Query 048404
Match_columns 148
No_of_seqs 121 out of 1110
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 15:58:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048404.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048404hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 2.3E-53 7.8E-58 303.8 18.8 148 1-148 4-151 (151)
2 2c2v_B Ubiquitin-conjugating e 100.0 8.9E-53 3E-57 301.6 16.9 147 2-148 6-152 (154)
3 2r0j_A Ubiquitin carrier prote 100.0 1.6E-52 5.4E-57 298.8 17.5 147 2-148 2-148 (149)
4 1z2u_A Ubiquitin-conjugating e 100.0 1.8E-52 6.2E-57 298.8 17.7 147 1-147 4-150 (150)
5 1fxt_A Ubiquitin-conjugating e 100.0 8.2E-53 2.8E-57 300.3 15.5 147 1-147 1-149 (149)
6 2ayv_A Ubiquitin-conjugating e 100.0 4.7E-52 1.6E-56 301.0 19.4 146 1-146 21-166 (166)
7 2c4o_A Ubiquitin-conjugating e 100.0 4.8E-52 1.6E-56 300.7 18.8 147 1-147 19-165 (165)
8 1ayz_A UBC2, ubiquitin-conjuga 100.0 1E-51 3.6E-56 299.9 18.3 146 2-147 5-150 (169)
9 1zdn_A Ubiquitin-conjugating e 100.0 6.8E-52 2.3E-56 298.2 17.0 145 2-146 14-158 (158)
10 2aak_A UBC1, ubiquitin conjuga 100.0 1.7E-51 5.9E-56 294.4 18.7 146 2-147 5-150 (152)
11 1jat_A Ubiquitin-conjugating e 100.0 3.9E-52 1.3E-56 298.5 15.3 148 1-148 5-152 (155)
12 3h8k_A Ubiquitin-conjugating e 100.0 2.8E-51 9.6E-56 296.6 19.5 147 2-148 4-164 (164)
13 1yh2_A HSPC150 protein similar 100.0 3.8E-51 1.3E-55 297.1 19.5 147 2-148 5-155 (169)
14 2bep_A Ubiquitin-conjugating e 100.0 3.7E-51 1.3E-55 294.6 18.7 147 2-148 9-159 (159)
15 2e2c_A Ubiquitin conjugating e 100.0 3.2E-51 1.1E-55 294.1 18.2 147 1-148 9-155 (156)
16 3rcz_B SUMO-conjugating enzyme 100.0 6.2E-51 2.1E-55 294.3 17.9 146 2-147 11-163 (163)
17 3bzh_A Ubiquitin-conjugating e 100.0 1.7E-50 6E-55 299.0 19.3 146 2-147 49-194 (194)
18 2ucz_A UBC7, ubiquitin conjuga 100.0 1.3E-50 4.4E-55 293.3 18.2 146 2-147 5-164 (165)
19 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.2E-50 4.1E-55 299.5 18.2 147 1-147 32-192 (193)
20 2pwq_A Ubiquitin conjugating e 100.0 1.1E-50 3.6E-55 304.4 17.6 147 2-148 24-171 (216)
21 3k9o_A Ubiquitin-conjugating e 100.0 2.2E-50 7.5E-55 300.4 19.0 148 1-148 5-156 (201)
22 2gjd_A Ubiquitin-conjugating e 100.0 1.3E-50 4.5E-55 291.2 16.9 146 2-147 5-157 (157)
23 1i7k_A Ubiquitin-conjugating e 100.0 1.5E-50 5E-55 296.0 16.3 147 1-148 30-176 (179)
24 1wzv_A Ubiquitin-conjugating e 100.0 2.2E-50 7.7E-55 289.4 16.5 147 1-148 4-152 (155)
25 2grr_A Ubiquitin-conjugating e 100.0 3E-50 1E-54 290.3 17.1 147 2-148 8-161 (161)
26 1tte_A Ubiquitin-conjugating e 100.0 4.3E-50 1.5E-54 300.9 13.2 148 1-148 2-151 (215)
27 3e46_A Ubiquitin-conjugating e 100.0 3.4E-49 1.2E-53 302.1 18.2 147 2-148 58-208 (253)
28 3fn1_B NEDD8-conjugating enzym 100.0 5.9E-49 2E-53 285.1 18.3 145 2-147 15-167 (167)
29 3rz3_A Ubiquitin-conjugating e 100.0 8.7E-49 3E-53 287.9 17.6 146 2-147 8-173 (183)
30 2onu_A Ubiquitin-conjugating e 100.0 1.6E-49 5.6E-54 284.0 12.2 144 2-148 3-148 (152)
31 1yrv_A Ubiquitin-conjugating l 100.0 8.9E-49 3.1E-53 284.4 15.5 142 2-144 24-168 (169)
32 1c4z_D UBCH7, ubiquitin conjug 100.0 2.1E-49 7.3E-54 284.0 11.0 147 1-148 2-150 (154)
33 2awf_A Ubiquitin-conjugating e 100.0 1.3E-48 4.3E-53 284.5 14.8 141 1-141 17-172 (172)
34 2z5d_A Ubiquitin-conjugating e 100.0 1.7E-48 5.8E-53 284.9 13.6 142 2-147 26-169 (179)
35 1y8x_A Ubiquitin-conjugating e 100.0 7.6E-48 2.6E-52 277.5 16.3 140 2-144 7-147 (160)
36 2y9m_A Ubiquitin-conjugating e 100.0 2.3E-47 7.9E-52 277.9 17.9 146 2-147 7-168 (172)
37 4ddg_A Ubiquitin-conjugating e 100.0 1.4E-47 4.8E-52 310.5 17.9 148 1-148 3-150 (399)
38 2nvu_C NEDD8-conjugating enzym 100.0 4.2E-47 1.4E-51 278.1 16.3 140 2-144 27-167 (180)
39 1yf9_A Ubiquitin carrier prote 100.0 3.7E-47 1.3E-51 276.4 14.4 142 2-147 13-156 (171)
40 3o2u_A NEDD8-conjugating enzym 100.0 3.5E-46 1.2E-50 275.3 15.2 141 2-145 30-177 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 8.4E-45 2.9E-49 263.3 13.1 138 2-139 9-163 (167)
42 2q0v_A Ubiquitin-conjugating e 100.0 4.8E-43 1.7E-47 251.2 11.1 128 2-130 22-156 (156)
43 3ceg_A Baculoviral IAP repeat- 100.0 1.9E-42 6.5E-47 271.7 15.0 146 2-147 77-243 (323)
