Query 048396
Match_columns 192
No_of_seqs 210 out of 787
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 09:09:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048396.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048396hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4450 Uncharacterized conser 100.0 2E-43 4.2E-48 278.3 7.8 164 14-188 4-168 (168)
2 COG2105 Uncharacterized conser 99.9 8.7E-23 1.9E-27 156.9 9.5 98 19-141 4-102 (120)
3 PF06094 AIG2: AIG2-like famil 99.9 5.7E-22 1.2E-26 146.2 11.7 100 19-139 1-102 (102)
4 cd06661 GGCT_like GGCT-like do 99.8 1.2E-18 2.5E-23 126.9 10.7 98 19-138 1-99 (99)
5 PHA03014 hypothetical protein; 99.6 5.5E-14 1.2E-18 113.7 11.7 105 17-140 3-116 (163)
6 KOG4059 Uncharacterized conser 99.0 4.7E-10 1E-14 90.0 4.4 102 17-139 24-131 (193)
7 PF13772 AIG2_2: AIG2-like fam 98.8 6.1E-09 1.3E-13 75.0 5.5 53 77-141 1-53 (83)
8 TIGR02713 allophanate_hyd allo 98.3 2.2E-06 4.8E-11 81.3 8.3 93 14-116 434-530 (561)
9 PRK08186 allophanate hydrolase 98.3 2.3E-06 4.9E-11 81.8 8.3 93 14-116 469-564 (600)
10 COG3703 ChaC Uncharacterized p 97.3 0.0017 3.7E-08 53.8 9.1 104 17-140 12-123 (190)
11 PF04752 ChaC: ChaC-like prote 97.0 0.0047 1E-07 50.8 8.9 103 18-141 2-118 (178)
12 KOG3182 Predicted cation trans 91.4 2 4.4E-05 36.1 9.1 67 64-141 53-125 (212)
13 PF11654 DUF2665: Protein of u 24.1 62 0.0013 21.1 1.8 24 165-188 22-45 (47)
No 1
>KOG4450 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=2e-43 Score=278.28 Aligned_cols=164 Identities=49% Similarity=0.811 Sum_probs=147.2
Q ss_pred CCccEEEEECCCCCCCCChHHHHhhhccCCeeEEeeeeecCCceEEEC-CCCCeEEEecCCCCccEEEEEEEEChhchHH
Q 048396 14 KCRALIFTYGTLKRGFSNHNLIQDLMLTGDAVFRGAYTTSESFPLVCG-PYRVPFLLNIPGSGHPVTGELYAVSAYGLSR 92 (192)
Q Consensus 14 ~~~~~lFVYGTLk~G~~nh~~l~~~~~~~~a~~vg~a~t~~~y~L~~g-~~~~P~l~~~pg~g~~V~GEly~v~~~~L~~ 92 (192)
+++.+||||||||+|+|||.+|++.+ ++.|+|+|.++|..+|||++| .|++|+|+..||.|..|.||||+||+.+|.+
T Consensus 4 s~~~lvFVYGTLKrg~pNh~~L~d~~-~g~A~F~gr~~T~~kyPLVigt~ynIPfLLnkpGsG~~V~GElY~Vd~rmL~~ 82 (168)
T KOG4450|consen 4 SAKNLVFVYGTLKRGQPNHFLLEDLI-NGDAVFIGRGTTLLKYPLVIGTRYNIPFLLNKPGSGYHVEGELYEVDERMLSR 82 (168)
T ss_pred ccceEEEEEeeecCCCCCchhhhhcc-CCceEEEEeceeccccceEeecccCCceEEcCCCCcceeeeEEEEeCHHHHhh
Confidence 45789999999999999999999985 899999999999999999987 8999999999999999999999999999999
Q ss_pred hhccccCCCCCceEeeeEEEEcCCcccccCCCCCccCccEEEEEecCCcchhHHHhhhCCcceeecCcccccccccccCC
Q 048396 93 MDELEGTSRGHYQRLGPIRVTKAAAAEEADDDSDDEAEAEAEAYFADRSYEMELWKKSGKLGFRWYGEKEAKGYVKRKDR 172 (192)
Q Consensus 93 LD~lEg~~~~~Y~R~~~v~V~~~~~~~~~~g~~~~~~~v~AwvY~~~~~~~~~l~~~~~~~~~~~Y~~~~~~~Y~~r~~r 172 (192)
||+||++| ++|+|. ++.|..++. +.+|+. ..++.||+|.. .+|.+.||. ++.+.+|+++.+++|++|++|
