD 171
F + TN +A A + F+ L E TY L+ YC++ ++A L E M
Sbjct: 508 FTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMH 567
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY------- 224
+ + +T + L + G+ K + ++ + ++N+ L+ + Y + Y
Sbjct: 568 QKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLM 627
Query: 225 -------------------SHLNDIDGV-----ERVFYEMCNECED---KCRWTTYSNLA 257
H IDG + F+++ + D + Y+++
Sbjct: 628 EALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMI 687
Query: 258 SIYVKAELFEKAELA--LKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STF 314
Y K F+KA L EE P + Y L++ C +D ++ ++ +
Sbjct: 688 DTYSKEGSFKKAFECWDLMVTEECFP-NVVTYTALMNGLCKAGEMDRAGLLFKRMQAANV 746
Query: 315 PPTNTSYLVLLQALAK 330
PP + +Y L L K
Sbjct: 747 PPNSITYGCFLDNLTK 762
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRY 145
KFG A + M ++ + + T F + K + A K +N + + N Y
Sbjct: 447 KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVY 506
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ AL++ C A LF+++ E K V +N L Y R G+ +K L+ M
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566
Query: 206 KQRNISLDNLTY 217
Q+ + D TY
Sbjct: 567 HQKGLVPDTYTY 578
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 17/184 (9%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + +R D + Y + + K G ++ A E + M + + F + TA NG
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEEC------FPNVVTYTALMNG 724
Query: 127 IA-AAEKYFNGL-------SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
+ A E GL + N TYG L+ KE + A+ L M + L N
Sbjct: 725 LCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLAN 783
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFY 238
TV N + + +LG+ + ++++M + I D +TY + Y ++ +++
Sbjct: 784 TVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWD 843
Query: 239 EMCN 242
M N
Sbjct: 844 TMLN 847
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 132/317 (41%), Gaps = 17/317 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK + D++ Y V + K G + AL ++ ME + ++ +D K
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A+ F+ + E A N +TY +++ +C A L M E + + + FN
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + ++ G+ + L ++M R I D +TY + + N D + +F M +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP- 430
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL 300
T++ + +Y +A ++ + ++ L E+ R + Y+ LI +C NL
Sbjct: 431 ----DVVTFNTIIDVYCRA---KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 301 DAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
+A ++ ++ P + +LL + ++ + FE + D ++I
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 360 IRAYLQKDMYEEAALIF 376
I + +EA +F
Sbjct: 544 IHGMCKGSKVDEAWDLF 560
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 121/302 (40%), Gaps = 20/302 (6%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLN 152
A+ + ME R++ + F + + + ++ + F L++ + + T+ LL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 153 CYCKE-----------LMTE----RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
C E M E A+ALF++M E+ + FN L G+ +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
LVN+M + + +D +TY + + D + +M E K YS +
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAII 303
Query: 258 SIYVKAELFEKAE-LALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFP 315
K A+ L + LE+ + Y+ +I +C+ DA + +++
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P ++ L+ A K + ++ +E RC D + +I + + + +++A +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 376 FN 377
F+
Sbjct: 424 FD 425
>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
Length = 551
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 22/239 (9%)
Query: 128 AAAEKYFNGLSEYAKNRYT----------YGALLNCYCKELMTERALALFEKMDELKFLG 177
A EK+ + + AK R LL+ +CK M + A A+F ++ K LG
Sbjct: 191 AYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKR-KLLG 249
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
N ++ L + R P+K ++ +M Q + ++ TY+ ++S+ + +F
Sbjct: 250 NAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELF 309
Query: 238 YEMCNECEDKCRWT--TYSNLASIYVKAELFEKAELALKKLEEMKP----RDRKAYHFLI 291
M E T TYS + KA+ E+ + L +M+ D Y LI
Sbjct: 310 EFMRTEGLTVSSPTAKTYSIMIVALAKADRMEE---CFELLSDMRTCGCMPDVTTYKDLI 366
Query: 292 SLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKL-NAIDILKQCFEEWESRC 348
C LDA RV + ++ FPP +Y L L L NA D L+ C E+ C
Sbjct: 367 EGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDALELCERMIEAHC 425
>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
Length = 551
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 22/239 (9%)
Query: 128 AAAEKYFNGLSEYAKNRYT----------YGALLNCYCKELMTERALALFEKMDELKFLG 177
A EK+ + + AK R LL+ +CK M + A A+F ++ K LG
Sbjct: 191 AYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKR-KLLG 249
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
N ++ L + R P+K ++ +M Q + ++ TY+ ++S+ + +F
Sbjct: 250 NAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELF 309
Query: 238 YEMCNECEDKCRWT--TYSNLASIYVKAELFEKAELALKKLEEMKP----RDRKAYHFLI 291
M E T TYS + KA+ E+ + L +M+ D Y LI
Sbjct: 310 EFMRTEGLTVSSPTAKTYSIMIVALAKADRMEE---CFELLSDMRTCGCMPDVTTYKDLI 366
Query: 292 SLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKL-NAIDILKQCFEEWESRC 348
C LDA RV + ++ FPP +Y L L L NA D L+ C E+ C
Sbjct: 367 EGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDALELCERMIEAHC 425
>gi|297844926|ref|XP_002890344.1| F18O14.27 [Arabidopsis lyrata subsp. lyrata]
gi|297336186|gb|EFH66603.1| F18O14.27 [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 106/245 (43%), Gaps = 6/245 (2%)
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELM 159
++ + + S +D++ + + AK N I E+ +S+ + T +L++ Y K
Sbjct: 377 LDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATSLVHMYSKSGN 436
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
ERA FE + + + + Y+ G+P+ LV +M+ + + Y+
Sbjct: 437 LERATEAFENLKSYGLRLDEKIYEAMIMGYVNAGKPKLGERLVKEMQAKELKASEEVYMA 496
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM 279
+++Y+ + D +G + M D + YS Y KA +KA+ ++ ++
Sbjct: 497 LLRAYAQMGDANGAAGISSSMLYASNDPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKL 556
Query: 280 --KPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDI 336
KP D K L+ Y ++LD A+ + + K +Y VL+ +A L I+
Sbjct: 557 GHKP-DDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEE 615
Query: 337 LKQCF 341
+Q
Sbjct: 616 AEQLL 620
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 22/250 (8%)
Query: 137 LSEYAK----NRYTYGALLNCYCKELMTERALALFEK-MDELKFLGNTVAFNNLSTMYLR 191
L+E+A+ NR + ALLN +E T L + E+ +DE F + ++ L ++ +
Sbjct: 340 LAEWAELLEPNRVDWIALLN-QLREGNTNAYLQVAERVLDEKSFNASISDYSKLIHIHAK 398
Query: 192 LGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT 251
E V ++ +M Q I D LT + YS +++ F E +
Sbjct: 399 ENHIEDVERILKKMSQNGIFPDILTATSLVHMYSKSGNLERATEAF-ENLKSYGLRLDEK 457
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVW 307
Y + YV A K +L + ++EM+ ++ KA Y L+ Y + N
Sbjct: 458 IYEAMIMGYVNAG---KPKLGERLVKEMQAKELKASEEVYMALLRAYAQMGD---ANGAA 511
Query: 308 GILKSTF-----PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
GI S P + +Y + ++A K +D K F+E D + ++RA
Sbjct: 512 GISSSMLYASNDPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRA 571
Query: 363 YLQKDMYEEA 372
Y ++ ++A
Sbjct: 572 YKGENSLDKA 581
>gi|388500892|gb|AFK38512.1| unknown [Medicago truncatula]
Length = 249
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T G ++ YCKE AL KM EL N V FN+L YL + + V +
Sbjct: 88 NERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEAL 147
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M++ I D +TY M ++S +D E +F +M + E + YS LA YV+
Sbjct: 148 TLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMV-KAEIEPDIQAYSILAKGYVR 206
Query: 263 AELFEKAELALKKL 276
A +KAE L +
Sbjct: 207 AGQPDKAEALLNSM 220
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 279 MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAID-- 335
+KP +R Y+ LI +C + L+ A N + ++ S P +Y L +A A+ D
Sbjct: 13 VKPNER-TYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNA 71
Query: 336 ---ILKQCFEEWESRCSSYDMRLADVIIRAYLQK-DMYEEAALIFNNAKKRANASARFFK 391
ILK +++ ++ + R +IIR Y ++ +M E ++ + + + F
Sbjct: 72 ERLILK--MQQYNNKVKPNE-RTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFN 128
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEE- 450
S + YL D +E AL+ ++F +P VT T + +D EE
Sbjct: 129 S---LIKGYLDITDTD----GVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEI 181
Query: 451 FCKVLKSLNCLDFSAYSLLIKTYIAAGK 478
F ++K+ D AYS+L K Y+ AG+
Sbjct: 182 FDDMVKAEIEPDIQAYSILAKGYVRAGQ 209
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 138/324 (42%), Gaps = 17/324 (5%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G A + + M+ RK+ + + + +T + A+K F+ + +
Sbjct: 370 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 429
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ YCKE + A +L +M ++ N V + L+ + G+ + L+++M
Sbjct: 430 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ + L+ TY + +ID ++ +M TY+ L Y K+
Sbjct: 490 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAVTYTTLMDAYCKSRE 548
Query: 266 FEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRV--WGILKSTFPPTNTSY 321
+A L+++ E++P ++ L++ +C + L+ ++ W +L+ P T+Y
Sbjct: 549 MVRAHELLRQMLDRELQP-TVVTFNVLMNGFCMSGMLEDGEKLLKW-MLEKGIMPNATTY 606
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI------ 375
L++ N + + + ++ D +++I+ + + +EA +
Sbjct: 607 NSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVG 666
Query: 376 --FNNAKKRANASARFFKSRESFM 397
FN NA + F R+ F+
Sbjct: 667 KGFNLTVSSYNALIKGFYKRKKFL 690
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 15/206 (7%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y ++N YC+ +R L L E+M N +N + + + G+ + ++ +M
Sbjct: 290 SYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM 349
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL-------AS 258
I+ D + Y + + L ++ R+F EM + + + TY+ +
Sbjct: 350 ISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM-QKRKISPDFITYTAVICGLCQTGR 408
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
+ +LF E+ K+LE D Y LI YC + +A + +L+ P
Sbjct: 409 VMEADKLFH--EMVCKRLEP----DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 462
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEE 343
+Y L L K +D + E
Sbjct: 463 IVTYTALADGLCKCGEVDTANELLHE 488
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 5/218 (2%)
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
AL +F + E+ NT ++N ++ +LG+ + L+ QM+ R D ++Y +
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMK 280
Y + ++ V ++ EM + K TY+ + + K +AE L+++ E +
Sbjct: 297 GYCQVGELQRVLKLIEEMQIK-GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355
Query: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQ 339
P D Y LI +C N+ + R++ + K P +Y ++ L + + +
Sbjct: 356 P-DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
F E + D +I Y ++ +EA + N
Sbjct: 415 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 452
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 7/257 (2%)
Query: 84 RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN--GLSEYA 141
SL + GR A +++ ME R ++ ++ + + K +
Sbjct: 261 HSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLK 320
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
N YTY ++ CK A + +M + V + L + +LG L
Sbjct: 321 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 380
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASIY 260
++M++R IS D +TY + + +++F+EM C E TY+ L Y
Sbjct: 381 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD--EVTYTALIDGY 438
Query: 261 VK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTN 318
K ++ E L + L+ + Y L C +D N + + +
Sbjct: 439 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 498
Query: 319 TSYLVLLQALAKLNAID 335
+Y L+ L K ID
Sbjct: 499 YTYNSLVNGLCKAGNID 515
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 101/258 (39%), Gaps = 8/258 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
+R L + G+ A V + M S+ + +D K I AA + F +
Sbjct: 146 IRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGL 205
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N Y AL++ CK + AL + +M + +T+ +N L + G R
Sbjct: 206 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARA 265
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLAS 258
++M + D TY + + + + D VF +M + +C TY L S
Sbjct: 266 FFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSS---RCSPNVVTYGTLIS 322
Query: 259 IYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT 317
K KA L + ++E P D Y L+ C + L+ ++ ++ +
Sbjct: 323 GLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVAN 382
Query: 318 NTSYLVLLQALAKLNAID 335
+ + L+ L K N +D
Sbjct: 383 SQTRTRLIFHLCKANRVD 400
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 94/238 (39%), Gaps = 9/238 (3%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY ALLN CK E A+ L K+ + + V + +L + + + L +M
Sbjct: 71 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEM 130
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAE 264
R ++LD + Y ++ I V+ M ++ C T S + KA
Sbjct: 131 ASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD--VVTLSTMIDGLCKAG 188
Query: 265 LFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF-PPTNTSY 321
A K +E + P + Y LI C +D + +K F P +Y
Sbjct: 189 RIGAAVRIFKSMEARGLAP-NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 247
Query: 322 LVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+L+ L K + + F+E E+ C D+ +++I + + + A +F++
Sbjct: 248 NILIDGLCKSGDVAAARAFFDEMLEAGCKP-DVYTYNILISGFCKAGNTDAACGVFDD 304
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 164/436 (37%), Gaps = 46/436 (10%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K R+ A + + M R + + +A+ + K I A F+ + +
Sbjct: 368 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 427
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
Y Y +L+N YCK+ +RA L M + +++ L R G
Sbjct: 428 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 487
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC------NECEDKCRWTTYS 254
L +M +R I+ +N T+ + + +D R+F +M NE Y
Sbjct: 488 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC 547
Query: 255 NLASIYVKAELFEK-AELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
+ +I +L+++ E+ LK D Y LIS C TS + N L+++
Sbjct: 548 LVGNIRKAFQLYDQMVEMGLKP-------DNYTYRSLISGLCLTSGVSKANEFVADLENS 600
Query: 314 FPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ N S LL + ++E R D+ +I+ A L++ E++
Sbjct: 601 YAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKS 660
Query: 373 ALIFNNAKKRANASARFFK-------SRESFMI-------------YYLRSRQLDLALNE 412
++F K++ F S+E MI Y + + +N
Sbjct: 661 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 720
Query: 413 M---------EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDF 463
+ E E + P + T + F +F E D++ A++ + +
Sbjct: 721 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASI 780
Query: 464 SAYSLLIKTYIAAGKL 479
++++LIK AGK+
Sbjct: 781 VSFNILIKGLCKAGKI 796
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 23/247 (9%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ TY L+ +C+ E AL + M L F+ + N S M L + E LV
Sbjct: 290 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA---NCSFMIDELRKKE----LV 342
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLND-------IDGVERVFYEMCNECEDKCRWTTYSN 255
+ L +L + + +Y+ L D D +R+F EM + TY+
Sbjct: 343 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEP-NEVTYAI 401
Query: 256 LASIYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGIL 310
L K + E A L ++M+ + K Y+ LI+ YC +LD A + G++
Sbjct: 402 LIHALCKRGMIEDA---LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 458
Query: 311 KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYE 370
K PT SY L+ L + + + E R +++ +I + + +
Sbjct: 459 KEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 518
Query: 371 EAALIFN 377
EAA +F+
Sbjct: 519 EAARLFD 525
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 149/356 (41%), Gaps = 39/356 (10%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
T NED+LY +S R+ + + V L + ++ AL ++
Sbjct: 82 TQNEDELYAVMSPYNG-------------------RQLSMRFMVSLLSREPDWQRALALL 122
Query: 100 EWMESRKMHFSYTDFA--VYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYC 155
+W+ + + +S + FA V L + A F+ + + + +RYTY L+ +
Sbjct: 123 DWINDKAL-YSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFG 181
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
K + + +L ++M++ G+ V ++NL + +L K + +++K IS D
Sbjct: 182 KHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPD-- 239
Query: 216 TYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYSNLASIYVKAELFEKA 269
+ +Y+ + ++ G ++F E + E D +YS L +IYV + F +A
Sbjct: 240 -----LIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEA 294
Query: 270 ELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKSTFPPTNTSYLVLLQA 327
++ E K P D + +I +Y +R+ W + K P SY LL+
Sbjct: 295 LSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRV 354
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ + F +S+ ++ + +I Y + +E+A + KKR
Sbjct: 355 YGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRG 410
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+N TY ++N Y K L E+A L ++M + N + ++ + +++ + G+ ++ L
Sbjct: 378 QNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAIL 437
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+++ + +D + Y + +Y + +R+ +E+ ++ R T LA
Sbjct: 438 FQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHEL-KRPDNIPRDTAIGILA---- 492
Query: 262 KAELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST--FPPTN 318
+A E+A ++ + + +D + +I+L+ V V+ ++ FP ++
Sbjct: 493 RAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSD 552
Query: 319 TSYLVLLQALAKLNAID----ILKQCFEE 343
LV L A KL D + +Q EE
Sbjct: 553 VIALV-LNAFGKLREFDKADALYRQMHEE 580
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 5/197 (2%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYG 148
++ AL + M K T + +D+ + + A++ F + + N +Y
Sbjct: 290 KFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYN 349
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
LL Y + + A+ LF M N V +N + +Y + + EK L+ +MK+R
Sbjct: 350 TLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKR 409
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
I + +TY + + +D + ++ + Y + Y +A L
Sbjct: 410 GIEPNAITYSTIISIWEKAGKLDRAA-ILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAH 468
Query: 269 AELALKKLEEMK--PRD 283
A+ L +L+ PRD
Sbjct: 469 AKRLLHELKRPDNIPRD 485
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 168/445 (37%), Gaps = 42/445 (9%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWM-ESRKMHFSYTDFAVYLDLTAKTN 125
ME K D + Y + L K GR A+E +E + + ++ +D
Sbjct: 272 MEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLID------ 325
Query: 126 GIAAAEKYFNGLSEY---------AKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
G+ A +Y G Y + + Y ++ + T A A F++M E F
Sbjct: 326 GLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFT 385
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
+T +N L G + R L+++M + N+ LD TY + +D +V
Sbjct: 386 PDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQV 445
Query: 237 FYEMCNECEDKCRWT--TYSNLASIYVKAELFEKAELALKKLE--------------EMK 280
F M E C + TY+ L +A E+A + K+E +
Sbjct: 446 FDGM---VEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQ 502
Query: 281 PRDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQ 339
RD + L+ C + L A + GI+ S P +Y LL L K+ +D +
Sbjct: 503 VRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALR 562
Query: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY 399
F E + + D +I + L+ Y +A +F + + S M
Sbjct: 563 LFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPS--MPIYNSMMRS 620
Query: 400 YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
R ++L A+N L ++++ + + + FEE + E K+ +
Sbjct: 621 LCRMQKLSQAINLWFDHLP--RKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYG 678
Query: 460 CLDFSAYSLLIKTYIAAGKLASDMR 484
++ Y++ + I AG++ ++
Sbjct: 679 SVNSCPYTIWLIGLIQAGRIEDALK 703
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 9/154 (5%)
Query: 90 GRYRHALEVIEWMES----RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
GR+ A+E ME R F Y AV L A + A +N + N
Sbjct: 153 GRHHEAVEAFSRMEGEFGCRPTTFVYN--AVLRVLVASGGAVPLALALYNRMVAAGCLPN 210
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
R TY L++ CK AL LF++M N L + GQ ++ L++
Sbjct: 211 RATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLH 270
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDID-GVERV 236
M+ + D +TY ++ +D +ER+
Sbjct: 271 SMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERL 304
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 138/338 (40%), Gaps = 32/338 (9%)
Query: 70 EGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA 129
+G + +DM + S K G + ++++ M+ + S + + +
Sbjct: 178 KGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVRKGRYMM 237
Query: 130 AEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A+++FN + + R+TY L+ + + A+ +E M + V +N +
Sbjct: 238 AKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMIN 297
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
Y R + E+ L +MK ++I+ ++Y ++ Y ++ I+ R+ EM K
Sbjct: 298 GYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEM-KSVGIK 356
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLD-AVN 304
TY+ L A +A+ LK++ + P+D + L++ C +L AV+
Sbjct: 357 PNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVD 416
Query: 305 RVWGILKSTFPPTNTSYLVLLQALAKL---------------NAIDILKQCFEEWESR-- 347
+ G++K + P Y VL++ K N I + Q E ES
Sbjct: 417 VLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLEMESGAY 476
Query: 348 -------CSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
CS A+++ R L+K + E L FNN
Sbjct: 477 NPVIQYLCSHGQTGKAEILFRQLLKKGV--EDPLAFNN 512
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 121/276 (43%), Gaps = 7/276 (2%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTY 147
G + A + + + + + S + +D K + AAE N + N + +
Sbjct: 324 GNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 383
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L+N YC++ M + A +++ M++ F + N +++ + RL + ++ + + +M +
Sbjct: 384 NTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 443
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
+ L ++Y + Y +++ +R+F EM ++ E + TY+ + Y K +
Sbjct: 444 GGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK-EVQPNAITYNVMIYAYCKQGKVK 502
Query: 268 KAE--LALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVL 324
+A A K M P D Y LI C N+D R++ + + +Y V+
Sbjct: 503 EARKLWANMKANGMDP-DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 561
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
+ L+K D ++E + + + D ++ +I
Sbjct: 562 ISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALI 597
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/313 (17%), Positives = 140/313 (44%), Gaps = 7/313 (2%)
Query: 71 GKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIA 128
GK ++ + Y + + K + ++++ M+ + ++ + + ++L+ K +
Sbjct: 233 GKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMN 292
Query: 129 AAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
EK F+ + E + + Y +L++ C++ +RA LF+++ E L ++ + L
Sbjct: 293 DVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALI 352
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
++G+ L+N+M+ + +++ + + + Y ID + Y++ +
Sbjct: 353 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMI-YDVMEKKGF 411
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNR 305
+ T + +AS + + + +++A+ L ++ E R +Y LI +YC N++ R
Sbjct: 412 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKR 471
Query: 306 VWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL 364
++ + S P +Y V++ A K + ++ + ++ D +I
Sbjct: 472 LFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGEC 531
Query: 365 QKDMYEEAALIFN 377
D +EA +F+
Sbjct: 532 IADNVDEAMRLFS 544
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 191 RLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW 250
R G+ EK + L+ + + I + TY + +Y D GVE++ M + +
Sbjct: 217 RRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNK- 275
Query: 251 TTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRV 306
TY+ L + VK E K +EM+ R D Y LIS C N+ +
Sbjct: 276 VTYTLLIELSVKNGKMNDVE---KLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLL 332
Query: 307 WGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
+ L + P++ +Y L+ + K+ + + E +S+ + + + +I Y +
Sbjct: 333 FDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCR 392
Query: 366 KDMYEEAALIFNNAKKRA 383
K M +EA++I++ +K+
Sbjct: 393 KGMIDEASMIYDVMEKKG 410
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 36/224 (16%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMD 171
+ L + +K N + A+ F ++ + + AL++ +C + A L + MD
Sbjct: 434 YTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMD 493
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+K + V FN + + R G+ E+ R L ++MK+R I D++++ + YS DI
Sbjct: 494 RMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIK 553
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLI 291
RV EM + + TY+ L K ++ +LA + L+EM
Sbjct: 554 DAFRVRNEMLDTGFNPTVL-TYNALVQGLCKN---QEGDLAEELLKEM------------ 597
Query: 292 SLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAID 335
+ P +T+Y L++ +AK+N D
Sbjct: 598 ------------------VSKGMTPDDTTYFTLIEGIAKVNIPD 623
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 127/310 (40%), Gaps = 42/310 (13%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMD 171
F + +++ K + A+ + + S N TY +++ YC E A A+ M
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
K ++ + +L + + G+ E+ + +M Q+ + + Y + + + ++D
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHF 289
EM + +TY++L + ++AE +K+++E + P D Y+
Sbjct: 344 MASAYKDEMLKKGISPT-MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP-DAITYNI 401
Query: 290 LISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEEW 344
LI+ YC +N + +L S PT +Y LL L+K N A D+ K+ E
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
Query: 345 ------------ESRCSSYDMRLA-------------------DVIIRAYLQKDMYEEAA 373
+ CS+ +++ A + I++ + ++ EEA
Sbjct: 462 VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521
Query: 374 LIFNNAKKRA 383
+F+ K+R
Sbjct: 522 ELFDEMKRRG 531
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 9/223 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T +LL+ + K TE A L+ +M L+ + FN + + + G+ +K + V M
Sbjct: 188 TCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM 247
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + + +TY + Y ++ + + M + + +T Y +L S K
Sbjct: 248 ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFT-YGSLISGMCKQGR 306
Query: 266 FEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTS 320
E+A K EEM + + Y+ LI +CN NLD + +LK PT ++
Sbjct: 307 LEEAS---KIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
Y L+ AL D + +E + + S D +++I Y
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/335 (17%), Positives = 135/335 (40%), Gaps = 42/335 (12%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ L K G+ + A + + ME+ + + + + + + AA+ + +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ------ 194
+ +TYG+L++ CK+ E A +FE+M + + V +N L + G
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 195 ------PEKVRP-----------------------LVNQMKQRNISLDNLTYIVWMQSYS 225
+ + P ++ +++++ IS D +TY + + Y
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYC 407
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRD 283
+ + EM K TY++L + K ++A+ KK+ E + P D
Sbjct: 408 RCANAKKAFLLHDEMLAS-GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLP-D 465
Query: 284 RKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
++ LI +C+ SN+ A + + + PP ++ ++Q + ++ ++ F+
Sbjct: 466 AIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFD 525
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
E + R D + +I Y ++ ++A + N
Sbjct: 526 EMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 119/324 (36%), Gaps = 40/324 (12%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ + + D Y + + K GR A ++ E M + + S + +D
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A Y + + + TY +L++ E T+ A + +++ E + + +N
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM---- 240
L Y R +K L ++M I TY + S N + + +F ++
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
Query: 241 ---------------CNECEDKCRWTTYSNLASIYVKAELFE------------KAELAL 273
C+ K + ++ + V + K E A
Sbjct: 462 VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521
Query: 274 KKLEEMKPRDRKAYHF----LISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQAL 328
+ +EMK R K H LIS Y ++ RV +L + F PT +Y L+Q L
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581
Query: 329 AKLNAIDILKQCFEEWESRCSSYD 352
K D+ ++ +E S+ + D
Sbjct: 582 CKNQEGDLAEELLKEMVSKGMTPD 605
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 5/238 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY L++ + K +RA LF +M+E N + N L + G+ +
Sbjct: 392 NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFF 451
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYV 261
N+MK + + + TY + ++ +N+I+ + F EM + C Y +L S
Sbjct: 452 NEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDA--VVYYSLISGLC 509
Query: 262 KAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNT 319
A A + + KL+ DR Y+ LIS +C L+ V + ++ T P
Sbjct: 510 IAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTI 569
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y L+ L K + E+ + II AY K +E IF
Sbjct: 570 TYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFG 627
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 123/313 (39%), Gaps = 22/313 (7%)
Query: 146 TYGALLNCYCKELMTERALALFEKM---DELKFLG---NTVAFNNLSTMYLRLGQPEKVR 199
T+G L+N CK + AL +F+++ ++G + V FN L ++G+ E
Sbjct: 318 TFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGL 377
Query: 200 PLVNQMKQRNISLDN-LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
L+ +MK NI+ N +TY + + + D +F +M NE + T + L
Sbjct: 378 SLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQM-NEEGVQPNVITLNTLVD 436
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKST 313
K + A++ EMK + K Y LIS +C +N++ A+ +L S
Sbjct: 437 GLCK---HGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSG 493
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P Y L+ L ++ + + S D +V+I + +K E
Sbjct: 494 CSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVY 553
Query: 374 LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVD 433
+ ++ + + + Y ++ A ME + E RP VT
Sbjct: 554 ELLTEMEETGVKPDTI--TYNTLISYLGKTGDFATASKVMEKMIKEG----LRPSVVTYG 607
Query: 434 TFFRFFEEEKDVD 446
+ +K+VD
Sbjct: 608 AIIHAYCSKKNVD 620
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
L+ ++ +R Y L++ +CK+ ER L +M+E +T+ +N L + + G
Sbjct: 526 LAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFA 585
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
++ +M + + +TY + +Y ++D ++F EMC+ + Y+ L
Sbjct: 586 TASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNIL 645
Query: 257 ASIYVKAELFEKAELALKKLEEMK 280
+ ++ A+ +E+MK
Sbjct: 646 IDALCRNNDVDR---AISLMEDMK 666
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG--IAAAEKYFNGLSEY 140
V L R+ AL EW+++R + + + L NG + +EK ++
Sbjct: 113 VTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGR 172
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ YT+ L+NC + E AL FE+M + + V +N++ MY R+G+ +
Sbjct: 173 GIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEA 232
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
L ++K N LD +TY Y+ D + ++ EM
Sbjct: 233 VELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEM 274
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 124/349 (35%), Gaps = 49/349 (14%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y NRYTY +L E + L E+M + F+ L R QPE+
Sbjct: 139 YEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEAL 198
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDI-DGVERVFYEMCNECEDKCRWTTYSNLAS 258
+MK I D +TY + Y + + + VE YE K TY +A+
Sbjct: 199 KWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVE--LYEKLKSVNWKLDTVTYGAIAN 256
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
+Y +A ++ ++ ++EM+ S P
Sbjct: 257 VYARAGDYQSI---MQLVQEMR------------------------------DSGSSPNA 283
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
L+ L+K ++ K+ F E + S +++ Y + Y++A ++
Sbjct: 284 VIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYET 343
Query: 379 AKKRA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
K + S + R Q + L EM K+ P +T T
Sbjct: 344 LKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEM-------KRAGCNPDHLTYRTAMN 396
Query: 438 FFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ + VD A F KV+ D ++++I+ A KLA ++ Q
Sbjct: 397 TYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIR----ACKLAGEIEQ 441
>gi|255551050|ref|XP_002516573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544393|gb|EEF45914.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 396
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T G +++ YCKE + AL +M EL N V FN+L ++ + V ++
Sbjct: 44 NERTCGTVISGYCKEGRIKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVL 103
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M++ N+ D +T+ M ++S ++ +F +M + + YS LA YV+
Sbjct: 104 KLMEEFNVKPDVITFSTIMNAWSKAGYMNKCREIFDDMM-KAGIQPDGHAYSILAKGYVR 162
Query: 263 AELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
A+ EKAE L + E P + + +IS +C+T +D RV+
Sbjct: 163 AQEPEKAEQLLTTMMESGFHP-NVVIFTTVISGWCSTDRMDCAIRVF 208
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 8/224 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDF----AVYLDLTAKTNGIAAAEKYFNGLSEYAKN 143
K GR + AL + M+ +H + F ++D+ + NG+ K + +
Sbjct: 57 KEGRIKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDR-NGVDEVLKLMEEFN-VKPD 114
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
T+ ++N + K + +F+ M + + A++ L+ Y+R +PEK L+
Sbjct: 115 VITFSTIMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLT 174
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
M + + + + + + + +D RVF +MC E T+ L + +A
Sbjct: 175 TMMESGFHPNVVIFTTVISGWCSTDRMDCAIRVFDKMC-EYGISPNLKTFETLIGGFSEA 233
Query: 264 ELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRV 306
+ KAE L+ + E +K+ L++ + L VNR+
Sbjct: 234 KQPWKAEDILQIMREYNVEPKKSTMLLVAEAWGSIGLTKEVNRI 277
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 135/328 (41%), Gaps = 7/328 (2%)
Query: 67 YIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
Y M + + D+L Y + + G A ++ M + + F ++ K
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 125 NGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
+ A + N + + + N TY L++ CKE + A L +M ++ N +
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N++ + G E+ LV + + ++ D +TY M +Y ++D + + EM
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALK-KLEEMKPRDRKAYHFLISLYCNTSNLD 301
+ T++ L + + + E E L L + + ++ L+ YC +NL
Sbjct: 555 KGLQP-TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613
Query: 302 AVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
A ++ + S P +Y L++ K + F+E + + S + V+I
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 361 RAYLQKDMYEEAALIFNNAKKRANASAR 388
+ +L++ + EA +F+ ++ A+ +
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADK 701
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 5/237 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N Y YG+++ C+ A F +M L +TV + L + + G
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASIYV 261
+M R+I+ D LTY + + + D+ ++F+EM C E T++ L + Y
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS--VTFTELINGYC 432
Query: 262 KAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
KA + A + ++ + Y LI C +LD+ N + + K P
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y ++ L K I+ + E+E+ + D ++ AY + ++A I
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 138/324 (42%), Gaps = 17/324 (5%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G A + + M+ RK+ + + + +T + A+K F+ + +
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ YCKE + A +L +M ++ N V + L+ + G+ + L+++M
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ + L+ TY + +ID ++ +M TY+ L Y K+
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAVTYTTLMDAYCKSRE 448
Query: 266 FEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRV--WGILKSTFPPTNTSY 321
+A L+++ E++P ++ L++ +C + L+ ++ W +L+ P T+Y
Sbjct: 449 MVRAHELLRQMLDRELQP-TVVTFNVLMNGFCMSGMLEDGEKLLKW-MLEKGIMPNATTY 506
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI------ 375
L++ N + + + ++ D +++I+ + + +EA +
Sbjct: 507 NSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVG 566
Query: 376 --FNNAKKRANASARFFKSRESFM 397
FN NA + F R+ F+
Sbjct: 567 KGFNLTVSSYNALIKGFYKRKKFL 590
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 96/254 (37%), Gaps = 22/254 (8%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N YTY ++ CK A + +M + V + L + +LG L
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASIYV 261
++M++R IS D +TY + + +++F+EM C E TY+ L Y
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD--EVTYTALIDGYC 339
Query: 262 K-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
K ++ E L + L+ + Y L C +D N + + +
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWE----------------SRCSSYDMRLADVIIRAY 363
+Y L+ L K ID + ++ E + C S +M A ++R
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459
Query: 364 LQKDMYEEAALIFN 377
L +++ + + FN
Sbjct: 460 LDREL-QPTVVTFN 472
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 132/317 (41%), Gaps = 17/317 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK + D++ Y V + K G + AL ++ ME + ++ +D K
Sbjct: 247 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 306
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A+ F+ + E A N +TY +++ +C A L M E + + + FN
Sbjct: 307 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 366
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + ++ G+ + L ++M R I D +TY + + N D + +F M +
Sbjct: 367 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP- 425
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL 300
T++ + +Y +A ++ + ++ L E+ R + Y+ LI +C NL
Sbjct: 426 ----DVVTFNTIIDVYCRA---KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 478
Query: 301 DAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
+A ++ ++ P + +LL + ++ + FE + D ++I
Sbjct: 479 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 538
Query: 360 IRAYLQKDMYEEAALIF 376
I + +EA +F
Sbjct: 539 IHGMCKGSKVDEAWDLF 555
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 119/297 (40%), Gaps = 15/297 (5%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLN 152
A+ + ME R++ + F + + + ++ + F L++ + + T+ LL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 153 CYCKELMTERALALF----------EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
C E ALALF ++M E+ + FN L G+ + LV
Sbjct: 185 GLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 244
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
N+M + + +D +TY + + D + +M E K YS + K
Sbjct: 245 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAIIDRLCK 303
Query: 263 AELFEKAE-LALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTS 320
A+ L + LE+ + Y+ +I +C+ DA + +++ P +
Sbjct: 304 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 363
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ L+ A K + ++ +E RC D + +I + + + +++A +F+
Sbjct: 364 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 420
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 161/428 (37%), Gaps = 46/428 (10%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYG 148
R+ A + + M R + + +A+ + K I A F+ + + Y Y
Sbjct: 353 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYN 412
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
+L+N YCK+ +RA L M + +++ L R G L +M +R
Sbjct: 413 SLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAER 472
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC------NECEDKCRWTTYSNLASIYVK 262
I+ +N T+ + + +D R+F +M NE Y + +I
Sbjct: 473 GIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKA 532
Query: 263 AELFEK-AELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT-S 320
+L+++ E+ LK D Y LIS C TS + N L++++ N S
Sbjct: 533 FQLYDQMVEMGLKP-------DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFS 585
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
LL + ++E R D+ +I+ A L++ E++ ++F K
Sbjct: 586 LTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMK 645
Query: 381 KRANASARFFK-------SRESFMI-------------YYLRSRQLDLALNEM------- 413
++ F S+E MI Y + + +N +
Sbjct: 646 EQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLG 705
Query: 414 --EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIK 471
E E + P + T + F +F E D++ A++ + + ++++LIK
Sbjct: 706 SAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIK 765
Query: 472 TYIAAGKL 479
AGK+
Sbjct: 766 GLCKAGKI 773
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 23/247 (9%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ TY L+ +C+ E AL + M L F+ + N S M L + E LV
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA---NCSFMIDELRKKE----LV 319
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLND-------IDGVERVFYEMCNECEDKCRWTTYSN 255
+ L +L + + +Y+ L D D +R+F EM + TY+
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNE-VTYAI 378
Query: 256 LASIYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGIL 310
L K + E A L ++M+ + K Y+ LI+ YC +LD A + G++
Sbjct: 379 LIHALCKRGMIEDA---LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 435
Query: 311 KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYE 370
K PT SY L+ L + + + E R +++ +I + + +
Sbjct: 436 KEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495
Query: 371 EAALIFN 377
EAA +F+
Sbjct: 496 EAARLFD 502
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 6/241 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y +++C+ K ++A + ++M E L N V FN L + Y +LG + ++ +
Sbjct: 423 SYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKML 482
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + D +T+ + H + +D F EM E + TY+ L A
Sbjct: 483 MEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMA-EWGVRPNAHTYNVLMHALCSAGH 541
Query: 266 FEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYL 322
KA L K+++ + P D +++ I +C +D ++ +L+ P N +Y
Sbjct: 542 VNKAIDLLNKMKKDGITP-DAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYN 600
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV-IIRAYLQKDMYEEAALIFNNAKK 381
L++AL ID K+ ES SS + I+ A + + +A + N +
Sbjct: 601 SLIKALCDERRIDEAKEILLLMESSGSSATTHHTHLPIVSALTKTGQFSKAGQLMNKYNR 660
Query: 382 R 382
R
Sbjct: 661 R 661
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 2/190 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G +A V++ + + F ++ T+ + A FN ++E+ N +
Sbjct: 468 KLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAH 527
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L++ C +A+ L KM + + +FN + R+ + +K R + N M
Sbjct: 528 TYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAM 587
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + DN TY +++ ID + + M + T+ + S K
Sbjct: 588 LRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGSSATTHHTHLPIVSALTKTGQ 647
Query: 266 FEKAELALKK 275
F KA + K
Sbjct: 648 FSKAGQLMNK 657
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 9/178 (5%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIME-GKTVRKDMLEYCVRSLRKFGRYRHALEVIEW 101
ED L++R A+ ++ AL A + G V +++L + S + G ++A EV
Sbjct: 113 EDALWRRGPAV------LSAALVAEVRGCGCEVSEELLRALIASWGRLGLAQYAHEVFVQ 166
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELM 159
M + S + + + + + A F + + +TY L++ C+ +
Sbjct: 167 MPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGI 226
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
+ AL L +M+ N + L + G+PE + + MK++ +S + +Y
Sbjct: 227 IDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASY 284
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 129/333 (38%), Gaps = 53/333 (15%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN------ 143
GRYR A+ V + ME + + V L++ K + GL E KN
Sbjct: 47 GRYREAVMVFKKMEEEGCKPTLITYNVILNVYGK---MGMPWNKITGLFEGMKNAGILPD 103
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGN------------------------- 178
YTY L+ C + + E A A+FE M + F+ +
Sbjct: 104 EYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLR 163
Query: 179 ----------TVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN 228
V +N+L + Y R G E+ L NQM +R I LD TY + +
Sbjct: 164 EMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTG 223
Query: 229 DIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDR 284
+ RVF EM C+ + A I + + AE+ +K EE+K D
Sbjct: 224 KDESAMRVFEEMRTA---GCKPNICTFNALIKMHGNRGKFAEM-MKVFEEIKICCCVPDI 279
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
++ L++++ V+ V+ +K F P +Y L+ A ++ + D ++
Sbjct: 280 VTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKR 339
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ D+ + ++ A + ++E++ I
Sbjct: 340 MLDTGITPDLSTYNAVLAALARGGLWEQSEKIL 372
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 129/337 (38%), Gaps = 45/337 (13%)
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
AV +++ K ++ A N L + + + Y Y +L+ A+ +F+KM+E
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 173 LKFLGNTVAFNNLSTMYLRLGQP-EKVRPLVNQMKQRNISLDNLTYIVWMQ--------- 222
+ +N + +Y ++G P K+ L MK I D TY +
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 223 -------------------SYSHLNDIDGVER-------VFYEM-CNECEDKCRWTTYSN 255
+Y+ L D+ G R V EM N C TY++
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPS--IVTYNS 179
Query: 256 LASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST- 313
L S Y + L E+A EL + +E D Y ++S + T ++ RV+ +++
Sbjct: 180 LISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAG 239
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P ++ L++ + + FEE + C D+ + ++ + Q M E +
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVS 299
Query: 374 LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLAL 410
+F K+ R + + + Y R D A+
Sbjct: 300 GVFKEMKRVGFVPER--DTYNTLISAYSRCGSFDQAM 334
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 110/247 (44%), Gaps = 5/247 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ R TY L++ Y + ++A+A++++M + + +N + R G E+
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSE 369
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
++ +M+ + LT+ + +Y++ +I + + E+C+ + L +
Sbjct: 370 KILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEP-HAVLLKTLVLV 428
Query: 260 YVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPP 316
K +L +AE A +L+ P D + +I++Y + N + +K S F P
Sbjct: 429 NSKCDLLLEAERAFLELKRKGFSP-DLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTP 487
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ +Y L+ ++ + ++ +E ++ D+ + +I AY + +EA+ IF
Sbjct: 488 SLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIF 547
Query: 377 NNAKKRA 383
+ ++
Sbjct: 548 SEMRESG 554
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 123/300 (41%), Gaps = 7/300 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI--AAAEKYFNGLSEY 140
+R + + G+ A V + M R + + F + K + + A A + +
Sbjct: 121 MRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGI 180
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A + YTYGA + CK + A+ +FE+M E NTV L + + G
Sbjct: 181 APDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLE 240
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC--EDKCRWTTYSNLAS 258
L +M R + D + Y + + + D+ + EM + DK +TT +
Sbjct: 241 LRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL--IDG 298
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKAYHFLIS-LYCNTSNLDAVNRVWGILKSTFPPT 317
+ EL E+ + +E D Y LIS L ++DA + ++++ P
Sbjct: 299 CCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPD 358
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
NT+Y +++ A K + + +E +++ + + +V++ + + A ++ N
Sbjct: 359 NTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLN 418
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 161/436 (36%), Gaps = 46/436 (10%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K R+ A + + M R + + +A+ + K I A F+ + +
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
Y Y +L+N YCK+ +RA L M + +++ L R G
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 464
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC------NECEDKCRWTTYS 254
L +M +R I+ +N T+ + + +D R+F +M NE Y
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYC 524
Query: 255 NLASIYVKAELFEK-AELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
+ +I +L+++ E+ LK D Y LIS C TS + N L+++
Sbjct: 525 LVGNIRKAFQLYDQMVEMGLKP-------DNYTYRSLISGLCLTSGVSKANEFVADLENS 577
Query: 314 FPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ N S LL + ++E R D+ +I+ A L++ E++
Sbjct: 578 YAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKS 637
Query: 373 ALIFNNAKKRANASARFFK-------SRESFMIYYLRSRQLDLA---------------- 409
++F K++ F S+E MI L +
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 697
Query: 410 ------LNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDF 463
L E E + P + T + F +F E D++ A++ + +
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASI 757
Query: 464 SAYSLLIKTYIAAGKL 479
++++LIK AGK+
Sbjct: 758 VSFNILIKGLCKAGKI 773
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 23/247 (9%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ TY L+ +C+ E AL + M L F+ + N S M L + E LV
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA---NCSFMIDELRKKE----LV 319
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLND-------IDGVERVFYEMCNECEDKCRWTTYSN 255
+ L +L + + +Y+ L D D +R+F EM + TY+
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEP-NEVTYAI 378
Query: 256 LASIYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGIL 310
L K + E A L ++M+ + K Y+ LI+ YC +LD A + G++
Sbjct: 379 LIHALCKRGMIEDA---LCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 435
Query: 311 KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYE 370
K PT SY L+ L + + + E R +++ +I + + +
Sbjct: 436 KEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495
Query: 371 EAALIFN 377
EAA +F+
Sbjct: 496 EAARLFD 502
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 127/284 (44%), Gaps = 16/284 (5%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G + GA + + M+ + ++ D + Y + L K R +A +++ M+ ++ + F
Sbjct: 389 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 448
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNR-----YTYGALLNCYCKELMTERALALFEK 169
+D +T + EK F LSE +N +YG+++N +CK A+A+ +
Sbjct: 449 NTLIDAYGRTGQL---EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 505
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M L N +N + Y+ G ++ LV +MK IS +TY + ++ + +
Sbjct: 506 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 565
Query: 230 IDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAY 287
I E + + N D + T +++ + + + +L + + + Y
Sbjct: 566 ISEAEEIINSLSNHRLIPDAVSYNTL--ISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 623
Query: 288 HFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAK 330
H LIS L+ + ++ ++++ P+N + ++++A +K
Sbjct: 624 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 667
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 121/304 (39%), Gaps = 13/304 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L + GR +++ M S+KM +++ D ++ A F +Y K
Sbjct: 277 LSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF---GKYLK 333
Query: 143 NRYTYG-----ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N T G LLN CK+ A + + + + V +N L Y + G+ E
Sbjct: 334 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEG 393
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
QMK R+I D++TY + I + + EM + + T++ L
Sbjct: 394 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT-VETFNTLI 452
Query: 258 SIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTF 314
Y + EK + L +++E +KP + +Y +++ +C + +AV + +
Sbjct: 453 DAYGRTGQLEKCFIVLSEMQENGLKP-NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 511
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P Y ++ A + D E+ +S S + +++I+ + EA
Sbjct: 512 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 571
Query: 375 IFNN 378
I N+
Sbjct: 572 IINS 575
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 132/317 (41%), Gaps = 17/317 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK + D++ Y V + K G + AL ++ ME + ++ +D K
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A+ F+ + E A N +TY +++ +C A L M E + + + FN
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + ++ G+ + L ++M R I D +TY + + N D + +F M +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP- 430
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL 300
T++ + +Y +A ++ + ++ L E+ R + Y+ LI +C NL
Sbjct: 431 ----DVVTFNTIIDVYCRA---KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 301 DAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
+A ++ ++ P + +LL + ++ + FE + D ++I
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 360 IRAYLQKDMYEEAALIF 376
I + +EA +F
Sbjct: 544 IHGMCKGSKVDEAWDLF 560
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 121/302 (40%), Gaps = 20/302 (6%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLN 152
A+ + ME R++ + F + + + ++ + F L++ + + T+ LL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 153 CYCKE-----------LMTE----RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
C E M E A+ALF++M E+ + FN L G+ +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
LVN+M + + +D +TY + + D + +M E K YS +
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAII 303
Query: 258 SIYVKAELFEKAE-LALKKLEEMKPRDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFP 315
K A+ L + LE+ + Y+ +I +C+ DA + +++
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P ++ L+ A K + ++ +E RC D + +I + + + +++A +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 376 FN 377
F+
Sbjct: 424 FD 425
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 116/289 (40%), Gaps = 5/289 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRY 145
+FG ++ A M + F +D +K + A K F + + A N
Sbjct: 161 RFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIV 220
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +LLN C + A+ LFE M E + +++N L Y G+ E+ L +M
Sbjct: 221 TYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKM 280
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ ++ TY + +++ I + +F M C TY+ L K
Sbjct: 281 QYEELTPSITTYTILLKALYQNGRIRTAKELFNNM-QICGQSPSLDTYTVLLDGLCKNGC 339
Query: 266 FEKAELALKKLEEMKPRDR-KAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLV 323
E+A + L+ +K + + Y LI ++ ++ + + P +Y +
Sbjct: 340 IEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNI 399
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
++ L K + ++ F + E D + IIR +LQ++ ++A
Sbjct: 400 MINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKA 448
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 126/307 (41%), Gaps = 11/307 (3%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
Y + +LRK + R A+E+ M S ++ + + +D K K F +
Sbjct: 49 YLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINM 108
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
N Y +L+N C+ A+ LF++M N + +N+L R G ++
Sbjct: 109 GICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEA 168
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
+QM I D +T+ + S + ++F M + E TY++L +
Sbjct: 169 TRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAP-NIVTYNSLLN 227
Query: 259 IYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-ST 313
L + + A++ E M R D +Y+ LI+ YC + + ++ ++
Sbjct: 228 GLC---LHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P+ T+Y +LL+AL + I K+ F + S + V++ + EEA
Sbjct: 285 LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344
Query: 374 LIFNNAK 380
+F + K
Sbjct: 345 DVFRSLK 351
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 119/294 (40%), Gaps = 7/294 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
+ G R A ++ M + ++ +D K A A + F+ + + +
Sbjct: 94 RLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTV 153
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y L++C K+ + AL L E M+ + + +N + + G+ EK M
Sbjct: 154 VYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMM 213
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASIYVKAE 264
K+R S D +TY + L D +F EM N+C TT+ L KA
Sbjct: 214 KRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPD--LTTFGTLIDTLAKAG 271
Query: 265 LFEKAELALKKLEEM-KPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYL 322
E A +L +M + Y+ LIS +C + +D ++ +++ + P + +Y
Sbjct: 272 RMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYT 331
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+L+ ++ + + +E + + +V+IR+ E+A +F
Sbjct: 332 ILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLF 385
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 2/160 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
+ L+K R A ++ + M++ K T F +D AK + A + L + +
Sbjct: 229 LNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGH 288
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N Y Y AL++ +C+ ++ LF+ M E +++ + L + R G
Sbjct: 289 VPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAME 348
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
L+ +M + + TY V ++S S ++ +F EM
Sbjct: 349 LLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEM 388
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 94/242 (38%), Gaps = 17/242 (7%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N ++ L+ CK ALA+F++M + N L RLG + R L+
Sbjct: 46 NAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLL 105
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT--YSNLASIY 260
+ M LD TY M + VF M C T Y+ L S
Sbjct: 106 HHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKA---GCMPDTVVYNVLISCL 162
Query: 261 VKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-STFP 315
K K + AL+ LE+M + D + Y+ +I + + + +G++K
Sbjct: 163 GKQ---GKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS 219
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM----RLADVIIRAYLQKDMYEE 371
P +Y LL L KL D F+E ++ D+ L D + +A +D E+
Sbjct: 220 PDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQ 279
Query: 372 AA 373
+A
Sbjct: 280 SA 281
>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
Length = 807
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Query: 127 IAAAEKYFNGLSEYAKN--RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I A+ F + +Y N R+TY +++ CK A +F+ + E + V N+
Sbjct: 266 IQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNS 325
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + G ++ ++ M+ + D +TY + + + D++ R+ ++ +
Sbjct: 326 LINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQ- 384
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAV 303
+ TYS L + K LF + E ++ + D AY LI +C +
Sbjct: 385 GIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRA 444
Query: 304 NRVWGILKST--FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
+VW ++ + PT+ +++ +L L K +D + E S+ D+ L +V+I
Sbjct: 445 LQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVID 504
Query: 362 AY 363
Y
Sbjct: 505 GY 506
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 134/348 (38%), Gaps = 22/348 (6%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N +T+ +++ CK+ A ALF +M + + V +N+L Y + G+ E+V
Sbjct: 196 APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVEL 255
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
LV++M++ + D +TY + +S I+ F EM R +N+ ++
Sbjct: 256 LVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEM-------KRLGVMANVVTLS 308
Query: 261 VKAELFEKAEL---ALKKLEEMKPRDRKAYHF----LISLYCNTSNL-DAVNRVWGILKS 312
+ F K L A+K +M+ R F L+ C L DA+ + ++
Sbjct: 309 TFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 368
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y V++ L K + + E + L +I + E A
Sbjct: 369 GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERA 428
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTV 432
+ N K N S +I+ L Q L+E ++ L + RP V
Sbjct: 429 LDLLNEMK---NKGMELDVSLYGTLIWGLCKVQ---KLDEAKSLLHKMDDCGLRPNTVIY 482
Query: 433 DTFF-RFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
T FF+ K+ + K+ S + Y LI AG +
Sbjct: 483 TTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSI 530
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 4/179 (2%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S N TY AL++ CK A++ F+KM EL N + L + ++G K
Sbjct: 508 SGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSK 567
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
L+N+M + +SLD + Y + + D+ G + +M E + Y+
Sbjct: 568 AVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMI-ETGLQLDLYCYTCFI 626
Query: 258 SIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF 314
S + + ++A L ++ + P D+ AY+ LI Y N++ + + ++S
Sbjct: 627 SGFCNMNMMQEARGVLSEMIGTGITP-DKTAYNCLIRKYQKLGNMEEASSLQNEMESVL 684
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 121/286 (42%), Gaps = 53/286 (18%)
Query: 57 GGSVTGALNAY-IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
G A++A+ ME DM+ + + + + R A E + +S K F D
Sbjct: 226 AGLAAEAVHAFNRMEDYGCTPDMVAFSI-VISSLCKKRRANEAQSFFDSLKHRFE-PDVV 283
Query: 116 VYLDLT---AKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKM 170
VY L + I+ AE+ F+ + + N YTY +++ C+ RA +F +M
Sbjct: 284 VYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEM 343
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY------ 224
+ N V FN+L ++++ G+ EKV + NQMK+ D ++Y ++S+
Sbjct: 344 IDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENL 403
Query: 225 -----------------------------SHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
+ L+D++G R++ M E + TY+
Sbjct: 404 EEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARM-KELNCQPNTLTYNI 462
Query: 256 LASIYVKAELFEKAELALKKLEEM-----KPRDRKAYHFLISLYCN 296
L ++ ++ ++ LK +EM +P + Y LIS++C+
Sbjct: 463 LMRMFAES---RSTDMVLKMKKEMDESQVEP-NVNTYRILISMFCD 504
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 110/254 (43%), Gaps = 8/254 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL---SE 139
+R L K GR+ AL + + K F + +D K+ + A + F + S+
Sbjct: 72 IRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ 131
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
N TY ++N CK+ +RA+ L + M+E N + ++ L + G+ +K
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDID-GVERVFYEMCNECEDKCRWTTYSNLAS 258
L+ +M +R D + Y + +D +E V + + C TY++L
Sbjct: 192 TLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPT--VVTYNSLME 249
Query: 259 IYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPP 316
++ +++ ++A ++ + E P D Y+ +I+ C + LD + ++ + P
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309
Query: 317 TNTSYLVLLQALAK 330
+Y ++ L K
Sbjct: 310 DVITYSTIIDGLCK 323
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 107/270 (39%), Gaps = 11/270 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
V L K GR +++ M R + L+ K+ + A + + S
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
TY +L+ +C+ +RA L + M E + + +N + R + + +
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV-----FYEMCNECEDKCRWTTYSN 255
L+ QM D +TY + +D ++ EM + TY+
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357
Query: 256 LASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KS 312
+ +A ++A L+++ E+ P D ++ +I C + +LDA +++G++ +
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVP-DLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
P +Y L+ L+K +D + FE
Sbjct: 417 ECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 111/274 (40%), Gaps = 43/274 (15%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLN 152
A+EV + M+ + + F + +++ K ++ K FN + N TY AL+N
Sbjct: 66 AVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVN 125
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
+ +E + E+A +FE+M + + A+N L Y R G P+ + + M+
Sbjct: 126 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP 185
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
D +Y + + +Y +A L E AE
Sbjct: 186 DRASYNILVDAYG------------------------------------RAGLHEDAEAV 209
Query: 273 LKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALA 329
++L++ M P K++ L++ + + N V L KS P + +L A A
Sbjct: 210 FEELKQRGMSP-TMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYA 268
Query: 330 KLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
+ +D +++ F E R + D+ +V + AY
Sbjct: 269 RAGRLDDMERLFAAMERRGDA-DVGTYNVAVNAY 301
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 115/277 (41%), Gaps = 7/277 (2%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMD 171
+A+ L + AE + + E+ N Y A L+ K TE+A+ ++++M
Sbjct: 15 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK 74
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+ NT F + +Y + QP + N+MK + TY + +++ +
Sbjct: 75 RERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCE 134
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYHF 289
E VF EM + + Y+ L Y +A L + A ++ M +P DR +Y+
Sbjct: 135 KAEEVFEEM-QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP-DRASYNI 192
Query: 290 LISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRC 348
L+ Y + V+ LK PT S+++LL A A+ ++ +
Sbjct: 193 LVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSG 252
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA 385
+ D + ++ AY + ++ +F ++R +A
Sbjct: 253 LTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDA 289
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 3/220 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL YC RA + +M E N +N L+ EK + +M
Sbjct: 14 TYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRM 73
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ + T+ + + Y +VF EM K TY+ L + + + L
Sbjct: 74 KRERCRANTETFTLMINVYGKAKQPMSSMKVFNEM-KSIGCKPNICTYTALVNAFAREGL 132
Query: 266 FEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLV 323
EKAE +++++ D AY+ L+ Y + ++ +++ P SY +
Sbjct: 133 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNI 192
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
L+ A + + + FEE + R S M+ +++ A+
Sbjct: 193 LVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAH 232
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 132/317 (41%), Gaps = 17/317 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M GK + D++ Y V + K G + AL ++ ME + ++ +D K
Sbjct: 36 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 95
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A+ F+ + E A N +TY +++ +C A L M E + + + FN
Sbjct: 96 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 155
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + ++ G+ + L ++M R I D +TY + + N D + +F M +
Sbjct: 156 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP- 214
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL 300
T++ + +Y +A ++ + ++ L E+ R + Y+ LI +C NL
Sbjct: 215 ----DVVTFNTIIDVYCRA---KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 267
Query: 301 DAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
+A ++ ++ P + +LL + ++ + FE + D ++I
Sbjct: 268 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 327
Query: 360 IRAYLQKDMYEEAALIF 376
I + +EA +F
Sbjct: 328 IHGMCKGSKVDEAWDLF 344
>gi|15218232|ref|NP_175000.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75268143|sp|Q9C545.1|PPR72_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g43010
gi|12321535|gb|AAG50822.1|AC026757_3 hypothetical protein [Arabidopsis thaliana]
gi|12323053|gb|AAG51513.1|AC068324_1 hypothetical protein [Arabidopsis thaliana]
gi|332193817|gb|AEE31938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 257
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 38 FPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALE 97
P N+ L R+ S+ L + +G V L +++L + ALE
Sbjct: 31 LPAANQT-LPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALE 89
Query: 98 VIEWMESRKMHFSYT-DFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCK 156
+WM + ++ D A L L G+ AEK F + E ++ Y LL+ Y K
Sbjct: 90 ASKWMFKHSVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYTK 146
Query: 157 ELMT-ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
+ T ++A A F+KM EL FL FN++ +Y +L + + V L+ ++K+ N+ + +L
Sbjct: 147 PVRTVDKAEATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGSL 206
Query: 216 TYIVWMQSYSHLNDID 231
+ Y+++N ++
Sbjct: 207 KVNNVSRVYANINAME 222
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 5/239 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLG-NTVAFNNLSTMYLRLGQPEKVRPL 201
N TYGAL+N +CK E A L M +L+ +G N + FN + Y R G EK +
Sbjct: 287 NERTYGALINGFCKIGQIEAAEMLLADM-QLRGVGHNQIVFNTMIDGYCRHGMVEKALEI 345
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
M++ I LD TY +N ++ +++ + M E + +Y+ L SI+
Sbjct: 346 KAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA-EKGVAPNYVSYTTLISIHA 404
Query: 262 KAELFEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNT 319
K +A + +E R Y+ +I Y ++ R + K P
Sbjct: 405 KEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIY 464
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+Y L+ +D+ + FEE + R + ++ ++ ++ EEA ++++
Sbjct: 465 TYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDD 523
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 4/161 (2%)
Query: 67 YIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
+IM K V + + Y + K G A + ME + S + V +D K
Sbjct: 382 HIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKN 441
Query: 125 NGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
I AE++ + + + YTY L++ +C + AL LFE+M N VA+
Sbjct: 442 GSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAY 501
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
L + + G+ E+ L + M ++ D+ Y V + S
Sbjct: 502 TALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGS 542
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 128/299 (42%), Gaps = 7/299 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-SEYA 141
+ L K G + A+E+ E M+ + S + + ++L K + A K F+ + S+
Sbjct: 245 IDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKC 304
Query: 142 K-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
K N T+ AL+N + +E + E+A +FE++ E + A+N L Y R G P
Sbjct: 305 KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAE 364
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ + M+ D +Y + + +Y + + VF E+ ++ L S Y
Sbjct: 365 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVF-EVMKRLGITPTMKSHMLLLSAY 423
Query: 261 VKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPT 317
+A K E + ++ + +KP D + +++LY + + V + K +P
Sbjct: 424 SRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPAD 482
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++Y +L+ + +++ F +R D+ I AY ++ Y +F
Sbjct: 483 ISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVF 541
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 140/340 (41%), Gaps = 49/340 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL YC + E+A A+F +M + F + V +N ++ G +K + +M
Sbjct: 205 TYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERM 264
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT--TYSNLASIYVKA 263
K+ TY + + Y + +VF+EM ++ KC+ T++ L + + +
Sbjct: 265 KRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQ---KCKPNICTFTALVNAFARE 321
Query: 264 ELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSY 321
L EKAE ++L+E ++P D AY+ L+ Y ++ FP
Sbjct: 322 GLCEKAEEIFEQLQEAGLEP-DVYAYNALMEAYS---------------RAGFPYGAAEI 365
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
L+Q + C E +SY ++++ AY + ++E+A +F K+
Sbjct: 366 FSLMQHMG----------C----EPDRASY-----NIMVDAYGRAGLHEDAQAVFEVMKR 406
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEE 441
KS + Y R+ + + + E +++ + +P +++ +
Sbjct: 407 LGITPT--MKSHMLLLSAYSRAGK----VAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGR 460
Query: 442 EKDVDGAEEFCKVL-KSLNCLDFSAYSLLIKTYIAAGKLA 480
+ EE + K D S Y++LI Y AG A
Sbjct: 461 LGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFA 500
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 99/234 (42%), Gaps = 5/234 (2%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
YG +++ CK+ T++A L M++ +T +N + + + G + L+N+MK
Sbjct: 181 YGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMK 240
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--NECEDKCRWTTYSNLASIYVKAE 264
Q+NI D +TY + L+ + V +F EM N D C + S + + + +
Sbjct: 241 QKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFN--SVIDGLCKEGK 298
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLV 323
+ + E+ +E+ + Y+ ++ YC + R++ ++ P SY
Sbjct: 299 VEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTA 358
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
L+ + +D Q F E + V++R + E A + F+
Sbjct: 359 LINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFD 412
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 57/309 (18%), Positives = 115/309 (37%), Gaps = 7/309 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ K + D++ Y + L K ++ + M ++ F +D K
Sbjct: 239 MKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGK 298
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ AE+ + E N TY +++ YC RA +F+ M + + +++
Sbjct: 299 VEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTA 358
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L Y+ + +K L ++ Q + +T V ++ + + ++F++
Sbjct: 359 LINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTE-CAKIFFDEMQAA 417
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAV 303
T+ L Y K L E+A KLE + + + Y +I+ C LD
Sbjct: 418 GHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKA 477
Query: 304 NRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
+ + L P +Y ++ + +D K + E D R +VI+R
Sbjct: 478 HATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRG 537
Query: 363 YLQKDMYEE 371
+ + E
Sbjct: 538 FFRSSKVSE 546
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 70/402 (17%), Positives = 152/402 (37%), Gaps = 49/402 (12%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
L K G + A +++ ME + + +D K + A N + +
Sbjct: 187 GLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPP 246
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ TY +L++ K E+ LF +M L + FN++ + G+ E ++
Sbjct: 247 DIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIM 306
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M ++ + + +TY V M Y + R+F M +
Sbjct: 307 TYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMID-------------------- 346
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSY 321
K +E D +Y LI+ Y +D +++ I ++ P+ +
Sbjct: 347 -----------KGIEP----DIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTC 391
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
VLL+ L ++ + K F+E ++ ++ ++ Y + + EEA F+ ++
Sbjct: 392 SVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLER 451
Query: 382 RANASARFFKSRESFMIYYLRSRQL--DLALNEMEAALSEAKQFHWRPMQVTVDTFFRFF 439
R + + IY L + L++ A + P +T +
Sbjct: 452 R--------REDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY 503
Query: 440 EEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKLA 480
+E +D A++ + ++ CL D Y+++++ + + K++
Sbjct: 504 CQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVS 545
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 113/251 (45%), Gaps = 10/251 (3%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L++ YC+ A+ L E+M+ + +N + G+ ++V L+++M
Sbjct: 288 TYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEM 347
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
R + D++T + SY+ D+ +V M E + TY L + KA+
Sbjct: 348 DGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMM-ESGLQLDQFTYKALIHGFCKAKE 406
Query: 266 FEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTS 320
++A+ AL EM R + + +L+ +C +N DAV + ++K PP +
Sbjct: 407 LDEAKEALF---EMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRGLPPDKSV 463
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-A 379
Y L++ L K +D+ ++ + + + D + + A+L A+ I N A
Sbjct: 464 YRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAASDILNEMA 523
Query: 380 KKRANASARFF 390
+K+ + + + +
Sbjct: 524 RKQMSVTPQIY 534
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 116/336 (34%), Gaps = 46/336 (13%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN--GLSEYAKNRYTY 147
R A V + M +R + L A+ A A K FN G + A N + Y
Sbjct: 125 ARPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVY 184
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG------------QP 195
A+L+ K RA L +MD + +FN + +Y+R G Q
Sbjct: 185 NAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQD 244
Query: 196 EKVRP-----------------------LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
E V P L M + D +TY + Y + D+
Sbjct: 245 EGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGE 304
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHF--- 289
++ EM E + +I K K + L EM R +A H
Sbjct: 305 AVKLREEM----EAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCN 360
Query: 290 -LISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI+ Y ++ + +V +++S +Y L+ K +D K+ E R
Sbjct: 361 TLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGR 420
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
S + + ++ + +K+ + LI + KR
Sbjct: 421 GFSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRG 456
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG--IAAAEKYFNGLSEY 140
V L R+ AL EW+++R + + + L NG + +EK ++
Sbjct: 113 VTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGR 172
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ YT+ L+NC + E AL FE+M + + V +N++ MY R+G+ +
Sbjct: 173 GIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEA 232
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
L ++K N LD +TY Y+ D + ++ EM
Sbjct: 233 VELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEM 274
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 124/349 (35%), Gaps = 49/349 (14%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y NRYTY +L E + L E+M + F+ L R QPE+
Sbjct: 139 YEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEAL 198
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDI-DGVERVFYEMCNECEDKCRWTTYSNLAS 258
+MK I D +TY + Y + + + VE YE K TY +A+
Sbjct: 199 KWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVE--LYEKLKSVNWKLDTVTYGAIAN 256
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
+Y +A ++ ++ ++EM+ S P
Sbjct: 257 VYARAGDYQSI---IQLVQEMR------------------------------DSGSSPNA 283
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
L+ L+K ++ K+ F E + S +++ Y + Y++A ++
Sbjct: 284 VIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYET 343
Query: 379 AKKRA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
K + S + R Q + L EM K+ P +T T
Sbjct: 344 LKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEM-------KRAGCNPDHLTYRTAMN 396
Query: 438 FFEEEKDVDGAEE-FCKVLKSLNCLDFSAYSLLIKTYIAAGKLASDMRQ 485
+ + VD A F KV+ D ++++I+ A KLA ++ Q
Sbjct: 397 TYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIR----ACKLAGEIEQ 441
>gi|147840633|emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 131/331 (39%), Gaps = 43/331 (12%)
Query: 64 LNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAK 123
+ ++ + K ++ L +RS G ++HAL ME S F L +
Sbjct: 96 IESHKNDPKITQEPYLSTLIRSYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQ 155
Query: 124 TNGIAAAEKYFNGLSE---YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
+ K+F + ++ +YG L+ YC+ ++++A+++ ++M+E V
Sbjct: 156 SKLFDQVPKFFEEIPRRYGIXPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAV 215
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
F + + GQ ++ + ++M ++ LD Y V + ++H D + V+ + EM
Sbjct: 216 TFTTILDALYKQGQSDRAEKVWHEMAKKGC-LDVGAYNVKIM-FAHGGDPENVKALIDEM 273
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL 300
N +KP D +Y++L++ YC + +
Sbjct: 274 SNAG----------------------------------LKP-DTISYNYLMTSYCKSGMM 298
Query: 301 DAVNRVWGILKSTF-PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
D +V+ L+ T P ++ L+ L + + + F++ R D +
Sbjct: 299 DEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHL 358
Query: 360 IRAYLQKDMYEEAALIFNNAKKRANASARFF 390
+ +QK +EA + KK N A F
Sbjct: 359 VEGLVQKKKTKEAKGLIRTVKK--NFPANFL 387
>gi|302781402|ref|XP_002972475.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
gi|300159942|gb|EFJ26561.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
Length = 406
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 9/226 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ +TY AL+N +CK + TE L L E+M N FN + + R G+ E+V L
Sbjct: 116 DEFTYAALINGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALF 175
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+M + D +Y V +++++ ID F + + E+ Y+ L + K
Sbjct: 176 ERMVEHECRPDPKSYRVLVEAFAVSGRIDEAFG-FVQRYADSENAPHLGAYNTLMNRLGK 234
Query: 263 AELFEKAELALKKLEEMKPR-----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT 317
A KA AL+ ++K R D Y+ LI L +D + ++ F P
Sbjct: 235 A---NKAHAALEIFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQKMRLHFQPD 291
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
SY LL L + +D+ ++ D +++ Y
Sbjct: 292 IFSYNTLLGRLGRAGRVDLFASVLDDMSRDGVQQDRITYAILVEGY 337
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 137/354 (38%), Gaps = 50/354 (14%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G+ + D+L Y + L K G A+ + ME R + ++ +D K
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A F+ + + N +TY +L++ C + A+ LF M K + + + FN
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE- 243
L + G K +V+ M Q ++ D +TY M + +++ VF M +
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG 329
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSN 299
C +Y+ L + Y K ++ +K A+ EEM + D Y+ LI C+
Sbjct: 330 CVPSV--ISYTTLINGYCKIQIMDK---AMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGR 384
Query: 300 L-DAVNR-----VWG------------------------------ILKSTFPPTNTSYLV 323
L DA+ V+G I + P Y +
Sbjct: 385 LRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSI 444
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
++ + + ++ + F + S+ D+R ++I Q+ + EA+ +F
Sbjct: 445 VMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFG 498
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/308 (19%), Positives = 121/308 (39%), Gaps = 11/308 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ L G ++ A+ + M RK+ F +D K + A + + S+
Sbjct: 236 IHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDL 295
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY +L++ +C + + +F+ M + + +++ L Y ++ +K
Sbjct: 296 KPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMG 355
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--NECEDKCRWTTYSNLAS 258
L +M Q+ + D +TY + H+ + +F+EM + D TY L
Sbjct: 356 LFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPD---LVTYRILFD 412
Query: 259 IYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFP 315
K +A + LK +E + P D Y ++ C L+A ++ L S
Sbjct: 413 YLCKNHRLAEAMVLLKVIEGTNLDP-DIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLH 471
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P +Y +++ L + + + F E + S + ++I R +L+ + A +
Sbjct: 472 PDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQL 531
Query: 376 FNNAKKRA 383
F R
Sbjct: 532 FQEMLSRG 539
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 5/218 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y L+N YCK + ++A+ LFE+M + + +TV +N L +G+ L ++M
Sbjct: 336 SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 395
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
D +TY + Y N V ++ YS + +A
Sbjct: 396 VVYGQIPDLVTYRILFD-YLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 454
Query: 266 FEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYL 322
E A KL + P D + Y +I+ C L ++++G + ++ P +Y
Sbjct: 455 LEAARDLFSKLSSKGLHP-DVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYN 513
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
++ + + N Q F+E SR S D+ +++
Sbjct: 514 LITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLV 551
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
L K R A+ +++ +E + +++ +D + + AA F+ LS +
Sbjct: 414 LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 473
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY ++N C++ + A LF +MDE N +N ++ +LR + + L
Sbjct: 474 VRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQ 533
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+M R S+D T + ++ S DG+++
Sbjct: 534 EMLSRGFSIDVSTTTLLVEMLSD----DGLDQ 561
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 135/328 (41%), Gaps = 7/328 (2%)
Query: 67 YIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT 124
Y M + + D+L Y + + G A ++ M + + F ++ K
Sbjct: 818 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 877
Query: 125 NGIAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
+ A + N + + + N TY L++ CKE + A L +M ++ N +
Sbjct: 878 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 937
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N++ + G E+ LV + + ++ D +TY M +Y ++D + + EM
Sbjct: 938 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 997
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALK-KLEEMKPRDRKAYHFLISLYCNTSNLD 301
+ T++ L + + + E E L L + + ++ L+ YC +NL
Sbjct: 998 KGLQPTI-VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 1056
Query: 302 AVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
A ++ + S P +Y L++ K + F+E + + S + V+I
Sbjct: 1057 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116
Query: 361 RAYLQKDMYEEAALIFNNAKKRANASAR 388
+ +L++ + EA +F+ ++ A+ +
Sbjct: 1117 KGFLKRKKFLEAREVFDQMRREGLAADK 1144
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 5/237 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N Y YG+++ C+ A F +M L +TV + L + + G
Sbjct: 758 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 817
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASIYV 261
+M R+I+ D LTY + + + D+ ++F+EM C E T++ L + Y
Sbjct: 818 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS--VTFTELINGYC 875
Query: 262 KAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNT 319
KA + A + ++ + Y LI C +LD+ N + + K P
Sbjct: 876 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y ++ L K I+ + E+E+ + D ++ AY + ++A I
Sbjct: 936 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992
>gi|449479164|ref|XP_004155523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 201
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 291 ISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
++LY N D V RVW + + N+ YL ++ +L KL+ ID ++ +EWES +S
Sbjct: 1 MTLYAAIGNKDEVYRVWNLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDTS 60