44 2fo3_A Ubiquitin-conjugating e 100.0 4E-42 1.4E-46 238.5 13.4 115 2-116 7-122 (125)
45 2h2y_A Ubiquitin-conjugating e 100.0 2.9E-41 1E-45 237.2 14.8 114 2-115 21-135 (136)
46 2a4d_A Ubiquitin-conjugating e 100.0 2.3E-41 8E-46 243.1 13.4 123 2-124 26-156 (160)
47 1jat_B Ubiquitin-conjugating e 100.0 4.2E-42 1.4E-46 242.1 7.7 125 2-127 7-138 (138)
48 2hlw_A Ubiquitin-conjugating e 100.0 9.3E-41 3.2E-45 242.3 9.7 123 2-124 36-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 6.6E-40 2.2E-44 230.1 13.3 109 3-111 24-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 1.5E-38 5.2E-43 234.0 15.6 116 1-118 14-132 (187)
51 1zuo_A Hypothetical protein LO 100.0 2.6E-39 9E-44 237.8 5.3 137 2-146 28-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 9.3E-29 3.2E-33 176.1 3.1 96 3-104 34-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.1E-20 7E-25 133.9 9.7 113 4-117 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 2.1E-20 7.1E-25 130.5 0.9 95 3-103 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 1.4E-14 4.9E-19 101.9 8.9 101 6-112 25-138 (146)
56 2ebm_A RWD domain-containing p 97.1 0.0071 2.4E-07 40.7 9.7 66 4-71 13-78 (128)
57 2day_A Ring finger protein 25; 96.7 0.016 5.6E-07 38.8 9.0 68 5-72 12-83 (128)
58 2yz0_A Serine/threonine-protei 96.2 0.053 1.8E-06 36.7 9.2 66 5-71 14-85 (138)
59 3zqs_A E3 ubiquitin-protein li 95.8 0.13 4.4E-06 37.1 10.1 85 4-112 4-88 (186)
60 2daw_A RWD domain containing p 95.6 0.24 8.1E-06 34.3 10.7 24 49-72 76-99 (154)
61 2ebk_A RWD domain-containing p 94.7 0.12 4.2E-06 34.5 6.8 65 5-70 11-78 (128)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 94.7 0.2 6.7E-06 33.7 7.9 67 4-71 13-86 (137)
63 2dax_A Protein C21ORF6; RWD do 91.0 0.18 6.3E-06 34.7 3.4 25 48-72 73-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 76.3 2 6.8E-05 20.0 2.0 19 3-21 7-25 (26)
65 2cwb_A Chimera of immunoglobul 74.8 0.61 2.1E-05 30.6 0.0 34 114-147 22-55 (108)
66 1zoq_C CREB-binding protein, i 39.3 15 0.00052 19.9 1.5 43 103-147 3-46 (47)
67 2bum_A Protocatechuate 3,4-dio 31.9 44 0.0015 24.1 3.6 26 45-70 108-138 (209)
68 2f4m_B UV excision repair prot 31.0 50 0.0017 19.0 3.0 20 119-138 37-56 (61)
69 1kbh_B CREB-binding protein, n 30.6 77 0.0026 18.0 5.4 45 103-148 10-54 (59)
70 1pve_A HHR23B, UV excision rep 28.8 50 0.0017 19.7 2.8 22 118-139 38-59 (72)
71 3s7v_A Major capsid protein VP 27.2 1.4E+02 0.0046 22.4 5.4 44 40-86 194-239 (277)
72 2cu9_A Spcia1, histone chapero 24.0 1.5E+02 0.005 20.6 4.9 37 30-66 37-86 (161)
73 2jrw_A Cyclic extended PEP.1; 23.2 20 0.00069 16.5 0.2 16 61-76 4-19 (26)
74 3g9r_A Fusion complex of HIV-1 21.9 60 0.0021 17.0 1.9 12 3-14 30-41 (42)
75 1sid_A Polyomavirus coat prote 21.5 1.7E+02 0.0059 22.9 5.3 39 45-86 234-274 (383)
76 1vps_A Polyomavirus VP1 pentam 21.4 2.2E+02 0.0074 21.5 5.6 44 40-86 198-243 (289)
77 3zqs_A E3 ubiquitin-protein li 21.3 1.1E+02 0.0037 21.7 3.8 54 48-106 124-179 (186)
78 2fkn_A Urocanate hydratase; ro 20.5 1.1E+02 0.0037 25.4 4.1 26 121-146 278-303 (552)
79 2c5k_P Vacuolar protein sortin 20.4 51 0.0017 15.6 1.3 12 4-15 13-24 (26)
80 2k6w_A Putative uncharacterize 20.3 1.1E+02 0.0039 19.8 3.6 27 32-58 81-107 (120)
81 1x87_A Urocanase protein; stru 20.3 1.1E+02 0.0038 25.3 4.1 26 121-146 277-302 (551)
82 2ccv_A Helix pomatia agglutini 20.3 1.5E+02 0.005 18.6 4.0 23 47-70 28-50 (101)
83 1uwk_A Urocanate hydratase; hy 20.1 1.1E+02 0.0038 25.3 4.1 26 121-146 282-307 (557)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.3e-53 Score=303.80 Aligned_cols=148 Identities=66% Similarity=1.218 Sum_probs=145.5
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|.|||++|+++++++++.|+++.+.++|+++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 83 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK 83 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999984
No 2
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.9e-53 Score=301.60 Aligned_cols=147 Identities=46% Similarity=0.870 Sum_probs=142.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 6 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 85 (154)