T Consensus 83 LD~lE~~~-~~Y~R~-~i~v~~~ed--e~eg~g--~~~v~c~~Y~~-~~fpe~l~~---~~~~~sY~~~~~~~Yv~r~~R 152 (168)
T KOG4450|consen 83 LDELEGCP-NHYERE-PIRVIEEED--EEEGEG--GVTVQCAVYAH-FGFPEELWE---KRGLCSYGENDGHPYVRRKDR 152 (168)
T ss_pred hHhhcccH-HHhhhh-hhHHHHhhh--hcccCC--CceeeehhHHH-hcCCHHHHh---ccccccccCCCCccccccccc
Confidence 99999997 899999 999987762 112221 34678999874 799999965 899999999999999999999
Q ss_pred CCCccHHHHHHHHhcc
Q 048396 173 PQNLSFLEHIRIFLSS 188 (192)
Q Consensus 173 ~~~~~~~~~i~~~~~~ 188 (192)
|+..|++|+|..|+|+
T Consensus 153 ~~~~~~~Ddi~~~vss 168 (168)
T KOG4450|consen 153 PMFSSALDDIEYFVSS 168 (168)
T ss_pred ccccchhhhhhhhccC
Confidence 9999999999999885
No 2
>COG2105 Uncharacterized conserved protein [Function unknown]
Probab=99.88 E-value=8.7e-23 Score=156.87 Aligned_cols=98 Identities=36% Similarity=0.538 Sum_probs=82.8
Q ss_pred EEEECCCCCCCCChHHHHhhhccCCeeEEeeeeecCCceEE-ECCCCCeEEEecCCCCccEEEEEEEEChhchHHhhccc
Q 048396 19 IFTYGTLKRGFSNHNLIQDLMLTGDAVFRGAYTTSESFPLV-CGPYRVPFLLNIPGSGHPVTGELYAVSAYGLSRMDELE 97 (192)
Q Consensus 19 lFVYGTLk~G~~nh~~l~~~~~~~~a~~vg~a~t~~~y~L~-~g~~~~P~l~~~pg~g~~V~GEly~v~~~~L~~LD~lE 97 (192)
||||||||+|++||+.+. .+++|++.+.|.+ |.|| +|. +||+++. +++ .|+||||++|...|+.||++|
T Consensus 4 vfVYGTLr~Ge~N~~~~~-----~~~~~~~~~~~~g-y~ly~lg~-~YP~~~~--g~~-~V~Gevy~~d~~~l~~LDelE 73 (120)
T COG2105 4 VFVYGTLRPGEGNHHRYL-----KGARFLGEASTKG-YQLYDLGP-GYPGLVP--GEG-KVHGEVYRIDEETLEALDELE 73 (120)
T ss_pred EEEEeccCCCCcchHHHH-----hcCcccCcceeee-eeeeccCC-CCcEEcC--CCC-EEEEEEEEECHHHHhhhhhhh
Confidence 999999999999999432 3689999999876 9999 676 4899964 666 899999999999999999999
Q ss_pred cCCCCCceEeeeEEEEcCCcccccCCCCCccCccEEEEEecCCc
Q 048396 98 GTSRGHYQRLGPIRVTKAAAAEEADDDSDDEAEAEAEAYFADRS 141 (192)
Q Consensus 98 g~~~~~Y~R~~~v~V~~~~~~~~~~g~~~~~~~v~AwvY~~~~~ 141 (192)
+++ .|.|+ .+.|++.. |.. +||+|++++.
T Consensus 74 ~~~--~y~r~-~v~v~~~~------G~~------~aw~Y~y~~~ 102 (120)
T COG2105 74 DYG--GYYRR-EVEVTTPL------GSK------EAWLYVYAER 102 (120)
T ss_pred ccC--ceEEE-EEEEEcCC------CCE------EEEEEEEcCC
Confidence 996 78888 88888876 432 5999999754
No 3
>PF06094 AIG2: AIG2-like family; InterPro: IPR009288 AIG2 is an Arabidopsis protein that exhibit RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 []. Its structure consists of a five-stranded beta-barrel surrounded by two alpha-helices and a small beta-sheet. A long flexible alpha-helix protrudes from the structure at the C-terminal end. Conserved residues in a hydrophilic cavity, which are able to bind small ligands, may act as an active site in AIG2-like proteins [].; PDB: 1XHS_A 2KL2_A 1VKB_A 3JUD_A 3JUB_A 3JUC_A 2JQV_A 2QIK_A 2G0Q_A 1V30_A.
