BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048398
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P67064|UBIE_TROWT Demethylmenaquinone methyltransferase OS=Tropheryma whipplei
(strain Twist) GN=ubiE PE=3 SV=1
Length = 239
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 157 ASSVDKANDVMR----GNWLQAIEKHHQQYAGEIRDILDIGCSVGVSTKCLADKFPSAKV 212
A + D+ N V+ +W +A K AGE ++LD+G G ST+ +A A V
Sbjct: 27 AQAYDRTNLVLSFLQDAHWRRAACKMLGVTAGE--EVLDVGAGTGASTRTVART--GAAV 82
Query: 213 TGLDLSPYFLAVAQLKEKKGGPRKNPISWVHAIGEDSGLPSKSFDVVSLSYVVCLLSNSE 272
TG+D+SP L +A+ + K R I+W G D P KSFD + + + + +SN +
Sbjct: 83 TGIDISPRMLQIARNRCK----RFQNITWRLTNG-DLPFPDKSFDAILMVFCLRNVSNIQ 137
>sp|P67065|UBIE_TROW8 Demethylmenaquinone methyltransferase OS=Tropheryma whipplei
(strain TW08/27) GN=ubiE PE=3 SV=1
Length = 239
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 157 ASSVDKANDVMR----GNWLQAIEKHHQQYAGEIRDILDIGCSVGVSTKCLADKFPSAKV 212
A + D+ N V+ +W +A K AGE ++LD+G G ST+ +A A V
Sbjct: 27 AQAYDRTNLVLSFLQDAHWRRAACKMLGVTAGE--EVLDVGAGTGASTRTVART--GAAV 82
Query: 213 TGLDLSPYFLAVAQLKEKKGGPRKNPISWVHAIGEDSGLPSKSFDVVSLSYVVCLLSNSE 272
TG+D+SP L +A+ + K R I+W G D P KSFD + + + + +SN +
Sbjct: 83 TGIDISPRMLQIARNRCK----RFQNITWRLTNG-DLPFPDKSFDAILMVFCLRNVSNIQ 137
>sp|Q5ZT34|BIOC_LEGPH Malonyl-CoA O-methyltransferase BioC OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=bioC PE=3 SV=2
Length = 284
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 187 RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKKGGPRKNPISWVHAIG 246
R ILD+GC G +K LA +P A++ G+DLS F + Q ++K+G RK P+ V A
Sbjct: 44 RRILDLGCGPGFFSKELALLYPKAQIVGMDLS--FAMLEQARKKQGWRRKWPL--VSADM 99
Query: 247 EDSGLPSKSFDVVSLSYVV 265
+ + +FD+V + V+
Sbjct: 100 QKMPFATGAFDLVFANQVI 118
>sp|D5DIV9|BIOC_BACMD Malonyl-CoA O-methyltransferase BioC OS=Bacillus megaterium (strain
DSM 319) GN=bioC PE=3 SV=1
Length = 274
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 149 MTRRAIPYASSVDKANDVMRGNWLQAIEKHHQQYAGEIRDILDIGCSVGVSTKCLADKFP 208
+ +R +A + D DV + Q I + + + IL+IGC G T+ L KFP
Sbjct: 7 LKKRFNNHAKTYDAYADVQKSMAHQLINQLSTNFFNQEIAILEIGCGTGYLTQLLCKKFP 66
Query: 209 SAKVTGLDLSPYFLAVAQLK 228
A +T +DLS + +A+ K
Sbjct: 67 KAAITAVDLSSGMIELAKKK 86
>sp|P08442|Y1184_SYNP6 Uncharacterized protein syc1184_c OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=syc1184_c PE=4 SV=1
Length = 417
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKKGG 233
ILD GC GVST LA PSA++T +D+S LAVAQ + ++ G
Sbjct: 75 ILDAGCGTGVSTDYLAHLNPSAEITAIDISAGTLAVAQERCQRSG 119
>sp|A3DBD7|BIOC_CLOTH Malonyl-CoA O-methyltransferase BioC OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=bioC PE=3 SV=1
Length = 283
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 188 DILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
DILD+GC G TK L D++P A++T +D++P + A+
Sbjct: 45 DILDVGCGTGYLTKLLLDRWPDARITAIDIAPGMIEYAR 83
>sp|Q8KF69|UBIE_CHLTE Demethylmenaquinone methyltransferase OS=Chlorobium tepidum (strain
ATCC 49652 / DSM 12025 / TLS) GN=ubiE PE=3 SV=1
Length = 242
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 174 AIEKHHQQYAGEIR-DILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKKG 232
A +K +Q GE ILD+ G +A K P AKVTG DLSP LA+A+
Sbjct: 51 AAKKARKQLEGEREPKILDVATGTGDLAASMA-KIPGAKVTGYDLSPEMLAIAR------ 103
Query: 233 GPRKNP-ISWVHAIGEDSGLPSKSFDVVSLSYVV 265
+K P I ++ E +SF VVS + V
Sbjct: 104 --KKYPNIEFLEGFAEKMPFDDRSFHVVSAGFGV 135
>sp|B7GHW9|BIOC_ANOFW Malonyl-CoA O-methyltransferase BioC OS=Anoxybacillus flavithermus
(strain DSM 21510 / WK1) GN=bioC PE=3 SV=1
Length = 259
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKKGGPRKNPISWVHAIGED 248
IL+IGC G TK L D +P A++T +D++P + A K++ G PI+W+ A E+
Sbjct: 47 ILEIGCGTGYLTKLLHDAYPKAELTAVDIAPGMIEKA--KQRLGDA---PITWLCADIEE 101
Query: 249 SGL 251
+ L
Sbjct: 102 AEL 104