T 2c2v_B 6 LPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 85 (154)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 86 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp CBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999975
No 3
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.6e-52 Score=298.85 Aligned_cols=147 Identities=48% Similarity=0.898 Sum_probs=144.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
+.+||++|+++|++++++|+++.+.++|+++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999985
No 4
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.8e-52 Score=298.84 Aligned_cols=147 Identities=78% Similarity=1.401 Sum_probs=144.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 83 (150)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996
No 5
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=8.2e-53 Score=300.33 Aligned_cols=147 Identities=47% Similarity=0.923 Sum_probs=144.2
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCC-CcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceee
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~-n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~ 79 (148)
||.+||++|+++|++++++|+++.+.++ |+++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 1 ~~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 1 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CCHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred ChHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 6899999999999999999999999987 999999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 80 S-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 80 ~-~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
. +|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 8 9999999999999999999999999999999999999999999999999999999999999999996
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-52 Score=300.96 Aligned_cols=146 Identities=79% Similarity=1.373 Sum_probs=143.7
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 21 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 100 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS 100 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhh
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 146 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999997
No 7
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=4.8e-52 Score=300.72 Aligned_cols=147 Identities=80% Similarity=1.391 Sum_probs=144.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 19 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~ 98 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 98 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996
No 8
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1e-51 Score=299.92 Aligned_cols=146 Identities=38% Similarity=0.828 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+.+.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~ 84 (169)
T 1ayz_A 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYAN 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 85 GEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp SBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999986
No 9
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.8e-52 Score=298.15 Aligned_cols=145 Identities=39% Similarity=0.704 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.|||++|+++|++++++|+++.+.++|+++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 93 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN 93 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhh
Q 048404 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 146 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 94 G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 94 GEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp SBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999997
No 10
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.7e-51 Score=294.37 Aligned_cols=146 Identities=45% Similarity=0.884 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (152)