Probab=99.88 E-value=5.7e-22 Score=146.16 Aligned_cols=100 Identities=34% Similarity=0.480 Sum_probs=79.8
Q ss_pred EEEECCCCCCCCChHHHHhhhccCCeeEEeeeeecCCceEE-ECCCCCeEEEecCCCCc-cEEEEEEEEChhchHHhhcc
Q 048396 19 IFTYGTLKRGFSNHNLIQDLMLTGDAVFRGAYTTSESFPLV-CGPYRVPFLLNIPGSGH-PVTGELYAVSAYGLSRMDEL 96 (192)
Q Consensus 19 lFVYGTLk~G~~nh~~l~~~~~~~~a~~vg~a~t~~~y~L~-~g~~~~P~l~~~pg~g~-~V~GEly~v~~~~L~~LD~l 96 (192)
||||||||.|++||.++.. ..+++++.+.+.+. ++ ....+||+|+..+ +. .|.|+||+|+++.|+.||+|
T Consensus 1 lFvYGTL~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~yP~l~~~~--~~~~V~G~l~~v~~~~l~~LD~~ 72 (102)
T PF06094_consen 1 LFVYGTLMDGEVNHSVLGR----PGAKFIGEPATLGG--RYLYGGGGYPALVPGE--GSGRVEGELYEVDDEELARLDEY 72 (102)
T ss_dssp EEESSTTSTTSTTGHHGTS----GSSEEEEEEEEEEE--EEEETTSSCEEEESCT--TSSEEEEEEEEE-HHHHHHHHHH
T ss_pred CEEECCCCCCCcChhhhhc----cceEEEEeeEEEEe--EEEeCCCCCCEEEEcC--CCCEEEEEEEEECHHHHHhhHhh
Confidence 7999999999999998742 26789998877662 33 4445799998744 44 89999999999999999999
Q ss_pred ccCCCCCceEeeeEEEEcCCcccccCCCCCccCccEEEEEecC
Q 048396 97 EGTSRGHYQRLGPIRVTKAAAAEEADDDSDDEAEAEAEAYFAD 139 (192)
Q Consensus 97 Eg~~~~~Y~R~~~v~V~~~~~~~~~~g~~~~~~~v~AwvY~~~ 139 (192)
|+.+ +.|+|+ .++|.+.+ |+. ++||+|+++
T Consensus 73 E~~~-~~Y~R~-~v~v~~~~------g~~-----~~a~vYv~~ 102 (102)
T PF06094_consen 73 EGEG-SLYRRV-RVPVELGD------GEE-----VEAWVYVWN 102 (102)
T ss_dssp TTTT-TSEEEE-EEEEECCT------SSE-----EEEEEEEE-
T ss_pred cCCC-CceEEE-EEEEEeCC------CCE-----eEEEEEEEC
Confidence 9855 799999 99999876 433 479999874
No 4
>cd06661 GGCT_like GGCT-like domains, also called AIG2-like family. Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is encoded by the gene C7orf24, and the enzyme participates in the gamma-glutamyl cycle. Hereditary defects in the gamma-glutamyl cycle have been described for some of the genes involved, but not for C7orf24. The synthesis and metabolism of glutathione (L-gamma-glutamyl-L-cysteinylglycine) ties the gamma-glutamyl cycle to numerous cellular processes; glutathione acts as a ubiquitous reducing agent in reductive mechanisms involved in protein and DNA synthesis, transport processes, enzyme activity, and metabolism. AIG2 (avrRpt2-induced gene) is an Arabidopsis protein that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. avrRpt2 is an avir
Probab=99.79 E-value=1.2e-18 Score=126.86 Aligned_cols=98 Identities=38% Similarity=0.557 Sum_probs=81.2
Q ss_pred EEEECCCCCCCCChHHHHhhhccCCeeEEeeeeecCCceEEE-CCCCCeEEEecCCCCccEEEEEEEEChhchHHhhccc
Q 048396 19 IFTYGTLKRGFSNHNLIQDLMLTGDAVFRGAYTTSESFPLVC-GPYRVPFLLNIPGSGHPVTGELYAVSAYGLSRMDELE 97 (192)