Query: 351 YDMRLADVIIRAYLQKDMYEEAA-----LIFNNAKKRANASARFFKSRESFMIYYLRSRQ 405
+D ++ +++I +Y K ++A LI N + RA A R Y +
Sbjct: 61 FDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASG-------YHSNGL 113
Query: 406 LDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL 455
+ A ++ A+S + W+P + + + +V+ AEE +L
Sbjct: 114 TNKAAETLKKAISVSPP-RWKPNYDILAACLEYLKTNGNVELAEEIIGLL 162
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 36/224 (16%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMD 171
+ L + +K N + A+ F ++ + + AL++ +C + A L + MD
Sbjct: 434 YTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMD 493
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+K + V FN + + R G+ E+ R L ++MK+R I D++++ + YS DI
Sbjct: 494 RMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIK 553
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLI 291
RV EM + + TY+ L K ++ +LA + L+EM
Sbjct: 554 DAFRVRNEMLDTGFNPTVL-TYNALVQGLCKN---QEGDLAEELLKEM------------ 597
Query: 292 SLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAID 335
+ P +T+Y L++ +AK+N D
Sbjct: 598 ------------------VSKGMTPDDTTYFTLIEGIAKVNIPD 623
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 127/310 (40%), Gaps = 42/310 (13%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMD 171
F + +++ K + A+ + + S N TY +++ YC E A A+ M
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
K ++ + +L + + G+ E+ + +M Q+ + + Y + + + ++D
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHF 289
EM + +TY++L + ++AE +K+++E + P D Y+
Sbjct: 344 MASAYKDEMLKKGISPT-MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP-DAITYNI 401
Query: 290 LISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEEW 344
LI+ YC +N + +L S PT +Y LL L+K N A D+ K+ E
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
Query: 345 ------------ESRCSSYDMRLA-------------------DVIIRAYLQKDMYEEAA 373
+ CS+ +++ A + I++ + ++ EEA
Sbjct: 462 VLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521
Query: 374 LIFNNAKKRA 383
+F+ K+R
Sbjct: 522 ELFDEMKRRG 531
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 9/223 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T +LL+ + K TE A L+ +M L+ + FN + + + G+ +K + V M
Sbjct: 188 TCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM 247
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + + +TY + Y ++ + + M + + +T Y +L S K
Sbjct: 248 ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFT-YGSLISGMCKQGR 306
Query: 266 FEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTS 320
E+A K EEM + + Y+ LI +CN NLD + +LK PT ++
Sbjct: 307 LEEAS---KIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
Y L+ AL D + +E + + S D +++I Y
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/335 (17%), Positives = 135/335 (40%), Gaps = 42/335 (12%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ L K G+ + A + + ME+ + + + + + + AA+ + +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ------ 194
+ +TYG+L++ CK+ E A +FE+M + + V +N L + G
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 195 ------PEKVRP-----------------------LVNQMKQRNISLDNLTYIVWMQSYS 225
+ + P ++ +++++ IS D +TY + + Y
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYC 407
Query: 226 HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRD 283
+ + EM K TY++L + K ++A+ KK+ E + P D
Sbjct: 408 RCANAKKAFLLHDEMLAS-GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLP-D 465
Query: 284 RKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
++ LI +C+ SN+ A + + + PP ++ ++Q + ++ ++ F+
Sbjct: 466 VIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFD 525
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
E + R D + +I Y ++ ++A + N
Sbjct: 526 EMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 119/324 (36%), Gaps = 40/324 (12%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ + + D Y + + K GR A ++ E M + + S + +D
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A Y + + + TY +L++ E T+ A + +++ E + + +N
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM---- 240
L Y R +K L ++M I TY + S N + + +F ++
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
Query: 241 ---------------CNECEDKCRWTTYSNLASIYVKAELFE------------KAELAL 273
C+ K + ++ + V + K E A
Sbjct: 462 VLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521
Query: 274 KKLEEMKPRDRKAYHF----LISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQAL 328
+ +EMK R K H LIS Y ++ RV +L + F PT +Y L+Q L
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581
Query: 329 AKLNAIDILKQCFEEWESRCSSYD 352
K D+ ++ +E S+ + D
Sbjct: 582 CKNQEGDLAEELLKEMVSKGMTPD 605
>gi|302798915|ref|XP_002981217.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
gi|300151271|gb|EFJ17918.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
Length = 541
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 181/457 (39%), Gaps = 67/457 (14%)
Query: 35 PTPFPTG----NEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFG 90
P P +G + D ++K+ A + + AL + EG V +D++ + L
Sbjct: 98 PIPPSSGTLQSHIDAIWKK--AEPSNYRDIVAALKDWQSEGNLVTRDVIYKLIIRLHARM 155
Query: 91 RYRHALEVIEWMESRKMHFSYTDF--AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYG 148
Y ++++ W+ K F TDF V +D + + FN + + K Y
Sbjct: 156 FYFQGMKLMNWVIVEK-PFQLTDFDHLVRMDFHTRELKVDKVLTCFNRIQD--KTETCYV 212
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
LL + ERAL + ++M EL + N+ ++N + MYLR+G ++ + + ++K +
Sbjct: 213 LLLQAFATAHRKERALDVLKQMKELVLITNSYSYNLVIAMYLRMGLIDEAKEMFAELKDK 272
Query: 209 -NISLDNLTYIVWMQSYSHL--NDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
N++ D TY+ ++S L +D++ F+ ++ W
Sbjct: 273 SNVAPDAFTYLNLLKSRDALGMDDLEDTIEEFFLDVDKIPTGFEWRN------------- 319
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLL 325
LI LY V R+W K SY L
Sbjct: 320 ------------------------LIRLYGAMGKKKDVERLWREQKRVAEYMPESY--FL 353
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLAD----VIIRAYLQKDMYEEAALIFNNAKK 381
A+ +KQ FEE + + + +L++ +++ Y + +A AKK
Sbjct: 354 AAIESFGMNGEMKQ-FEEICKQLEAQNQKLSERQCFTMLKVYCMNGLMNDAE---RTAKK 409
Query: 382 RANASARF-FKSRESFMIYYLRSRQLDLALNEMEAALSE--AKQFHWRPMQVTVDTFFRF 438
+ FK + Y+ Q A + A + AK F P+ VTV T
Sbjct: 410 MEELRYKLGFKGYHYLVSGYVNRHQFVKATEKFSEAEEKGLAKGFK-NPLFVTVLTLLEA 468
Query: 439 FEEEKDVDGAEEFC-KVLKSLN-CLDFSAYSLLIKTY 473
+ +K+++ AEE KVLK+ + D ++ L+K Y
Sbjct: 469 YAGKKELEKAEEMVEKVLKTKHYPYDIRLFNALLKVY 505
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLG---NTVAFNNLSTMYLRLGQPEKVR 199
N TY +++ Y K + AL +F +E+KFLG + V++N L ++Y +LG+ E+
Sbjct: 365 NVVTYSTMIDGYAKVGRLDDALNMF---NEMKFLGVGLDRVSYNTLLSVYAKLGRFEQAL 421
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+ +M+ I D +TY + Y D V RVF EM TYS L +
Sbjct: 422 DVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEM-KRGRVSPNLLTYSTLIDV 480
Query: 260 YVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
Y K L+++A ++ ++ + D Y LI C ++ +V + + K P
Sbjct: 481 YSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPN 540
Query: 318 NTSYLVLLQALAK 330
+Y ++ A +
Sbjct: 541 VVTYNSIIDAFGR 553
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 125/318 (39%), Gaps = 47/318 (14%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI--A 128
GKTV + + + G A++V + M+S + + + +D K G+
Sbjct: 222 GKTVYA--FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGK-GGVEFK 278
Query: 129 AAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
+ F+G+ + +R T+ +LL + + E A LF M + + +N L
Sbjct: 279 KVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLL 338
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNEC 244
+ GQ + ++++M +NI + +TY + Y+ + +D +F EM
Sbjct: 339 DAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVG 398
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAV 303
D+ +Y+ L S+Y K FE+A K++E R D Y+ L++ Y D V
Sbjct: 399 LDR---VSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEV 455
Query: 304 NRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
RV FEE + S ++ +I Y
Sbjct: 456 RRV----------------------------------FEEMKRGRVSPNLLTYSTLIDVY 481
Query: 364 LQKDMYEEAALIFNNAKK 381
+ +Y+EA +F K+
Sbjct: 482 SKGGLYKEAMEVFREFKQ 499
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + + A+ FE M + + V +N + R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSREISPDVVTYNTMINGCYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ ++ +MK +NI +TY ++ Y ++ + R+ EM K TY
Sbjct: 200 KMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGYG-IKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L A +A+ LK++ + + P+D + LIS C NLDA V ++
Sbjct: 259 STLLPGLCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLDAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKAGQHD 343
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 129/326 (39%), Gaps = 52/326 (15%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ + +R D + Y + L K A +++ ME + S F +D +
Sbjct: 396 MKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQ 455
Query: 127 IAAAEKYFNGLSE-----YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ EK F LS+ N ++G+++ +CK A+A+ + M + N
Sbjct: 456 L---EKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQV 512
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
+N++ Y+ G E+ LV +MK +S TY + ++ + ID E + Y +
Sbjct: 513 YNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLT 572
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD 301
N + ++P D +Y+ +IS CN + D
Sbjct: 573 N----------------------------------QGLRP-DVVSYNTIISACCNKGDTD 597
Query: 302 -AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW-----ESRCSSYDMRL 355
A+ + + K PT +Y LL AL + ++ ++ E S Y R
Sbjct: 598 RALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRC 657
Query: 356 ADVIIRAYLQKDMYEEAALIFNNAKK 381
+ A L+K+M E+ + F++ ++
Sbjct: 658 ENESKVASLKKEMSEK-GIAFDDTER 682
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 1/134 (0%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YT LLN CK+ +A + E + + T +N L Y ++ + + Q
Sbjct: 336 YTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQ 395
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK R+I D++TY + + I E + EM D T++ L Y +A
Sbjct: 396 MKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDP-SVETFNTLIDAYGRAG 454
Query: 265 LFEKAELALKKLEE 278
EK L +++
Sbjct: 455 QLEKCFTVLSDMQD 468
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY ALL CK + ALA+ +M K NT +N L + R G + L+ Q
Sbjct: 675 YTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQ 734
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MKQ + D TY ++ + D+ + EM K TY+ L + +A
Sbjct: 735 MKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEM-EVVGVKPNIKTYTTLIHGWARAS 793
Query: 265 LFEKAELALKKLEEMKP----RDRKAYHFLIS 292
L EK ALK +EMK D+ YH L++
Sbjct: 794 LPEK---ALKCFQEMKSAGLKPDKAVYHCLMT 822
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 141/368 (38%), Gaps = 32/368 (8%)
Query: 41 GNEDK---LYKRLSALGATG---------------GSVTGALN-AYIMEGKTVRKDMLEY 81
GNE+K ++ RL G T G V+ AL + +ME ++ +M Y
Sbjct: 443 GNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTY 502
Query: 82 C--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
+ + + +A V E + + D +Y ++ G+ ++ + E
Sbjct: 503 SMLINGFVRLKDWANAFAVFEDVVKDGLK---PDVVLYNNIIRAFCGMGNMDRAIRTVKE 559
Query: 140 YAKNRY-----TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
K R+ T+ +++ + + RAL +F+ M + FN L + Q
Sbjct: 560 MQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQ 619
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
EK ++++M IS + TY M Y+ L D F ++ E + + TY
Sbjct: 620 MEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVY-TYE 678
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNL-DAVNRVWGILKS 312
L K+ + A +++ K PR+ Y+ LI + ++ +A + + +
Sbjct: 679 ALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQE 738
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y + A K + + +E E +++ +I + + + E+A
Sbjct: 739 GVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKA 798
Query: 373 ALIFNNAK 380
F K
Sbjct: 799 LKCFQEMK 806
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+L+ C +S GR + AL V M S+K+ + + + +D A+ + A + +
Sbjct: 680 LLKACCKS----GRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQM 735
Query: 138 SEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
+ + +TY + +N CK +RA ++M+ + N + L + R P
Sbjct: 736 KQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLP 795
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQS 223
EK +MK + D Y M S
Sbjct: 796 EKALKCFQEMKSAGLKPDKAVYHCLMTS 823
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R +G ++ Y + A FE M + + +L Y E+ V
Sbjct: 288 SRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCV 347
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT-----YSNLA 257
+MK+ I + +TY + + ++ + D + + F E K R TT Y N+
Sbjct: 348 RKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEA------KERHTTLNAIIYGNII 401
Query: 258 SIYVKAELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-T 313
+ +A +AE ++++EE P D YH ++ Y N + V+ LK
Sbjct: 402 YAHCQACNMTQAEALVREMEEEGIDAPID--IYHTMMDGYTIIGNEEKCLIVFDRLKECG 459
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
F P+ SY L+ K+ + + + E ++M+ ++I +++ + A
Sbjct: 460 FTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAF 519
Query: 374 LIFNNAKK 381
+F + K
Sbjct: 520 AVFEDVVK 527
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 149/365 (40%), Gaps = 19/365 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ L K G A+ ++ ME + +D K + A F+ +
Sbjct: 177 INGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGI 236
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ + +TY +L++ C + L +M K L + V F+ + + G+ +
Sbjct: 237 SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHE 296
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLAS 258
+V+ M QR + D +TY M + +++D +VF M + D +Y+ L +
Sbjct: 297 IVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV---ISYTTLIN 353
Query: 259 IYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFP 315
Y K +KA +++ +E P D K Y+ L+ C+ L DA+ ++
Sbjct: 354 GYCKIHKIDKAMYLFEEMCRKEWIP-DTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM 412
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P +Y +LL +L K ++ + E+ + D+++ ++II + E A +
Sbjct: 413 PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 472
Query: 376 FNN-AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
F+N + K + S + + MI+ L R L LNE E P T +T
Sbjct: 473 FSNLSSKGLHPSVWTY----NIMIHGLCKRGL---LNEANKLFMEMDGNDCSPDGCTYNT 525
Query: 435 FFRFF 439
R F
Sbjct: 526 IARGF 530
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 5/207 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N TYG L+N CK T A+ L M++ + V + ++ + Q +
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLA 257
L +QM + IS D TY + + +L + V + +M N D ++T +
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD-- 283
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPP 316
++ + ++ E E+ ++ D Y L+ +C S +D +V+ ++ + F P
Sbjct: 284 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 343
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEE 343
SY L+ K++ ID FEE
Sbjct: 344 DVISYTTLINGYCKIHKIDKAMYLFEE 370
>gi|168039319|ref|XP_001772145.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676476|gb|EDQ62958.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 13/256 (5%)
Query: 97 EVIEWMESR-KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNC 153
+V W +S+ + + ++A + + N A F+ + + K +Y AL++
Sbjct: 1 QVFNWKKSKLRWEVNPKEYAKMISFAGRINQPQLAADLFDEMEKRGIKKTAVSYNALIHS 60
Query: 154 YCKELMTERALALFEKMD-ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
Y + ++AL LFE M + V +N L +MY R+G E+++ + +
Sbjct: 61 YGRNNEPQKALQLFEYMKVTVDCQPTLVTYNTLISMYSRMGATEEMKKIFLDCTEAEFVP 120
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK---CRWTTYSNLASIYVKAELFEKA 269
D TY + Y ++ +E F NE + K TY+ L Y +A +K
Sbjct: 121 DRHTYNALIWGYMRAGQLNEMEVTF----NELQAKKFNADVITYNALIIGYARANAVDKM 176
Query: 270 ELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQA 327
E+ L ++ + P + A H LI Y D + + ++K + + +Y +L+
Sbjct: 177 EVVLSSMQAVGIPINTMALHALIMAYSRAGTYDRLAKTMEVVKDAGWMLQPATYNILISE 236
Query: 328 LAKLNAIDILKQCFEE 343
K+ +D ++Q F E
Sbjct: 237 YGKVGYLDKMEQAFRE 252
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 110/250 (44%), Gaps = 9/250 (3%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWME-SRKMHFSYTDFAVYLDLTAKTN 125
ME + ++K + Y + S + + AL++ E+M+ + + + + + ++
Sbjct: 42 MEKRGIKKTAVSYNALIHSYGRNNEPQKALQLFEYMKVTVDCQPTLVTYNTLISMYSRMG 101
Query: 126 GIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
+K F +E + +R+TY AL+ Y + F ++ KF + + +N
Sbjct: 102 ATEEMKKIFLDCTEAEFVPDRHTYNALIWGYMRAGQLNEMEVTFNELQAKKFNADVITYN 161
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
L Y R +K+ +++ M+ I ++ + + +YS D + + E+ +
Sbjct: 162 ALIIGYARANAVDKMEVVLSSMQAVGIPINTMALHALIMAYSRAGTYDRLAKTM-EVVKD 220
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLD 301
+ TY+ L S Y K +K E A +++ +KP + + ++I+ Y N
Sbjct: 221 AGWMLQPATYNILISEYGKVGYLDKMEQAFREMMNASVKP-SFETFQYMINAYEAADNET 279
Query: 302 AVNRVWGILK 311
V+R+ +++
Sbjct: 280 QVDRILDLMR 289
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN----LTYI 218
A LF++M++ V++N L Y R +P+K L MK +++D +TY
Sbjct: 35 AADLFDEMEKRGIKKTAVSYNALIHSYGRNNEPQKALQLFEYMK---VTVDCQPTLVTYN 91
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
+ YS + + ++++F + C E E TY+ L Y++A + E+ +L+
Sbjct: 92 TLISMYSRMGATEEMKKIFLD-CTEAEFVPDRHTYNALIWGYMRAGQLNEMEVTFNELQA 150
Query: 279 MK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYL-VLLQALAKLNAIDI 336
K D Y+ LI Y + +D + V +++ P NT L L+ A ++ D
Sbjct: 151 KKFNADVITYNALIIGYARANAVDKMEVVLSSMQAVGIPINTMALHALIMAYSRAGTYDR 210
Query: 337 LKQCFE-----EWESRCSSYDMRLADVIIRAYLQK 366
L + E W + ++Y++ +++ YL K
Sbjct: 211 LAKTMEVVKDAGWMLQPATYNILISEYGKVGYLDK 245
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 12/212 (5%)
Query: 169 KMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN 228
K +L++ N + + + R+ QP+ L ++M++R I ++Y + SY N
Sbjct: 6 KKSKLRWEVNPKEYAKMISFAGRINQPQLAADLFDEMEKRGIKKTAVSYNALIHSYGRNN 65
Query: 229 DIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL------EEMKPR 282
+ ++F M + + TY+ L S+Y + E+ +KK+ E P
Sbjct: 66 EPQKALQLFEYMKVTVDCQPTLVTYNTLISMYSRMGATEE----MKKIFLDCTEAEFVP- 120
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCF 341
DR Y+ LI Y L+ + + L++ F +Y L+ A+ NA+D ++
Sbjct: 121 DRHTYNALIWGYMRAGQLNEMEVTFNELQAKKFNADVITYNALIIGYARANAVDKMEVVL 180
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
++ + +I AY + Y+ A
Sbjct: 181 SSMQAVGIPINTMALHALIMAYSRAGTYDRLA 212
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 7/261 (2%)
Query: 75 RKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEK 132
+ + L YC V++L + G+ A I M K+ + V +D K I+ A +
Sbjct: 32 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 91
Query: 133 YFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
+F + E + TY LL CK +A +LF M+ + V + L ++ ++
Sbjct: 92 FFETMPE--PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKM 149
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWT 251
Q E L+ M R S +Y + +D ++F EM C+ R T
Sbjct: 150 CQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPD-RVT 208
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGIL 310
+ + + VK L E +L +E D+ + LI C T + +A G+
Sbjct: 209 YNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMA 268
Query: 311 KSTFPPTNTSYLVLLQALAKL 331
K P ++ VL+ L L
Sbjct: 269 KQGCAPDLVTHTVLVSKLCIL 289
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 128/299 (42%), Gaps = 7/299 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-SEYA 141
+ L K G + A+E+ E M+ + S + + ++L K + A K F+ + S+
Sbjct: 283 IDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKC 342
Query: 142 K-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
K N T+ AL+N + +E + E+A +FE++ E + A+N L Y R G P
Sbjct: 343 KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAE 402
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ + M+ D +Y + + +Y + + VF E+ ++ L S Y
Sbjct: 403 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVF-EVMKRLGITPTMKSHMLLLSAY 461
Query: 261 VKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPT 317
+A K E + ++ + +KP D + +++LY + + V + K +P
Sbjct: 462 SRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPAD 520
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++Y +L+ + +++ F +R D+ I AY ++ Y +F
Sbjct: 521 ISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVF 579
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 140/340 (41%), Gaps = 49/340 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL YC + E+A A+F +M + F + V +N ++ G +K + +M
Sbjct: 243 TYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERM 302
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR--WTTYSNLASIYVKA 263
K+ TY + + Y + +VF+EM ++ KC+ T++ L + + +
Sbjct: 303 KRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQ---KCKPNICTFTALVNAFARE 359
Query: 264 ELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSY 321
L EKAE ++L+E ++P D AY+ L+ Y ++ FP
Sbjct: 360 GLCEKAEEIFEQLQEAGLEP-DVYAYNALMEAYS---------------RAGFPYGAAEI 403
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
L+Q + C E +SY ++++ AY + ++E+A +F K+
Sbjct: 404 FSLMQHMG----------C----EPDRASY-----NIMVDAYGRAGLHEDAQAVFEVMKR 444
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEE 441
KS + Y R+ + + + E +++ + +P +++ +
Sbjct: 445 LGITPT--MKSHMLLLSAYSRAGK----VAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGR 498
Query: 442 EKDVDGAEEFCKVL-KSLNCLDFSAYSLLIKTYIAAGKLA 480
+ EE + K D S Y++LI Y AG A
Sbjct: 499 LGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFA 538
>gi|224130012|ref|XP_002320730.1| predicted protein [Populus trichocarpa]
gi|222861503|gb|EEE99045.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHAL--EVIEW-MESRKMHFSYTDF 114
GS+ G L+A++ K RKD L L++ + H L EV+E + + D+
Sbjct: 116 GSLRGLLSAWVKIMKPRRKDWLSI----LKELNKMEHPLYLEVVEIALLEESFEANVRDY 171
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
+ N + AE+ + E + ++ T A+++ Y K A FE E
Sbjct: 172 TKIIHFYGMNNQLEEAERTRLAMEERGFVSDQVTLTAMIHMYSKGGNLTLAEETFE---E 228
Query: 173 LKFLGNTV---AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
LK LG + ++ ++ Y+R G PEK ++ +M + I + Y +++YS + D
Sbjct: 229 LKLLGQPLDRRSYGSMIMAYIRAGMPEKGEMILREMDAQEIRAGSEVYKALLRAYSIIGD 288
Query: 230 IDGVERVF 237
DG +RVF
Sbjct: 289 ADGAQRVF 296
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 18/310 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ +L + G+ A V + + + F+ + ++ A K F + +Y
Sbjct: 84 ISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGL 143
Query: 142 -KNRYTYGALLN-CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
N TY A+++ C + +R L +F++M + + FN+L + + G E R
Sbjct: 144 KPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAAR 203
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK---CRWTTYSNL 256
L +M R I D TY + + +D + +E+ +E K TYS +
Sbjct: 204 SLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLD----MAFEIMSEMPAKNILPNVVTYSTM 259
Query: 257 ASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLD-AVNRVWGILK 311
Y KA + A EMK DR +Y+ L+S+Y + A++ +
Sbjct: 260 IDGYAKAGRLDDAR---NLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMEN 316
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
S +Y LL K D++++ FEE ++R S ++ +I Y + +Y E
Sbjct: 317 SGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYRE 376
Query: 372 AALIFNNAKK 381
A +F KK
Sbjct: 377 AMDVFREFKK 386
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + + +D+ Y + ++ K G+ A E++ M ++ + + ++ +D AK
Sbjct: 209 MVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGR 268
Query: 127 IAAAEKYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A FN + + +R +Y LL+ Y K E A+ + +M+ + V +N
Sbjct: 269 LDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNA 328
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
L Y + + + VR + +MK R++S + LTY + YS
Sbjct: 329 LLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYS 369
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 132/347 (38%), Gaps = 23/347 (6%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY L++ CK M A + +KM E F N + FN+L + + G + R L+
Sbjct: 213 NLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLL 272
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT-----TYSNLA 257
M + + + +TY + + V EM K R TYS L
Sbjct: 273 GIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM------KTRGVTPDAFTYSALI 326
Query: 258 SIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFP 315
KA+ E+AE L+++ D Y +I +C + L+A + + K
Sbjct: 327 HGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS 386
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P +Y ++ L KL I + E+ ES D+ +I + DM EA
Sbjct: 387 PDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQK 446
Query: 375 IFNN-AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVD 433
+ + K N + + + R L E E L K+ P VT
Sbjct: 447 LLDRMCKAGCNPDVVTYTTIIDGLCKCGR-------LEEAEYLLQGMKRAGCAPNVVTYT 499
Query: 434 TFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
T + + VD AE + +++ C + Y+ ++ +G++
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 5/179 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G D++ Y + + K G+ A + ++ M ++ + +D K
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 404
Query: 127 IAAAEKYFNGLSEYA---KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
IA A+ + E + TY ++N CK M A L ++M + + V +
Sbjct: 405 IAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYT 464
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
+ + G+ E+ L+ MK+ + + +TY + +D ERV EM N
Sbjct: 465 TIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 523
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 119/308 (38%), Gaps = 54/308 (17%)
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ ++N + + + G L+ +MK + D T+ + + ++ D+DG
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL 170
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISL 293
M C+ TY+ L + + +A +K E A+K LEEM+ P + Y+ L+
Sbjct: 171 RSM--GCDPN--VVTYTALIAAFARA---KKLEEAMKLLEEMRERGCPPNLVTYNVLVDA 223
Query: 294 YCNTSNLDAV-NRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
C S + A + V +++ F P ++ L+ K +D ++R
Sbjct: 224 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVD---------DAR----- 269
Query: 353 MRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNE 412
+L +++ ++ ++ +ALI K S +F +++E
Sbjct: 270 -KLLGIMVAKGMRPNVVTYSALIDGLCK-----SQKFLEAKE------------------ 305
Query: 413 MEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIK 471
L E K P T + ++ AE+ + + C D YS +I
Sbjct: 306 ---VLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 362
Query: 472 TYIAAGKL 479
+ +GKL
Sbjct: 363 AFCKSGKL 370
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTY 147
G + A + + M S+ + + + + + +K N + AA+ F + + + +
Sbjct: 425 GNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
AL++ +C +RA AL ++MD+ + + V +N L R G+ E+ R L+ +MK+
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKR 544
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
R I D+++Y + YS DI+ + EM
Sbjct: 545 RGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 150/373 (40%), Gaps = 47/373 (12%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ A+L+ + K TE L+ +M LK FN + + + G+ +K + + M
Sbjct: 203 TFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM 262
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + + +TY + Y ++G V M N + + TY +L S K
Sbjct: 263 ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSY-TYGSLISGMCKGGK 321
Query: 266 FEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWG----ILKSTFPPTNTS 320
E+A L+K++E+ Y+ LI YCN +L + +G +++ PT ++
Sbjct: 322 LEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDL---VKAFGYRDEMVRRAILPTVST 378
Query: 321 YLVLLQAL---AKLNAID---------------ILKQCFEEWESRCSSYD--MRLADVII 360
Y +L+ AL K++ D I RC + L D +I
Sbjct: 379 YNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMI 438
Query: 361 RAYLQKDMYEEAALIFNNAKK-RANASARFFKS--RE----------SFMIYYLRSRQLD 407
+Q + +LI+ +K+ R A+ F+ RE + + + + LD
Sbjct: 439 SKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLD 498
Query: 408 LALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAY 466
A A L E + + P +VT +T + E V+ A E K +K D +Y
Sbjct: 499 RAF----ALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISY 554
Query: 467 SLLIKTYIAAGKL 479
+ LI Y G +
Sbjct: 555 NTLISGYSKRGDI 567
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 129/341 (37%), Gaps = 44/341 (12%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YT+ ++N CKE ++A M+ L N V +N + Y G+ E R +++
Sbjct: 237 YTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDI 296
Query: 205 MKQRNISLDNLTY---IVWMQSYSHLNDIDGVERVFYEM----------------CNEC- 244
MK R + D+ TY I M L + G+ E+ CN+
Sbjct: 297 MKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGD 356
Query: 245 --------EDKCR------WTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYH 288
++ R +TY+ L ++A+ +K + + + P D Y+
Sbjct: 357 LVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVP-DSITYN 415
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI+ YC N A N ++ PT +Y L+ L+K N + FE+
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE 475
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLD 407
+S D+ + + +I + + A + KR E ++ R +
Sbjct: 476 GASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN------IVPDEVTYNTLMQGRCRE 529
Query: 408 LALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA 448
+ E L E K+ RP ++ +T + + D++ A
Sbjct: 530 GKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDA 570
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 115/302 (38%), Gaps = 16/302 (5%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
YC R GR A V++ M++R + + + K + A + E
Sbjct: 281 YCSR-----GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEI 335
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
TY L++ YC + +A ++M L +N L G+ ++
Sbjct: 336 GLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEA 395
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
++ M I D++TY + + Y + + EM ++ + TY++L
Sbjct: 396 DGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGI-QPTLVTYTSLIY 454
Query: 259 IYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS----T 313
+ K + A +L K + E D ++ LI +C NLD R + +LK
Sbjct: 455 VLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLD---RAFALLKEMDKRN 511
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P +Y L+Q + ++ ++ +E + R D + +I Y ++ +A
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAF 571
Query: 374 LI 375
I
Sbjct: 572 TI 573
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 83/212 (39%), Gaps = 44/212 (20%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+ K + A LFEK+ + + FN L + G ++ L+ +M
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+RNI D +TY MQ +CR
Sbjct: 508 DKRNIVPDEVTYNTLMQG-----------------------RCREG-------------- 530
Query: 266 FEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTS 320
K E A + L+EMK R D +Y+ LIS Y ++ DA +L F PT +
Sbjct: 531 --KVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLT 588
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
Y L+Q L K D+ ++ +E S+ + D
Sbjct: 589 YNALIQGLCKNQQGDLAEELLKEMVSKGITPD 620
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 132/336 (39%), Gaps = 7/336 (2%)
Query: 80 EYCVRSLRKFGRYR---HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG 136
E V +R+F R A+EV++ M F LD K + A F
Sbjct: 152 EVFVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFED 211
Query: 137 LS-EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
+ ++ + + LL +CKE A + +M E F + V +NNL + Y G+
Sbjct: 212 MRVRFSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKM 271
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
L+ +++++ + +Y + +Q+ +D RVF EM D TY+
Sbjct: 272 GDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCD-ADVVTYTA 330
Query: 256 LASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
L S + K + +K L+ + + P H +++ + + + K
Sbjct: 331 LVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIG 390
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P + Y V+++ KL ++ + E E S + ++I +L EA
Sbjct: 391 CIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEAC 450
Query: 374 LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLA 409
F +R S+R + + + LR +L+LA
Sbjct: 451 QYFKEMVERGLLSSRQYGILKDLLNALLRGEKLELA 486
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 127/284 (44%), Gaps = 16/284 (5%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G + GA + + M+ + ++ D + Y + L K R +A +++ M+ ++ + F
Sbjct: 252 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 311
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNR-----YTYGALLNCYCKELMTERALALFEK 169
+D +T + EK F LSE +N +YG+++N +CK A+A+ +
Sbjct: 312 NTLIDAYGRTGQL---EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 368
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M L N +N + Y+ G ++ LV +MK IS +TY + ++ + +
Sbjct: 369 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 428
Query: 230 IDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAY 287
I E + + N D + T +++ + + + +L + + + Y
Sbjct: 429 ISEAEEIINSLSNHRLIPDAVSYNTL--ISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 486
Query: 288 HFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAK 330
H LIS L+ + ++ ++++ P+N + ++++A +K
Sbjct: 487 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 530
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 119/301 (39%), Gaps = 13/301 (4%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR 144
L + GR +++ M S+KM +++ D ++ A F +Y KN
Sbjct: 142 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF---GKYLKNG 198
Query: 145 YTYG-----ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
T G LLN CK+ A + + + + V +N L Y + G+ E
Sbjct: 199 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAF 258
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
QMK R+I D++TY + I + + EM + + T++ L
Sbjct: 259 STFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT-VETFNTLIDA 317
Query: 260 YVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPP 316
Y + EK + L +++E +KP + +Y +++ +C + +AV + + P
Sbjct: 318 YGRTGQLEKCFIVLSEMQENGLKP-NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 376
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
Y ++ A + D E+ +S S + +++I+ + EA I
Sbjct: 377 NAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 436
Query: 377 N 377
N
Sbjct: 437 N 437
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 123/300 (41%), Gaps = 7/300 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI--AAAEKYFNGLSEY 140
+R + + G+ A V + M R + + F + K + + A A + +
Sbjct: 249 MRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGI 308
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A + YTYGA + CK + A+ +FE+M E NTV L + + G
Sbjct: 309 APDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLE 368
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC--EDKCRWTTYSNLAS 258
L +M R + D + Y + + + D+ + EM + DK +TT +
Sbjct: 369 LRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL--IDG 426
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKAYHFLIS-LYCNTSNLDAVNRVWGILKSTFPPT 317
+ EL E+ + +E D Y LIS L ++DA + ++++ P
Sbjct: 427 CCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPD 486
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
NT+Y +++ A K + + +E +++ + + +V++ + + A ++ N
Sbjct: 487 NTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLN 546
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRY 145
K G+ AL ++E M + + F + V ++ + +G A+ ++G+ E A N+
Sbjct: 530 KAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLE-HGKYEAKSVYSGMIEMGLAPNQA 588
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY ++ YCK+ + AL L+ +M K + +++ N L G+ EK ++N+M
Sbjct: 589 TYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEM 648
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
I + + + V + + S + V + +E + K Y+NL ++ + +
Sbjct: 649 SVMGIHPNLVIHRVLLNASSKSGKANAVLQ-MHEQLVDMGLKINQEAYNNLIVVFCRLRM 707
Query: 266 FEKAELALK-KLEEMKPRDRKAYHFLISLYCNTSNL 300
+KA LK + + D Y+ LI YC +S++
Sbjct: 708 TKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHV 743
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 118/286 (41%), Gaps = 10/286 (3%)
Query: 68 IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
++ G T+ M V L K + + A ++ + + + + +D K +
Sbjct: 335 VVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDM 394
Query: 128 AAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
E + E N TY +++N Y K+ + + A+ + +KM + + N + L
Sbjct: 395 ERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAIL 454
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECE 245
Y + G+ E L N+MK + ++N+ + V + + +D E + ++ +
Sbjct: 455 IDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGL 514
Query: 246 DKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLD 301
Y++L + KA K AL +EEM P D Y+ LI+ +
Sbjct: 515 -LLDHVNYTSLMDGFFKA---GKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE 570
Query: 302 AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
A + G+++ P +Y ++++A K +D + + E +S
Sbjct: 571 AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSH 616
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 146/353 (41%), Gaps = 38/353 (10%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
K+ + L++ YCK AL L E+M + L + V++N L + + G+ +K + L
Sbjct: 145 KDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSL 204
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
++++ + D++ + +ID +R+ + + + TY+ + S Y
Sbjct: 205 LHEISESRGVKDSVFF-----------NID--DRIKKD--DNLNLEADLITYTTIISTYC 249
Query: 262 KAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPP 316
K E+A AL EEM D Y +++ C L + +K P
Sbjct: 250 KQHGLEEAR-AL--YEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDP 306
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ +Y L+ +L K + C + R + D+ + ++ + +EA +F
Sbjct: 307 NHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMF 366
Query: 377 NNAKKRANASARFFKSRESFMIY---YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVD 433
RA + + ++ Y + ++ +E+ L E ++ H P +T
Sbjct: 367 -----RALSKLNLIPNSITYTALIDGYCKVGDME----RVESLLQEMEEKHINPNVITYS 417
Query: 434 TFFRFFEEEKDVDGAEEFCKVLKSLNCLDFS-AYSLLIKTYIAAGK--LASDM 483
+ + ++ +D A K + N + + Y++LI Y AGK +A+D+
Sbjct: 418 SIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDL 470
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ + TY AL+ YC+ ++ALA + +M N V +N L L G +
Sbjct: 723 FVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERD 782
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L ++MK+ ++ D TY + Y + + R++ EM + + +TY+ L S
Sbjct: 783 ELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVP-KTSTYNVLISD 841
Query: 260 YVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNR 305
+ K ++A L +++ P Y LI +CN S ++R
Sbjct: 842 FAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDR 888
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 139/364 (38%), Gaps = 48/364 (13%)
Query: 131 EKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYL 190
E NG + + TY +++N CK+ A L +M ++ N VA+ L
Sbjct: 263 EMIING---FLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLF 319
Query: 191 RLG-----------------------------------QPEKVRPLVNQMKQRNISLDNL 215
+ G +P++ + + + N+ +++
Sbjct: 320 KAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSI 379
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
TY + Y + D++ VE + EM E TYS++ + Y K + ++A +KK
Sbjct: 380 TYTALIDGYCKVGDMERVESLLQEM-EEKHINPNVITYSSIINGYTKKGILDEAINVMKK 438
Query: 276 -LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNA 333
L++ + Y LI YC + ++ +K S N + VL+ L +
Sbjct: 439 MLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKR 498
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSR 393
+D ++ ++ SR D ++ + K E AAL N ++ S F
Sbjct: 499 MDEAEELLKDVTSRGLLLDHVNYTSLMDGFF-KAGKESAAL--NMVEEMTEKSIPFDVVT 555
Query: 394 ESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCK 453
+ +I L L+ E ++ S + P Q T + + + ++ ++D A E
Sbjct: 556 YNVLINGL----LEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWN 611
Query: 454 VLKS 457
+KS
Sbjct: 612 EMKS 615
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 141/339 (41%), Gaps = 55/339 (16%)
Query: 57 GGSVTGALNAY-IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
G A++A+ ME + D + + + + R R A + E+ +S K F D
Sbjct: 142 AGLAAEAIHAFNRMEDYNCKPDKIAFSIL-ISILCRERRASQAQEFFDSLKDKFE-PDVI 199
Query: 116 VYLDLT---AKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKM 170
VY +L + I+ AE+ F + + N YTY +++ C+ RA +F +M
Sbjct: 200 VYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEM 259
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY------ 224
+ N++ +N+L ++++ G+ EKV + NQMK+ D +TY ++++
Sbjct: 260 LDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENL 319
Query: 225 -----------------------------SHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
+ L D++ R++ +M E + TY+
Sbjct: 320 EDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKM-KELNCEANTVTYNT 378
Query: 256 LASIYVKAE-----LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-- 308
L ++V ++ L K E+ K+E + Y LI++YC + + + +
Sbjct: 379 LMKMFVASKSTDMVLKLKTEMDENKIEP----NVNTYKVLITMYCGMGHWNNAYKFFREM 434
Query: 309 ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
I + P+ Y ++LQ L K + ++ E+ R
Sbjct: 435 IDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKMVDR 473
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 110/281 (39%), Gaps = 15/281 (5%)
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED---KCRWTTYSNLA 257
++ MK RN+ + T+++ M+ Y G+ N ED K +S L
Sbjct: 116 FIDLMKARNVDVTVETFLILMRRYVRA----GLAAEAIHAFNRMEDYNCKPDKIAFSILI 171
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPP 316
SI + +A+ L++ D Y L+ +C N+ RV+G +K + P
Sbjct: 172 SILCRERRASQAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKP 231
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y +++ +L + I F E + + ++R +++ E+ ++
Sbjct: 232 NVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVY 291
Query: 377 NNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
N K+ + + + + D L + + + P T +T F
Sbjct: 292 NQMKRLGCEPDTVTYN------FLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLF 345
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAA 476
+ DV+ A K +K LNC + Y+ L+K ++A+
Sbjct: 346 GCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVAS 386
>gi|357127701|ref|XP_003565517.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Brachypodium distachyon]
Length = 579
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+G ++ YC+E E AL +M + N + FN L +L ++ M
Sbjct: 240 TWGIIVGGYCREGRLEEALRCVRQMKDAGVGPNVIVFNTLLKGFLDANDAAAAADVLGLM 299
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+Q I D +TY + + S L + +VF M E + YS LA YV+A+
Sbjct: 300 EQFGIKPDIVTYSHQLNALSSLGHMARCAKVFDRML-EAGIEPDPQVYSILAKGYVRAQQ 358
Query: 266 FEKAELALKKLEEMKPRDRKA-YHFLISLYCNTSNLDAVNRVWGILKS 312
KAE L+++ + R + +IS +C+ +++D RV+ ++
Sbjct: 359 PGKAEELLQQMGRLGVRPNVVTFTTVISGWCSVADMDNATRVYDKMRG 406
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LN R +F++M E + ++ L+ Y+R QP K L+ QM
Sbjct: 310 TYSHQLNALSSLGHMARCAKVFDRMLEAGIEPDPQVYSILAKGYVRAQQPGKAEELLQQM 369
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + + +T+ + + + D+D RV+ +M + T+ L Y + +
Sbjct: 370 GRLGVRPNVVTFTTVISGWCSVADMDNATRVYDKM-RGAGVRPNLRTFETLIWGYSEQKQ 428
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLIS 292
KAE L+ +++ R +++ + L++
Sbjct: 429 PWKAEKVLQMMKDAGVRPKQSTYSLVA 455
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 139/346 (40%), Gaps = 46/346 (13%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF-AVYLDLTAKTNGIAAAEKYFNGL 137
L VR L K AL V ++ RK + + + ++ L L + + E Y
Sbjct: 156 LSEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMC 215
Query: 138 SEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
SE + TY AL++ + K + A+ LF++M E + L +Y ++G+
Sbjct: 216 SEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKV 275
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY-- 253
E+ LV +M+ R L TY ++ L VE + N +D C+
Sbjct: 276 EEALGLVKEMRARRCLLTVFTYTELIRG---LGKSGRVEDAYMTYKNMLKDGCKPDVVLM 332
Query: 254 SNLASIYVKA-------ELFEKAEL------------ALKKLEEMKPRDRKA-------- 286
+NL +I ++ +LF++ +L +K L E K +A
Sbjct: 333 NNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMK 392
Query: 287 ----------YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAID 335
Y LI YC T+ ++ A+ + + + FPP +Y L+ L D
Sbjct: 393 KDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYD 452
Query: 336 ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
+ + F+E + C R+ V+I+ + + EA +FN KK
Sbjct: 453 VANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKK 498
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 14/318 (4%)
Query: 66 AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTD-FAVYLDLTA 122
A +++ + V+ ++C V+S+ + +R A EV EW+ R + + L +
Sbjct: 175 ADVLDDRKVQMTPTDFCFVVKSVGQESWHR-AFEVYEWLNLRHWYSPNARMLSTILAVLG 233
Query: 123 KTNGIAAAEKYFNGLSEYAKNRY-TYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
K N A + F +N Y A++ Y + + LF+ M E + V+
Sbjct: 234 KANQEPLAVEVFTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVS 293
Query: 182 FNNLSTMYLRLGQ--PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
FN L L+ G+ P L+ ++++ + D +TY + + S ++++ VF +
Sbjct: 294 FNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDD 353
Query: 240 M-CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK--PRDRKAYHFLISLYCN 296
M + CE W TY+ + S+Y + L KAE LE P D +Y+ + +
Sbjct: 354 MVAHHCEPDL-W-TYNAMISVYGRCGLSGKAEQLFNDLESRGFFP-DAVSYNSFLYAFAR 410
Query: 297 TSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
N++ V + ++K F +Y ++ K D+ Q + + +S + D+
Sbjct: 411 EGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVIT 470
Query: 356 ADVIIRAYLQKDMYEEAA 373
V+I + + + EEAA
Sbjct: 471 YTVLIDSLGKTNKIEEAA 488
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 119/270 (44%), Gaps = 8/270 (2%)
Query: 62 GALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLT 121
N + +G + D + +++L GR V++ ++ S + + LD
Sbjct: 836 AVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAF 895
Query: 122 AKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNT 179
A+ I +K ++G+ + Y + + Y + C+ A+ +M+E F +
Sbjct: 896 ARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDL 955
Query: 180 VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN-DIDGVERVFY 238
+N++ MY+ + K + ++K+ + D TY + + Y + +G+ V
Sbjct: 956 SIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGL--VLM 1013
Query: 239 EMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNT 297
+ + + TY +L + + K +L E+AE ++L+ + DR YH ++ +Y N+
Sbjct: 1014 DEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNS 1073
Query: 298 SNLDAVNRVWGILK--STFPPTNTSYLVLL 325
+ R++ ++K P T +L+++
Sbjct: 1074 GSHSKAQRLFSMMKDEGVEPTIATMHLLMV 1103
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 110/272 (40%), Gaps = 42/272 (15%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+TY A+++ Y + ++ +A LF ++ F + V++N+ + R G EKV+ + +
Sbjct: 364 WTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEE 423
Query: 205 M----------------------KQRNISL-------------DNLTYIVWMQSYSHLND 229
M Q +++L D +TY V + S N
Sbjct: 424 MVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNK 483
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYH 288
I+ + EM N K TYS L Y KA +AE + R D+ AY
Sbjct: 484 IEEAAGMMSEMLNTGV-KPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYS 542
Query: 289 FLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
++ ++ + A+ ++ P ++ Y ++L+ L N ++ + + + E
Sbjct: 543 VMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEV 602
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
C ++ ++++ D Y+EAA + A
Sbjct: 603 CGMNPQAISYILVKG----DCYDEAAKMLRRA 630
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 80/443 (18%), Positives = 169/443 (38%), Gaps = 62/443 (13%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR----- 144
GR+ AL+++E ++ +T + + A + A++ L EY+ +R
Sbjct: 653 GRHSVALDLLELLKE------HTPRSSQMITEALVVMLCKAQQLDTALKEYSNSRELGFT 706
Query: 145 ---YTYGALLNCYCK-ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ AL+ C + EL TE A +F M + + ++ +Y ++G PE
Sbjct: 707 GSFTMFEALIQCCLENELFTE-ASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHH 765
Query: 201 LVNQMKQRNISLDNLT-YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L++ + L+N++ Y+ +++Y L E V M C R ++ L
Sbjct: 766 LIDLTETDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNR-KVWNALIEA 824
Query: 260 YVKAELFEKAELALKKLEEMKPR------------------------------------D 283
Y + +E+A + + P
Sbjct: 825 YAASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKIS 884
Query: 284 RKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
+ + ++ + N+ V +++ G+ + + P+ Y V+ Q L + + ++
Sbjct: 885 KSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLS 944
Query: 343 EWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLR 402
E E D+ + + +++ Y+ D + + I+ K+ + ++ Y R
Sbjct: 945 EMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDE--DTYNILIVMYCR 1002
Query: 403 SRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-L 461
+ L M+ E + P T + F +++ V+ AEE + L+S C L
Sbjct: 1003 DHRPKEGLVLMD----EMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKL 1058
Query: 462 DFSAYSLLIKTYIAAGKLASDMR 484
D S Y +++K Y +G + R
Sbjct: 1059 DRSFYHIMMKIYRNSGSHSKAQR 1081
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 7/190 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G+ AL++ M+S + + V +D KTN I A + + +
Sbjct: 445 KQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLR 504
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL+ Y K A F+ M + +A++ + ++LR +P++ +M
Sbjct: 505 TYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEM 564
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
I ++ Y + +++ + N ++ + RV +M C + +Y I VK +
Sbjct: 565 IHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISY-----ILVKGDC 619
Query: 266 FEKAELALKK 275
+++A L++
Sbjct: 620 YDEAAKMLRR 629
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 12/264 (4%)
Query: 120 LTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
L+ NG K+FN + + A + +TY +++ CKE E + LF +M E+
Sbjct: 264 LSKSGNG-QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSP 322
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ V +N+L Y ++G E+V L N+MK D +TY + Y + F
Sbjct: 323 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 382
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISL 293
EM N K TYS L + K + + A+K +M+ + Y LI
Sbjct: 383 SEMKNN-GLKPNVVTYSTLIDAFCKEGMMQG---AIKLFVDMRRTGLLPNEFTYTSLIDA 438
Query: 294 YCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
C NL +A + +L++ +Y LL L K + ++ F S +
Sbjct: 439 NCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 498
Query: 353 MRLADVIIRAYLQKDMYEEAALIF 376
++ ++ Y++ + E+A I
Sbjct: 499 QQVYTALVHGYIKAERMEDAMKIL 522
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 108/321 (33%), Gaps = 76/321 (23%)
Query: 135 NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
NGL N TY L++ +CKE M + A+ LF M L N + +L + G
Sbjct: 388 NGLK---PNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGN 444
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ L+N M Q + L+ +TY + + E VF M + Y+
Sbjct: 445 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP-NQQVYT 503
Query: 255 NLASIYVKAELFEKAELALKK--------------------------------LEEMKPR 282
L Y+KAE E A LK+ LEEMK R
Sbjct: 504 ALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 563
Query: 283 DRKA---------------------------------------YHFLISLYCNTSNLD-A 302
A Y LI C ++ A
Sbjct: 564 GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELA 623
Query: 303 VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
V+ +L P Y L+ L K N I+ K+ F+E + R + D+ +I
Sbjct: 624 VDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 683
Query: 363 YLQKDMYEEAALIFNNAKKRA 383
L+ +EA ++ + + A
Sbjct: 684 NLKHGNLQEALVLISRMTELA 704
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 2/155 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G+ AL + M+ + + + V +D K + A YF + N
Sbjct: 581 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVA 640
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y +L++ CK E A LF++M + AF L L+ G ++ L+++M
Sbjct: 641 VYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 700
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+ I D Y + +S ++ + F EM
Sbjct: 701 TELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEM 735
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 161/400 (40%), Gaps = 45/400 (11%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
Y +R KFG+ R E+ +WM K+ +D + L+L + + A ++ +E
Sbjct: 11 YKLRITAKFGQAR---EICDWMIRNKVFEIEESDHVLLLELVGRISKFQATRCFWEMPAE 67
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
++ Y A+L + + A +M L + +N + MY R + +KVR
Sbjct: 68 L-RSEDAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDKVR 126
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+ +++ ++ D TY++ +++ + DG+E + +E +
Sbjct: 127 AMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIEAEVRKFLDE--------------QL 172
Query: 260 YVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP-TN 318
+ LF Y ++ +Y +L A+ + IL TF ++
Sbjct: 173 TSRQPLF-------------------IYECMLRIYTLLRDLAAIENLRSILLKTFKKFSS 213
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+SY LL + +L ++ ++ F E ++ + +++ +I Y E+A ++
Sbjct: 214 SSYNCLLDSYRQLGEVERAERLFNEIGNKF-TLNIQSYRAMIAVYASNGRMEKANELY-- 270
Query: 379 AKKRANASARFFKSRESFMIY-YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
K+ A + M+ Y+ +R AL + A + H +P++ T R
Sbjct: 271 -KQLFRAGFECHPAIYHAMVAGYIDARDHSNALIQYGKAWDRSLLGHPKPLRATTLLVLR 329
Query: 438 FFEEEKDVDGAEEFCKVLK-SLNCLDFSAYSLLIKTYIAA 476
E+ D AE + LK D Y+ L+K YI A
Sbjct: 330 VLAEQGDFSRAESIVRDLKRERQGSDVEVYNWLLKAYIKA 369
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 126/284 (44%), Gaps = 16/284 (5%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G + GA + + M+ + ++ D + Y + L K R +A +++ M+ ++ + F
Sbjct: 204 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 263
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNR-----YTYGALLNCYCKELMTERALALFEK 169
+D +T EK F LSE +N +YG+++N +CK A+A+ +
Sbjct: 264 NTLIDAYGRT---GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 320
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M L N +N + Y+ G ++ LV +MK IS +TY + ++ + +
Sbjct: 321 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 380
Query: 230 IDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAY 287
I E + + N D + T +++ + + + +L + + + Y
Sbjct: 381 ISEAEEIINSLSNHRLIPDAVSYNTL--ISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 438
Query: 288 HFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAK 330
H LIS L+ + ++ ++++ P+N + ++++A +K
Sbjct: 439 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 482
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 119/301 (39%), Gaps = 13/301 (4%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR 144
L + GR +++ M S+KM +++ D ++ A F +Y KN
Sbjct: 94 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF---GKYLKNG 150
Query: 145 YTYG-----ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
T G LLN CK+ A + + + + V +N L Y + G+ E
Sbjct: 151 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAF 210
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
QMK R+I D++TY + I + + EM + + T++ L
Sbjct: 211 STFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT-VETFNTLIDA 269
Query: 260 YVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPP 316
Y + EK + L +++E +KP + +Y +++ +C + +AV + + P
Sbjct: 270 YGRTGQLEKCFIVLSEMQENGLKP-NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 328
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
Y ++ A + D E+ +S S + +++I+ + EA I
Sbjct: 329 NAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEII 388
Query: 377 N 377
N
Sbjct: 389 N 389
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 9/262 (3%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+L C R G + A + + M +R++ + LD K + A + +
Sbjct: 345 LLAVCSRG----GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 138 S--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
N +Y +++ + K + AL LF +M L + V++N L ++Y ++G+
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
E+ ++ +M I D +TY + Y D V++VF EM E TYS
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLPNLLTYST 519
Query: 256 LASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKST 313
L Y K L+++A ++ + R D Y LI C + AV+ + + K
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 314 FPPTNTSYLVLLQALAKLNAID 335
P +Y ++ A + +D
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMD 601
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY ALL CK + ALA+ +M K NT +N L + R G + L+ Q
Sbjct: 654 YTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQ 713
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MKQ + D TY ++ + D+ + EM K TY+ L + +A
Sbjct: 714 MKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEM-EVVGVKPNIKTYTTLIHGWARAS 772
Query: 265 LFEKAELALKKLEEMKP----RDRKAYHFLIS 292
L EK ALK +EMK D+ YH L++
Sbjct: 773 LPEK---ALKCFQEMKSAGLKPDKAVYHCLMT 801
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 141/368 (38%), Gaps = 32/368 (8%)
Query: 41 GNEDK---LYKRLSALGATG---------------GSVTGALN-AYIMEGKTVRKDMLEY 81
GNE+K ++ RL G T G V+ AL + +ME ++ +M Y
Sbjct: 422 GNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTY 481
Query: 82 C--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
+ + + +A V E + + D +Y ++ G+ ++ + E
Sbjct: 482 SMLINGFVRLKDWANAFAVFEDVVKDGLK---PDVVLYNNIIRAFCGMGNMDRAIRTVKE 538
Query: 140 YAKNRY-----TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
K R+ T+ +++ + + RAL +F+ M + FN L + Q
Sbjct: 539 MQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQ 598
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
EK ++++M IS + TY M Y+ L D F ++ E + + TY
Sbjct: 599 MEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVY-TYE 657
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNL-DAVNRVWGILKS 312
L K+ + A +++ K PR+ Y+ LI + ++ +A + + +
Sbjct: 658 ALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQE 717
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y + A K + + +E E +++ +I + + + E+A
Sbjct: 718 GVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKA 777
Query: 373 ALIFNNAK 380
F K
Sbjct: 778 LKCFQEMK 785
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+L+ C +S GR + AL V M S+K+ + + + +D A+ + A + +
Sbjct: 659 LLKACCKS----GRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQM 714
Query: 138 SEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
+ + +TY + +N CK +RA ++M+ + N + L + R P
Sbjct: 715 KQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLP 774
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQS 223
EK +MK + D Y M S
Sbjct: 775 EKALKCFQEMKSAGLKPDKAVYHCLMTS 802
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R +G ++ Y + A FE M + + +L Y E+ V
Sbjct: 267 SRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCV 326
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT-----YSNLA 257
+MK+ I + +TY + + ++ + D + + F E K R TT Y N+
Sbjct: 327 RKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEA------KERHTTLNAIIYGNII 380
Query: 258 SIYVKAELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-T 313
+ +A +AE ++++EE P D YH ++ Y N + V+ LK
Sbjct: 381 YAHCQACNMTQAEALVREMEEEGIDAPID--IYHTMMDGYTIIGNEEKCLIVFDRLKECG 438
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
F P+ SY L+ K+ + + + E ++M+ ++I +++ + A
Sbjct: 439 FTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAF 498
Query: 374 LIFNNAKK 381
+F + K
Sbjct: 499 AVFEDVVK 506
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 39/310 (12%)
Query: 47 YKRLSALGATGGS--VTGALNAYIMEGKTVRKDMLE--YCVRSLRKFGRYRHALEVIEWM 102
++R+ A G T S T ++AY V +DM E CVR +++ G
Sbjct: 332 FERMRARGITPTSRIYTSLIHAY-----AVGRDMDEALSCVRKMKEEG------------ 374
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMT 160
+ S ++V + +K AA+ +F+ K N YG ++ +C+
Sbjct: 375 ----IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
ERA AL +M+E ++ + Y + +K + ++K+ + +TY
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EE 278
+ Y+ + I V M E K TYS + + +VK + + A + + E
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGV-KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 279 MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAK------- 330
MKP D Y+ +IS +C N+D A+ V + K PT +++ ++ AK
Sbjct: 550 MKP-DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 331 LNAIDILKQC 340
L D++++C
Sbjct: 609 LEVFDMMRRC 618
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGAL 150
R A+E+++ M + + + + A A +YF L + +TY AL
Sbjct: 638 RQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 697
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
L CK + ALA+ ++M N+ +N L + R G + L+ QMK+ +
Sbjct: 698 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 757
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE 270
D TY ++ + S D++ + EM K TY+ L + +A L EKA
Sbjct: 758 KPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKAL 816
Query: 271 LALKKLEEM--KPRDRKAYHFLIS 292
++++ M KP D+ YH L++
Sbjct: 817 SCYEEMKAMGIKP-DKAVYHCLLT 839
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 133/325 (40%), Gaps = 17/325 (5%)
Query: 58 GSVTGALN-AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G ++ AL + +M+ + V+ ++ Y + K + +A V E M M D
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK---PDV 554
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRY-----TYGALLNCYCKELMTERALALFEK 169
+Y ++ + G+ ++ + E K R+ T+ +++ Y K R+L +F+
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M + FN L + Q ++ +++M +S + TY MQ Y+ + D
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQAVEI---LDEMTLAGVSANEHTYTKIMQGYASVGD 671
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYH 288
F + NE D TY L K+ + A K++ PR+ Y+
Sbjct: 672 TGKAFEYFTRLQNEGLD-VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 730
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI + ++ +A + + + K P +Y + A +K ++ Q EE E+
Sbjct: 731 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 790
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEA 372
+++ +I+ + + + E+A
Sbjct: 791 GVKPNIKTYTTLIKGWARASLPEKA 815
>gi|297813013|ref|XP_002874390.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320227|gb|EFH50649.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1027
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 5/211 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + A+ + E M SR + S A L L KT A F + ++ +
Sbjct: 328 KAGDWDQAVGLYEDMRSRGIVPSNYTCASMLSLYYKTENYPKALSLFADMERNKIPADEV 387
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
G ++ Y K + A ++FE+ + L L + + +S ++L G K ++ M
Sbjct: 388 IRGLIIRIYGKLGLFHDAQSIFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMM 447
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K R+I L YIV +Q Y+ + ++D E F + N ++ +++ ++Y + L
Sbjct: 448 KTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSNTGLPDA--SSCNDMLNLYTRLNL 505
Query: 266 FEKAELALKKLEEMKPR-DRKAYHFLISLYC 295
EKA+ +K++ + + + + Y + +YC
Sbjct: 506 GEKAKGFIKQITADQVQFNIELYKMAMRVYC 536
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 3/201 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N +TY +++ Y K+ E AL F +M L F+ V ++++ + ++ G ++ L
Sbjct: 280 NEFTYTLVVSSYAKQGFKEEALWAFGEMKSLGFIPEEVTYSSVIGLSVKAGDWDQAVGLY 339
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M+ R I N T + Y + +F +M + + IY K
Sbjct: 340 EDMRSRGIVPSNYTCASMLSLYYKTENYPKALSLFADM-ERNKIPADEVIRGLIIRIYGK 398
Query: 263 AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTS 320
LF A+ ++ E + D K Y + ++ N+ N+ V ++K+ P + +
Sbjct: 399 LGLFHDAQSIFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFA 458
Query: 321 YLVLLQALAKLNAIDILKQCF 341
Y+V+LQ AK+ +D ++ F
Sbjct: 459 YIVMLQCYAKIQNVDCAEEAF 479
>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
Length = 808
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 6/242 (2%)
Query: 127 IAAAEKYFNGLSEYAKN--RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I A+ F + +Y N R+TY +++ CK A +F+ + E + V N+
Sbjct: 267 IQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNS 326
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + G ++ ++ M+ + D +TY + + + D++ ++ ++ +
Sbjct: 327 LINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQG 386
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAV 303
+ TYS L + K LF + E L ++ + D AY LI Y +
Sbjct: 387 ME-LNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRA 445
Query: 304 NRVWGILKST--FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
+VW ++ S+ PT+ +++ +L L K +D + E S+ D+ L +V+I
Sbjct: 446 LQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVID 505
Query: 362 AY 363
Y
Sbjct: 506 GY 507
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 117/304 (38%), Gaps = 8/304 (2%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE- 139
YC R G L ++ ME + + + + + + + + E + E
Sbjct: 321 YCRR-----GDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKER 375
Query: 140 -YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ N Y ++ CK +ALA+ +M +F + V FN L + R G E+
Sbjct: 376 GLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEA 435
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
L+ + +R + + L+Y + + ++ + EM T + +
Sbjct: 436 LKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHG 495
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAV-NRVWGILKSTFPPT 317
+ V ++ E + K E D Y+ LIS C L A N + +L+ P
Sbjct: 496 LVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPD 555
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
Y L+ + + + ++ FE E + D+ + +I+ Y + M EA + +
Sbjct: 556 KFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMS 615
Query: 378 NAKK 381
+ +K
Sbjct: 616 SMRK 619
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 5/137 (3%)
Query: 109 FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR--YTYGALLNCYCKELMTERALAL 166
F YT +D +++ ++ A K F + E R Y A++ YCK M A+
Sbjct: 557 FVYTTL---IDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMC 613
Query: 167 FEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSH 226
M ++ + + + L Y + G + + M +R + +TY + Y +
Sbjct: 614 MSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCN 673
Query: 227 LNDIDGVERVFYEMCNE 243
+ + D E +F M +E
Sbjct: 674 IGNTDSAEVLFASMQSE 690
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 39/310 (12%)
Query: 47 YKRLSALGATGGS--VTGALNAYIMEGKTVRKDMLE--YCVRSLRKFGRYRHALEVIEWM 102
++R+ A G T S T ++AY V +DM E CVR +++ G
Sbjct: 332 FERMRARGITPTSRIYTSLIHAY-----AVGRDMDEALSCVRKMKEEG------------ 374
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMT 160
+ S ++V + +K AA+ +F+ K N YG ++ +C+
Sbjct: 375 ----IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
ERA AL +M+E ++ + Y + +K + ++K+ + +TY
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EE 278
+ Y+ + I V M E K TYS + + +VK + + A + + E
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGV-KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 279 MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAK------- 330
MKP D Y+ +IS +C N+D A+ V + K PT +++ ++ AK
Sbjct: 550 MKP-DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 331 LNAIDILKQC 340
L D++++C
Sbjct: 609 LEVFDMMRRC 618
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGAL 150
R A+E+++ M + + + + A A +YF L + +TY AL
Sbjct: 638 RQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 697
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
L CK + ALA+ ++M N+ +N L + R G + L+ QMK+ +
Sbjct: 698 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 757
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE 270
D TY ++ + S D++ + EM K TY+ L + +A L EKA
Sbjct: 758 KPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKAL 816
Query: 271 LALKKLEEM--KPRDRKAYHFLIS 292
++++ M KP D+ YH L++
Sbjct: 817 SCYEEMKAMGIKP-DKAVYHCLLT 839
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 133/325 (40%), Gaps = 17/325 (5%)
Query: 58 GSVTGALN-AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G ++ AL + +M+ + V+ ++ Y + K + +A V E M M D
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK---PDV 554
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRY-----TYGALLNCYCKELMTERALALFEK 169
+Y ++ + G+ ++ + E K R+ T+ +++ Y K R+L +F+
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M + FN L L + + ++++M +S + TY MQ Y+ + D
Sbjct: 615 MRRCGCVPTVHTFNGLIN---GLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 671
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYH 288
F + NE D TY L K+ + A K++ PR+ Y+
Sbjct: 672 TGKAFEYFTRLQNEGLD-VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 730
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI + ++ +A + + + K P +Y + A +K ++ Q EE E+
Sbjct: 731 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 790
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEA 372
+++ +I+ + + + E+A
Sbjct: 791 GVKPNIKTYTTLIKGWARASLPEKA 815
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 14/325 (4%)
Query: 58 GSVTGALN-AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G ++ AL + +M+ + V+ ++ Y + K + +A V E M M D
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK---PDV 554
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRY-----TYGALLNCYCKELMTERALALFEK 169
+Y ++ + G+ ++ + E K R+ T+ +++ Y K R+L +F+
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M + FN L + Q EK ++++M +S + TY MQ Y+ + D
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYH 288
F + NE D TY L K+ + A K++ PR+ Y+
Sbjct: 675 TGKAFEYFTRLQNEGLD-VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI + ++ +A + + + K P +Y + A +K ++ Q EE E+
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEA 372
+++ +I+ + + + E+A
Sbjct: 794 GVKPNIKTYTTLIKGWARASLPEKA 818
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 39/310 (12%)
Query: 47 YKRLSALGATGGS--VTGALNAYIMEGKTVRKDMLE--YCVRSLRKFGRYRHALEVIEWM 102
++R+ A G T S T ++AY V +DM E CVR +++ G
Sbjct: 332 FERMRARGITPTSRIYTSLIHAY-----AVGRDMDEALSCVRKMKEEG------------ 374
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMT 160
+ S ++V + +K AA+ +F+ K N YG ++ +C+
Sbjct: 375 ----IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
ERA AL +M+E ++ + Y + +K + ++K+ + +TY
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EE 278
+ Y+ + I V M E K TYS + + +VK + + A + + E
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGV-KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 279 MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAK------- 330
MKP D Y+ +IS +C N+D A+ V + K PT +++ ++ AK
Sbjct: 550 MKP-DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 331 LNAIDILKQC 340
L D++++C
Sbjct: 609 LEVFDMMRRC 618
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+TY ALL CK + ALA+ ++M N+ +N L + R G + L+ Q
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK+ + D TY ++ + S D++ + EM K TY+ L + +A
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARAS 813
Query: 265 LFEKAELALKKLEEM--KPRDRKAYHFLIS 292
L EKA ++++ M KP D+ YH L++
Sbjct: 814 LPEKALSCYEEMKAMGIKP-DKAVYHCLLT 842
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY ALL CK + ALA+ ++M NT +N L + R G + L+ Q
Sbjct: 697 YTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQ 756
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK+ + D TY ++ + S D+ + EM K TY+ L + + +A
Sbjct: 757 MKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEM-KSVGVKPNVKTYTTLINGWARAS 815
Query: 265 LFEKAELALK--KLEEMKPRDRKAYHFLIS 292
L EKA + KL +KP DR YH L++
Sbjct: 816 LPEKALSCFEEMKLSGLKP-DRAVYHCLMT 844
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 7/240 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R YG ++N Y + RA FEKM ++ + NL Y E+ V
Sbjct: 310 SRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCV 369
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK+ I + +TY + + ++ + + + F E E Y N+ Y +
Sbjct: 370 RKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQE-AKEKHSSLNAIIYGNIIYAYCQ 428
Query: 263 AELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+KAE ++++EE P D YH ++ Y + D V+ K P+
Sbjct: 429 RCNMDKAEALVREMEEEGIDAPID--IYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSV 486
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+Y L+ AKL + + +E E ++M+ ++I +L+ + A IF +
Sbjct: 487 ITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFED 546
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y L++C+ K L +E+A+ LF KM ++ N + L +++ + + L MK
Sbjct: 528 YSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMK 587
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAEL 265
+ + D + Y + + + ++ +F EM E C TY+ + Y+K
Sbjct: 588 ESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNV--VTYTCFINEYLK--- 642
Query: 266 FEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK--STFPPTNT 319
K A K E+MK R D+ Y LI+ +CNT ++ ++ +K P
Sbjct: 643 LNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVV 702
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESR-----CSS 350
Y L+ + KLN D ++ +EE ++ CSS
Sbjct: 703 MYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSS 738
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 128/302 (42%), Gaps = 9/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRY 145
K GR ALEV E M++ + +++ +D + + +A K++ ++ ++ + +
Sbjct: 362 KEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAF 421
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y +L+ Y K AL F M +L +T+A N++ ++Y R K L +
Sbjct: 422 NYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKF 481
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--NECEDKCRWTTYSNLASIYVKA 263
++ + + +Y ++ + + ++ M N D YS L S + K
Sbjct: 482 QENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPD---VVNYSTLISCFAKR 538
Query: 264 ELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSY 321
EKA + K+ ++ + K Y LI+L+ + +D R++ G+ +S P +Y
Sbjct: 539 LNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAY 598
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
L+ + + F+E S ++ I YL+ + +A ++ K+
Sbjct: 599 TSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKE 658
Query: 382 RA 383
R
Sbjct: 659 RG 660
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELM 159
M + F+ + + ++L + A + F G+ E ++ Y +L+ +C
Sbjct: 551 MTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGE 610
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
RA ALF++M N V + YL+L + + L +MK+R + D + Y +
Sbjct: 611 MTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTM 670
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM 279
+ ++ + +++ E +F EM E Y+ L + Y+K ++AE K EEM
Sbjct: 671 LIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAE---KLYEEM 727
Query: 280 KPR 282
+ +
Sbjct: 728 RAK 730
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
Y+Y L++ +C++ ++A +F++M L N +++ L + + G+ +K + +
Sbjct: 316 YSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEE 375
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK I D +Y + + + D+D + + EM + + Y +L Y K++
Sbjct: 376 MKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAF-NYCSLIKGYYKSK 434
Query: 265 LFEKA--ELALKKLEEMKPRDRKAYHFLISLYCNTSNLD 301
F A E + + M P D A + ++S+YC + +
Sbjct: 435 QFANALKEFRIMQKLGMWP-DTIACNHILSIYCRKPDFN 472
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 9/199 (4%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+S N TYG + CK + A L + + N FN + + G +
Sbjct: 238 MSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILD 297
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
+ + +MK I D +Y + + + +D VF EM N + +YS L
Sbjct: 298 EASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIY-SYSIL 356
Query: 257 ASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
+ K +K AL+ EEMK D +Y LI +C ++D+ + W + S
Sbjct: 357 IDGFCKEGRVDK---ALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTS 413
Query: 313 -TFPPTNTSYLVLLQALAK 330
F P+ +Y L++ K
Sbjct: 414 NNFSPSAFNYCSLIKGYYK 432
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 102/255 (40%), Gaps = 11/255 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
+ L + G A EV + M++ + +++ +D + + A + F + S
Sbjct: 287 IYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGI 346
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N Y+Y L++ +CKE ++AL +FE+M L + +++ L + R G +
Sbjct: 347 LPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIK 406
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW---TTYSNLA 257
+M N S Y ++ Y + F M + W +++
Sbjct: 407 FWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM----QKLGMWPDTIACNHIL 462
Query: 258 SIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFP 315
SIY + F KA +K +E + +Y+ I C S + A+ + +LK
Sbjct: 463 SIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVL 522
Query: 316 PTNTSYLVLLQALAK 330
P +Y L+ AK
Sbjct: 523 PDVVNYSTLISCFAK 537
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY ALL CK + ALA+ ++M NT +N L + R G + L+ Q
Sbjct: 299 YTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQ 358
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK+ + D TY ++ + S D+ + EM K TY+ L + + +A
Sbjct: 359 MKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEM-KSVGVKPNVKTYTTLINGWARAS 417
Query: 265 LFEKAELALK--KLEEMKPRDRKAYHFLIS 292
L EKA + KL +KP DR YH L++
Sbjct: 418 LPEKALSCFEEMKLSGLKP-DRAVYHCLMT 446
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 5/191 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N YG ++ YC+ ++A AL +M+E ++ + Y +G +K +
Sbjct: 17 NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF 76
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ K+ ++ +TY + Y+ L + V EM K TYS L + ++K
Sbjct: 77 ERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEM-EHAGIKHNMKTYSMLINGFLK 135
Query: 263 AELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNT 319
+ + A + L + +KP D Y+ +I+ +C +D AV V + K PT
Sbjct: 136 LKDWANAFAIFEDLIKDGIKP-DVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTR 194
Query: 320 SYLVLLQALAK 330
+++ ++ A+
Sbjct: 195 TFMPIIHGFAR 205
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y L+ +C+ T++A LFE+M + + N V F +L +LR G + L++QM
Sbjct: 327 SYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQM 386
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ +S D + Y + ++D +F +M E E +Y++L S ++
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMI-EHEITPDAISYNSLISGLCRS-- 443
Query: 266 FEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVW 307
+ A+K E+MK + D + F+I L A +VW
Sbjct: 444 -GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVW 488
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 126/304 (41%), Gaps = 19/304 (6%)
Query: 57 GGSVTGAL---NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI-EWMESRKMHFSYT 112
G VT A+ NA I G + V L + A E++ E ++S ++ S
Sbjct: 162 AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIV 221
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKM 170
+ + K I AE + +S+ + TY LLN Y M +RA + +M
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEM 281
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRP-LVNQMKQRNISLDNLTYIVWMQSYSHLND 229
+ ++N L + R+ P++ ++ +M+ R D ++Y ++++ ++
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFC-DVVSYSTLIETFCRASN 340
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE-KAELALKKLEEMK----PRDR 284
++F EM K T S+ +KA L E + +A K L++M DR
Sbjct: 341 TKKAYKLFEEM----RQKGIVTNVVTFTSL-IKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 285 KAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
Y ++ C + N+D ++ +++ P SY L+ L + + + FE+
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Query: 344 WESR 347
+ +
Sbjct: 456 MKGK 459
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 8/258 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
V +L K GR A V M R + ++ +N ++ A + FN + +
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y L+N YCK M + A+ LF+++ + N +N+L +LG+ V+
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQE 391
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
LV++M R S D +TY +++ ++ + +F ++ + Y + +
Sbjct: 392 LVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPD--FYMYDVIVENF 449
Query: 261 VKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
K E + AE AL+ L P R Y +I+ C + D A+ + + + PP
Sbjct: 450 CKGEKLKIAEEALQHLLIHGCCPNVR-TYTIMINALCKDCSFDEAMTLLSKMDDNDCPPD 508
Query: 318 NTSYLVLLQALAKLNAID 335
++ ++ AL + N D
Sbjct: 509 AVTFETIIGALQERNETD 526
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 3/236 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ CK+ + AL LF + L + VA+N+L +GQ + L+
Sbjct: 194 NLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLL 253
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY-V 261
M + NI+ D+ T+ + + + I + VF M E K TY+ L + +
Sbjct: 254 TMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE-KPDIVTYNALMEGFCL 312
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTS 320
+ E EL + ++ D Y+ LI+ YC +D ++ ++ P +
Sbjct: 313 SNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLAT 372
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
Y L+ L KL + +++ +E R S D+ ++ + A+ + YE+A +F
Sbjct: 373 YNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLF 428
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 91/246 (36%), Gaps = 15/246 (6%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T L+NCYC + A +L + ++ F N V FN L + G K +
Sbjct: 92 TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED---KCRWTTYSNLASIYVK 262
+ LD +Y + +G R ++ + E+ + TYS + K
Sbjct: 152 MAKGYPLDEFSYGSLINGLCK----NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCK 207
Query: 263 AELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPT 317
L AL+ + R D AY+ LI C+ R+ ++ + P
Sbjct: 208 DRLIAD---ALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPD 264
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ ++ +L+ AL K I + F R D+ + ++ + + EA +FN
Sbjct: 265 DYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFN 324
Query: 378 NAKKRA 383
KR
Sbjct: 325 RMVKRG 330
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 118/270 (43%), Gaps = 23/270 (8%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTD----FAVYLDLTAKTNGIAAAEKY 133
+LE C+R R +E + W+ + + F + + ++ + AA +
Sbjct: 118 LLESCIRERR--------VEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169
Query: 134 FNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLR 191
F+ + E N +T+G L+ YCK +T++ L L M+ L N V +N + + + R
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229
Query: 192 LGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED----- 246
G+ + LV +M++ + D +T+ + + + R+F +M E ++
Sbjct: 230 EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM--ELDEYLGLP 287
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP-RDRKAYH-FLISLYCNTSNLDAVN 304
+ TY+ + + K L E A+ + + E ++Y+ +L L + ++A
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAET 347
Query: 305 RVWGILKSTFPPTNTSYLVLLQALAKLNAI 334
+ ++ P+ SY +L+ L KL +
Sbjct: 348 VLKQMIDKGIGPSIYSYNILMDGLCKLGML 377
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 145/370 (39%), Gaps = 36/370 (9%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF-----NGL 137
++ L + G++ A V++ M + + S + + +D K ++ A+ NG+
Sbjct: 333 LQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S A TYG LL+ YC + A +L ++M L N N L +G+ +
Sbjct: 393 SPDA---VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISE 449
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM----------------- 240
L+ +M ++ LD +T + + ++D + M
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509
Query: 241 ---CNECEDKC--RWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISL 293
+ E+ C TYS L + KA F +A+ ++ E+++P D AY+ I
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQP-DSLAYNIFIHH 568
Query: 294 YCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
+C + + RV + K + +Y L+ L N I + +E + S +
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPN 628
Query: 353 MRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNE 412
+ + I+ + E+A + + ++ A F S + + + + D+A
Sbjct: 629 ICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVF--SFKYLIGAFCKVPDFDMAQEV 686
Query: 413 MEAALSEAKQ 422
E A+S Q
Sbjct: 687 FETAVSICGQ 696
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 5/201 (2%)
Query: 51 SALGATGGSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMH 108
+ALG G S G ++ ++E + D++ Y + L K GR+ A + M K+
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCL-PDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQ 556
Query: 109 FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALAL 166
+ +++ K I++A + + + K+ TY +L+ + L
Sbjct: 557 PDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 167 FEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSH 226
++M E N +N G+ E L+++M Q+NI+ + ++ + ++
Sbjct: 617 MDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCK 676
Query: 227 LNDIDGVERVFYEMCNECEDK 247
+ D D + VF + C K
Sbjct: 677 VPDFDMAQEVFETAVSICGQK 697
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 143/353 (40%), Gaps = 42/353 (11%)
Query: 46 LYKRLSALGATGGSVT--GALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWME 103
++ R+ LG T VT +N Y ++GKT +AL+++ M+
Sbjct: 572 VFSRMIELGLTPDCVTYNSVMNTYFIQGKT-------------------ENALDLLNEMK 612
Query: 104 SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE-----YAKNRYTYGALLNCYCKEL 158
S + + + + + KT I EK + L E Y + LL Y +
Sbjct: 613 SYGVMPNMVTYNILIGGLCKTGAI---EKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSR 669
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
+ L + +K+ ++ N + +N L T+ RLG +K ++ +M + IS D +TY
Sbjct: 670 KADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYN 729
Query: 219 VWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
++ Y + ++ + +M TTY+ L L A+ K + E
Sbjct: 730 ALIRGYCTGSHVEKAFNTYSQMLVSGISP-NITTYNALLEGLSTNGLMRDAD---KLVSE 785
Query: 279 MKPR----DRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNA 333
M+ R + Y+ L+S + N D++ ++ F PT +Y VL+Q AK
Sbjct: 786 MRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGK 845
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAY----LQKDMYEEAALIFNNAKKR 382
+ ++ E +R + DV+I + Q +M L + N K+
Sbjct: 846 MRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKK 898
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-- 140
+ +L K GR A M R + +D K AE+ F + +
Sbjct: 313 ISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNL 372
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY ALL+ +CK E A + +KM++ L N V F+++ Y + G K