T 2aak_A 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 150 (152)
T 2aak_A 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150 (152)
T ss_dssp SBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999999999999999996
No 11
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=3.9e-52 Score=298.54 Aligned_cols=148 Identities=46% Similarity=0.827 Sum_probs=144.6
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+|.+||++|+++|++++++|+++.+.++|+++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 85 LGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999973
No 12
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.8e-51 Score=296.56 Aligned_cols=147 Identities=39% Similarity=0.795 Sum_probs=143.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCC-CcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~-n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
|.|||++|+++++++++.|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~ 83 (164)
T 3h8k_A 4 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYP 83 (164)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCC
Confidence 789999999999999999999999876 9999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCcc-------------cccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 81 NGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~-------------~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|. ++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 84 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 84 DGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSLG 163 (164)
T ss_dssp TSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred CCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 9999999996 789999999999999999999999999999999999999999999999999999987
Q ss_pred C
Q 048404 148 G 148 (148)
Q Consensus 148 ~ 148 (148)
+
T Consensus 164 ~ 164 (164)
T 3h8k_A 164 L 164 (164)
T ss_dssp C
T ss_pred C
Confidence 5
No 13
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-51 Score=297.13 Aligned_cols=147 Identities=41% Similarity=0.803 Sum_probs=144.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~ 84 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSA 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeecCcc----cccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 82 GSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 82 G~icl~~l~----~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 155 (169)
T 1yh2_A 85 GRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQ 155 (169)
T ss_dssp CBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccc
Confidence 999999998 8999999999999999999999999999999999999999999999999999999974
No 14
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.7e-51 Score=294.62 Aligned_cols=147 Identities=44% Similarity=0.824 Sum_probs=143.0
Q ss_pred hHHHHHHHHHHhhcC---CCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeecccccee
Q 048404 2 ASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNI 78 (148)
Q Consensus 2 a~rRL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv 78 (148)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 9 a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni 88 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 88 (159)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCC
Confidence 689999999999985 58899999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 79 N-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 79 ~-~~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+ .+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+|
T Consensus 89 ~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 89 SSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp CTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 9 499999999999999999999999999999999999999999999999999999999999999999987
No 15
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.2e-51 Score=294.07 Aligned_cols=147 Identities=37% Similarity=0.720 Sum_probs=143.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
.|.+||++|+++|+++++.|+++.+.++|+++|+++|.||+||+|+||.|+++|.||++||++||+|+|.+++|||||+.