>sp|B0UPF4|TAM_METS4 Trans-aconitate 2-methyltransferase OS=Methylobacterium sp. (strain
4-46) GN=tam PE=3 SV=1
Length = 257
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
++D+GC G ST L +FP A VTGLD SP LA A+
Sbjct: 35 VIDLGCGPGNSTALLCARFPRAAVTGLDSSPDMLATAR 72
>sp|Q8FZM5|TAM_BRUSU Trans-aconitate 2-methyltransferase OS=Brucella suis biovar 1
(strain 1330) GN=tam PE=3 SV=1
Length = 255
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 187 RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
R ++DIGC G STK L +++P A+++G D SP + A+
Sbjct: 33 RKVVDIGCGPGNSTKLLVERWPDAQISGFDTSPDMIDTAK 72
>sp|B0CHP1|TAM_BRUSI Trans-aconitate 2-methyltransferase OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=tam PE=3 SV=1
Length = 255
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 187 RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
R ++DIGC G STK L +++P A+++G D SP + A+
Sbjct: 33 RKVVDIGCGPGNSTKLLVERWPDAQISGFDTSPDMIDTAK 72
>sp|A5VRJ7|TAM_BRUO2 Trans-aconitate 2-methyltransferase OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=tam PE=3 SV=1
Length = 255
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 187 RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
R ++DIGC G STK L +++P A+++G D SP + A+
Sbjct: 33 RKVVDIGCGPGNSTKLLVERWPDAQISGFDTSPDMIDTAK 72
>sp|A9M6C1|TAM_BRUC2 Trans-aconitate 2-methyltransferase OS=Brucella canis (strain ATCC
23365 / NCTC 10854) GN=tam PE=3 SV=1
Length = 255
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 187 RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
R ++DIGC G STK L +++P A+++G D SP + A+
Sbjct: 33 RKVVDIGCGPGNSTKLLVERWPDAQISGFDTSPDMIDTAK 72
>sp|Q8YI91|TAM_BRUME Trans-aconitate 2-methyltransferase OS=Brucella melitensis biotype
1 (strain 16M / ATCC 23456 / NCTC 10094) GN=tam PE=3
SV=2
Length = 255
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 187 RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
R ++DIGC G STK L +++P A+++G D SP + A+
Sbjct: 33 RKVVDIGCGPGNSTKLLVERWPDAQISGFDTSPDMIDTAK 72
>sp|Q82HD9|TAM_STRAW Trans-aconitate 2-methyltransferase OS=Streptomyces avermitilis
(strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804
/ NRRL 8165 / MA-4680) GN=tam PE=3 SV=1
Length = 269
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVA 225
I D+GC G T+ +A+++P+A++TGLD SP LA A
Sbjct: 41 IADLGCGPGNVTRLIAERWPTARITGLDNSPEMLAKA 77
>sp|C5CSI6|TAM_VARPS Trans-aconitate 2-methyltransferase OS=Variovorax paradoxus (strain
S110) GN=tam PE=3 SV=1
Length = 259
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
++D+GC G ST+ LA++FP+AKV G D S LA A+
Sbjct: 35 VVDLGCGPGNSTELLANRFPTAKVVGTDNSEAMLASAR 72
>sp|Q07PZ6|TAM_RHOP5 Trans-aconitate 2-methyltransferase OS=Rhodopseudomonas palustris
(strain BisA53) GN=tam PE=3 SV=1
Length = 256
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 180 QQYAGEIRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKKGGP---RK 236
Q + + R ++DIGC G ST+ L ++P AKVTG+D S L Q +E+ G
Sbjct: 26 QVWLDDPRRVVDIGCGPGNSTELLVKRWPQAKVTGVDNSADML--RQARERLPGHNFIEA 83
Query: 237 NPISWVHAIGEDSGLPSKSFDVV 259
N WV +G + + F V
Sbjct: 84 NIAHWVAPVGTEVVFANAVFQWV 106
>sp|A1AB99|TAM_ECOK1 Trans-aconitate 2-methyltransferase OS=Escherichia coli O1:K1 /
APEC GN=tam PE=3 SV=1
Length = 252
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I I D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IEYIADLGCGTGNSTALLHQRWPAARITGIDSSPAMIAEAR 72
>sp|B3QLI9|UBIE_CHLP8 Demethylmenaquinone methyltransferase OS=Chlorobaculum parvum
(strain NCIB 8327) GN=ubiE PE=3 SV=1
Length = 241
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 174 AIEKHHQQYAGEIR-DILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKKG 232
A +K +Q GE ILD+ G +A K P AKVTG DLSP LA+A+
Sbjct: 50 AAKKARKQVEGEREPKILDVATGTGDLAASMA-KIPGAKVTGYDLSPEMLAIAR------ 102