Sbjct: 373 VPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVE 432
Query: 201 LVNQMKQRNISLDNLTYIVWMQSY 224
++ +M Q NI + Y + + Y
Sbjct: 433 VLRKMVQMNIMPNVFVYAILLDGY 456
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 114/295 (38%), Gaps = 49/295 (16%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+ + + +L++ G + A +I+ + S+ ++ +++ +D K +AA +
Sbjct: 483 IFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEM 542
Query: 138 SE-------YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYL 190
+E A N T G L L ++F +M EL + V +N++ Y
Sbjct: 543 TEKDMQFDVVAYNALTKGLL------RLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYF 596
Query: 191 RLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-------- 242
G+ E L+N+MK + + +TY + + I+ V V +EM
Sbjct: 597 IQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPI 656
Query: 243 --------------------------ECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
+ Y+ L ++ + + +KA + L ++
Sbjct: 657 IHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEM 716
Query: 277 E-EMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALA 329
+ D Y+ LI YC S+++ A N +L S P T+Y LL+ L+
Sbjct: 717 VIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLS 771
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
L K G+ + A E+ + + + + + LD K + AE + +
Sbjct: 350 GLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLP 409
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T+ +++N Y K+ M +A+ + KM ++ + N + L Y R GQ E
Sbjct: 410 NVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFY 469
Query: 203 NQMKQRNISLDNLTYIVWMQS 223
+MK + +N+ + + + +
Sbjct: 470 KEMKSWGLEENNIIFDILLNN 490
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 7/258 (2%)
Query: 75 RKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEK 132
+ + L YC V++L + G+ A I M K+ + V +D K I+ A +
Sbjct: 7 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66
Query: 133 YFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
+F + E + TY LL CK +A +LF M+ + V + L ++ ++
Sbjct: 67 FFETMPE--PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKM 124
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWT 251
Q E L+ M R S +Y + +D ++F EM C+ R T
Sbjct: 125 CQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPD-RVT 183
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGIL 310
+ + + VK L E +L +E D+ + LI C T + +A G+
Sbjct: 184 YNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMA 243
Query: 311 KSTFPPTNTSYLVLLQAL 328
K P ++ VL+ L
Sbjct: 244 KQGCAPDLVTHTVLVSKL 261
>gi|449438488|ref|XP_004137020.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 146
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 35 PTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRH 94
P+P ED L++R+ G S+ L+ ++ EG+ V++ L+ ++ LRKFGR+
Sbjct: 30 PSP---STEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFNQ 86
Query: 95 ALEVIEWMES-RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNC 153
AL++ EW+ + R S D AV K +Y A+LN
Sbjct: 87 ALQLCEWVRNERNQCLSTGDIAV------------------------VKTPLSYNAMLNL 122
Query: 154 YCKELMTERALALFEKMDEL 173
Y E+ L ++M+E+
Sbjct: 123 YAHLGKHEKLAELLKEMEEM 142
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 129/299 (43%), Gaps = 7/299 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-SEYA 141
+ L K G + A+E+ + M+ S + + ++L K + A K FN + S+
Sbjct: 225 IDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKC 284
Query: 142 K-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
K N TY AL+N + +E + E+A +FE++ E + A+N L Y R G P
Sbjct: 285 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAE 344
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ + M+ D +Y + + +Y + + VF EM ++ L S Y
Sbjct: 345 IFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEM-KRLGITPTMKSHMLLLSAY 403
Query: 261 VKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
KA K E + +L E ++P D + +++LY + V ++S T+
Sbjct: 404 SKAGDVAKCEDIVNELHESGLEP-DTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATD 462
Query: 319 TS-YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
S Y +L+ + + ++ F+ ++ D+ + AY +K +Y + IF
Sbjct: 463 ISTYNILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIF 521
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 137/337 (40%), Gaps = 49/337 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL YC + E+A A+F +M + + + +N ++ G P++ + +M
Sbjct: 185 TYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRM 244
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT--TYSNLASIYVKA 263
K+ TY + + + + ++F EM ++ KC+ TY+ L + + +
Sbjct: 245 KRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQ---KCKPNICTYTALVNAFARE 301
Query: 264 ELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSY 321
L EKAE ++L+E +P D AY+ L+ Y ++ FP
Sbjct: 302 GLCEKAEEIFEQLQEDGHEP-DVYAYNALMEAYS---------------RAGFPYGAAEI 345
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
L+Q + C E +SY ++++ AY + ++E+A +F K+
Sbjct: 346 FSLMQHMG----------C----EPDRASY-----NIMVDAYGRGGLHEDAQAVFEEMKR 386
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEE 441
KS + Y S+ D+A + E ++E + P +++ +
Sbjct: 387 LGITPT--MKSHMLLLSAY--SKAGDVA--KCEDIVNELHESGLEPDTFVLNSMLNLYGR 440
Query: 442 EKDVDGAEEFCKVLKSLN-CLDFSAYSLLIKTYIAAG 477
EE ++S D S Y++LI Y AG
Sbjct: 441 LGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAG 477
>gi|449461209|ref|XP_004148334.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Cucumis sativus]
Length = 1085
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 77 DMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
D+ +Y V L K G+ AL++ ++ M + + + + + + A + F
Sbjct: 734 DVFDYSTLVHGLCKGGQMSEALDICVSAKTNGMKLNIICYNIVIKGLCLQSRLIQAFQLF 793
Query: 135 NGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
+ L TYG L++ C+E E A LFE+M NT +N+L Y+R+
Sbjct: 794 DSLERLGLIPTEITYGTLIDSLCREGYLEDARQLFERMIPKGLKPNTHIYNSLIDGYIRI 853
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
GQ E+ L+++++ + D + +++Y D++G F+E NE
Sbjct: 854 GQIEEAFKLLHELRTGAFNPDEFSVSSAIKAYCQKGDMEGALSFFFEFKNE 904
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 121/308 (39%), Gaps = 21/308 (6%)
Query: 69 MEGKTVRKDMLE--YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K +R D + + L K G A V+E M + S + V + K
Sbjct: 283 MVQKGIRPDTISCTILIYGLSKLGNVEKAFGVLERMRKSGLELSSVTYTVIMLGFCKKGK 342
Query: 127 IAAAEKYF---NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
+ A F GL E + + Y L++ C++ +R L ++M+ + V +N
Sbjct: 343 LEEAFSLFEMVKGL-EMEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKSSIVTYN 401
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+ + G+ + L + + D +TY + Y +I G+ +E
Sbjct: 402 TVINGLCKWGRTSEADRL-----SKGLHGDVITYSTLLHGYIQEQNITGI----FETKRR 452
Query: 244 CEDKCRWTTYSNLASIYVKAEL----FEKAELALKKLEEMK-PRDRKAYHFLISLYCNTS 298
ED + + ++ +KA +E A + K++ E+ + YH LI+ YCN
Sbjct: 453 LEDA-GISLDVIMCNVLIKALFMVGAYEDAYILYKRMPEIGLAANSVTYHTLINGYCNIC 511
Query: 299 NLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
+D ++ K + Y +++AL + + + F E + D+ + +
Sbjct: 512 RIDEAFEIFNEFKLASCDSVAVYNSIIKALCREGRGEKAFEVFIELNLNVLTLDVGVCKM 571
Query: 359 IIRAYLQK 366
+IR ++
Sbjct: 572 LIRTIFEE 579
>gi|225430810|ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Vitis vinifera]
Length = 414
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 131/331 (39%), Gaps = 43/331 (12%)
Query: 64 LNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAK 123
+ ++ + K ++ L +RS G ++HAL ME S F L +
Sbjct: 94 IESHKNDPKITQEPYLSTLIRSYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQ 153
Query: 124 TNGIAAAEKYFNGLSE---YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
+ K+F + ++ +YG L+ YC+ ++++A+++ ++M+E V
Sbjct: 154 SKLFDQVPKFFEEIPRRYGVLPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAV 213
Query: 181 AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
F + + GQ ++ + ++M ++ LD Y V + ++H D + V+ + EM
Sbjct: 214 TFTTILDALYKQGQSDRAEKVWHEMAKKGC-LDVGAYNVKIM-FAHGGDPENVKALIDEM 271
Query: 241 CNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL 300
N +KP D +Y++L++ YC + +
Sbjct: 272 SNAG----------------------------------LKP-DTISYNYLMTSYCKSGMV 296
Query: 301 DAVNRVWGILKSTF-PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
D +V+ L+ T P ++ L+ L + + + F++ R D +
Sbjct: 297 DEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHL 356
Query: 360 IRAYLQKDMYEEAALIFNNAKKRANASARFF 390
+ +QK +EA + KK N A F
Sbjct: 357 VEGLVQKKKTKEAKGLIRTVKK--NFPANFL 385
>gi|145517919|ref|XP_001444837.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412270|emb|CAK77440.1| unnamed protein product [Paramecium tetraurelia]
Length = 981
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 136/293 (46%), Gaps = 26/293 (8%)
Query: 70 EGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
+ +T++ D + Y ++ + R AL + E M+ + + F LD K N +
Sbjct: 420 QSQTIQLDEITYNTLIKGCGRKKRLNDALNLFEEMKLIGIKPNRISFNSLLDSCVKCNKM 479
Query: 128 AAAEKYFNGL-SEYA--KNRYTYGALLNCYC------KELMTERALALFEKMDEL-KFLG 177
A +YF + +Y + +TY L+N EL+ RA+ L E++ E +F
Sbjct: 480 NIAWRYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELL--RAITLLEQIQETGQFKP 537
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ + +N+L ++ + +K L +MK + I ++TY + +++Y ND++G ++F
Sbjct: 538 DEILYNSLIDACVKFNEIQKGMELFREMKNKQIEPSSVTYGILIKAYGKQNDLNGAFKIF 597
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISL 293
EM + + TY L V+ + ++ AL+ +++MK P + Y +I
Sbjct: 598 EEM-KQKKIPINDVTYGCLVDACVRNDRLDQ---ALQFIDQMKSQNLPINTVLYTTIIKG 653
Query: 294 YCNTSNLDAVNRVWGILKSTFP---PTNTSYLVLLQALAKLNAIDILKQCFEE 343
+C + + + + ++K + P P +Y LL + K ++ + F+E
Sbjct: 654 FCKLNQTEEAIKYFDLMKQS-PKTYPNLITYNSLLDGMVKNGLLNQADKLFQE 705
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 6/263 (2%)
Query: 118 LDLTAKTNGIAAAEKYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
+D K N I + F + + + TYG L+ Y K+ A +FE+M + K
Sbjct: 546 IDACVKFNEIQKGMELFREMKNKQIEPSSVTYGILIKAYGKQNDLNGAFKIFEEMKQKKI 605
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
N V + L +R + ++ ++QMK +N+ ++ + Y ++ + LN + +
Sbjct: 606 PINDVTYGCLVDACVRNDRLDQALQFIDQMKSQNLPINTVLYTTIIKGFCKLNQTEEAIK 665
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISL 293
F M + TY++L VK L +A+ ++L ++KP D + L+
Sbjct: 666 YFDLMKQSPKTYPNLITYNSLLDGMVKNGLLNQADKLFQELVDSKIKP-DLITFSTLLKG 724
Query: 294 YCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
+C N+ +N I+ P + ++L+A I Q F+++ +
Sbjct: 725 HCRKGNMKRLNETVQIMTGLQISPDESLLQLILEACLNQQQYHIGVQIFDQFCHQIPQST 784
Query: 353 MRLADVIIRAYLQKDMYEEAALI 375
L +I L K + + +L+
Sbjct: 785 QLLLTIIRLHCLDKKLVQAMSLL 807
>gi|449507432|ref|XP_004163031.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Cucumis sativus]
Length = 1061
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 77 DMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
D+ +Y V L K G+ AL++ ++ M + + + + + + A + F
Sbjct: 710 DVFDYSTLVHGLCKGGQMSEALDICVSAKTNGMKLNIICYNIVIKGLCLQSRLIQAFQLF 769
Query: 135 NGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
+ L TYG L++ C+E E A LFE+M NT +N+L Y+R+
Sbjct: 770 DSLERLGLIPTEITYGTLIDSLCREGYLEDARQLFERMIPKGLKPNTHIYNSLIDGYIRI 829
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
GQ E+ L+++++ + D + +++Y D++G F+E NE
Sbjct: 830 GQIEEAFKLLHELRTGAFNPDEFSVSSAIKAYCQKGDMEGALSFFFEFKNE 880
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 121/308 (39%), Gaps = 21/308 (6%)
Query: 69 MEGKTVRKDMLE--YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K +R D + + L K G A V+E M + S + V + K
Sbjct: 283 MVQKGIRPDTISCTILIYGLSKLGNVEKAFGVLERMRKSGLELSSVTYTVIMLGFCKKGK 342
Query: 127 IAAAEKYF---NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
+ A F GL E + + Y L++ C++ +R L ++M+ + V +N
Sbjct: 343 LEEAFSLFEMVKGL-EMEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKSSIVTYN 401
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+ + G+ + L + + D +TY + Y +I G+ +E
Sbjct: 402 TVINGLCKWGRTSEADRL-----SKGLHGDVITYSTLLHGYIQEQNITGI----FETKRR 452
Query: 244 CEDKCRWTTYSNLASIYVKAEL----FEKAELALKKLEEMK-PRDRKAYHFLISLYCNTS 298
ED + + ++ +KA +E A + K++ E+ + YH LI+ YCN
Sbjct: 453 LEDA-GISLDVIMCNVLIKALFMVGAYEDAYILYKRMPEIGLAANSVTYHTLINGYCNIC 511
Query: 299 NLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
+D ++ K + Y +++AL + + + F E + D+ + +
Sbjct: 512 RIDEAFEIFNEFKLASCDSVAVYNSIIKALCREGRGEKAFEVFIELNLNVLTLDVGVCKM 571
Query: 359 IIRAYLQK 366
+IR ++
Sbjct: 572 LIRTIFEE 579
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 2/182 (1%)
Query: 89 FGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-SEYAKNRYTY 147
G+ A+ M +H F LD+ K+N + A L S + + +Y
Sbjct: 149 IGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSY 208
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L N YC + T AL + ++M + V +N + Y R Q ++ +MK+
Sbjct: 209 NILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKK 268
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
R +D ++Y + + ++ +RVF EM E TY+ L ++ K + +
Sbjct: 269 RKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAP-NVATYNALIQVFCKKDSVQ 327
Query: 268 KA 269
A
Sbjct: 328 NA 329
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 9/206 (4%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLN 152
A VI+ M++R + + F++ + + A A FN + +Y ++ + L++
Sbjct: 166 AWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILIS 225
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
C++ A F+ + + KF + + + NL + R G + + +MK I
Sbjct: 226 ILCRKRRASEAQEFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKP 284
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAEL 271
+ TY + + S I VF EM + C+ TY++L I+VKA EK
Sbjct: 285 NVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNS--ITYNSLMRIHVKAGRTEKVLQ 342
Query: 272 ALKKLEEM--KPRDRKAYHFLISLYC 295
+++ + +P D Y+FLI +C
Sbjct: 343 VYNQMKRLGCEP-DTVTYNFLIETHC 367
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Query: 57 GGSVTGALNAYI-MEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
G A++A+ ME + D + + + + R R A E E+ +S K F D
Sbjct: 195 AGLAAEAIHAFNRMEDYNCKPDKIAFSIL-ISILCRKRRASEAQEFFDSLKDKFE-PDVI 252
Query: 116 VYLDLT---AKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKM 170
VY +L + I+ AE+ F + + N YTY +++ C+ RA +F +M
Sbjct: 253 VYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEM 312
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ N++ +N+L ++++ G+ EKV + NQMK+ D +TY ++++
Sbjct: 313 LDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETH 366
>gi|449458793|ref|XP_004147131.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g19280-like [Cucumis sativus]
gi|449503522|ref|XP_004162044.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g19280-like [Cucumis sativus]
Length = 532
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 5/213 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y L++ Y K+ +A L + M + V +N L + G ++ + +++++
Sbjct: 316 VYNILMDAYGKKGYMHKAFKLLDMMRSTNVTPDVVTYNTLINGLVMRGFLQEAKDILDEL 375
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+R S+D +TY + YS + + ++Y M C T S L S Y + +
Sbjct: 376 IRRGFSVDVVTYTNIIHGYSTRGNFEEAFLLWYHMAENCVTP-DVVTCSALLSGYCREKR 434
Query: 266 FEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYL 322
++A K+ + +KP D Y+ LI +C+ N+D N V +++S+ P N ++
Sbjct: 435 MDEANALFCKMLDIGLKP-DLILYNTLIHGFCSVGNVDEGCNLVKKMIESSIIPNNVTHR 493
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
L+ K D ++ + + +YD+++
Sbjct: 494 ALVLGFQKKRVTDPIQSATSKLQEILIAYDLQI 526
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 124/315 (39%), Gaps = 22/315 (6%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T ++NCY KE M AL L ++M L + + ++ L+ Q L+ +M
Sbjct: 186 TCSMMVNCYIKERMVTSALILIDQMKHLNIFPSIWVYKSVIKALLQTNQSGMAWDLLEEM 245
Query: 206 KQRNISLD-NLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
++ +L ++ ++++ D+ V +C K + + +
Sbjct: 246 HRQEGNLGKGWKVLLELRNFGSKPDVVDYTTVINSLC-----KVSLLKEATALDVEMAEV 300
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLV 323
+FEK +E +KP D Y+ L+ Y + ++ +++ST P +Y
Sbjct: 301 MFEKM-----IVEGLKP-DVVVYNILMDAYGKKGYMHKAFKLLDMMRSTNVTPDVVTYNT 354
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
L+ L + K +E R S D+ II Y + +EEA L++ + +
Sbjct: 355 LINGLVMRGFLQEAKDILDELIRRGFSVDVVTYTNIIHGYSTRGNFEEAFLLWYHMAE-- 412
Query: 384 NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEK 443
N + + + Y R +++D E A + +P + +T F
Sbjct: 413 NCVTPDVVTCSALLSGYCREKRMD----EANALFCKMLDIGLKPDLILYNTLIHGFCSVG 468
Query: 444 DVDGAEEFCKVLKSL 458
+VD E C ++K +
Sbjct: 469 NVD---EGCNLVKKM 480
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 15/260 (5%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+L C R G + A + + M +R++ + LD K + A F L
Sbjct: 345 LLAVCSRG----GLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLA---FEIL 397
Query: 138 SEYAKNR-----YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
++ R +Y +++ + K + AL LF +M L + V++N L ++Y ++
Sbjct: 398 AQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKV 457
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT 252
G+ E+ ++ +M I D +TY + Y D V++VF EM E T
Sbjct: 458 GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKRE-HVLPNLLT 516
Query: 253 YSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGIL 310
YS L Y K L+++A ++ + R D Y LI C + AV+ + +
Sbjct: 517 YSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 311 KSTFPPTNTSYLVLLQALAK 330
K P +Y ++ A +
Sbjct: 577 KEGISPNVVTYNSIIDAFGR 596
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 125/317 (39%), Gaps = 26/317 (8%)
Query: 177 GNTV-AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN-DIDGVE 234
GNTV AF+ L + Y R G E+ + N MK+ + + +TY + + + V
Sbjct: 265 GNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA 324
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA-----ELALKKLEEMKPRDRKAYHF 289
+ F EM C R T+++L ++ + L+E A E++ +++E+ D +Y+
Sbjct: 325 KFFDEMQRNCVQPDR-ITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQ----DVFSYNT 379
Query: 290 LISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRC 348
L+ C +D + + + P SY ++ AK D F E
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLN 439
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK---SRESFMIYYLRSRQ 405
+ D + ++ Y + EEA I R AS K + + + Y + +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDIL-----REMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 406 LDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFS 464
D E++ +E K+ H P +T T + + A E + KS D
Sbjct: 495 YD----EVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVV 550
Query: 465 AYSLLIKTYIAAGKLAS 481
YS LI G + S
Sbjct: 551 LYSALIDALCKNGLVGS 567
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 133/347 (38%), Gaps = 23/347 (6%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY ++ CK + A L +KMDE K L TV + L L+ G+ ++ ++ QM
Sbjct: 44 TYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQM 103
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT--TYSNLASIYVKA 263
++ S TY V + S ++ R+F +M + CR Y+ L K+
Sbjct: 104 VEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLG---NGCRPDAFVYTALIKGLCKS 160
Query: 264 ELFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG--ILKSTFPP 316
E+A E +K D Y LI C + +V+ ++ F P
Sbjct: 161 GKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIP 220
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y ++ L KL ++ + F E +R D +I +++ M +A ++
Sbjct: 221 DAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVY 280
Query: 377 NNAKKRANASARFFKSRESFMIYYLRSRQLDLA--LNEMEAALSEAKQFHWRPMQVTVDT 434
+ S + Y + L A + E A ++ VT
Sbjct: 281 RQMLQSGTVV--------STVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 332
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKLA 480
F E +V A E + + C + +Y+++I+ AGKLA
Sbjct: 333 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLA 379
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 105/265 (39%), Gaps = 28/265 (10%)
Query: 110 SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALF 167
S + + LD K +A A F + E TY AL++ +C E A+ LF
Sbjct: 291 STVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELF 350
Query: 168 EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHL 227
+M + N V++N + R G+ K ++ QR + D T+ ++
Sbjct: 351 RRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQR 410
Query: 228 NDI--DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA---ELALKKLEEMKPR 282
D DGVE +F M ++ T NL S + + +A E+AL+ EM R
Sbjct: 411 LDTVSDGVE-LFESMVSQ-------GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSR 462
Query: 283 ----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILK 338
D ++ LI C +D V+ L+ P SY LL D L
Sbjct: 463 GVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLL---------DGLS 513
Query: 339 QCFEEWESRCSSYDMRLADVIIRAY 363
+C E+R S+ M+L R Y
Sbjct: 514 RCERMEEARLLSFHMKLQGCAPRHY 538
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 105/255 (41%), Gaps = 12/255 (4%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + TY AL++ + K M +A ++ +M + + +TV +N + + G+ +
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 312
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLAS 258
M++R +TY M + ++ +F M + CE +Y+ +
Sbjct: 313 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN--LVSYNIIIR 370
Query: 259 IYVKAELFEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP- 315
+A KA +KL + + P Y F L+ LD V+ + +S
Sbjct: 371 GLCRAGKLAKAYFYFEKLLQRRLCP---DVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427
Query: 316 ---PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P SY +L+ + + +++ + F E SR + D+ + + +IR +EA
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487
Query: 373 ALIFNNAKKRANASA 387
+F ++R+ A
Sbjct: 488 LEVFRELERRSAPDA 502
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 86/436 (19%), Positives = 155/436 (35%), Gaps = 59/436 (13%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF-----NGL 137
V L K GR A+ V+E M + + + V +D +K + A + F NG
Sbjct: 84 VDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 143
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMD-------------------------- 171
A + Y AL+ CK E A AL+++ +
Sbjct: 144 RPDA---FVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAG 200
Query: 172 --------------ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
E F+ + V + ++ +LG+ E+ ++M+ R D +TY
Sbjct: 201 RILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 260
Query: 218 IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE 277
+ + I RV+ +M TY+ + KA +A +E
Sbjct: 261 AALIDGFMKAKMIPKAHRVYRQMLQS-GTVVSTVTYNIILDGLCKAGRVAEAYATFLAME 319
Query: 278 EMK-PRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAID 335
E Y L+ +C+ N+ A ++ +L P SY ++++ L + +
Sbjct: 320 ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLA 379
Query: 336 ILKQCFEEWESRCSSYDMRLADVIIRAYLQK-DMYEEAALIFNNAKKRANASARFFKSRE 394
FE+ R D+ + + Q+ D + +F + + + S
Sbjct: 380 KAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPN--LHSYS 437
Query: 395 SFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV 454
M R+ L++AL +S P V +T R+ VD A E +
Sbjct: 438 ILMDGICRAGGLEVALEIFREMVSRGVA----PDVVVFNTLIRWLCIAGRVDEALEVFRE 493
Query: 455 LKSLNCLD-FSAYSLL 469
L+ + D +S +SLL
Sbjct: 494 LERRSAPDAWSYWSLL 509
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 11/247 (4%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ ++ TY ALL+ Y K T+ A+ + +M+ + V +N+L + Y R G ++
Sbjct: 135 FVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAM 194
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLAS 258
L NQM + I+LD TY + + + RVF EM C K T++ L
Sbjct: 195 ELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGC--KPNICTFNALIK 252
Query: 259 IYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-ST 313
++ F AE+ +K EE+K D ++ L++++ V+ V+ +K +
Sbjct: 253 MHGNRGKF--AEM-MKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 309
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
F P +Y L+ A ++ + D ++ + D+ + ++ A + ++E++
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSE 369
Query: 374 LIFNNAK 380
IF K
Sbjct: 370 KIFAEMK 376
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 133/341 (39%), Gaps = 51/341 (14%)
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDE 172
AV + + K ++ A N L + + + Y Y +L+ A+ +F+KM+E
Sbjct: 2 AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 173 LKFLGNTVAFNNLSTMYLRLGQP-EKVRPLVNQMKQRNISLDNLTYIVWMQ--------- 222
+ +N + +Y ++G P K++ L MK + D TY +
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121
Query: 223 -------------------SYSHLNDIDGVER-------VFYEM-CNECEDKCRWTTYSN 255
+Y+ L D+ G R V EM N C TY++
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSI--VTYNS 179
Query: 256 LASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST- 313
L S Y + L ++A EL + +E D Y L+S + ++ RV+ +++
Sbjct: 180 LISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAG 239
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P ++ L++ + + FEE ++ C D+ + ++ + Q M E +
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVS 299
Query: 374 LIFNNAKKRANASARFFKSRESF---MIYYLRSRQLDLALN 411
+F K+ A F R+++ + Y R D A++
Sbjct: 300 GVFKEMKR-----AGFVPERDTYNTLISAYSRCGSFDQAMD 335
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 128/299 (42%), Gaps = 7/299 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-SEYA 141
+ L K G + A+E+ E M+ + S + + ++L K + A K F+ + S+
Sbjct: 175 IDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKC 234
Query: 142 K-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
K N T+ AL+N + +E + E+A +FE++ E + A+N L Y R G P
Sbjct: 235 KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAE 294
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ + M+ D +Y + + +Y + + VF E+ ++ L S Y
Sbjct: 295 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVF-EVMKRLGITPTMKSHMLLLSAY 353
Query: 261 VKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPT 317
+A K E + ++ + +KP D + +++LY + + V + K +P
Sbjct: 354 SRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPAD 412
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++Y +L+ + +++ F +R D+ I AY ++ Y +F
Sbjct: 413 ISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVF 471
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 140/340 (41%), Gaps = 49/340 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL YC + E+A A+F +M + F + V +N ++ G +K + +M
Sbjct: 135 TYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERM 194
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT--TYSNLASIYVKA 263
K+ TY + + Y + +VF+EM ++ KC+ T++ L + + +
Sbjct: 195 KRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQ---KCKPNICTFTALVNAFARE 251
Query: 264 ELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSY 321
L EKAE ++L+E ++P D AY+ L+ Y ++ FP
Sbjct: 252 GLCEKAEEIFEQLQEAGLEP-DVYAYNALMEAYS---------------RAGFPYGAAEI 295
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
L+Q + C E +SY ++++ AY + ++E+A +F K+
Sbjct: 296 FSLMQHMG----------C----EPDRASY-----NIMVDAYGRAGLHEDAQAVFEVMKR 336
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEE 441
KS + Y R+ + + + E +++ + +P +++ +
Sbjct: 337 LGITPT--MKSHMLLLSAYSRAGK----VAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGR 390
Query: 442 EKDVDGAEEFCKVL-KSLNCLDFSAYSLLIKTYIAAGKLA 480
+ EE + K D S Y++LI Y AG A
Sbjct: 391 LGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFA 430
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 14/325 (4%)
Query: 58 GSVTGALN-AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G ++ AL + +M+ + V+ ++ Y + K + +A V E M M D
Sbjct: 496 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK---PDV 552
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRY-----TYGALLNCYCKELMTERALALFEK 169
+Y ++ + G+ ++ + E K R+ T+ +++ Y K R+L +F+
Sbjct: 553 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 612
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M + FN L + Q EK ++++M +S + TY MQ Y+ + D
Sbjct: 613 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 672
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYH 288
F + NE D TY L K+ + A K++ PR+ Y+
Sbjct: 673 TGKAFEYFTRLQNEGLD-VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 731
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI + ++ +A + + + K P +Y + A +K ++ Q EE E+
Sbjct: 732 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 791
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEA 372
+++ +I+ + + + E+A
Sbjct: 792 GVKPNIKTYTTLIKGWARASLPEKA 816
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 39/310 (12%)
Query: 47 YKRLSALGATGGS--VTGALNAYIMEGKTVRKDMLE--YCVRSLRKFGRYRHALEVIEWM 102
++R+ A G T S T ++AY V +DM E CVR +++ G
Sbjct: 330 FERMRARGITPTSRIYTSLIHAY-----AVGRDMDEALSCVRKMKEEG------------ 372
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMT 160
+ S ++V + +K AA+ +F+ K N YG ++ +C+
Sbjct: 373 ----IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 428
Query: 161 ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVW 220
ERA AL +M+E ++ + Y + +K + ++K+ + +TY
Sbjct: 429 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 488
Query: 221 MQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL--EE 278
+ Y+ + I V M E K TYS + + +VK + + A + + E
Sbjct: 489 INLYTKVGKISKALEVSRVMKEEGV-KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 547
Query: 279 MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAK------- 330
MKP D Y+ +IS +C N+D A+ V + K PT +++ ++ AK
Sbjct: 548 MKP-DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 606
Query: 331 LNAIDILKQC 340
L D++++C
Sbjct: 607 LEVFDMMRRC 616
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+TY ALL CK + ALA+ ++M N+ +N L + R G + L+ Q
Sbjct: 693 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 752
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK+ + D TY ++ + S D++ + EM K TY+ L + +A
Sbjct: 753 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARAS 811
Query: 265 LFEKAELALKKLEEM--KPRDRKAYHFLIS 292
L EKA ++++ M KP D+ YH L++
Sbjct: 812 LPEKALSCYEEMKAMGIKP-DKAVYHCLLT 840
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ Y K + AL LF +M + V++N L ++Y +LG+ E+ +
Sbjct: 246 NVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVC 305
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+M+ I D +TY + Y + V+RVF EM E TYS L +Y K
Sbjct: 306 KEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAE-RIFPNLLTYSTLIDVYSK 364
Query: 263 AELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
L+++ A++ E K KA Y LI C ++ AV+ + + K P
Sbjct: 365 GGLYQE---AMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPN 421
Query: 318 NTSYLVLLQALAKLNAID 335
+Y ++ A + ++
Sbjct: 422 VVTYNSIIDAFGRSGIVE 439
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 102/253 (40%), Gaps = 41/253 (16%)
Query: 136 GLSEYAKNRYTYGALLN-CYCKELMTERALALFEKMD---ELKFLG---NTVAFNNLSTM 188
G S N TY A+++ C + RA +F++M+ E+ + G + +N L
Sbjct: 162 GDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDA 221
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC 248
+ GQ + ++++M +++I + +TY + Y+ +D +F EM
Sbjct: 222 VCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLD 281
Query: 249 RWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG 308
R +Y+ L SIY K FE+A K++E G
Sbjct: 282 R-VSYNTLLSIYAKLGRFEEALNVCKEMESS----------------------------G 312
Query: 309 ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDM 368
I K +Y LL K + +K+ FEE ++ ++ +I Y + +
Sbjct: 313 IKKDA-----VTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGL 367
Query: 369 YEEAALIFNNAKK 381
Y+EA +F KK
Sbjct: 368 YQEAMEVFREFKK 380
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 111/274 (40%), Gaps = 43/274 (15%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLN 152
A+EV + M+ + + F + +++ K ++ K FN + N TY AL+N
Sbjct: 264 AVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVN 323
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
+ +E + E+A +FE+M + + A+N L Y R G P+ + + M+
Sbjct: 324 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP 383
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
D +Y + + +Y +A L E AE
Sbjct: 384 DRASYNILVDAYG------------------------------------RAGLHEDAEAV 407
Query: 273 LKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALA 329
++L++ M P K++ L++ + + N V L KS P + +L A A
Sbjct: 408 FEELKQRGMSP-TMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYA 466
Query: 330 KLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
+ +D +++ F E R + D+ +V + AY
Sbjct: 467 RAGRLDDMERLFAAMERRGDA-DVGTYNVAVNAY 499
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 115/277 (41%), Gaps = 7/277 (2%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMD 171
+A+ L + AE + + E+ N Y A L+ K TE+A+ ++++M
Sbjct: 213 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK 272
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+ NT F + +Y + QP + N+MK + TY + +++ +
Sbjct: 273 RERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCE 332
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYHF 289
E VF EM + + Y+ L Y +A L + A ++ M +P DR +Y+
Sbjct: 333 KAEEVFEEMQQAGHEPDVY-AYNALMEAYSRAGLPQGASEIFSLMQHMGCEP-DRASYNI 390
Query: 290 LISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRC 348
L+ Y + V+ LK PT S+++LL A A+ ++ +
Sbjct: 391 LVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSG 450
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA 385
+ D + ++ AY + ++ +F ++R +A
Sbjct: 451 LTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDA 487
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 3/220 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL YC RA + +M E N +N L+ EK + +M
Sbjct: 212 TYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRM 271
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ + T+ + + Y +VF EM K TY+ L + + + L
Sbjct: 272 KRERCRANTETFTLMINVYGKAKQPMSSMKVFNEM-KSIGCKPNICTYTALVNAFAREGL 330
Query: 266 FEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLV 323
EKAE +++++ D AY+ L+ Y + ++ +++ P SY +
Sbjct: 331 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNI 390
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
L+ A + + + FEE + R S M+ +++ A+
Sbjct: 391 LVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAH 430
>gi|302801862|ref|XP_002982687.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
gi|300149786|gb|EFJ16440.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
Length = 541
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 180/457 (39%), Gaps = 67/457 (14%)
Query: 35 PTPFPTG----NEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFG 90
P P +G + D ++K+ A + + AL + EG V +D++ + L
Sbjct: 98 PIPPSSGTLQSHIDAIWKK--AEPSNYRDIVAALKDWQSEGNLVTRDVIYKLIIRLHARM 155
Query: 91 RYRHALEVIEWMESRKMHFSYTDF--AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYG 148
Y ++++ W+ K F TDF V +D + + FN + + K Y
Sbjct: 156 FYFQGMKLMNWVIVEK-PFQLTDFDHLVRMDFHTRELKVDKVLTCFNRIQD--KTETCYV 212
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
LL + ERAL + ++M EL + N ++N + MYLR+G ++ + + ++K +
Sbjct: 213 LLLQAFATAHRKERALDVLKQMKELVLITNPYSYNLVIAMYLRMGLIDEAKEMFAELKDK 272
Query: 209 -NISLDNLTYIVWMQSYSHL--NDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
N++ D TY+ ++S L +D++ F+ ++ W
Sbjct: 273 SNVAPDAFTYLNLLKSRDALGMDDLEDTIEEFFLDVDKIPTGFEWRN------------- 319
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLL 325
LI LY V R+W K SY L
Sbjct: 320 ------------------------LIRLYGAMGKKKDVERLWREQKRVAEYMPESY--FL 353
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLAD----VIIRAYLQKDMYEEAALIFNNAKK 381
A+ +KQ FEE + + + +L++ +++ Y + +A AKK
Sbjct: 354 AAIESFGMNGEMKQ-FEEICKQLEAQNQKLSERQCFTMLKVYCMNGLMNDAE---RTAKK 409
Query: 382 RANASARF-FKSRESFMIYYLRSRQLDLALNEMEAALSE--AKQFHWRPMQVTVDTFFRF 438
+ FK + Y+ Q A + A + AK F P+ VTV T
Sbjct: 410 MEELRYKLGFKGYHYLVSGYVNRHQFVKATEKFSEAEEKGLAKGFK-NPLFVTVLTLLEA 468
Query: 439 FEEEKDVDGAEEFC-KVLKSLN-CLDFSAYSLLIKTY 473
+ +K+++ AEE KVLK+ + D ++ L+K Y
Sbjct: 469 YAGKKELEKAEEMVEKVLKTKHYPYDIRLFNALLKVY 505
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 126/315 (40%), Gaps = 15/315 (4%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA 130
G + R L + +L GR A + E M+ + + L K + A
Sbjct: 286 GLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDA 345
Query: 131 EKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
E + + S + + TY L++ Y E A + ++M+ + N+ F+ +
Sbjct: 346 EFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILAS 405
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC--ED 246
Y G+ +K ++ +MK + D Y V + ++ + +D F +M +E D
Sbjct: 406 YRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPD 465
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD----RKAYHFLISLYCNTSNLDA 302
W T L + KAEL E+AE + EEM + ++ +I+ + D
Sbjct: 466 TVTWNT---LIDCHCKAELHERAE---ELFEEMMEKGFSPCVTTFNIMINSFGEQERWDD 519
Query: 303 VNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
V + G ++S P +Y L+ K +C E+ +S + + +I
Sbjct: 520 VKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALIN 579
Query: 362 AYLQKDMYEEAALIF 376
AY QK + E+A F
Sbjct: 580 AYAQKGLSEQAVNAF 594
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 17/269 (6%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG-LSE-YAK 142
S R G ++ + +V++ M++ + + V +D K + + A F+ LSE
Sbjct: 405 SYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQP 464
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ T+ L++C+CK + ERA LFE+M E F FN + + + + V+ L+
Sbjct: 465 DTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLM 524
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED------KCRWTTYSNL 256
M+ SL L +V +Y+ L DI G F + ED K T Y+ L
Sbjct: 525 GNMR----SLGLLPNVV---TYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNAL 577
Query: 257 ASIYVKAELFEKAELA--LKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF 314
+ Y + L E+A A L + + +KP + + + + +A + + + ++
Sbjct: 578 INAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDL 637
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEE 343
P +Y L++AL +++ + + +EE
Sbjct: 638 KPDVVTYTTLMKALIRVDKFNKVPSVYEE 666
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 101/220 (45%), Gaps = 3/220 (1%)
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A A+FE+M + T A+N L Y++ G + +V++M++ +S D TY + +
Sbjct: 310 AEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLID 369
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR 282
+YS+ + V EM + LAS + E ++K+ LK+++ R
Sbjct: 370 AYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGE-WQKSFQVLKEMKNSGVR 428
Query: 283 -DRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
DR Y+ +I + S LD A++ +L P ++ L+ K + ++
Sbjct: 429 PDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEEL 488
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
FEE + S + +++I ++ +++ +++ + N +
Sbjct: 489 FEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMR 528
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K + ++ Y V K G+ A ++ M + + + F + K +
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I A + F + + YT+ +L++ C+ + AL L M + NTV +N
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM---- 240
L +LR G+ ++ R LVN+M + LD +TY ++ ++D +F +M
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 241 -------CNECEDK-CR----------------------WTTYSNLASIYVKAELFEKAE 270
CN + CR T+++L + +A E
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648
Query: 271 LALKKLE-EMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQAL 328
+KL+ E P D Y+ L+S C + DA + ++ F P + ++ +LLQ+L
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
Query: 329 AKLNAID 335
+D
Sbjct: 709 VPQETLD 715
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 114/298 (38%), Gaps = 12/298 (4%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGA 149
++ A V M SRK+ + F V + N + +A ++++ N Y
Sbjct: 192 HKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQT 251
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
L++ K AL L E+M + + + FN++ + + + +VN+M R
Sbjct: 252 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 311
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ D++TY M + +D + +FY + K ++ L +V + A
Sbjct: 312 FTPDDITYGYLMNGLCKIGRVDAAKDLFYRI-----PKPTSVIFNTLIHGFVTHGRLDDA 366
Query: 270 ELALKKLEE---MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLL 325
+ L + + P D Y+ LI Y + A+ + + P SY +L+
Sbjct: 367 KAVLSDMVTSYGIVP-DVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILV 425
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
KL ID E + + + +I A+ ++ EA IF ++
Sbjct: 426 DGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 483
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 77/403 (19%), Positives = 166/403 (41%), Gaps = 14/403 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+++L K + R A+ ++E M S + T F + + + A + + EY
Sbjct: 210 IKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGC 269
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
T L+N +CK+ ++AL+ ++ F + +N L ++G +
Sbjct: 270 PCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAME 329
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN-ECEDKCRWTTYSNLASI 259
+V+ M + D TY + L +I+ ++ +M + +C TY+ + S
Sbjct: 330 VVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNA--VTYNAIISS 387
Query: 260 YVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPT 317
K ++A E+A + D ++ LI C +SN + ++ +K P
Sbjct: 388 LCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPD 447
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y +L+ +L ++ +E E + ++ + + +I + + EEA IF+
Sbjct: 448 EFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFD 507
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
+ +R + + + +S++++ A M+ + E RP + T ++
Sbjct: 508 EME--LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG----LRPDKFTYNSLLT 561
Query: 438 FFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
F + D+ A + + + S C D Y+ LI AG++
Sbjct: 562 HFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRV 604
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 139/364 (38%), Gaps = 49/364 (13%)
Query: 58 GSVTGALNAYIMEG--KTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTD 113
G + AL ++I E + R D Y V L K G +HA+EV++ M +
Sbjct: 287 GRIDQAL-SFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYT 345
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMD 171
+ + K I A K + + + + N TY A+++ CKE + A + +
Sbjct: 346 YNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLT 405
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS-------- 223
L + FN+L + L +MK + D TY + + S
Sbjct: 406 SKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLE 465
Query: 224 --------------------YSHLND-------IDGVERVFYEMCNECEDKCR-WTTYSN 255
Y+ L D I+ E +F EM E + R TY+
Sbjct: 466 EALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM--ELQGVSRDSVTYNT 523
Query: 256 LASIYVKAELFEKAELALKK--LEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKS 312
L K++ E A + + +E ++P D+ Y+ L++ +C T ++ A + V + S
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRP-DKFTYNSLLTHFCKTGDIKKAADIVQTMTSS 582
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y L+ L K + + + + + + +I+A +++ EA
Sbjct: 583 GCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEA 642
Query: 373 ALIF 376
+F
Sbjct: 643 MRLF 646
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 21/249 (8%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA-----EKYFNGLSEYAKNRYT 146
++ A+++ E M+ + + + +D + + A E NG A+N
Sbjct: 429 HKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGC---ARNVVI 485
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y L++ +CK E A +F++M+ ++V +N L + + E L++QM
Sbjct: 486 YNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMI 545
Query: 207 QRNISLDNLTYIVWMQSYSHLNDI----DGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ D TY + + DI D V+ + CN TY+ L S K
Sbjct: 546 MEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNP-----DIVTYATLISGLCK 600
Query: 263 AELFEKAELALKKLEEMKPR--DRKAYHFLI-SLYCNTSNLDAVNRVWGILKSTFPPTNT 319
A + A L+ + +MK AY+ +I +L+ +A+ +L + PP
Sbjct: 601 AGRVQVASRLLRSI-QMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAI 659
Query: 320 SYLVLLQAL 328
+Y ++ + L
Sbjct: 660 TYKIVYRGL 668
>gi|356536414|ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 553
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 129/300 (43%), Gaps = 19/300 (6%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-----SEYAK 142
K GRY +A + M+ S + + L + N AE+ F+ L S
Sbjct: 182 KGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKYREAEELFDNLLNDENSPLKP 241
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
++ + ++ Y K E+A F M E TV +N+L + ++V +
Sbjct: 242 DQKMFNMMIYMYKKAGSYEKARKTFALMAERGIQQTTVTYNSLMSFETDY---KEVSNIY 298
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+QM++ ++ D ++Y + + +Y + VF EM + R Y+ L +
Sbjct: 299 DQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGVRPTR-KAYNILLDAFSI 357
Query: 263 AELFEKAELALKKLEEMKPRDRK-----AYHFLISLYCNTSNLDAVNRVWG-ILKSTFPP 316
+ + E+A+ K + RDR +Y ++S Y N +++ + + +++ F P
Sbjct: 358 SGMVEQAQTVFKSMR----RDRYFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQDDFEP 413
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y L++ AK+N ++++ + +EE R + + I+ AY + ++ A F
Sbjct: 414 NVVTYGTLIKGYAKINDLEMVMKKYEEMLVRGIKANQTILTTIMDAYGKSGDFDSAVHWF 473
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y L++ Y K E ALA+FE+M + A+N L + G E+ + + M
Sbjct: 312 SYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQAQTVFKSM 371
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ D +Y + +Y + +D++G E+ F + + + + TY L Y K
Sbjct: 372 RRDRYFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQD-DFEPNVVTYGTLIKGYAK--- 427
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISL----YCNTSNLDAVNRVWGILKST-FPPTNTS 320
E+ +KK EEM R KA +++ Y + + D+ + ++S PP +
Sbjct: 428 INDLEMVMKKYEEMLVRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKA 487
Query: 321 YLVLL 325
VLL
Sbjct: 488 KNVLL 492
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 20/221 (9%)
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
R Y LL+ + M E+A +F+ M ++ + ++ + + Y+ E
Sbjct: 345 RKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYVNADDMEGAEKFFK 404
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
++ Q + + +TY ++ Y+ +ND++ V + + EM K T + + Y K+
Sbjct: 405 RLIQDDFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLVRG-IKANQTILTTIMDAYGKS 463
Query: 264 ELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYL 322
F+ A K++E P D+KA + L+SL + N + G F N+
Sbjct: 464 GDFDSAVHWFKEMESNGIPPDQKAKNVLLSLPKTDEEREEANELVG----HFSENNS--- 516
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
L+K+N I+K E+ E++ +D +L RAY
Sbjct: 517 -----LSKVNG--IVKLVDEDEENKYEYFDAQLE----RAY 546
>gi|195613918|gb|ACG28789.1| leaf protein [Zea mays]
Length = 637
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+G ++ YC+E E AL ++M + + N V FN L +L V ++ M
Sbjct: 279 TWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLM 338
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ I D +TY + ++S L + VF +M E + YS LA +V+A+
Sbjct: 339 KKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMI-EAGIEPDPQVYSILAKGFVRAQQ 397
Query: 266 FEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNRVW 307
EKAE L ++ + P + + +IS +C+ +++++ RV+
Sbjct: 398 PEKAEDLLLQMSHLGLCP-NVVTFTTVISGWCSVADMESAMRVY 440
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 15/211 (7%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
GR AL ++ M+ + F L N +AA K + ++ + TY
Sbjct: 291 GRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMKKFGIKPDIVTY 350
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
LN + + + +F+KM E + ++ L+ ++R QPEK L+ QM
Sbjct: 351 SHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSH 410
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI------YV 261
+ + +T+ + + + D++ RV+ +M C+ Y NL + Y
Sbjct: 411 LGLCPNVVTFTTVISGWCSVADMESAMRVYDKM-------CKSGVYPNLRTFETLIWGYS 463
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLIS 292
+ + KAE L+ + E + +++ + LI+
Sbjct: 464 EQKQPWKAEEVLQMMRETGVKPKQSTYCLIA 494
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 117/302 (38%), Gaps = 10/302 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
VR+L K R + A EV ME + +D AK A K + + A
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
TYG L+N CK ERA LF M F N+V + +L + + G+ ++
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
L ++M + D +T+ V + + + + F EM C K TY+ +
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGC--KPNVVTYTTIIQG 409
Query: 260 YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPP 316
K A +K + P D Y L+ +C LD ++ L K + P
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFP-DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP 468
Query: 317 TNTSYLVLLQALAKLNAID-ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
Y L++ L +++ L FE+ ++ + D L II + +EA I
Sbjct: 469 NLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRI 528
Query: 376 FN 377
F
Sbjct: 529 FQ 530
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 13/265 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE------ 139
+R F R R A + + E K D +L L EK F E
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGF 220
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+R + A++ K + A +F +M++ F + +A+N + + G ++
Sbjct: 221 VPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEAL 280
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+++ M + +TY + + S ++ E +F M + Y++L
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS-GFRPNSVIYTSLIHG 339
Query: 260 YVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
+ K+ ++A ++ E R D + +I C + N + A +++ P
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399
Query: 318 NTSYLVLLQALAKL----NAIDILK 338
+Y ++Q L+K+ NA I+K
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMK 424
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 133/344 (38%), Gaps = 11/344 (3%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ + +TY L+N E + A+ E+M + NT +FN L + R + +
Sbjct: 115 FQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAV 174
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
MK++ D T+++ + + VF+EM ++ +
Sbjct: 175 TCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRT 234
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
+KA+ ++A ++E+ P D AY+ +I + +A+ + +L PT
Sbjct: 235 LLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPT 294
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y +L+ +L K ++ ++ F + + + +I + + +EA +F+
Sbjct: 295 EVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354
Query: 378 NAKKRANASARFFKSRESFMIYYL-RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
+ A R + MI L +S + A E E + +P VT T
Sbjct: 355 ---EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE----EMMRGGCKPNVVTYTTII 407
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKL 479
+ + V A K + + C D Y L+ + G+L
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
>gi|255576798|ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531275|gb|EEF33118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 128/303 (42%), Gaps = 8/303 (2%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+L C+++ K G Y L+ ++ ++ + + L + A N AE YF+ +
Sbjct: 222 LLSGCIKA--KDG-YSKTLDFVQELKYNGLQMDTVIYGTILAVCASHNRCEEAESYFSQM 278
Query: 138 SE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
+ N + Y +LLN Y ++A L + M L + N V + L +Y+R G
Sbjct: 279 KNEGHLPNVFHYSSLLNAYASSGNYKKAEELVQDMKSLGLVPNKVIWTTLLKVYVRGGLF 338
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
EK + L+ +++ + D + Y + M S +D F EM E K YS
Sbjct: 339 EKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEM-KEKNVKSDGYAYSI 397
Query: 256 LASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKS-T 313
+ S Y + L E+A+ K+ E + D + ++ YC ++++V + +
Sbjct: 398 MISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTMRKMDELA 457
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P+ ++ +L++ K + Q E+ + + L ++I + Y EA
Sbjct: 458 ISPSYCTFHILIKYFCKQKLYLLAYQTMEDMHRKGHQPEEELCSMLIFHLGKAKAYTEAF 517
Query: 374 LIF 376
++
Sbjct: 518 SVY 520
>gi|357110688|ref|XP_003557148.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Brachypodium distachyon]
Length = 1038
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 4/241 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N++TY ++ Y KE + E A+ ++ KM +F+ ++ L ++ R G+ E+ L
Sbjct: 279 NQFTYTIVIGSYVKESLLEEAMNVWRKMKRSRFVPEEATYSGLISLSARHGRGEQALGLY 338
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+M+ I N T + Y D +F EM + Y L IY K
Sbjct: 339 EEMRAHGIVPSNYTCASLLSLYYKTEDYSKALSLFAEM-EQSRIVPDEVIYGILVRIYGK 397
Query: 263 AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTS 320
L+E A+ ++++ D + Y + ++ N N D +V ++ P+ S
Sbjct: 398 VGLYEDAQCTFEEIDRADLLSDEQTYVAMAQVHMNAGNYDRALQVLDSMRLRNVEPSLFS 457
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y +L+ I + F S+C D+ + ++R Y++ E+A+ + +
Sbjct: 458 YSAVLRCHVAKEDIAAAEDAFRAL-SKCGIPDVFCCNDLLRLYVKLGQLEKASALILKLR 516
Query: 381 K 381
K
Sbjct: 517 K 517
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 103/257 (40%), Gaps = 10/257 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
+ GR AL + E M + + S A L L KT + A F + S +
Sbjct: 327 RHGRGEQALGLYEEMRAHGIVPSNYTCASLLSLYYKTEDYSKALSLFAEMEQSRIVPDEV 386
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
YG L+ Y K + E A FE++D L + + ++ +++ G ++ +++ M
Sbjct: 387 IYGILVRIYGKVGLYEDAQCTFEEIDRADLLSDEQTYVAMAQVHMNAGNYDRALQVLDSM 446
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY---SNLASIYVK 262
+ RN+ +Y ++ + DI E F + KC ++L +YVK
Sbjct: 447 RLRNVEPSLFSYSAVLRCHVAKEDIAAAEDAFRAL-----SKCGIPDVFCCNDLLRLYVK 501
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYL 322
EKA + KL + D ++ + C + + +++ ++ S +
Sbjct: 502 LGQLEKASALILKLRKEVQLDEGLCMTVMEVCCKSGMIVDADKILKEMQKNRVAMKNSAM 561
Query: 323 VLLQALAKLNAIDILKQ 339
V L + N ++++
Sbjct: 562 VSLIEMYARNTTSVVQE 578
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
++S+ + G+ A+ + + M S + S F + + + + + A + F E
Sbjct: 754 IKSMLESGKLYSAVSIHDRMISSGIPQSLQTFNIMISVYGQGGKLDKATEMFTAAQELGL 813
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY +L+ Y K + A LF +M E + ++FN++ +Y G +K +
Sbjct: 814 RIDEKTYTNMLSFYGKAGRHQDASVLFTRMKEEGIMPGKISFNSMVNVYATSGLHDKAKF 873
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYS 225
+ +M+ ++LTY+ +++Y+
Sbjct: 874 IFEEMQSSGQIPESLTYLALIKAYT 898
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 97/245 (39%), Gaps = 3/245 (1%)
Query: 130 AEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
AE+ F + + Y A+++ CK T A LF +M + + V + L +
Sbjct: 663 AEELFKASASFPVGGPVYNAMVDALCKCGKTAEAYNLFMEMADRGHSRDAVTISILVSHL 722
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR 249
+ G+ ++ ++N + LD + Y +++S + + M + +
Sbjct: 723 TKHGKFQEAENIINGCFHGKVQLDTVVYNTFIKSMLESGKLYSAVSIHDRMISSGIPQ-S 781
Query: 250 WTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWG 308
T++ + S+Y + +KA +E+ R D K Y ++S Y + ++
Sbjct: 782 LQTFNIMISVYGQGGKLDKATEMFTAAQELGLRIDEKTYTNMLSFYGKAGRHQDASVLFT 841
Query: 309 ILK-STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
+K P S+ ++ A D K FEE +S + +I+AY +
Sbjct: 842 RMKEEGIMPGKISFNSMVNVYATSGLHDKAKFIFEEMQSSGQIPESLTYLALIKAYTEGR 901
Query: 368 MYEEA 372
Y +A
Sbjct: 902 SYSKA 906
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 127/318 (39%), Gaps = 27/318 (8%)
Query: 80 EYCVRSLRKFGRYRHALEVIEWMESRKMHFSY----TDFAVYLDLTAKTNGIAAAEKYFN 135
E CV ++ G R A E WM K+ Y + + L L + I AE+ F
Sbjct: 144 EMCVVLSQQRGP-RQAQEFFAWM---KLQLCYEPSVVAYTILLRLYGQVGKIKLAEETFL 199
Query: 136 GLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ E + G LL Y + + + + + AFN + + +
Sbjct: 200 EMLEVGVEPDAVACGTLLCTYARRGQHTDMMLFYAAVRRRGVVPPVSAFNFMVSSLQKDK 259
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT-- 251
KV L NQM++ N+ + TY + + SY + ++ V+ +M + R+
Sbjct: 260 LHGKVIYLWNQMRETNVVPNQFTYTIVIGSYVKESLLEEAMNVWRKM-----KRSRFVPE 314
Query: 252 --TYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHF----LISLYCNTSNLD-AVN 304
TYS L S+ + + E AL EEM+ ++ L+SLY T + A++
Sbjct: 315 EATYSGLISLSAR---HGRGEQALGLYEEMRAHGIVPSNYTCASLLSLYYKTEDYSKALS 371
Query: 305 RVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL 364
+ +S P Y +L++ K+ + + FEE + D + + + ++
Sbjct: 372 LFAEMEQSRIVPDEVIYGILVRIYGKVGLYEDAQCTFEEIDRADLLSDEQTYVAMAQVHM 431
Query: 365 QKDMYEEAALIFNNAKKR 382
Y+ A + ++ + R
Sbjct: 432 NAGNYDRALQVLDSMRLR 449
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S + TY L++ + E+AL L+E+M + + +L ++Y + K
Sbjct: 309 SRFVPEEATYSGLISLSARHGRGEQALGLYEEMRAHGIVPSNYTCASLLSLYYKTEDYSK 368
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
L +M+Q I D + Y + ++ Y + + + F E+ + + TY +A
Sbjct: 369 ALSLFAEMEQSRIVPDEVIYGILVRIYGKVGLYEDAQCTFEEI-DRADLLSDEQTYVAMA 427
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLIS--LYCNTSNLD 301
+++ A +++ AL+ L+ M+ R+ + F S L C+ + D
Sbjct: 428 QVHMNAGNYDR---ALQVLDSMRLRNVEPSLFSYSAVLRCHVAKED 470
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 76/399 (19%), Positives = 159/399 (39%), Gaps = 12/399 (3%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKN 143
L K GR R A + M + + S T + + L A ++ N + + + N
Sbjct: 318 LCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPN 377
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
+ + + Y K + ++A+ +F KM + + V++ L +LG+ + N
Sbjct: 378 HHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFN 437
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
QM ++ D + + + ++ + VE +F+EM N + L ++ +
Sbjct: 438 QMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 497
Query: 264 ELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSY 321
+ E L + +E M R D +Y+ LI +C +D +++ G++ P + SY
Sbjct: 498 RVMEGQRL-VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSY 556
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
LL K ID F + S + + + I+ Q + EA ++ N
Sbjct: 557 NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM-- 614
Query: 382 RANASARFFKSRESFMIYYL-RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFE 440
N+ ++ + ++ L +S +D A+ + S+ Q + + + +
Sbjct: 615 -INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673
Query: 441 EEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
+E D + F + + + Y L+++ I G L
Sbjct: 674 KE---DAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSL 709
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 95/233 (40%), Gaps = 3/233 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +++ CK + +RA A+F++M + N +N L YL +G+ ++V ++ +M
Sbjct: 240 TYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM 299
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY-VKAE 264
+ TY + +Y N R F++ K TTY + Y K
Sbjct: 300 SAGGPKPNCCTYGSLL-NYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGA 358
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLV 323
L E +L + + ++ S Y +D ++ ++ P SY
Sbjct: 359 LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGA 418
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
L+ AL KL +D + F + + + D+ + ++ D +E+ +F
Sbjct: 419 LIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELF 471
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 116/302 (38%), Gaps = 10/302 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
VR+L K R + A EV ME + +D AK A K + + A
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
TYG L+N CK ERA LF M F N+V + +L + + G+ ++
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
L ++M + D +T+ V + + + + F EM C K TY+ +
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGC--KPNVVTYTTIIQG 409
Query: 260 YVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPP 316
K A +K + P D Y L+ +C LD ++ L K + P
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFP-DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP 468
Query: 317 TNTSYLVLLQALAKLNAID-ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
Y L+ L +++ L FE+ ++ + D L II + +EA I
Sbjct: 469 NLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRI 528
Query: 376 FN 377
F
Sbjct: 529 FQ 530
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 13/265 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE------ 139
+R F R R A + + E K D +L L EK F E
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGF 220
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+R + A++ K + A +F +M++ F + +A+N + + G ++
Sbjct: 221 VPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEAL 280
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+++ M + +TY + + S ++ E +F M + Y++L
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS-GFRPNSVIYTSLIHG 339
Query: 260 YVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
+ K+ ++A ++ E R D + +I C + N + A +++ P
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399
Query: 318 NTSYLVLLQALAKL----NAIDILK 338
+Y ++Q L+K+ NA I+K
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMK 424
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 110/291 (37%), Gaps = 19/291 (6%)
Query: 45 KLYKRLSALGATGGSVTGALNAYIMEGK----TVRKDMLEYCVRSLRKFGRYRHALEVIE 100
+LY L GGSV L+ + K T+ + + L K GR A + +
Sbjct: 471 QLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQ 530
Query: 101 WMESRKMHFSYTDFAVYLD--LTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCK 156
M S T + + ++ ++ N + A + L + Y + TY L CK
Sbjct: 531 RMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCK 590
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
+RA+ + E+ + + VA+ L T GQ ++ L +M ++ + D
Sbjct: 591 IGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAA 650
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
Y + + ++ + F EM + + K TY+ L A ++ A +
Sbjct: 651 YCCIINGLIKVKKLEDACKFFDEMIGKGQ-KPTVATYTALVQALCHAGNVDE---AFHRF 706
Query: 277 EEMKPRDRKA-----YHFLISLYCNTSNLDAVNRVWG--ILKSTFPPTNTS 320
E M R Y LI +C +DA +++ I + P TS
Sbjct: 707 ESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 133/344 (38%), Gaps = 11/344 (3%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ + +TY L+N E + A+ E+M + NT +FN L + R + +
Sbjct: 115 FQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAV 174
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
MK++ D T+++ + + VF+EM ++ +
Sbjct: 175 TCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRT 234
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
+KA+ ++A ++E+ P D AY+ +I + +A+ + +L PT
Sbjct: 235 LLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPT 294
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y +L+ +L K ++ ++ F + + + +I + + +EA +F+
Sbjct: 295 EVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354
Query: 378 NAKKRANASARFFKSRESFMIYYL-RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
+ A R + MI L +S + A E E + +P VT T
Sbjct: 355 ---EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE----EMMRGGCKPNVVTYTTII 407
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKL 479
+ + V A K + + C D Y L+ + G+L
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 123/298 (41%), Gaps = 5/298 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-- 140
+ L K G A E+ + M+ + + + ++L K A K F+ + +
Sbjct: 232 INGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDC 291
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY AL+N + +E + E+A +FE+M E + A+N L Y R G P
Sbjct: 292 KPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAE 351
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ + M+ D +Y + + +Y D E VF +M ++ L S Y
Sbjct: 352 IFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDM-KRVGITPTMKSHMVLLSAY 410
Query: 261 VKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTN 318
K K E L ++ + + D + +++LY + V ++ K ++
Sbjct: 411 SKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADI 470
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++Y +L+ + I+ ++ F+ S+ D+ I AY +K +Y + IF
Sbjct: 471 STYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIF 528
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L+ YC + E+A A+F +M + V +N ++ G +K + +M
Sbjct: 192 TYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRM 251
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE-MCNECEDKCRWTTYSNLASIYVKAE 264
K+ TY + + Y ++F+E M ++C K TY+ L + + +
Sbjct: 252 KKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDC--KPNICTYTALVNAFAREG 309
Query: 265 LFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSY 321
L EKAE ++++E ++P D AY+ L+ Y ++ +++ P SY
Sbjct: 310 LCEKAEEVFEQMQEAGLEP-DVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASY 368
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
+L+ A K D + F++ + + M+ V++ AY
Sbjct: 369 NILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAY 410
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 115/260 (44%), Gaps = 15/260 (5%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTY 147
+FGR H L + +++ + +D+ AK IA A+ F+ + K +
Sbjct: 252 EFGRLLHLL-----VGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPE-PW 305
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+++ YCK + A +LF++M + + FN++ T Y+ G+ L Q+++
Sbjct: 306 NVIIDGYCKLGHVDIARSLFDQMGAR----DVITFNSMITGYIHSGRLRDALQLFMQLRR 361
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
+ DN T + + + + L + + + ++ + + L +Y+K +
Sbjct: 362 HGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLV-TALVDMYMKCGRVD 420
Query: 268 KAELALKKLEEMKPRDRKAYHFLIS-LYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQ 326
+A ++ E RD + +I+ L N +DA+ + + F PT+ +Y+ +L
Sbjct: 421 EATAVFHRMGE---RDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLT 477
Query: 327 ALAKLNAIDILKQCFEEWES 346
A + + ++ +Q F E S
Sbjct: 478 ACSHSSLLNEGRQHFNEMRS 497
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 122/299 (40%), Gaps = 8/299 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE-YA 141
+R L + R++ A+E ME + +D K N + A F +
Sbjct: 195 MRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSIL 254
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
N +T+ L++ +CK + AL +M E F + +++ ++ Y R KV +
Sbjct: 255 LNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSV 314
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT--YSNLASI 259
+N+M+++ + +TY + M + +I V+ +M C T YS+L I
Sbjct: 315 LNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGS---SCVPDTSFYSSLIYI 371
Query: 260 YVKAELFEKAELALKKLEEMKP-RDRKAYHFLISLYC-NTSNLDAVNRVWGILKSTFPPT 317
KA + A + + + D Y+ +IS C ++ DA+ + + +S+ P
Sbjct: 372 LSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPD 431
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y LL+ + N + +L S ++ +++ + E A L F
Sbjct: 432 LNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFF 490
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 118/270 (43%), Gaps = 11/270 (4%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YT+ L++ +CKE + A + M V +N+L Y + Q K + + N
Sbjct: 178 YTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNT 237
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M Q +S D +Y + + + + +D + EM ++ + TYS+L K+
Sbjct: 238 MAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHK-QIIPNVVTYSSLIDGLCKS- 295
Query: 265 LFEKAELALKKLEEM----KPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNT 319
K ALK ++EM +P + Y ++ C +D A+ + + P
Sbjct: 296 --GKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMY 353
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
+Y +L++ L + ++ ++ FE+ + + ++ V+I+ + K +++EA + +
Sbjct: 354 TYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLL--S 411
Query: 380 KKRANASARFFKSRESFMIYYLRSRQLDLA 409
K N K+ E ++ + + ++A
Sbjct: 412 KMEDNGCIPNAKTYEIIILSLFKKDENEMA 441
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 2/163 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
V K GR + A V+ M + + + +D + A+ FN +++
Sbjct: 184 VDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGV 243
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ + +Y L+N +CK M + A+ L ++M + + N V +++L + G+
Sbjct: 244 SPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALK 303
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
LV++M R + +TY + + + +D + +M N+
Sbjct: 304 LVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQ 346
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ N TY +L++ CK AL L ++M + N V ++++ + Q +
Sbjct: 277 QIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNA 336
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
L+ QMK + I + TY + ++ ++ +VF ++ + + + TY+ +
Sbjct: 337 IALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVY-TYTVMIQ 395
Query: 259 IYVKAELFEKAELALKKLEE 278
+ LF++A L K+E+
Sbjct: 396 GFCDKGLFDEALTLLSKMED 415
>gi|357444885|ref|XP_003592720.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481768|gb|AES62971.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 553
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 156/410 (38%), Gaps = 78/410 (19%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E K + RL L GS LN+ M+ +T+ K ++ + ++ ++ E++EW+
Sbjct: 71 EQKNWWRLMKLIDETGSAVSVLNSEKMKNQTIPKALVVGTLMRFKQLKKWNLVAEILEWL 130
Query: 103 ESRKM-HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELM 159
++ F DF + + K AEK +++ YA N + AL+ Y K
Sbjct: 131 RAQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYAPNVVSQTALMEAYGKGGR 190
Query: 160 TERALALFEKMDEL------------------------------KFLGNTVA-------- 181
A A+F +M K L + +
Sbjct: 191 YNNAEAIFRRMQTFGPEPSAFTYQIILKTFVQGNKFKEAEEVFDKLLNDEKSPLRPDQKM 250
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ---SYSHLNDI-DGVER-- 235
FN + MY + G EK R M +R I +TY M +Y +++I D ++R
Sbjct: 251 FNMMIYMYKKSGSHEKARQTFALMAERGIKKATVTYNSLMSFETNYKEVSNIYDQMQRAD 310
Query: 236 --------------------------VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
VF EM + R Y+ L + + + E+A
Sbjct: 311 LRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTR-KAYNILLDAFSISGMVEQA 369
Query: 270 ELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQ 326
+ K + K P D +Y ++S Y N +++ + + +++ F P +Y L++
Sbjct: 370 RIVFKSMRRDKYMP-DLCSYTTMLSAYVNAPDMEGAEKFFKRLIQDGFEPNVVTYGTLIK 428
Query: 327 ALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
AK N I+ + + +EE R + + I+ A+ + ++ A F
Sbjct: 429 GYAKANDIEKVMEKYEEMLGRGIKANQTILTTIMDAHGKNGDFDSAVNWF 478
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
R Y LL+ + M E+A +F+ M K++ + ++ + + Y+ E
Sbjct: 350 RKAYNILLDAFSISGMVEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFK 409
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
++ Q + +TY ++ Y+ NDI+ V + EM K T + + + K
Sbjct: 410 RLIQDGFEPNVVTYGTLIKGYAKANDIEKVMEKYEEMLGRG-IKANQTILTTIMDAHGKN 468
Query: 264 ELFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
F+ A E+AL L D+KA + L+SL ++ N +
Sbjct: 469 GDFDSAVNWFKEMALNGLLP----DQKAKNILLSLAKTEEDIKEANEL 512
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K + D + Y ++ + G+ + M SR + + +D+ K
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A N + + N TYGAL++ CK + A L ++M + N +N+
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ + G E+ L+ +M+ I D +TY + +Y L DID ++ EM +
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALK-KLEEMKPRDRKAYHFLISLYCNTSNLDAV 303
T++ L + + + E + L LE+ D Y+ L+ +C ++++
Sbjct: 569 LQPTV-VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTT 627
Query: 304 NRVWGILKST-FPPTNTSYLVLLQALAK 330
+++ +++ P + +Y +L++ K
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCK 655
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 4/227 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EY 140
+ SL + G+ + A ++ M+ R ++ +D + A K + +
Sbjct: 265 IYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGL 324
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
NRYTY +++ CK + A + +M K + + V + L + +LG
Sbjct: 325 KPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANK 384
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
++M + IS D +TY +Q + + + +F+EM + K TY+ L +Y
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL-KPDEVTYTTLIDVY 443
Query: 261 VKA-ELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
KA E+ L + ++ + Y LI C LD N +
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 11/238 (4%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N Y L++ CK A LF KMD L + N ++ L + + G +
Sbjct: 190 SPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQ 249
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ MK+ I + Y + Y + +D +VF EM E C TY+ L
Sbjct: 250 MYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEM-REKGIACGVMTYNILIGGL 308
Query: 261 VKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTN 318
+ + F +A + K+ ++ + Y+ LI+ +C+ +D R++ LKS+ PT
Sbjct: 309 CRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTL 368
Query: 319 TSYLVLLQALAKL----NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+Y L+ +K+ A+D++K E E RC + ++I A+ + + E+A
Sbjct: 369 VTYNTLIAGYSKVENLAGALDLVK----EMEERCIAPSKVTYTILIDAFARLNYTEKA 422
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L+ C+ A+ L K++++ N V +N L + +G+ + L NQ+
Sbjct: 300 TYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQL 359
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K +S +TY + YS + ++ G + EM C + TY+ L + +
Sbjct: 360 KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSK-VTYTILIDAFARLNY 418
Query: 266 FEKA-EL-ALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
EKA E+ +L + + P D Y LI C N+ ++++
Sbjct: 419 TEKACEMHSLMEKSGLVP-DVYTYSVLIHGLCVHGNMKEASKLF 461
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLN 152
AL++++ ME R + S + + +D A+ N A + + + S + YTY L++
Sbjct: 387 ALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIH 446
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
C + A LF+ + E+ N+V +N + Y + G + L+N+M +
Sbjct: 447 GLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGM 504
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 10/236 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKM-DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY L++ CKE + A+ LF +M + NTV +N+L + + R+G+ ++ L+ +
Sbjct: 126 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 185
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M + S D +TY M + L +D Y++ N+ K S+
Sbjct: 186 MAETGSSPDVVTYTTLMNGFCKLARLDDA----YDLLNQMTRKGLTPNVVTFTSLMDGLC 241
Query: 265 LFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS 320
+ A+ L EM+ + Y+ ++ YC + L+ R + + + PP S
Sbjct: 242 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA-RKFMLEEMDCPPNVVS 300
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ ++++ L K+N + EE R + D+ + +I ++ +EA ++
Sbjct: 301 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVY 356
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 120/296 (40%), Gaps = 13/296 (4%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR 144
L + GR V++ M SRKM +++ D ++T ++ + E K
Sbjct: 267 GLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRT---GDSQTMLSLFEESVKKG 323
Query: 145 YTYGA-----LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
GA LLN CK+ +A + + + L TV +N L Y ++G E
Sbjct: 324 VKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAF 383
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+ QMK R I D++TY + + I + EM + T++ L
Sbjct: 384 SIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNP-SVETFNTLIDA 442
Query: 260 YVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYC-NTSNLDAVNRVWGILKSTFPP 316
Y +A EK + L ++E +KP + +Y +++ +C N L+AV + + P
Sbjct: 443 YGRAGQLEKCFIILSDMQEKGLKP-NVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLP 501
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
Y ++ A + + D E+ +S + +++I+ ++ EA
Sbjct: 502 GAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEA 557
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G + GA + + M+ + +R D + Y + L K R A +++ ME ++ S F
Sbjct: 377 GDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETF 436
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAK-----NRYTYGALLNCYCKELMTERALALFEK 169
+D + + EK F LS+ + N +YG+++N +CK A+A+ +
Sbjct: 437 NTLIDAYGRAGQL---EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDD 493
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M L +N + Y+ G ++ L +MK + +TY + ++ +
Sbjct: 494 MFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQ 553
Query: 230 IDGVERVFYEMCN 242
I E + + N
Sbjct: 554 ISEAEELLDSLRN 566
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 125/316 (39%), Gaps = 12/316 (3%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME K V D+ Y + K G + AL V + ME ++ + + K
Sbjct: 226 MEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGK 285
Query: 127 IAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
+ A + F + + N TY L++ YCK E AL L E M V +N++
Sbjct: 286 MREAMRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSIL 345
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
G+ L+++M +R + D++T + +Y + D++ + +M E
Sbjct: 346 RKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKML-EAGL 404
Query: 247 KCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNR 305
TY L + K E A EL L+ + + Y +++ YC N DAV
Sbjct: 405 TPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLA 464
Query: 306 VWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL 364
+ L F + Y L++ L K+ I+ ++ E + S D + + +Y
Sbjct: 465 LPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYW 524
Query: 365 Q-------KDMYEEAA 373
+ DM EE A
Sbjct: 525 KSGNTNAASDMLEEMA 540
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 104/262 (39%), Gaps = 40/262 (15%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N Y Y L++ K ERA + +M+ + + +N L +Y + G + +
Sbjct: 199 NIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQ 258
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++M++ I+LD ++Y + + + R+F E+ + + TY+ L Y K
Sbjct: 259 DKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDAIPNH---VTYTTLIDGYCK 315
Query: 263 AELFEKA----ELALKK----------------------------LEEMKPR----DRKA 286
A FE+A E+ + K L EM R D
Sbjct: 316 ANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVT 375
Query: 287 YHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
+ LI+ YC +L+ A+ +L++ P + +Y L+ K + ++ K+
Sbjct: 376 CNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGML 435
Query: 346 SRCSSYDMRLADVIIRAYLQKD 367
S + R I+ +Y +KD
Sbjct: 436 DAGFSPNYRTYSWIVDSYCKKD 457
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 9/194 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N + ++ Y K MT A+ +FE+M + A L L+ G V +
Sbjct: 129 NSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVY 188
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT---TYSNLASI 259
+M Q + + Y + + S D++ E + NE E K TY+ L ++
Sbjct: 189 KRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFIL----NEMEVKGVVPDIFTYNTLIAL 244
Query: 260 YVKAELFEKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
Y K L +A K+E E D +Y+ LI +C + R++G +K P +
Sbjct: 245 YCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDAI-PNH 303
Query: 319 TSYLVLLQALAKLN 332
+Y L+ K N
Sbjct: 304 VTYTTLIDGYCKAN 317
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N Y + L+N +CKE A +F+++ + V+FN L Y ++G ++
Sbjct: 236 FPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGF 295
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLA 257
L +QM++ D TY + + N +DG +F EMC + +TT +
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAV-NRVWGILKSTFPP 316
S + +L + E K L + D Y+ L++ +C +L A N V G+++ P
Sbjct: 356 SRNGEIDLMK--ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 317 TNTSYLVLLQALAK 330
+Y L+ +
Sbjct: 414 DKITYTTLIDGFCR 427
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 6/265 (2%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+DM + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ L+ + + A FE M + + V +N + R+
Sbjct: 140 KMLSEGIEPTRHTFNVLIWGFFLSGKVDTANRFFEDMKSREISPDVVTYNTMINGCYRVK 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ ++ +MK RNI ++Y ++ Y ++ +D R+ EM K TY
Sbjct: 200 KMDEAEKYFVEMKGRNIEPTVVSYTTLIKGYVSVDQVDDALRLVEEM-KGYGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L A +A+ LK++ + + P+D + LIS C NL A V ++
Sbjct: 259 STLLPGLCDAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLGAAADVLKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLNAID 335
+ + P Y VL++ K D
Sbjct: 319 RLSVPTEAGHYGVLIENFCKAGQHD 343
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K + D + Y ++ + G+ + M SR + + +D+ K
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A N + + N TYGAL++ CK + A L ++M + N +N+
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ + G E+ L+ +M+ I D +TY + +Y L DID ++ EM +
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALK-KLEEMKPRDRKAYHFLISLYCNTSNLDAV 303
T++ L + + + E + L LE+ D Y+ L+ +C ++++
Sbjct: 569 LQPTV-VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTT 627
Query: 304 NRVWGILKST-FPPTNTSYLVLLQALAK 330
+++ +++ P + +Y +L++ K
Sbjct: 628 TKIYKRMRNQGVAPDSNTYNILIKGHCK 655
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 4/227 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EY 140
+ SL + G+ + A ++ M+ R ++ +D + A K + +
Sbjct: 265 IYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGL 324
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
NRYTY +++ CK + A + +M K + + V + L + +LG
Sbjct: 325 KPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANK 384
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
++M + IS D +TY +Q + + + +F+EM + K TY+ L +Y
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL-KPDEVTYTTLIDVY 443
Query: 261 VKA-ELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRV 306
KA E+ L + ++ + Y LI C LD N +
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 27/251 (10%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ K +R D++ Y + K G A+ V E M+ + ++ K
Sbjct: 277 MKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFER 336
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I A +Y +G+ + N TY L++ +CK M A F M + N + +
Sbjct: 337 IPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS 396
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L ++G + L ++M+Q ++L+ +TY + + E +F +
Sbjct: 397 LIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALL--- 453
Query: 245 EDKCRWT----TYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL 300
K WT Y++L Y+KA++ EK A+ LEEM ++ K L
Sbjct: 454 --KAGWTLNQQIYTSLFHGYIKAKMMEK---AMDILEEMNKKNLKPDLLLYG-------- 500
Query: 301 DAVNRVWGILK 311
++WG+ +
Sbjct: 501 ---TKIWGLCR 508
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 11/179 (6%)
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
AL+ F+ M + +N + R G E R L +MK + + D +TY +
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 223 SYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP 281
Y + + G VF EM + CE TY++L + + K FE+ A + L MK
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDV--ITYNSLINCFCK---FERIPQAFEYLHGMKQ 349
Query: 282 RDRKA----YHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAID 335
R + Y LI +C L N+ + +++ P +Y L+ A K+ ++
Sbjct: 350 RGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLN 408
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 125/340 (36%), Gaps = 49/340 (14%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G +TGA++ + M+ D++ Y + KF R A E + M+ R + + +
Sbjct: 300 GMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTY 359
Query: 115 AVYLDLTAKTNGIAAAEKYF-------------------------NGLSEYAK------- 142
+ +D K + A K+F L+E K
Sbjct: 360 STLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQ 419
Query: 143 -----NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N TY ALL+ C++ A LF + + + N + +L Y++ EK
Sbjct: 420 AGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEK 479
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
++ +M ++N+ D L Y + N+I+ V EM +C Y+ L
Sbjct: 480 AMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM-DCGLTANSYIYTTLI 538
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVWG-ILKS 312
Y K K A+ L+EM+ K Y LI C + R + + ++
Sbjct: 539 DAYFKV---GKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRN 595
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
P Y L+ L K + ++ K F E + S D
Sbjct: 596 GLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G+ A+ +++ M+ + + + V +D K + A +YF+ ++ N
Sbjct: 543 KVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIM 602
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y AL++ CK E A LF +M + + + + +L ++ G P + L N+M
Sbjct: 603 IYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRM 662
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+ + LD Y + +S + + + EM
Sbjct: 663 VEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEM 697
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 9/245 (3%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLG--NTVAFNNLSTMYLRLGQPEKVRPLV 202
++Y LL C + +++AL L M + K + VA+ + LR GQ +K L
Sbjct: 172 FSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLF 231
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASIYV 261
+ M R S D +TY + + S +D +VF M N C Y++L Y
Sbjct: 232 DAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC--IMYTSLVHGYC 289
Query: 262 KAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTN 318
+ ++A KK+ ++P D Y L+ C +++ ++K P +
Sbjct: 290 SSGKPKEAIGIFKKMCRHGVEP-DVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDS 348
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
T+Y LL A A+ + + + + ++I+ AY + + +EA L+F+N
Sbjct: 349 TTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSN 408
Query: 379 AKKRA 383
+++
Sbjct: 409 MRQQG 413
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K + ++ Y V K G+ A V+ M + + + F + K +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I A + F + + YT+ +L++ C+ + AL L M + NTV +N
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM---- 240
L +LR G+ ++ R LVN+M + LD +TY ++ ++D +F +M
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 241 -------CNECEDK-CR----------------------WTTYSNLASIYVKAELFEKAE 270
CN + CR T+++L + +A E
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 271 LALKKLE-EMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQAL 328
+KL+ E P D ++ L+S C + DA + ++ F P + ++ +LLQ++
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Query: 329 AKLNAID 335
+D
Sbjct: 715 IPQETLD 721
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 114/298 (38%), Gaps = 12/298 (4%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGA 149
++ A V M SRK+ + F V + N I +A ++++ N Y
Sbjct: 198 HKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQT 257
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
L++ K AL L E+M + + + FN++ + + + +VN+M R
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ D++TY M + +D + +FY + K ++ L +V + A
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRI-----PKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 270 ELALKKLEE---MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLL 325
+ L + + P D Y+ LI Y + A+ + + P SY +L+
Sbjct: 373 KAVLSDMVTSYGIVP-DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
KL ID E + + + +I A+ ++ EA IF ++