Q Consensus 19 lFVYGTLk~G~~nh~~l~~~~~~~~a~~vg~a~t~~~y~L~~-g~~~~P~l~~~pg~g~~V~GEly~v~~~~L~~LD~lE 97 (192)
+|||||||.+..||... ..+...++|++. +|+|.. +..++|+++.. .+..|+|+||+++++.|+.||++|
T Consensus 1 ~F~YGsl~~~~~~~~~~------~~~~~~~~a~l~-g~~l~~~~~~~~p~~~~~--~~~~v~G~v~~i~~~~l~~LD~~E 71 (99)
T cd06661 1 LFVYGTLMDGEVLHARL------GRALFLGPATLK-GYRLVFGGGSGYPGLVPG--PGARVWGELYEVDPEDLARLDAFE 71 (99)
T ss_pred CEEeccCCChhHhHhhC------CCCceEEEEEec-CcEEEecCCCccCEEEeC--CCCEEEEEEEEECHHHHHhhhhhc
Confidence 69999999999998763 467888899875 899984 32268999864 466899999999999999999999
Q ss_pred cCCCCCceEeeeEEEEcCCcccccCCCCCccCccEEEEEec
Q 048396 98 GTSRGHYQRLGPIRVTKAAAAEEADDDSDDEAEAEAEAYFA 138 (192)
Q Consensus 98 g~~~~~Y~R~~~v~V~~~~~~~~~~g~~~~~~~v~AwvY~~ 138 (192)
+.+ +.|.|+ .|+|.+.+ |. .++||+|++
T Consensus 72 ~~~-~~Y~r~-~v~v~~~~------~~-----~~~a~~Y~~ 99 (99)
T cd06661 72 GVP-GGYRRE-EVEVELED------GE-----GVEAWVYVA 99 (99)
T ss_pred CCC-CCeEEE-EEEEEeCC------CC-----EEEEEEEeC
Confidence 987 799999 99999875 33 357999974
No 5
>PHA03014 hypothetical protein; Provisional
Probab=99.55 E-value=5.5e-14 Score=113.72 Aligned_cols=105 Identities=22% Similarity=0.241 Sum_probs=79.3
Q ss_pred cEEEEECCCCCCCCChHHHHhhhccC---CeeEEeeeeecCC--ceEE-ECCC-CCeEEEecCCCCccEEEEEEEEChhc
Q 048396 17 ALIFTYGTLKRGFSNHNLIQDLMLTG---DAVFRGAYTTSES--FPLV-CGPY-RVPFLLNIPGSGHPVTGELYAVSAYG 89 (192)
Q Consensus 17 ~~lFVYGTLk~G~~nh~~l~~~~~~~---~a~~vg~a~t~~~--y~L~-~g~~-~~P~l~~~pg~g~~V~GEly~v~~~~ 89 (192)
...|+||+.| |...|+. .|. +|+++|.|.. .+ |+|. .+.+ +-++-| .|..|+.|+|.||+|+.+.
T Consensus 3 ~~YfAYGSNl----~~~qm~~--Rcp~~~~a~~vg~a~L-~~~~~~L~f~~~~~Ga~ATI-vp~~g~~V~Gvlw~i~~~d 74 (163)
T PHA03014 3 KYYFGYGANQ----NINYLIH--MHKLKIDFLNIKIGII-LGHSFKLCYSKEIDSVIASI-KKDDNGIVFGILYEFNESI 74 (163)
T ss_pred eEEEEEccCc----CHHHHHH--hCCCCCCCceEEEEEe-eccceEEeccCCcCCceEEE-EECCCCEEEEEEEEeCHHH
Confidence 4689999988 4445654 456 9999999985 64 4665 3433 333433 4567889999999999999
Q ss_pred hHHhhccccCCCCCceEeeeEEEEcCCcccccCCCCCccCccEEEEE--ecCC
Q 048396 90 LSRMDELEGTSRGHYQRLGPIRVTKAAAAEEADDDSDDEAEAEAEAY--FADR 140 (192)
Q Consensus 90 L~~LD~lEg~~~~~Y~R~~~v~V~~~~~~~~~~g~~~~~~~v~AwvY--~~~~ 140 (192)
|+.||++||+|.+.|.|. .|.|.+.+ +|+ .++|++| ++++
T Consensus 75 l~~LD~~EGvp~~~Y~~~-~v~V~~~~-----~~~-----~~~a~~Y~~~~~~ 116 (163)
T PHA03014 75 MKKFDKQEFIDKNIYKLA-KMNVLDLE-----DEK-----IIEAQAYKAILDD 116 (163)
T ss_pred HHHHhhhcCCCcCceEEE-EEEEEeCC-----CCc-----EEEEEEEehhcCC
Confidence 999999999997789999 99998875 122 3579999 5543
No 6
>KOG4059 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.98 E-value=4.7e-10 Score=89.98 Aligned_cols=102 Identities=25% Similarity=0.319 Sum_probs=82.1