Query: 233 GPRKNP-ISWVHAIGEDSGLPSKSFDVVSLSYVV 265
+K P I + E +SF VVS + V
Sbjct: 103 --KKYPNIEFHEGFAEKMPFADQSFHVVSAGFGV 134
>sp|A6WZN1|TAM_OCHA4 Trans-aconitate 2-methyltransferase OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=tam PE=3
SV=1
Length = 255
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 187 RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKK 231
R ++DIGC G ST+ L +++P A V+G D SP + A+++ K
Sbjct: 33 RKVVDIGCGPGNSTELLVERWPEADVSGFDTSPDMIEKAKVRLPK 77
>sp|C6Y2G0|TRMN6_PEDHD tRNA1(Val) (adenine(37)-N6)-methyltransferase OS=Pedobacter
heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)
GN=Phep_2972 PE=3 SV=1
Length = 234
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 185 EIRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKKGGPRKNPISWVHA 244
E +ILDIG GV LA +FP+A V +++ A+ K P + +H+
Sbjct: 36 EAANILDIGTGTGVIALMLAQRFPNALVDAVEIDEQ-AALTATKNALNAPFSGRLKVLHS 94
Query: 245 IGEDSGLPSKSFDVVSLS--YVVCLLSNSEH 273
ED LP K +D++ + Y V L N EH
Sbjct: 95 AIEDY-LPEKYYDLIVSNPPYFVNDLKNPEH 124
>sp|A1TP97|TAM_ACIAC Trans-aconitate 2-methyltransferase OS=Acidovorax citrulli (strain
AAC00-1) GN=tam PE=3 SV=1
Length = 260
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
++D+GC G ST+ LA +FP A+VTG+D S L A+
Sbjct: 35 VVDLGCGPGNSTELLAVRFPGARVTGIDTSAAMLQSAR 72
>sp|B6IAS2|TAM_ECOSE Trans-aconitate 2-methyltransferase OS=Escherichia coli (strain
SE11) GN=tam PE=3 SV=1
Length = 252
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I+ + D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IKYVADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEAR 72
>sp|B7LZC1|TAM_ECO8A Trans-aconitate 2-methyltransferase OS=Escherichia coli O8 (strain
IAI1) GN=tam PE=3 SV=1
Length = 252
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I+ + D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IKYVADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEAR 72
>sp|A7ZLX5|TAM_ECO24 Trans-aconitate 2-methyltransferase OS=Escherichia coli O139:H28
(strain E24377A / ETEC) GN=tam PE=3 SV=1
Length = 252
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I+ + D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IKYVADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEAR 72
>sp|Q98K73|TAM_RHILO Trans-aconitate 2-methyltransferase OS=Rhizobium loti (strain
MAFF303099) GN=tam PE=3 SV=1
Length = 256
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 187 RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLK 228
R ++DIGC G ST+ L ++P A+V+G D SP + A+++
Sbjct: 33 RRVVDIGCGPGNSTELLVQRWPDAQVSGFDTSPDMIEKARVR 74
>sp|B1LF96|TAM_ECOSM Trans-aconitate 2-methyltransferase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=tam PE=3 SV=1
Length = 252
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I+ + D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IKYVADLGCGPGNSTALLHQRWPAARITGVDSSPAMIAEAR 72
>sp|B6JIA0|TAM_OLICO Trans-aconitate 2-methyltransferase OS=Oligotropha carboxidovorans
(strain ATCC 49405 / DSM 1227 / OM5) GN=tam PE=3 SV=1
Length = 256
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 185 EIRDILDIGCSVGVSTKCLADKFPSAKVTGLDLS 218
E R I DIGC G ST+ LA ++P AK+ G+D S
Sbjct: 31 EARQIADIGCGPGNSTELLARRWPQAKIIGIDTS 64
>sp|Q1RBP8|TAM_ECOUT Trans-aconitate 2-methyltransferase OS=Escherichia coli (strain
UTI89 / UPEC) GN=tam PE=3 SV=1
Length = 252
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I I D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IEYIADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEAR 72
>sp|B7MMY3|TAM_ECO45 Trans-aconitate 2-methyltransferase OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=tam PE=3 SV=1
Length = 252
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I I D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IEYIADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEAR 72