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 174/445 (39%), Gaps = 69/445 (15%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+R+L G+ AL+V + M + S L+ A+T + A F +
Sbjct: 180 LRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGA 239
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+++T + YCK AL E+M ++ N VA++ + Y +GQ R
Sbjct: 240 LPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARR 299
Query: 201 LVNQMKQRNISLDNLTYIVWMQSY---SHLNDIDGV-------------ERVFYEMCN-- 242
+++ + R S + +TY + ++ Y ++ + +GV E VF + N
Sbjct: 300 MLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGY 359
Query: 243 ----ECEDKCRWT-------------TYSNLASIYVKAELFEKAELALKKLEEMKPR-DR 284
ED R Y+ + + Y K +A L ++ + R D
Sbjct: 360 CQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDT 419
Query: 285 KAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAID-------- 335
+Y+ L+ YC ++ + +L++ F T +Y LL+ L +ID
Sbjct: 420 YSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFL 479
Query: 336 ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRES 395
+LK+ E CS+ ++ + + E+A ++ R A K+ +
Sbjct: 480 MLKKGIAPNEISCST--------LLDGFFKSGKTEKALNLWKETLARGLA-----KNTTT 526
Query: 396 FMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVL 455
F +++ + E E + + KQ+ P +T T F + + D+D A ++L
Sbjct: 527 FNTVINGLCKIE-RMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRAS---RIL 582
Query: 456 KSLNCLDFSAY-----SLLIKTYIA 475
L L F+ SL+ +IA
Sbjct: 583 NELENLGFAPTIEFFNSLITGHFIA 607
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 3/191 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRY 145
K G+ AL + + +R + + T F ++ K + AE+ + + ++ +
Sbjct: 501 KSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDII 560
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L + YCK +RA + +++ L F FN+L T + Q KV ++ +M
Sbjct: 561 TYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEM 620
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
R +S + + Y + + D+ ++ EM + + S ++ Y K +
Sbjct: 621 SNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGK- 679
Query: 266 FEKAELALKKL 276
F++A L L+ L
Sbjct: 680 FDEANLVLQNL 690
>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 804
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 146/360 (40%), Gaps = 24/360 (6%)
Query: 50 LSALGATGGSVTGALNA-YIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWM-ESR 105
LS L TG V AL+ Y +E + D++ Y + L K G++ A+ V + M R
Sbjct: 389 LSGLCKTG-RVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKR 447
Query: 106 KMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERA 163
+ S T A+ L L K + A + L S + Y +++ Y K E A
Sbjct: 448 ILPNSRTLGAIMLGLCQK-GMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEA 506
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
L LF+ E N FN+L Y + + R +++ +K + ++Y M +
Sbjct: 507 LELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDA 566
Query: 224 YSHLNDIDGVERVFYEMCNEC------------EDKCRWTTYSNLASIYVKAELFEKAEL 271
Y++ I +E + EM E + CR N + ++ + EK
Sbjct: 567 YANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQV-LRERILEKFNH 625
Query: 272 ALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALA 329
L+ +E E D+ Y+ +I C +L ++ +KS PT+ +Y +L+ +L
Sbjct: 626 VLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLC 685
Query: 330 KLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA-NASAR 388
I + + R S +I+A+ K E A ++FN R N S R
Sbjct: 686 IYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIR 745
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 6/239 (2%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
Y++ L+N C AL L M++ ++V +N L + LG ++
Sbjct: 277 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQD 336
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M + +S D +TY + + L +ID + +M + + YS + S K
Sbjct: 337 MLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTG 396
Query: 265 LFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL--KSTFPPTNTS 320
++A LE + P D AY +I C D RV+ + K P + T
Sbjct: 397 RVDEALSLFYDLEAYGLTP-DLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTL 455
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
++L L + + + + S + D+ L +++I Y + EEA +F A
Sbjct: 456 GAIML-GLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVA 513
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 135/321 (42%), Gaps = 11/321 (3%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME D++ + V +L K G A +++ M + + + + + + N
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNR 419
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A FN + YTY ++ Y K +++AL FEKM N VA N
Sbjct: 420 LDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNA 479
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NE 243
+G+ + + + N++K ++ D++TY + M+ YS +D + +M N+
Sbjct: 480 SLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ 539
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD- 301
CE ++L + KA ++A +L++MK Y+ LI+ +
Sbjct: 540 CEPD--IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQR 597
Query: 302 AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDI-LKQCFEEWESRCSSYDMRLADVII 360
A+ + + PP ++ +L L K + +D+ LK ++ C D+ + II
Sbjct: 598 AMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMP-DVLTFNTII 656
Query: 361 RAYLQKDMYEEAALIFNNAKK 381
+ + +A +F+ KK
Sbjct: 657 HGLVIEKRVSDAIWLFHQMKK 677
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 152/379 (40%), Gaps = 16/379 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L + G R ALE+ M + S F+ + T K + +
Sbjct: 201 IHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGL 260
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N YTY + + + A + ++M++ + V + L G+ +
Sbjct: 261 KPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAME 320
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR-WTTYSNLASI 259
L +MK + D +TYI + +S D+ V+ + EM E + T++ L +
Sbjct: 321 LFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM--EADGYAPDVITFTILVNA 378
Query: 260 YVKAELFEKA--ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPP 316
KA ++A L + + + + P + Y+ LIS + LD ++ +++ P
Sbjct: 379 LCKAGNIDEAFHLLDVMRKQGVLP-NLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVP 437
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
T +Y++ + K D + FE+ + R + ++ + + + + EA +IF
Sbjct: 438 TAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIF 497
Query: 377 NNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF 436
N K +N A + M Y ++ Q+D A+ LS+ + P + +++
Sbjct: 498 NRLK--SNGLAPDSVTYNMMMKCYSKAGQVDEAIE----LLSDMSENQCEPDIIVINSLI 551
Query: 437 RFFEEEKDVDGA-EEFCKV 454
+ VD A + FC++
Sbjct: 552 NTLYKAGRVDEAWKMFCRL 570
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--K 142
L K GR A E+ E M + + + ++ KT + A + F +
Sbjct: 904 GLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRP 963
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ +Y +L+ C C+ + AL FEK+ + +++A+N + R + E+ L
Sbjct: 964 DLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLY 1023
Query: 203 NQMKQRNISLDNLTY 217
++M+ R I+ D TY
Sbjct: 1024 DEMQSRGINPDLFTY 1038
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 112/263 (42%), Gaps = 12/263 (4%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK-----NRY 145
RY ++E M+ + F + + + N EK L+ + K Y
Sbjct: 10 RYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEAN---MMEKALQTLAAFTKEGGRPTAY 66
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +++ + K + L ++++M + KF+ + FN L + Q E+ + M
Sbjct: 67 TYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDM 126
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ N+S D TY + ++S + ID V ++F M + +T +S + + +
Sbjct: 127 FKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRV 186
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN-TSYLVL 324
E ++ + +++ D Y+ LI + T L+ R + + + TN +Y L
Sbjct: 187 DEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLE---RAFDFVGKSRSFTNEVTYNSL 243
Query: 325 LQALAKLNAIDILKQCFEEWESR 347
L +L + I L + F + +++
Sbjct: 244 LSSLGRKGDIQGLMELFGQMKAK 266
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 130/316 (41%), Gaps = 16/316 (5%)
Query: 74 VRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
V D+ Y + RSL GR +++ E M ++ + + + + A
Sbjct: 131 VSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEAC 190
Query: 132 KYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
F + + + TY L++ + K ERA F+ + + + N V +N+L +
Sbjct: 191 DIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSL 247
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR 249
R G + + L QMK + + + LTY + ++ ++ V +++ EM + + K
Sbjct: 248 GRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDN-DIKYD 306
Query: 250 WTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNR 305
T +N+ KA + E A + ++MK + D Y+ LI+ LDA
Sbjct: 307 IVTINNVLDCLSKA---GRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGA 363
Query: 306 -VWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL 364
+ + ++ P +Y L+ + K + + + F E + R + ++ +I +
Sbjct: 364 LLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFG 423
Query: 365 QKDMYEEAALIFNNAK 380
+ + A +F K
Sbjct: 424 KAGRTDAAISLFREMK 439
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T +L+C K E A LF+ M +TV +N L R G+ + L+ +M
Sbjct: 309 TINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEM 368
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ + + +TY + SY +++ R+F EM E +YS+L + KA
Sbjct: 369 EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEM-KERGVAPNVVSYSSLIEGFGKA-- 425
Query: 266 FEKAELALKKLEEMK----PRDRKAYHFLI 291
+ + A+ EMK P + Y+ LI
Sbjct: 426 -GRTDAAISLFREMKAEGCPPNHVTYNLLI 454
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 81/192 (42%), Gaps = 7/192 (3%)
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT--TY 253
+ V+ LV M++ LD + + Y N + E+ + ++ R T TY
Sbjct: 12 DDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMM---EKALQTLAAFTKEGGRPTAYTY 68
Query: 254 SNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILK 311
S++ +++K + L K++ + K D ++ LI ++ V+G + K
Sbjct: 69 SSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFK 128
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
P +Y +L+++L + ID + + FE ++ ++ ++ A+ +E
Sbjct: 129 LNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDE 188
Query: 372 AALIFNNAKKRA 383
A IF ++
Sbjct: 189 ACDIFQQMVQKG 200
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 127/313 (40%), Gaps = 21/313 (6%)
Query: 26 ETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIM----EGKTVRKD--ML 79
E V QR+ P PT + Y+ + + G + + + TV+ D M
Sbjct: 209 EAVFQRLLTTGPSPTA---QTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMY 265
Query: 80 EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-- 137
+ + K G+ A+ V + M+ ++ + F L A AE F L
Sbjct: 266 NLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFN---SLLACQKTWKDAEDVFRKLQA 322
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
++ + ++Y AL+N Y K E A A F+ M VA+N L Y + PE
Sbjct: 323 AKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEG 382
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
R ++ QMKQ + +Y + +Y +N + E+ M E + + T+ L
Sbjct: 383 ARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRM-KEADLQPNLQTFCVLM 441
Query: 258 SIYVKAELFEKAELALK--KLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW--GILKST 313
+ Y + + + KL ++P +R Y L++ Y + + D+ +W +L +
Sbjct: 442 TGYANGNKLDNMMRSFETMKLAGLEP-NRHVYTVLVNAYGSNDDFDSA-IIWYKQMLGTG 499
Query: 314 FPPTNTSYLVLLQ 326
+ P VLL+
Sbjct: 500 YKPDPILRTVLLK 512
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 9/209 (4%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y N+ Y +L YCK+ ++ +F++M EL + N + Y R +K
Sbjct: 150 YNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGRRRSFDKAE 209
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT--YSNLA 257
+ ++ S TY M+SYS +D V+R+F + + + Y+ +
Sbjct: 210 AVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMI 269
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLI---SLYCNTSNLDAVNRVWGILKSTF 314
Y K K E A+ + MK R+R A + L C + DA + + +
Sbjct: 270 HTYGKQ---GKVEQAMSVYQSMK-RERVALTIVTFNSLLACQKTWKDAEDVFRKLQAAKL 325
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEE 343
P SY L+ A AK + F++
Sbjct: 326 DPDVFSYTALVNAYAKARRAECAHAAFDD 354
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 110/283 (38%), Gaps = 18/283 (6%)
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M+Q + + Y + + +Y +D E +F M E Y+ Y +
Sbjct: 145 MEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMA-ELGVVANIEMYTLQIEGYGRRR 203
Query: 265 LFEKAELALKKLEEMKPRDR-KAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS--- 320
F+KAE ++L P + Y ++ Y LD V R++ ++ + PT
Sbjct: 204 SFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDAR 263
Query: 321 -YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ-KDMYEEAALIFNN 378
Y +++ K ++ ++ + + L V + L + +++A +F
Sbjct: 264 MYNLMIHTYGKQGKVEQAMSVYQSMKRE----RVALTIVTFNSLLACQKTWKDAEDVFRK 319
Query: 379 AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRF 438
+ A F S + + Y ++R+ + A AA + RP QV +
Sbjct: 320 LQA-AKLDPDVF-SYTALVNAYAKARRAECA----HAAFDDMIAAGIRPTQVAYNALINA 373
Query: 439 FEEEKDVDGAEEFCKVLKSLNCLD-FSAYSLLIKTYIAAGKLA 480
+ + KD +GA K +K C +Y+ LI Y++ +A
Sbjct: 374 YAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMA 416
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 10/236 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKM-DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY L++ CKE + A+ LF +M + NTV +N+L + + R+G+ ++ L+ +
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M + S D +TY M + L +D Y++ N+ K S+
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDA----YDLLNQMTRKGLTPDVVTFTSLMDGLC 302
Query: 265 LFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS 320
+ A+ L EM+ + Y+ ++ YC + L+ R + + + PP S
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA-RKFMLEEMDCPPNVVS 361
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ ++++ L K+N + EE R + D+ + +I ++ +EA ++
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVY 417
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 164/432 (37%), Gaps = 33/432 (7%)
Query: 66 AYIMEGKTVRK----DMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
A I GK V K D+ Y + +L R A + +E M +R + + + V +D
Sbjct: 30 ALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLID 89
Query: 120 LTAKTNGIAAAEKYFNGL-SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG- 177
K + A + + + TY +L++ CK ERA ++ ++E+ + G
Sbjct: 90 GLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCK---AERASEAYDLLEEMVYSGC 146
Query: 178 --NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ + L T + + + + + Q+ R D +TY + +
Sbjct: 147 IPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAID 206
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLY 294
+F M TY++L S + + ++A L+++ E D Y L++ +
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 295 CNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
C + L DA + + + + P ++ L+ L + N + E + S +
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 354 RLADVIIRAYLQKDMYEEA-ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNE 412
+ I+ Y + + EEA + N SF I +++ +
Sbjct: 327 YTYNTILDGYCRANQLEEARKFMLEEMDCPPNVV--------SFNIMIRGLCKVNRSSEA 378
Query: 413 MEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKV----LKSLNCLDFS-AYS 467
ME + EA++ P V T EK VD E C+V L+ CL S YS
Sbjct: 379 ME-LVEEARRRRCNPDVVMYTTVIDGLCREKKVD---EACRVYRKMLEEPGCLPNSITYS 434
Query: 468 LLIKTYIAAGKL 479
LI AG L
Sbjct: 435 TLITGLCNAGML 446
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 12/191 (6%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+ CK E+AL KM F + + + + + R + +M
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
RN++ + +TY V + +D + +M +C TY++L S KA
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT--AVTYNSLISGLCKA-- 128
Query: 266 FEKAELALKKLEEMK-----PRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNT 319
E+A A LEEM P D Y LI+ +C + D RV+ ++ F P
Sbjct: 129 -ERASEAYDLLEEMVYSGCIP-DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 320 SYLVLLQALAK 330
+Y L+ L K
Sbjct: 187 TYSCLIDGLCK 197
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 9/245 (3%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLG--NTVAFNNLSTMYLRLGQPEKVRPLV 202
++Y LL C + +++AL L M + K + VA+ + LR GQ +K L
Sbjct: 171 FSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLF 230
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASIYV 261
+ M R S D +TY + + S +D +VF M N C Y++L Y
Sbjct: 231 DAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC--IMYTSLVHGYC 288
Query: 262 KAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTN 318
+ ++A KK+ ++P D Y L+ C +++ ++K P +
Sbjct: 289 SSGKPKEAIGIFKKMCRHGVEP-DVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDS 347
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
T+Y LL A A+ + + + + ++I+ AY + + +EA L+F+N
Sbjct: 348 TTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSN 407
Query: 379 AKKRA 383
+++
Sbjct: 408 MRQQG 412
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 156/418 (37%), Gaps = 48/418 (11%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G V +++ Y +R + GR++ +V E M + F ++D K
Sbjct: 176 MCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGR 235
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I A K + + + N TY L+NC CKE ALAL +MD+ + V +N
Sbjct: 236 IGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNT 295
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRN--ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
L + + + L+ +M Q + + D +T+ + + + V EM
Sbjct: 296 LIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISV-REMMA 354
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDA 302
E C TY+ L +++ K +A+ + E+
Sbjct: 355 ERGCMCNLVTYNYLIGGFLR---VHKVNMAMNLMSEL----------------------- 388
Query: 303 VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
+ S P + +Y +L+ +KL +D + R ++ ++ A
Sbjct: 389 -------ISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAA 441
Query: 363 YLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQ 422
Q M E+A ++FN A + + M +S + A ++ L E
Sbjct: 442 LCQLGMMEQAMVLFNEMDMNCGLDAVAYS---TMMYGACKSGDIKAAKQLLQDMLDEG-- 496
Query: 423 FHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKL 479
P VT F + D++ AE K + + + D + + LIK Y A G++
Sbjct: 497 --LAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQI 552
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTA---------KTNGIAAAEKYFNGLSE--YAKN 143
AL + ME + F+ D LD A K+ I AA++ + + A +
Sbjct: 441 ALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPD 500
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY L+N + K E A + ++M F+ + F++L Y GQ K+ L++
Sbjct: 501 AVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIH 560
Query: 204 QMKQRNISLD 213
+M+ +N+++D
Sbjct: 561 EMRAKNVAID 570
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 110/254 (43%), Gaps = 8/254 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL---SE 139
++ L K GR+ AL + + K F + +D K+ + A + F + S+
Sbjct: 72 IKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ 131
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
N TY ++N CK+ +RA+ L + M+E N + ++ L + G+ +K
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDID-GVERVFYEMCNECEDKCRWTTYSNLAS 258
L+ +M +R D + Y + +D +E V + + C TY++L
Sbjct: 192 TLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPT--VVTYNSLME 249
Query: 259 IYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPP 316
++ +++ ++A ++ + E P D Y+ +I+ C + LD + ++ + P
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309
Query: 317 TNTSYLVLLQALAK 330
+Y ++ L K
Sbjct: 310 DVITYSTIIDGLCK 323
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 107/270 (39%), Gaps = 11/270 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEY 140
V L K GR +++ M R + L+ K+ + A + + S
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
TY +L+ +C+ +RA L + M E + + +N + R + + +
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV-----FYEMCNECEDKCRWTTYSN 255
L+ QM D +TY + +D ++ EM + TY+
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357
Query: 256 LASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KS 312
+ +A ++A L+++ E+ P D ++ +I C + +LDA +++G++ +
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVP-DLSSFSMVIGSLCKSHDLDAAYKIFGMMSER 416
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
P +Y L+ L+K +D + FE
Sbjct: 417 ECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
>gi|302768505|ref|XP_002967672.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
gi|300164410|gb|EFJ31019.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
Length = 717
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 141 AKNRYTYGALLNCYCKELMTE--RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
A N TY LL C +T+ RAL + E M E + V++N L YL G E+
Sbjct: 425 AANVVTYNTLLQGVCVFPITDMKRALEIVEDMKEAGVELDVVSYNTLINGYLEAGDNEQA 484
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
+ +M++ + +TY M++++ + V +VF +M + + ++ L
Sbjct: 485 LAVFTRMREAKVPASKVTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWNTLID 544
Query: 259 IYVKAELFEKAELALKKLEEMKPRD----RKAYHFLISLYCNTSNLDAVNRVW 307
Y +A L + A A LE+MK R Y+ L+ Y + N + +W
Sbjct: 545 AYARAGLEQDATRA---LEDMKSRGFSPTNATYNTLVKTYGRSRNFGQLILLW 594
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 133/332 (40%), Gaps = 22/332 (6%)
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM-KQRNISLDNLTY 217
M +AL++F + K + +N++ M ++ GQ EKV + +M + + D +TY
Sbjct: 177 MVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 218 IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE 277
+ SY L D R+F EM + C Y+ L IY K K E AL E
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTE-KIYTTLLGIYFKV---GKVEKALDLFE 292
Query: 278 EMKPRD-RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLV----LLQALAKLN 332
EMK + L V+ +G K T +V L+ L K+
Sbjct: 293 EMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVG 352
Query: 333 AIDILKQCFEE---WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF 389
++ L F E W RC+ + VI + K E + F+ K + + + F
Sbjct: 353 RVEELTNVFSEMGMW--RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 390 FKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAE 449
S + Y ++ +++ AL L E + + P + + K + A+
Sbjct: 411 TYS--ILIDGYCKTNRVEKAL----LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAD 464
Query: 450 EFCKVLK-SLNCLDFSAYSLLIKTYIAAGKLA 480
E K LK + + Y+++IK + GKL+
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ + +TY L++ YCK E+AL L E+MDE F A+ +L + + E
Sbjct: 406 SPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADE 465
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L ++K+ ++ + Y V ++ + + +F EM N+ + Y+ L S
Sbjct: 466 LFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY-AYNALMSGM 524
Query: 261 VKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTS-NLDAVNRVWGILKSTFPPTN 318
VKA + +A L+K+EE R D +++ +++ + T A+ I S P
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
+Y LL A + + E + + YD
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 39/278 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ Y K + A+ LF++M + + L +Y ++G+ EK L +M
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 206 KQRNISLDNLTYIVWM----------QSYSHLNDI--DGV--ERVFY------------- 238
K+ S TY + ++Y D+ DG+ + VF
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 354
Query: 239 -EMCNECEDKCRWTTYSNLAS--IYVKAELFEKAELA-------LKKLEEMKPRDRKAYH 288
E+ N + W + S +KA KA ++ K + + P + Y
Sbjct: 355 EELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF-TYS 413
Query: 289 FLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI YC T+ ++ A+ + + + FPP +Y L+ AL K + + F+E +
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKEN 473
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA 385
+ R+ V+I+ + + EA +FN K + +
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 151/347 (43%), Gaps = 42/347 (12%)
Query: 134 FNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
F+ +SE +N +T+ NC L+ R LA K+ + + N+V++ L T Y R G
Sbjct: 57 FDEMSE--RNVFTW----NCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCG 110
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ + R L N++ RN+ +++ + Y+ + +F M D W T
Sbjct: 111 RVAEARELFNRIPDRNV----VSWNAMVSGYARNGMVKRARELFDMM--PWRDDVSWLT- 163
Query: 254 SNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
+ S Y+K + +A + + M + L+S Y + A ++G +++
Sbjct: 164 --MISGYIKRKHVREAR---ELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTR 218
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P S+ V++ A+ ++ I ++ F+E + D+ I+R YLQ + A
Sbjct: 219 NP---VSWNVMITGYARAGSMGIAQRLFDEMPEK----DVLSRTAIMRGYLQNGSVDAAW 271
Query: 374 LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVD 433
+F + R + + M ++R+ +LD AL ++ + + + Q W +
Sbjct: 272 KVFKDMPHRDTVAW------NTMMDGFVRNDRLDDAL-KLFSEMPDRDQISW-------N 317
Query: 434 TFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLA 480
+ + ++ D+D A + + + + + +++ LI Y G L+
Sbjct: 318 AILQGYVQQGDMDSANAWFRRAPNKDAI---SWNTLISGYKDEGALS 361
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 122/293 (41%), Gaps = 11/293 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G+ ALE+ + ME + + + +D K + A F G+ + N T+
Sbjct: 418 GKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTF 477
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+L++ K + A +L+EKM + + + + +L + + G+ E + +M
Sbjct: 478 SSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 537
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF- 266
S D +M + + +F E+ N +YS L VKA L
Sbjct: 538 TGCSPDLTLINTYMDCVFKAGETEKGRALFREI-NAHGFIPDARSYSILIHGLVKAGLAN 596
Query: 267 EKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS----TFPPTNTSYL 322
E EL E+ D AY+ +I +C + VN+ + +L+ PPT +Y
Sbjct: 597 ETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGK---VNKAYQLLEEMKVKGHPPTVVTYG 653
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
++ LAK++ +D FEE +S ++ + +I + + +EA LI
Sbjct: 654 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLI 706
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 25/193 (12%)
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
L LF +M EL + N F L ++ R G+ + L+++MK ++ D + Y V +
Sbjct: 215 LILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDC 274
Query: 224 YSHLNDIDGVERVFYEMCNEC---EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
+ +D + F+EM + +D TY+++ + KA ++A ++LE+
Sbjct: 275 FGKAGKVDMSWKFFHEMKSHGLMPDD----VTYTSMIGVLCKANRLDEAVELFEQLEQ-- 328
Query: 281 PRDRK-----AYHFLISLYCNTSNLDAVNRVWGIL-----KSTFPPTNTSYLVLLQALAK 330
+RK AY+ +I Y + D +G+L K + P +Y +L L K
Sbjct: 329 --NRKVPCAYAYNTMIMGYGSAGKFD---EAYGLLERQKAKGSIPSV-IAYNCILTCLGK 382
Query: 331 LNAIDILKQCFEE 343
++ + FEE
Sbjct: 383 KRRVEEALRIFEE 395
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 81/194 (41%), Gaps = 3/194 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ + Y A+++ +CK +A L E+M V + ++ ++ + ++ L
Sbjct: 613 DTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLF 672
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ K I L+ + Y + + + ID + E+ + + T++ L VK
Sbjct: 673 EEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY-TWNCLLDALVK 731
Query: 263 AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTS 320
AE +A + + ++++K P ++ Y LI+ C + W + K P +
Sbjct: 732 AEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTIT 791
Query: 321 YLVLLQALAKLNAI 334
Y ++ LAK I
Sbjct: 792 YTTMISGLAKAGNI 805
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 55/306 (17%), Positives = 128/306 (41%), Gaps = 14/306 (4%)
Query: 77 DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG 136
+++ CV+S RK R A ++I+ M K +++ + + + ++ F+
Sbjct: 165 ELVANCVKS-RKL---REAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQ 220
Query: 137 LSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
+ E Y N + + L+ + +E + AL+L ++M + V +N + + G+
Sbjct: 221 MQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGK 280
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ ++MK + D++TY + N +D +F ++ + C + Y+
Sbjct: 281 VDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAY-AYN 339
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPRDR----KAYHFLISLYCNTSNLDAVNRVWGIL 310
+ Y A F++ A LE K + AY+ +++ ++ R++ +
Sbjct: 340 TMIMGYGSAGKFDE---AYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 396
Query: 311 KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYE 370
K P +Y +L+ L + ++ + ++ E ++ +++I + E
Sbjct: 397 KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE 456
Query: 371 EAALIF 376
EA IF
Sbjct: 457 EACSIF 462
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 10/236 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKM-DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY L++ CKE + A+ LF +M + NTV +N+L + + R+G+ ++ L+ +
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M + S D +TY M + L +D Y++ N+ K S+
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDA----YDLLNQMTRKGLTPDVVTFTSLMDGLC 302
Query: 265 LFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS 320
+ A+ L EM+ + Y+ ++ YC + L+ R + + + PP S
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA-RKFMLEEMDCPPNVVS 361
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+ ++++ L K+N + EE R + D+ + +I ++ +EA ++
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVY 417
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 12/191 (6%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+ CK E+AL KM F + + + + + R + +M
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
RN++ + +TY V + +D + +M +C TY++L S KA
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT--AVTYNSLISGLCKA-- 128
Query: 266 FEKAELALKKLEEMK-----PRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNT 319
E+A A LEEM P D Y LI+ +C + D RV+ ++ F P
Sbjct: 129 -ERASEAYDLLEEMVYSGCIP-DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 320 SYLVLLQALAK 330
+Y L+ L K
Sbjct: 187 TYSCLIDGLCK 197
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 159/426 (37%), Gaps = 21/426 (4%)
Query: 66 AYIMEGKTVRK----DMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
A I GK V K D+ Y + +L R A + +E M +R + + + V +D
Sbjct: 30 ALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLID 89
Query: 120 LTAKTNGIAAAEKYFNGL-SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
K + A + + + TY +L++ CK A L E+M + +
Sbjct: 90 GLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPD 149
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFY 238
+ L T + + + + + Q+ R D +TY + + +F
Sbjct: 150 IFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFG 209
Query: 239 EMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNT 297
M TY++L S + + ++A L+++ E D Y L++ +C
Sbjct: 210 RMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKL 269
Query: 298 SNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
+ L DA + + + + P ++ L+ L + N + E + S +
Sbjct: 270 ARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTY 329
Query: 357 DVIIRAYLQKDMYEEA-ALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEA 415
+ I+ Y + + EEA + N SF I +++ + ME
Sbjct: 330 NTILDGYCRANQLEEARKFMLEEMDCPPNVV--------SFNIMIRGLCKVNRSSEAME- 380
Query: 416 ALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA-EEFCKVLKSLNCLDFS-AYSLLIKTY 473
+ EA++ P V T EK VD A + K+L+ CL S YS L+
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGL 440
Query: 474 IAAGKL 479
AG L
Sbjct: 441 CNAGML 446
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/429 (19%), Positives = 165/429 (38%), Gaps = 43/429 (10%)
Query: 5 NQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKLYKRLSALGAT-----GGS 59
NQ + R+ T+++R F +G+ + L +++S +T GG
Sbjct: 78 NQHGFVKDPERKQRRHSGGDGRTINKR-GGVVGFRSGDANDLVEKVSTNCSTKWLSYGGC 136
Query: 60 VTGALNAY-----IMEGKTVRKDMLEYCVRS--LRKFGRYRHALEVIEWMESRKMH-FSY 111
+ L A + E + ++ L RS L++ + ALE+ EW++ + + +
Sbjct: 137 IPSILRALETVKDLDEALSPWEESLSNKERSIILKEQSCWERALEIFEWLKKKGCYELNV 196
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTYGALLNCYCKELMTERALALFEK 169
+ + L + K E ++ + TYG L++ Y K +TE AL ++
Sbjct: 197 IHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLTEEALHWLDR 256
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL------------------------VNQM 205
M++ + V + Y + G+ +K V
Sbjct: 257 MNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLGKTLKDEGKTSEPTATSAVESA 316
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
Q ++ L + TY + +Y + F M E T++ + I
Sbjct: 317 SQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIP-NTVTFNTMIHICGNHGQ 375
Query: 266 FEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLV 323
E+A ++K+EE++ P D + Y+ LISL+ +N+D + +K + P SY
Sbjct: 376 LEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRT 435
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
LL A + + + + E + R D + R Y++ M +++ L F
Sbjct: 436 LLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEG 495
Query: 384 NASARFFKS 392
N S+ + +
Sbjct: 496 NMSSECYSA 504
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 99/224 (44%), Gaps = 13/224 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G V+ D++ Y + + G R A+ + + + + + + + L K
Sbjct: 629 MIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGY 688
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A++ + L SE + Y+ +++ Y + M ++A +FE + K N +F
Sbjct: 689 LEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKR-KGDANEFSFAM 747
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ MY R+G+ ++ +V +M++ + D L+Y + Y+ F EM
Sbjct: 748 MLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAA 807
Query: 245 --EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA 286
D C T+ +L + VK + ++ A+ KLE + +D ++
Sbjct: 808 IQPDDC---TFKSLGVVLVKCGIPKQ---AVGKLEMTRKKDPQS 845
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N +T+ +++ CKE A +LF +M E+ L + V FN+L Y + G+ ++V
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
LV +M++ D +TY + + ++ F M E T+S +
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMANVVTFSTFVDAF 303
Query: 261 VKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNL-DAVNRVWGILKSTFP 315
K L + A+K +M+ R Y LI C L DA+ + +++ P
Sbjct: 304 CKEGLVRE---AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360
Query: 316 PTNTSYLVLLQALAK 330
+Y VL+ L K
Sbjct: 361 LNVVTYTVLVDGLCK 375
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 3/191 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRY 145
K G R A+++ M R M + + +D T K + A + + N
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L++ CKE A + M++ N + + L + EK L+++M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K + + LD Y +Q +++ +D + + +M +E + + Y+ + K+
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM-DESGLEPNYIIYTTMMDACFKSGK 483
Query: 266 FEKAELALKKL 276
+A L+K+
Sbjct: 484 VPEAIAMLQKI 494
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/404 (18%), Positives = 153/404 (37%), Gaps = 49/404 (12%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K G + A +++ ME + + + +D K + A N + + +
Sbjct: 185 MNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSI 244
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +TY L++ CK E LF +M L N FN++ + G+ E
Sbjct: 245 PPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEE 304
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
++ M ++ + D +TY + + Y +D +F M N+
Sbjct: 305 IMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK----------------- 347
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNT 319
++P D +Y+ LI+ Y +D +V I + P+
Sbjct: 348 -----------------SIEP-DIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
+ VLL L +L + F+E S D+ ++ Y + + EEA F+
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449
Query: 380 KKRANASARFFKSRESFMIYYLRSRQL--DLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
++R + + IY L + L++ A + P +T
Sbjct: 450 ERR--------REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMIS 501
Query: 438 FFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKLA 480
+ +E +D A++ + ++ CL D Y+++++ ++ + K++
Sbjct: 502 GYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVS 545
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 119/309 (38%), Gaps = 7/309 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ K++ D+ Y + +L K ++ + + M ++ + F +D K
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ AE+ + E + TY +++ Y +RA +F+ M + +++N
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNI 358
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L Y R + ++ + ++ Q+ + +T V + L + F EM +
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAV 303
+ T+ L Y K L E+A KLE + + + Y +I C LD
Sbjct: 419 HIPDLY-THCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA 477
Query: 304 NRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
+ + L P +Y ++ + +D K + E D R +VI+R
Sbjct: 478 HATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRG 537
Query: 363 YLQKDMYEE 371
+L+ + E
Sbjct: 538 FLRSNKVSE 546
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 164/406 (40%), Gaps = 23/406 (5%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G A V ++ SR++ ++V + ++ + A F+ L E N +
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L++ CK+ ++A L E+M + V +N L + G+ E+ + L + +
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ R ++ + +TY + Y + ++ EM + Y+ + + K E
Sbjct: 697 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF-IYNVILNFCCKEEK 755
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVL 324
FEKA +++ E +++ LI YC + L N + +++ F P + +Y L
Sbjct: 756 FEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRAN 384
+ K + K+ + E + R + ++ Y E + +F +
Sbjct: 816 IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI 875
Query: 385 ASARFFKSRESFMIYYLRSRQLDLALNEMEAA-LSEAKQFHWRPMQVTV-DTFFRFFEEE 442
+ M YY+ N MEA L + PM V D + ++
Sbjct: 876 EPDK--------MTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKK 927
Query: 443 KDVDGAEEFCKVLKSLNCLDFSAYSLLIKT--YIAAG-KLASDMRQ 485
EEF +VLK LN + S + L + T IA G ++A +M +
Sbjct: 928 ------EEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDE 967
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 121/299 (40%), Gaps = 17/299 (5%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA-----EKYFNGLSEYAKNRYTYGA 149
A E+++ M+ RK+ + ++V ++ + + E NGL N Y
Sbjct: 409 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK---PNAVVYTT 465
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
L+ + KE E + + E+M E L + +N+L + + + E+ R + +M +R
Sbjct: 466 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK-AELFEK 268
+ + TY ++ YS +++ +R F EM + C Y+ L + K + E
Sbjct: 526 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS-CGVLPNVGIYTALIEGHCKEGNVTEA 584
Query: 269 AELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL----KSTFPPTNTSYLVL 324
+ L +D + Y LI S ++ +GI + P +Y L
Sbjct: 585 FSVFRFILSRRVLQDVQTYSVLIH---GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 641
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ K +D Q EE + + D+ +++I + E A +F++ + R
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 700
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 61/345 (17%), Positives = 139/345 (40%), Gaps = 16/345 (4%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N TY ++ C+ + + A+ L M + + + ++ L + + + +
Sbjct: 247 SPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKL 306
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
++ +M + + +TY + + DI+ R+ EM C + ++ L +
Sbjct: 307 MLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV-ACGIEANLIIWNTLLNGV 365
Query: 261 VKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL----KSTFP 315
KA EKA E+ + +E+ D + Y LI +C N+ R + +L K
Sbjct: 366 CKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA---RAFELLDEMKKRKLA 422
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
PT +Y V++ L + + E + + ++ A+ ++ EE+ +I
Sbjct: 423 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 482
Query: 376 FNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTF 435
+++ F S +I + ++++++ E L E + RP T F
Sbjct: 483 LERMREQGILPDVF--CYNSLIIGFCKAKRME----EARTYLMEMLERRLRPNAHTYGAF 536
Query: 436 FRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKL 479
+ + +++ A+ + + S L + Y+ LI+ + G +
Sbjct: 537 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 581
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 122/284 (42%), Gaps = 17/284 (5%)
Query: 98 VIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYC 155
++E +E R ++T + ++D +K + A++YFN + N Y AL+ +C
Sbjct: 518 LMEMLERRLRPNAHT-YGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 576
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
KE A ++F + + L + ++ L R G+ + + ++++++ + +
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
TY + ++D ++ EMC + + TY+ L KA E+A+
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINP-DIVTYNILIDGLCKAGEIERAKNLFDD 695
Query: 276 LE--EMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAK-- 330
+E + P + Y ++ YC + N A ++ +L PP Y V+L K
Sbjct: 696 IEGRGLTP-NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEE 754
Query: 331 --LNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
A+D+ ++ E+ + S+ + +I Y + +EA
Sbjct: 755 KFEKALDLFQEMLEKGFASTVSF-----NTLIEGYCKSGKLQEA 793
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/330 (18%), Positives = 127/330 (38%), Gaps = 87/330 (26%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGAL 150
R AL +E M+S + + +++ + KTN +A+K F N Y +
Sbjct: 305 RGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNI 364
Query: 151 LNCYCKELMTERA-----------------------------------LALFEKMDELKF 175
++ +C+ +RA L +FE++ E F
Sbjct: 365 IHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGF 424
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ +++ L +Y+++G+ K + +M+ I +N TY + + + HL+D
Sbjct: 425 RPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFS 484
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYC 295
+F +M +K+ L +P DR Y+ L+ +C
Sbjct: 485 IFEDM--------------------IKSGL--------------QP-DRAIYNLLVEAFC 509
Query: 296 NTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALA-------KLNAIDILKQCFEEWESR 347
N+D R++ +K P+N ++ +++ A L+ +D++++ S
Sbjct: 510 KMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRR------SG 563
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
C+ M + +I ++K E A + +
Sbjct: 564 CAPTVMTY-NALIHGLIRKHQVERAVSVLD 592
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 10/204 (4%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLN 152
A+ V++ M + + + + + A + I A +YF + E + Y Y LL
Sbjct: 587 AVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 646
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
CK + ALA+ +M K NT +N L + R G + L+ QMK+ I
Sbjct: 647 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPP 706
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
+ T+ ++ + D+ E V EM + K T++ L + K L ++ A
Sbjct: 707 NIHTFTSYINACCKAGDMQRAENVIQEMAD-VGLKPNVKTFTTLIKGWAKVSLPDR---A 762
Query: 273 LKKLEEMKP----RDRKAYHFLIS 292
LK EEMK D AYH L++
Sbjct: 763 LKCFEEMKSAGLKPDEAAYHCLVT 786
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 7/243 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R +G ++ Y K A A FE M N F +L Y V
Sbjct: 252 SRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCV 311
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK + + +TY + + Y ND + +++F E + D YSN+ + +
Sbjct: 312 EEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKL-DNLNGIIYSNIIHAHCQ 370
Query: 263 AELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+ ++AE ++++EE P D YH ++ Y + V+ LK F P+
Sbjct: 371 SGNMDRAEELVREMEEDGIDAPID--VYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSI 428
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
SY L+ K+ + +E ES ++ + ++I ++ + A IF +
Sbjct: 429 ISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFED 488
Query: 379 AKK 381
K
Sbjct: 489 MIK 491
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 60/332 (18%), Positives = 124/332 (37%), Gaps = 40/332 (12%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G+ AL V + MES + + +++ ++ + A A F + S +R
Sbjct: 440 KIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRA 499
Query: 146 TYGALLNCYCKELMTERALALFEKM-----------------------------DELKFL 176
Y L+ +CK +RA+ +FE+M D L +
Sbjct: 500 IYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLM 559
Query: 177 ------GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
+ +N L +R Q E+ ++++M I+ + TY + M+ Y+ DI
Sbjct: 560 RRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDI 619
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHF 289
G ++ E K Y L K+ + A +++ K PR+ Y+
Sbjct: 620 -GKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNI 678
Query: 290 LISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRC 348
LI + ++ +A + + + + PP ++ + A K + + +E
Sbjct: 679 LIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVG 738
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
+++ +I+ + + + + A F K
Sbjct: 739 LKPNVKTFTTLIKGWAKVSLPDRALKCFEEMK 770
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 134/325 (41%), Gaps = 14/325 (4%)
Query: 58 GSVTGALN-AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G ++ AL + +M+ + V+ ++ Y + K + +A V E M M D
Sbjct: 499 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK---PDV 555
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRY-----TYGALLNCYCKELMTERALALFEK 169
+Y ++ A G+ ++ + E K R+ T+ ++N + K R+L +F+
Sbjct: 556 ILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDM 615
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M + FN L + Q EK ++++M +S + TY MQ Y+ + D
Sbjct: 616 MRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 675
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYH 288
F + NE + TY L K+ + A K++ PR+ Y+
Sbjct: 676 TGKAFEYFTRLQNEGLE-VDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 734
Query: 289 FLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI + ++ +A + + + K P +Y + A +K ++ Q EE E+
Sbjct: 735 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 794
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEA 372
+++ +I+ + + + E+A
Sbjct: 795 GVKPNIKTYTTLIKGWARASLPEKA 819
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+TY ALL CK + ALA+ ++M N+ +N L + R G + L+ Q
Sbjct: 696 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 755
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK+ + D TY ++ + S D++ + EM K TY+ L + +A
Sbjct: 756 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARAS 814
Query: 265 LFEKAELALKKLEEMKP----RDRKAYHFLIS 292
L EK AL EEMK D+ YH L++
Sbjct: 815 LPEK---ALSCYEEMKAVGLKPDKAVYHCLLT 843
>gi|242032435|ref|XP_002463612.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
gi|241917466|gb|EER90610.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
Length = 638
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 140/372 (37%), Gaps = 20/372 (5%)
Query: 26 ETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRS 85
+TVS R GN ++ + S + G + + +ME T
Sbjct: 55 DTVSYRYIVDAFASAGNLSRVAELFSEMAVMGNTADASAYLGLMEAHT------------ 102
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-SEYAKNR 144
+ G A+ V+ M++ + + V LDL + + F + + +
Sbjct: 103 --RVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTAVPPDT 160
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY L Y + + LF M E + V N+ R G E R ++
Sbjct: 161 ATYNVLFRVYGDGGFFKEVVELFHDMLETGVEPDMVTCENVMAACGRGGLHEDAREVLEY 220
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M + + Y +++ H + V + M E TY+ LA Y +
Sbjct: 221 MTREGMVPTADAYTGLVEALGHAAMYEEA-YVAFNMMTEIGSLPTLETYNTLAFAYARGG 279
Query: 265 LFEKAELALKKLEEMKP--RDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSY 321
LF++AE ++ +++ ++ LI YC + LD AV + KS F P S
Sbjct: 280 LFQEAEAIFSRMSNNAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSL 339
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK- 380
+L A ID K+ FEE +S + + +++ Y + D + +A + K
Sbjct: 340 EGVLNAYCIAGVIDESKEQFEELQSSVTLPSIIAYCMMLSLYARNDRWADAYDMLEEMKT 399
Query: 381 KRANASARFFKS 392
RA+++ + S
Sbjct: 400 NRASSTHQVIAS 411
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 21/316 (6%)
Query: 168 EKMDELKFLGNTV---AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
E E+ +GNT A+ L + R+G + ++ QM+ + TY V + Y
Sbjct: 77 ELFSEMAVMGNTADASAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLY 136
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF-EKAELALKKLEEMKPRD 283
DGV +F EM TY+ L +Y F E EL LE D
Sbjct: 137 GRQGRFDGVRELFREMRTAVPPDT--ATYNVLFRVYGDGGFFKEVVELFHDMLETGVEPD 194
Query: 284 RKAYHFLISLYCNTSNL--DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+++ C L DA + + + PT +Y L++AL + F
Sbjct: 195 MVTCENVMAA-CGRGGLHEDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAF 253
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESF---MI 398
S + + + AY + +++EA IF+ R + +A K+++SF +
Sbjct: 254 NMMTEIGSLPTLETYNTLAFAYARGGLFQEAEAIFS----RMSNNAGIQKNKDSFDALIE 309
Query: 399 YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA-EEFCKVLKS 457
Y + QLD A+ A E ++ + P + +++ + +D + E+F ++ S
Sbjct: 310 AYCQGAQLDDAVK----AYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSS 365
Query: 458 LNCLDFSAYSLLIKTY 473
+ AY +++ Y
Sbjct: 366 VTLPSIIAYCMMLSLY 381
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 83 VRSLRKFGRYRHALEVIEWM-----ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+RS K GR ++ + W+ S +YT F V + L + + A + F+ +
Sbjct: 28 LRSCTKEGR----VDCVSWLCKDMVASGVSPETYT-FNVLIGLLCDSGCLDDARELFDKM 82
Query: 138 SEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
E N Y++G L+ YC+ T + L L +M L F N V +N L + + + G+
Sbjct: 83 PEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKT 142
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+ LV++M++ +S D +T+ + + + R+F +M
Sbjct: 143 DDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDM 187
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 168/466 (36%), Gaps = 84/466 (18%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN------- 135
+ S K G+ A ++++ M + F + + + A + F
Sbjct: 133 ISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEV 192
Query: 136 -GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG- 193
GL + N TY +L +CKE M E A ALFEKM + L N ++N +R+G
Sbjct: 193 LGLPQ--PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGK 250
Query: 194 ----------------QPE------------------KVRPLVNQMKQRNISLDNLTYIV 219
+P R L+ M + D +TY
Sbjct: 251 LLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTT 310
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN---LASIYVKAELFEKAELALKKL 276
+ Y H + V EM D C Y+ L S++ + + E EL K
Sbjct: 311 LLHGYCHTGKVSEANNVLREM---MRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367
Query: 277 EEMKPRDRKAYHFLISLYCNTSNLDA----VNRVW-------GILKSTFP---------- 315
E+ D + +I CN LD VN +W G L +++
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427
Query: 316 ---PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P SY ++ L K + K+ F E + D + DV I ++ ++ A
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487
Query: 373 ALIFNNAKKRA-NASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRP-MQV 430
+ + +K+ N + + + S +I L S+ + E+ + E ++ P + +
Sbjct: 488 FRVLKDMEKKGCNKTLQTYNS----LIMGLGSKN---QIFEIYGLIDEMRERGVSPDVSI 540
Query: 431 TVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAA 476
+ E + D ++L+ + S++S+LIK + A
Sbjct: 541 YNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKA 586
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 3/198 (1%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ + TY +L++ CK +A A+ + M + + NT +N + Y LGQ E+
Sbjct: 234 FPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAV 293
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L+ +M + D +TYI+ +Q Y + VF M + + K T Y L
Sbjct: 294 RLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ-KPNSTIYHILLHG 352
Query: 260 Y-VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
Y K L + +L + + P + +A++ LI Y +D A+ + ++ P
Sbjct: 353 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 412
Query: 318 NTSYLVLLQALAKLNAID 335
SY ++ L K+ ++
Sbjct: 413 VVSYSTVIHILCKIGRVE 430
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 100/250 (40%), Gaps = 8/250 (3%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKM---DELKFLGNTVAFNNLSTMYLRLGQPE 196
Y + ++Y AL+ C E ++ AL L M N V+++ + + + G+ +
Sbjct: 161 YTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVD 220
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
K L ++M + D +TY + ++ E + M ++ TY+ +
Sbjct: 221 KAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGV-MPNTRTYNIM 279
Query: 257 ASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKST 313
Y E+A LKK+ ++P D Y LI YC V+ +++
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQP-DVVTYILLIQYYCKIGRCAEARSVFDSMVRKG 338
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P +T Y +LL A A+ ++ + ++ R +++I AY + ++A
Sbjct: 339 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 398
Query: 374 LIFNNAKKRA 383
F ++
Sbjct: 399 TAFTEMRQNG 408
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I+ A KYF+ + + +Y +++C+ K ERAL + M E F N V FN
Sbjct: 406 ISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNT 465
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L YL+LG + + + + + D +T+ + H + +D F EM +E
Sbjct: 466 LINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEM-SEW 524
Query: 245 EDKCRWTTYSNLASIYVKAELFEKA-ELALK-KLEEMKPRDRKAYHFLISLYCNTSNLDA 302
+ TY+ L A KA EL K K++ + P D +++ I +C ++
Sbjct: 525 GVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITP-DAYSFNAPILSFCRMRKIEK 583
Query: 303 VNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
+++ + + P + +Y L++AL +D K+ ES
Sbjct: 584 AQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMES 628
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 170/408 (41%), Gaps = 31/408 (7%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME +R +++ Y V R A+ V+E M+ + + S T+ A Y L
Sbjct: 241 MERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGV--SATE-ATYRSLVHGAFR 297
Query: 127 IAAAEKYFNGLSEYAKNRYT-----YGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
E+ + LSE+ ++ T Y LL C K M + A+ L +KM + +L +
Sbjct: 298 CLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTT 357
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
F+ + +++ + + LV+ ++ +L YI+ ++S+ DI + F +M
Sbjct: 358 FSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMV 417
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA-------YHFLISLY 294
++ S++ S + + F KA + LE +K ++ LI+ Y
Sbjct: 418 SD-------GLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGY 470
Query: 295 CNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
N+ DA + +++ P ++ L+ L + +D CF E ++
Sbjct: 471 LKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNV 530
Query: 354 RLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEM 413
+ +V+I +A + N K + S + ++ + R R+++ A
Sbjct: 531 QTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAY--SFNAPILSFCRMRKIEKA---- 584
Query: 414 EAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+ ++ ++ P T + + +E+ VD A+E ++S++C+
Sbjct: 585 QKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCI 632
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 126/306 (41%), Gaps = 16/306 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--- 139
++ L K GR AL ++E M R ++ ++ K + I A+++ G+
Sbjct: 381 IQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKIS 440
Query: 140 -YAKNRYTYGALLNCYCKELMTERALALFEKM-DELKFLGNTVAFNNLSTMYLRLGQPEK 197
+ + ++Y +LLN CK +A A+F M E F+ + V+++ L + ++ + +
Sbjct: 441 SRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGR 500
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNL 256
L QM N + TY ++ I + V+ EM C TYS L
Sbjct: 501 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPD--VITYSTL 558
Query: 257 ASIYVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVW-GILK 311
+ L K + A + E M R + Y+ L+ C S D + ++ +++
Sbjct: 559 IHGF---SLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 615
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
P +Y LL + I+ + F+E S+ D+ + +++ + + E
Sbjct: 616 RGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 675
Query: 372 AALIFN 377
A +F
Sbjct: 676 AKQLFQ 681
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 7/206 (3%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYG 148
++ A E+ E M SR + + L K + A + F + E +R TY
Sbjct: 567 KHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYT 626
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
LL +C E+A+ +F++M + VA+N L + R G+P + + L M R
Sbjct: 627 TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSR 686
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR--WTTYSNLASIYVKAELF 266
D +++ + + S +D VF M E + C TY++L +
Sbjct: 687 QCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM--EQDHGCSPDLVTYNSLIFGLCGEQRL 744
Query: 267 EKAELALKKLEEMK-PRDRKAYHFLI 291
+A K+++ +K D A++ L+
Sbjct: 745 SEAMKVFKEIDRLKLSPDPHAFNVLL 770
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 80/450 (17%), Positives = 164/450 (36%), Gaps = 45/450 (10%)
Query: 70 EGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA 129
+GK+ ++ + ++ LR G AL W+++R + LD + +
Sbjct: 91 DGKSSCRETVGAVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQ 147
Query: 130 AEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A + F + N +TY L+ C E ++ A+ F +M + F ++ + ++
Sbjct: 148 AGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTE 207
Query: 188 MYLRLGQPE--------------------KVRPLVN---------------QMKQRNISL 212
G+ K LVN M +
Sbjct: 208 CLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKP 267
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
D Y + ++ L ++D ++F EM E + ++ S K+ E+A A
Sbjct: 268 DATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEA 327
Query: 273 LKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKL 331
+ ++E + Y LI L + +D A I P++ + ++Q L K
Sbjct: 328 CRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKA 387
Query: 332 NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFK 391
+D E R DM ++I + D +EA ++ ++ +
Sbjct: 388 GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCF 447
Query: 392 SRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
S S + +++++ A +SE + P V+ F + ++ AE+
Sbjct: 448 SYNSLLNSLCKAKKVHQAFAIFSTMVSERS---FVPDVVSYSILIDGFCKIDELGRAEKL 504
Query: 452 CKVLKSLNCL-DFSAYSLLIKTYIAAGKLA 480
K + LNC+ + + Y+ + + G++A
Sbjct: 505 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIA 534
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 136/302 (45%), Gaps = 7/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + AL ++ ME ++ ++ ++L+ K + A F+ L S ++ +
Sbjct: 21 KEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFSPDLV 80
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y A++N + K + A +L +M + NTV+++ L TMY+ + + + +M
Sbjct: 81 AYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKFLEALTVFAEM 140
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ LD T + + Y L +++F+ M + + +Y+ L +Y AEL
Sbjct: 141 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM-RKMGIEPNVVSYNTLLRVYGDAEL 199
Query: 266 FEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYL 322
F +A + L +L + K ++ Y+ ++ +Y T + N + ++S P + +Y
Sbjct: 200 FGEA-IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 258
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ +K+ +D F++ S D L +I AY + + A + + K+
Sbjct: 259 TIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP 318
Query: 383 AN 384
N
Sbjct: 319 DN 320
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +RYTY L+ + KE + + ALA +KM++ + G+ V ++NL + +L K
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYS 254
+ +++K+ S D + +Y+ + ++ G ++F E + +E +YS
Sbjct: 66 IFSRLKRSGFSPD-------LVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYS 118
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKS 312
L ++YV+ + F +A ++ E+K D + +I +Y +++ WG+ K
Sbjct: 119 TLLTMYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 178
Query: 313 TFPPTNTSYLVLLQA 327
P SY LL+
Sbjct: 179 GIEPNVVSYNTLLRV 193
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 89/196 (45%), Gaps = 7/196 (3%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+N TY +++ Y K L E+A L ++M N++ ++ + +++ ++G+ ++ L
Sbjct: 217 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWSKIGKLDRAAML 276
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+++ + +D + Y + +Y + +R+ +E+ ++ R T LA
Sbjct: 277 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHEL-KRPDNIPRDTAIHILAG--- 332
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST--FPPTNT 319
+ E + + ++ + +D + +I L+ V V+ ++ FP +N
Sbjct: 333 SGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYSNVVEVFDKMRGLGYFPDSNV 392
Query: 320 SYLVLLQALAKLNAID 335
+ LV L A KL+ D
Sbjct: 393 TALV-LNAYGKLHEFD 407
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 122/293 (41%), Gaps = 11/293 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G+ ALE+ + ME + + + +D K + A F G+ + N T+
Sbjct: 173 GKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTF 232
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+L++ K + A +L+EKM + + + + +L + + G+ E + +M
Sbjct: 233 SSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 292
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF- 266
S D +M + + +F E+ N +YS L VKA L
Sbjct: 293 TGCSPDLTLINTYMDCVFKAGETEKGRALFREI-NAHGFIPDARSYSILIHGLVKAGLAN 351
Query: 267 EKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS----TFPPTNTSYL 322
E EL E+ D AY+ +I +C + VN+ + +L+ PPT +Y
Sbjct: 352 ETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGK---VNKAYQLLEEMKVKGHPPTVVTYG 408
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
++ LAK++ +D FEE +S ++ + +I + + +EA LI
Sbjct: 409 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLI 461
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 81/194 (41%), Gaps = 3/194 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ + Y A+++ +CK +A L E+M V + ++ ++ + ++ L
Sbjct: 368 DTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLF 427
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ K I L+ + Y + + + ID + E+ + + T++ L VK
Sbjct: 428 EEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY-TWNCLLDALVK 486
Query: 263 AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTS 320
AE +A + + ++++K P ++ Y LI+ C + W + K P +
Sbjct: 487 AEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTIT 546
Query: 321 YLVLLQALAKLNAI 334
Y ++ LAK I
Sbjct: 547 YTTMISGLAKAGNI 560
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 106/252 (42%), Gaps = 7/252 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
V LRK G+ AL +++ + + + + +D K AE F+ + +
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGL 398
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY L++ +C+ + AL+ +M ++ + +N+L + + G
Sbjct: 399 CPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAES 458
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+ +M + + +TY M Y I+ R+++EM + + T++ L S
Sbjct: 459 LMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIY-TFTTLLSGL 517
Query: 261 VKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
+A L A ++ E +KP +R Y+ +I YC N+ A + +++ P
Sbjct: 518 FRAGLIRDAVKLFTEMAEWNVKP-NRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPD 576
Query: 318 NTSYLVLLQALA 329
SY L+ L
Sbjct: 577 TYSYRPLIHGLC 588
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 99/268 (36%), Gaps = 22/268 (8%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
M YC + G+ AL + M + + S F L + I A K F +
Sbjct: 479 MGGYCSK-----GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEM 533
Query: 138 SEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
+E+ NR TY ++ YC+E +A +M E + +T ++ L GQ
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
+ + V+ + + N L+ + Y + + E E + C+D +
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCR-------EGKLEEALSVCQDMGLRGVDLD 646
Query: 256 LA--SIYVKAELFEKA-ELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG 308
L + + L K ++ L L+EM R D Y +I T + +W
Sbjct: 647 LVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 309 I-LKSTFPPTNTSYLVLLQALAKLNAID 335
+ + P +Y ++ L K ++
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVN 734
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 17/265 (6%)
Query: 74 VRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
+R D+ Y +RSL + A E+I ME+ + + V +D K + A
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 132 KYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
L+ E + TY L+ CK E L + ++M L+F + A ++L
Sbjct: 283 GIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGL 342
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNECEDK 247
+ G+ E+ LV ++ + +S + Y + S + D E +F M C +
Sbjct: 343 RKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPND 402
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAV 303
TYS L ++ + K + AL L EM K Y+ LI+ +C ++ A
Sbjct: 403 ---VTYSILIDMFCRR---GKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAA 456
Query: 304 NRVWG-ILKSTFPPTNTSYLVLLQA 327
+ ++ PT +Y L+
Sbjct: 457 ESLMAEMINKKLEPTVVTYTSLMGG 481
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N +T+ +++ CKE A +LF +M E+ L + V FN+L Y + G+ ++V
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
LV +M++ D +TY + + ++ F M E T+S +
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMANVVTFSTFVDAF 303
Query: 261 VKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNL-DAVNRVWGILKSTFP 315
K L + A+K +M+ R Y LI C L DA+ + +++ P
Sbjct: 304 CKEGLVRE---AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360
Query: 316 PTNTSYLVLLQALAK 330
+Y VL+ L K
Sbjct: 361 LNVVTYTVLVDGLCK 375
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 122/298 (40%), Gaps = 8/298 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
V + K G R A+++ M R M + + +D T K + A + +
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY L++ CKE A + M++ N + + L + EK
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+++MK + + LD Y +Q +++ +D + + +M +E + + Y+ +
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM-DESGLEPNYIIYTTMMDAC 478
Query: 261 VKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
K+ +A L+K+ + +P + Y LI C ++D A++ + P
Sbjct: 479 FKSGKVPEAIAMLQKILDSGFQP-NVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPN 537
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYL-QKDMYEEAAL 374
+Y L+ L K ++ Q F E + S D + ++ YL Q ++++ AL
Sbjct: 538 VQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 16/247 (6%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTN----GIAAAEKYFNGLS 138
++ L + A ++ M+ + +Y + +D K+ IA +K + S
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILD--S 497
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ N TY AL++ CK + A++ F KM +L N A+ L + G +
Sbjct: 498 GFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEA 557
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSY---SHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
L N+M + +SLD + Y + Y +L+D ++ + + + C Y+
Sbjct: 558 VQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC----YTC 613
Query: 256 LASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
S + + +A ++ + P DR Y+ LIS Y NL+ + ++
Sbjct: 614 FISGFCNLNMMPEAREVFSEMIGHGIAP-DRAVYNCLISKYQKLGNLEEAISLQDEMERV 672
Query: 314 FPPTNTS 320
P S
Sbjct: 673 LPSCTDS 679
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 123/293 (41%), Gaps = 15/293 (5%)
Query: 94 HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALL 151
H L ++ M +H + F++ + AK + A F+ + + N TYGA++
Sbjct: 356 HGL--LDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
CK E A+ FE+M + + +N+L + E+ L+ +M R I
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
L+ + + + S+ + E++F E+ K TY+ L + Y L K +
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLF-ELMVRIGVKPNVITYNTLINGYC---LAGKMDE 529
Query: 272 ALKKLEEM-----KPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLL 325
A+K L M KP + Y LI+ YC S + DA+ + S P +Y ++L
Sbjct: 530 AMKLLSGMVSVGLKP-NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 326 QALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
Q L + K+ + + ++ ++I+ + + ++A +F N
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 641
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 113/288 (39%), Gaps = 5/288 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L ++ A E+I M R + + F +D K + +EK F +
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY L+N YC + A+ L M + NTV ++ L Y ++ + E
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M+ +S D +TY + +Q + ++ + E + +TY+ +
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI-TESGTQIELSTYNIILHGL 626
Query: 261 VKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTN 318
K +L + A + L M + + + ++ +I D ++ S P
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 686
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
+Y ++ + + ++ L Q F E + D + + I+R LQ+
Sbjct: 687 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 103/248 (41%), Gaps = 10/248 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLG---NTVAFNNLSTMYLRLGQPEKVR 199
N ++Y LL C E ++ AL L M + + G + V++ + + + G +K
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLAS 258
++M R I D +TY + + +D V M N C TY+++
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC--MTYNSILH 274
Query: 259 IYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFP 315
Y + ++A LKK+ + ++P D Y L+ C +++ + K
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEP-DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P T+Y LLQ A A+ + + D + ++I AY ++ ++A L+
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLV 393
Query: 376 FNNAKKRA 383
F+ +++
Sbjct: 394 FSKMRQQG 401
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 98/263 (37%), Gaps = 14/263 (5%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI---AAAEKYFNGLSE-----YAK 142
R + ALE++ M + S D Y T NG ++K ++ E
Sbjct: 173 RSQEALELLHMMADDRGGGSPPDVVSY---TTVINGFFKEGDSDKAYSTYHEMLDRGILP 229
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ TY +++ CK ++A+ + M + + + + +N++ Y GQP++ +
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY-V 261
+M+ + D +TY + M ++F M K TTY L Y
Sbjct: 290 KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL-KPEITTYGTLLQGYAT 348
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTS 320
K L E L + D + LI Y +D V+ ++ P +
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 321 YLVLLQALAKLNAIDILKQCFEE 343
Y ++ L K ++ FE+
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQ 431
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N +T+ +++ CKE A +LF +M E+ L + V FN+L Y + G+ ++V
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
LV +M++ D +TY + + ++ F M E T+S +
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE-GVMANVVTFSTFVDAF 303
Query: 261 VKAELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNL-DAVNRVWGILKSTFP 315
K L + A+K +M+ R Y LI C L DA+ + +++ P
Sbjct: 304 CKEGLVRE---AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360
Query: 316 PTNTSYLVLLQALAK 330
+Y VL+ L K
Sbjct: 361 LNVVTYTVLVDGLCK 375
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 119/295 (40%), Gaps = 7/295 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
V + K G R A+++ M R M + + +D T K + A + +
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY L++ CKE A + M++ N + + L + EK
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+++MK + + LD Y +Q +++ +D + + +M +E + + Y+ +
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM-DESGLEPNYIIYTTMMDAC 478
Query: 261 VKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
K+ +A L+K+ + +P + Y LI C ++D A++ + P
Sbjct: 479 FKSGKVPEAIAMLQKILDSGFQP-NVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPN 537
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+Y L+ L K ++ Q F E + S D + ++ YL++ +A
Sbjct: 538 VQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 16/247 (6%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTN----GIAAAEKYFNGLS 138
++ L + A ++ M+ + +Y + +D K+ IA +K + S
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILD--S 497
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ N TY AL++ CK + A++ F KM +L N A+ L + G +
Sbjct: 498 GFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEA 557
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSY---SHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
L N+M + +SLD + Y + Y +L+D ++ + + + C Y+
Sbjct: 558 VQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC----YTC 613
Query: 256 LASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
S + + +A ++ + P DR Y+ LIS Y NL+ + ++
Sbjct: 614 FISGFCNLNMMPEAREVFSEMIGHGIAP-DRAVYNCLISKYQKLGNLEEAISLQDEMERV 672
Query: 314 FPPTNTS 320
P S
Sbjct: 673 LPSCTDS 679
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 5/260 (1%)
Query: 80 EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-- 137
E+ S K G L + R + D L N I A +F+ +
Sbjct: 209 EFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVR 268
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S + N T+ L+N YCKEL + A +L+ M E + + V ++ L R G+ E+
Sbjct: 269 SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEE 328
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
L + R + +D + + M +Y + D+ V+ M E TYS L
Sbjct: 329 GNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISP-NVVTYSILI 387
Query: 258 SIYVK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI-LKSTFP 315
+ + + E + + L++ Y LI +C + NL ++GI L+
Sbjct: 388 NGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHV 447
Query: 316 PTNTSYLVLLQALAKLNAID 335
P +L+ L++ +D
Sbjct: 448 PDVVVCSMLINGLSRQGMMD 467
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 8/235 (3%)
Query: 72 KTVRKDMLEYCVRSLRKFGRYRH---ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIA 128
K D + YC + F + R L++ + M+S + + V +++ + +
Sbjct: 549 KGFSPDHIIYCTL-IDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVE 607
Query: 129 AAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
+ + +Y + TY ++ YC + +A+ LFE + + N + F L
Sbjct: 608 NVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILI 667
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
Y + G+ + + + M +R + LTY + Y + + ++ +M +
Sbjct: 668 DAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGD-RV 726
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALK-KLEEMKPRDRKAYHFLISLYCNTSNL 300
+YS L K L E+A LA + + D AY LI YC L
Sbjct: 727 SPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRL 781
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 155/395 (39%), Gaps = 32/395 (8%)
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--------SEYAKNRYTYGALLNC 153
M SR HF D A+Y L A G+ A K + L + Y + TY L++
Sbjct: 1 MASR--HFRL-DAAIYNTLIA---GLCKARKPRHALELLHVMAANGYDASVVTYTTLIDG 54
Query: 154 YCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
CK + A AL +KM + N V + L + +P V +M + D
Sbjct: 55 LCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPD 114
Query: 214 NLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELAL 273
+TY + N +D V E+ E TY+ S KA +K L
Sbjct: 115 LVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDK---GL 171
Query: 274 KKLEEMK----PRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQAL 328
+ LEEM D + +IS C + +D +V+ G+L+ P + +Y ++L L
Sbjct: 172 EMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNL 231
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLA-DVIIRAYLQKDMYEEAALIFNNAKKRANASA 387
++ N +D +++ E + Y + +I A ++ E A+ + A +
Sbjct: 232 SRANRLDTVEEVLEHM-VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVME 290
Query: 388 RFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDG 447
+ + +F+ RS + LA N + + + +D + +VD
Sbjct: 291 VY--THNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK----SGNVDD 344
Query: 448 AEEFCKVLKSLNCL--DFSAYSLLIKTYIAAGKLA 480
A + + + C D ++ LI + AG+L+
Sbjct: 345 AWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLS 379
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 97/240 (40%), Gaps = 4/240 (1%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY ++ CK ++ L + E+MD + V F ++ + + + + + M
Sbjct: 153 TYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGM 212
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+R D+LTY + + + S N +D VE V M TY+ L ++A
Sbjct: 213 LERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKS-GHYALSATYAPLIHALIRAGD 271
Query: 266 FEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLV 323
E A A ++ +E + ++ I C + A N + G+++S P SY
Sbjct: 272 IESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNF 331
Query: 324 LLQALAKL-NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ L K N D K + +S C D+ + +I + + +A + K +
Sbjct: 332 VIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAK 391
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 5/260 (1%)
Query: 80 EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-- 137
E+ S K G L + R + D L N I A +F+ +
Sbjct: 209 EFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVR 268
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S + N T+ L+N YCKEL + A +L+ M E + + V ++ L R G+ E+
Sbjct: 269 SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEE 328
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
L + R + +D + + M +Y + D+ V+ M E TYS L
Sbjct: 329 GNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISP-NVVTYSILI 387
Query: 258 SIYVK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI-LKSTFP 315
+ + + E + + L++ Y LI +C + NL ++GI L+
Sbjct: 388 NGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHV 447
Query: 316 PTNTSYLVLLQALAKLNAID 335
P +L+ L++ +D
Sbjct: 448 PDVVVCSMLINGLSRQGMMD 467
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 8/235 (3%)
Query: 72 KTVRKDMLEYCVRSLRKFGRYRH---ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIA 128
K D + YC + F + R L++ + M+S + + V +++ + +
Sbjct: 549 KGFSPDHIIYCTL-IDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVE 607
Query: 129 AAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLS 186
+ + +Y + TY ++ YC + +A+ LFE + + N + F L
Sbjct: 608 NVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILI 667
Query: 187 TMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED 246
Y + G+ + + + M +R + LTY + Y + + ++ +M +
Sbjct: 668 DAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGD-RV 726
Query: 247 KCRWTTYSNLASIYVKAELFEKAELALK-KLEEMKPRDRKAYHFLISLYCNTSNL 300
+YS L K L E+A LA + + D AY LI YC L
Sbjct: 727 SPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRL 781
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/388 (19%), Positives = 155/388 (39%), Gaps = 34/388 (8%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYG 148
R+ HAL V+ +++ + ++ K + A K F+ L E + +TY
Sbjct: 314 RHLHALGVLPDVQT---------CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 364
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
+L++ +CK+ E+A L ++M N +N L + G ++ R L + M ++
Sbjct: 365 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 424
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
+ D++TY + Y ++ +F+EM ++ + Y+ L K EK
Sbjct: 425 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF-VYNALVHGCCKEGDMEK 483
Query: 269 AELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQA 327
A +++ + +++ LI YC + + ++++ ++ P + +Y ++
Sbjct: 484 AMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDW 543
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLA--DVIIRAYLQKDMYEEAALIFNNAKKRANA 385
K ++ F+E + R D A + ++ ++ D +I+ + K+
Sbjct: 544 HCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 603
Query: 386 SARFFKSRE--------------SFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVT 431
A FK R+ +I L R+ L E L E + +P
Sbjct: 604 EA--FKLRDEVVGKGMLTKGTIHDLLITALCKRE---DLTEASKLLDEMGELGLKPSLAA 658
Query: 432 VDTFFRFFEEEKDVDGAEEFCKVLKSLN 459
T R F E +D A + +KSL
Sbjct: 659 CSTLVRSFHEAGKMDEATRVFEGVKSLG 686
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 130/341 (38%), Gaps = 45/341 (13%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K G+ A + ++ R + F ++ +KT + A KYF+ + ++
Sbjct: 227 ISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 286
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N Y L+N + K AL++F + L L + + L+ G+ ++
Sbjct: 287 MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 346
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-----------NECEDK-C 248
+ +++K++ + D TY + + +++ + EMC N D C
Sbjct: 347 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 406
Query: 249 R----------------------WTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA 286
+ TYS + Y K+E AE A EM + +
Sbjct: 407 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE--NVAE-AFSLFHEMPSKGVQP 463
Query: 287 YHF----LISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCF 341
+ F L+ C +++ A+N +L+ F T S+ L+ K I Q F
Sbjct: 464 HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLF 522
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
+E ++ D +I + + EEA L+F ++R
Sbjct: 523 QEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 563
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
+ L KFG+ A E+++ M + + F + ++ + + + A + + + +
Sbjct: 87 IHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNL 146
Query: 141 AKNRYTYGALLN--CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ +YGA++N C+CK+L A L EKM N V ++ L Y G+ E+
Sbjct: 147 VPSAVSYGAMINGLCHCKDL--SLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEA 204
Query: 199 RPLVNQMKQRNISLDNLTY 217
R L++ M ++ D Y
Sbjct: 205 RRLLDGMSCSGVAPDIFCY 223
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 126/284 (44%), Gaps = 16/284 (5%)
Query: 58 GSVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G + GA + + M+ + ++ D + Y + L K R +A +++ M+ ++ + F
Sbjct: 385 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 444
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNR-----YTYGALLNCYCKELMTERALALFEK 169
+D +T + EK F LSE +N +YG+++N +CK A+A+ +
Sbjct: 445 NTLIDAYGRTGQL---EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 501
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M L N +N + Y+ G ++ LV +MK IS +TY + ++ + +
Sbjct: 502 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 561
Query: 230 IDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAY 287
I E + + N D + T +++ + + + +L + + + Y
Sbjct: 562 ISEAEEIINSLSNHRLIPDAVSYNTL--ISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 619
Query: 288 HFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAK 330
H LIS L + ++ ++++ P+N + ++++A +K
Sbjct: 620 HQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 663
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 121/304 (39%), Gaps = 13/304 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF-----NGL 137
+ L + GR +++ M S+KM +++ D ++ A F NG+
Sbjct: 273 LSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGV 332
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
+ YT LLN CK+ A + + + + V +N L Y + G+ E
Sbjct: 333 T---IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEG 389
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
QMK R+I D++TY + I + + EM + + T++ L
Sbjct: 390 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT-VETFNTLI 448
Query: 258 SIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTF 314
Y + EK + L +++E +KP + +Y +++ +C + +AV + +
Sbjct: 449 DAYGRTGQLEKCFIVLSEMQENGLKP-NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P Y ++ A + D E+ +S S + +++I+ + EA
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567
Query: 375 IFNN 378
I N+
Sbjct: 568 IINS 571
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 127/311 (40%), Gaps = 13/311 (4%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K ++ D + Y + K G + A + M + + + + +D K
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE 477
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A + + +SE N TY AL+N CK E+A+ L E+MD F +T+ +
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ Y ++G+ K L+ M + + +T+ V M + ++ ER+ M ++
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDK- 596
Query: 245 EDKCRWTTYSNLASIY-VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAV 303
TT+++L Y ++ + E+ + D Y+ LI +C N+
Sbjct: 597 GIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNM--- 653
Query: 304 NRVW----GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVI 359
W +++ F T SY L++ K + ++ FEE + + + D+
Sbjct: 654 KEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIF 713
Query: 360 IRAYLQKDMYE 370
+ ++ +E
Sbjct: 714 VDVNYEEGNWE 724
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 105/264 (39%), Gaps = 5/264 (1%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
L + G+ + A ++ ME R ++V +D + + K L N
Sbjct: 262 LCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPN 321
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
+YTY ++++ CK A + M + + V + L + + + G L +
Sbjct: 322 QYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFD 381
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+MK++ I D +TY + + ++F EM ++ K TY+ L Y KA
Sbjct: 382 EMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGL-KPDEVTYTALIDGYCKA 440
Query: 264 -ELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSY 321
E+ E L + +E+ + Y L+ C +D N + + + P +Y
Sbjct: 441 GEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTY 500
Query: 322 LVLLQALAKLNAIDILKQCFEEWE 345
L+ L K+ I+ + EE +
Sbjct: 501 NALINGLCKVGNIEQAVKLMEEMD 524
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 73/383 (19%), Positives = 156/383 (40%), Gaps = 33/383 (8%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTER----------A 163
F V+ + + + A K F+ L YG L++ L R A
Sbjct: 184 FDVFFQVLVEAGLLLEAGKLFDKL-------LNYGVLVSVDSCNLFLARLSNSFDGIRTA 236
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
+F + E+ NTV++N + + +LG+ ++ L+ QM+ R D ++Y V +
Sbjct: 237 FRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDG 296
Query: 224 YSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP-R 282
Y + + V ++ E+ + ++ TY+++ S K +AE L+ ++ +
Sbjct: 297 YCQVEQLGKVLKLMEELQRKGLKPNQY-TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNAIDILKQCF 341
D Y LIS + + N+ +++ +K P +Y ++ L + + ++ F
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415
Query: 342 EEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYL 401
E S+ D +I Y + +EA + N ++ + + +
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPN--VVTYTALVDGLC 473
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL 461
+ ++D+A NE+ +SE + +Q V T+ V E+ K+++ ++
Sbjct: 474 KCGEVDIA-NELLHEMSE------KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526
Query: 462 DF----SAYSLLIKTYIAAGKLA 480
F Y+ ++ Y G++A
Sbjct: 527 GFFPDTITYTTIMDAYCKMGEMA 549
>gi|297845850|ref|XP_002890806.1| hypothetical protein ARALYDRAFT_336036 [Arabidopsis lyrata subsp.