Q ss_pred cEEEEECCCCCCCCChHHHHhhhccCCeeEEeeeeecCCceEEEC----CC--CCeEEEecCCCCccEEEEEEEEChhch
Q 048396 17 ALIFTYGTLKRGFSNHNLIQDLMLTGDAVFRGAYTTSESFPLVCG----PY--RVPFLLNIPGSGHPVTGELYAVSAYGL 90 (192)
Q Consensus 17 ~~lFVYGTLk~G~~nh~~l~~~~~~~~a~~vg~a~t~~~y~L~~g----~~--~~P~l~~~pg~g~~V~GEly~v~~~~L 90 (192)
.++|.||+.+-+..-|- ++..|.+++.|. ..+|+|-.+ .| +...+ .|.+|..|+|.||.++.+.|
T Consensus 24 FlYFafGSNlL~~RIh~------rnpsA~~~c~a~-L~dfrLdFan~S~~W~G~vATI--~~t~GdeVWG~vWKm~~snl 94 (193)
T KOG4059|consen 24 FLYFAFGSNLLIKRIHI------RNPSAVRICPAL-LPDFRLDFANESAGWSGSVATI--VPTQGDEVWGTVWKMDLSNL 94 (193)
T ss_pred hhhhhcccchhhhheee------cCCCceeecccc-CcceeeeccccccccccceeEE--ecCCCCeEEEEEEEcccccC
Confidence 57899999988876553 357899999998 589999643 23 23333 45678999999999999999
Q ss_pred HHhhccccCCCCCceEeeeEEEEcCCcccccCCCCCccCccEEEEEecC
Q 048396 91 SRMDELEGTSRGHYQRLGPIRVTKAAAAEEADDDSDDEAEAEAEAYFAD 139 (192)
Q Consensus 91 ~~LD~lEg~~~~~Y~R~~~v~V~~~~~~~~~~g~~~~~~~v~AwvY~~~ 139 (192)
+.||+.||+..+.|.|. .|.|.+.. |+. ++|.+|.+.
T Consensus 95 ~slDeQEgv~~G~Y~~~-~V~V~t~e------g~~-----itcR~Yl~s 131 (193)
T KOG4059|consen 95 PSLDEQEGVSQGIYEPR-TVYVKTHE------GES-----ITCRAYLLS 131 (193)
T ss_pred ccchhhhcccccceEEE-EEEEecCC------Cce-----eehhHhhhh
Confidence 99999999988899999 99999886 544 469999874
No 7
>PF13772 AIG2_2: AIG2-like family; PDB: 2QIK_A 2RBH_B 2I5T_B 2Q53_A 2PN7_B 3CRY_A.
Probab=98.84 E-value=6.1e-09 Score=74.97 Aligned_cols=53 Identities=34% Similarity=0.527 Sum_probs=46.3
Q ss_pred cEEEEEEEEChhchHHhhccccCCCCCceEeeeEEEEcCCcccccCCCCCccCccEEEEEecCCc
Q 048396 77 PVTGELYAVSAYGLSRMDELEGTSRGHYQRLGPIRVTKAAAAEEADDDSDDEAEAEAEAYFADRS 141 (192)
Q Consensus 77 ~V~GEly~v~~~~L~~LD~lEg~~~~~Y~R~~~v~V~~~~~~~~~~g~~~~~~~v~AwvY~~~~~ 141 (192)
+|+|-||+|+++.++.||+.||.+.+.|+|. .|+|.+.+ |+ .+.||+|++++.
T Consensus 1 ~V~Gvly~l~~~d~~~LD~~Eg~~~g~Y~~~-~v~V~~~~------g~-----~~~a~tY~~~~~ 53 (83)
T PF13772_consen 1 RVWGVLYELSEEDLESLDRYEGVPIGAYRRI-EVTVSTAD------GK-----PVEAFTYVANPK 53 (83)
T ss_dssp EEEEEEEEEEGGGHHHHHHHTTTTTTSEEEE-EEEEEETT------CE-----EEEEEEEEESSE
T ss_pred CEEEEEEEECHHHHHHHHHhcCCCCCCEEEE-EEEEEcCC------CC-----EEEEEEEEcCCC
Confidence 4999999999999999999999997789999 99998855 43 357999998764
No 8
>TIGR02713 allophanate_hyd allophanate hydrolase. Allophanate hydrolase catalyzes the second reaction in an ATP-dependent two-step degradation of urea to ammonia and C02, following the action of the biotin-containing urea carboxylase. The yeast enzyme, a fusion of allophanate hydrolase to urea carboxylase, is designated urea amidolyase.