>sp|B7URP6|TAM_ECO27 Trans-aconitate 2-methyltransferase OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=tam PE=3 SV=1
Length = 252
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I I D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IEYIADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEAR 72
>sp|Q8FHF2|TAM_ECOL6 Trans-aconitate 2-methyltransferase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=tam PE=3 SV=1
Length = 252
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I I D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IEYIADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEAR 72
>sp|B1LXF6|TAM_METRJ Trans-aconitate 2-methyltransferase OS=Methylobacterium
radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
GN=tam PE=3 SV=1
Length = 260
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 187 RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKK 231
R +D+GC G ST +A +FP A+V GLD SP L A+ + +
Sbjct: 33 RLAIDLGCGPGNSTALIAARFPDAEVIGLDTSPAMLESARARLPR 77
>sp|A1W9K6|TAM_ACISJ Trans-aconitate 2-methyltransferase OS=Acidovorax sp. (strain JS42)
GN=tam PE=3 SV=1
Length = 258
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 173 QAIEKHHQQYAGEI---------RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLA 223
Q E H + A E+ R I+D+GC G ST+ L ++FP +++ GLD S LA
Sbjct: 10 QRFESEHTRPAVELLARVSHPAPRHIVDLGCGNGNSTQLLLERFPQSQLIGLDNSEAMLA 69
Query: 224 VAQLKEKKGGP 234
A+ K G P
Sbjct: 70 SAR-KRLPGVP 79
>sp|Q0THR9|TAM_ECOL5 Trans-aconitate 2-methyltransferase OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=tam PE=3 SV=1
Length = 252
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I I D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IEYIADLGCGPGNSTALLDQRWPAARITGIDSSPAMIAEAR 72
>sp|B9MBN9|TAM_ACIET Trans-aconitate 2-methyltransferase OS=Acidovorax ebreus (strain
TPSY) GN=tam PE=3 SV=1
Length = 258
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 187 RDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKKGGP 234
R I+D+GC G ST+ L ++FP +++ GLD S LA A+ K G P
Sbjct: 33 RHIVDLGCGNGNSTQLLLERFPQSQLIGLDNSEAMLASAR-KRLPGVP 79
>sp|B7NIJ1|TAM_ECO7I Trans-aconitate 2-methyltransferase OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=tam PE=3 SV=1
Length = 252
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I + D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IEYVADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEAR 72
>sp|A7GSD9|BIOC_BACCN Malonyl-CoA O-methyltransferase BioC OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=bioC PE=3 SV=1
Length = 285
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 149 MTRRAIPYASSVDKANDVMRGNWLQAIEKHHQQYAGEIRDILDIGCSVGVSTKCLADKFP 208
R A+ Y + + R + L +EK + + A IR IL++GC G T+ L FP
Sbjct: 11 FNRAAVSYDQYANVQKKMAR-HLLSQLEKRYSK-AAAIR-ILELGCGTGYITEKLVHLFP 67
Query: 209 SAKVTGLDLSPYFLAVAQ 226
+A++T +D + +AVA+
Sbjct: 68 NAQITAIDFAESMIAVAK 85
>sp|C6CWS7|BIOC_PAESJ Malonyl-CoA O-methyltransferase BioC OS=Paenibacillus sp. (strain
JDR-2) GN=bioC PE=3 SV=1
Length = 276
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 175 IEKHHQQYAGEIRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKKGGP 234
IE++ + A E + IL+IGC G T+ L +++P +T LDL+P + A+ + K
Sbjct: 39 IERNSRGKATEPK-ILEIGCGTGQFTELLLNQWPHVSITALDLAPAMIHTAEQRFK--SR 95
Query: 235 RKNPISWVHAIGEDSGL--PSKSFDVV 259
+ I ++ A E + PS SFD++
Sbjct: 96 QSANIRFLQADVEIWAVEAPSDSFDLI 122
>sp|B7L7L9|TAM_ECO55 Trans-aconitate 2-methyltransferase OS=Escherichia coli (strain
55989 / EAEC) GN=tam PE=3 SV=1
Length = 252
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I + D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IEYVADLGCGPGNSTALLNQRWPAARITGIDSSPAMIAEAR 72
>sp|B7LRD2|TAM_ESCF3 Trans-aconitate 2-methyltransferase OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tam