lyrata]
gi|297336648|gb|EFH67065.1| hypothetical protein ARALYDRAFT_336036 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 8 RLISTGSYLVRQLC----STPTETVSQRIAAPTPFPTGNEDKLYKRLSA----------- 52
R++++G +L ++ C + P + APT D KR
Sbjct: 5 RVMASGLHLWKRACPKAAALPLAGIKTSNTAPTAAAGVKVDDALKRAKVAYAKNQKRMMF 64
Query: 53 ---LGATGGSVTGALNAYIMEGKT---VRKDMLEYCVRSLRKFGRYRHALEVIEWMESRK 106
L V ++ Y E T V K L + K G+Y HAL + EWM+ +K
Sbjct: 65 EELLNMDKSRVKETIDQYKSEELTYVSVTKSDLHQWAKRFDKQGKYEHALAIFEWMDGKK 124
Query: 107 MHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
M F+ FA Y+ L A+T G+ AA +YF
Sbjct: 125 MSFTGNQFADYVALIAETKGMEAARRYF 152
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 8/260 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTY 147
GR AL V+E M K+ + L + +A ++F+ + A + TY
Sbjct: 343 GRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTY 402
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L+N C+ + A + ++M + + V + L Y + G+ + + N M Q
Sbjct: 403 TTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQ 462
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
R ++ + +TY D+ + +EM N+ + TY++L + KA +
Sbjct: 463 RGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLE-LNACTYNSLINGLCKAGYLD 521
Query: 268 KAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVL 324
+A + ++ +KP D Y LI C + LD A + + +L + PT +Y VL
Sbjct: 522 QAMRTMADMDAAGLKP-DVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVL 580
Query: 325 LQALAKLNAIDILKQCFEEW 344
+ ++ K+ EW
Sbjct: 581 MNGFCMSGRVEGGKKLL-EW 599
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 78/207 (37%), Gaps = 9/207 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TYG L++ YC E A+ L + M N + ++ + G+ +V M
Sbjct: 296 TYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDM 355
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ LD Y + + + D+ R F EM + TY+ L + +A
Sbjct: 356 VHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGL-ATDGVTYTTLINGLCRAGE 414
Query: 266 FEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTS 320
++AE K L+EM R D Y L+ YC + +V +++ P +
Sbjct: 415 LKEAE---KVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVT 471
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESR 347
Y L L K + + E ++
Sbjct: 472 YTALSDGLCKQGDVQAANELLHEMSNK 498
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY L++ CK +RA L ++M + V +N L + G+ E + L+
Sbjct: 540 YTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEW 599
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M ++NI + TY M+ Y N++ ++ MC+ + TY+ L + KA
Sbjct: 600 MLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEP-NENTYNILIKGHCKAR 658
Query: 265 LFEKAE 270
++A+
Sbjct: 659 SMKEAQ 664
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 99/255 (38%), Gaps = 12/255 (4%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
YC R G+ A +V M R + + + D K + AA + + +S
Sbjct: 444 YCKR-----GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498
Query: 141 AK--NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
N TY +L+N CK ++A+ MD + + L + G+ ++
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
L+ +M I +TY V M + ++G +++ M E TTY++L
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWML-EKNIHPNATTYNSLMK 617
Query: 259 IYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFP 315
Y + K + ++P + Y+ LI +C ++ +++ F
Sbjct: 618 QYCIGNNMKSTTEIYKGMCSRNVEP-NENTYNILIKGHCKARSMKEAQYFHNEMIEKGFR 676
Query: 316 PTNTSYLVLLQALAK 330
T +SY L++ L K
Sbjct: 677 LTASSYSALIRLLNK 691
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 20/249 (8%)
Query: 146 TYGALLNCYCKELMT-ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY +++ Y ++ + AL L E M E + + +N L + G+ E +++
Sbjct: 19 TYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDD 78
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MKQ +S + +TY ++ Y++ + ++F EM ++ E W TY+ L Y +
Sbjct: 79 MKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSW-TYNALIQGYGRKG 137
Query: 265 LFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNT 319
LF++ AL+ +EM +D Y+ I++Y L+ + R+ + + PP
Sbjct: 138 LFKE---ALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQV 194
Query: 320 SYLVLLQALAK----LNAIDILKQCFEE-WESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
+Y LL AK + A +IL++ E + +Y++ L+ ++ EA
Sbjct: 195 TYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSA-----RKEQSVAEATQ 249
Query: 375 IFNNAKKRA 383
+F N K +
Sbjct: 250 LFENLKSKG 258
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 123/301 (40%), Gaps = 11/301 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
V L GR A ++++ M+ K+ + + + A + K F + + +
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGE 119
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N +TY AL+ Y ++ + + AL L+++MD + + +N MY + G E +
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+++M + + D +TY + Y+ + + EM WT L+S
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSAR 239
Query: 261 VKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFP 315
+ + E +L E +K + + Y ++SLY ++W ++++
Sbjct: 240 KEQSVAEATQL----FENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCI 295
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P +Y L+++ CF++ D ++ ++ AY + EA L+
Sbjct: 296 PCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELL 355
Query: 376 F 376
+
Sbjct: 356 Y 356
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 140/337 (41%), Gaps = 19/337 (5%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKN 143
LR+ + HAL ++E M+ + ++ + + AAEK + + + + N
Sbjct: 28 LRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSAN 87
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY L+ Y + LF++M + N+ +N L Y R G ++ L +
Sbjct: 88 LVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYD 147
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+M + D TY + + Y ++ +ER+ EM + + TY+ L +Y K
Sbjct: 148 EMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQ-VTYNTLLDVYAKK 206
Query: 264 ELFEKAELALKKLEEMKPRDRK-AYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSY 321
F KA L+++ E R Y+ ++S ++ +++ LKS P +Y
Sbjct: 207 SYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTY 266
Query: 322 LVLLQALAKLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
+L + + ++E E+ C + + +I +Y MY+EA F + +
Sbjct: 267 SAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSG-LIESYGHHGMYQEALACFQDMR 325
Query: 381 KRA------------NASARFFKSRESFMIYYLRSRQ 405
K +A + + RE+ ++Y+ +++
Sbjct: 326 KSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKE 362
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 7/245 (2%)
Query: 57 GGSVTGAL---NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTD 113
GG + AL N I EG + L +G+ A+ V + ME + + T
Sbjct: 326 GGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETT 385
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMD 171
++ +D AK + A + +N + N Y +++ C+ M AL L E M
Sbjct: 386 YSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMA 445
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
NT+ FN G+ E ++NQM+Q + + TY + +
Sbjct: 446 NGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTR 505
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFL 290
++ E+ E E K TY+ + S + A +F+ A ++A K L D Y+ +
Sbjct: 506 EALQIVGEI-EEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTV 564
Query: 291 ISLYC 295
I YC
Sbjct: 565 IYAYC 569
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/419 (19%), Positives = 160/419 (38%), Gaps = 53/419 (12%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
SL K GR + A E+ ++M ++ +++ L A A F+ +++
Sbjct: 346 SLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVS 405
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N + L++ + K M + A+ +F +M N V ++ L + + R+G+
Sbjct: 406 NCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKF 465
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDI------------DGVER--------VFYEMCN 242
+QM I + Y + + D+ G+ R + + +C
Sbjct: 466 SQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCI 525
Query: 243 E---------------CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRK 285
E D+ T+++L Y EKA L + ++P D
Sbjct: 526 EGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP-DVV 584
Query: 286 AYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
+ L+S YC + + D + +L PT +Y ++L L + K+ F E
Sbjct: 585 TNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEM 644
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMI---YYL 401
++ D+ ++++ + D+ +EA +F+ K +F + + MI Y +
Sbjct: 645 IDSGTAVDIDTYKILLKGLCRNDLTDEAITLFH---KLGAMDCKFDITILNTMINALYKV 701
Query: 402 RSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC 460
R R+ N++ AA+S + P T R +E V+ A+ ++ C
Sbjct: 702 RRRE---EANDLFAAISTSG---LVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGC 754
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 115/283 (40%), Gaps = 8/283 (2%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG-IAAAEKYFNGLSEYAKNR---Y 145
G A E I M S+ +H F + + G + A+ FN L + +R
Sbjct: 491 GDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFN-LVIHIGDRPTIV 549
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ +L++ YC E+A + + M + + V N L + Y + G+ + L +M
Sbjct: 550 TFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREM 609
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + +TY + + +++F+EM + TY L + +L
Sbjct: 610 LHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDS-GTAVDIDTYKILLKGLCRNDL 668
Query: 266 FEKAELALKKLEEMKPR-DRKAYHFLI-SLYCNTSNLDAVNRVWGILKSTFPPTNTSYLV 323
++A KL M + D + +I +LY +A + I S P ++Y V
Sbjct: 669 TDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGV 728
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
+++ L K +++ F E + RL + IIR LQK
Sbjct: 729 MIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQK 771
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 101/242 (41%), Gaps = 5/242 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKM--DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
+Y ++ C + ++ AL + ++M + + + V+FN + + + G+ K L N
Sbjct: 197 SYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFN 256
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+M Q+ + D TY + + +D E V +M ++ + TY+ + Y +
Sbjct: 257 EMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEP-DGVTYNAIIHGYSCS 315
Query: 264 ELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSY 321
++++ +K+ + + P F+ SL + + DA + P SY
Sbjct: 316 GHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSY 375
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
+LL A + F + + +++I A+ ++ M +EA L+F +
Sbjct: 376 SILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQG 435
Query: 382 RA 383
+
Sbjct: 436 QG 437
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 45/272 (16%), Positives = 101/272 (37%), Gaps = 25/272 (9%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY A+++ Y + + +F KM + +TV F++ + + G+ + + M
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYM 363
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAE 264
+ D ++Y + + Y+ + +F+ M ++ C L S + K
Sbjct: 364 TTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINI--LISAHAKRG 421
Query: 265 LFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYL 322
+ ++A L +++ R + Y LIS +C L DA+ + ++ P Y
Sbjct: 422 MMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYH 481
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
L+ C D+ A I + K ++ + F++
Sbjct: 482 SLIHGF-------------------CMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHS 522
Query: 383 ANASARFFKSRESF-MIYYLRSRQLDLALNEM 413
R +++ F ++ ++ R + N +
Sbjct: 523 LCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSL 554
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGL---SEYAKNRYTYGALLNCYCKELMTERALALFEKM 170
F+ L++ A TN K F+G S + ALL Y K+ E A +F++
Sbjct: 101 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 160
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
E + V++N++ + Y + GQ K + +MK+R + +D +T+I + +H +
Sbjct: 161 RE----KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLV 216
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA--------------------- 269
+ E+ F M +C+ S + +Y +A EKA
Sbjct: 217 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILA 276
Query: 270 -----------ELALKKLEEMKPRDRKAYHFLISLYCNTSN 299
LA +K+ MKP D AY L ++Y + +
Sbjct: 277 ACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 317
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 5/251 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+RS+ GR+ A + + M + S F + ++ + I A + ++
Sbjct: 324 LRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGC 383
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N +Y LL+ CK+ ERA+ + M + V +N L T + G+ +
Sbjct: 384 TPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 443
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
++NQ+ + S +TY + S + D ++ EM + K TYS L
Sbjct: 444 ILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGK-GLKPDIITYSTLVGGL 502
Query: 261 VKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
+ ++A LEEM KP ++ L + A++ + ++ PT
Sbjct: 503 SREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTE 562
Query: 319 TSYLVLLQALA 329
TSY++L++ LA
Sbjct: 563 TSYMILIEGLA 573
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/428 (19%), Positives = 169/428 (39%), Gaps = 32/428 (7%)
Query: 1 MMIRNQSRLISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDKL-YKRLSALGATGGS 59
M+ R I + L+R LC T + R+ D + Y L + G
Sbjct: 136 MVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGE 195
Query: 60 VTGALNAYIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVY 117
+ AL +++ +V D++ Y +R+L G+ + A+EV++ R+ + + +
Sbjct: 196 IGSALQ--LLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTIL 253
Query: 118 LDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
++ T K +G+ A K + + + + TY L+N CKE + A+ M
Sbjct: 254 IEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGC 313
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN----DID 231
N + N + G+ + +M ++ S +T+ + + ID
Sbjct: 314 QPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAID 373
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAY 287
+E++ C +Y+ L K +K E A++ L+ M R D Y
Sbjct: 374 VLEKMPQHGCTP-----NSLSYNPLLHALCKD---KKMERAIEYLDIMVSRGCYPDIVTY 425
Query: 288 HFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
+ L++ C +D + L S P +Y ++ L+K+ D + +E +
Sbjct: 426 NTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKG 485
Query: 347 RCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK---RANASARFFKSRESFMIYYLRS 403
+ D+ ++ ++ +EA F++ ++ + NA + S M+ ++
Sbjct: 486 KGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAI-----TYNSIMLGLCKA 540
Query: 404 RQLDLALN 411
RQ A++
Sbjct: 541 RQTVRAID 548
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 134/302 (44%), Gaps = 7/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + AL ++ ME ++ ++ ++L+ K + A F+ L S + +
Sbjct: 11 KEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGFTPDLV 70
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y A++N + K + A +L +M + NT +++ L TMY+ + + + ++M
Sbjct: 71 AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEM 130
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ LD T + + Y L +++F+ M + + +Y+ L +Y AEL
Sbjct: 131 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM-RKMGIEPNVVSYNTLLRVYGDAEL 189
Query: 266 FEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYL 322
F +A + L +L + K ++ Y+ +I +Y T + N + ++S P + +Y
Sbjct: 190 FGEA-IHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 248
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ K+ +D F++ S D L +I AY + + A + + K+
Sbjct: 249 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP 308
Query: 383 AN 384
N
Sbjct: 309 DN 310
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L+ + KE + + AL+ +KM++ + G+ V ++NL + +L K + +++
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYSNLASI 259
K + D + +Y+ + ++ G ++F E + +E + T+YS L ++
Sbjct: 61 KSSGFTPD-------LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTM 113
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKSTFPPT 317
YV+ + F +A ++ E+K D + +I +Y +++ WG+ K P
Sbjct: 114 YVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 173
Query: 318 NTSYLVLLQA 327
SY LL+
Sbjct: 174 VVSYNTLLRV 183
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 91/207 (43%), Gaps = 9/207 (4%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+N TY +++ Y K L E+A L ++M N++ ++ + +++ ++G+ ++ L
Sbjct: 207 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 266
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+++ + +D + + + +Y + +R+ +E+ ++ R T LA
Sbjct: 267 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHEL-KRPDNIPRDTAIHILAG--- 322
Query: 262 KAELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST--FPPTN 318
A E+A ++ ++ + +D + +I L V V+ ++ FP +N
Sbjct: 323 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSN 381
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWE 345
V+L A KL D + E +
Sbjct: 382 V-IAVVLNAYGKLQEFDKANDVYMEMQ 407
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 4/215 (1%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-SEYAKNRYTYG 148
G+ A+ M + F LD+ K+ + A L S + + TY
Sbjct: 153 GKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVTYN 212
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
L N YC T AL + ++M + V +N + Y R Q ++ +MK+R
Sbjct: 213 ILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKR 272
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEK 268
+D +TY + + D+ +RVF+EM E TY+ L + K + E
Sbjct: 273 KCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVP-NVATYNALIQVLCKKDSVEN 331
Query: 269 AELALKKL--EEMKPRDRKAYHFLISLYCNTSNLD 301
A + +++ E + + Y+ +I C+ +++
Sbjct: 332 AVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDME 366
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 124/321 (38%), Gaps = 54/321 (16%)
Query: 26 ETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIM----EGKTVRKD--ML 79
E V QR+ P PT + Y+ + + G + + + TV+ D M
Sbjct: 209 EAVFQRLLTTGPSPTA---QTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMY 265
Query: 80 EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-- 137
+ + K G+ A+ V + M+ ++ + F L A AE F L
Sbjct: 266 NLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFN---SLLACQKTWKDAEDVFRKLQA 322
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
++ + ++Y AL+N Y K E A A F+ M VA+N L Y + PE
Sbjct: 323 AKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEG 382
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
R ++ QMKQ N C +Y++L
Sbjct: 383 ARAVLKQMKQ----------------------------------NGCTPTVE--SYTSLI 406
Query: 258 SIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STF 314
S YV L KAE + +++E ++P + + + L++ Y N + LD + R + +K +
Sbjct: 407 SAYVSVNLMAKAEQTVLRMKEADLQP-NLQTFCILMTGYANGNKLDNMMRSFETMKLAGL 465
Query: 315 PPTNTSYLVLLQALAKLNAID 335
P Y VL+ A + D
Sbjct: 466 EPNRHVYTVLVNAYGSNDDFD 486
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 9/209 (4%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y N+ Y +L YCK+ ++ +F++M EL N + Y R +K
Sbjct: 150 YNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAE 209
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT--YSNLA 257
+ ++ S TY M+SYS +D V+R+F + + + Y+ +
Sbjct: 210 AVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMI 269
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLI---SLYCNTSNLDAVNRVWGILKSTF 314
Y K K E A+ + MK R+R A + L C + DA + + +
Sbjct: 270 HTYGKQ---GKVEQAMSVYQSMK-RERVALTIVTFNSLLACQKTWKDAEDVFRKLQAAKL 325
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEE 343
P SY L+ A AK + F++
Sbjct: 326 DPDVFSYTALVNAYAKARRAECAHAAFDD 354
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 110/283 (38%), Gaps = 18/283 (6%)
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M+Q + + Y + + +Y +D E +F M E Y+ Y +
Sbjct: 145 MEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMA-ELGVAANIEMYTLQIEGYGRRR 203
Query: 265 LFEKAELALKKLEEMKPRDR-KAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS--- 320
F+KAE ++L P + Y ++ Y LD V R++ ++ + PT
Sbjct: 204 SFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDAR 263
Query: 321 -YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ-KDMYEEAALIFNN 378
Y +++ K ++ ++ + + L V + L + +++A +F
Sbjct: 264 MYNLMIHTYGKQGKVEQAMSVYQSMKRE----RVALTIVTFNSLLACQKTWKDAEDVFRK 319
Query: 379 AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRF 438
+ A F S + + Y ++R+ + A AA + RP QV +
Sbjct: 320 LQA-AKLDPDVF-SYTALVNAYAKARRAECA----HAAFDDMIAAGIRPTQVAYNALINA 373
Query: 439 FEEEKDVDGAEEFCKVLKSLNCLD-FSAYSLLIKTYIAAGKLA 480
+ + KD +GA K +K C +Y+ LI Y++ +A
Sbjct: 374 YAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMA 416
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 116/285 (40%), Gaps = 44/285 (15%)
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
++N +CK+ + A +KM+ L N V +++L Y+ LG E + ++ M ++
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC-------------EDKCRWTTYSN- 255
+S + +TY + ++ Y +D E+V M E + CR +
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351
Query: 256 ---------------------LASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLIS 292
L + Y K +AE + ++ + +KP D +Y+ L+
Sbjct: 352 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP-DSYSYNTLLD 410
Query: 293 LYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSY 351
YC + +A N +L+ PT +Y LL+ L ++ A D Q + R +
Sbjct: 411 GYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 470
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESF 396
D ++ + + +E A+ ++ + R F KSR +F
Sbjct: 471 DEVGYSTLLDGLFKMENFEGASTLWKDILARG-----FTKSRITF 510
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 142/375 (37%), Gaps = 38/375 (10%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y+Y LL+ YC+E T A L +KM + + +N L R+G + +
Sbjct: 401 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 460
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ M +R ++ D + Y + + + +G ++ ++ K R T + ++ +
Sbjct: 461 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSY 321
++ E E+ K + D Y LI YC SN+ +V G + + P+ Y
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMY 580
Query: 322 LVLLQALAK----LNAIDILKQ---------------CFEEW------ESRCSSY----- 351
L+ L K + D+L + + W + SSY
Sbjct: 581 NSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 640
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALN 411
+ A++II + + +Y + N + FF E F L+S A+
Sbjct: 641 NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF----LKSDIRYAAIQ 696
Query: 412 EMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL--DFSAYSLL 469
++ +L E+ + P + + + VD A F +L SL D Y L
Sbjct: 697 KIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML-SLKGFVPDNFTYCTL 755
Query: 470 IKTYIAAGKLASDMR 484
I Y AAG + R
Sbjct: 756 IHGYSAAGNVDEAFR 770
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY AL+N CK +RA LF K+ + N V +N L Y ++G + L
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 842
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++M + IS +TY + DI+ ++ +M D + Y L Y++
Sbjct: 843 DKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS-KLIEYCTLVQGYIR 901
Query: 263 AELFEK 268
+ +K
Sbjct: 902 SGEMQK 907
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 125/310 (40%), Gaps = 20/310 (6%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME V +++ Y + G A V+++M + + + + + + K
Sbjct: 252 MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCK 311
Query: 127 IAAAEKYFNGLSEYA---KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
+ AEK G+ E A + YG L++ YC+ + A+ L ++M L N N
Sbjct: 312 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 371
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+L Y + G+ + ++ +M N+ D+ +Y + Y +G + +C++
Sbjct: 372 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR----EGHTSEAFNLCDK 427
Query: 244 -CEDKCRWT--TYSNLASIYVKAELFEKA----ELALKKLEEMKPRDRKAYHFLISLYCN 296
++ T TY+ L + F+ A L +K+ + P D Y L+
Sbjct: 428 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR--GVAP-DEVGYSTLLDGLFK 484
Query: 297 TSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
N + + +W IL F + ++ ++ L K+ + ++ F++ + S D
Sbjct: 485 MENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGIT 544
Query: 356 ADVIIRAYLQ 365
+I Y +
Sbjct: 545 YRTLIDGYCK 554
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 7/207 (3%)
Query: 105 RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMTER 162
R+ FS T F + L + + A F+ + + + + + +LLN K T
Sbjct: 150 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 209
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A ++++M + + + + + + + G+ ++ V +M+ + + +TY +
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE---M 279
Y L D++ + V M + + TY+ L Y K ++AE L+ ++E +
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSR-NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 328
Query: 280 KPRDRKAYHFLISLYCNTSNLDAVNRV 306
P D +AY LI YC T +D R+
Sbjct: 329 VP-DERAYGVLIDGYCRTGKIDDAVRL 354
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 5/164 (3%)
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
L N + +N + G+ + R + + + DN TY + YS ++D
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLIS 292
R+ EM TY+ L + K+E ++A+ KL + + P + Y+ LI
Sbjct: 770 RLRDEMLRRGLVP-NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP-NVVTYNTLID 827
Query: 293 LYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAID 335
YC N+DA ++ +++ P+ +Y L+ L K I+
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 4/172 (2%)
Query: 77 DMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
D YC + G A + + M R + + + ++ K+ + A++ F
Sbjct: 748 DNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF 807
Query: 135 NGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
+ L + N TY L++ YCK + A L +KM E + V ++ L +
Sbjct: 808 HKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKH 867
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
G E+ L+NQM + + + Y +Q Y ++ + +++ M C
Sbjct: 868 GDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRC 919
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 92/221 (41%), Gaps = 20/221 (9%)
Query: 136 GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
G+ N TYGAL++ +CKE M ++A + + +M E N + + + + RLG+
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR-WTTYS 254
++ L+ +M D+ ++ Y+ + I + ++ C+ + +
Sbjct: 664 DEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKI----------ADSLDESCKTFLLPN 713
Query: 255 NLASIYVKAELFEKAEL-------ALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
N+ A L + ++ ++ L+ P D Y LI Y N+D R+
Sbjct: 714 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP-DNFTYCTLIHGYSAAGNVDEAFRLR 772
Query: 308 G-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
+L+ P +Y L+ L K +D ++ F + +
Sbjct: 773 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 127/317 (40%), Gaps = 15/317 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
++ + + G+ + ALE++E M + +D +TN ++ + L
Sbjct: 256 IKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGV 315
Query: 142 --KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
N T+ ++++ YCK E A+A++ M + NTV +N L Y ++G
Sbjct: 316 CMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAV 375
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+ QM + D +T+ + Y +D R++ +M + + + Y+ SI
Sbjct: 376 EVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDM---AQHRIQPNVYT--FSI 430
Query: 260 YVKAELFE-KAELALKKLEEMKPRDRKA-----YHFLISLYCNTSNLDAVNRVW-GILKS 312
+ + + +++ A++ L E+ R A Y+ +I + C +D N + G+ +
Sbjct: 431 IIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 490
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
P +Y +L+ + I F E S D + I L+ M E
Sbjct: 491 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 550
Query: 373 ALIFNNAKKRANASARF 389
+ A A++ F
Sbjct: 551 DHVMRLASGGASSIQEF 567
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 128/315 (40%), Gaps = 14/315 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT----NGIAAAEKYFNGLSEYA 141
L + GR AL++ + M + H+ Y+ A +L + N + A+ + SE+
Sbjct: 152 LCRSGRQADALQLFDQMTT---HYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFG 208
Query: 142 --KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV-AFNNLSTMYLRLGQPEKV 198
Y Y L++ +ALFE+ + + V +FN + R+GQ +K
Sbjct: 209 CRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKA 268
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
LV +M + S D +T+ + + N++ V + + T++++ S
Sbjct: 269 LELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVIS 328
Query: 259 IYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFP 315
Y KA E A + + P + Y+ LI+ Y +L + V+ + + P
Sbjct: 329 GYCKAGKLEDAMAVYNDMVASGIMP-NTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCP 387
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P ++ L+ + +D + + + ++ +II + +++ +EA +
Sbjct: 388 PDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRL 447
Query: 376 FNNAKKRANASARFF 390
N R + + + F
Sbjct: 448 LNELNLRPDIAPQAF 462
>gi|356526577|ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 878
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 136/321 (42%), Gaps = 17/321 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+R+L + + AL++ E +R + F+ + + N + A + ++
Sbjct: 197 IRTLGRLKKIELALDLFEESRTRGYGNTVYSFSAMISALGRNNRFSEAVSLLRSMGKFGL 256
Query: 142 -KNRYTYGALLNCYCK-ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
N TY A+++ K EL E + E+M + + + +N+L + G+ + R
Sbjct: 257 EPNLVTYNAIIDAGAKGELTFEIVVKFLEEMIAAGCMPDRLTYNSLLKTCVAKGRWKLCR 316
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW---TTYSNL 256
L+ +M+ + I D TY ++ + +D + + E K W TYS L
Sbjct: 317 DLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLAR---HAIDVEMPAKNIWPNVVTYSTL 373
Query: 257 ASIYVKAELFEKAELALKKLEEMKP----RDRKAYHFLISLYCNTSNL-DAVNRVWGILK 311
+ Y KAE FE AL +EMK DR +Y+ L+ LY N +AV + +
Sbjct: 374 MAGYSKAERFED---ALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMEC 430
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
+Y L++ + N +++ F+E ++R + +I+ Y + MY E
Sbjct: 431 CGIKNDVVTYNALIEGYGRHNKYVEVQKLFDEMKARRIYPNDLTYSTLIKIYTKGRMYAE 490
Query: 372 AALIFNNAKKRANASARFFKS 392
A ++ K+ + F S
Sbjct: 491 AMDVYRELKQEGMKTDVVFYS 511
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 21/255 (8%)
Query: 66 AYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTN 125
A M + +L+ CV GR++ +++ ME + + + Y+D K
Sbjct: 290 AGCMPDRLTYNSLLKTCVAK----GRWKLCRDLLAEMEWKGIGRDVYTYNTYVDALCKGG 345
Query: 126 GIAAAEKYFNGLSEYAKNRY----TYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ A + + AKN + TY L+ Y K E AL ++++M L + V+
Sbjct: 346 RMDLARHAID-VEMPAKNIWPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLLIRLDRVS 404
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
+N L +Y LG E+ +M+ I D +TY ++ Y N V+++F EM
Sbjct: 405 YNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVQKLFDEM- 463
Query: 242 NECEDKCRWT-----TYSNLASIYVKAELFEKAELALKKL-EEMKPRDRKAYHFLISLYC 295
K R TYS L IY K ++ +A ++L +E D Y LI C
Sbjct: 464 -----KARRIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDALC 518
Query: 296 NTSNLDAVNRVWGIL 310
+++ R+ ++
Sbjct: 519 KNGLIESSLRLLDVM 533
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 30/264 (11%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY +LLN CK E + ++ M E N FN L R + +K L+ +
Sbjct: 497 YTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEE 556
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK ++++ D +T+ + + D+DG +F +M C TY+ + + +
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKL 616
Query: 265 LFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNT 319
AE K +EM R D Y ++ +C T N+D + ++++ F P+ T
Sbjct: 617 NVTMAE---KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLT 673
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA-LIFNN 378
+ ++ L C E+ + II +QK + EA IF++
Sbjct: 674 TLGRVINCL-----------CVEDRVYEAAG--------IIHRMVQKGLVPEAVNTIFDH 714
Query: 379 AKKRANASARFFKS--RESFMIYY 400
KK A + ++S + YY
Sbjct: 715 DKKEVAAPKLVLEDLLKKSCITYY 738
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 102/291 (35%), Gaps = 75/291 (25%)
Query: 134 FNGLSEYAKNRYTYGALLNCYCKELMTERALALF-------------------------- 167
FNG + + +TY +L++ C E T RALALF
Sbjct: 349 FNG---FVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 168 ---------EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYI 218
+M E + FN L ++G LV M + D T+
Sbjct: 406 LILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 219 VWMQSYS---------HLNDI---DGVERVFYEMCNECEDKCRWTTYSNLASIY------ 260
+ + YS + D+ +GV+ Y + C+ + Y ++ Y
Sbjct: 466 ILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEK 525
Query: 261 -VKAELF------------EKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAV 303
LF K + AL LEEMK + D + LI +C +LD
Sbjct: 526 GCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 304 NRVWGILKSTF--PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
++ ++ + + +Y +++ A + + + ++ F+E RC D
Sbjct: 586 YTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
>gi|224101979|ref|XP_002312498.1| predicted protein [Populus trichocarpa]
gi|222852318|gb|EEE89865.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 110/238 (46%), Gaps = 15/238 (6%)
Query: 90 GRYRHALEVIEWME-SRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYT 146
G+ +E+++ M+ + K+ S F ++ +K G AA K + L + T
Sbjct: 152 GQMEKTVEIVKEMKGTAKLKVSDCIFCAVVNGFSKRRGFDAAVKVYEELKYDGCEPGQVT 211
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +++N YC+ + +A +F +M+ F VA++++ +MY + G+P LV +MK
Sbjct: 212 YASVINAYCRVGLYSKAEVVFFEMEAKGFDKCVVAYSSIISMYGKTGRPRDAMRLVAKMK 271
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAE 264
+ + Y + + D+ VE+++ EM DK TY+++ S Y K++
Sbjct: 272 LKGCQPNTWIYNSLVDMHGRAKDLRRVEKLWKEMKRRKVAPDK---VTYTSIISAYSKSK 328
Query: 265 LFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
+ E+ ++ E + D ++ ++ S +D + ++ +KS P +
Sbjct: 329 EY---EMCVRFFHEYRINGGVIDGAIAGIMVGVFSKISRIDELLKLLRDMKSEGAPID 383
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 129/306 (42%), Gaps = 14/306 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMH----FSYTDFAVYLDLTAKTNGIAAAEKYFNGLS 138
+++ K G +E+ ESRK+ + + + ++ + A +YF +
Sbjct: 36 MKARHKLGDAERVVEMFNEFESRKIDSKPMILSQMYKILCESLGRSGQVFEALEYFRDMK 95
Query: 139 EYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+ ++ Y +L+ + A L+++ E + L + F L +Y+ GQ E
Sbjct: 96 KKGILEDSSMYSSLICSLVNIREVKLAEELYKEAQEKRMLKDPETFLKLVLIYMEEGQME 155
Query: 197 KVRPLVNQMKQR-NISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYS 254
K +V +MK + + + + + +S D +V+ E+ + CE TY+
Sbjct: 156 KTVEIVKEMKGTAKLKVSDCIFCAVVNGFSKRRGFDAAVKVYEELKYDGCEPG--QVTYA 213
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPRDR--KAYHFLISLYCNTSN-LDAVNRVWGILK 311
++ + Y + L+ KAE+ ++E K D+ AY +IS+Y T DA+ V +
Sbjct: 214 SVINAYCRVGLYSKAEVVFFEMEA-KGFDKCVVAYSSIISMYGKTGRPRDAMRLVAKMKL 272
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
P Y L+ + + +++ ++E + R + D II AY + YE
Sbjct: 273 KGCQPNTWIYNSLVDMHGRAKDLRRVEKLWKEMKRRKVAPDKVTYTSIISAYSKSKEYEM 332
Query: 372 AALIFN 377
F+
Sbjct: 333 CVRFFH 338
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 12/246 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLG---NTVAFNNLSTMYLRLGQPEKVRPLV 202
+Y LL +C E E AL L M + + N V++ + + GQ +K L
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLF 226
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+M R I + +TY + +D E VF +M ++ K TY+ L Y+
Sbjct: 227 LEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV-KPDNDTYNCLIHGYLS 285
Query: 263 AELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVW-GILKSTFPPT 317
K + ++ LEEM K Y L++ CN + +++ P
Sbjct: 286 ---IGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPN 342
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
Y +L+ A A+ + S D + ++I AY +K M +EA IFN
Sbjct: 343 VAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFN 402
Query: 378 NAKKRA 383
K++
Sbjct: 403 KMKQQG 408
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 10/213 (4%)
Query: 135 NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
NGLS + + + + Y K+ M + A+ +F KM + + V F L +LG+
Sbjct: 372 NGLS---PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC--EDKCRWTT 252
+ NQM ++ + + + ++ + + ++EM N+ D + T
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 253 YSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILK 311
L ++ K ++ KA+ + +E + R D +Y LI +C +D + ++
Sbjct: 489 I--LCNLCTKGQVM-KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVML 545
Query: 312 ST-FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
S P +Y LL + ID F E
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFRE 578
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 3/195 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ CK + +RA +F++M + + +N L YL +G+ ++V ++
Sbjct: 237 NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRML 296
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY-V 261
+M + D TY + +Y N R F++ K Y L Y
Sbjct: 297 EEMSAHGLKPDCYTYGSLL-NYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYAT 355
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTS 320
K L E +L +E D ++ + + Y + +D ++ +K P +
Sbjct: 356 KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415
Query: 321 YLVLLQALAKLNAID 335
+ L+ AL KL +D
Sbjct: 416 FGALIDALCKLGRVD 430
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 38/270 (14%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY L+N + E A +FE MD K + +TV +N + Y + G+ +K
Sbjct: 221 YTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD 280
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM------------------------ 240
M+ +N+ D +TY+ +Q+ D D ++ EM
Sbjct: 281 MEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRK 340
Query: 241 CNEC--------EDKCRWTT--YSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYH 288
C E + CR Y+ L Y K E+A +++ E +P D Y
Sbjct: 341 CMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEP-DAVTYS 399
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDILKQCFEEWESR 347
L++ C + LD ++ ++ N Y L+ L K I+ + FEE +
Sbjct: 400 VLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEK 459
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ D + II A + ++A +F
Sbjct: 460 GCARDSYCYNAIIDALAKHGKIDQALALFG 489
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 106/269 (39%), Gaps = 13/269 (4%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME K V+ D + Y +++ + L + ME R + +++ + K
Sbjct: 281 MEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRK 340
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
A F +++ N Y AL++ Y K E A+ LFE+M F + V ++
Sbjct: 341 CMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSV 400
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + G+ + L + + + ++++ + Y + I+ E +F EM
Sbjct: 401 LVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEM---S 457
Query: 245 EDKCRWTTYSNLASI--YVKAELFEKAELALKKLEEMKPRDRKAYHFLI---SLYCNTSN 299
E C +Y A I K ++A ++EE + D+ Y F I L+ N
Sbjct: 458 EKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEE-EGCDQTVYTFTILIDGLFKEHKN 516
Query: 300 LDAVNRVWGILKSTFPPTNTSYLVLLQAL 328
+A+ ++ PT S+ L L
Sbjct: 517 EEAIKFWDKMIDKGITPTVASFRALAIGL 545
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 9/290 (3%)
Query: 94 HALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALL 151
H L ++ M +H ++ F++ + AK + A F+ + + N TYGA++
Sbjct: 248 HGL--LDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVI 305
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNIS 211
CK E A+ FE+M + + +N+L + E+ L+ +M R I
Sbjct: 306 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 365
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAEL 271
L+ + + + S+ + E++F ++ K TYS L Y A ++A
Sbjct: 366 LNTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 424
Query: 272 ALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQAL 328
L + MKP D Y LI+ YC S + DA+ + S P +Y ++LQ L
Sbjct: 425 LLASMVSVGMKP-DCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+ K+ + ++ ++I+ + + ++A +F N
Sbjct: 484 FQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQN 533
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 9/245 (3%)
Query: 145 YTYGALLNCYCKELMTERALALFEKM--DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
++Y LLN C E ++ AL L M D + V+++ + + + G +K
Sbjct: 52 FSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTY 111
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYV 261
N+M + IS + +TY + + +D V M C TY+++ +
Sbjct: 112 NEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDC--MTYNSIVHGFC 169
Query: 262 KAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTN 318
+ ++A + LKK+ + ++P D Y+ L+ C +++ + K P
Sbjct: 170 SSGQPKEAIVFLKKMRSDGVEP-DVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEI 228
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
T+Y LLQ A A+ + + + + +++ AY +++ EEA L+F+
Sbjct: 229 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 288
Query: 379 AKKRA 383
+++
Sbjct: 289 MRQQG 293
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 5/190 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY ++++ +C + A+ +KM + V +N+L + G+ + R + + M
Sbjct: 160 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 219
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+R + + TY +Q Y+ + + + M + +S L Y K E
Sbjct: 220 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY-VFSILVCAYAKQEK 278
Query: 266 FEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYL 322
E+A L K+ + + P + Y +I + C + + DA+ ++ P N Y
Sbjct: 279 VEEAMLVFSKMRQQGLNP-NAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337
Query: 323 VLLQALAKLN 332
L+ L N
Sbjct: 338 SLIHGLCTCN 347
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 51/288 (17%), Positives = 112/288 (38%), Gaps = 5/288 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L ++ A E+I M R + + F +D K + +EK F+ +
Sbjct: 340 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 399
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY L++ YC + A L M + + V ++ L Y ++ + +
Sbjct: 400 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALV 459
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +M+ +S D +TY + +Q + ++ + + + +TY+ +
Sbjct: 460 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI-TKSGRQLELSTYNIILHGL 518
Query: 261 VKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTN 318
K +L + A + L M + + + ++ +I D ++ S P
Sbjct: 519 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 578
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
+Y ++ + + ++ L Q F E + D + + I+R LQ+
Sbjct: 579 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 626
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR--Y 145
K R + AL + MES + + + L +T AAA++ + G+++ +
Sbjct: 450 KISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELS 509
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+ CK +T+ AL +F+ + + FN + L++G+ ++ + L
Sbjct: 510 TYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 569
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + TY + ++ ++ ++++F M ED T S + + V+ EL
Sbjct: 570 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM----EDN-GCTVDSGMLNFIVR-EL 623
Query: 266 FEKAELA 272
++ E+
Sbjct: 624 LQRGEIT 630
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 20/224 (8%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-- 140
+ SL K GR A + M R + F +D K AE+ F + +
Sbjct: 52 INSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNL 111
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N TY ALL+ YCK E A + +KM++ N + F+++ Y + G K
Sbjct: 112 APNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVD 171
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
++ +M QRN+ + + Y + + Y + D V + C E K R SN+
Sbjct: 172 VLREMVQRNVMPNTIVYAILIDGYFKAGEQD----VADDFCKEM--KSRRLEESNV---- 221
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVN 304
+F+ LK++ M +A +I +Y + D VN
Sbjct: 222 ----IFDILLNNLKRVGRMD----EARSLIIDMYSKGIDPDIVN 257
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 33/293 (11%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRY--------------------RHALEVIEWMESRK 106
M+ K +R D++ Y ++ L + G+Y AL+++ M+S
Sbjct: 281 MKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYG 340
Query: 107 MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERAL 164
+ + + + + KT + AE + + E+ T+ L+ Y + ++ L
Sbjct: 341 IMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKIL 400
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ EK+ + +N L T++ RLG K + ++++M +R IS D +TY ++ Y
Sbjct: 401 QIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGY 460
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL-EEMKPR- 282
+ ++ + + +M + TTY+ L A L E+ +KL EM R
Sbjct: 461 CTGSHVEKALKTYSQMFVDGIAP-NITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERG 519
Query: 283 ---DRKAYHFLISLYCNTSNLD--AVNRVWGILKSTFPPTNTSYLVLLQALAK 330
+ Y L+S Y N + + I K F PT +Y VL+ AK
Sbjct: 520 LVPNAATYDILVSGYGRVGNRKKTIILHIEMITKG-FVPTLKTYNVLISDYAK 571
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 121/292 (41%), Gaps = 43/292 (14%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
L K G+ + A EV E + + + ++ LD K + AE + +
Sbjct: 89 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 148
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N T+ +++N Y K+ M +A+ + +M + + NT+ + L Y + G+ +
Sbjct: 149 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 208
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK R + N+ + + + + + +D + +M ++ D Y++L Y K
Sbjct: 209 KEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDP-DIVNYASLIDGYFK 267
Query: 263 AELFEKAEL-ALKKLEEMKPR----DRKAYHFLI-----------------------SLY 294
E +L AL ++EMK + D AY+ LI +
Sbjct: 268 ----EGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPD 323
Query: 295 CNTSN-LDAVNRV--WGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
C T + LD +N + +GI+ P +Y +L+ L K A++ + +E
Sbjct: 324 CKTEDALDILNEMKSYGIM-----PNAVTYNILIGGLCKTGAVEKAESALDE 370
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 166/425 (39%), Gaps = 28/425 (6%)
Query: 68 IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI 127
+ EG + +++L K + R A+ ++E M + + F + G
Sbjct: 150 VNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLM------QGF 203
Query: 128 AAAEKYFNGLSEYAKNRYTYGALL---------NCYCKELMTERALALFEKMDELKFLGN 178
E NG + K YG LL N +CKE E AL ++ E F +
Sbjct: 204 IE-EGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPD 262
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFY 238
V FN+L + R+G +V+ M ++ D TY + L + + +
Sbjct: 263 QVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQ 322
Query: 239 EMC-NECEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCN 296
+M EC TY+ L S K E A +LA + + D ++ LI C
Sbjct: 323 QMILRECSP--NTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCL 380
Query: 297 TSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
+ N D ++ +K+ P +Y +L+ +L + +E ES + + +
Sbjct: 381 SKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVV 440
Query: 356 ADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEA 415
+ +I + E+A IF+ + +R + + + ++++++ A M+
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELL--GVSRSSVTYNTLIDGLCKNKRVEEASQLMDQ 498
Query: 416 ALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYI 474
+ E +P + T ++ +F D++ A + + + S C D Y LI
Sbjct: 499 MIMEG----LKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554
Query: 475 AAGKL 479
AG++
Sbjct: 555 RAGRV 559
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S A+N Y L++ CK E A +F++M+ L ++V +N L + + E+
Sbjct: 432 SGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEE 491
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNL 256
L++QM + D TY + + + DI+ + M N CE TY L
Sbjct: 492 ASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD--IFTYGTL 549
Query: 257 ASIYVKAELFEKAELALKKLE 277
+A + A L+ ++
Sbjct: 550 IGGLCRAGRVDVASKLLRSVQ 570
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 27/314 (8%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKM---HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
+ +L + GR ALE+ + M+ + + +SY +G A+++ + L
Sbjct: 421 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL---------ISGFLKADRFGDALEL 471
Query: 140 YA--------KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLR 191
+ N YT+ +N Y K + +A+ +E M + + VA N + +
Sbjct: 472 FKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 531
Query: 192 LGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRW 250
G+ + + +++K +S D +TY + ++ S + D ++FY+M N C
Sbjct: 532 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV-- 589
Query: 251 TTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWG 308
++L KA ++A +L+EM +P D L L + ++ +
Sbjct: 590 LVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 649
Query: 309 ILKSTFPPTNTSYLVLLQALAKLNAI-DILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
+ S +PP +Y +L L K A+ D L + C D+ + +I ++++
Sbjct: 650 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIP-DLSSYNTVIYGLVKEE 708
Query: 368 MYEEAALIFNNAKK 381
Y EA IF KK
Sbjct: 709 RYNEAFSIFCQMKK 722
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 122/314 (38%), Gaps = 42/314 (13%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME V+ ++ Y C+R L + R+ A ++ ME+ V + +
Sbjct: 300 MEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGR 359
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I+ A+ F + S+ +R TY LL+ + ++ + ++ M + N VA+
Sbjct: 360 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTA 419
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ ++G+ + + ++MKQ+ I + YS
Sbjct: 420 VIDALCQVGRVFEALEMFDEMKQKGIV---------PEQYS------------------- 451
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTS--NLDA 302
Y++L S ++KA+ F A K ++ P+ H L Y S ++ A
Sbjct: 452 --------YNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKA 503
Query: 303 VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
+ R + P + +L LAK + + K+ F E ++ S D ++I+
Sbjct: 504 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKC 563
Query: 363 YLQKDMYEEAALIF 376
+ ++EA IF
Sbjct: 564 CSKASKFDEAVKIF 577
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 7/228 (3%)
Query: 125 NGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
N I AE F + E + +TY LL+ K + E L + E+M + V +
Sbjct: 848 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 907
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N + + ++ + E+ L + + S TY + I+ E +F EM
Sbjct: 908 NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 967
Query: 243 -ECEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNL 300
C+ C T Y+ L + + A EK L +++ D K+Y +I C L
Sbjct: 968 YGCKANC--TIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 1025
Query: 301 -DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
D + +L+ P +Y +L+ L K ++ F E + +
Sbjct: 1026 NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 1073
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 123/291 (42%), Gaps = 5/291 (1%)
Query: 97 EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCY 154
E++ ME + + + + + + I A++ F + E + Y Y ++++C
Sbjct: 281 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 340
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
C+ +RAL LF++M + + + + L + GQ E + LVN+M+ + I L+
Sbjct: 341 CRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 400
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE-LAL 273
+ + + Y +D R+ M + + + Y+++AS K ++A+ L
Sbjct: 401 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF-AYNSIASGLCKLNRKDEAKGLLF 459
Query: 274 KKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF-PPTNTSYLVLLQALAKLN 332
+E + ++ LI +YC N RV+ ++ P +Y VL+ +K
Sbjct: 460 SMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 519
Query: 333 AIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ + +E E+R D+ +I + A +F+ +R
Sbjct: 520 NMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG 570
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 127/335 (37%), Gaps = 44/335 (13%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAKNRYTYGA 149
+ ALE E ME + H VYL + + + ++F + + Y+
Sbjct: 171 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
+L+ CK E L +++ N V +N Y + V ++ M++
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-----------------CN---------- 242
++ + +TY + + +S++ I+ +R+F EM CN
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350
Query: 243 ----ECEDKC---RWTTYSNLASIYVKAELFEKAELALKKLE----EMKPRDRKAYHFLI 291
E DK TY L KA E A++ + +++ ++ P ++ LI
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP---VIFNTLI 407
Query: 292 SLYCNTSNLDAVNRVWGILKSTFPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
YC + +D R+ +++ ++ +Y + L KLN D K R S
Sbjct: 408 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 467
Query: 351 YDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA 385
+ +I Y ++ + EA +F +++ N
Sbjct: 468 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV 502
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
YC K G + A V ME + + + V +D +K + A K + L
Sbjct: 480 YC-----KEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 534
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ YT +L++ C + + AL LF++M + + N V + + + + G+ E+
Sbjct: 535 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 594
Query: 199 RPLVNQMKQRNISLDNLTY 217
L ++MK+ ++ D+ Y
Sbjct: 595 FKLYDEMKETGLTPDDTVY 613
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGL---SEYAKNRYTYGALLNCYCKELMTERALALFEKM 170
F+ L++ A TN K F+G S + ALL Y K+ E A +F++
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
E + V++N++ + Y + GQ K + +MK+R + +D +T+I + +H +
Sbjct: 557 RE----KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLV 612
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA--------------------- 269
+ E+ F M +C+ S + +Y +A EKA
Sbjct: 613 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILA 672
Query: 270 -----------ELALKKLEEMKPRDRKAYHFLISLYCNTSN 299
LA +K+ MKP D AY L ++Y + +
Sbjct: 673 ACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 713
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 21/240 (8%)
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
AL+ Y K AL LF+ E+ +GN V++ + + +L+ E+ L ++MK++
Sbjct: 335 ALMVAYSKCTAMLDALRLFK---EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 209 NISLDNLTYIVWMQSYSHLNDID---GVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + TY V + + ++ + V + YE + T + L YVK
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS--------TVGTALLDAYVK--- 440
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVL 324
K E A K + +D A+ +++ Y T +A +++G L K P ++ +
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSI 500
Query: 325 LQALAKLNAIDILKQCFEEW--ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
L A NA + F + +SR S + ++ ++ Y +K E A +F +++
Sbjct: 501 LNVCAATNASMGQGKQFHGFAIKSRLDS-SLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 135/335 (40%), Gaps = 18/335 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M + + D++ Y + G+ A + + M R + F + +D K
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM 321
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
++ A ++E N YTY AL++ YC + A+ + M N ++N
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI 381
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE- 243
L Y + + + + L+++M ++N++ D +TY MQ + +F EMC+
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441
Query: 244 -CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTS 298
D YS L + K ++ ALK L+EM R K Y LI
Sbjct: 442 LLPD---LMAYSILLDGFCKHGHLDE---ALKLLKEMHERRIKPNIILYTILIRGMFIAG 495
Query: 299 NLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLAD 357
L+ ++ L + P +Y V+++ L K D + F + E D +
Sbjct: 496 KLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYN 555
Query: 358 VIIRAYLQ-KDMYEEAALIFNNAKKRANASARFFK 391
VII+ +LQ +D LI KR +A + F+
Sbjct: 556 VIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQ 590
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 146/375 (38%), Gaps = 12/375 (3%)
Query: 110 SYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALF 167
S +F +L AK ++A N + + N Y+ L+NC C+ + A+++
Sbjct: 95 SVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVM 154
Query: 168 EKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHL 227
KM +L + + FN L G+ ++ L N+M + ++Y +
Sbjct: 155 GKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKN 214
Query: 228 NDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKA 286
+ RVF +M + K TY+ + K L +A E + ++ P D
Sbjct: 215 GNTIMAVRVFRKM-EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT 273
Query: 287 YHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
Y+ ++ +C+ L+ R++ ++ P ++ +L+ L K + + E
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMT 333
Query: 346 SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQ 405
+ + + + ++ Y + +EA + A S + Y +S++
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVL--GIMIGKGCAPNLSSYNILINGYCKSKR 391
Query: 406 LDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFS 464
+NE + LSE + + P VT T + + A K + S L D
Sbjct: 392 ----MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLM 447
Query: 465 AYSLLIKTYIAAGKL 479
AYS+L+ + G L
Sbjct: 448 AYSILLDGFCKHGHL 462
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 140/341 (41%), Gaps = 22/341 (6%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ CK+ + A+ +M + + V +N + + LGQ + L
Sbjct: 235 NVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLF 294
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+M RN+ D +T+ + + + R E E + TY+ L Y
Sbjct: 295 KEMVGRNVMPDTVTFNILVDGLCKEGMVSEA-RCVSETMTEKGAEPNAYTYNALMDGYC- 352
Query: 263 AELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPT 317
L + + A+K L M + + +Y+ LI+ YC + ++ R+ + + P
Sbjct: 353 --LHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPD 410
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y L+Q L ++ F+E S D+ +++ + + +EA +
Sbjct: 411 TVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLK 470
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAA---LSEAKQFHWRPMQVTVDT 434
+R + + + ++Y + R + +A ++E A S+ RP T +
Sbjct: 471 EMHER--------RIKPNIILYTILIRGMFIA-GKLEVAKELFSKLSADGIRPDIWTYNV 521
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYI 474
+ +E D A EF + ++ L D +Y+++I+ ++
Sbjct: 522 MIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFL 562
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 77 DMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
D++ Y + K G AL++++ M R++ + + + + + A++ F
Sbjct: 445 DLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELF 504
Query: 135 NGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
+ LS + +TY ++ KE +++ A F KM++ FL ++ ++N + +L+
Sbjct: 505 SKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQN 564
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSH 226
L+++M + S D+ T+ + + SH
Sbjct: 565 QDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESH 598
>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia seriphioides]
Length = 416
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 134/302 (44%), Gaps = 7/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + AL ++ ME ++ ++ ++L+ K + A F+ L S + +
Sbjct: 23 KEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 82
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y A++N + K + A +L +M + NT +++ L TMY+ + + + ++M
Sbjct: 83 AYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYSTLLTMYVENKKFLEALSVFSEM 142
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ LD T + + Y L +++F+ M + + +Y+ L +Y AEL
Sbjct: 143 REVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM-RKMGIEPNVVSYNTLLRVYGDAEL 201
Query: 266 FEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYL 322
F +A + L +L + K ++ Y+ +I +Y T + N + ++S P + +Y
Sbjct: 202 FGEA-IHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 260
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ K+ +D F++ S D L +I AY + + A + + K+
Sbjct: 261 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP 320
Query: 383 AN 384
N
Sbjct: 321 DN 322
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +RYTY L+ + KE + + AL+ +KM++ + G+ V ++NL + +L K
Sbjct: 8 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 67
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYS 254
+ +++K+ + D + +Y+ + ++ G ++F E + +E + +YS
Sbjct: 68 IFSRLKRSGFTPD-------LVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYS 120
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKS 312
L ++YV+ + F +A ++ E+K D + +I +Y +++ WG+ K
Sbjct: 121 TLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 180
Query: 313 TFPPTNTSYLVLLQA 327
P SY LL+
Sbjct: 181 GIEPNVVSYNTLLRV 195
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 11/238 (4%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N Y L++ CK+ A LF KM+ L + N ++ L + + G +
Sbjct: 190 SPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQ 249
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ MK+ I + Y + Y + +D +VF EM E C TY+ L
Sbjct: 250 MYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEM-REKGIACGVMTYNILIGGL 308
Query: 261 VKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTN 318
+ + F +A + K+ ++ + Y+ LI+ +C+ +D+ R++ LKS+ PT
Sbjct: 309 CRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTL 368
Query: 319 TSYLVLLQALAKL----NAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+Y L+ +K+ A+D++K E E RC + ++I A+ + + E+A
Sbjct: 369 VTYNTLIAGYSKVENLAGALDLVK----EMEERCIAPSKVTYTILIDAFARLNHTEKA 422
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLN 152
AL++++ ME R + S + + +D A+ N A + + + S + YTY LL+
Sbjct: 387 ALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLH 446
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
C + A LF+ + E+ N+V +N + Y + G + L+N+M Q +
Sbjct: 447 GLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGM 504
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 151/347 (43%), Gaps = 42/347 (12%)
Query: 134 FNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
F+ +SE +N +T+ NC L+ R LA K+ + + N+V++ L T Y R G
Sbjct: 57 FDEMSE--RNVFTW----NCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCG 110
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ + R L N++ RN+ +++ + Y+ + +F M D W T
Sbjct: 111 RVAEARELFNRIPDRNV----VSWNAMVSGYARNGMVKRARELFDMM--PWRDDVSWLT- 163
Query: 254 SNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST 313
+ S Y+K + +A + + M + L+S Y + A ++G +++
Sbjct: 164 --MISGYIKRKHVREAR---ELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTR 218
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P S+ V++ A+ ++ I ++ F+E + D+ I+R YLQ + A
Sbjct: 219 NP---VSWNVMITGYARAGSMGIAQRLFDEMPEK----DVLSRTAIMRGYLQNGSVDAAW 271
Query: 374 LIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVD 433
+F + R + + M ++R+ +LD AL ++ + + + Q W +
Sbjct: 272 KVFKDMPHRDTVAW------NTMMDGFVRNDRLDDAL-KLFSEMPDRDQISW-------N 317
Query: 434 TFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLA 480
+ + ++ D+D A + + + + + +++ LI Y G L+
Sbjct: 318 AILQGYVQQGDMDSANAWFRRAPNKDAI---SWNTLISGYKDEGALS 361
>gi|186478661|ref|NP_564088.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|8778424|gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana]
gi|332191742|gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 725
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 6/245 (2%)
Query: 102 MESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELM 159
++ + + S +D++ + + AK N I E+ +S+ + T AL++ Y K
Sbjct: 375 LDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGN 434
Query: 160 TERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIV 219
ERA FE + + + + Y+ G+P+ L+ +M+ + + Y+
Sbjct: 435 FERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMA 494
Query: 220 WMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM 279
+++Y+ + D +G + M + + YS Y KA +KA+ ++ ++
Sbjct: 495 LLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKL 554
Query: 280 --KPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDI 336
KP D K L+ Y ++LD A+ + + K +Y VL+ +A L I+
Sbjct: 555 GHKP-DDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEE 613
Query: 337 LKQCF 341
+Q
Sbjct: 614 AEQLL 618
>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 938
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 9/248 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTY 147
G+ + A+++++ M ++H + T + ++LD+++K A K L Y +R Y
Sbjct: 622 GKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L+ CK MT +A + E M+ F+ +TV FN L Y K + M +
Sbjct: 682 NTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMME 741
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
IS + TY ++ S I VE+ EM + R ++ A I +A++
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSR---GMRPDDFTYNALISGQAKIGN 798
Query: 268 KAE---LALKKLEEMKPRDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYLV 323
K E + + + + Y+ LIS + L A + + K P ++Y
Sbjct: 799 KKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCT 858
Query: 324 LLQALAKL 331
++ L KL
Sbjct: 859 MISGLCKL 866
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 65 NAYIMEGKTVRKDMLEY-----------CVRSLRKFGRYRHALEVIEWMESRKMHFSYTD 113
+ +MEG + ++M E V SL K YRHAL + M R +
Sbjct: 272 DGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVV 331
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMD 171
+ V + K + AEK F L E N TY AL++ CK A + +M
Sbjct: 332 YTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 172 ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
E N V ++++ Y++ G E+ L+ +M+ +N+ + TY
Sbjct: 392 EKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTY 437
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 102/242 (42%), Gaps = 26/242 (10%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +++ C+ + + A +M ++ L +TV+FN L + ++G + + LV+++
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEI 222
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ N+ +T+ + + SY +L+ +E + +M D T+S++ + K
Sbjct: 223 SELNL----ITHTILISSYYNLH---AIEEAYRDMVMSGFDP-DVVTFSSIINRLCKDGK 274
Query: 266 FEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLV 323
+ L L+++EEM P + SL+ A+ ++ P Y V
Sbjct: 275 VMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTV 334
Query: 324 LLQALAKLN----AIDILKQCFEEWE------------SRCSSYDMRLADVIIRAYLQKD 367
L+ L K A K E+ E C + D+ A+ II L+K
Sbjct: 335 LMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKS 394
Query: 368 MY 369
++
Sbjct: 395 VF 396
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 136/348 (39%), Gaps = 43/348 (12%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
+S + + T+ +++N CK+ L +M+E+ N V + L +
Sbjct: 252 MSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYR 311
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
L +QM R I +D + Y V M D+ E+ F +M E + TY+ L
Sbjct: 312 HALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTF-KMLLEDNEVPNVVTYTAL 370
Query: 257 ASIYVKAELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTF 314
KA AE + + LE+ + Y +I+ Y L +AV+ + +
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNV 430
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P +Y ++ L K ++ + S +MRL V +++ Y AL
Sbjct: 431 VPNGFTYGTVIDGLFKAGKQEVASEM---------SKEMRLIGV------EENNYILDAL 475
Query: 375 IFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
+ N KR R +++ + +M + ++ + +D
Sbjct: 476 V--NHLKRIG-----------------RIKEVKGLVKDMVSKGVTLDHINYTSL---IDV 513
Query: 435 FFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLASD 482
FF+ +EE + AEE + K + D +Y++LI + GK+ +D
Sbjct: 514 FFKGGDEEAALSWAEEMQE--KEMP-WDVVSYNVLISGLLKFGKVGAD 558
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 123/291 (42%), Gaps = 5/291 (1%)
Query: 97 EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCY 154
E++ ME + + + + + + I A++ F + E + Y Y ++++C
Sbjct: 285 EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCN 344
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
C+ +RAL LF++M + + + + L + GQ E + LVN+M+ + I L+
Sbjct: 345 CRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP 404
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAE-LAL 273
+ + + Y +D R+ M + + + Y+++AS K ++A+ L
Sbjct: 405 VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVF-AYNSIASGLCKLNRKDEAKGLLF 463
Query: 274 KKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF-PPTNTSYLVLLQALAKLN 332
+E + ++ LI +YC N RV+ ++ P +Y VL+ +K
Sbjct: 464 SMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRG 523
Query: 333 AIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ + +E E+R D+ +I + A +F+ +R
Sbjct: 524 NMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG 574
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 127/335 (37%), Gaps = 44/335 (13%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS--EYAKNRYTYGA 149
+ ALE E ME + H VYL + + + ++F + + Y+
Sbjct: 175 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
+L+ CK E L +++ N V +N Y + V ++ M++
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-----------------CN---------- 242
++ + +TY + + +S++ I+ +R+F EM CN
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354
Query: 243 ----ECEDKC---RWTTYSNLASIYVKAELFEKAELALKKLE----EMKPRDRKAYHFLI 291
E DK TY L KA E A++ + +++ ++ P ++ LI
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNP---VIFNTLI 411
Query: 292 SLYCNTSNLDAVNRVWGILKSTFPPTNT-SYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
YC + +D R+ +++ ++ +Y + L KLN D K R S
Sbjct: 412 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 471
Query: 351 YDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA 385
+ +I Y ++ + EA +F +++ N
Sbjct: 472 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV 506
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
YC K G + A V ME + + + V +D +K + A K + L
Sbjct: 484 YC-----KEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 538
Query: 141 A--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
+ YT +L++ C + + AL LF++M + + N V + + + + G+ E+
Sbjct: 539 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 598
Query: 199 RPLVNQMKQRNISLDNLTY 217
L ++MK+ ++ D+ Y
Sbjct: 599 FKLYDEMKETGLTPDDTVY 617
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 10/216 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L + + + A+ V++ M + + + + + A + I A +YF + E
Sbjct: 590 IHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 649
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y Y LL CK + ALA+ +M K NT +N L + R G +
Sbjct: 650 KLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAED 709
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+ QMK+ + + TY ++ + D+ E+V EM + K TY+ L +
Sbjct: 710 LMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVD-VGLKPNVKTYTTLIKGW 768
Query: 261 VKAELFEKAELALKKLEEMK----PRDRKAYHFLIS 292
+ L ++ ALK EEMK D +YH L++
Sbjct: 769 ARVSLPDR---ALKCFEEMKLAGLKPDEASYHCLVT 801
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 141/386 (36%), Gaps = 51/386 (13%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ +R +G ++ Y K A A FE M N F +L Y
Sbjct: 293 HEPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGAL 352
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDI------------------DGVER------ 235
V +MK + L +TY + + ++ +ND DG++
Sbjct: 353 SCVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYH 412
Query: 236 ----------------VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM 279
V +E EC K +Y L ++YVK KA K++E
Sbjct: 413 SMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESC 472
Query: 280 KPR-DRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDIL 337
+ + K Y LI+ + + + +A +L+S P Y +L++A K+ +D
Sbjct: 473 GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRA 532
Query: 338 KQCFEEWESRCSSYDMRLADVIIRAY-LQKDMYEEAALIFNNAKKRANASARFFKSRESF 396
E+ + R II Y + DM ++AL + +R+ + +
Sbjct: 533 ICILEKMQKERMQPSNRAFRPIIEGYAVAGDM--KSALDTLDLMRRSGCVPTVM-TYNAL 589
Query: 397 MIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA-EEFCKVL 455
+ +R ++ A+ + L + P + T R + D+ A E F K+
Sbjct: 590 IHGLVRKHKVQRAV----SVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 645
Query: 456 KSLNCLDFSAYSLLIKTYIAAGKLAS 481
+S LD Y L++ +G++ S
Sbjct: 646 ESGLKLDVYIYETLLRACCKSGRMQS 671
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 47/259 (18%), Positives = 102/259 (39%), Gaps = 3/259 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G A+ ++E M+ +M S F ++ A + +A + + S
Sbjct: 525 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVM 584
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ ++ +RA+++ +KM N + + Y G K ++
Sbjct: 585 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI 644
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ + LD Y +++ + V EM + + + + + ++
Sbjct: 645 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 704
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVL 324
+E +L + E+ P + Y I+ C ++ +V ++ P +Y L
Sbjct: 705 WEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTL 764
Query: 325 LQALAKLNAIDILKQCFEE 343
++ A+++ D +CFEE
Sbjct: 765 IKGWARVSLPDRALKCFEE 783
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 110/279 (39%), Gaps = 43/279 (15%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF------------- 134
K G+ A +++ M ++++H + F + +D + + AA+K F
Sbjct: 276 KAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVV 335
Query: 135 ------NGLSEYAK------------------NRYTYGALLNCYCKELMTERALALFEKM 170
NGL K N TY AL+N +CK+ M + A + + +
Sbjct: 336 TYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
+ N + FN L Y + G+ + L + M + + TY + + ++
Sbjct: 396 GKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNV 455
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA---- 286
++ EM K TY+ L K KA L ++ M+ + R+A
Sbjct: 456 KEARKLAKEMEGNGL-KADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVT 514
Query: 287 YHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVL 324
Y+ LI +CN L+ NR+ +L+ P T+Y +L
Sbjct: 515 YNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 10/216 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L + + + A+ V++ M + + + + + A + I A +YF + E
Sbjct: 585 IHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 644
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y Y LL CK + ALA+ +M K NT +N L + R G +
Sbjct: 645 KLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAED 704
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+ QMK+ + + TY ++ + D+ E+V EM + K TY+ L +
Sbjct: 705 LMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVD-VGLKPNVKTYTTLIKGW 763
Query: 261 VKAELFEKAELALKKLEEMK----PRDRKAYHFLIS 292
+ L ++ ALK EEMK D +YH L++
Sbjct: 764 ARVSLPDR---ALKCFEEMKLAGLKPDEASYHCLVT 796
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/292 (18%), Positives = 110/292 (37%), Gaps = 80/292 (27%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGAL 150
R AL +E M+S + + +++ + AK N +A+ F + N Y +
Sbjct: 315 RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNI 374
Query: 151 LNCYCKELMTERA-----------------------------------LALFEKMDELKF 175
++ +C+ ERA L +FE++ E F
Sbjct: 375 IHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGF 434
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ +++ L +Y+++G+ K + +M+ I +N TY + + + HL+D
Sbjct: 435 KPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFA 494
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYC 295
+F EM ++P DR Y+ LI +C
Sbjct: 495 IFEEMLRSG----------------------------------LQP-DRAIYNLLIEAFC 519