Probab=98.30 E-value=2.2e-06 Score=81.30 Aligned_cols=93 Identities=15% Similarity=0.104 Sum_probs=71.7
Q ss_pred CCccEEEEECCCCCCCCChHHHHhhhccCCeeEEeeeeecCCceEE-EC-CC-CCeEEEecCC-CCccEEEEEEEEChhc
Q 048396 14 KCRALIFTYGTLKRGFSNHNLIQDLMLTGDAVFRGAYTTSESFPLV-CG-PY-RVPFLLNIPG-SGHPVTGELYAVSAYG 89 (192)
Q Consensus 14 ~~~~~lFVYGTLk~G~~nh~~l~~~~~~~~a~~vg~a~t~~~y~L~-~g-~~-~~P~l~~~pg-~g~~V~GEly~v~~~~ 89 (192)
.....|+|.|..|+|++.|+.|.+ .+|+|++..+|...|+|| +. .. .-|+|++.+. .|..|.||||+++.+.
T Consensus 434 ~~~~~~~v~gah~~g~pl~~~l~~----~~~~~~~~~~ta~~yrl~~l~~~~p~~pgl~~~~~~~g~~i~~e~w~~~~~~ 509 (561)
T TIGR02713 434 PRVVRLAVVGAHLSGMPLNWQLTE----RGARLLRTTRTAPDYRLYALAGTPPPKPGLVRVAPGGGAAIEVEVWELPAEA 509 (561)
T ss_pred CCceEEEEecccccCCCccHHHHh----CCCEEecccccCccceEEECCCCCCCCCceEeecCCCCCeEEEEEeeCCHHH
Confidence 345779999999999998887754 689999999999999999 53 22 2599998763 5889999999999999
Q ss_pred hHHhhccccCCCCCceEeeeEEEEcCC
Q 048396 90 LSRMDELEGTSRGHYQRLGPIRVTKAA 116 (192)
Q Consensus 90 L~~LD~lEg~~~~~Y~R~~~v~V~~~~ 116 (192)
+..+=. +.|..+. .=.|++.|
T Consensus 510 ~~~f~~--~~p~pl~----~g~~~l~d 530 (561)
T TIGR02713 510 FGRFVA--AIPAPLG----IGTVTLAD 530 (561)
T ss_pred HHHHHh--CCCCCCc----cceEEecC
Confidence 987744 4443353 23356666
No 9
>PRK08186 allophanate hydrolase; Provisional
Probab=98.29 E-value=2.3e-06 Score=81.81 Aligned_cols=93 Identities=16% Similarity=0.144 Sum_probs=72.6
Q ss_pred CCccEEEEECCCCCCCCChHHHHhhhccCCeeEEeeeeecCCceEE-EC--CCCCeEEEecCCCCccEEEEEEEEChhch
Q 048396 14 KCRALIFTYGTLKRGFSNHNLIQDLMLTGDAVFRGAYTTSESFPLV-CG--PYRVPFLLNIPGSGHPVTGELYAVSAYGL 90 (192)
Q Consensus 14 ~~~~~lFVYGTLk~G~~nh~~l~~~~~~~~a~~vg~a~t~~~y~L~-~g--~~~~P~l~~~pg~g~~V~GEly~v~~~~L 90 (192)
.....|.|.|..|+|+|.|+.|.+ .+|+|++..+|...|+|| +. .-.-|+|++.+..|..|.||||+++.+.+
T Consensus 469 ~~~~~~av~gah~~g~pl~~~l~~----~~~~~~~~~~ta~~yrl~~l~~~~~~~pgl~~~~~~g~~i~~e~w~~~~~~~ 544 (600)
T PRK08186 469 PDRVRLAVVGAHLSGMPLNHQLTS----RGARLLEATTTAPDYRLYALAGTPPPKPGLVRVAEGGAAIAVEVWELPPAAF 544 (600)
T ss_pred CCceEEEEecccccCCCccHHHHh----CCCEEecccccCccceEEeCCCCCCCCCceEEeCCCCCeEEEEEeeCCHHHH
Confidence 345679999999999998887754 689999999999999999 53 22369999887668999999999999999
Q ss_pred HHhhccccCCCCCceEeeeEEEEcCC
Q 048396 91 SRMDELEGTSRGHYQRLGPIRVTKAA 116 (192)
Q Consensus 91 ~~LD~lEg~~~~~Y~R~~~v~V~~~~ 116 (192)
..+=.- .|..+. .=.|++.|
T Consensus 545 ~~f~~~--~p~pl~----~g~~~l~d 564 (600)
T PRK08186 545 GSFVAA--IPAPLG----IGTVELAD 564 (600)
T ss_pred HHHHhC--CCCCCc----cceEEecC
Confidence 887444 443353 23456666
No 10
>COG3703 ChaC Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism]
Probab=97.34 E-value=0.0017 Score=53.77 Aligned_cols=104 Identities=22% Similarity=0.188 Sum_probs=69.9