PE=3 SV=1
Length = 252
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 186 IRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I + D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 32 IEYVADLGCGPGNSTALLHHRWPAARITGIDSSPAMIAEAR 72
>sp|A9BVK1|TAM_DELAS Trans-aconitate 2-methyltransferase OS=Delftia acidovorans (strain
DSM 14801 / SPH-1) GN=tam PE=3 SV=1
Length = 268
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 185 EIRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ--LKEKKGGPRKNPISWV 242
+ R ++D+GC G ST+ LA ++ A +TG+D S LA A+ L E + + SW
Sbjct: 31 QARHVVDLGCGPGNSTELLAQRYAGATITGIDNSQAMLATARQHLPEARFT-LADIASWT 89
Query: 243 HAIGEDSGLPSKSFDVVSLSYV 264
A GE + P + SL +V
Sbjct: 90 PAPGESA--PDLIYANASLQWV 109
>sp|Q9K3T2|TAM_STRCO Trans-aconitate 2-methyltransferase OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=tam PE=3 SV=1
Length = 303
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
I D+GC G T LAD++P+A++TG D SP L A+
Sbjct: 41 IADLGCGPGNVTVLLADRWPTARITGYDNSPRMLERAR 78
>sp|P76145|TAM_ECOLI Trans-aconitate 2-methyltransferase OS=Escherichia coli (strain
K12) GN=tam PE=1 SV=3
Length = 252
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
+ D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 35 VADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEAR 72
>sp|B1IRU1|TAM_ECOLC Trans-aconitate 2-methyltransferase OS=Escherichia coli (strain
ATCC 8739 / DSM 1576 / Crooks) GN=tam PE=3 SV=1
Length = 252
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
+ D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 35 VADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEAR 72
>sp|B1XEA7|TAM_ECODH Trans-aconitate 2-methyltransferase OS=Escherichia coli (strain K12
/ DH10B) GN=tam PE=3 SV=1
Length = 252
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
+ D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 35 VADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEAR 72
>sp|C4ZWT6|TAM_ECOBW Trans-aconitate 2-methyltransferase OS=Escherichia coli (strain K12
/ MC4100 / BW2952) GN=tam PE=3 SV=1
Length = 252
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
+ D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 35 VADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEAR 72
>sp|Q9K623|BIOC_BACHD Malonyl-CoA O-methyltransferase BioC OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=bioC PE=3 SV=1
Length = 271
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 157 ASSVDKANDVMRG---NWLQAIEKHHQQYAGEIRDILDIGCSVGVSTKCLADKFPSAKVT 213
A D N V R +Q +++ + E R ILDIGC G T+ FP A +
Sbjct: 16 AHLYDGVNHVQRKMAHRLVQLLDEKRRDAKDEPRAILDIGCGTGWLTRECLKSFPQATID 75
Query: 214 GLDLSPYFLAVAQ 226
+DLS L VA+
Sbjct: 76 AVDLSKQMLEVAE 88
>sp|Q2Y6Z3|UBIG_NITMU 3-demethylubiquinone-9 3-methyltransferase OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=ubiG
PE=3 SV=1
Length = 239
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 179 HQQYAGEIRDILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQLKEKKGGPRKN 237
H + AG +D+LD+GC G+ ++ +A+ A+VTG+DL L VA+L + G + N
Sbjct: 52 HARLAG--KDVLDVGCGGGILSESMAES--GAQVTGIDLGDKALKVAKLHLLESGNKVN 106
>sp|Q32G05|TAM_SHIDS Trans-aconitate 2-methyltransferase OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=tam PE=3 SV=1
Length = 252
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 189 ILDIGCSVGVSTKCLADKFPSAKVTGLDLSPYFLAVAQ 226
+ D+GC G ST L ++P+A++TG+D SP +A A+
Sbjct: 35 VADLGCGPGNSTALLHQRWPAARITGIDSSPAMIAEAR 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,538,667
Number of Sequences: 539616
Number of extensions: 3836425
Number of successful extensions: 9851
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 9645
Number of HSP's gapped (non-prelim): 327
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)