Query: 296 NTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALA-------KLNAIDILKQ 339
N+D A+ + + K P+N ++ +++ A L+ +D++++
Sbjct: 520 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRR 571
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 94/238 (39%), Gaps = 7/238 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R +G ++ Y K A A FE M N F +L Y V
Sbjct: 262 SRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCV 321
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK + L +TY + + ++ +ND + +F E + YSN+ + +
Sbjct: 322 EEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKL-SSLNGIIYSNIIHAHCQ 380
Query: 263 AELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+ E+AE + ++EE P D YH ++ Y N + V+ LK F P+
Sbjct: 381 SGNMERAEELVCEMEEDGIDAPID--VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 438
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY LL K+ + +E ES ++ + ++I ++ + A IF
Sbjct: 439 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIF 496
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 47/259 (18%), Positives = 102/259 (39%), Gaps = 3/259 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G A+ ++E M+ +M S F ++ A + +A + + S
Sbjct: 520 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVM 579
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ ++ +RA+++ +KM N + + Y G K ++
Sbjct: 580 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI 639
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ + LD Y +++ + V EM + + + + + ++
Sbjct: 640 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 699
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVL 324
+E +L + E+ P + Y I+ C ++ +V ++ P +Y L
Sbjct: 700 WEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTL 759
Query: 325 LQALAKLNAIDILKQCFEE 343
++ A+++ D +CFEE
Sbjct: 760 IKGWARVSLPDRALKCFEE 778
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG-LSEYA 141
+R+ + G ++ +++V M+S + S F L + K A+K ++ LS Y
Sbjct: 156 MRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYG 215
Query: 142 --KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ +T+ L+ +C M + +F + + V +N L R G+
Sbjct: 216 VTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAY 275
Query: 200 PLVNQMKQRNISLDN--LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+V M ++++ L+ +TY ++ Y +I+ VF EM N+ K TY+ L
Sbjct: 276 NVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQ-GLKANNITYNTLI 334
Query: 258 SIYVKAELFEKAELALKKLE---EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-T 313
+A FEK + L+ P D ++ L+ +C+ NLD +V+ +
Sbjct: 335 KGLCEARKFEKIKDILEGTAGDGTFSP-DTCTFNTLMHCHCHAGNLDDALKVFERMSELK 393
Query: 314 FPPTNTSYLVLLQALAK 330
P + +Y L+++L +
Sbjct: 394 IQPDSATYSALVRSLCQ 410
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY L+ YC + E+ALA+FE+M N + +N L + EK++ ++
Sbjct: 291 NVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDIL 350
Query: 203 -NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
S D T+ M + H ++D +VF M +E + + TYS L
Sbjct: 351 EGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERM-SELKIQPDSATYSALVRSLC 409
Query: 262 KAELFEKAELALKKLEEMK 280
+ +EKAE L KL E K
Sbjct: 410 QGGHYEKAEDLLDKLLERK 428
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 30/209 (14%)
Query: 136 GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
G ++ + T+ L++C+C + AL +FE+M ELK ++ ++ L + G
Sbjct: 355 GDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHY 414
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
EK L++++ +R I L + +Y+ +F +C + K
Sbjct: 415 EKAEDLLDKLLERKILLSGDGCKPLVAAYN---------PIFKYLCETGKTK-------- 457
Query: 256 LASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI-LKSTF 314
KAE A ++L +D +Y LI +C ++ + + L+ F
Sbjct: 458 ------------KAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDF 505
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEE 343
P +Y L+ L ++ + Q E+
Sbjct: 506 XPDFETYESLINGLLHMDKPLLALQSLEK 534
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 149/358 (41%), Gaps = 37/358 (10%)
Query: 10 ISTGSYLVRQLCSTPTETVSQRIAAPTPFPTGNEDK---LYKRLSALGATGG--SVTGAL 64
I T + L++ LC +V+ I G+ED+ +++ + A G S + +
Sbjct: 45 IVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLV 104
Query: 65 NAYIMEGK--------------TVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMH 108
+ + GK V+ +++++ + L K G+ A +++E R +
Sbjct: 105 HGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGII 164
Query: 109 FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALAL 166
+ +D K +++A K F + N +Y L+N YCK E A+ L
Sbjct: 165 LDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNL 224
Query: 167 FEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSH 226
+ +M ++ N ++ L T L+ G+ L MK IS+D+ Y++++
Sbjct: 225 YNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCK 284
Query: 227 LNDIDGVERVFYEMCNECED---KCRWTTYSNLASIYVKAELFEKAELALKKL--EEMKP 281
+GV E+ NE + K + +YS L KA E A K+L E ++P
Sbjct: 285 ----NGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQP 340
Query: 282 RDRKAYHFLISLYCNTSNLDAVNRVWGIL----KSTFPPTNTSYLVLLQALAKLNAID 335
+ + +I +C +D N ++ + ++ P +Y LL+ + N ++
Sbjct: 341 -NVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLE 397
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 134/308 (43%), Gaps = 10/308 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N +Y +L++ +C E + LF +M + N V FN L + + G+ + + L+
Sbjct: 96 NVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLL 155
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASIYV 261
QR I LD +TY + + + D+ ++F M ++ CE +Y+ L + Y
Sbjct: 156 EVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEH--NEISYTILINGYC 213
Query: 262 KAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS 320
K E+A ++ ++ R + K Y L++ T + N+++G++K++ ++
Sbjct: 214 KIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSC 273
Query: 321 -YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
Y++ L L K + + F E +S D +I + E A F
Sbjct: 274 IYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFF--- 330
Query: 380 KKRANASARFFKSRESFMIY-YLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRF 438
K+ + + + MI+ + R Q+D A N + + + ++ P +T +T R
Sbjct: 331 KQLSQEGLQPNVVTCNIMIHGFCRVEQVDKA-NILFEKMEKMEENGCTPDIITYNTLLRG 389
Query: 439 FEEEKDVD 446
F E ++
Sbjct: 390 FCESNKLE 397
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 40 TGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI 99
G+ +KL+ + A+G SV + ++G L K G A+E+
Sbjct: 253 VGDANKLF---GVMKASGISVDSCIYVIFLDG--------------LCKNGVLFEAMELF 295
Query: 100 EWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKE 157
++S + ++ +D K + A ++F LS+ N T +++ +C+
Sbjct: 296 NELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRV 355
Query: 158 LMTERALALFEKMDELKFLGNT---VAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
++A LFEKM++++ G T + +N L + + E+V L+++M +R
Sbjct: 356 EQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 10/216 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L + + + A+ V++ M + + + + + A + I A +YF + E
Sbjct: 564 IHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 623
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y Y LL CK + ALA+ +M K NT +N L + R G +
Sbjct: 624 KLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAED 683
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+ QMK+ + + TY ++ + D+ E+V EM + K TY+ L +
Sbjct: 684 LMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVD-VGLKPNVKTYTTLIKGW 742
Query: 261 VKAELFEKAELALKKLEEMK----PRDRKAYHFLIS 292
+ L ++ ALK EEMK D +YH L++
Sbjct: 743 ARVSLPDR---ALKCFEEMKLAGLKPDEASYHCLVT 775
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/292 (18%), Positives = 110/292 (37%), Gaps = 80/292 (27%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGAL 150
R AL +E M+S + + +++ + AK N +A+ F + N Y +
Sbjct: 294 RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNI 353
Query: 151 LNCYCKELMTERA-----------------------------------LALFEKMDELKF 175
++ +C+ ERA L +FE++ E F
Sbjct: 354 IHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGF 413
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ +++ L +Y+++G+ K + +M+ I +N TY + + + HL+D
Sbjct: 414 KPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFA 473
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYC 295
+F EM ++P DR Y+ LI +C
Sbjct: 474 IFEEMLRSG----------------------------------LQP-DRAIYNLLIEAFC 498
Query: 296 NTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALA-------KLNAIDILKQ 339
N+D A+ + + K P+N ++ +++ A L+ +D++++
Sbjct: 499 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRR 550
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 7/238 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R +G ++ Y K A A FE M N F +L Y V
Sbjct: 241 SRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCV 300
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK + L +TY + + ++ +ND + +F E + YSN+ + +
Sbjct: 301 EEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKL-SSLNGIIYSNIIHAHCQ 359
Query: 263 AELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+ E+AE ++++EE P D YH ++ Y N + V+ LK F P+
Sbjct: 360 SGNMERAEELVREMEEDGIDAPID--VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 417
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY LL K+ + +E ES ++ + ++I ++ + A IF
Sbjct: 418 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIF 475
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 47/259 (18%), Positives = 102/259 (39%), Gaps = 3/259 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G A+ ++E M+ +M S F ++ A + +A + + S
Sbjct: 499 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVM 558
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ ++ +RA+++ +KM N + + Y G K ++
Sbjct: 559 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI 618
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ + LD Y +++ + V EM + + + + + ++
Sbjct: 619 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 678
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVL 324
+E +L + E+ P + Y I+ C ++ +V ++ P +Y L
Sbjct: 679 WEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTL 738
Query: 325 LQALAKLNAIDILKQCFEE 343
++ A+++ D +CFEE
Sbjct: 739 IKGWARVSLPDRALKCFEE 757
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 10/216 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L + + + A+ V++ M + + + + + A + I A +YF + E
Sbjct: 586 IHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 645
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y Y LL CK + ALA+ +M K NT +N L + R G +
Sbjct: 646 KLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAED 705
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+ QMK+ + + TY ++ + D+ E+V EM + K TY+ L +
Sbjct: 706 LMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVD-VGLKPNVKTYTTLIKGW 764
Query: 261 VKAELFEKAELALKKLEEMK----PRDRKAYHFLIS 292
+ L ++ ALK EEMK D +YH L++
Sbjct: 765 ARVSLPDR---ALKCFEEMKLAGLKPDEASYHCLVT 797
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/292 (18%), Positives = 110/292 (37%), Gaps = 80/292 (27%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGAL 150
R AL +E M+S + + +++ + AK N +A+ F + N Y +
Sbjct: 316 RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNI 375
Query: 151 LNCYCKELMTERA-----------------------------------LALFEKMDELKF 175
++ +C+ ERA L +FE++ E F
Sbjct: 376 IHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGF 435
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVER 235
+ +++ L +Y+++G+ K + +M+ I +N TY + + + HL+D
Sbjct: 436 KPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFA 495
Query: 236 VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYC 295
+F EM ++P DR Y+ LI +C
Sbjct: 496 IFEEMLRSG----------------------------------LQP-DRAIYNLLIEAFC 520
Query: 296 NTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALA-------KLNAIDILKQ 339
N+D A+ + + K P+N ++ +++ A L+ +D++++
Sbjct: 521 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRR 572
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 7/238 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R +G ++ Y K A A FE M N F +L Y V
Sbjct: 263 SRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCV 322
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK + L +TY + + ++ +ND + +F E + YSN+ + +
Sbjct: 323 EEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKL-SSLNGIIYSNIIHAHCQ 381
Query: 263 AELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+ E+AE ++++EE P D YH ++ Y N + V+ LK F P+
Sbjct: 382 SGNMERAEELVREMEEDGIDAPID--VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 439
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
SY LL K+ + +E ES ++ + ++I ++ + A IF
Sbjct: 440 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIF 497
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 47/259 (18%), Positives = 102/259 (39%), Gaps = 3/259 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G A+ ++E M+ +M S F ++ A + +A + + S
Sbjct: 521 KMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVM 580
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ ++ +RA+++ +KM N + + Y G K ++
Sbjct: 581 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI 640
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ + LD Y +++ + V EM + + + + + ++
Sbjct: 641 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 700
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVL 324
+E +L + E+ P + Y I+ C ++ +V ++ P +Y L
Sbjct: 701 WEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTL 760
Query: 325 LQALAKLNAIDILKQCFEE 343
++ A+++ D +CFEE
Sbjct: 761 IKGWARVSLPDRALKCFEE 779
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 11/257 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNG-LSEYA 141
+R+ + G ++ +++V M+S + S F L + K A+K ++ LS Y
Sbjct: 156 MRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYG 215
Query: 142 --KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ +T+ L+ +C M + +F + + V +N L R G+
Sbjct: 216 VTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAY 275
Query: 200 PLVNQMKQRNISLDN--LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+V M ++++ L+ +TY ++ Y +I+ VF EM N+ K TY+ L
Sbjct: 276 NVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQ-GLKANNITYNTLI 334
Query: 258 SIYVKAELFEKAELALKKLE---EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-T 313
+A FEK + L+ P D ++ L+ +C+ NLD +V+ +
Sbjct: 335 KGLCEARKFEKIKDILEGTAGDGTFSP-DTCTFNTLMHCHCHAGNLDDALKVFERMSELK 393
Query: 314 FPPTNTSYLVLLQALAK 330
P + +Y L+++L +
Sbjct: 394 IQPDSATYSALVRSLCQ 410
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY L+ YC + E+ALA+FE+M N + +N L + EK++ ++
Sbjct: 291 NVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDIL 350
Query: 203 -NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
S D T+ M + H ++D +VF M +E + + TYS L
Sbjct: 351 EGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERM-SELKIQPDSATYSALVRSLC 409
Query: 262 KAELFEKAELALKKLEEMK 280
+ +EKAE L KL E K
Sbjct: 410 QGGHYEKAEDLLDKLLERK 428
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 30/209 (14%)
Query: 136 GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
G ++ + T+ L++C+C + AL +FE+M ELK ++ ++ L + G
Sbjct: 355 GDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHY 414
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
EK L++++ +R I L + +Y+ +F +C + K
Sbjct: 415 EKAEDLLDKLLERKILLSGDGCKPLVAAYN---------PIFKYLCETGKTK-------- 457
Query: 256 LASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI-LKSTF 314
KAE A ++L +D +Y LI +C ++ + + L+ F
Sbjct: 458 ------------KAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDF 505
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEE 343
P +Y L+ L ++ + Q E+
Sbjct: 506 LPDFETYESLINGLLHMDKPLLALQSLEK 534
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 163/422 (38%), Gaps = 71/422 (16%)
Query: 80 EYCVRSLRKFGRYRHAL-EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA--------- 129
E C+R+ + H EV + E+ ++ F + + D+ T +AA
Sbjct: 254 EGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETE 313
Query: 130 AEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A K+F + E N YTY L++ +CK + + + M E + + V FN L
Sbjct: 314 ALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALID 373
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
Y + G E +++ MK LN + R
Sbjct: 374 GYCKRGMMEDAICVLDSMK--------------------LNKVCPNSR------------ 401
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV 306
TY+ L + + + ++A L K+ E K + Y+ LI C +D+ R+
Sbjct: 402 ----TYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRL 457
Query: 307 WGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
++ K F P ++ + L K+ ++ Q FE + + + + L +I Y +
Sbjct: 458 HHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCK 517
Query: 366 KDMYEEAALIFNNAKKRANASARFFKSRE-SFMIYYLRSRQLDLALNEMEAALSEAK--- 421
+ + +A L+F KR F S + ++ LR ++E A+S
Sbjct: 518 AEKFSDAHLLF----KRMLFEGCFPNSITFNVLLDGLRKE------GKVEDAMSLVDVMG 567
Query: 422 QFHWRPMQVTVDTFFRFFEE---EKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAG 477
+F +P TV T+ EE E D D A F + S C + Y+ IK Y G
Sbjct: 568 KFDAKP---TVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQG 624
Query: 478 KL 479
+L
Sbjct: 625 RL 626
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 115/288 (39%), Gaps = 13/288 (4%)
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
LF+ M N ++FN + + ++G + + + D+ TY + Y
Sbjct: 176 CLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGY 235
Query: 225 SHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVK-AELFEKAELALKKLEEMKP 281
++++ +VF M E C +Y+NL + + ++ E EL + E+
Sbjct: 236 CKIHELGDAYKVFEIMPQE---GCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCF 292
Query: 282 RDRKAYHFLISLYCNTSN-LDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQC 340
D Y L++ +C +A+ ++++ P +Y VL+ K+ +D +
Sbjct: 293 PDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEM 352
Query: 341 FEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYY 400
+ + + +I Y ++ M E+A + ++ K N ++ + +
Sbjct: 353 LSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMK--LNKVCPNSRTYNELICGF 410
Query: 401 LRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGA 448
R + +D A+ A L++ + P VT +T + + VD A
Sbjct: 411 CRKKSMDRAM----ALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSA 454
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 116/285 (40%), Gaps = 44/285 (15%)
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
++N +CK+ + A +KM+ L N V +++L Y+ LG E + ++ M ++
Sbjct: 198 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC-------------EDKCRWTTYSN- 255
+S + +TY + ++ Y +D E+V M E + CR +
Sbjct: 258 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 317
Query: 256 ---------------------LASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLIS 292
L + Y K +AE + ++ + +KP D +Y+ L+
Sbjct: 318 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP-DSYSYNTLLD 376
Query: 293 LYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSY 351
YC + +A N +L+ PT +Y LL+ L ++ A D Q + R +
Sbjct: 377 GYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 436
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESF 396
D ++ + + +E A+ ++ + R F KSR +F
Sbjct: 437 DEVGYSTLLDGLFKMENFEGASTLWKDILARG-----FTKSRITF 476
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 142/375 (37%), Gaps = 38/375 (10%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ Y+Y LL+ YC+E T A L +KM + + +N L R+G + +
Sbjct: 367 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 426
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ M +R ++ D + Y + + + +G ++ ++ K R T + ++ +
Sbjct: 427 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 486
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSY 321
++ E E+ K + D Y LI YC SN+ +V G + + P+ Y
Sbjct: 487 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMY 546
Query: 322 LVLLQALAK----LNAIDILKQ---------------CFEEW------ESRCSSY----- 351
L+ L K + D+L + + W + SSY
Sbjct: 547 NSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 606
Query: 352 DMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALN 411
+ A++II + + +Y + N + FF E F L+S A+
Sbjct: 607 NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF----LKSDIRYAAIQ 662
Query: 412 EMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL--DFSAYSLL 469
++ +L E+ + P + + + VD A F +L SL D Y L
Sbjct: 663 KIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML-SLKGFVPDNFTYCTL 721
Query: 470 IKTYIAAGKLASDMR 484
I Y AAG + R
Sbjct: 722 IHGYSAAGNVDEAFR 736
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 127/317 (40%), Gaps = 20/317 (6%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME V +++ Y + G A V+++M + + + + + + K
Sbjct: 218 MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCK 277
Query: 127 IAAAEKYFNGLSEYA---KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
+ AEK G+ E A + YG L++ YC+ + A+ L ++M L N N
Sbjct: 278 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 337
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+L Y + G+ + ++ +M N+ D+ +Y + Y +G + +C++
Sbjct: 338 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR----EGHTSEAFNLCDK 393
Query: 244 -CEDKCRWT--TYSNLASIYVKAELFEKA----ELALKKLEEMKPRDRKAYHFLISLYCN 296
++ T TY+ L + F+ A L +K+ + P D Y L+
Sbjct: 394 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR--GVAP-DEVGYSTLLDGLFK 450
Query: 297 TSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
N + + +W IL F + ++ ++ L K+ + ++ F++ + S D
Sbjct: 451 MENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGIT 510
Query: 356 ADVIIRAYLQKDMYEEA 372
+I Y + +A
Sbjct: 511 YRTLIDGYCKASNVGQA 527
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 7/207 (3%)
Query: 105 RKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMTER 162
R+ FS T F + L + + A F+ + + + + + +LLN K T
Sbjct: 116 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 175
Query: 163 ALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
A ++++M + + + + + + + G+ ++ V +M+ + + +TY +
Sbjct: 176 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 235
Query: 223 SYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE---M 279
Y L D++ + V M + + TY+ L Y K ++AE L+ ++E +
Sbjct: 236 GYVSLGDVEAAKGVLKFMSEKGVSR-NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 294
Query: 280 KPRDRKAYHFLISLYCNTSNLDAVNRV 306
P D +AY LI YC T +D R+
Sbjct: 295 VP-DERAYGVLIDGYCRTGKIDDAVRL 320
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY AL+N CK +RA LF K+ + N V +N L Y ++G + L
Sbjct: 749 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 808
Query: 203 NQMKQRNIS 211
++M + IS
Sbjct: 809 DKMIEEGIS 817
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 92/221 (41%), Gaps = 20/221 (9%)
Query: 136 GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
G+ N TYGAL++ +CKE M ++A + + +M E N + + + + RLG+
Sbjct: 570 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 629
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR-WTTYS 254
++ L+ +M D+ ++ Y+ + I + ++ C+ + +
Sbjct: 630 DEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKI----------ADSLDESCKTFLLPN 679
Query: 255 NLASIYVKAELFEKAEL-------ALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
N+ A L + ++ ++ L+ P D Y LI Y N+D R+
Sbjct: 680 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP-DNFTYCTLIHGYSAAGNVDEAFRLR 738
Query: 308 G-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
+L+ P +Y L+ L K +D ++ F + +
Sbjct: 739 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 779
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
L N + +N + G+ + R + + + DN TY + YS ++D
Sbjct: 676 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 735
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLIS 292
R+ EM TY+ L + K+E ++A+ KL + + P + Y+ LI
Sbjct: 736 RLRDEMLRRGLVP-NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP-NVVTYNTLID 793
Query: 293 LYCNTSNLDA 302
YC N+DA
Sbjct: 794 GYCKIGNMDA 803
>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
micromera]
Length = 434
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 132/302 (43%), Gaps = 7/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + AL ++ ME ++ ++ ++L+ K + A F+ L S + +
Sbjct: 27 KEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKXCDYSKAISIFSRLKRSGFTPDLV 86
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y A++N + K + A +L +M + NT +++ L TMY + + + ++M
Sbjct: 87 AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYXENKKFLEALSVFSEM 146
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ LD T + + Y L +++F+ M + + +Y+ L +Y AEL
Sbjct: 147 REIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGM-RKMGIEPNVVSYNTLLRVYGDAEL 205
Query: 266 FEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYL 322
F +A + L +L + K ++ Y+ +I +Y T + N + ++S P + +Y
Sbjct: 206 FGEA-IHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 264
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ K +D F++ S D L +I AY + + A + + K+
Sbjct: 265 TIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP 324
Query: 383 AN 384
N
Sbjct: 325 DN 326
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +RYTY L+ + KE + + AL+ +KM++ + G+ V ++NL + + K
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKXCDYSKAIS 71
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYS 254
+ +++K+ + D + +Y+ + ++ G ++F E + +E + T+YS
Sbjct: 72 IFSRLKRSGFTPD-------LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 124
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKS 312
L ++Y + + F +A ++ E+K D + +I +Y +++ WG+ K
Sbjct: 125 TLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 184
Query: 313 TFPPTNTSYLVLLQA 327
P SY LL+
Sbjct: 185 GIEPNVVSYNTLLRV 199
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 90/207 (43%), Gaps = 9/207 (4%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+N TY +++ Y K L E+A L ++M N++ ++ + +++ + G+ ++ L
Sbjct: 223 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAML 282
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+++ + +D + + + +Y + +R+ +E+ ++ R T LA
Sbjct: 283 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHEL-KRPDNIPRDTAIHILAG--- 338
Query: 262 KAELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST--FPPTN 318
A E+A ++ ++ + +D + +I L V V+ ++ FP +N
Sbjct: 339 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSN 397
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWE 345
V+L A KL D + E +
Sbjct: 398 V-IAVVLNAYGKLQEFDKANDVYMEMQ 423
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 135 NGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
NGL N TY ++ +CKE M + A+ F M + N + +L + G
Sbjct: 354 NGLK---PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 410
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
+ LV ++ Q I L+ +TY + + E VF M N TY+
Sbjct: 411 LAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP-NQETYT 469
Query: 255 NLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
L ++KA+ E A+ LK+++E +KP D Y ++ CN S L+ + G +K
Sbjct: 470 ALVHGFIKAKEMEYAKDILKEMKEKCIKP-DLLLYGTILWGLCNESRLEEAKLLIGEIKE 528
Query: 313 TFPPTNTS-YLVLLQA 327
+ TN Y L+ A
Sbjct: 529 SGINTNAVIYTTLMDA 544
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 123/328 (37%), Gaps = 44/328 (13%)
Query: 130 AEKYFN--GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
+ K+F G + ++ +TY +++ CKE E A +LF +M E F + V +N+L
Sbjct: 239 SRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLID 298
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK 247
+ +LG ++ + QMK + D +TY + + + +EM K
Sbjct: 299 GHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM-KANGLK 357
Query: 248 CRWTTYSNLASIYVKAELFEKA--------------------------------ELALKK 275
TYS + K + ++A ALK
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 417
Query: 276 LEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAK 330
+EE+ K Y L+ C + V+ +L + P +Y L+ K
Sbjct: 418 VEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIK 477
Query: 331 LNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA-NASARF 389
++ K +E + +C D+ L I+ + EEA L+ K+ N +A
Sbjct: 478 AKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVI 537
Query: 390 FKSRESFMIYYLRSRQLDLALNEMEAAL 417
+ + M Y +S Q AL +E L
Sbjct: 538 YT---TLMDAYFKSGQATEALTLLEEML 562
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 2/155 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G+ AL ++E M + + + +D K+ + A +F +SE N
Sbjct: 547 KSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVA 606
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y AL++ CK E A LF++M + + + +A+ L ++ G ++ L ++M
Sbjct: 607 VYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 666
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+ + LD Y + SH + + EM
Sbjct: 667 IEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM 701
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 96/242 (39%), Gaps = 14/242 (5%)
Query: 109 FSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMTERALAL 166
F+YT +D K +A A K + + N TY ALL+ C+E + A +
Sbjct: 396 FTYTSL---IDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEV 452
Query: 167 FEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSH 226
F M N + L +++ + E + ++ +MK++ I D L Y + +
Sbjct: 453 FRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCN 512
Query: 227 LNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA 286
+ ++ + + E+ E Y+ L Y K+ +A AL LEEM A
Sbjct: 513 ESRLEEAKLLIGEI-KESGINTNAVIYTTLMDAYFKSG---QATEALTLLEEMLDLGLIA 568
Query: 287 ----YHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCF 341
Y LI C + + +G + P Y L+ L K N ++ K+ F
Sbjct: 569 TEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLF 628
Query: 342 EE 343
+E
Sbjct: 629 DE 630
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 7/205 (3%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAKNR---YTYGALLNCYCKELMTERALALFEKM 170
+L K+ +A A YF + A+ + TY LL + + T++ LF+ +
Sbjct: 165 IGAHLHSRDKSKALAKALGYFEKMKCIARCQPTIVTYNILLRAFAQAGDTKQVDILFKDL 224
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
DE + +N + Y + G +++ ++ +MK + D +T+ + + SY
Sbjct: 225 DESVVSPDIYTYNGVLDAYGKNGMIKEMESVLLRMKSKQCRPDVITFNILIDSYGRKQIF 284
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYH 288
D +E+VF + +++ T++++ + Y KA L EKAE +KK+EE+ KP +
Sbjct: 285 DKMEQVFKSLLRS-KERPTHPTFNSMITNYGKARLREKAEYVVKKMEELGYKP-NYVTQE 342
Query: 289 FLISLYCNTSNLDAVNRVWGILKST 313
LI +Y + + +V+ L S+
Sbjct: 343 CLIMMYAHCDCVSKARQVFDELVSS 367
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 134/312 (42%), Gaps = 10/312 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G + A ++ + ME +++ + + + + + A+K FN + +
Sbjct: 92 KLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEV 151
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L++ YCK E+A +L +M + N V + L+ +LGQ + L+++M
Sbjct: 152 TYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEM 211
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWT-TYSNLASIYVK-A 263
+ + L+ TY + +I ++ EM E T T++ L Y K
Sbjct: 212 CGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM--EVAGMYPDTITFTTLMDAYCKTG 269
Query: 264 ELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRV--WGILKSTFPPTNTSY 321
E+ + EL + L+ ++ L++ +C + L+ R+ W + K P T T+Y
Sbjct: 270 EMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT-TTY 328
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AK 380
L++ N + + ++ +R D +++I+ + + +EA + A+
Sbjct: 329 NSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAE 388
Query: 381 KRANASARFFKS 392
K N +A + S
Sbjct: 389 KGFNLTASSYNS 400
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 51/290 (17%), Positives = 117/290 (40%), Gaps = 11/290 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTY 147
G + L++I+ M+ + + + + + L K+ + AE+ + + Y
Sbjct: 24 GELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVY 83
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
L++ +CK + A LF++M++ + + + +A+ + R G+ + + N+M
Sbjct: 84 TTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFS 143
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
R + D +TY + Y +++ + +M TY+ LA K
Sbjct: 144 RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP-NVVTYTALADGLCK---LG 199
Query: 268 KAELALKKLEEMKPRDRK----AYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYL 322
+ + A + L EM + + Y+ L++ C + N+ AV + + + P ++
Sbjct: 200 QVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFT 259
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
L+ A K + + E R + +V++ + M E+
Sbjct: 260 TLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDG 309
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 132/332 (39%), Gaps = 22/332 (6%)
Query: 159 MTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM-KQRNISLDNLTY 217
M +AL++F + K + +N++ M ++ GQ EKV + +M + + D +TY
Sbjct: 177 MVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 218 IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE 277
+ SY L D R+F EM + C Y+ L IY K K E AL E
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTE-KIYTTLLGIYFKV---GKVEKALDLFE 292
Query: 278 EMKPRD-RKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLV----LLQALAKLN 332
EMK + L V+ +G K T +V L+ L K+
Sbjct: 293 EMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVG 352
Query: 333 AIDILKQCFEE---WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARF 389
++ L F E W RC+ + VI + K E + F+ K + + + F
Sbjct: 353 RVEELTNVFSEMGMW--RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 390 FKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAE 449
S + Y ++ +++ AL L E + + P + + K + A
Sbjct: 411 TYS--ILIDGYCKTNRVEKAL----LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 450 EFCKVLK-SLNCLDFSAYSLLIKTYIAAGKLA 480
E K LK + + Y+++IK + GKL+
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ + +TY L++ YCK E+AL L E+MDE F A+ +L + + E
Sbjct: 406 SPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANE 465
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L ++K+ ++ + Y V ++ + + +F EM N+ + Y+ L S
Sbjct: 466 LFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY-AYNALMSGM 524
Query: 261 VKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTS-NLDAVNRVWGILKSTFPPTN 318
VKA + +A L+K+EE R D +++ +++ + T A+ I S P
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYD 352
+Y LL A + + E + + YD
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 39/278 (14%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ Y K + A+ LF++M + + L +Y ++G+ EK L +M
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 206 KQRNISLDNLTYIVWM----------QSYSHLNDI--DGV--ERVFY------------- 238
K+ S TY + ++Y D+ DG+ + VF
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 354
Query: 239 -EMCNECEDKCRWTTYSNLAS--IYVKAELFEKAELA-------LKKLEEMKPRDRKAYH 288
E+ N + W + S +KA KA ++ K + + P + Y
Sbjct: 355 EELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF-TYS 413
Query: 289 FLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
LI YC T+ ++ A+ + + + FPP +Y L+ AL K + + F+E +
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA 385
+ R+ V+I+ + + EA +FN K + +
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 123/299 (41%), Gaps = 7/299 (2%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
G + A +V M R + F + + KT+ AA + N +S N Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
++ + +E LF KM FN L + + G ++ L++++ +
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
R + + TY +++Q ++DG R+ + E K TY+NL K F+
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI-EQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 268 KAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVL 324
+AE+ L K+ E ++P D Y+ LI+ YC + R+ G + + F P +Y L
Sbjct: 304 EAEVYLGKMVNEGLEP-DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ L + F E + ++ L + +I+ + M EAA + N ++
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 34/266 (12%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY +LLN CK E + ++ M E N FN L R + ++ L+ +
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK ++++ D +T+ + + D+DG +F +M E+ + ++ + +I + A
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM----EEAYKVSSSTPTYNIIIHA- 611
Query: 265 LFEK--AELALKKLEEMKPR----DRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPT 317
EK +A K +EM R D Y ++ +C T N++ + ++++ F P+
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
T+ ++ L C E+ + II +QK + EA
Sbjct: 672 LTTLGRVINCL-----------CVEDRVYEAAG--------IIHRMVQKGLVPEAVNTIC 712
Query: 378 NAKKRANASARFFKS---RESFMIYY 400
+ K+ A+ + ++S + YY
Sbjct: 713 DVDKKEVAAPKLVLEDLLKKSCITYY 738
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 18/256 (7%)
Query: 129 AAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
+ FNG + +++TY +L++ C E T RALALF + N + +N L
Sbjct: 344 VGDAVFNG---FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN---DIDGVERVFYEMCNECE 245
G + L N+M ++ + + T+ + + + D DG+ +V
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS------ 454
Query: 246 DKCRWT---TYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLD 301
K + T++ L Y E A E+ L+ D Y+ L++ C TS +
Sbjct: 455 -KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 302 AVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
V + +++ P ++ +LL++L + +D EE +++ + D +I
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 361 RAYLQKDMYEEAALIF 376
+ + + A +F
Sbjct: 574 DGFCKNGDLDGAYTLF 589
>gi|357445509|ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482080|gb|AES63283.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 13/271 (4%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGA 149
Y ALE+I+ ++ K+ + L + A AE YFN + + N Y Y +
Sbjct: 190 YPKALELIQELQDNKLRMDDVIYGAILAVCASNGKWEEAEYYFNQMKSEGRSPNVYHYSS 249
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
LLN Y +A AL + M+ N V L +Y+R G EK R L+ +++
Sbjct: 250 LLNAYSACGDFTKADALIQDMESEGLAPNKVILTTLLKVYVRGGLFEKSRELLAKLESLG 309
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ D + Y V M + + +F EM + +S + S + +A+LF++A
Sbjct: 310 YAEDEMPYCVLMDGLAKARQTHEAKIIFDEMMKK-HVMSDGYAHSIIISAFCRAKLFQEA 368
Query: 270 ELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQA 327
+ K + + D + ++ +C +++V + P ++ +L++
Sbjct: 369 KQLAKDFQTTFDKYDVVIMNSMLCAFCRAGEMESVMETLRKMDELAISPDYNTFNILIKY 428
Query: 328 LAKLN--------AIDILKQCFEEWESRCSS 350
+ N +D+ + ++ E CSS
Sbjct: 429 FCRKNMYLLAYRTTMDMHSKGYQPAEELCSS 459
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 123/288 (42%), Gaps = 9/288 (3%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS-EYAK-NRYTYG 148
++ H ++ WM+ K Y+ ++ Y+ A + K +N + E AK N Y
Sbjct: 84 KFNHVSQLFLWMQENKKLDVYS-YSHYIKFMANKLDASTMLKLYNDIQVESAKDNVYVCN 142
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL--STMYLRLGQPEKVRPLVNQMK 206
++L+C K+ + + LF +M + + V ++ L + ++ G P K L+ +++
Sbjct: 143 SVLSCLIKKGKFDTTMKLFRQMKHDGLVPDLVTYSTLIAGCVKVKDGYP-KALELIQELQ 201
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
+ +D++ Y + + + E F +M +E + YS+L + Y F
Sbjct: 202 DNKLRMDDVIYGAILAVCASNGKWEEAEYYFNQMKSEGRSPNVYH-YSSLLNAYSACGDF 260
Query: 267 EKAELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVL 324
KA+ ++ +E E ++ L+ +Y + + L+S + Y VL
Sbjct: 261 TKADALIQDMESEGLAPNKVILTTLLKVYVRGGLFEKSRELLAKLESLGYAEDEMPYCVL 320
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ LAK K F+E + D +II A+ + +++EA
Sbjct: 321 MDGLAKARQTHEAKIIFDEMMKKHVMSDGYAHSIIISAFCRAKLFQEA 368
>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
Length = 691
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--- 139
+RS G ++ ++++ + M+ + S F L + K A F+ +
Sbjct: 145 IRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYG 204
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNT-VAFNNLSTMYLRLGQPEKV 198
+ YT+ L+N +CK M + A +F+ M+ G +A N LS M L + V
Sbjct: 205 VTPDSYTFNTLINGFCKNSMVDEAFRIFKDME---LAGKVKIAHNVLSGM---LKKATDV 258
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
P V ++Y ++ Y +ID VF++M + K TY+ L
Sbjct: 259 HPNV------------VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGL-KPNAVTYNTLIK 305
Query: 259 IYVKAELFEKAELAL----KKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKST 313
+A +++ + L P D ++ LI +C+ +LDA +V+ +L
Sbjct: 306 GLSEAHRYDEIKDILIGGNDAFTTFAP-DACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 364
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
P + SY VL++ L N D + F E
Sbjct: 365 LHPDSASYSVLIRTLCMRNEFDRAETLFNE 394
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 163/417 (39%), Gaps = 49/417 (11%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF-------N 135
+++LR L +W+ ++ F + L+ + + A + N
Sbjct: 72 LQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSN 131
Query: 136 GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
G + ++RY + +L+ Y + + ++ LF+ M ++ + + FN+L ++ L+ G+
Sbjct: 132 GCVKL-QDRY-FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRT 189
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
L ++M++ TY V SY+ I+G C+ +
Sbjct: 190 GMAHDLFDEMRR--------TYGVTPDSYTFNTLINGF--------------CKNSMVDE 227
Query: 256 LASIYVKAELFEKAELA-------LKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVW 307
I+ EL K ++A LKK ++ P + +Y L+ YC +D AV
Sbjct: 228 AFRIFKDMELAGKVKIAHNVLSGMLKKATDVHP-NVVSYTTLVRGYCMKQEIDEAVLVFH 286
Query: 308 GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSY--DMRLADVIIRAYLQ 365
+L P +Y L++ L++ + D +K +++ D +++I+A+
Sbjct: 287 DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD 346
Query: 366 KDMYEEAALIFN---NAKKRANASARFFKSRESFMIY-YLRSRQLDLALNEMEAALSEAK 421
+ A +F N K ++++ R M + R+ L L E E L + +
Sbjct: 347 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDE 406
Query: 422 QFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGK 478
+P+ + F + AE+ + L D +Y LI + GK
Sbjct: 407 ---CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGK 460
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY ALL CK + ALA+ ++M NT +N L + R G + L+ Q
Sbjct: 660 YTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQ 719
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M++ + D TY ++ + D+ + EM K TY+ L + + +A
Sbjct: 720 MRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEM-EAFGIKPNLKTYTTLINGWARAS 778
Query: 265 LFEKAELALK--KLEEMKPRDRKAYHFLIS 292
+ EKA + KL E+KP D+ AYH L++
Sbjct: 779 MPEKALSCFEEMKLAELKP-DKAAYHCLMT 807
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 109/241 (45%), Gaps = 7/241 (2%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGALLN 152
AL + M+ + + +++ + AK AA+ +F E + N TYG+++
Sbjct: 328 ALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIY 387
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
+C+ +RA AL +M+ ++ + Y +G EK + +++K+ S
Sbjct: 388 AHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSP 447
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
++Y + Y+ + + ++ +M K TYS L + ++K + + A
Sbjct: 448 SVISYGCLINLYTKIGKVSKALQI-SKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSV 506
Query: 273 LKKL--EEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALA 329
+ + +KP D Y+ +I+ +C SN+D A+ V + K + PT ++L ++ A
Sbjct: 507 FEDFTKDGLKP-DVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFA 565
Query: 330 K 330
+
Sbjct: 566 R 566
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 134/334 (40%), Gaps = 16/334 (4%)
Query: 58 GSVTGALN-AYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDF 114
G V+ AL + +M+ ++ +M Y + K + +A V E + D
Sbjct: 463 GKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLK---PDV 519
Query: 115 AVYLDLTAKTNGIAAAEKYFNGLSEYAKNRY-----TYGALLNCYCKELMTERALALFEK 169
+Y ++ G++ ++ + + K RY T+ +++ + + RAL +F+
Sbjct: 520 VLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDM 579
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M + +N L + + K +++QM + + TY MQ Y+ L D
Sbjct: 580 MRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGD 639
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK--PRDRKAY 287
+ + F + NE + + TY L K+ + A LA+ K K PR+ Y
Sbjct: 640 TEKAFQYFSVLRNEGLEIDVY-TYEALLKSCCKSGRMQSA-LAVTKEMSAKNIPRNTFVY 697
Query: 288 HFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
+ LI + ++ +A + + + K P +Y + A K + + +E E+
Sbjct: 698 NILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEA 757
Query: 347 RCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
+++ +I + + M E+A F K
Sbjct: 758 FGIKPNLKTYTTLINGWARASMPEKALSCFEEMK 791
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 65/345 (18%), Positives = 131/345 (37%), Gaps = 20/345 (5%)
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
R YG ++ Y + A FE M ++ +++L Y E+ V
Sbjct: 274 RKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVR 333
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+MK+ I + +TY + + ++ + D + F E E TY ++ + +
Sbjct: 334 KMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKE-AKEKLPSLNAVTYGSIIYAHCQT 392
Query: 264 ELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNT 319
++AE ++++E P D YH ++ Y N + V+ LK F P+
Sbjct: 393 CNMDRAEALVREMEVQGIDAPID--IYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVI 450
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
SY L+ K+ + Q + + ++M+ ++I +L+ + A +F +
Sbjct: 451 SYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDF 510
Query: 380 KKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFH---WRPMQVTVDTFF 436
K + ++ Y ++ M+ A+ KQ +RP T
Sbjct: 511 TK---------DGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPII 561
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNCLD-FSAYSLLIKTYIAAGKLA 480
F ++ A E +++ C+ Y+ LI + K+A
Sbjct: 562 HGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMA 606
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 2/146 (1%)
Query: 80 EYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
E ++S K GR + AL V + M ++ + + + + +D A+ + A + +
Sbjct: 663 EALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRK 722
Query: 140 YA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
+ +TY + +N CK ++A + ++M+ N + L + R PEK
Sbjct: 723 EGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEK 782
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQS 223
+MK + D Y M S
Sbjct: 783 ALSCFEEMKLAELKPDKAAYHCLMTS 808
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N + Y L++ YC+E A +F+KM ++ L + +N+L ++G+ E+
Sbjct: 361 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 420
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
QM++R + + TY + Y D++ E++ M + K Y +L Y K
Sbjct: 421 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL-KPNDVIYIDLLESYFK 479
Query: 263 AELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTS 320
++ EK K L++ D + Y LI ++ N++A RV I K+ P
Sbjct: 480 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHV 539
Query: 321 YLVLLQALAK 330
Y L+ L K
Sbjct: 540 YSSLISGLCK 549
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M G + D+ Y + + K + A +V+ M R + + V + ++
Sbjct: 108 MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A + + +Y + +TYGAL+N CK + A AL ++M + N V + N
Sbjct: 168 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 227
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
L ++R G ++ ++ +M + + +TY ++ + +D + +M +
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 286
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 139/365 (38%), Gaps = 44/365 (12%)
Query: 52 ALGATGGSVTGALNAYIMEG--KTVRKDMLEYCVRSLRKFGRYRHAL------------- 96
ALG+ GSV+ + +++G K+ R D + + + G +AL
Sbjct: 121 ALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQK 180
Query: 97 ------EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYG 148
E++E ME+ + + + + +D + I+ E FN + + + Y Y
Sbjct: 181 DDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYT 240
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
A++N YC+ RA + ++ N + L + ++GQ E L+ M+ +
Sbjct: 241 AVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQ 300
Query: 209 NISLDNLTYIVWMQSYSHLNDID------------GVERVFYEMCNECEDKCR------W 250
+ L+ + + + Y +D GVE Y CR +
Sbjct: 301 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNY 360
Query: 251 TTYSNLASIYVK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGI 309
TY+ L SI+ K ++ E L + E+ Y +I Y + R
Sbjct: 361 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKE 420
Query: 310 L-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDM 368
+ K F P +Y L+ +D+ + FEE + R + ++ +I L K+
Sbjct: 421 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG-LAKEG 479
Query: 369 YEEAA 373
EAA
Sbjct: 480 RSEAA 484
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 126/320 (39%), Gaps = 12/320 (3%)
Query: 71 GKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA 130
G V + +R + GR AL +++ M+S +H + V +D K + A
Sbjct: 228 GYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMA 287
Query: 131 EKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
K+F+ + + + TY +++ CK + A+ +FE+M++ + + A+N +
Sbjct: 288 WKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMG 347
Query: 189 YLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC 248
Y G+ ++ L+ + K R + Y + + R F EM +
Sbjct: 348 YGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAP-- 405
Query: 249 RWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVN 304
+TY+ L + KA + E A K + MK + + +I C LD
Sbjct: 406 NLSTYNVLIDMLCKA---GEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEAC 462
Query: 305 RVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
++ G+ P ++ L+ L K +D + +E+ + + +I+++
Sbjct: 463 SIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSF 522
Query: 364 LQKDMYEEAALIFNNAKKRA 383
+ E+ IF R
Sbjct: 523 FKCGRKEDGHKIFKEMIHRG 542
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 127/337 (37%), Gaps = 57/337 (16%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
L K GR AL E M+ + + + + V +D+ K + AA K + + E N
Sbjct: 383 LGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPN 441
Query: 144 RYTYGALLNCYCKELMTERALALFEKM-------DELKF--------------------- 175
T +++ CK + A ++FE M DE+ F
Sbjct: 442 VMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYE 501
Query: 176 -------LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLN 228
+ N V + +L + + G+ E + +M R S D +M
Sbjct: 502 QMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAG 561
Query: 229 DIDGVERVFYEMCNECEDKCRW-----TTYSNLASIYVKAELF-EKAELALKKLEEMKPR 282
+ G R +E E K R +YS L VKA E EL E+
Sbjct: 562 ET-GKGRALFE-----EIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVL 615
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWGILK----STFPPTNTSYLVLLQALAKLNAIDILK 338
D AY+ I +C + VN+ + +L+ PT +Y ++ LAK++ +D
Sbjct: 616 DTHAYNTFIDGFCKSGK---VNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAY 672
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
FEE +S ++ + +I + + +EA LI
Sbjct: 673 MLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLI 709
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 91/243 (37%), Gaps = 3/243 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ + Y ++ +CK +A L E+M V + ++ ++ + ++ L
Sbjct: 616 DTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLF 675
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ K + L+ + Y + + + ID + E+ + +T ++ L VK
Sbjct: 676 EEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT-WNCLLDALVK 734
Query: 263 AELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTS 320
AE +A + + ++ +K + Y LI+ C + W + K P +
Sbjct: 735 AEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTIT 794
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y ++ LAK I FE +++ D + II EA IF +
Sbjct: 795 YTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETR 854
Query: 381 KRA 383
+
Sbjct: 855 MKG 857
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 135/306 (44%), Gaps = 11/306 (3%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
V +L + GR AL+V + M+ + + + + K + A + FN ++ +
Sbjct: 353 VDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGP 412
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N YT+ +N + K + +AL +E M + + VA N + + G+ +
Sbjct: 413 TPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKR 472
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS--NLAS 258
+ +++K IS DN+TY + ++ S ++ D ++F EM E++C + +L
Sbjct: 473 VFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEM---IENRCAPDVLAMNSLID 529
Query: 259 IYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPP 316
+ KA +A +L+EM +P D L L + + + G+ ++FPP
Sbjct: 530 MLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPP 589
Query: 317 TNTSYLVLLQALAKLNAID-ILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
+Y +L L K ++ L + + C D+ + ++ +++D +EA +
Sbjct: 590 NIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMP-DLSSYNTVMYGLVKEDRLDEAFWM 648
Query: 376 FNNAKK 381
F KK
Sbjct: 649 FCQMKK 654
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGI-AAAEKYFNGLSE-YAK 142
++ K R L++ E M ++ +Y + + K+ + A Y+ +SE ++
Sbjct: 810 AMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSP 869
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
TYG LL+ K+ E A ALF++M E N +N L Y G EKV L
Sbjct: 870 TPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELF 929
Query: 203 NQMKQRNISLDNLTYIVWMQSY---SHLND 229
M ++ ++ D +Y V + + LND
Sbjct: 930 ESMVEQGMNPDIKSYTVVIDTLCADGRLND 959
>gi|125583699|gb|EAZ24630.1| hypothetical protein OsJ_08397 [Oryza sativa Japonica Group]
Length = 482
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 10/220 (4%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAK---NRYTYGALLNCYCKELMTERALALFEKM 170
+L K+ +A A YF + + N TY LL + + T++ LF+ +
Sbjct: 150 IGTHLHSRDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDL 209
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
DE + +N + Y + G ++ ++ +MK D +T+ + + SY
Sbjct: 210 DESPVSPDIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAF 269
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYH 288
D +E+VF + E K T++++ + Y KA L EKAE L K+ EM KP +
Sbjct: 270 DKMEQVFKSLLRSKE-KPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKP-NYVTQE 327
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQAL 328
LI +Y + D V+R I N +L + A+
Sbjct: 328 CLIMMY---AYCDCVSRARQIFDELVSSQNNVHLSSVNAM 364
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 38/270 (14%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY L+N + E A +FE MD K + +TV +N + Y + G+ +K
Sbjct: 219 YTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD 278
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM------------------------ 240
M+ +N+ D +TY+ +Q+ D D ++ EM
Sbjct: 279 MEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRK 338
Query: 241 CNEC--------EDKCRWTT--YSNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYH 288
C E + CR Y+ L Y K E+A +++ E +P D Y
Sbjct: 339 CMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEP-DAVTYS 397
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTNTS-YLVLLQALAKLNAIDILKQCFEEWESR 347
L++ C + LD ++ ++ N Y L+ L K I+ + FEE +
Sbjct: 398 VLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEK 457
Query: 348 CSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+ D + II A + ++A +F
Sbjct: 458 GCARDSYCYNAIIDALAKHGKIDQALALFG 487
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 106/269 (39%), Gaps = 13/269 (4%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME K V+ D + Y +++ + L + ME R + +++ + K
Sbjct: 279 MEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRK 338
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
A F +++ N Y AL++ Y K E A+ LFE+M F + V ++
Sbjct: 339 CMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSV 398
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + G+ + L + + + ++++ + Y + I+ E +F EM
Sbjct: 399 LVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEM---S 455
Query: 245 EDKCRWTTYSNLASI--YVKAELFEKAELALKKLEEMKPRDRKAYHFLI---SLYCNTSN 299
E C +Y A I K ++A ++EE + D+ Y F I L+ N
Sbjct: 456 EKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEE-EGCDQTVYTFTILIDGLFKEHKN 514
Query: 300 LDAVNRVWGILKSTFPPTNTSYLVLLQAL 328
+A+ ++ PT S+ L L
Sbjct: 515 EEAIKFWDKMIDKGITPTVASFRALAIGL 543
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 116/312 (37%), Gaps = 43/312 (13%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
VT LN I + V +L K G+ A +V++ M R + + + +D
Sbjct: 263 VTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD 322
Query: 120 LTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+ + A K F+ + + YA N +Y L+N YCK ++A LFE+M + + +
Sbjct: 323 GHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 382
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
NTV +N L H+ + +F
Sbjct: 383 NTVTYNTL------------------------------------MHXCHVGRLQDAIALF 406
Query: 238 YEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYC 295
+EM + TY L K ++A LK +E M P D + Y +I C
Sbjct: 407 HEMVAHGQIP-DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP-DIQIYTIVIDGMC 464
Query: 296 NTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMR 354
L+A ++ L S P +Y +++ L + +D + F E + S D
Sbjct: 465 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC 524
Query: 355 LADVIIRAYLQK 366
+ I + LQ
Sbjct: 525 TYNTITQGLLQN 536
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 92/209 (44%), Gaps = 7/209 (3%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N TYG L+N CK T A+ L M++ + V + ++ + Q +
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLA 257
L ++M + IS D TY + S +L + V + +M N D ++T +
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD-- 287
Query: 258 SIYVKAELFEKAELA-LKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFP 315
++ + ++ E ++ + + ++P + Y+ L+ +C S +D +V+ ++ + +
Sbjct: 288 ALCKEGKITEAHDVVDMMIIRGVEP-NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 346
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEW 344
P SY L+ K+ +D FEE
Sbjct: 347 PNVISYNTLINGYCKIQRMDKATYLFEEM 375
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 27/314 (8%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKM---HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
+ +L + GR ALE+ + M+ + + +SY +G A+++ + L
Sbjct: 377 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL---------ISGFLKADRFGDALEL 427
Query: 140 YA--------KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLR 191
+ N YT+ +N Y K + +A+ +E M + + VA N + +
Sbjct: 428 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 487
Query: 192 LGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRW 250
G+ + + +++K +S D +TY + ++ S + D ++FY+M N C
Sbjct: 488 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV-- 545
Query: 251 TTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWG 308
++L KA ++A +L+EM +P D L L + ++ +
Sbjct: 546 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 605
Query: 309 ILKSTFPPTNTSYLVLLQALAKLNAI-DILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
+ S +PP +Y +L L K A+ D L + C D+ + +I ++++
Sbjct: 606 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIP-DLSSYNTVIYGLVKEE 664
Query: 368 MYEEAALIFNNAKK 381
Y EA IF KK
Sbjct: 665 RYNEAFSIFCQMKK 678
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 122/314 (38%), Gaps = 42/314 (13%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME V+ ++ Y C+R L + R+ A ++ ME+ V + +
Sbjct: 256 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 315
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I+ A+ F + S+ +R TY LL+ + ++ + ++ M + N VA+
Sbjct: 316 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 375
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ ++G+ + + ++MKQ+ I + YS
Sbjct: 376 VIDALCQVGRVFEALEMFDEMKQKGIV---------PEQYS------------------- 407
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTS--NLDA 302
Y++L S ++KA+ F A K ++ P+ H L Y S ++ A
Sbjct: 408 --------YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKA 459
Query: 303 VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
+ R + P + +L LAK + + K+ F E ++ S D ++I+
Sbjct: 460 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKC 519
Query: 363 YLQKDMYEEAALIF 376
+ ++EA IF
Sbjct: 520 CSKASKFDEAVKIF 533
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 5/221 (2%)
Query: 136 GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
G ++ N +Y L+ YC + + A+ L M++ + V FN L + ++G+
Sbjct: 265 GTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKL 324
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
++ L +MK ++S +TY + + YS + + R+F EM + + K TY+
Sbjct: 325 QEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEM-SRFQVKADILTYNA 383
Query: 256 LASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKS 312
L K +KA +++L+E + P + + LI C + +++ ++KS
Sbjct: 384 LILGLCKEGKTKKAAYLVRELDEKGLVP-NASTFSALIYGQCVQKQSERAFQIYKSMIKS 442
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
+F P + ++ +LL + D Q EE +R + D+
Sbjct: 443 SFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDV 483
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 137/341 (40%), Gaps = 9/341 (2%)
Query: 41 GNEDKLYKRLSALGATGG--SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
GN LSA TG T AL+ + G Y + + + G+ + E
Sbjct: 668 GNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEF 727
Query: 99 IEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCK 156
+ + + + F V ++ + A + + E ++ + + ALL Y +
Sbjct: 728 YQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSR 787
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E + A L + + + + +N++ ++Y +LG K + M++ S D T
Sbjct: 788 ETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATT 847
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
+ + YS + + + EM + + +TY+ L S Y + + +E AEL K +
Sbjct: 848 FNTLIMLYSRNQMVQEAQALLREMI-KTGNAPNISTYTTLISAYGRLQAYEDAELVFKSI 906
Query: 277 EEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNA 333
E KP D AY+ +I++Y + V +K+ F P+ T+ +L+ + K A
Sbjct: 907 AETGCKP-DATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGA 965
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
++ E S D II ++L Y A +
Sbjct: 966 TGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVI 1006
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 130/295 (44%), Gaps = 15/295 (5%)
Query: 98 VIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKY--FNGLSEYAKNRYTYGALLNCYC 155
V E ++ K + TD + A T+ A E Y N YA N +L+
Sbjct: 32 VRETVDGWKEQLAPTDLCYVVKRVANTSWQRALELYECLNVARWYAPNPRMLAVMLSVLG 91
Query: 156 KELMTERALALFEKMDELKFLGNTV-AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
+ A LF++ + +GN V +N+L ++Y R G V+ L+ +M+ R D
Sbjct: 92 RANQPGLAQELFDRAE--SSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDL 149
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
+T+ + +++ + +G+ + + TY+ L S L + A+
Sbjct: 150 VTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLIS---ACSLNNRLSDAIL 206
Query: 275 KLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALA 329
EEM+ + D Y+ +IS+Y ++A + ++ I++ F P +Y +L A A
Sbjct: 207 IFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFA 266
Query: 330 KLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ I+ +++ ++RCSS ++ + +I Y + M+ +A ++ K+
Sbjct: 267 RDGRIEEVERIRGMMRDARCSSDEITY-NTMIHMYGKAGMHRKAEELYVQMKEEG 320
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 132/317 (41%), Gaps = 16/317 (5%)
Query: 69 MEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIA 128
M+ + ++ ++ YC + F H L +I+ + + F D A+++ + A +
Sbjct: 598 MDAEVLQTAVMCYCRKG---FAFVAHEL-LIDCLHA----FEVKDSAMHVAIIASYGKLK 649
Query: 129 A---AEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
AE F L +A N Y ALL+ Y + ERA + M N N
Sbjct: 650 LWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACAN 709
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+ + R G+ +++ ++ + I+ ++ T++V ++S +++ R Y E
Sbjct: 710 YVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEA-RSMYRQMRE 768
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDA 302
+ L ++Y + + AE +K +++ D Y+ +ISLY +
Sbjct: 769 AGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRK 828
Query: 303 VNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
V+ G+ + P T++ L+ ++ + + E ++ ++ +I
Sbjct: 829 AALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLIS 888
Query: 362 AYLQKDMYEEAALIFNN 378
AY + YE+A L+F +
Sbjct: 889 AYGRLQAYEDAELVFKS 905
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 105/234 (44%), Gaps = 5/234 (2%)
Query: 146 TYGALLN-CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY L++ C +++ A+ +FE+M + +N + ++Y R G+ E +
Sbjct: 187 TYNTLISACSLNNRLSD-AILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRI 245
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M+++ + D +TY + +++ I+ VER+ M + TY+ + +Y KA
Sbjct: 246 MQEQGFTPDAVTYNSVLHAFARDGRIEEVERI-RGMMRDARCSSDEITYNTMIHMYGKAG 304
Query: 265 LFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYL 322
+ KA EL ++ EE + D + LI ++ ++ +LKS PT ++
Sbjct: 305 MHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFS 364
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
++ A AK + + + D+ V++ + + +M E+ +++
Sbjct: 365 AMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILY 418
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 7/243 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+R +G ++ Y K A A FE M N F +L Y G V
Sbjct: 250 SRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCV 309
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+MK I + +TY + + Y ND + +F E + D YSN+ + +
Sbjct: 310 EEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKL-DNLNGIIYSNIIHAHCQ 368
Query: 263 AELFEKAELALKKLEEMK---PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
+ ++AE ++++EE P D YH ++ Y + V+ LK F PT
Sbjct: 369 SGNMDRAEELVREMEEDGIDAPID--VYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTI 426
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
SY L+ K+ + +E ES ++ + ++I ++ + A IF +
Sbjct: 427 ISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFED 486
Query: 379 AKK 381
K
Sbjct: 487 MIK 489
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/333 (17%), Positives = 126/333 (37%), Gaps = 87/333 (26%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN--RYTY 147
G R AL +E M+S + + +++ + KTN +A+ F N Y
Sbjct: 300 GDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIY 359
Query: 148 GALLNCYCKELMTERA-----------------------------------LALFEKMDE 172
+++ +C+ +RA L +FE++ E
Sbjct: 360 SNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKE 419
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
F +++ L +Y+++G+ K + +M+ I +N TY + + + HL+D
Sbjct: 420 CGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFAN 479
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLIS 292
+F +M +K+ L +P DR Y+ L+
Sbjct: 480 AFSIFEDM--------------------IKSGL--------------QP-DRAIYNLLVE 504
Query: 293 LYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALA-------KLNAIDILKQCFEEW 344
+C N+D R++ + K P+N ++ +++ A + +D++++
Sbjct: 505 AFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRR----- 559
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
S C+ M + +I ++K E+A + +
Sbjct: 560 -SGCAPTVMTY-NALIHGLVRKHQVEKAVSVLD 590
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 10/216 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L + + A+ V++ M + + + + + A + I A +YF + E
Sbjct: 573 IHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 632
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ Y Y LL CK + ALA+ +M K NT +N L + R G +
Sbjct: 633 KLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAAD 692
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L+ QMK+ I + T+ ++ + D+ E V EM + K T++ L +
Sbjct: 693 LLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMAD-VGLKPNVKTFTTLIKGW 751
Query: 261 VKAELFEKAELALKKLEEMKP----RDRKAYHFLIS 292
+ L ++ ALK EEMK D AYH L++
Sbjct: 752 ARVSLPDR---ALKCFEEMKSAGLKPDEAAYHCLVT 784
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 109/273 (39%), Gaps = 15/273 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA---EKYFNGL-- 137
V + K G A+ + E M+ +M S F ++ G A A ++ F+ L
Sbjct: 503 VEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIE------GFAVAGDMKRAFDTLDL 556
Query: 138 ---SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
S A TY AL++ ++ E+A+++ +KM N + + Y G
Sbjct: 557 MRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGD 616
Query: 195 PEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYS 254
K ++K+ + LD Y +++ + V EM + + +
Sbjct: 617 IGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNI 676
Query: 255 NLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKST 313
+ + +++E A+L + E+ P + + I+ C ++ A N + +
Sbjct: 677 LIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVG 736
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
P ++ L++ A+++ D +CFEE +S
Sbjct: 737 LKPNVKTFTTLIKGWARVSLPDRALKCFEEMKS 769
>gi|125541147|gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indica Group]
Length = 482
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 10/220 (4%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAK---NRYTYGALLNCYCKELMTERALALFEKM 170
+L K+ +A A YF + + N TY LL + + T++ LF+ +
Sbjct: 150 IGAHLHSRDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDL 209
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDI 230
DE + +N + Y + G ++ ++ +MK D +T+ + + SY
Sbjct: 210 DESPVSPDIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAF 269
Query: 231 DGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYH 288
D +E+VF + E K T++++ + Y KA L EKAE L K+ EM KP +
Sbjct: 270 DKMEQVFKSLLRSKE-KPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKP-NYVTQE 327
Query: 289 FLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQAL 328
LI +Y + D V+R I N +L + A+
Sbjct: 328 CLIMMY---AYCDCVSRARQIFDELVSSQNNVHLSSVNAM 364
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 121/313 (38%), Gaps = 49/313 (15%)
Query: 62 GALNAYIMEGKTVRKDMLE--YCVRSLRKFGR---YRHALEVIEWMESRKMHFSYTDFAV 116
GA+ I E + +++E V +R+F + A+EV++ M + F
Sbjct: 148 GAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGC 207
Query: 117 YLDLTAKTNGIAAAEKYFNGLSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
LD K + A K F + E + N + +LL +C+E A + +M E
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGL 267
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND-IDGVE 234
+ V F NL + Y G+ L+N M++R + Y V +Q+ +D
Sbjct: 268 EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAM 327
Query: 235 RVFYEMCN-ECEDK-----------CRW----------------------TTYSNLASIY 260
RVF EM CE C+W TY + +
Sbjct: 328 RVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH 387
Query: 261 VKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKST-FP 315
K E FE+ L+ +E+MK R D Y+ +I L C + R+W +++
Sbjct: 388 EKKEQFEE---CLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLS 444
Query: 316 PTNTSYLVLLQAL 328
P ++++++
Sbjct: 445 PGVDTFVIMINGF 457
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 117/273 (42%), Gaps = 8/273 (2%)
Query: 59 SVTGALNAYI-MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
+V+GA+ + M+ + +R +++ Y + L G+ A+ + + M S + +
Sbjct: 243 NVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHN 302
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDEL 173
V ++ K + A FN + + N TY L++ YCK+ E A AL+ M +
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDR 362
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
+N L R G + R L+N+M + +S D +TY + + S +
Sbjct: 363 GIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKA 422
Query: 234 ERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLE-EMKPRDRKAYHFLIS 292
++ EM + + TY+ L Y + A + ++E + K + ++ LI
Sbjct: 423 VKLLDEMFEKGLNPSH-VTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIK 481
Query: 293 LYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVL 324
+C L+ N + +L+ P T+Y ++
Sbjct: 482 GFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 110/275 (40%), Gaps = 18/275 (6%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
V L K G+ A +VIE M+ + + + +D K I K L E
Sbjct: 162 VNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVA 221
Query: 142 ----KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
N TY L++ +CK+ A+ +F +M N V +N L G+ ++
Sbjct: 222 KGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDE 281
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
L +QM ++ + +T+ V + + ++ +F +M + D TY+ L
Sbjct: 282 AVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDP-NAMTYTTLI 340
Query: 258 SIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWG-ILKS 312
Y K E A AL + M R + Y+ LI+ C ++ A + ++
Sbjct: 341 DAYCKDGRMEDA-FALYNM--MIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397
Query: 313 TFPPTNTSYLVLLQALAKLN----AIDILKQCFEE 343
+Y +L+ +L K A+ +L + FE+
Sbjct: 398 KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEK 432
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 127/300 (42%), Gaps = 14/300 (4%)
Query: 55 ATGGSVTGALNAY-IMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSY 111
A GG T A + M ++ D++ Y V + K GR AL V+E +E+ ++ +
Sbjct: 336 ARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTI 395
Query: 112 TDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEK 169
+ LD K I A + F+ + +Y +LL+ K E A + +
Sbjct: 396 ETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNE 455
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
M + + + L+ Y R G EK + +MK+ N+++D + Y +++ +
Sbjct: 456 MLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGA 515
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAY 287
+ G VF ++ + + T + L Y +A E+AE + +E KP D Y
Sbjct: 516 MHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKP-DTLIY 574
Query: 288 HFLISLYCNTSNLDAVNRVWGIL-----KSTFPPTNTSYLVLLQALAKLNAIDILKQCFE 342
+ LI+ Y + + + + + K T P T Y L+Q A+ I ++ F+
Sbjct: 575 NSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGT-YNTLIQVYAQAGFIPRAEELFQ 633
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 88/233 (37%), Gaps = 40/233 (17%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKT---------------NGIAAAEK 132
K G + ALEV + +++ + + L AK NG+ +E+
Sbjct: 407 KGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSER 466
Query: 133 YFNGLSE-YAK---------------------NRYTYGALLNCYCKELMTERALALFEKM 170
+ L+E YA+ + YGALL C A +F+++
Sbjct: 467 IYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQI 526
Query: 171 DELKFLGNTVAF-NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
+ N + + L Y R G+ E+ LV+ M++ D L Y + +Y
Sbjct: 527 TDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGR 586
Query: 230 IDGVERVFYEMCNEC--EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
+ +E + +M + K TY+ L +Y +A +AE + L +K
Sbjct: 587 HEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLK 639
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 129/347 (37%), Gaps = 40/347 (11%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N + ++++ Y E A FEK + + +N++ Y + G E V L+
Sbjct: 200 NEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALL 259
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
QM++ + Y + ++ + D E+KC S + V
Sbjct: 260 AQMEEEGFQGNLGLYTTVLNGFAEIRD---------------EEKC----LSFFHRLKVS 300
Query: 263 AELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPT 317
+ A+ AL LEEM ++ Y ++ Y + A +VW ++ + P
Sbjct: 301 PQAGNMAK-ALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPD 359
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
Y +L+ A K +D E E+ + I+ Y++ ++A +F+
Sbjct: 360 IVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFD 419
Query: 378 NAKKRANASAR-FFKSRESFMIYYLRSRQLD---LALNEMEAALSEAKQFHWRPMQVTVD 433
K A R S S + ++RQ++ L LNEM A P +
Sbjct: 420 RIK---TAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLAN-------GVVPSERIYT 469