Q ss_pred cEEEEECCCCCCCCChHHHHhhhccCCeeEEeeeeecCCceEE----ECCCCCeEEEecCCCCccEEEEEEEEC----hh
Q 048396 17 ALIFTYGTLKRGFSNHNLIQDLMLTGDAVFRGAYTTSESFPLV----CGPYRVPFLLNIPGSGHPVTGELYAVS----AY 88 (192)
Q Consensus 17 ~~lFVYGTLk~G~~nh~~l~~~~~~~~a~~vg~a~t~~~y~L~----~g~~~~P~l~~~pg~g~~V~GEly~v~----~~ 88 (192)
..||-|||||-.-+-+.. . ...|..-|-.+ .|.+. -|...-|+++..-..|....|.+|+|+ ++
T Consensus 12 ~WVFgYGSLmW~P~f~~~-e----~~~a~~~G~~R---sfc~~s~~~RGT~~~PGlvl~L~~GGsc~GvafRip~~~~~~ 83 (190)
T COG3703 12 LWVFGYGSLMWNPGFEFT-E----VRRATLHGYHR---SFCLRSTDHRGTAEQPGLVLGLDRGGSCEGVAYRIPEAHAEE 83 (190)
T ss_pred eEEEEecceeecCCcccc-c----eeEEEEeccee---EEEEEEeeecCCcCCCceEEEeeCCCcEEEEEEEcCchhhHH
Confidence 899999999966543321 1 12233333222 22232 255567998764345678999999999 77
Q ss_pred chHHhhccccCCCCCceEeeeEEEEcCCcccccCCCCCccCccEEEEEecCC
Q 048396 89 GLSRMDELEGTSRGHYQRLGPIRVTKAAAAEEADDDSDDEAEAEAEAYFADR 140 (192)
Q Consensus 89 ~L~~LD~lEg~~~~~Y~R~~~v~V~~~~~~~~~~g~~~~~~~v~AwvY~~~~ 140 (192)
.+..|++=|...+..|.-+ -++|.+++ |.. +.|-+|+.++
T Consensus 84 v~~yL~~RE~~~t~~y~p~-~l~v~~~~------g~~-----~~al~~v~~~ 123 (190)
T COG3703 84 VLEYLREREMNYTLVYVPR-WLPVELEG------GRR-----VNALVFVGDR 123 (190)
T ss_pred HHHHHHHhhccccceeeeE-EEEEecCC------CcE-----EEEEEEEecC
Confidence 8999999998334788888 88888875 443 4699998763
No 11
>PF04752 ChaC: ChaC-like protein; InterPro: IPR006840 The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli. Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins.
Probab=97.04 E-value=0.0047 Score=50.76 Aligned_cols=103 Identities=22% Similarity=0.210 Sum_probs=62.6
Q ss_pred EEEEECCCCCCCCChHHHHhhhccCCeeEEeeeeecCCceE-E-E------CCCCCeEEEe--cCCCCccEEEEEEEECh
Q 048396 18 LIFTYGTLKRGFSNHNLIQDLMLTGDAVFRGAYTTSESFPL-V-C------GPYRVPFLLN--IPGSGHPVTGELYAVSA 87 (192)
Q Consensus 18 ~lFVYGTLk~G~~nh~~l~~~~~~~~a~~vg~a~t~~~y~L-~-~------g~~~~P~l~~--~pg~g~~V~GEly~v~~ 87 (192)
.||.||||+-.. +.++-+ +. .|.+ .+|.. | + |....|+++. .++++..++|-+|.|++
T Consensus 2 WVFGYGSLiW~p-~f~~~e--------~~--~a~i-~Gy~R~F~~~s~~hRGTpe~PGrvltL~~~~~~~c~Gvayrv~~ 69 (178)
T PF04752_consen 2 WVFGYGSLIWNP-GFPYAE--------RR--PAYI-KGYHRRFCQGSTDHRGTPEQPGRVLTLDPGEEGSCWGVAYRVPE 69 (178)
T ss_pred EEEEeccceeCC-CCCccc--------eE--EEEe-cCcccceEeeccccCCCcCCCcceeeeeeCCCCEEEEEEEEecC
Confidence 699999999542 222221 11 2332 22222 2 2 3334677553 34545789999999986
Q ss_pred ----hchHHhhccccCCCCCceEeeeEEEEcCCcccccCCCCCccCccEEEEEecCCc
Q 048396 88 ----YGLSRMDELEGTSRGHYQRLGPIRVTKAAAAEEADDDSDDEAEAEAEAYFADRS 141 (192)
Q Consensus 88 ----~~L~~LD~lEg~~~~~Y~R~~~v~V~~~~~~~~~~g~~~~~~~v~AwvY~~~~~ 141 (192)
+.|+.||.=|-. +.|.+. .+++.+... ...+. ..+.|.+|+.++.