Query: 434 TFFRFFEEEKDVDGAEEFCKVLKSLN-CLDFSAYSLLIKTYIAAGKL 479
+ DV+ A + +K N +D AY L+K +G +
Sbjct: 470 ALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAM 516
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 132/344 (38%), Gaps = 16/344 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N +T+ +++ CKE A ALF +M + + V +N+L Y + G E+V LV
Sbjct: 199 NVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLV 258
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++M++ + D +TY + +S ++ F EM + T+S + K
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQ-GVVANVVTFSTFVDAFCK 317
Query: 263 AELFEKAELALKKLEEMKPRDRKAYHF----LISLYCNTSNL-DAVNRVWGILKSTFPPT 317
L ++ A+K +M+ R F L+ C L DA+ + ++ P
Sbjct: 318 EGLVQE---AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y V++ L K + E + L +I + + E A + N
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLN 434
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFF- 436
K N S +I+ L Q ++E ++ L + RP V T
Sbjct: 435 QMK---NKGMELDVSLYGTLIWGLCKDQ---KVDEAKSLLHKMAGCGLRPNTVIYTTIMD 488
Query: 437 RFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLA 480
F+ K+ + K+L S + Y LI AG ++
Sbjct: 489 ALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSIS 532
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 78/214 (36%), Gaps = 36/214 (16%)
Query: 138 SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
S + N TY AL++ CK A++ F KM EL N A+ L + ++G K
Sbjct: 509 SGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNK 568
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
L+N+M + +SLD + Y + Y
Sbjct: 569 AMHLMNEMIDKGMSLDKVVYTSLIDGYMK------------------------------- 597
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPP 316
+A L + L K +E D Y IS +CN + + V ++ + P
Sbjct: 598 ----QANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITP 653
Query: 317 TNTSYLVLLQALAKLNAIDILKQCFEEWESRCSS 350
T Y L++ KL ++ E ES SS
Sbjct: 654 DKTVYNCLIRKYQKLGNMEEASSLQNEMESVLSS 687
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 121/312 (38%), Gaps = 49/312 (15%)
Query: 62 GALNAYIMEGKTVRKDMLE--YCVRSLRKFGR---YRHALEVIEWMESRKMHFSYTDFAV 116
GA+ I E + +++E V +R+F + A+EV++ M + F
Sbjct: 148 GAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGC 207
Query: 117 YLDLTAKTNGIAAAEKYFNGLSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKF 175
LD K + A K F + E + N + +LL +C+E A + +M E
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGL 267
Query: 176 LGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND-IDGVE 234
+ V F NL + Y G+ L+N M++R + Y V +Q+ +D
Sbjct: 268 EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAM 327
Query: 235 RVFYEMCN-ECEDK-----------CRW----------------------TTYSNLASIY 260
RVF EM CE C+W TY + +
Sbjct: 328 RVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH 387
Query: 261 VKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKST-FP 315
K E FE+ L+ +E+MK R D Y+ +I L C + R+W +++
Sbjct: 388 EKKEQFEE---CLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLS 444
Query: 316 PTNTSYLVLLQA 327
P ++++++
Sbjct: 445 PGVDTFVIMING 456
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 113/288 (39%), Gaps = 17/288 (5%)
Query: 98 VIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK--NRYTYGALLNCYC 155
+++ + M F ++ + + + YFN + + N +Y +++C+C
Sbjct: 414 ILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFC 473
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
K M ++A F++M N V FN L Y + G+ K R L+ + + D
Sbjct: 474 KTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIF 533
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN-------LASIYVKAELFEK 268
T+ + I+ F EM W N + S+ + ++
Sbjct: 534 TFSSIIDGLCRAKQIEDALGCFSEM-------VMWGLSPNAVTYNILIHSLCIIGDVPRS 586
Query: 269 AELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQA 327
+L K + D +++ LI +C ++ +++ +L P N +Y+ ++
Sbjct: 587 MKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKV 646
Query: 328 LAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
+ + K+ F E+ D ++I+ A +++D +E A I
Sbjct: 647 FCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKI 694
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 117/260 (45%), Gaps = 13/260 (5%)
Query: 88 KFGR-YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNR 144
K GR + LE+++ M S+ + F + + + A ++F+ L + Y
Sbjct: 284 KMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGT 343
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY ++L + K + AL + ++M++ + + +N L Y+R G ++ +++
Sbjct: 344 ATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDT 403
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M + + + +TY + +Y D D VF +M E TY+N+ + K
Sbjct: 404 MASKGVMPNAITYTTVINAYGKAGDADKALEVFGQM-KELGCVPNVCTYNNVLVLLGKR- 461
Query: 265 LFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNT 319
++E +K L +MK P DR ++ ++++ V++V +K+ F P
Sbjct: 462 --SRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKE 519
Query: 320 SYLVLLQALAKLNA-IDILK 338
++ L+ A + + +D+ K
Sbjct: 520 TFNTLISAYGRCGSEVDVAK 539
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 130/300 (43%), Gaps = 20/300 (6%)
Query: 60 VTGALNAYIMEGKTVRKDMLEYCVRSLRKF----GRYRHALEVIEWM------ESRKMHF 109
V +LN I +V+ ++LE + L K G + A + EW+ E+ K+
Sbjct: 143 VGSSLNDLIEFFNSVKGELLESDITGLLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDD 202
Query: 110 SYTDFAVYLDLTAKTNGIAAAEKYFN--GLSEYAKNRYTYGALLNCYCKELMTERALALF 167
+F V + + + + A K F+ + EY+ + +L+ Y + +RA+ +F
Sbjct: 203 QSVEFMV--KMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIF 260
Query: 168 EKMDELKFLGNTVAFNNLSTMYLRLGQP-EKVRPLVNQMKQRNISLDNLTYIVWMQSYSH 226
EKM E V +N + +Y ++G+ + L+++M+ + + D T + +
Sbjct: 261 EKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGR 320
Query: 227 LNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDR 284
+D R F++ K TY+++ ++ KA ++ +A LK++E+ +P D
Sbjct: 321 EGILDEARR-FFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEP-DA 378
Query: 285 KAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
Y+ L++ Y D V + S P +Y ++ A K D + F +
Sbjct: 379 ITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQ 438
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 163/423 (38%), Gaps = 54/423 (12%)
Query: 88 KFGRYRHALEVIEWMESRKMH---FSYTDF-AVYLDLTAKTNGIAAAEKYFNGLSEYAKN 143
K G Y AL +++ ME +Y + A Y+ G A + + N
Sbjct: 355 KAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMAS--KGVMPN 412
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY ++N Y K ++AL +F +M EL + N +NN+ + + + E + ++
Sbjct: 413 AITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILC 472
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
MK D +T+ + V +V EM N C + T++ L S Y +
Sbjct: 473 DMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKN-CGFEPDKETFNTLISAYGRC 531
Query: 264 ELFEKAELALKKL-EEMKPRD----RKAYHFLISLYCNTSNLDAVNRV-WGILKSTFPPT 317
+E+ + K+ EM Y+ L++ N A V + K F P
Sbjct: 532 ----GSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPN 587
Query: 318 NTSYLVLLQALAKLNAIDILKQ---------CFEEW----ESRCSSYDMRLADVIIRAY- 363
TSY +LL +K + L++ F W ++Y R + RA+
Sbjct: 588 ETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFH 647
Query: 364 -LQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQ 422
LQ + Y+ ++ N S + ++R+++L+ A ++ Q
Sbjct: 648 QLQNNGYKLDMVVIN-----------------SMLSMFVRNQKLEKAHEMLDVIHVSGLQ 690
Query: 423 FHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKLAS 481
P VT ++ + D AEE K +++ D +Y+ +IK + G +
Sbjct: 691 ----PNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQE 746
Query: 482 DMR 484
+R
Sbjct: 747 AIR 749
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 27/314 (8%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKM---HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE 139
+ +L + GR ALE+ + M+ + + +SY +G A+++ + L
Sbjct: 342 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL---------ISGFLKADRFGDALEL 392
Query: 140 YA--------KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLR 191
+ N YT+ +N Y K + +A+ +E M + + VA N + +
Sbjct: 393 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 452
Query: 192 LGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRW 250
G+ + + +++K +S D +TY + ++ S + D ++FY+M N C
Sbjct: 453 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV-- 510
Query: 251 TTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWG 308
++L KA ++A +L+EM +P D L L + ++ +
Sbjct: 511 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 570
Query: 309 ILKSTFPPTNTSYLVLLQALAKLNAI-DILKQCFEEWESRCSSYDMRLADVIIRAYLQKD 367
+ S +PP +Y +L L K A+ D L + C D+ + +I ++++
Sbjct: 571 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIP-DLSSYNTVIYGLVKEE 629
Query: 368 MYEEAALIFNNAKK 381
Y EA IF KK
Sbjct: 630 RYNEAFSIFCQMKK 643
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 122/314 (38%), Gaps = 42/314 (13%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME V+ ++ Y C+R L + R+ A ++ ME+ V + +
Sbjct: 221 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 280
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I+ A+ F + S+ +R TY LL+ + ++ + ++ M + N VA+
Sbjct: 281 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 340
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ ++G+ + + ++MKQ+ I + YS
Sbjct: 341 VIDALCQVGRVFEALEMFDEMKQKGI---------VPEQYS------------------- 372
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTS--NLDA 302
Y++L S ++KA+ F A K ++ P+ H L Y S ++ A
Sbjct: 373 --------YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKA 424
Query: 303 VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
+ R + P + +L LAK + + K+ F E ++ S D ++I+
Sbjct: 425 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKC 484
Query: 363 YLQKDMYEEAALIF 376
+ ++EA IF
Sbjct: 485 CSKASKFDEAVKIF 498
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 7/228 (3%)
Query: 125 NGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
N I AE F + E + +TY LL+ K + E L + E+M + V +
Sbjct: 769 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 828
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N + + ++ + E+ L + + S TY + I+ E +F EM
Sbjct: 829 NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 888
Query: 243 -ECEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNL 300
C+ C T Y+ L + + A EK L +++ D K+Y +I C L
Sbjct: 889 YGCKANC--TIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 946
Query: 301 -DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
D + +L+ P +Y +L+ L K ++ F E + +
Sbjct: 947 NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 994
>gi|255661130|gb|ACU25734.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 132/302 (43%), Gaps = 7/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + AL ++ ME ++ ++ ++L+ K + A F+ L S + +
Sbjct: 21 KEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 80
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y A++N + K + A +L +M NT +++ L TMY+ + + + +M
Sbjct: 81 AYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEM 140
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ LD T + + Y L +++F+ M + + +Y+ L +Y AEL
Sbjct: 141 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM-RKMGIEPNVVSYNTLLRVYGDAEL 199
Query: 266 FEKAELALKKLEEMKPRDRKA--YHFLISLYCNT-SNLDAVNRVWGILKSTFPPTNTSYL 322
F +A + L +L + K D+ Y+ ++ +Y T ++ A N + + P + +Y
Sbjct: 200 FGEA-IHLFRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANNLIQEMQNRGIEPNSITYS 258
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ K+ +D F++ S D L +I AY + + A + + K+
Sbjct: 259 TIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP 318
Query: 383 AN 384
N
Sbjct: 319 DN 320
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +RYTY L+ + KE + + AL+ +KM++ + G+ V ++NL + +L K
Sbjct: 6 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 65
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYS 254
+ +++K+ + D + +Y+ + ++ G ++F E + +E +YS
Sbjct: 66 IFSRLKRSGFTPD-------LVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYS 118
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKS 312
L ++YV+ + F +A ++ E+K D + +I +Y +++ WG+ K
Sbjct: 119 TLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 178
Query: 313 TFPPTNTSYLVLLQA 327
P SY LL+
Sbjct: 179 GIEPNVVSYNTLLRV 193
>gi|157867707|ref|XP_001682407.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125861|emb|CAJ03407.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 1002
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 38/228 (16%)
Query: 120 LTAKTNGIAA-AEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGN 178
L G AA E++ L ++ + Y LL+ Y K + ER A EKM N
Sbjct: 541 LAVHKGGTAADVEEFLKTLPAWSTD--VYNVLLHMYGKSMDRERFDATLEKMKSESVEMN 598
Query: 179 TVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFY 238
V F L T + R G+ +KV ++ +K + + Y V S S + + +GVE
Sbjct: 599 DVTFGTLITAFARWGERDKVNEVIQLLKSHDGGISATFYSVLASSLSRMGNQEGVE---- 654
Query: 239 EMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTS 298
N ED V + LF E+ Y+ +SLY +
Sbjct: 655 ---NAWED-------------LVASRLFPDTEV---------------YNQFLSLYSRQN 683
Query: 299 NLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
N+ + V + PP + +L L K + ++ FE+ +S
Sbjct: 684 NVSKMQGVLDSMMKQVPPNPVTATTVLDMLGKSGRMSEMESLFEDMKS 731
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 134/302 (44%), Gaps = 7/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + AL ++ ME ++ ++ ++L+ K + A F+ L S + +
Sbjct: 27 KEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKXCDYSKAISIFSRLKRSGFTPDLV 86
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y A++N + K + A +L +M + NT +++ L TMY+ + + + ++M
Sbjct: 87 AYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTMYVENKKFLEALSVFSEM 146
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ LD T + + Y L +++F+ M + + +Y+ L +Y AEL
Sbjct: 147 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM-RKMGIEPNVVSYNTLLRVYGDAEL 205
Query: 266 FEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYL 322
F +A + L +L + K ++ Y+ ++ +Y T + N + ++S P + +Y
Sbjct: 206 FGEA-IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 264
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ K+ +D F++ S D L +I AY + + A + + K+
Sbjct: 265 TIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP 324
Query: 383 AN 384
N
Sbjct: 325 DN 326
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +RYTY L+ + KE + + AL+ +KM++ + G+ V ++NL + + K
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKXCDYSKAIS 71
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYS 254
+ +++K+ + D + +Y+ + ++ G ++F E + E + +YS
Sbjct: 72 IFSRLKRSGFTPD-------LVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTASYS 124
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKS 312
L ++YV+ + F +A ++ E+K D + +I +Y +++ WG+ K
Sbjct: 125 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 184
Query: 313 TFPPTNTSYLVLLQA 327
P SY LL+
Sbjct: 185 GIEPNVVSYNTLLRV 199
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 114/274 (41%), Gaps = 7/274 (2%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLN 152
A+E+ E + + + ++ L+ K + AE+ +E + Y +N
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
YC+ +A+ E+M+ N++ FN+L + + + +K V +M ++ ++
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP 454
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
TY + Y L D ++ +M E K +Y +L + K +AE+
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQM-EEIGVKPNVVSYGSLINCLCKDGKILEAEIV 513
Query: 273 LKKL--EEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALA 329
L+ + + P + + Y+ LI C + DA+ +++S PT +Y VL+ L
Sbjct: 514 LRDMICRGVLP-NAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLC 572
Query: 330 KLNAIDILKQCFEEWESRCSSYDMRLADVIIRAY 363
K + + + S S D+ + +I Y
Sbjct: 573 KKGKLTEAEDFLTQITSSGHSPDVITYNSLISGY 606
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 115/282 (40%), Gaps = 11/282 (3%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
+E R D Y +++ K + +E ++ M R + + + V + +
Sbjct: 167 IENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKR 226
Query: 127 IAAAEKYFNGLSEY--AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I AEK F+ + + TY L++ YCK + A + E+M E N + FN+
Sbjct: 227 IRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNS 286
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + ++ + ++ R L+ +M+ D TY + +D +G + YE E
Sbjct: 287 LLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL-YEQATEK 345
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-A 302
+ T S L + K EKAE LKK E D Y+ ++ YC +++ A
Sbjct: 346 GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKA 405
Query: 303 VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
+ + + P + ++ L+ + +D EEW
Sbjct: 406 ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKA----EEW 443
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 126 GIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
GI EK +N + + +R Y A+++CY + T++A +L + M + + + +N
Sbjct: 645 GIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYN 704
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+L + R G+ ++ LVN MK + ++ TY + ++ + L D G + EM
Sbjct: 705 SLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREM 761
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 6/260 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRY 145
+ G A+ IE MES + + F +D + AE++ ++E +
Sbjct: 398 RIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVE 457
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L++ Y K +R + E+M+E+ N V++ +L + G+ + ++ M
Sbjct: 458 TYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDM 517
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA-SIYVKAE 264
R + + Y + + + + R F EM E TY+ L + K +
Sbjct: 518 ICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRS-EISPTLVTYNVLIDGLCKKGK 576
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLV 323
L E + + D Y+ LIS Y N N+ ++ +K+ PT +Y
Sbjct: 577 LTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHP 636
Query: 324 LLQALAKLNAIDILKQCFEE 343
L+ +K I+++++ + E
Sbjct: 637 LISGCSK-EGIELVEKLYNE 655
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 18/337 (5%)
Query: 50 LSALGATGGSVTGALNAYIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKM 107
LS LG G V AL + K ++ Y + L K G+ AL V + M+ +
Sbjct: 382 LSCLGRKG-QVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440
Query: 108 HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALA 165
+ + +D K + A F GL + TY +L+ + + A
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
L+E+M + + N V + +L + + G+ E + N+M + S D L +M
Sbjct: 501 LYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVF 560
Query: 226 HLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPR 282
+I+ +F E+ N D +Y+ L VKA +A EL E+
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDA---RSYTILIHGLVKAGFAHEAYELFYTMKEQGCVL 617
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWGILK----STFPPTNTSYLVLLQALAKLNAIDILK 338
D +AY+ +I +C + VN+ + +L+ PT +Y ++ LAK++ +D
Sbjct: 618 DTRAYNTVIDGFCKSGK---VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
FEE +S+ ++ + +I + + +EA LI
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLI 711
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 96/239 (40%), Gaps = 3/239 (1%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +++ +CK +A L E+M V + ++ ++ + ++ L + K
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
+ I L+ + Y + + + ID + E+ + +T ++ L VKAE
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT-WNCLLDALVKAEEI 740
Query: 267 EKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVL 324
+A + + ++++K + Y LI C + W + K F P +Y +
Sbjct: 741 SEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTM 800
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ LAK I FE+++ + D + + II + +A +F A+ +
Sbjct: 801 ISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 19/230 (8%)
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
L LF++M EL + N F L ++ R G+ + L+++MK ++ D + Y V +
Sbjct: 220 LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDC 279
Query: 224 YSHLNDIDGVERVFYEMCNE---CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
+ +D + F+EM +D TY+++ + KA+ +A + +++ K
Sbjct: 280 FGKAGKVDMAWKXFHEMKANGLVLDD----VTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 281 PRDRK-AYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILK 338
AY+ +I Y DA + + + P+ SY +L L + +D
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395
Query: 339 QCFEEWE----SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRAN 384
+ FEE + S+Y++ + D++ +A E AL+ +A K A
Sbjct: 396 KKFEEMKKDAIPNLSTYNI-MIDMLCKA-----GKLETALVVRDAMKDAG 439
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 120/291 (41%), Gaps = 11/291 (3%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLN 152
A+EV + M+ + + + + +++ K+ +A K FN + N TY AL+N
Sbjct: 276 AVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVN 335
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISL 212
+ +E + E+A +FE+M + + A+N L Y R G P+ + + M+
Sbjct: 336 AFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEP 395
Query: 213 DNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELA 272
D +Y + + +Y E F E + ++ L S + ++ + E
Sbjct: 396 DRASYNILVDAYGRAGLHREAEATF-ESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQV 454
Query: 273 LKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAK 330
+ +L + ++P D A + ++ Y LD + R+ + S+ V + A A+
Sbjct: 455 MAQLHKSGLRP-DTFALNAMLHAYARAGRLDDMERLLAAMDLAGSADVGSHNVAVNAYAR 513
Query: 331 LNAIDILKQCFEEWESRCSSYDMRLADVI-----IRAYLQKDMYEEAALIF 376
+ ++ FE R ADV+ + Y +K Y + IF
Sbjct: 514 AGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIF 564
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 121/336 (36%), Gaps = 42/336 (12%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LL YC RA + +M E + +N L+ K + +M
Sbjct: 224 TYALLLRAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRM 283
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K+ + TY + + Y ++F EM K TY+ L + + + L
Sbjct: 284 KKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEM-QSIGCKANICTYTALVNAFAREGL 342
Query: 266 FEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSYLVL 324
EKAE +++++ D AY+ L+ Y ++ FP + L
Sbjct: 343 CEKAEEVFEQMQQAGHEPDVYAYNALMEAYS---------------RAGFPQGASEIFSL 387
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRAN 384
+Q + C E +SY ++++ AY + ++ EA F + K++
Sbjct: 388 MQHMG----------C----EPDRASY-----NILVDAYGRAGLHREAEATFESLKQQGM 428
Query: 385 ASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKD 444
A KS + + RS + E +++ + RP ++ +
Sbjct: 429 APT--MKSHMLLLSAHARSGN----VGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGR 482
Query: 445 VDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLA 480
+D E + D ++++ + Y AG L
Sbjct: 483 LDDMERLLAAMDLAGSADVGSHNVAVNAYARAGYLG 518
>gi|414885834|tpg|DAA61848.1| TPA: leaf protein [Zea mays]
Length = 637
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+G ++ YC+E E AL ++M + + N V FN L +L V ++ M
Sbjct: 279 TWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLM 338
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ I D +TY + ++S L + VF +M E + YS LA +V+A+
Sbjct: 339 EKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMI-EAGIEPDPQVYSILAKGFVRAQQ 397
Query: 266 FEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNRVW 307
EKAE L ++ + P + + +IS +C+ +++++ RV+
Sbjct: 398 PEKAEDLLLQMSHLGLCP-NVVTFTTVISGWCSVADMESAMRVY 440
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 15/211 (7%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
GR AL ++ M+ + F L N +AA K + ++ + TY
Sbjct: 291 GRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMEKFGIKPDIVTY 350
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
LN + + + +F+KM E + ++ L+ ++R QPEK L+ QM
Sbjct: 351 SHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSH 410
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI------YV 261
+ + +T+ + + + D++ RV+ +M C+ Y NL + Y
Sbjct: 411 LGLCPNVVTFTTVISGWCSVADMESAMRVYDKM-------CKSGVYPNLRTFETLIWGYS 463
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLIS 292
+ + KAE L+ + E + +++ + LI+
Sbjct: 464 EQKQPWKAEEVLQMMRETGVKPKQSTYCLIA 494
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 11/222 (4%)
Query: 123 KTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
K + +A+ +F+ + KN ++G +L+ Y K T A LF++M + N V +
Sbjct: 272 KAGELESAKDFFDRMPN--KNVISWGIMLDGYIKNGDTNGARCLFDQMP----MKNLVTW 325
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
+ + Y R GQP K L + K+++I D + + + S L ID E + +
Sbjct: 326 STMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVG 385
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTS-NLD 301
+++L +Y K EK AL+ E P+D Y +I+ N D
Sbjct: 386 PSL-LSDLRVFTSLIDMYAKCGSIEK---ALQMFEMAHPKDLLCYSTMIAALANHGLGRD 441
Query: 302 AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
A+ + ++ P + ++L +L A +D ++ F++
Sbjct: 442 AIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQ 483
>gi|242053311|ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 5/239 (2%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGA 149
Y A+E+I M+SR + + L + A N AE YF + + + N + Y +
Sbjct: 201 YTKAMELINDMKSRGLQMDIVIYGTLLAICASHNYCEEAEVYFQKMKDEGHCPNLFHYSS 260
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
LLN Y + E+A L + + N V L +Y + G EK + L+ +++
Sbjct: 261 LLNAYSENSDYEKAELLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKAKELLTELEASG 320
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
+ D + Y + + I + +F EM E K +S + S + E++
Sbjct: 321 FAQDEMPYCILIDGLVKGGKIQEAKILFNEM-KEKGVKSDGYAFSIMISALHRGGHHEES 379
Query: 270 ELALKKLE-EMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLVLLQ 326
+ K+ E E D + + YC+T+++++V R+ + P N ++ L++
Sbjct: 380 KQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDELNISPDNITFNTLIR 438
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 18/337 (5%)
Query: 50 LSALGATGGSVTGALNAYIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKM 107
LS LG G V AL + K ++ Y + L K G+ AL V + M+ +
Sbjct: 382 LSCLGRKG-QVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440
Query: 108 HFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALA 165
+ + +D K + A F GL + TY +L+ + + A
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500
Query: 166 LFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
L+E+M + + N V + +L + + G+ E + N+M + S D L +M
Sbjct: 501 LYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVF 560
Query: 226 HLNDIDGVERVFYEMCNE--CEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPR 282
+I+ +F E+ N D +Y+ L VKA +A EL E+
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDA---RSYTILIHGLVKAGFAHEAYELFYTMKEQGCVL 617
Query: 283 DRKAYHFLISLYCNTSNLDAVNRVWGILK----STFPPTNTSYLVLLQALAKLNAIDILK 338
D +AY+ +I +C + VN+ + +L+ PT +Y ++ LAK++ +D
Sbjct: 618 DTRAYNTVIDGFCKSGK---VNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
FEE +S+ ++ + +I + + +EA LI
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLI 711
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 96/239 (40%), Gaps = 3/239 (1%)
Query: 147 YGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y +++ +CK +A L E+M V + ++ ++ + ++ L + K
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
+ I L+ + Y + + + ID + E+ + +T ++ L VKAE
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT-WNCLLDALVKAEEI 740
Query: 267 EKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVL 324
+A + + ++++K + Y LI C + W + K F P +Y +
Sbjct: 741 SEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTM 800
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ LAK I FE+++ + D + + II + +A +F A+ +
Sbjct: 801 ISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 19/230 (8%)
Query: 164 LALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQS 223
L LF++M EL + N F L ++ R G+ + L+++MK ++ D + Y V +
Sbjct: 220 LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDC 279
Query: 224 YSHLNDIDGVERVFYEMCNE---CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK 280
+ +D + F+EM +D TY+++ + KA+ +A + +++ K
Sbjct: 280 FGKAGKVDMAWKFFHEMKANGLVLDD----VTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 281 PRDRK-AYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILK 338
AY+ +I Y DA + + + P+ SY +L L + +D
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395
Query: 339 QCFEEWE----SRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRAN 384
+ FEE + S+Y++ + D++ +A E AL+ +A K A
Sbjct: 396 KKFEEMKKDAIPNLSTYNI-MIDMLCKA-----GKLETALVVRDAMKDAG 439
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 9/252 (3%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
L + YT+ L++ +CK+ + +F M + N V + +L Y + +
Sbjct: 260 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVN 319
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
K + ++ M QR ++ D +Y + + + + +D +F EM ++ TY++L
Sbjct: 320 KAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK-HIIPDVVTYNSL 378
Query: 257 ASIYVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLD-AVNRVWGILK 311
K K ALK ++EM P D Y ++ C +D A+ + +
Sbjct: 379 IDGLCK---LGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD 435
Query: 312 STFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEE 371
P +Y +L+ L K ++ FE+ + + + V+I + K +++E
Sbjct: 436 QGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDE 495
Query: 372 AALIFNNAKKRA 383
A + + K +
Sbjct: 496 ALALLSKMKDNS 507
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 154/377 (40%), Gaps = 19/377 (5%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
+ L K G R AL+++ ++ + + ++ +D K + A ++ +
Sbjct: 169 IHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGI 228
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N TY AL++ + + A+ LF KM + FN L + + G+ ++ +
Sbjct: 229 SPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 288
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
+ M ++ I + +TY M Y + +++ + + Y M + +Y+ L +
Sbjct: 289 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNP-DIQSYNILIDGF 347
Query: 261 VKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFP 315
K +K + A+ +EM + D Y+ LI C + A+ V + P
Sbjct: 348 CK---IKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 404
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P +Y +L AL K + +D + + + +M ++I + E+A I
Sbjct: 405 PDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNI 464
Query: 376 FNN-AKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDT 434
F + K N + + + MI+ ++ L +E A LS+ K P VT +
Sbjct: 465 FEDLLVKGYNITVNTY----TVMIHGFCNKGL---FDEALALLSKMKDNSCIPDAVTYEI 517
Query: 435 FFRFFEEEKDVDGAEEF 451
R ++ + D AE+
Sbjct: 518 IIRSLFDKDENDKAEKL 534
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 22/239 (9%)
Query: 128 AAAEKYFNGLSEYAKNRYT----------YGALLNCYCKELMTERALALFEKMDELKFLG 177
A EK+ + + AK R LL+ +CK M + A A+F ++ + LG
Sbjct: 191 AYTEKHLTHMRKLAKKRRVRLRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKR-RLLG 249
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
N ++ L + R P+K ++ +M Q + ++ TYI ++S+ + +F
Sbjct: 250 NAETYSILFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYIAAIESFCSAGLVSEARELF 309
Query: 238 YEMCNECEDKCRWT--TYSNLASIYVKAELFEKAELALKKLEEMKP----RDRKAYHFLI 291
M E T TYS + KA+ E+ + L +M+ D Y LI
Sbjct: 310 EFMRTEGSTISSPTAKTYSIMIVALAKADRMEE---CFELLSDMRSCGCMPDVSTYKELI 366
Query: 292 SLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKL-NAIDILKQCFEEWESRC 348
C LDA RV + ++ FPP +Y L L L A D L+ C E+ C
Sbjct: 367 EGMCLVGKLDAAYRVLEEMGRAGFPPDIVTYNCFLNVLCSLRKADDALELCERMIEAHC 425
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 12/246 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLG---NTVAFNNLSTMYLRLGQPEKVRPLV 202
+Y LL +C E E AL L M + + N V++ + + GQ +K L
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLF 226
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+M R I + +TY + +D E VF +M ++ K TY+ L Y+
Sbjct: 227 LEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK-GVKPDNDTYNCLIHGYLS 285
Query: 263 AELFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVW-GILKSTFPPT 317
K + ++ LEEM K Y L++ CN ++ +++ P
Sbjct: 286 ---IGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPN 342
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
Y +L+ A A+ + S D + ++I AY +K M +EA IFN
Sbjct: 343 VAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFN 402
Query: 378 NAKKRA 383
K++
Sbjct: 403 KMKQQG 408
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 3/195 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY +++ CK + +RA +F++M + + +N L YL +G+ ++V ++
Sbjct: 237 NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRML 296
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY-V 261
+M + D TY + + +F M + K Y L Y
Sbjct: 297 EEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRK-GIKPNVAIYGILIHGYAT 355
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTS 320
K L E +L +E D ++ + + Y + +D ++ +K P +
Sbjct: 356 KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415
Query: 321 YLVLLQALAKLNAID 335
Y L+ AL KL +D
Sbjct: 416 YGALIDALCKLGRVD 430
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 102/260 (39%), Gaps = 9/260 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTY 147
GR R A + + M + + + + + + A ++ N + E + + + +
Sbjct: 322 GRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+ Y K+ M + A+ +F KM + + V + L +LG+ + NQM
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMN 441
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC--EDKCRWTTYSNLASIYVKAEL 265
++ + + + ++ + + ++EM N+ D + T L ++ K ++
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI--LCNLCTKGQV 499
Query: 266 FEKAELALKKLEEMKPRDRK-AYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLV 323
KA+ + +E + R +Y LI +C +D + ++ S P +Y
Sbjct: 500 M-KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558
Query: 324 LLQALAKLNAIDILKQCFEE 343
LL + ID F E
Sbjct: 559 LLHGYCRAGRIDDAYGVFRE 578
>gi|15240478|ref|NP_198079.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635757|sp|O04647.2|PP399_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g27270; AltName: Full=Protein EMBRYO DEFECTIVE 976
gi|332006282|gb|AED93665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1038
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N +TY +++ Y K+ E AL F +M L F+ V ++++ ++ ++ G EK L
Sbjct: 292 NEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLY 351
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M+ + I N T + Y + +F +M + + IY K
Sbjct: 352 EDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM-ERNKIPADEVIRGLIIRIYGK 410
Query: 263 AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTS 320
LF A+ ++ E + D K Y + ++ N+ N+ V ++K+ P + +
Sbjct: 411 LGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFA 470
Query: 321 YLVLLQALAKLNAIDILKQCF 341
Y+V+LQ AK+ +D ++ F
Sbjct: 471 YIVMLQCYAKIQNVDCAEEAF 491
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + A+ + E M S+ + S A L L KT A F + ++ +
Sbjct: 340 KAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEV 399
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
G ++ Y K + A ++FE+ + L L + + +S ++L G K ++ M
Sbjct: 400 IRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMM 459
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K R+I L YIV +Q Y+ + ++D E F + ++ +++ ++Y + L
Sbjct: 460 KTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDA--SSCNDMLNLYTRLNL 517
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLY 294
EKA+ +K++ HF I LY
Sbjct: 518 GEKAKGFIKQIM------VDQVHFDIELY 540
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 141/374 (37%), Gaps = 35/374 (9%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ TY ++++ K E+A+ L+E M + + + ++Y + K
Sbjct: 324 FVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKAL 383
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNECEDKCRWTTYSNLA 257
L M++ I D + + ++ Y L + +F E N D+ TY ++
Sbjct: 384 SLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADE---KTYLAMS 440
Query: 258 SIYVKAELFEKAELALKKLEEMKPRD----RKAYHFLISLYCNTSNLDAVNRVWGILKST 313
+++ + K AL +E MK RD R AY ++ Y N+D + L T
Sbjct: 441 QVHLNSGNVVK---ALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKT 497
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P +S +L +LN + K ++ +D+ L +R Y ++ M EA
Sbjct: 498 GLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQ 557
Query: 374 -LIFNNAKKRANASARFFKS-RESFMIY--------YLRSRQLD-LALNEM------EAA 416
LI ++ RF ++ ES I L QLD +AL M E
Sbjct: 558 DLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGN 617
Query: 417 LSEAK-----QFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLI 470
L+E K F V+ F E DV AE ++ L ++ + LI
Sbjct: 618 LNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLI 677
Query: 471 KTYIAAGKLASDMR 484
Y KL R
Sbjct: 678 AVYGRQHKLKEAKR 691
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 131/325 (40%), Gaps = 16/325 (4%)
Query: 70 EGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVY---LDLTAKTNG 126
E K V D + +R L K G+Y A++ ++E K + TD +D K N
Sbjct: 197 ESKLVTLDTMSKVMRRLAKSGKYNKAVDA--FLEMEKSYGVKTDTIAMNSLMDALVKENS 254
Query: 127 IAAAEKYFNGLSEYAK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNL 185
I A + F L + K + T+ L++ +CK + A A+ + M +F + V + +
Sbjct: 255 IEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSF 314
Query: 186 STMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECE 245
Y + G +V ++ +M++ + + +TY + M S + V+ +M E
Sbjct: 315 VEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMK---E 371
Query: 246 DKCRWTT--YSNLASIYVKAELF-EKAELALKKLEEMKPRDRKAYHFLISLYCNTSN--- 299
D C YS+L I K F + AE+ + RD Y+ +IS + S
Sbjct: 372 DGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEM 431
Query: 300 -LDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
L + R+ + P +Y LL+ + +L S D+ +
Sbjct: 432 ALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYIL 491
Query: 359 IIRAYLQKDMYEEAALIFNNAKKRA 383
+IR EEA L F A ++
Sbjct: 492 LIRGLCMSGKVEEACLFFEEAVRKG 516
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 136/310 (43%), Gaps = 6/310 (1%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESRKMHF-SYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
+ + V L + ++ +L +++W+ ++ S + V L + A F+ +
Sbjct: 126 MRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEM 185
Query: 138 SE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
+ A +RYTY L+ + KE M + AL+ +KM++ + G+ V ++NL + +L
Sbjct: 186 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY 245
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
K + +++K+ I+ D + Y + + + EM + +YS
Sbjct: 246 SKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEM-RAVDVMPDTVSYST 304
Query: 256 LASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKST 313
L +++V+ E F +A + +++E+ P D + +I +Y + +R+ W + K
Sbjct: 305 LLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIG 364
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P SY +L+ + F + + ++ + +I+ Y + +E+A
Sbjct: 365 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKAT 424
Query: 374 LIFNNAKKRA 383
+ + +KR
Sbjct: 425 NLVQDMQKRG 434
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
E +N TY ++ Y K L E+A L + M + N + ++ + +++ + G+ ++
Sbjct: 399 EIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRS 458
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
L +++ +D + Y + +Y + +R+ +E+ + ++ R T + LA
Sbjct: 459 AMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHEL-KQPDNIPRTTAITILA- 516
Query: 259 IYVKAELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST--FP 315
KA E+A ++ + + +D + +I L+ V V+ +++ FP
Sbjct: 517 ---KAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFP 573
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWE 345
++ LV L A KL D + E +
Sbjct: 574 NSDVIALV-LNAYGKLRDFDTADALYMEMQ 602
>gi|2191192|gb|AAB61077.1| similar to N. tabacum membrane-associated salt-inducible protein
(PID:g473874) [Arabidopsis thaliana]
Length = 934
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N +TY +++ Y K+ E AL F +M L F+ V ++++ ++ ++ G EK L
Sbjct: 283 NEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLY 342
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
M+ + I N T + Y + +F +M + + IY K
Sbjct: 343 EDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM-ERNKIPADEVIRGLIIRIYGK 401
Query: 263 AELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTS 320
LF A+ ++ E + D K Y + ++ N+ N+ V ++K+ P + +
Sbjct: 402 LGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFA 461
Query: 321 YLVLLQALAKLNAIDILKQCF 341
Y+V+LQ AK+ +D ++ F
Sbjct: 462 YIVMLQCYAKIQNVDCAEEAF 482
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + A+ + E M S+ + S A L L KT A F + ++ +
Sbjct: 331 KAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEV 390
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
G ++ Y K + A ++FE+ + L L + + +S ++L G K ++ M
Sbjct: 391 IRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMM 450
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K R+I L YIV +Q Y+ + ++D E F + ++ +++ ++Y + L
Sbjct: 451 KTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDA--SSCNDMLNLYTRLNL 508
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLY 294
EKA+ +K++ HF I LY
Sbjct: 509 GEKAKGFIKQIM------VDQVHFDIELY 531
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 141/374 (37%), Gaps = 35/374 (9%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ TY ++++ K E+A+ L+E M + + + ++Y + K
Sbjct: 315 FVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKAL 374
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM--CNECEDKCRWTTYSNLA 257
L M++ I D + + ++ Y L + +F E N D+ TY ++
Sbjct: 375 SLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADE---KTYLAMS 431
Query: 258 SIYVKAELFEKAELALKKLEEMKPRD----RKAYHFLISLYCNTSNLDAVNRVWGILKST 313
+++ + K AL +E MK RD R AY ++ Y N+D + L T
Sbjct: 432 QVHLNSGNVVK---ALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKT 488
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P +S +L +LN + K ++ +D+ L +R Y ++ M EA
Sbjct: 489 GLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQ 548
Query: 374 -LIFNNAKKRANASARFFKS-RESFMIY--------YLRSRQLD-LALNEM------EAA 416
LI ++ RF ++ ES I L QLD +AL M E
Sbjct: 549 DLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGN 608
Query: 417 LSEAK-----QFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLI 470
L+E K F V+ F E DV AE ++ L ++ + LI
Sbjct: 609 LNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLI 668
Query: 471 KTYIAAGKLASDMR 484
Y KL R
Sbjct: 669 AVYGRQHKLKEAKR 682
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/371 (19%), Positives = 151/371 (40%), Gaps = 52/371 (14%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L K G + ALE++ + + + + +D K + A F+ SE
Sbjct: 305 INGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDA---FDLYSEKVS 361
Query: 143 NR-----YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEK 197
R +TY AL++ +C + A+ LF KM + + F+ L + + G ++
Sbjct: 362 KRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKE 421
Query: 198 VRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-------------- 243
+ ++ M +++I D +TY M Y +N+++ E +F M +
Sbjct: 422 AKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMIN 481
Query: 244 --CEDKC------------------RWTTYSNLASIYVKAELFEKAELALKKLEEMKPRD 283
C+ K TYS+L K+ + AL+ ++EM R
Sbjct: 482 GFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSG---RISYALELVDEMHYRG 538
Query: 284 RK----AYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILK 338
++ Y+ ++ C ++D A+ + + P +Y +L++ L + ++ +
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDAR 598
Query: 339 QCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMI 398
+ FE+ + + D+ V+I+ + K +++EA + +K N K+ E ++
Sbjct: 599 KVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALL--SKMEENGCIPDAKTYEIIIL 656
Query: 399 YYLRSRQLDLA 409
+ D+A
Sbjct: 657 SLFEKDENDMA 667
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 102/279 (36%), Gaps = 40/279 (14%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMD------------------------------- 171
++ +YG L+N CK T+ AL L + D
Sbjct: 297 DQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 356
Query: 172 ----ELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHL 227
+ + +N L + + +G+ + L N+M +NI D T+ + + +
Sbjct: 357 SEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKD 416
Query: 228 NDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKA 286
+I + V M + K TYS+L Y KAE + + ++
Sbjct: 417 GNIKEAKNVLAMMMKQ-SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQS 475
Query: 287 YHFLISLYCNTSNLDAVNRVWGIL--KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
Y+ +I+ +C +D +++ + K FP T Y L+ L K I + +E
Sbjct: 476 YNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT-YSSLIDGLCKSGRISYALELVDEM 534
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
R D+ + I+ A +K ++A + K +
Sbjct: 535 HYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 136/333 (40%), Gaps = 15/333 (4%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
Y + +R GR +V + M+ + + + FA G+ +A + E
Sbjct: 106 YMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREA 165
Query: 141 AK--NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
N YTY L+ K A+ +++ M E + ++ L + + + V
Sbjct: 166 GMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTV 225
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECED---KCRWTTYSN 255
L+N+M+ R + + +Y + ++ D Y + + ED K T++
Sbjct: 226 LWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEA----YHILGKMEDSGCKPDVVTHTV 281
Query: 256 LASIYVKAELFEKAELALKKLE--EMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKS 312
+ + A A+ K++ + KP DR Y L+ ++ + +V VW ++
Sbjct: 282 IIQVLCDAGRLSDAKAVFWKMKASDQKP-DRVTYITLLDKCGDSGDSQSVVEVWNAMVAD 340
Query: 313 TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ SY ++ AL ++ +D F+E + + S + + +I +L+ DM++ A
Sbjct: 341 GYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRA 400
Query: 373 ALIFNNAKKRANASARFFKSRESFMIYYLRSRQ 405
+FN+ + + + F+ YY +S Q
Sbjct: 401 LELFNHMNACGPSPNGY--THVLFINYYGKSGQ 431
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 140/333 (42%), Gaps = 17/333 (5%)
Query: 59 SVTGALNAYIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
SV NA + +G +++ Y V +L + GR AL V + M+ + M +
Sbjct: 329 SVVEVWNAMVADG--YNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNS 386
Query: 117 YLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+ K + A + FN ++ + N YT+ +N Y K + +A+ +E M
Sbjct: 387 LISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKG 446
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ + A N + G+ + + ++K +S D +TY + ++ S + D
Sbjct: 447 IVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAM 506
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKA-YHFLISL 293
F +M S + ++Y + E +L KL+EMK Y+ L+S
Sbjct: 507 NFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQL-FHKLKEMKIEPTNGTYNTLLSG 565
Query: 294 YCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEEWESRC 348
+ V ++ + ++ +PP +Y +L L+K AID+L + E C
Sbjct: 566 LGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDML---YSMTEKGC 622
Query: 349 SSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
+ D+ + ++ ++++ EEA +F KK
Sbjct: 623 AP-DLSSYNTVMYGLIKEERLEEAFRMFCQMKK 654
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 69 MEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME + D++ + V + L GR A V M++ + LD +
Sbjct: 267 MEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGD 326
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ + +N + Y N +Y A+++ C+ + ALA+F++M E ++N+
Sbjct: 327 SQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNS 386
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYS 225
L + +L+ ++ L N M S + T+++++ Y
Sbjct: 387 LISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYG 427
>gi|224104097|ref|XP_002313317.1| predicted protein [Populus trichocarpa]
gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 74 VRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAE 131
+R+D+ + +RS K G Y V+E+ME R S ++++ K I E
Sbjct: 288 LRQDIKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETFGKAGDIETME 347
Query: 132 KYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMY 189
+YF+ + N TY +L++ Y K + ++ +++ + +T FN + + Y
Sbjct: 348 EYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVDSILRQVENSDVILDTPFFNCVISAY 407
Query: 190 LRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
R G EK+ L M+ R D++T+ +Q+Y+ I+ +
Sbjct: 408 GRAGDIEKMSELFLGMEGRKCKPDSITFATMIQAYNAQGMIEAAQ 452
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 150/403 (37%), Gaps = 46/403 (11%)
Query: 84 RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVY--LDLTAKTNGIAAAEKYFNGLSE-- 139
+ L + R A++ IE + K + + AV LD K N +A K F L +
Sbjct: 50 KELSRILRTEAAIKAIEQKANSKKYNNLWPKAVLEALDDAIKENQWESALKIFELLRKQH 109
Query: 140 -YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
Y TY LL K E LFE M + L + Y + GQ +K
Sbjct: 110 WYEPRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVYTALVSAYGKSGQLDKA 169
Query: 199 RPLVNQMKQ-RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLA 257
+V +MK D TY + + L+ + + + EM + +C TY+ +
Sbjct: 170 FSIVVEMKAISECKPDVYTYSILINCCIKLHRFELIRGILAEM-SYLGIECSTVTYNTII 228
Query: 258 SIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT 317
Y KA++FE+ E L + I + +L N + G
Sbjct: 229 DGYGKAKMFEEMENTLTDM--------------IESGSSVPDLFTFNSIIG--------- 265
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
A ID +++ + E++ D++ +++IR+Y + MY + +
Sbjct: 266 ---------AYGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLE 316
Query: 378 NAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
+K RFF ++ + + ME S+ K +P VT +
Sbjct: 317 FMEK------RFFSPSIVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVS 370
Query: 438 FFEEEKDVDGAEEFCKVLKSLNC-LDFSAYSLLIKTYIAAGKL 479
+ + + + + +++ + LD ++ +I Y AG +
Sbjct: 371 AYSKAGHIMKVDSILRQVENSDVILDTPFFNCVISAYGRAGDI 413
>gi|226533082|ref|NP_001141414.1| uncharacterized protein LOC100273524 [Zea mays]
gi|194704512|gb|ACF86340.1| unknown [Zea mays]
Length = 637
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+G ++ YC+E E AL ++M + + N V FN L +L V ++ M
Sbjct: 279 TWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLM 338
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ I D +TY + ++S L + VF +M E + YS LA +V+A+
Sbjct: 339 EKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMI-EAGIEPDPQVYSILAKGFVRAQQ 397
Query: 266 FEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNRVW 307
EKAE L ++ + P + + +IS +C+ +++++ RV+
Sbjct: 398 PEKAEDLLLQMSHLGLCP-NVVTFTTVISGWCSVADMESAMRVY 440
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 15/211 (7%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTY 147
GR AL ++ M+ + F L N +AA K + ++ + TY
Sbjct: 291 GRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMEKFGIKPDIVTY 350
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
LN + + + +F+KM E + ++ L+ ++R QPEK L+ QM
Sbjct: 351 SHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSH 410
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI------YV 261
+ + +T+ + + + D++ RV+ +M C+ Y NL + Y
Sbjct: 411 LGLCPNVVTFTTVISGWCSVADMESAMRVYDKM-------CKSGVYPNLRTFETPIWGYS 463
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLIS 292
+ + KAE L+ + E + +++ + LI+
Sbjct: 464 EQKQPWKAEEVLQMMRETGVKPKQSTYCLIA 494
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 116/300 (38%), Gaps = 48/300 (16%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+TY +++C CKE E A LFE+M + +TV +N++ Y ++G+ + +
Sbjct: 134 FTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEE 193
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
MK + D +TY + + + F EM + K +YS L + K +
Sbjct: 194 MKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREM-KQSGLKPNVVSYSTLVDAFCKED 252
Query: 265 LFEKAELALKKLEEMK-----PRDRKAYHFLISLYCNTSNL-------DAVNRV---WGI 309
+ ++ ALK +M+ P + Y L+ YC NL D +++V W +
Sbjct: 253 MMQQ---ALKFYVDMRRLGLVPNEH-TYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNV 308
Query: 310 LKST--------------------------FPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
+ T P SY L+ K +D + +E
Sbjct: 309 VTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDE 368
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRS 403
+ R D+ L I + + E A ++ N +++ + F + + M Y +S
Sbjct: 369 MKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT--TLMDAYFKS 426
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 90/235 (38%), Gaps = 40/235 (17%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ + D++ Y + KFG+ LE M+ + + ++ +D K +
Sbjct: 194 MKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDM 253
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCK---------------------ELMTERA 163
+ A K++ + N +TY +L++ YCK ++T A
Sbjct: 254 MQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTA 313
Query: 164 L--------------ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
L LF KM + N ++ L +++ ++ L+++MK R
Sbjct: 314 LIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRG 373
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
I D L Y ++ S L I+ + V EM E K Y+ L Y K+E
Sbjct: 374 IKPDLLLYGTFIWSLCGLEKIEAAKVVMNEM-QEKGIKANTFIYTTLMDAYFKSE 427
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 73/192 (38%), Gaps = 13/192 (6%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+ AL + +E M E AL F KM + T + N L + RLG+ + ++ M
Sbjct: 65 VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW-----TTYSNLASIY 260
TY + + DI+ +F EM K R TY+++ Y
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEM------KFRGLIPDTVTYNSMIDGY 178
Query: 261 VKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTN 318
K + ++++ M D Y+ LI+ +C L + +K S P
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNV 238
Query: 319 TSYLVLLQALAK 330
SY L+ A K
Sbjct: 239 VSYSTLVDAFCK 250
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 109/295 (36%), Gaps = 42/295 (14%)
Query: 128 AAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A AE G + + +L++ YCK E A A+ E+M + V +N+L
Sbjct: 158 ALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVA 217
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE---- 243
R G+ + R +V+ MK+ + + +TY +++ Y N +D ++ EM +
Sbjct: 218 GLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLP 277
Query: 244 ------------CEDK------------------CRWTTYSNLASIYVKAELFEKAELAL 273
C+D TY L KA ++ +L
Sbjct: 278 DVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKA---QRGNESL 334
Query: 274 KKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQAL 328
L E+ R D Y L+ C +D ++ L P +Y VL+ AL
Sbjct: 335 SLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDAL 394
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
K +D +Q E E + S ++ II +++ +A K+R
Sbjct: 395 CKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 63 ALNAY---IMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
AL+ Y + EG V K +++ V L+K G+ A + M R + + ++ +D
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLID 532
Query: 120 LTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
KT + AA K L+E + Y +NC C ++ A + E+M
Sbjct: 533 GLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKP 592
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
+ V +N + R G+ K L+N MK+ +I + +TY
Sbjct: 593 DQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 128/321 (39%), Gaps = 7/321 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME + + YC + +L K R +L ++ + SR + + +D K
Sbjct: 305 MEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGK 364
Query: 127 IAAAEKYF-NGLSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I A+ F + LS+ + N TY L++ CK + A + +M+E N V F++
Sbjct: 365 IDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSS 424
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ ++ G K + +MK+R I + +TY + + V++EM E
Sbjct: 425 IINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEG 484
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKP-RDRKAYHFLISLYCNTSNLDAV 303
+ ++ S L + K EKAE +++ E D Y LI T NL A
Sbjct: 485 VEVNKFIVDS-LVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAA 543
Query: 304 NRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
+V L + P Y V + L L + EE +S D + +I A
Sbjct: 544 FKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAA 603
Query: 363 YLQKDMYEEAALIFNNAKKRA 383
++ +A + N K+ +
Sbjct: 604 QSREGKTAKALKLLNGMKRSS 624
>gi|414880641|tpg|DAA57772.1| TPA: hypothetical protein ZEAMMB73_835994 [Zea mays]
Length = 728
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 120/263 (45%), Gaps = 12/263 (4%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAA-AEKYFNGLSEYAKN-RYTYG 148
RY A E+ E ME + + A+ L++ K+ A A ++F ++ N + G
Sbjct: 291 RYDGAWEIFELMEKNNVQPDHGTSAIMLNIMKKSKVSAKDAWEFFKRMNRKGVNWSFDVG 350
Query: 149 A-LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
A L+N +C + + + AL + +M++ NT + L Y + Q E+ L +MK+
Sbjct: 351 AALINIFCSDGLKKEALIIQSEMEKRGIASNTSIYETLMKAYCKSNQIEEAEGLFVEMKE 410
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA-ELF 266
+++ TY + M +YS + VE + EM + + +Y+ L S Y + ++
Sbjct: 411 KSLQATTTTYNILMDAYSRRLQTEVVESLLLEM-QDLGIRPSARSYNCLISAYGRQKKMS 469
Query: 267 EKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLV 323
KAE A ++ + +KP +Y+ L+ Y + + ++ +K PT +Y
Sbjct: 470 GKAENAFLRMKRDGIKPLS-SSYNALLFAYAANGLHEKAHAIYMDMKREGLKPTLETYTA 528
Query: 324 LLQALAKLNAIDILKQCFEEWES 346
LL L + + L E W++
Sbjct: 529 LLDTLRRAGDTEKL---METWKT 548
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
+E K +R +++ Y V L R+ A ++ M +K+ + ++ LD K
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A++ F + + + TY +L+N C + A +F+ M L + V++N
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + + + E L +M QR + + +TY +Q + D+D + F +M
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL 300
WT L + EL E AL E+M+ R D Y +I C T
Sbjct: 396 ISPDIWTYNILLGGLCDNGEL----EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK- 450
Query: 301 DAVNRVWGILKS----TFPPTNTSYLVLLQALA 329
V W + S P +Y ++ L
Sbjct: 451 --VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 102/240 (42%), Gaps = 3/240 (1%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y +R T G+L+N +C+ A++L +KM E+ + + VA+N + + +
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+++++ I + +TY + + + R+ +M + + TYS L
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDA 269
Query: 260 YVK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
+VK ++ E EL + + D Y LI+ C +D N+++ ++ S +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 319 -TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
SY L+ K ++ + F E R + + +I+ + Q ++A F+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 12/231 (5%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G+ A E+ E M + ++ ++ + I A + F+ + +
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y L+N +CK E + LF +M + + NTV +N L + + G +K + +QM
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
IS D TY + + +++ +F +M + E TY+ + K
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-QKREMDLDIVTYTTVIRGMCKTGK 450
Query: 266 FEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
E+A L+LK L KP D Y ++S C L V ++ +K
Sbjct: 451 VEEAWSLFCSLSLKGL---KP-DIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 115/295 (38%), Gaps = 15/295 (5%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYG 148
R A+ +++ M + +D KT + A +F + N TY
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
AL+N C A L M + K N + ++ L +++ G+ + + L +M +
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVKAELF 266
+I D +TY + + ID ++F M ++ C +Y+ L + + KA+
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK---GCLADVVSYNTLINGFCKAK-- 344
Query: 267 EKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSY 321
+ E +K EM R + Y+ LI + ++D + + P +Y
Sbjct: 345 -RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+LL L ++ FE+ + R D+ +IR + EEA +F
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 132/343 (38%), Gaps = 55/343 (16%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG-QPEKVR--PL 201
YT+ ++NC+C AL++ KM L+LG +P++V L
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKM-------------------LKLGYEPDRVTIGSL 161
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
VN +RN D ++ + M + DI + +C T N A +
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK--------TKRVNDAFDFF 213
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTS 320
K E+ K ++P + Y L++ CN+S DA + ++K P +
Sbjct: 214 K-EIERKG---------IRP-NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y LL A K + K+ FEE D+ +I D +EA +F+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 381 KRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFE 440
+ + S + + + ++++++ + E Q VT +T + F
Sbjct: 323 SKGCLAD--VVSYNTLINGFCKAKRVEDGMK----LFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 441 EEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTY-IAAGKLASD 482
+ DVD A+EF + +DF S I TY I G L +
Sbjct: 377 QAGDVDKAQEF------FSQMDFFGISPDIWTYNILLGGLCDN 413
>gi|115465970|ref|NP_001056584.1| Os06g0111300 [Oryza sativa Japonica Group]
gi|113594624|dbj|BAF18498.1| Os06g0111300 [Oryza sativa Japonica Group]
Length = 978
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 4/245 (1%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N++TY ++ Y KE M E A+ F +M +F+ ++ L ++ + G+ E+
Sbjct: 272 APNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALG 331
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L ++MK ++I N T + Y D +F EM + + Y L IY
Sbjct: 332 LYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEM-EQNKIVPDEVIYGILVRIY 390
Query: 261 VKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
K L+E A+ +++++ D + Y + ++ N N D +V +++ P+
Sbjct: 391 GKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQ 450
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
SY LL+ +D + F S D+ + ++R Y++ ++A +
Sbjct: 451 FSYSALLRCHVAKEDVDAAEDTFRAL-SNYGPPDVFCCNDLLRLYMRLGHLDKARALILK 509
Query: 379 AKKRA 383
+K A
Sbjct: 510 MRKEA 514
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 109/278 (39%), Gaps = 23/278 (8%)
Query: 45 KLYKRLSALGATGGSVTGAL-----------NAY------IMEGKTVRKDMLEYCVRSLR 87
KL++ S GGSV A+ AY I +G + V L
Sbjct: 633 KLFETASTSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLT 692
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G+ A+ + + M S + S F + + + + + A + F+ E +
Sbjct: 693 KQGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEK 752
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L+ Y K A LF +M E ++FN + Y G + + +M
Sbjct: 753 TYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEM 812
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASIYVKAE 264
++ N D+ TY+ +++Y+ E M + C T +++L S ++K
Sbjct: 813 QKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSC--THFNHLISAFLKEG 870
Query: 265 LFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD 301
++A+ ++EE P D ++ ++ + +D
Sbjct: 871 QIDEAQRMYNQMEEAGIPADLACCRTMMRMHLDHGYVD 908
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 134/348 (38%), Gaps = 21/348 (6%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + Y LL Y + + A F +M + + VA L Y R G+ +
Sbjct: 166 YEPSVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDML 225
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+++R+I + +++ +M S + G +E E TY+ +
Sbjct: 226 MFYAAVRRRDI-VPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGS 284
Query: 260 YVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-STF 314
Y K + E+A + EMK R + Y LISL + ++ +K +
Sbjct: 285 YAKEGMLEEA---MDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSI 341
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P+N + +L K F E E D + +++R Y + +YE+A
Sbjct: 342 VPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQR 401
Query: 375 IFNNAKKRANASARFFKSRESFMI---YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVT 431
+F K A ++++ ++ + D AL ++A + + +P Q +
Sbjct: 402 MFEEIDK-----AGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAM----RARNVKPSQFS 452
Query: 432 VDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
R ++DVD AE+ + L + D + L++ Y+ G L
Sbjct: 453 YSALLRCHVAKEDVDAAEDTFRALSNYGPPDVFCCNDLLRLYMRLGHL 500
>gi|146083739|ref|XP_001464818.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134068913|emb|CAM67054.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 1002
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 153/370 (41%), Gaps = 37/370 (10%)
Query: 128 AAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A E++ L ++ + Y LL+ Y K + ER A EKM N V F L T
Sbjct: 550 ADVEEFLKTLPTWSTD--VYNVLLHMYGKSMDRERFDATLEKMKSQSVEMNDVTFGTLIT 607
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-----N 242
+ R G+ EKV ++ +K + + Y V S S + + +GVE + ++
Sbjct: 608 AFARWGEREKVNEVIQLLKSHDGGISATFYSVLASSLSRMGNEEGVENAWEDLLASRLFP 667
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDA 302
+ E Y+ S+Y + K + L + + P + ++ + + +
Sbjct: 668 DTE------VYNQFLSLYSRQNNVSKMQGVLDNMMKQVPPNPVTATTVLDMLGKSGRMSE 721
Query: 303 VNRVWGILKST--FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
+ ++ +KST PT+ ++ ++ A AK + +++ EE+ + + + ++++
Sbjct: 722 MESLFDDMKSTPDTAPTSVTFHQVMNAYAKTGDVVKMEKVHEEFLEKGYTENNVTYNILM 781
Query: 361 RAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMI-YYLRSRQLDLALNEMEAALSE 419
+ + YE+ + +KR+ A MI Y RSR LD +++ E
Sbjct: 782 DGHGRAKGYEQMEEL---RQKRSAAGIPMDDITYCIMIAAYGRSR-LD---KDVQRLFDE 834
Query: 420 AKQFHWRPMQV------TVDTFFRFFEEEKDVDGAEEFCKVLKSLN----CLDFSAYSLL 469
+ RP+ +D F R G E+ ++L++LN L S Y L
Sbjct: 835 VTKEENRPLLTKRVVWSAMDAFCRC----NSTAGMEKCVELLRALNGEGEALTSSDYCGL 890
Query: 470 IKTYIAAGKL 479
I Y G++
Sbjct: 891 IPYYCRMGQM 900
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 116/299 (38%), Gaps = 7/299 (2%)
Query: 22 STPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEY 81
S+PT SQ +PTP + + S L + G L
Sbjct: 11 SSPT--TSQNSQSPTPLKDCDSPPFFLPPSIQNVDDAVSLSVLTKILKRGYPPDTVTLNT 68
Query: 82 CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL-SEY 140
++ L G+ + AL + + ++ + +A ++ + AA K+ +
Sbjct: 69 LIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRL 128
Query: 141 AK-NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
AK N Y +++ CK + A LF +M N V ++ L + +G+ ++
Sbjct: 129 AKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEAL 188
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L+N M + I+ + TY + + + + + V M C K TYS L
Sbjct: 189 GLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACV-KSNVITYSTLMDG 247
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPP 316
Y +KA+ + M D +Y+ +I+ +C +D A+N ++ S FPP
Sbjct: 248 YFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/406 (19%), Positives = 148/406 (36%), Gaps = 34/406 (8%)
Query: 79 LEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLS 138
L ++ L G+ + AL + + ++ + +A ++ K A K +
Sbjct: 380 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID 439
Query: 139 E--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPE 196
N Y +++ CK + A LF +M + V ++ L + +G+ +
Sbjct: 440 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLK 499
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
+ L+N+M + I+ D TY + + + + + V M C K TY+ L
Sbjct: 500 EAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACV-KPDVFTYNTL 558
Query: 257 ASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTF 314
+ Y+ +KA+ + M D Y LI+ +C + +D A+N + +
Sbjct: 559 MNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNM 618
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P +Y L+ L K I + +E R D+ + +I + ++A
Sbjct: 619 VPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIA 678
Query: 375 IFNNAKK---RANA------------SARFFKSRESFMIYYLRSRQLDL----------- 408
+FN K R N R ++E F + LD+
Sbjct: 679 LFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHC 738
Query: 409 ---ALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEF 451
L E LS+ ++ P VT D ++ + D AE+
Sbjct: 739 KQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKL 784
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 62 GALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLD 119
G LN ++ KT+ D+ Y V +L K G+ + A V+ M + + ++
Sbjct: 503 GLLNEMVL--KTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN 560
Query: 120 LTAKTNGIAAAEKYFNGLS--EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLG 177
+ A+ FN +S + +TY L+N +CK M + AL LF++M + +
Sbjct: 561 GYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP 620
Query: 178 NTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
+TV +++L + G+ V L+++M+ R D +TY
Sbjct: 621 DTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITY 660
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 77 DMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
D++ Y + L K G A+ + M+ + + + F + LD K + A++ F
Sbjct: 656 DVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVF 715
Query: 135 NGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
L Y + Y Y ++ +CK+ + E AL + KM+E + N V F+ + +
Sbjct: 716 QDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKK 775
Query: 193 GQPEKVRPLVNQMKQRNI 210
+ +K L+ QM R +
Sbjct: 776 DENDKAEKLLRQMIARGL 793
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 93/239 (38%), Gaps = 11/239 (4%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
+T L+NC+C ++ K+ + + +TV N L GQ +K ++
Sbjct: 343 FTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDK 402
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
+ + L+ ++Y + + D G ++ ++ K YS + K +
Sbjct: 403 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLT-KPNVEMYSTIIDALCKYQ 461
Query: 265 LFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTN 318
L +A E+ +K + D Y LI +C L +A+ + ++ T P
Sbjct: 462 LVSEAYGLFSEMTVKGISA----DVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDV 517
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
+Y +L+ AL K + K C D+ + ++ YL ++A +FN
Sbjct: 518 RTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFN 576
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 82/198 (41%), Gaps = 24/198 (12%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY L++ CKE + A ++ M + N + ++ L Y + + +K + +
Sbjct: 202 NVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVF 261
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC----------NECEDK-CRWT 251
N M ++ D +Y + + + + +D +F EM N+ D +
Sbjct: 262 NAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMK 321
Query: 252 TYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGIL 310
YS S+ + E L+ ++P D + LI+ +C+ + + + IL
Sbjct: 322 HYSTAVSLSHRLE-----------LKGIQP-DLFTLNILINCFCHMGQITFGFSVLAKIL 369
Query: 311 KSTFPPTNTSYLVLLQAL 328
K +PP+ + L++ L
Sbjct: 370 KRGYPPSTVTLNTLIKGL 387
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-- 140
+ SL K GR A + M R + F +D K AE+ F + +
Sbjct: 398 INSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNL 457
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N TY ALL+ YCK E A + +KM++ N + F+++ Y + G K
Sbjct: 458 APNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVD 517
Query: 201 LVNQMKQRNISLDNLTYIVWMQSY 224
++ +M QRN+ + + Y + + Y
Sbjct: 518 VLREMVQRNVMPNTIVYAILIDGY 541
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 16/259 (6%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--S 138
YC++ G+ AL+++ M+S + + + + + KT + AE + +
Sbjct: 680 YCIK-----GKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVM 734
Query: 139 EYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
E+ T+ L+ Y + ++ L + EK+ + +N L T++ RLG K
Sbjct: 735 EFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKA 794
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
+ ++++M +R IS D +TY ++ Y + ++ + + +M + TTY+ L
Sbjct: 795 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAP-NITTYNTLLG 853
Query: 259 IYVKAELFEKAELALKKL-EEMKPR----DRKAYHFLISLYCNTSNLD--AVNRVWGILK 311
A L E+ +KL EM R + Y L+S Y N + + I K
Sbjct: 854 GLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITK 913
Query: 312 STFPPTNTSYLVLLQALAK 330
F PT +Y VL+ AK
Sbjct: 914 G-FVPTLKTYNVLISDYAK 931
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 30/278 (10%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M K + D++ Y + K G AL +++ M+ + + F D Y A G
Sbjct: 592 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRF---DVVAY---NALIKG 645
Query: 127 IAAAEKYFN----------GLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFL 176
+ KY GL A + TY ++N YC + TE AL + +M +
Sbjct: 646 LLRLGKYDPRYVCSRMIELGL---APDCITYNTIINTYCIKGKTEDALDILNEMKSYGIM 702
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
N V +N L + G EK +++M +T+ +++YS D + ++
Sbjct: 703 PNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI 762
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLIS 292
+E + T Y+ L +++ + + KA++ L+EM R D Y+ LI
Sbjct: 763 -HEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVV---LDEMVKRGISADLVTYNALIR 818
Query: 293 LYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALA 329
YC S+++ + + + P T+Y LL L+
Sbjct: 819 GYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLS 856
>gi|398013647|ref|XP_003860015.1| hypothetical protein, conserved [Leishmania donovani]
gi|322498234|emb|CBZ33308.1| hypothetical protein, conserved [Leishmania donovani]
Length = 1002
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 153/370 (41%), Gaps = 37/370 (10%)
Query: 128 AAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLST 187
A E++ L ++ + Y LL+ Y K + ER A EKM N V F L T
Sbjct: 550 ADVEEFLKTLPTWSTD--VYNVLLHMYGKSMDRERFDATLEKMKSQSVEMNDVTFGTLIT 607
Query: 188 MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-----N 242
+ R G+ EKV ++ +K + + Y V S S + + +GVE + ++
Sbjct: 608 AFARWGEREKVNEVIQLLKSHDGGISATFYSVLASSLSRMGNEEGVENAWEDLLASRLFP 667
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDA 302
+ E Y+ S+Y + K + L + + P + ++ + + +
Sbjct: 668 DTE------VYNQFLSLYSRQNNVSKMQGVLDNMMKQVPPNPVTATTVLDMLGKSGRMSE 721
Query: 303 VNRVWGILKST--FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVII 360
+ ++ +KST PT+ ++ ++ A AK + +++ EE+ + + + ++++
Sbjct: 722 MESLFDDMKSTPDTAPTSVTFHQVMNAYAKTGDVVKMEKVHEEFLEKGYTENNVTYNILM 781
Query: 361 RAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMI-YYLRSRQLDLALNEMEAALSE 419
+ + YE+ + +KR+ A MI Y RSR LD +++ E
Sbjct: 782 DGHGRAKGYEQMEEL---RQKRSAAGIPMDDITYCIMIAAYGRSR-LD---KDVQRLFDE 834
Query: 420 AKQFHWRPMQV------TVDTFFRFFEEEKDVDGAEEFCKVLKSLN----CLDFSAYSLL 469
+ RP+ +D F R G E+ ++L++LN L S Y L
Sbjct: 835 VTKEENRPLLTKRVVWSAMDAFCRC----NSTAGMEKCVELLRALNDEGEALTSSDYCGL 890
Query: 470 IKTYIAAGKL 479
I Y G++
Sbjct: 891 IPYYCRMGQM 900
>gi|302761110|ref|XP_002963977.1| hypothetical protein SELMODRAFT_82002 [Selaginella moellendorffii]
gi|300167706|gb|EFJ34310.1| hypothetical protein SELMODRAFT_82002 [Selaginella moellendorffii]
Length = 716
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 141 AKNRYTYGALLNCYCKELMTE--RALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
A N TY LL C +T+ RAL + E M E + V++N L YL G E+
Sbjct: 424 AANVVTYNTLLQGVCVFPITDMKRALEIVEDMKEAGVELDVVSYNTLINGYLEAGDNEQA 483
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
+M++ + +TY M++++ + V +VF +M + + ++ L
Sbjct: 484 LAAFTRMREAKVPASKVTYGTLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWNTLID 543
Query: 259 IYVKAELFEKAELALKKLEEMKPRD----RKAYHFLISLYCNTSNLDAVNRVW 307
Y +A L + A A LE+MK R Y+ L+ Y + N + +W
Sbjct: 544 AYARAGLEQDATRA---LEDMKSRGFSPTNATYNTLVKTYGRSRNFGLLILLW 593
>gi|297849526|ref|XP_002892644.1| hypothetical protein ARALYDRAFT_888450 [Arabidopsis lyrata subsp.
lyrata]
gi|297338486|gb|EFH68903.1| hypothetical protein ARALYDRAFT_888450 [Arabidopsis lyrata subsp.
lyrata]
Length = 169
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 20/155 (12%)
Query: 22 STPTETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIME-----GKTVRK 76
+TP T R ++P+ ++K+L GS+ +IM+ G +V
Sbjct: 11 ATPPLTTGDRASSPSAAHESANSSIFKKL-------GSLISETLDFIMKEEEKKGVSVSH 63
Query: 77 DMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF-- 134
+ L + L K G+ +ALE+ WM+ +KM FS ++ A+++++ AKT G+ A Y
Sbjct: 64 EDLVSWAKQLDKEGKREYALEIFMWMDKKKMSFSTSELALFVNVIAKTRGLDDAHAYLKK 123
Query: 135 -----NGLSEYAKNRYTYGALLNCYCKELMTERAL 164
+ + + KN Y +LL EL+ +R +
Sbjct: 124 VDPDCDRMDQPNKNWPAYVSLLRLET-ELLKKRGI 157
>gi|125584236|gb|EAZ25167.1| hypothetical protein OsJ_08968 [Oryza sativa Japonica Group]
Length = 566
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 13/247 (5%)
Query: 146 TYGALLNCYCKELMT------ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
T+ +L++ CKE E A+ L +M+ + L +N + G+ ++V
Sbjct: 252 TWNSLIHGLCKERRVKEASDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVN 311
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L+N+M +R + D++T + +Y D+ +V M E + TY L
Sbjct: 312 VLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMM-ESGLQLDQFTYKALVHG 370
Query: 260 YVKAELFEKAELALKKLEEMKPRDRKAYHFL---ISLYCNTSNLDAVNRVWG-ILKSTFP 315
+ KA+ ++A+ AL E M Y L + CN +N AV + ++K FP
Sbjct: 371 FCKAKELDEAKEAL--FEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFP 428
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P Y L++ L K ID+ F E + + D + + AYL A I
Sbjct: 429 PDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDI 488
Query: 376 FNNAKKR 382
N K+
Sbjct: 489 LNEMAKK 495
>gi|388518405|gb|AFK47264.1| unknown [Lotus japonicus]
Length = 414
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 46 LYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHAL--EVIEW-M 102
L +++ A G+V+ LNA++ K +R + L L++ H L EV E +
Sbjct: 107 LMRQIICFSAEKGNVSDLLNAWVKIMKPIRAEWLSV----LKELETMEHPLYLEVAEHAL 162
Query: 103 ESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMT 160
+ D+ + K N + AE + + + ++ +++ Y K
Sbjct: 163 LEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQVILTTMVHIYSKAGHL 222
Query: 161 ERALALFEKMDELKFLGNTV---AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTY 217
+RA FE E++ LG + ++ ++ T Y+R G PE+ L+ +M R I + Y
Sbjct: 223 DRAEEYFE---EIRLLGEPLDKRSYGSMITAYIRAGMPERGESLLEEMDAREIYAGSEVY 279
Query: 218 IVWMQSYSHLNDIDGVERVF 237
+++YS + + +G +RVF
Sbjct: 280 KALLRAYSRIGNAEGAQRVF 299
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 129/305 (42%), Gaps = 9/305 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ +L + GR ALE+ + M+ + + + + K + A + F + +
Sbjct: 467 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 526
Query: 143 --NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N YT+ +N Y K + +A+ +E M + + VA N + + G+ +
Sbjct: 527 KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 586
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
+ +++K +S D +TY + ++ S + D ++FY+M N C ++L
Sbjct: 587 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV--LAVNSLIDT 644
Query: 260 YVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT 317
KA ++A +L+EM +P D L L + ++ + + S +PP
Sbjct: 645 LYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPN 704
Query: 318 NTSYLVLLQALAKLNAI-DILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+Y +L L K A+ D L + C D+ + +I ++++ Y EA IF
Sbjct: 705 LITYNTILDCLCKNGAVNDALDMLYSMTTKGCIP-DLSSYNTVIYGLVKEERYNEAFSIF 763
Query: 377 NNAKK 381
KK
Sbjct: 764 CQMKK 768
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 121/314 (38%), Gaps = 42/314 (13%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME V+ ++ Y C+R L + R+ A ++ ME+ V + +
Sbjct: 346 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 405
Query: 127 IAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
I+ A+ F + S+ +R TY LL+ + ++ + ++ M + N VA+
Sbjct: 406 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 465
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
+ ++G+ + + ++MKQ+ I + YS
Sbjct: 466 VIDALCQVGRVFEALEMFDEMKQKGIV---------PEQYS------------------- 497
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSN--LDA 302
Y++L S ++KA+ F A K ++ P+ H L Y S + A
Sbjct: 498 --------YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKA 549
Query: 303 VNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
+ R + P + +L LAK + + K+ F E ++ S D ++I+
Sbjct: 550 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKC 609
Query: 363 YLQKDMYEEAALIF 376
+ ++EA IF
Sbjct: 610 CSKASKFDEAVKIF 623
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 7/228 (3%)
Query: 125 NGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAF 182
N I AE F + E + +TY LL+ K + E L + E+M + V +
Sbjct: 894 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 953
Query: 183 NNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCN 242
N + + ++ + E+ L + + S TY + I+ E +F EM
Sbjct: 954 NTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 1013
Query: 243 -ECEDKCRWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNL 300
C+ C T Y+ L + + A EK L +++ D K+Y +I C L
Sbjct: 1014 YGCKANC--TIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 1071
Query: 301 -DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
D + +L+ P +Y +L+ L K ++ F E + +
Sbjct: 1072 NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 1119
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 117/271 (43%), Gaps = 13/271 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
V L K R A E+++ M + + +D KT + A++ F +SE Y
Sbjct: 616 VDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGY 675
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N YTY +L+N KE + L + KM E N V + ++ ++G+ E+
Sbjct: 676 CPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYR 735
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE-CEDKCRWTTYSNLASI 259
L+ +M++ + +TY + + + I+ ++ +MC++ C + TY L +
Sbjct: 736 LMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPN--FITYRVLINH 793
Query: 260 YVKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP 315
L ++A + L+EMK PR +Y +I + N + ++ + + ++
Sbjct: 794 CCSTGLLDEAH---RLLDEMKQTYWPRHISSYRKIIEGF-NREFITSIGLLDELSENESV 849
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWES 346
P + Y +L+ K ++ EE S
Sbjct: 850 PVESLYRILIDNFIKAGRLEGALNLLEEISS 880
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 30/301 (9%)
Query: 84 RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKN 143
R L G++ A E+I M S+ D + Y + + EK F E KN
Sbjct: 426 RCLCGAGKFDKAFEIICEMMSKGF---VPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKN 482
Query: 144 R-----YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKV 198
YTY L++ +CK + ++A F++M N V + +L YL+ +
Sbjct: 483 GIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDA 542
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC----------------N 242
L M + +TY + + ID +++ M N
Sbjct: 543 NKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDN 602
Query: 243 ECEDKCRWTTYSNLASIYVKAELFEKAE--LALKKLEEMKPRDRKAYHFLISLYCNTSNL 300
+CE TY L KA E+A L + +P ++ Y LI +C T L
Sbjct: 603 DCETP-NIITYGALVDGLCKANRVEEAHELLDTMSVNGCEP-NQIVYDALIDGFCKTGKL 660
Query: 301 DAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAID-ILKQCFEEWESRCSSYDMRLADV 358
+ V+ + + + P +Y L+ +L K +D +LK + E+ C+ + D+
Sbjct: 661 ENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDM 720
Query: 359 I 359
I
Sbjct: 721 I 721
>gi|297741482|emb|CBI32614.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 6/197 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK----- 142
K GR + ++E M + S D Y + + + ++ L+E +
Sbjct: 373 KEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPA 432
Query: 143 NRYTYGALLNCYCKELMTERALALFEKM-DELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
NR TY LL YC++L ++A L +M D+ + + V++N L + +
Sbjct: 433 NRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAY 492
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
N+M+ R I+ ++Y M++++ +VF EM + K ++ L +
Sbjct: 493 FNEMRARGIAPTKISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLVAWNMLVEAHC 552
Query: 262 KAELFEKAELALKKLEE 278
+ L E+A+ ++++ E
Sbjct: 553 RLGLVEEAKKTVQRMRE 569
>gi|55295905|dbj|BAD67773.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 1013
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 4/245 (1%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N++TY ++ Y KE M E A+ F +M +F+ ++ L ++ + G+ E+
Sbjct: 272 APNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALG 331
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L ++MK ++I N T + Y D +F EM + + Y L IY
Sbjct: 332 LYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEM-EQNKIVPDEVIYGILVRIY 390
Query: 261 VKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
K L+E A+ +++++ D + Y + ++ N N D +V +++ P+
Sbjct: 391 GKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQ 450
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
SY LL+ +D + F S D+ + ++R Y++ ++A +
Sbjct: 451 FSYSALLRCHVAKEDVDAAEDTFRAL-SNYGPPDVFCCNDLLRLYMRLGHLDKARALILK 509
Query: 379 AKKRA 383
+K A
Sbjct: 510 MRKEA 514
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 94/223 (42%), Gaps = 6/223 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
++S+ + G+ A+ + + M S + S F + + + + + A + F+ E
Sbjct: 723 IKSMLESGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGL 782
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY +L+ Y K A LF +M E ++FN + Y G +
Sbjct: 783 PIDEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEI 842
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
+ +M++ N D+ TY+ +++Y+ E M + C T +++L S
Sbjct: 843 IFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSC--THFNHLISA 900
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD 301
++K ++A+ ++EE P D ++ ++ + +D
Sbjct: 901 FLKEGQIDEAQRMYNQMEEAGIPADLACCRTMMRMHLDHGYVD 943
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 114/311 (36%), Gaps = 63/311 (20%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL 151
Y AL+V++ M +R + S ++ L + AAE F LS Y
Sbjct: 431 YDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRALSNYGPP-------- 482
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR--- 208
+ +C N+L +Y+RLG +K R L+ +M++
Sbjct: 483 DVFC--------------------------CNDLLRLYMRLGHLDKARALILKMRKEALQ 516
Query: 209 ------------------NISLDNLTYIVWMQSYSH--LNDIDGVERVFYEMCNECEDK- 247
N DNLT ++ + S LN D M DK
Sbjct: 517 FDEDLCVTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDS--STLSMMLKSLLDKP 574
Query: 248 CRWTTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNR 305
++ S L + + ++A+ + L E+ KP D A LI Y L+ +
Sbjct: 575 GGLSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKP-DDTAIATLIVQYGQAQQLEQAQK 633
Query: 306 VWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
++ ++FP + Y ++ AL + + + F E + + D +++ +
Sbjct: 634 LFETASTSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTK 693
Query: 366 KDMYEEAALIF 376
++ ++EA I
Sbjct: 694 QEKFQEAENII 704
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 134/348 (38%), Gaps = 21/348 (6%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + Y LL Y + + A F +M + + VA L Y R G+ +
Sbjct: 166 YEPSVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDML 225
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+++R+I + +++ +M S + G +E E TY+ +
Sbjct: 226 MFYAAVRRRDI-VPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGS 284
Query: 260 YVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-STF 314
Y K + E+A + EMK R + Y LISL + ++ +K +
Sbjct: 285 YAKEGMLEEA---MDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSI 341
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P+N + +L K F E E D + +++R Y + +YE+A
Sbjct: 342 VPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQR 401
Query: 375 IFNNAKKRANASARFFKSRESFMI---YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVT 431
+F K A ++++ ++ + D AL ++A + + +P Q +
Sbjct: 402 MFEEIDK-----AGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAM----RARNVKPSQFS 452
Query: 432 VDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
R ++DVD AE+ + L + D + L++ Y+ G L
Sbjct: 453 YSALLRCHVAKEDVDAAEDTFRALSNYGPPDVFCCNDLLRLYMRLGHL 500
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY-- 140
+ SL K GR A + M R + F +D K AE+ F + +
Sbjct: 398 INSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNL 457
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N TY ALL+ YCK E A + +KM++ N + F+++ Y + G K
Sbjct: 458 APNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVD 517
Query: 201 LVNQMKQRNISLDNLTYIVWMQSY 224
++ +M QRN+ + + Y + + Y
Sbjct: 518 VLREMVQRNVMPNTIVYAILIDGY 541
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 102/244 (41%), Gaps = 1/244 (0%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
+ N TY L++C CK A+ +F +M + N V +N+L + +G+
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L+ M +R I + +T+ + ++ + I + ++ M +T + + +
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGL 302
Query: 260 YVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNT 319
L E ++ + Y LI +C + ++ +++ + NT
Sbjct: 303 CTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362
Query: 320 -SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
+Y VL+Q + D+ ++ F + SR + D+R +V++ E+A +IF
Sbjct: 363 ITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKY 422
Query: 379 AKKR 382
+KR
Sbjct: 423 MRKR 426
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 96 LEVIEWMESRKMHFSYTDFAVYLDL---TAKTNGIAAAEK--------YFNGLSEYAKNR 144
++V + ME+++++ +VY D+ TA NG+ + Y + Y N
Sbjct: 268 VKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNE 327
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
TY L++ +CK E +F +M + + NT+ + L Y +G+P+ + + NQ
Sbjct: 328 VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQ 387
Query: 205 MKQRNISLDNLTYIVWMQS 223
M R D TY V +
Sbjct: 388 MGSRRAPPDIRTYNVLLDG 406
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 111/280 (39%), Gaps = 16/280 (5%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
T+ +LL+ +C E ALALF+++ + F N V + L + + NQM
Sbjct: 154 TFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM 213
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK-AE 264
I + +TY + + + +M + T++ L +VK +
Sbjct: 214 GDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKR-GIQPNVITFTALIDAFVKVGK 272
Query: 265 LFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPTNTSYLV 323
+ E EL ++ D Y LI+ C LD +++ +++S + P +Y
Sbjct: 273 IMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTT 332
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN-AKKR 382
L+ K ++ + F E + + V+I+ Y + A +FN +R
Sbjct: 333 LIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRR 392
Query: 383 ANASARFFK-----------SRESFMIY-YLRSRQLDLAL 410
A R + ++ MI+ Y+R R++D+ +
Sbjct: 393 APPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINI 432
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 14/224 (6%)
Query: 68 IMEGKTVRKDMLEYCV-----------RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV 116
IME K + K M++ V L +GR A ++ MES + + +
Sbjct: 273 IMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTT 332
Query: 117 YLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELK 174
+ K+ + K F +S+ N TY L+ YC + A +F +M +
Sbjct: 333 LIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRR 392
Query: 175 FLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVE 234
+ +N L G EK + M++R + ++ +TY + +Q + ++
Sbjct: 393 APPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAF 452
Query: 235 RVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE 278
+F + ++ K TY+ + S + + +A+ KK++E
Sbjct: 453 DLFCSLFSK-GMKPNVITYTTMISGFCRRGFIHEADALFKKMKE 495
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 153/365 (41%), Gaps = 9/365 (2%)
Query: 78 MLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL 137
ML +R G+ A E+ E M S+ +++ + K +A + + +
Sbjct: 315 MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM 374
Query: 138 SE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQP 195
E A N TY LL+ +C+ M + A A+ ++M F N+ +N + + G+
Sbjct: 375 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKL 434
Query: 196 EKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSN 255
++ LV +MK + D TY + + + ++ E +F + E TY+
Sbjct: 435 DQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEE-GVVANGITYNT 493
Query: 256 LASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKST 313
L ++ +++ LA + L D +Y+ LI C N+D ++ + ++
Sbjct: 494 LIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG 553
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P N SY +L+ L K + + +E ++ + D+ + +I L K + AA
Sbjct: 554 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING-LCKVGWTHAA 612
Query: 374 LIFNNAKKRANASARFFKSRESFMI-YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTV 432
L N +K N + + +I ++ + R LD A ++ A+S + R + V
Sbjct: 613 L--NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMV 670
Query: 433 DTFFR 437
F R
Sbjct: 671 QNFVR 675
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 13/272 (4%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
V L G+ A+ ++ M + K + F +D K + L E Y
Sbjct: 112 VHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGY 171
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N ++Y +L++ KE E + L+++M E NT+ ++ L R G+P++ +
Sbjct: 172 RGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE 231
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
+ +MK + + ++ TY M Y DI V+ EM N+C YS L +
Sbjct: 232 YLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNH--HEVCYSILING 289
Query: 260 YVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFP--- 315
K ++A + K++ + D AY +I +CN ++ +++ + P
Sbjct: 290 LCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQ 349
Query: 316 PTNTSYLVLLQALAKLN----AIDILKQCFEE 343
P +Y +LL A N AIDIL ++
Sbjct: 350 PDVVTYNILLNAFCTKNSVSRAIDILNTMLDQ 381
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 101/260 (38%), Gaps = 7/260 (2%)
Query: 122 AKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNT 179
+ + A + F G+S+ + YTY L++ C E + A++L ++M N
Sbjct: 11 CRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNP 70
Query: 180 VAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE 239
VAFN L + + G + LV+ M + + +TY + +D +
Sbjct: 71 VAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNR 130
Query: 240 MC-NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRK-AYHFLISLYCNT 297
M N+C T+ L +VK L LEE R + +Y LIS
Sbjct: 131 MVANKCVP--NDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKE 188
Query: 298 SNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLA 356
+ ++W +++ P Y L+ L + D K+ E +++ + +
Sbjct: 189 GKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTY 248
Query: 357 DVIIRAYLQKDMYEEAALIF 376
++ Y + +A L++
Sbjct: 249 SSLMWGYFEAGDIHKAILVW 268
>gi|225439751|ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Vitis vinifera]
Length = 749
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 6/197 (3%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK----- 142
K GR + ++E M + S D Y + + + ++ L+E +
Sbjct: 393 KEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTRIGVPA 452
Query: 143 NRYTYGALLNCYCKELMTERALALFEKM-DELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
NR TY LL YC++L ++A L +M D+ + + V++N L + +
Sbjct: 453 NRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAY 512
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
N+M+ R I+ ++Y M++++ +VF EM + K ++ L +
Sbjct: 513 FNEMRARGIAPTKISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLVAWNMLVEAHC 572
Query: 262 KAELFEKAELALKKLEE 278
+ L E+A+ ++++ E
Sbjct: 573 RLGLVEEAKKTVQRMRE 589
>gi|410110137|gb|AFV61148.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rubella]
Length = 440
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 135/302 (44%), Gaps = 7/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + AL ++ ME ++ ++ ++L+ K + A F+ L S + +
Sbjct: 27 KEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 86
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y A++N + K + A +L +M + NT +++ L TMY+ + + + ++M
Sbjct: 87 AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEM 146
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ LD T + + Y L+ +++F+ M + + +++ L +Y AEL
Sbjct: 147 REIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGM-RKMGIEPSVVSFNTLLRVYGDAEL 205
Query: 266 FEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYL 322
F +A + L +L + K ++ Y+ +I +Y T + N + ++S P + +Y
Sbjct: 206 FGEA-IHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 264
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ K+ +D F++ S D L +I AY + + A + + K+
Sbjct: 265 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP 324
Query: 383 AN 384
N
Sbjct: 325 DN 326
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +RYTY L+ + KE + + AL+ +KM++ + G+ V ++NL + +L K
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS 71
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYS 254
+ +++K+ + D + +Y+ + ++ G ++F E + +E + T+YS
Sbjct: 72 IFSRLKRSGFTPD-------LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 124
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKS 312
L ++YV+ + F +A ++ E+K D + +I +Y S +++ WG+ K
Sbjct: 125 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGMRKM 184
Query: 313 TFPPTNTSYLVLLQA 327
P+ S+ LL+
Sbjct: 185 GIEPSVVSFNTLLRV 199
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y L+ +C+ T +A LFE+M + + N V + +L +LR G + L++QM
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ +S D + Y + ++D VF +M E E +Y++L S ++
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI-EHEITPDAISYNSLISGLCRS-- 443
Query: 266 FEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVW 307
+ A+K E+MK + D + F+I L A +VW
Sbjct: 444 -GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 125/300 (41%), Gaps = 11/300 (3%)
Query: 57 GGSVTGAL---NAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVI-EWMESRKMHFSYT 112
G VT A+ NA I G + V L + A E++ E ++S ++ S
Sbjct: 162 AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTV 221
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKM 170
+ + K I AE + +S+ + TY LLN Y M +RA + +M
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 171 DELKFLGNTVAFNNLSTMYLRLGQPEKV-RPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
+ ++N L + R+ P+K +V +M+ R D ++Y ++++ ++
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASN 340
Query: 230 IDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYH 288
R+F EM + TY++L +++ A+ L ++ E+ DR Y
Sbjct: 341 TRKAYRLFEEM-RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 289 FLISLYCNTSNLDAVNRVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
++ C + N+D V+ +++ P SY L+ L + + + FE+ + +
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 93 RHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY--AKNRYTYGAL 150
R A + E M + M + + + + + A+K + ++E + +R Y +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
L+ CK ++A +F M E + + +++N+L + R G+ + L MK +
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 211 SLDNLTY 217
D LT+
Sbjct: 462 CPDELTF 468
>gi|442748377|gb|JAA66348.1| Putative chloroplast [Ixodes ricinus]
Length = 93
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 256 LASIYVKAELFEKAELALKKLEE-MKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTF 314
+ +Y+K+ L EKAE L+KLE+ + DR+ YH L++LY + V R+W I K++F
Sbjct: 1 MVVMYIKSGLLEKAEECLRKLEDVIMGWDRRPYHNLMTLYGTMGREEEVYRIWNIYKASF 60
Query: 315 PPT-NTSYLVLLQALAKLNAIDILKQCF 341
N Y ++ AL + + +L++C
Sbjct: 61 ANIPNYRYHAVISALIRSKTLRVLRRCM 88
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 25/248 (10%)
Query: 97 EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCY 154
E++ ME + S + + ++ A + I AEK + + E + Y Y ++++
Sbjct: 238 EILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWN 297
Query: 155 CKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
C+ RA ALF++M + NT F L + + GQ E L+ +M+ + + L+
Sbjct: 298 CRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNV 357
Query: 215 LTYIVWMQSYS---------HLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + M Y L DI +ER +E TY+ LAS K
Sbjct: 358 VIFNTMMDGYCKRGMMDEAFRLQDI--MERKGFE--------ADVFTYNILASGLCKLHR 407
Query: 266 FEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNR-VWGILKSTFPPTNTSYL 322
+E+A+ L + E + P F I +YC NL R + I K P +Y
Sbjct: 408 YEEAKRVLNVMVEKGVAPNVVTCATF-IEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYN 466
Query: 323 VLLQALAK 330
L+ A +K
Sbjct: 467 TLIDAYSK 474
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 127/334 (38%), Gaps = 38/334 (11%)
Query: 66 AYIMEGKTV---RKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTA 122
++EG++ + + +E CVR R+ +ES ++ + +D+
Sbjct: 146 GLVVEGRSCFXKKCNKVELCVRFFRRM------------VESGRVDIGVQSLTIVVDVLC 193
Query: 123 KTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTV 180
+ + A++ N ++ +TY LLN E + M+ + + V
Sbjct: 194 RRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLV 253
Query: 181 AFNNLSTMYL---RLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVF 237
+ L Y R+G+ EKV +M +RN+ +D Y + ++ +F
Sbjct: 254 TYTILIEWYASSERIGEAEKV---YEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALF 310
Query: 238 YEMCNECEDKCRWT-----TYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHF--L 290
EM CR T+ L S KA E AE+ L+++ + K D F +
Sbjct: 311 DEMI------CRGIVPNTXTFGALISGVCKAGQMEAAEILLEEM-QCKGVDLNVVIFNTM 363
Query: 291 ISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCS 349
+ YC +D R+ I+ + F +Y +L L KL+ + K+ +
Sbjct: 364 MDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGV 423
Query: 350 SYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ ++ I Y Q+ E N +KR
Sbjct: 424 APNVVTCATFIEIYCQEGNLAEPERFLRNIEKRG 457
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 4/177 (2%)
Query: 68 IMEGKTVRKDMLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTN 125
IME K D+ Y + L K RY A V+ M + + + A ++++ +
Sbjct: 382 IMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEG 441
Query: 126 GIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
+A E++ + + N TY L++ Y K ++A L +M E L + +
Sbjct: 442 NLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYT 501
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
+L + + ++ L N+M + I + TY + S D +++ EM
Sbjct: 502 SLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEM 558
>gi|255660944|gb|ACU25641.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 481
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 10/277 (3%)
Query: 76 KDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN 135
+D+ + S K G + ++++ + ME + + + + + A++YFN
Sbjct: 80 EDLWVLMIDSYGKAGIVQESVKMFQKMEELGVXRTIKSYDALFKVILRRGRYMMAKRYFN 139
Query: 136 G-LSE-YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
LSE R+T+ ++ + E + F M + + V +N + Y R+
Sbjct: 140 KMLSEGIEPTRHTFNVMIWGFFLSGKVETSNRFFXDMXSREITPDVVTYNTMINGYYRVB 199
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
+ E+ +MK RNI +TY ++ Y ++ +D + EM K TY
Sbjct: 200 KMEEXEKYFVEMKGRNIEPTVVTYTTLIKGYXSVDRVDBALXLXEEM-KXFGIKPNAITY 258
Query: 254 SNLASIYVKAELFEKAELALKKL--EEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GIL 310
S L AE +A LK++ + P D + LIS C +LDA V ++
Sbjct: 259 STLLPGLCDAEKMSEARSILKEMVXKYXAPTDNSIFMRLISGQCKVGDLDAAADVJKAMI 318
Query: 311 KSTFPPTNTSYLVLLQALAKLN----AIDILKQCFEE 343
+ + P Y VL++ K A+ +L + E+
Sbjct: 319 RLSIPTEAGHYGVLIEXYCKAGQYDKAVKLLDKVIEK 355
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 6/211 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G + A ++++ ++ + ++V++D K+ + A FN L E N
Sbjct: 471 KAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEV 530
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y AL++ +CK + A++L E+M L N+ +N+L + G+ ++ +V M
Sbjct: 531 MYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENM 590
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ + TY + ++ D D RVF +M + K TY+ Y +
Sbjct: 591 SKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVS-FGHKPDVYTYTAFIHTYCTSGN 649
Query: 266 FEKAELALKKLEE--MKPRDRKAYHFLISLY 294
++AE + ++ E + P D Y LIS Y
Sbjct: 650 VKEAEGMMARMIEAGVMP-DSLTYTLLISAY 679
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y LL + LM + ++ +M + N N + Y ++G + V+++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRW--TTYSNLASIYVKA 263
Q +S D+ TY + Y ND++ +VF M N+ CR +Y+ + +A
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK---GCRRNEVSYTTIIHGLCEA 297
Query: 264 ELFEKAELALKKLEEMK--PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTNTSY 321
++ KK+ E P R + +L+ N NL+ ++ + + + P +Y
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTY 357
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
V++ A+ K +D ++ E + + + +IR Y ++ E A I
Sbjct: 358 TVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL 412
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 9/235 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY L+ + K +A+ L KM E K + V +N+L + + G + L+
Sbjct: 423 NERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLL 482
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+ +K+ + D TY V++ + ++ +F + E K Y+ L + K
Sbjct: 483 DLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL-KEKGIKANEVMYTALIDGHCK 541
Query: 263 AELFEKAELALKKLEEMKPRD----RKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPT 317
A K + A+ LE M D Y+ LI C + + ++ V + K PT
Sbjct: 542 A---GKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPT 598
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+Y +L++ + + D + F + S D+ I Y +EA
Sbjct: 599 VATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEA 653
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 107/275 (38%), Gaps = 9/275 (3%)
Query: 68 IMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTN 125
+M K R++ + Y + L + GR + + + M + + + V + +
Sbjct: 274 MMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGND 333
Query: 126 GIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
FN + E + N +TY +++ CKE + + + +M E + + V +N
Sbjct: 334 RNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYN 393
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
L Y G+ E ++ M+ N + TY + +S + + +M E
Sbjct: 394 ALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKML-E 452
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLD 301
+ TY++L + KA F+ A L L+E + P D+ Y I C + ++
Sbjct: 453 SKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVP-DQWTYSVFIDTLCKSKRME 511
Query: 302 AVNRVWGILKSTFPPTN-TSYLVLLQALAKLNAID 335
++ LK N Y L+ K ID
Sbjct: 512 EACDLFNSLKEKGIKANEVMYTALIDGHCKAGKID 546
>gi|449440377|ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
gi|449483612|ref|XP_004156638.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
Length = 736
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK-----NR 144
GR + ++E M ++ S+ D Y + + + ++ L+E + NR
Sbjct: 388 GRVGDTIRMLEAMRNQGDRSSHPDHVSYTTVVSALVKAGSMDRARQVLAEMTRIGCPANR 447
Query: 145 YTYGALLNCYCKELMTERALALFEKM-DELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY LL YC+ L ++A LF++M D + V++N + + + N
Sbjct: 448 ITYNILLKGYCRLLQMDKAKDLFKEMVDGAGIEPDVVSYNIMIDGSILVDDSAGALGFFN 507
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+M+ + I+ ++Y M++++ +VF EM N+ K ++ L Y +
Sbjct: 508 EMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKVDIVAWNMLIEGYCRL 567
Query: 264 ELFEKAELALKKLEE 278
E+A+ ++K++E
Sbjct: 568 GWIEEAKQLVQKMKE 582
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 163/411 (39%), Gaps = 34/411 (8%)
Query: 22 STPTETVS---QRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYI-MEGKTVRKD 77
S+P + S +AA P P + LSALG G++ G + M +V+ D
Sbjct: 109 SSPADAASFLRDSLAAGAPAP--DVSTFNSLLSALG-RAGNLRGMTELFTSMREASVKPD 165
Query: 78 MLEYCV--RSLRKFGRYRHALEVIEWMESRKMHFSYTDFAV---YLDLTAKT----NGIA 128
++ Y + L K G AL+V++ M S D + +D K + I
Sbjct: 166 IVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVC-ADIVILNTVVDGLCKIGRLQDAIV 224
Query: 129 AAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM 188
++ + A N TY L + C+ + A + E+M++ N + N +
Sbjct: 225 FVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGG 284
Query: 189 YLRLGQPEKVRPLVNQMKQRNISL-----DNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
R+G +V ++ +++ + + +TY + ++ H N++ +F+EM ++
Sbjct: 285 LCRVG---RVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQ 341
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAV 303
++ ++ + L + +A + DRKAY+ LI +C L
Sbjct: 342 GYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEA 401
Query: 304 NRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
++++ +K P +Y LL L K + + + ++
Sbjct: 402 HQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHG 461
Query: 363 YLQKDMYEEAALIFNNAKKRANASARFFKSR---ESFMIYYLRSRQLDLAL 410
Y + +EA IF R+ AR + + + + +SR++D+A+
Sbjct: 462 YCKAGKTDEALKIF-----RSMGEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 5/160 (3%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYG 148
R A ++ E M+ + + L K +A ++ + + + T+G
Sbjct: 397 RLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFG 456
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
L++ YCK T+ AL +F M E + NTV +N L + + + L ++M++
Sbjct: 457 TLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREN 516
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC 248
N+ + TY ++ L D + E+ F M E++C
Sbjct: 517 NVPANVTTYNALLKG---LQDKNMPEKAFELMDQMKEERC 553
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 4/158 (2%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+G ++ D+ Y + L K G + E++ M S F + K
Sbjct: 408 MKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGK 467
Query: 127 IAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
A K F + E N Y L++ CK + A+ LF++M E N +N
Sbjct: 468 TDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNA 527
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ 222
L PEK L++QMK+ + D +T V M+
Sbjct: 528 LLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLME 565
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/300 (17%), Positives = 113/300 (37%), Gaps = 7/300 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF----NGLSEYAKN 143
+ G A +++E ME + + + + + AA +F E N
Sbjct: 252 RVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGN 311
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY L++ + A+ LF +M + + + V + + + + G+ +
Sbjct: 312 AVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAA 371
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
MK+ LD Y + + + + ++F EM +T Y+ L S KA
Sbjct: 372 SMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYT-YNTLLSCLCKA 430
Query: 264 ELFEKA-ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSY 321
F EL +++ + L+ YC D +++ + ++ P Y
Sbjct: 431 GDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIY 490
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
L+ L K +D+ + F+E ++ + +++ K+M E+A + + K+
Sbjct: 491 NTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKE 550
>gi|218197431|gb|EEC79858.1| hypothetical protein OsI_21342 [Oryza sativa Indica Group]
Length = 1013
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 4/245 (1%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
A N++TY ++ Y KE M E A+ F +M +F+ ++ L ++ + G+ E+
Sbjct: 272 APNQFTYTVVIGSYAKEGMLEEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALG 331
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L ++MK ++I N T + Y D +F EM + + Y L IY
Sbjct: 332 LYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEM-EQNKIVPDEVIYGILVRIY 390
Query: 261 VKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTN 318
K L+E A+ +++++ D + Y + ++ N N D +V +++ P+
Sbjct: 391 GKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQ 450
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNN 378
SY LL+ +D + F S D+ + ++R Y++ ++A +
Sbjct: 451 FSYSALLRCHVAKEDVDAAEDTFRAL-SNYGPPDVFCCNDLLRLYMRLGHLDKARALILK 509
Query: 379 AKKRA 383
+K A
Sbjct: 510 MRKEA 514
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 94/223 (42%), Gaps = 6/223 (2%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
++S+ + G+ A+ + + M S + S F + + + + + A + F+ E
Sbjct: 723 IKSMLESGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGL 782
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY +L+ Y K A LF +M E ++FN + Y G +
Sbjct: 783 PIDEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEI 842
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC-NECEDKCRWTTYSNLASI 259
+ +M++ N D+ TY+ +++Y+ E M + C T +++L S
Sbjct: 843 IFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSC--THFNHLISA 900
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLD 301
++K ++A+ ++EE P D ++ ++ + +D
Sbjct: 901 FLKEGQIDEAQRMYNQMEEAGIPADLACCRTMMRMHLDHGYVD 943
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 114/311 (36%), Gaps = 63/311 (20%)
Query: 92 YRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALL 151
Y AL+V++ M +R + S ++ L + AAE F LS Y
Sbjct: 431 YDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRALSNYGPP-------- 482
Query: 152 NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR--- 208
+ +C N+L +Y+RLG +K R L+ +M++
Sbjct: 483 DVFC--------------------------CNDLLRLYMRLGHLDKARALILKMRKEALQ 516
Query: 209 ------------------NISLDNLTYIVWMQSYSH--LNDIDGVERVFYEMCNECEDKC 248
N DNLT ++ + S LN D M DK
Sbjct: 517 FDEDLCVTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDS--STLSMMLKSLLDKP 574
Query: 249 RW-TTYSNLASIYVKAELFEKAELALKKLEEM--KPRDRKAYHFLISLYCNTSNLDAVNR 305
++ S L + + ++A+ + L E+ KP D A LI Y L+ +
Sbjct: 575 EGLSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKP-DDTAIATLIVQYGQAQQLEQAQK 633
Query: 306 VWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
++ ++FP + Y ++ AL + + + F E + + D +++ +
Sbjct: 634 LFETASTSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHLTK 693
Query: 366 KDMYEEAALIF 376
++ ++EA I
Sbjct: 694 QEKFQEAENII 704
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 134/348 (38%), Gaps = 21/348 (6%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + Y LL Y + + A F +M + + VA L Y R G+ +
Sbjct: 166 YEPSVVAYTILLRLYGQVGKIKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDML 225
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+++R+I + +++ +M S + G +E E TY+ +
Sbjct: 226 MFYAAVRRRDI-VPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGS 284
Query: 260 YVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-STF 314
Y K + E+A + EMK R + Y LISL + ++ +K +
Sbjct: 285 YAKEGMLEEA---MDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSI 341
Query: 315 PPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
P+N + +L K F E E D + +++R Y + +YE+A
Sbjct: 342 VPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQR 401
Query: 375 IFNNAKKRANASARFFKSRESFMI---YYLRSRQLDLALNEMEAALSEAKQFHWRPMQVT 431
+F K A ++++ ++ + D AL ++A + + +P Q +
Sbjct: 402 MFEEIDK-----AGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAM----RARNVKPSQFS 452
Query: 432 VDTFFRFFEEEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
R ++DVD AE+ + L + D + L++ Y+ G L
Sbjct: 453 YSALLRCHVAKEDVDAAEDTFRALSNYGPPDVFCCNDLLRLYMRLGHL 500
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
+E K +R +++ Y V L R+ A ++ M +K+ + ++ LD K
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A++ F + + + TY +L+N C + A +F+ M L + V++N
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + + + E L +M QR + + +TY +Q + D+D + F +M
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNL 300
WT L + EL E AL E+M+ R D Y +I C T
Sbjct: 396 ISPDIWTYNILLGGLCDNGEL----EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK- 450
Query: 301 DAVNRVWGILKS----TFPPTNTSYLVLLQALA 329
V W + S P +Y ++ L
Sbjct: 451 --VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 10/171 (5%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
+Y L+N +CK E + LF +M + + NTV +N L + + G +K + +QM
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
IS D TY + + +++ +F +M + E TY+ + K
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-QKREMDLDIVTYTTVIRGMCKTGK 450
Query: 266 FEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILK 311
E+A L+LK L KP D Y ++S C L V ++ +K
Sbjct: 451 VEEAWSLFCSLSLKGL---KP-DIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 102/240 (42%), Gaps = 3/240 (1%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y +R T G+L+N +C+ A++L +KM E+ + + VA+N + + +
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
+++++ I + +TY + + + R+ +M + + TYS L
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDA 269
Query: 260 YVK-AELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN 318
+VK ++ E EL + + D Y L++ C +D N+++ ++ S +
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 319 -TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
SY L+ K ++ + F E R + + +I+ + Q ++A F+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 115/295 (38%), Gaps = 15/295 (5%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYG 148
R A+ +++ M + +D KT + A +F + N TY
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
AL+N C A L M + K N + ++ L +++ G+ + + L +M +
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKC--RWTTYSNLASIYVKAELF 266
+I D +TY + + ID ++F M ++ C +Y+ L + + KA+
Sbjct: 290 SIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK---GCLADVVSYNTLINGFCKAK-- 344
Query: 267 EKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSY 321
+ E +K EM R + Y+ LI + ++D + + P +Y
Sbjct: 345 -RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIF 376
+LL L ++ FE+ + R D+ +IR + EEA +F
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 132/343 (38%), Gaps = 55/343 (16%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG-QPEKVR--PL 201
YT+ ++NC+C AL++ KM L+LG +P++V L
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKM-------------------LKLGYEPDRVTIGSL 161
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
VN +RN D ++ + M + DI + +C T N A +
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK--------TKRVNDAFDFF 213
Query: 262 KAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTS 320
K E+ K ++P + Y L++ CN+S DA + ++K P +
Sbjct: 214 K-EIERKG---------IRP-NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y LL A K + K+ FEE D+ ++ D +EA +F+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322
Query: 381 KRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFE 440
+ + S + + + ++++++ + E Q VT +T + F
Sbjct: 323 SKGCLAD--VVSYNTLINGFCKAKRVEDGMK----LFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 441 EEKDVDGAEEFCKVLKSLNCLDFSAYSLLIKTY-IAAGKLASD 482
+ DVD A+EF + +DF S I TY I G L +
Sbjct: 377 QAGDVDKAQEF------FSQMDFFGISPDIWTYNILLGGLCDN 413
>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rotundifolia]
Length = 440
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 134/302 (44%), Gaps = 7/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + AL ++ ME ++ ++ ++L+ K + A F+ L S + +
Sbjct: 28 KEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 87
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y A++N + K + A +L +M + NT +++ L TMY+ + + + ++M
Sbjct: 88 AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEM 147
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ LD T + + Y L +++F+ M + + +Y+ L +Y AEL
Sbjct: 148 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM-RKMGIEPNVVSYNTLLRVYGDAEL 206
Query: 266 FEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYL 322
F +A + L +L + K ++ Y+ ++ +Y T + N + ++S P + +Y
Sbjct: 207 FGEA-IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 265
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ K+ +D F++ S D L +I AY + + A + + K+
Sbjct: 266 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP 325
Query: 383 AN 384
N
Sbjct: 326 DN 327
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +RYTY L+ + KE + + AL+ +KM++ + G+ V ++NL + +L K
Sbjct: 13 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAIS 72
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYS 254
+ +++K+ + D + +Y+ + ++ G ++F E + +E + T+YS
Sbjct: 73 IFSRLKRSGFTPD-------LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 125
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKS 312
L ++YV+ + F +A ++ E+K D + +I +Y +++ WG+ K
Sbjct: 126 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 185
Query: 313 TFPPTNTSYLVLLQA 327
P SY LL+
Sbjct: 186 GIEPNVVSYNTLLRV 200
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 134/302 (44%), Gaps = 7/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + AL ++ ME ++ ++ ++L+ K + A F+ L S + +
Sbjct: 27 KEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 86
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y A++N + K + A +L +M + NT +++ L TMY+ + + + ++M
Sbjct: 87 AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEM 146
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ LD T + + Y L +++F+ M + + +Y+ L +Y AEL
Sbjct: 147 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM-RKMGIEPNVVSYNTLLRVYGDAEL 205
Query: 266 FEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYL 322
F +A + L +L + K ++ Y+ ++ +Y T + N + ++S P + +Y
Sbjct: 206 FGEA-IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 264
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ K+ +D F++ S D L +I AY + + A + + K+
Sbjct: 265 TIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP 324
Query: 383 AN 384
N
Sbjct: 325 DN 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +RYTY L+ + KE + + AL+ +KM++ + G+ V ++NL + +L K
Sbjct: 12 SPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAIS 71
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYS 254
+ +++K+ + D + +Y+ + ++ G ++F E + +E + T+YS
Sbjct: 72 IFSRLKRSGFTPD-------LVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 124
Query: 255 NLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKS 312
L ++YV+ + F +A ++ E+K D + +I +Y +++ WG+ K
Sbjct: 125 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 184
Query: 313 TFPPTNTSYLVLLQA 327
P SY LL+
Sbjct: 185 GIEPNVVSYNTLLRV 199
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 91/207 (43%), Gaps = 9/207 (4%)
Query: 142 KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPL 201
+N TY +++ Y K L E+A L ++M N++ ++ + +++ ++G+ ++ L
Sbjct: 223 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 282
Query: 202 VNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYV 261
+++ + +D + + + +Y + +R+ +E+ ++ R T LA
Sbjct: 283 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHEL-KRPDNIPRDTAIHILAG--- 338
Query: 262 KAELFEKAELALKK-LEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST--FPPTN 318
A E+A ++ ++ + +D + +I L V V+ ++ FP ++
Sbjct: 339 -AGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSD 397
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWE 345
+V L A KL D + E +
Sbjct: 398 VIAIV-LNAYGKLQEFDKANDVYMEMQ 423
>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 728
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/344 (18%), Positives = 143/344 (41%), Gaps = 35/344 (10%)
Query: 125 NG-IAAAEKYFNGLSEYAK--NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
NG + AE F+ L K + + Y ++N Y + M E A+ +++ M+E L +
Sbjct: 394 NGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYT 453
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
++++ M + P + + +++ ++ LD + + + + ++ + ++F EM
Sbjct: 454 YHSMLRMCQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMI 513
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYC---NTS 298
+ T++ + +Y KA + E+A ALK ++ D+ ++ L+ Y +
Sbjct: 514 DVGYVPYN-ITFNVMIDLYGKAGMPERAHKALKLAQQFGSADKISFSTLVHAYAKKQDFP 572
Query: 299 NLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADV 358
N++A +W + + + + +Y +L A K ++ + E+ D+ ++
Sbjct: 573 NMEAA--LWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNI 630
Query: 359 IIRAYLQKDMYEEAALIFNNAKKRANASARF----------FKSRESFMIYYLRSRQLDL 408
+I Y + M E +F ++ R+ F +Y+ ++ Q
Sbjct: 631 LINTYGKNYMIAEMETLFRTMQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQ--- 687
Query: 409 ALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFC 452
+A +S P +VT FE ++D A +C
Sbjct: 688 -----DAGIS--------PDRVTYMILVSTFERAGNIDEAARWC 718
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 5/195 (2%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAK-NRYTYGALLNCYCKELMTERALALFEKMDE 172
F V +DL K A K ++ ++ ++ L++ Y K+ A +M
Sbjct: 524 FNVMIDLYGKAGMPERAHKALKLAQQFGSADKISFSTLVHAYAKKQDFPNMEAALWEMQN 583
Query: 173 LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDG 232
+ + A+N++ Y + GQ EKV ++ +M+ + +D +Y + + +Y I
Sbjct: 584 AGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAE 643
Query: 233 VERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFL 290
+E +F M E RW TY+ + Y A+ ++A K +++ + P DR Y L
Sbjct: 644 METLFRTMQEEGVVPDRW-TYNTIIRTYGFADYPDRAVYWFKAMQDAGISP-DRVTYMIL 701
Query: 291 ISLYCNTSNLDAVNR 305
+S + N+D R
Sbjct: 702 VSTFERAGNIDEAAR 716
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 7/267 (2%)
Query: 119 DLTAKTNGIAAAEKYFNGLSEYAKNR--YTYGALLNCYCKELMTERALALFEKMDELKFL 176
D + I AE+ + + E + Y +++ Y K + ++A L EKM E +
Sbjct: 144 DTYGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLV 203
Query: 177 GNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 236
+++ ++ + R+G+ ++ +MK+ I + + + Y D++G+ RV
Sbjct: 204 PDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISPYGKAKDVEGIVRV 263
Query: 237 FYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLY- 294
EM + K W T Y +A L + L L + + +Y L+ +Y
Sbjct: 264 ITEM-KKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYL 322
Query: 295 -CNTSNLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDM 353
CN +A+ + K+ P L+ D K F+E + + +
Sbjct: 323 KCNLPK-EALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSL 381
Query: 354 RLADVIIRAYLQKDMYEEAALIFNNAK 380
+ +I Y +EA +F++ +
Sbjct: 382 ESSCTMIYVYGMNGDVKEAEGLFHSLR 408
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 116/301 (38%), Gaps = 48/301 (15%)
Query: 81 YCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEY 140
YC++ G + A ++E M++ + + + + + I A YF+ + E
Sbjct: 799 YCLK-----GEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED 853
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTM--YLRLGQPEKV 198
++ +Y L+ +E+AL L M + G+ A N ++ M + G PE
Sbjct: 854 CRDEISYNTLITSLVASRRSEQALELLRAM--VADGGSPDACNYMTVMDGLFKAGSPEVA 911
Query: 199 RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
L+ +M+ R S D TY + + S + F EM
Sbjct: 912 AKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEM------------------ 953
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPT 317
L+K +KP D Y LI +C D V+ W +L+S+ PT
Sbjct: 954 --------------LRK--NLKP-DAIVYSSLIDAFCKA---DKVDDAWKLLRSSGIEPT 993
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
T Y ++ +L K D + E +S+ + + + AY+ + +EA + N
Sbjct: 994 ITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVN 1053
Query: 378 N 378
+
Sbjct: 1054 D 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 121/342 (35%), Gaps = 39/342 (11%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
V L K G R AL ++E+M + F LD K I A F E
Sbjct: 480 VTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 539
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
N TY L++ K + AL L KM EL NTV ++ + L++G+ E
Sbjct: 540 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 599
Query: 201 LVNQMKQRNISLDNLTYIVWMQSY---SHLNDIDGVERVFYEM---------CNECEDKC 248
++ QM+ D +TY + + L + G+ R E C C
Sbjct: 600 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 659
Query: 249 R----------------------WTTYSNLASIYVKAELFEKAELALKKL--EEMKPRDR 284
R TYS++ KA +A +K+ +E+
Sbjct: 660 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719
Query: 285 KAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
AY LI C +D A + ++++ P ++ +L+ L ID + F
Sbjct: 720 IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANA 385
R D+ + +I AY K + A + K A
Sbjct: 780 MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIA 821
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 109/308 (35%), Gaps = 78/308 (25%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--Y 140
V L K GR A V++ + + F + +D +K + A ++F+ + +
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242
Query: 141 AKNRYTYGALLNCYCKELMTERALALF----------------------EKMDE------ 172
+ N TY AL++ CK + AL L +++E
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLK 302
Query: 173 -LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+ + N V FN+L + + ++ L + MK+ S D +TY + ++ L I
Sbjct: 303 AMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRI- 361
Query: 232 GVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDRKAYHFLI 291
E + EL +++ E P + + LI
Sbjct: 362 -------------------------------PEAYRHVEL-MRRTEGCSP-NVVTFSTLI 388
Query: 292 SLYCNTSNLDAVNRVWGILK-----STFPPTNTSYLVLLQALAKLNAIDILKQCFE---- 342
CN VN+ W + + P +Y LL+ L K L+QCFE
Sbjct: 389 QGLCNAGR---VNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445
Query: 343 -EWESRCS 349
EW S S
Sbjct: 446 REWRSSSS 453
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 128/341 (37%), Gaps = 13/341 (3%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L+ K M AL L E M E + + FN++ + + + +
Sbjct: 475 TYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA 534
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCR--WTTYSNLASIYVKA 263
+R + +TY + S + +D ++ +M E CR TYS + +K
Sbjct: 535 LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM---VELGCRANTVTYSTVVDGLLKV 591
Query: 264 ELFEKAELALKKLEEMKP-RDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSY 321
E A + L+++ + D Y+ LI + L +AV + +L++ F P+ +Y
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651
Query: 322 LVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK 381
L L + D + + +R + + I+ + EA F
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK-MA 710
Query: 382 RANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEE 441
R A + + + ++ ++D A +E + + P VT +
Sbjct: 711 RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI----PDVVTFSILINGLCD 766
Query: 442 EKDVD-GAEEFCKVLKSLNCLDFSAYSLLIKTYIAAGKLAS 481
+D G E FC + + D AY+ +I Y G+ ++
Sbjct: 767 AGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSA 807
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 122/309 (39%), Gaps = 28/309 (9%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVY-------------LDLTAKTNGIAAAEKYFNGL 137
R + ALE++ M + S D Y LTA+ A +K L
Sbjct: 178 RSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQ-----AMDKAMEVL 232
Query: 138 SEYAKNRY-----TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRL 192
+ KN TY ++L+ YC + A+ +KM N V +++L +
Sbjct: 233 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 292
Query: 193 GQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTT 252
G+ + R + + M +R + D TY +Q + + E++F M K T
Sbjct: 293 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMV-RIGVKPDIIT 351
Query: 253 YSNLASIYVKAELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNL-DAVNRVWGI 309
Y+ L A ++A L + +KP D Y LI+ YC S + DA+ +
Sbjct: 352 YNTLIDGCCLAGKMDEATKLLASMVSVGVKP-DIVTYGTLINGYCRVSRMDDALALFKEM 410
Query: 310 LKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMY 369
+ S P +Y ++LQ L K+ + + ++ ++I+ + ++
Sbjct: 411 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLT 470
Query: 370 EEAALIFNN 378
+EA +F N
Sbjct: 471 DEALRMFQN 479
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/289 (18%), Positives = 111/289 (38%), Gaps = 13/289 (4%)
Query: 86 LRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KN 143
L K GR A ++ + M R + + L K + +EK F+ + +
Sbjct: 289 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPD 348
Query: 144 RYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVN 203
TY L++ C + A L M + + V + L Y R+ + + L
Sbjct: 349 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 408
Query: 204 QMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA 263
+M +S + +TY + +Q H + ++ + + + +TY+ + K
Sbjct: 409 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI-TKSGTQLELSTYNIILHGLCKN 467
Query: 264 ELFEKA-----ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FPPT 317
L ++A L L L+ + + ++ +I +D ++ + P
Sbjct: 468 NLTDEALRMFQNLCLTDLQ----LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD 523
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
+Y ++ + L + +++ L F E S D R+ + I+R LQ+
Sbjct: 524 VRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 572
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 106/271 (39%), Gaps = 16/271 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME VR D + Y V L GR+ A ++ M R + + F +D+ K
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A K + ++ + +TY +L+N C + A + + M L + V +N
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + + + ++ L +M QR + D +TY +Q Y D + +F M
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---- 375
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAV 303
+ + TYS L EKA + + +++ + D Y+ +I C N V
Sbjct: 376 DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN---V 432
Query: 304 NRVWGILKS----TFPPTNTSYLVLLQALAK 330
W + +S P SY ++ +
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 11/251 (4%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + T +L+N +C+ A+ L KM+E+ F + V +N + ++G
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L ++M++ + D +TY + R+ +M + T++ + +
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDV 253
Query: 260 YVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGIL--KST 313
+VK F + A+K EEM R D Y+ LI+ C +D ++ ++ K
Sbjct: 254 FVKEGKFSE---AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P T Y L+ K +D + F E R D + II+ Y Q + A
Sbjct: 311 LPDVVT-YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 374 LIFNNAKKRAN 384
IF+ R N
Sbjct: 370 EIFSRMDSRPN 380
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/404 (18%), Positives = 153/404 (37%), Gaps = 49/404 (12%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
+ L K G + A +++ ME + +++ +D K + A N + + +
Sbjct: 185 MNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSI 244
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ +TY L++ CK E LF +M L N FN++ + G+ E
Sbjct: 245 PPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEE 304
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
++ M ++ + D +TY + + Y +D +F M N+ + N+ S
Sbjct: 305 IMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK-------SIEPNIIS-- 355
Query: 261 VKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNT 319
Y+ LI+ Y +D +V I + P+
Sbjct: 356 --------------------------YNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNA 379
+ VLL L +L + F+E S D+ ++ Y + + EEA F+
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449
Query: 380 KKRANASARFFKSRESFMIYYLRSRQL--DLALNEMEAALSEAKQFHWRPMQVTVDTFFR 437
++R + + IY L + L++ A + P +T
Sbjct: 450 ERR--------REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMIS 501
Query: 438 FFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKLA 480
+ +E +D A++ + ++ CL D Y+++++ ++ + K++
Sbjct: 502 GYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVS 545
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 7/227 (3%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N YG ++N CK+ T++A L M++ NT ++ + + + G + L+
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLL 236
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--NECEDKCRWTTYSNLASIY 260
N+MKQ++I D TY + + L+ + V +F EM N + C T++++
Sbjct: 237 NEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVC---TFNSVIDGL 293
Query: 261 VKAELFEKAELALK-KLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTN 318
K E AE ++ +E+ D Y+ +I Y +D ++ ++ + P
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNI 353
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQ 365
SY +L+ A+ ID Q E + + +V++ +
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 119/309 (38%), Gaps = 7/309 (2%)
Query: 69 MEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
M+ K++ D+ Y + +L K ++ + + M ++ + F +D K
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ AE+ + E + TY +++ Y +RA +F+ M N +++N
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNI 358
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L Y R + ++ + ++ Q+ + +T V + L + F EM +
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAV 303
+ T+ L Y K L E+A KLE + + + Y +I C LD
Sbjct: 419 HIPDLY-THCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA 477
Query: 304 NRVWGILKST-FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRA 362
+ + L P +Y ++ + +D K + E D R +VI+R
Sbjct: 478 HATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRG 537
Query: 363 YLQKDMYEE 371
+L+ + E
Sbjct: 538 FLRSNKVSE 546
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 132/345 (38%), Gaps = 34/345 (9%)
Query: 52 ALGATGGSVTGALNAYIMEG--KTVRKDMLEYCVRSLRKFGRYRHAL------------- 96
ALG+ GSV+ + +++G K+ R D + + + G +AL
Sbjct: 4 ALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQK 63
Query: 97 ------EVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGAL 150
E++E ME+ + A D T E NG+ N TYG L
Sbjct: 64 DDGRVQEILEIMENEGIE------ATVGDGTCGGPPKVLDECVGNGVE---PNERTYGVL 114
Query: 151 LNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNI 210
+N +CK E A L M N + FN + Y R G + + M++ +
Sbjct: 115 INGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGV 174
Query: 211 SLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK-AELFEKA 269
LD TY +N +D + + + M E + TY+ L SI+ K ++ E
Sbjct: 175 ELDIYTYNTLACGLCRVNRLDEAKTLLHIMI-EMGVVPNYVTYTTLISIHCKDGDMVEAR 233
Query: 270 ELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLVLLQAL 328
L + E+ Y+ +I Y ++ R + K F P +Y L+
Sbjct: 234 RLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGH 293
Query: 329 AKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
+D+ + FEE + R + ++ +I L K+ EAA
Sbjct: 294 CVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG-LAKEGRSEAA 337
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 109/294 (37%), Gaps = 8/294 (2%)
Query: 113 DFAVYLDLTAKTNGIAAAEKYFNG---LSEYAKNRYTYGALLNCYCKELMTERALALFEK 169
D+ + L + A A + F G A TY ++N CK + LFE+
Sbjct: 3 DYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEE 62
Query: 170 MDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLND 229
+ E + V +N L + G E+ R L M R + +TY V + +
Sbjct: 63 LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122
Query: 230 IDGVERVFYEMCNE-CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR---DRK 285
ID + EM + C+ TY++ K + +A ++ L + R D
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182
Query: 286 AYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEW 344
+ LI C +D V+ ++ + P +Y L+ L K + ++ E
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242
Query: 345 ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMI 398
+ + D+ V++ A+ + +EA + + R + +F I
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 79/218 (36%), Gaps = 2/218 (0%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFN--GLSEYAKNRY 145
K G + A + E M ++ + F +D K + AA + G N
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 362
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY AL++ CK E A E+M + +++ + +L R + + LV+++
Sbjct: 363 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 422
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K D +TY + + + V EM + +T + + ++ L
Sbjct: 423 KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNL 482
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAV 303
EL L + D ++ C + LD V
Sbjct: 483 AGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDV 520
>gi|168012907|ref|XP_001759143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689842|gb|EDQ76212.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 124/296 (41%), Gaps = 25/296 (8%)
Query: 96 LEVIEWMESRKMHFSYTD--FAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRYTYGALL 151
LEV WM+ R+ +++ D +A + ++ K + A FN + S + Y AL+
Sbjct: 98 LEVFRWMQ-RQKWYNHDDGFYAKLIVISGKARDLRMAVWLFNEVKRSGSRPDSSLYNALI 156
Query: 152 NCYC----KELMTERALALFEKMDE-LKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMK 206
Y K E A+ LFEKM + K N V +N L +LG +V +M+
Sbjct: 157 TAYLHSRDKGRGFEAAMKLFEKMKQKPKCQPNLVTYNILLRASAQLGDVVQVDRFFKEME 216
Query: 207 QRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELF 266
I D +TY + +Y+ D +E + M + K T + L Y + + F
Sbjct: 217 AAKIYPDLVTYNGVIGAYAEAGDYVQMEMTLFVMRIQKHIKPDNVTSNTLIGAYGRGKDF 276
Query: 267 EKAE-------LALKKLEEMKPRDR---KAYHFLISLYCNTSNLDAVNRVWGILK---ST 313
K E LK + K + R K Y+ L+S Y +++ N +W + ++
Sbjct: 277 VKMEQVVSLFTAVLKSMTGSKSKHRPDLKTYNLLMSSYARAQDME--NMLWSFSRMEEAS 334
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMY 369
F P S+ +L+ + + +++CF + + +I AY + + +
Sbjct: 335 FKPNFRSFEILMYGFGGVGDFEKMRECFHQMLEASIKPQTSTLNTMISAYCKHNFF 390
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 11/228 (4%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YT+ L++ +CKE + A +F M + N V +N+L Y + + K + N
Sbjct: 280 YTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNT 339
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEM-CNECEDKCRWTTYSNLASIYVKA 263
M Q ++ D +Y + + + + +D ++F EM C + TY++L K+
Sbjct: 340 MAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPD--VVTYNSLIDGLCKS 397
Query: 264 ELFEKAELALKKLEEM----KPRDRKAYHFLISLYCNTSNLD-AVNRVWGILKSTFPPTN 318
+ ALK + EM +P + Y+ L+ C ++D A+ + + P+
Sbjct: 398 ---GRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSV 454
Query: 319 TSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQK 366
+Y +L+ L K + ++ FE+ + D+ + +I+ + +K
Sbjct: 455 CTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKK 502
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 19/264 (7%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYAK 142
+ L K G+ + ALE++ ++ + + + +D K + A F+ SE
Sbjct: 181 INGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDA---FDFYSEMVA 237
Query: 143 NR-----YTYGALLNCYCKELMTERALALFEKMDELKFLGNTV-AFNNLSTMYLRLGQPE 196
R TY L+ C + A+ L KM L+ + TV F+ L + + G+ +
Sbjct: 238 KRICPTVVTYNTLICGLCIMGQLKDAIGLLHKM-ILENINPTVYTFSILVDAFCKEGKVK 296
Query: 197 KVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNL 256
+ + + M ++++ + +TY M Y +N+++ E +F M + +YS +
Sbjct: 297 EAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMA-QIGVAPDVHSYSIM 355
Query: 257 ASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKS 312
S + K ++ ++ A+K EEM + D Y+ LI C + + ++ G +
Sbjct: 356 ISGFCKIKMVDE---AMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHD 412
Query: 313 TF-PPTNTSYLVLLQALAKLNAID 335
PP +Y LL AL K + +D
Sbjct: 413 RGQPPNIITYNSLLDALCKNHHVD 436
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 25 TETVSQRIAAPTPFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVR 84
+E V++RI PT + L L +G ++ G L+ I+E V
Sbjct: 233 SEMVAKRIC-PT---VVTYNTLICGLCIMGQLKDAI-GLLHKMILENINPTVYTFSILVD 287
Query: 85 SLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAK 142
+ K G+ + A V M + + + + ++ N + AE FN +++ A
Sbjct: 288 AFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAP 347
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
+ ++Y +++ +CK M + A+ LFE+M + + V +N+L + G+ L+
Sbjct: 348 DVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLI 407
Query: 203 NQMKQRNISLDNLTY 217
+M R + +TY
Sbjct: 408 GEMHDRGQPPNIITY 422
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 33/249 (13%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY LLN CK +E + +F+ M E N + +N + + + L+ +M
Sbjct: 577 TYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEM 636
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
K + ++ D +++ + + + D+DG +F M + + TY+ + S + +
Sbjct: 637 KSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQ-- 694
Query: 266 FEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGIL----KSTFPPT 317
++AL+ EMK D Y LI +C T N VN+ + L + F P+
Sbjct: 695 -LNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGN---VNQGYKFLLENIEKGFIPS 750
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
T++ +L L C + ++ A II +QKD+ +
Sbjct: 751 LTTFGRVLNCL-------------------CVEHKVQEAVGIIHLMVQKDIVPDTVNTIF 791
Query: 378 NAKKRANAS 386
A K+ + +
Sbjct: 792 EADKKGHIT 800
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLN 152
A+E++ M S+ M + L+ KT + F ++E A N TY ++
Sbjct: 559 AIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIE 618
Query: 153 CYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM-KQRNIS 211
C A+ L +M + V+F L T + ++G + L M KQ ++S
Sbjct: 619 SLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVS 678
Query: 212 LDNLTYIVWMQSYSHLNDIDGVERVFYEM 240
TY + + ++S ++ R+F EM
Sbjct: 679 HTTATYNIIISAFSEQLNMKMALRLFSEM 707
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 106/271 (39%), Gaps = 16/271 (5%)
Query: 69 MEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNG 126
ME VR D + Y V L GR+ A ++ M R + + F +D+ K
Sbjct: 141 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 200
Query: 127 IAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNN 184
+ A K + ++ + +TY +L+N C + A + + M L + V +N
Sbjct: 201 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 260
Query: 185 LSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNEC 244
L + + + ++ L +M QR + D +TY +Q Y D + +F M
Sbjct: 261 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---- 316
Query: 245 EDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDAV 303
+ + TYS L EKA + + +++ + D Y+ +I C N V
Sbjct: 317 DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN---V 373
Query: 304 NRVWGILKS----TFPPTNTSYLVLLQALAK 330
W + +S P SY ++ +
Sbjct: 374 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 404
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 11/251 (4%)
Query: 140 YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVR 199
Y + T +L+N +C+ A+ L KM+E+ F + V +N + ++G
Sbjct: 76 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 135
Query: 200 PLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASI 259
L ++M++ + D +TY + R+ +M + T++ + +
Sbjct: 136 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDV 194
Query: 260 YVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGIL--KST 313
+VK F + A+K EEM R D Y+ LI+ C +D ++ ++ K
Sbjct: 195 FVKEGKFSE---AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 251
Query: 314 FPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAA 373
P T Y L+ K +D + F E R D + II+ Y Q + A
Sbjct: 252 LPDVVT-YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 310
Query: 374 LIFNNAKKRAN 384
IF+ R N
Sbjct: 311 EIFSRMDSRPN 321
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 134/302 (44%), Gaps = 7/302 (2%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGL--SEYAKNRY 145
K G + AL ++ ME ++ ++ ++L+ K + A F+ L S + +
Sbjct: 11 KEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLV 70
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
Y A++N + K + A +L +M + NT +++ L TMY+ + + + ++M
Sbjct: 71 AYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEM 130
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
++ LD T + + Y L +++F+ M + + +Y+ L +Y AEL
Sbjct: 131 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM-RKMGIEPNVVSYNTLLRVYGDAEL 189
Query: 266 FEKAELALKKLEEMKPRDRKA--YHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYL 322
F +A + L +L + K ++ Y+ ++ +Y T + N + ++S P + +Y
Sbjct: 190 FGEA-IHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYS 248
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
++ K+ +D F++ S D L +I AY + + A + + K+
Sbjct: 249 TIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP 308
Query: 383 AN 384
N
Sbjct: 309 DN 310
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY L+ + KE + + AL+ +KM++ + G+ V ++NL + +L K + +++
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYE---MCNECEDKC---RWTTYSNLASI 259
K+ + D + +Y+ + ++ G ++F E + E + T+YS L ++
Sbjct: 61 KRSGFTPD-------LVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTM 113
Query: 260 YVKAELFEKAELALKKLEEMK-PRDRKAYHFLISLYCNTSNLDAVNRV-WGILKSTFPPT 317
YV+ + F +A ++ E+K D + +I +Y +++ WG+ K P
Sbjct: 114 YVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 173
Query: 318 NTSYLVLLQA 327
SY LL+
Sbjct: 174 VVSYNTLLRV 183
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 123/289 (42%), Gaps = 11/289 (3%)
Query: 91 RYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYG 148
+ A V+ M + ++ F+ L+ + I A K F+ + + Y + TY
Sbjct: 27 HFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYS 86
Query: 149 ALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQR 208
++N CK T A+ L +KM+E N V ++ + + + +++M R
Sbjct: 87 TIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR 146
Query: 209 NISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC--NECEDKCRWTTYSNLASIYVKAELF 266
IS + +TY + + +L + +F +M N D T++ L K +
Sbjct: 147 GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPD---TVTFNILVDGLSKEGMI 203
Query: 267 EKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL-KSTFPPTNTSYLV 323
+A+ + + E ++P + Y+ L+ YC+ S +D +++ I+ + P+ SY +
Sbjct: 204 LEAQCVFETMIEKGVEP-NVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNI 262
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
L++ K ID K E + + D +++ + Q ++A
Sbjct: 263 LIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDA 311
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 145/358 (40%), Gaps = 32/358 (8%)
Query: 137 LSEYAKNRYTYGALLNCYCKELMT--ERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQ 194
LS + YT L+NC+C A ++ M +L N V F ST+ L
Sbjct: 3 LSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTF---STLLNGLSS 59
Query: 195 PEKV---RPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDK-CR- 249
K+ L ++M + D +TY + + G + ++ + E+K C+
Sbjct: 60 KAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKM----GSTTMAIQLLKKMEEKGCKP 115
Query: 250 -WTTYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVN 304
YS + K +L + A++ L EM R + Y ++ +CN +
Sbjct: 116 NVVVYSTIIDSLCKDKLITE---AMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEAT 172
Query: 305 RVWG-ILKSTFPPTNTSYLVLLQALAKLNAIDILKQC-FEEWESRCSSYDMRLADVIIRA 362
++ +++ P ++ +L+ L+K I + QC FE + ++ + ++
Sbjct: 173 SLFKQMVERNVMPDTVTFNILVDGLSKEGMI-LEAQCVFETMIEKGVEPNVNTYNALMDG 231
Query: 363 YLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQ 422
Y + +EA +FN ++ A + +S + + +S ++D E + L+E
Sbjct: 232 YCSQSQMDEAQKLFNIMVRKGCAPS--VRSYNILIKGHCKSGRID----EAKGLLAEMSH 285
Query: 423 FHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNCL-DFSAYSLLIKTYIAAGKL 479
P VT T + F ++ A++ + ++S L D YS+++ G L
Sbjct: 286 KALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHL 343
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 13/298 (4%)
Query: 58 GSVTGALNAYIMEGKTVRKDMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFA 115
G + AL Y D L Y V L K GR R A++V++ M S + T
Sbjct: 129 GRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLT 188
Query: 116 VYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDEL 173
V + + + A + + A N TY AL++ CK + A+AL + E+
Sbjct: 189 VVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALL--LGEV 246
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
G T ST+ L + ++R V+ ++ + + +TY + Y D+D
Sbjct: 247 TRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEA 306
Query: 234 ERVFYEMCNECEDKC--RWTTYSNLASIYVKAELFEKA-ELALKKLEEMKPRDRKAYHFL 290
R+ +M +D C TY+ L S + K + A EL + + D + L
Sbjct: 307 IRLLGKM---VDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 363
Query: 291 ISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESR 347
+ C + DA+ + I + PPT +Y ++ K N + ++ ++ SR
Sbjct: 364 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSR 421
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 96/243 (39%), Gaps = 16/243 (6%)
Query: 114 FAVYLDLTAKTNGIAAAEKYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDEL 173
++ +D K + A F +S A TY +L+ YC+ + A+ L KM +
Sbjct: 258 YSTVIDGLCKAGRLRDAVDIFEEMS-CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 316
Query: 174 KFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGV 233
+ + + L + + ++G+ + L QM +S D +T+ + ++
Sbjct: 317 NCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 376
Query: 234 ERVFYEMCNECEDKCRWT--TYSNLASIYVKAELFEKAELALKKLEEMKPR----DRKAY 287
+ E+ C T TY+ + Y K+ KAE + + + + R + Y
Sbjct: 377 LELLEEITRR---GCPPTIYTYNCVVDGYCKSNQVRKAE---ELVADFRSRGFVPNTVTY 430
Query: 288 HFLISLYCNTSNLDAVNRVWGILKSTFPPTNTS---YLVLLQALAKLNAIDILKQCFEEW 344
+ L++ C D + L S P TS Y ++L AL + D Q +EE
Sbjct: 431 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490
Query: 345 ESR 347
R
Sbjct: 491 IQR 493
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 9/246 (3%)
Query: 141 AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ N Y L++ CK ERA F+KM E+ + N F L + G +
Sbjct: 194 SPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFD 253
Query: 201 LVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIY 260
L +MK + + TY M Y I +F EM E + TY+ L
Sbjct: 254 LFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEM-RERGVEANVVTYNTLIGGM 312
Query: 261 VKAELFEKAELALKKLEEMK----PRDRKAYHFLISLYCNTSNLDAVNRVWGILKST-FP 315
+ E +AE K +++MK + Y+ LI +C+ NLD + + LKS
Sbjct: 313 CREERVWEAE---KLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLS 369
Query: 316 PTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALI 375
P+ +Y +L++ +K + E E R S V+I AY++ E+A I
Sbjct: 370 PSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQI 429
Query: 376 FNNAKK 381
+++ +K
Sbjct: 430 YSSMEK 435
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 123 KTNGIAAAEKY-FNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
K +G EK NGL N YTY L+N YC E RA LF++M E N V
Sbjct: 248 KKDGFDLFEKMKINGL---FPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVT 304
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDID 231
+N L R + + LV+QMK+ +S + +TY + + + ++D
Sbjct: 305 YNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLD 354
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 4/167 (2%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N TY L+ C+E A L ++M + N + +N L + +G +K L+
Sbjct: 301 NVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLL 360
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
+Q+K +S +TY + ++ YS + GV + EM + T + L YV+
Sbjct: 361 DQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSK-VTCTVLIDAYVR 419
Query: 263 AELFEKAELALKKLEE--MKPRDRKAYHFLISLYCNTSNLDAVNRVW 307
+ EKA +E+ + P D Y LI C N+ ++++
Sbjct: 420 LQEMEKAFQIYSSMEKFGLVP-DVYVYGVLIHGLCMKGNMKESSKLF 465
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 144/343 (41%), Gaps = 16/343 (4%)
Query: 143 NRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLV 202
N + LLN CK E+AL + ++M E ++ ++ L + R + L+
Sbjct: 345 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 404
Query: 203 NQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK 262
++MK+R ++ LTY V + ++ G + EM K Y+ L + + K
Sbjct: 405 DEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN-GLKPNAVVYTTLMTAHAK 463
Query: 263 AELFEKAELALKKLEEMKP-RDRKAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTS 320
E++ + L+++ E D Y+ LI +C + +A + +L+ P +
Sbjct: 464 EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHT 523
Query: 321 YLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAK 380
Y + +K ++I + F E S ++ + +I + ++ EA +F
Sbjct: 524 YGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF---- 579
Query: 381 KRANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFE 440
R S R + +++ + + + ++E SE ++ P T ++
Sbjct: 580 -RFILSRRVLQDVQTYSV-LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 637
Query: 441 EEKDVDGA----EEFCKVLKSLNCLDFSAYSLLIKTYIAAGKL 479
++ +VD A EE C +K +N D Y++LI AG++
Sbjct: 638 KQGNVDKASQLLEEMC--IKGIN-PDIVTYNILIDGLCKAGEI 677
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 113/263 (42%), Gaps = 4/263 (1%)
Query: 88 KFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRY 145
K G A V ++ SR++ ++V + ++ + A F+ L E N +
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627
Query: 146 TYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQM 205
TY +L++ CK+ ++A L E+M + V +N L + G+ E+ + L + +
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687
Query: 206 KQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAEL 265
+ R ++ + +TY + Y + ++ EM + Y+ + + K E
Sbjct: 688 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF-IYNVILNFCCKEEK 746
Query: 266 FEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVL 324
FEKA +++ E +++ LI YC + L N + +++ F P + +Y L
Sbjct: 747 FEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 806
Query: 325 LQALAKLNAIDILKQCFEEWESR 347
+ K + K+ + E + R
Sbjct: 807 IDHNCKAGMMGEAKRLWLEMQER 829
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 121/299 (40%), Gaps = 17/299 (5%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAA-----EKYFNGLSEYAKNRYTYGA 149
A E+++ M+ RK+ + ++V ++ + + E NGL N Y
Sbjct: 400 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK---PNAVVYTT 456
Query: 150 LLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRN 209
L+ + KE E + + E+M E L + +N+L + + + E+ R + +M +R
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516
Query: 210 ISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVK-AELFEK 268
+ + TY ++ YS +++ +R F EM + C Y+ L + K + E
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS-CGVLPNVGIYTALIEGHCKEGNVTEA 575
Query: 269 AELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGIL----KSTFPPTNTSYLVL 324
+ L +D + Y LI S ++ +GI + P +Y L
Sbjct: 576 FSVFRFILSRRVLQDVQTYSVLIH---GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 632
Query: 325 LQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRA 383
+ K +D Q EE + + D+ +++I + E A +F++ + R
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 122/284 (42%), Gaps = 17/284 (5%)
Query: 98 VIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYC 155
++E +E R ++T + ++D +K + A++YFN + N Y AL+ +C
Sbjct: 509 LMEMLERRLRPNAHT-YGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 567
Query: 156 KELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNL 215
KE A ++F + + L + ++ L R G+ + + ++++++ + +
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627
Query: 216 TYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKK 275
TY + ++D ++ EMC + + TY+ L KA E+A+
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINP-DIVTYNILIDGLCKAGEIERAKNLFDD 686
Query: 276 LE--EMKPRDRKAYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNTSYLVLLQALAK-- 330
+E + P + Y ++ YC + N A ++ +L PP Y V+L K
Sbjct: 687 IEGRGLTP-NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEE 745
Query: 331 --LNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
A+D+ ++ E+ + S+ + +I Y + +EA
Sbjct: 746 KFEKALDLFQEMLEKGFASTVSF-----NTLIEGYCKSGKLQEA 784
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 95 ALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA-KNRYTYGALLNC 153
A +++E M R + + V L+ K A F + E + ++ L+
Sbjct: 715 AFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEG 774
Query: 154 YCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLD 213
YCK + A L E+M E +F+ N V + +L + G + + L +M++RN+
Sbjct: 775 YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 834
Query: 214 NLTYIVWMQSYSHLNDIDGVERVFYEM 240
TY + Y ++ ++ V +F EM
Sbjct: 835 AKTYTSLLHGYHNIGNMSEVSALFEEM 861
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 113/278 (40%), Gaps = 16/278 (5%)
Query: 145 YTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQ 204
YTY L+N +C E + A + +M ++ + +N L ++R G E+ + ++
Sbjct: 277 YTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDE 336
Query: 205 MKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAE 264
M I + + + + ++ + EM + + TYS L + + +
Sbjct: 337 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEP-DSQTYSLLIEGHCRGQ 395
Query: 265 LFEKAELALKKLEEMKPRDRK----AYHFLISLYCNTSNLDAVNRVW-GILKSTFPPTNT 319
+ A + L+EMK R Y +I+ C NL N + ++ + P
Sbjct: 396 NMAR---AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 452
Query: 320 SYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA-ALIFNN 378
Y L+ A AK ++ + E + D+ + +I + + EEA +
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512
Query: 379 AKKRANASARFFKSRESFMIYYLRSRQLDLA---LNEM 413
++R +A + +F+ Y ++ ++++A NEM
Sbjct: 513 LERRLRPNAHTYG---AFIDGYSKAGEMEIADRYFNEM 547
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 162/414 (39%), Gaps = 84/414 (20%)
Query: 43 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM 102
E K ++RL GS L + ++ + + KD++ + ++ ++ E++EW+
Sbjct: 69 EQKNWRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNLVSEILEWL 128
Query: 103 ESRK-MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCKELM 159
++ +FS DF + + K AEK N +++ YA N ++ AL+ Y +
Sbjct: 129 RTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRR 188
Query: 160 TERALALFEKM--------------------DELKFLGNTVAFNNLST------------ 187
A A+F +M + KF F++L
Sbjct: 189 YNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKM 248
Query: 188 ------MYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQ---SYSHLNDI-DGVER-- 235
M+ + G EK R + +M R + +TY M +Y ++ I D ++R
Sbjct: 249 FHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNYKEVSKIYDQMQRAG 308
Query: 236 --------------------------VFYEMCNECEDKCRWTTYSNLASIYVKAELFEKA 269
VF EM + + Y+ L + + + E+A
Sbjct: 309 LQPDVVSYALLISAYGKARREEEALAVFEEML-DAGIRPTHKAYNILLDAFAISGMVEQA 367
Query: 270 ELALKKLEEMKPRDR-----KAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPTNTSYLV 323
++ K ++ RDR +Y ++S Y N S+++ + LK F P +Y
Sbjct: 368 KIVFKSMK----RDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGT 423
Query: 324 LLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFN 377
L++ AK+N ++ + + +EE + + + I+ AY + + A + FN
Sbjct: 424 LIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFN 477
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 124/308 (40%), Gaps = 36/308 (11%)
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
F L T Y +LG + ++N M ++ + + +++ M++Y + E +F M
Sbjct: 141 FVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQ 200
Query: 242 NECEDKCRWTTYSNLASIYVKAELFEKAE-----LALKKLEEMKPRDRKAYHFLISLYCN 296
+ + TY + +V+ F++AE L K+ +KP D+K +H +I ++
Sbjct: 201 SGGPEPSA-LTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKP-DQKMFHMIIYMFKK 258
Query: 297 TSNLDAVNRVWGILKS-TFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRL 355
N + +V+ + + P T +Y L+ FE S ++
Sbjct: 259 AGNYEKARKVFAEMAARGVPQTTVTYNSLM--------------SFETNYKEVS----KI 300
Query: 356 ADVIIRAYLQKDMYEEAALI--FNNAKKRANASARFFKS-----RESFMIY--YLRSRQL 406
D + RA LQ D+ A LI + A++ A A F + R + Y L + +
Sbjct: 301 YDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAI 360
Query: 407 DLALNEMEAALSEAKQFHWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSLNC-LDFSA 465
+ + + K+ P + T + D++GAE F + LK +
Sbjct: 361 SGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVT 420
Query: 466 YSLLIKTY 473
Y LIK Y
Sbjct: 421 YGTLIKGY 428
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 123/307 (40%), Gaps = 19/307 (6%)
Query: 77 DMLEYC--VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYF 134
D+ +C +R K G ++ ++ M + + + + K +A AE Y
Sbjct: 28 DVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYL 87
Query: 135 NGLSEY-AKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLG 193
+ ++ A N +Y +++ YCK E+ALA +M+EL A++++ + + G
Sbjct: 88 KRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTG 147
Query: 194 QPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTY 253
K + +M + D + + V + I +F M N K TY
Sbjct: 148 NVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSM-NSRGCKPDVVTY 206
Query: 254 SNLASIYVKAELFEKAELALKKLEEMKPRDRKA----YHFLISLYCNTSNLDAVNRVW-G 308
+ + + K ++K + A+ LE MK D Y LI C + L V+
Sbjct: 207 NTMIAGLCK---WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEK 263
Query: 309 ILKSTFPPTNTSY--LVLLQALAKLNAIDILKQCFEEWESRCSS-----YDMRLADVIIR 361
+ + P T +Y L+L+ L K K+ F+E R S Y+ L ++
Sbjct: 264 MAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLST 323
Query: 362 AYLQKDM 368
A LQ M
Sbjct: 324 AKLQDAM 330
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 53/295 (17%), Positives = 113/295 (38%), Gaps = 5/295 (1%)
Query: 83 VRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA- 141
V+S K G A++V M ++ +F V L + I A + F ++
Sbjct: 140 VQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGC 199
Query: 142 -KNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRP 200
+ TY ++ CK + A+ L E+M + V + L + + ++
Sbjct: 200 KPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYE 259
Query: 201 LVNQMKQRNISLDNLTY--IVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLAS 258
+ +M + Y ++ + + +F EM T + L
Sbjct: 260 VFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEG 319
Query: 259 IYVKAELFEKAELALKKLEEMKPRDRKAYHFLISLYCNTSNLDAVNRVWGILKS-TFPPT 317
+ A+L + EL L+++ + Y LIS C T ++ ++ ++ F P+
Sbjct: 320 LLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPS 379
Query: 318 NTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEA 372
+ VLL LA+ +D + ++E + +++++ L++ +EA
Sbjct: 380 LKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEA 434
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 136/338 (40%), Gaps = 13/338 (3%)
Query: 90 GRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTY 147
G AL + E M + S V + K I + + +S + +R+T+
Sbjct: 260 GNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTF 319
Query: 148 GALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQ 207
+L+N C+ + AL + + M + F + +N+L +LG+ E+ ++NQM
Sbjct: 320 NSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMIL 379
Query: 208 RNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFE 267
R+ S + +TY + + N ++ E+ K S+ L
Sbjct: 380 RDFSPNTVTYNTLISTLCKENQVEEA----TELARVLTSKGILPDVCTFNSLIQGLCLTN 435
Query: 268 KAELALKKLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPTN-TSYL 322
LA++ EEMK + D Y+ LI C+ L+ + ++S+ N +Y
Sbjct: 436 NHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYN 495
Query: 323 VLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKR 382
L+ K I+ ++ F+E E + S ++ + +I + EEAA + +
Sbjct: 496 TLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLME 555
Query: 383 ANASARFFKSRESFMIYYLRSRQLDLALNEMEAALSEA 420
+F + S + Y+ R+ + A + ++ S
Sbjct: 556 GLKPDKF--TYNSLLTYFCRAGDIKKAADIVQTMTSNG 591
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 151/374 (40%), Gaps = 24/374 (6%)
Query: 66 AYIMEGKTVRKDMLEY--CVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAK 123
A ++ K + D+ + ++ L +R A+E+ E M+++ H + + +D
Sbjct: 409 ARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCS 468
Query: 124 TNGIAAAEKYFNGL--SEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVA 181
+ A + S ++N TY L++ +CK E A +F++M+ N V
Sbjct: 469 RGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVT 528
Query: 182 FNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMC 241
+N L + + E+ L++QM + D TY + + DI + M
Sbjct: 529 YNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMT 588
Query: 242 -NECEDKCRWTTYSNLASIYVKAELFEKAELALK--KLEEMKPRDRKAYHFLISLYCNTS 298
N CE TY L KA E A L+ +L+ M + + +L+
Sbjct: 589 SNGCEPDS--VTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKR 646
Query: 299 NLDAVNRVWGILKSTFPPTNTSYLVLLQALAKLN-----AIDILKQCFEEWESRCSSYDM 353
+AV +++ PP +Y V+ + L A+D L + ++ S +
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFL 706
Query: 354 RLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRSRQLDLALNEM 413
LA+ + ++ + + + N K+AN F S S ++ +L+ R+ AL +
Sbjct: 707 MLAEGLCALSMEDTLIK----LVNRVMKQAN----FSDSEVSMIMGFLKIRKFQDALATL 758
Query: 414 EAALS--EAKQFHW 425
LS E K+ W
Sbjct: 759 GRILSSREPKKAFW 772
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 147/411 (35%), Gaps = 18/411 (4%)
Query: 50 LSALGATG--GSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESR-K 106
L LG G GS+ L G +R+ + S KF + A+ V++ ME
Sbjct: 112 LRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFG 171
Query: 107 MHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSEYA--KNRYTYGALLNCYCKELMTERAL 164
+ + L++ N + E + + + T+ L+ C+ A+
Sbjct: 172 LKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAI 231
Query: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
+ E+M + F L ++ G + QM N+T V + Y
Sbjct: 232 LMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGY 291
Query: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPRDR 284
I+ V EM NE R+T S + + + E+ L+E D
Sbjct: 292 CKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDI 351
Query: 285 KAYHFLISLYCNTSNL-DAVNRVWGILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEE 343
Y+ LI C + +AV + ++ F P +Y L+ L K N ++ +
Sbjct: 352 FTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARV 411
Query: 344 WESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIYYLRS 403
S+ D+ + +I+ + + A +F K + F + +I L S
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEF---TYNMLIDSLCS 468
Query: 404 RQLDLALNEMEAALSEAKQFHWRPMQ---VTVDTFFRFFEEEKDVDGAEEF 451
R +E ALS K+ VT +T F + K ++ AEE
Sbjct: 469 R------GRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEI 513
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 135/341 (39%), Gaps = 9/341 (2%)
Query: 41 GNEDKLYKRLSALGATGG--SVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEV 98
GN LSA TG T AL+ + G Y + + + G+ + E
Sbjct: 679 GNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEF 738
Query: 99 IEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKYFNGLSE--YAKNRYTYGALLNCYCK 156
+ + + + F V ++ + A + + E ++ + + ALL Y +
Sbjct: 739 FQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSR 798
Query: 157 ELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLT 216
E + A L + + + + +N++ ++Y +LG + M++ S D T
Sbjct: 799 ETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATT 858
Query: 217 YIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALKKL 276
+ + YS + + + EM + + +TY+ L S Y + + +E AEL K +
Sbjct: 859 FNTLIMLYSRNQMVQEAQALLREMI-KTGNAPNISTYTTLISAYGRLQAYEDAELVFKSI 917
Query: 277 EEM--KPRDRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALAKLNA 333
E KP D AY+ +I++Y + + +K F P+ T+ +L+ + K A
Sbjct: 918 AETGCKP-DATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGA 976
Query: 334 IDILKQCFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAAL 374
++ E S D II ++L Y A +
Sbjct: 977 TGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVI 1017
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 166/392 (42%), Gaps = 26/392 (6%)
Query: 98 VIEWMESRKMHFSYTDFAVYLDLTAKTNGIAAAEKY--FNGLSEYAKNRYTYGALLNCYC 155
V E ++ K + TD + A T+ A E Y N YA N +L+
Sbjct: 43 VRETVDGWKEQLAPTDLCYVVKRVANTSWQRALELYECLNVARWYAPNPRMLAVMLSVLG 102
Query: 156 KELMTERALALFEKMDELKFLGNTV-AFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDN 214
+ A LF++ + +GN V +N+L ++Y R G V+ L+ +M+ R D
Sbjct: 103 RANQPGLAQELFDRAE--SSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDL 160
Query: 215 LTYIVWMQSYSHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKAELFEKAELALK 274
+T+ + +++ + +G+ + + TY+ L S L + A+
Sbjct: 161 VTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLIS---ACSLNNRLSDAIL 217
Query: 275 KLEEMKPR----DRKAYHFLISLYCNTSNLDAVNRVWGILK-STFPPTNTSYLVLLQALA 329
EEM+ + D Y+ +IS+Y ++A + ++ I++ F P +Y +L A A
Sbjct: 218 IFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFA 277
Query: 330 KLNAIDILKQCFEEW-ESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKK--RANAS 386
+ I+ +++ ++RCSS ++ + +I Y + M+ +A ++ K+ R S
Sbjct: 278 RDGRIEEVERIRGMMRDARCSSDEITY-NTMIHMYGKAGMHRKAEELYVQMKEEGRCPDS 336
Query: 387 ARFFKSRESFMIYYLRSRQLDLALNEMEAALSEAKQFHWRP-MQVTVDTFFRFFEEEKDV 445
F + +I L +NE A + + RP +Q + + +
Sbjct: 337 VTF-----TVLIDTLGKAGF---VNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFT 388
Query: 446 DGAEEFCKVLKSLNCLDFSAYSLLIKTYIAAG 477
D + +L++ D AYS+++ + AG
Sbjct: 389 DAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAG 420
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 133/317 (41%), Gaps = 16/317 (5%)
Query: 69 MEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMESRKMHFSYTDFAVYLDLTAKTNGIA 128
M+ + ++ ++ YC + F H L +I+ + + F D A+++ + A +
Sbjct: 609 MDAEVLQTAVMCYCRKG---FAFVAHEL-LIDCLHA----FDVKDSAMHVAIIASYGKLK 660
Query: 129 A---AEKYFNGLSE--YAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFN 183
AE F L + +A N Y ALL+ Y + ERA + M N N
Sbjct: 661 LWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCAN 720
Query: 184 NLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERVFYEMCNE 243
+ + R G+ +++ ++ + IS ++ T++V ++S +++ R Y E
Sbjct: 721 YVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEA-RSMYRQMKE 779
Query: 244 CEDKCRWTTYSNLASIYVKAELFEKAELALKKLEEMKPR-DRKAYHFLISLYCNTSNLDA 302
+ L ++Y + + AE +K +++ D Y+ +ISLY +
Sbjct: 780 AGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRN 839
Query: 303 VNRVW-GILKSTFPPTNTSYLVLLQALAKLNAIDILKQCFEEWESRCSSYDMRLADVIIR 361
V+ G+ + P T++ L+ ++ + + E ++ ++ +I
Sbjct: 840 AALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLIS 899
Query: 362 AYLQKDMYEEAALIFNN 378
AY + YE+A L+F +
Sbjct: 900 AYGRLQAYEDAELVFKS 916
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,058,494,238
Number of Sequences: 23463169
Number of extensions: 280658446
Number of successful extensions: 789184
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2354
Number of HSP's successfully gapped in prelim test: 2611
Number of HSP's that attempted gapping in prelim test: 759755
Number of HSP's gapped (non-prelim): 19968
length of query: 485
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 338
effective length of database: 8,910,109,524
effective search space: 3011617019112
effective search space used: 3011617019112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)