T Consensus 70 ~~~~~~l~~L~~RE~~--~Gy~~~-~v~~~~~~~--~~~~~----~~~~al~yv~~~~ 118 (178)
T PF04752_consen 70 EDAEEVLEYLDEREMI--GGYTRH-WVPFYPEVD--TDSGP----VIVEALVYVADPD 118 (178)
T ss_pred cCHHHHHHHHhhcccc--cccceE-EEEEEEecc--CCCCc----eEEEEEEEEecCC
Confidence 678899988873 469999 899876220 00111 1247999998763
No 12
>KOG3182 consensus Predicted cation transporter [Inorganic ion transport and metabolism]
Probab=91.41 E-value=2 Score=36.11 Aligned_cols=67 Identities=18% Similarity=0.090 Sum_probs=45.0
Q ss_pred CCeEEE--ecCCCCccEEEEEEEECh----hchHHhhccccCCCCCceEeeeEEEEcCCcccccCCCCCccCccEEEEEe
Q 048396 64 RVPFLL--NIPGSGHPVTGELYAVSA----YGLSRMDELEGTSRGHYQRLGPIRVTKAAAAEEADDDSDDEAEAEAEAYF 137 (192)
Q Consensus 64 ~~P~l~--~~pg~g~~V~GEly~v~~----~~L~~LD~lEg~~~~~Y~R~~~v~V~~~~~~~~~~g~~~~~~~v~AwvY~ 137 (192)
..|+-+ ..|.....-+|..|.|+. +.|+.||.=| . +.|.+. .|++...+. ... ...+.|-+|+
T Consensus 53 ~~PGRv~TLi~~~e~~~wGvay~V~g~~~~~~l~yl~~RE-~--nGY~~~-~v~f~~e~~------~~~-p~v~~vlvyv 121 (212)
T KOG3182|consen 53 EHPGRVATLIPYEEAITWGVAYRVRGKQASEVLEYLNVRE-L--NGYTTH-EVEFYPEDA------AEL-PEVLGVLVYV 121 (212)
T ss_pred CCCceeEEeecCCcceEeeEEEEecchhHHHHHHHHHHHh-h--cCccee-eeeeeccCC------CCC-CceEEEEEEE
Confidence 346533 234555566999999984 4566677666 3 689999 999998762 111 2346799998
Q ss_pred cCCc
Q 048396 138 ADRS 141 (192)
Q Consensus 138 ~~~~ 141 (192)
.++.
T Consensus 122 aTp~ 125 (212)
T KOG3182|consen 122 ATPD 125 (212)
T ss_pred ecCC
Confidence 7654
No 13
>PF11654 DUF2665: Protein of unknown function (DUF2665); InterPro: IPR024242 This entry represents the non classical export protein 1 family. Family members are Involved in a novel pathway of export of proteins that lack a cleavable signal sequence [].; GO: 0009306 protein secretion
Probab=24.11 E-value=62 Score=21.05 Aligned_cols=24 Identities=29% Similarity=0.360 Sum_probs=18.3
Q ss_pred ccccccCCCCCccHHHHHHHHhcc
Q 048396 165 GYVKRKDRPQNLSFLEHIRIFLSS 188 (192)
Q Consensus 165 ~Y~~r~~r~~~~~~~~~i~~~~~~ 188 (192)
.|..|..||++++..+-|.--.++
T Consensus 22 l~e~R~~rp~g~~L~eLl~~k~~~ 45 (47)
T PF11654_consen 22 LYENREGRPEGHSLNELLRRKWNK 45 (47)
T ss_pred HHHHhccCCCCCcHHHHHHHHhhc
Confidence 466789999999999877655443
Done!