T Consensus 9 ~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 88 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ 88 (156)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++| +|+++|.++||+|+++||.+
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 89 SGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred CceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999 89999999999999999854
No 16
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=6.2e-51 Score=294.30 Aligned_cols=146 Identities=38% Similarity=0.779 Sum_probs=141.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCC-----CcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccc
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~-----n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hp 76 (148)
|.+||++|+++|+++++.|+++.|.++ |+++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 789999999999999999999999876 999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCceeecCccc--ccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 77 NINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||-
T Consensus 91 nV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 91 NVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999999999999975 49999999999999999999999999999999999999999999999999999983
No 17
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.7e-50 Score=299.00 Aligned_cols=146 Identities=62% Similarity=1.150 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~ 81 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||+||+|+||+|+|+|.||++||+.||+|+|.+++|||||+.+
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 128 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ 128 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 82 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|++|+++||+
T Consensus 129 G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 129 GVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999999996
No 18
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-50 Score=293.35 Aligned_cols=146 Identities=40% Similarity=0.836 Sum_probs=141.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecC-CCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVA-EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~-~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
|.|||++|+++|+++++.|+++.+.+ +|+++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~ 84 (165)
T 2ucz_A 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYP 84 (165)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCC
Confidence 68999999999999999999999986 69999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCc-------------ccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 81 NGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l-------------~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 85 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 85 NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLG 164 (165)
T ss_dssp TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhh
Confidence 999999999 6789999999999999999999999999999999999999999999999999999874
No 19
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-50 Score=299.54 Aligned_cols=147 Identities=47% Similarity=0.865 Sum_probs=140.7
Q ss_pred ChHHHHHHHHHHhhcCCC-------------CCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCee
Q 048404 1 MASKRILKELKDLQKDPP-------------TSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKV 67 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~-------------~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v 67 (148)
+|.|||++|+++|+++++ .|+++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 478999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccceee-CCCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhh
Q 048404 68 AFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 146 (148)
Q Consensus 68 ~f~~~i~Hpnv~-~~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya 191 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFA 191 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 999999999999 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 048404 147 M 147 (148)
Q Consensus 147 ~ 147 (148)
+
T Consensus 192 ~ 192 (193)
T 2f4z_A 192 K 192 (193)
T ss_dssp C
T ss_pred c
Confidence 7
No 20
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.1e-50 Score=304.37 Aligned_cols=147 Identities=48% Similarity=0.906 Sum_probs=144.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceee-C
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~-~ 80 (148)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||+ .
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~ 103 (216)
T 2pwq_A 24 ELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQ 103 (216)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 104 ~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~ 171 (216)
T 2pwq_A 104 TGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATG 171 (216)
T ss_dssp TCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999974
No 21
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=2.2e-50 Score=300.39 Aligned_cols=148 Identities=44% Similarity=0.832 Sum_probs=143.5
Q ss_pred ChHHHHHHHHHHhhcC---CCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccce
Q 048404 1 MASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 77 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpn 77 (148)
+|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 5 ~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 84 (201)
T 3k9o_A 5 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 84 (201)
T ss_dssp TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCC
Confidence 4789999999999987 4789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeC-CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 78 INS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 78 v~~-~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|+. +|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 v~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 85 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 994 99999999999999999999999999999999999999999999999999999999999999999985
No 22
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.3e-50 Score=291.16 Aligned_cols=146 Identities=36% Similarity=0.740 Sum_probs=141.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecC-----CCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccc
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVA-----EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~-----~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hp 76 (148)
|.|||++|+++|+++++.|+++.|.+ +|+++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++|||
T Consensus 5 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 84 (157)
T 2gjd_A 5 CLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHP 84 (157)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccC
Confidence 68999999999999999999999875 4899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCceeecCccc--ccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 77 NINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
||+.+|.||+++|.. +|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 85 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 85 NVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999976 79999999999999999999999999999999999999999999999999999996
No 23
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-50 Score=296.04 Aligned_cols=147 Identities=33% Similarity=0.620 Sum_probs=143.0
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
.|.+||++|+++|+++++.|+++.+.++|+++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 30 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~ 109 (179)
T 1i7k_A 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT 109 (179)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| +|+++|.++|+++++++++|
T Consensus 110 ~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 110 QGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred CCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999 99999999999999999875
No 24
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=2.2e-50 Score=289.42 Aligned_cols=147 Identities=37% Similarity=0.779 Sum_probs=142.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCeee-eecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceee
Q 048404 1 MASKRILKELKDLQKDPPTSCSA-GPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~-~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~ 79 (148)
+|.+||++|+++|+++++.|+.+ .+.++|+++|+++|. |++|+|+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 47899999999999999999999 788899999999999 9999999999999999999999999999999999999999
Q ss_pred CCCceeecCc-ccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 80 SNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 80 ~~G~icl~~l-~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
.+|.||+++| .++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999 89999999999999999999999999999999999999999999999999999999973
No 25
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3e-50 Score=290.34 Aligned_cols=147 Identities=37% Similarity=0.743 Sum_probs=141.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecC-----CCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccc
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVA-----EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~-----~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hp 76 (148)
|.+||++|+++|+++++.|+.+.+.. +|+++|+++|.||+||+|+||+|+++|.||++||++||+|+|.+++|||
T Consensus 8 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 87 (161)
T 2grr_A 8 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHP 87 (161)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccC
Confidence 57999999999999999999998874 6899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCceeecCccc--ccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 77 NINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
||+.+|.||+++|.. +|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 88 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 88 NVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred CCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 999999999999975 899999999999999999999999999999999999999999999999999999985
No 26
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=4.3e-50 Score=300.88 Aligned_cols=148 Identities=45% Similarity=0.905 Sum_probs=143.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCCC-cceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceee
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~n-~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~ 79 (148)
+|.+||++|+++|++++++|+++.+.++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 47899999999999999999999998874 66999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 80 S-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 80 ~-~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
. +|.||+++|.++|+|++|+.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|++|+++||++
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 8 99999999999999999999999999999999999999999999999999999999999999999974
No 27
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=3.4e-49 Score=302.09 Aligned_cols=147 Identities=44% Similarity=0.824 Sum_probs=143.0
Q ss_pred hHHHHHHHHHHhhcC---CCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeecccccee
Q 048404 2 ASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNI 78 (148)
Q Consensus 2 a~rRL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv 78 (148)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 58 a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 137 (253)
T 3e46_A 58 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 137 (253)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCc
Confidence 689999999999987 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 79 N-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 79 ~-~~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|++|+++||++
T Consensus 138 ~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 138 SSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp CTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9 599999999999999999999999999999999999999999999999999999999999999999985
No 28
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=5.9e-49 Score=285.14 Aligned_cols=145 Identities=34% Similarity=0.637 Sum_probs=139.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeec-CCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPV-AEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~-~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
+.|||++|+++|+++++.|+++.+. ++|+..|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 15 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 93 (167)
T 3fn1_B 15 RDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITE 93 (167)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCC
Confidence 5799999999999999999999865 47899999999 899999999999999999999999999999999999999999
Q ss_pred CCceeecCccc------ccCCCcCHHHHHHHHHHhhcC-CCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 81 NGSICLDILKE------QWSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~~------~W~p~~~i~~il~~l~~~l~~-p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.. +|+|+++|.+||.+|+++|.+ |++++|+|.|||++|++|+++|.++||+|+++||+
T Consensus 94 ~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 94 TGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp TCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999975 799999999999999999999 69999999999999999999999999999999996
No 29
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=8.7e-49 Score=287.91 Aligned_cols=146 Identities=36% Similarity=0.749 Sum_probs=139.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeee-ecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
|.|||++|+++|+++++.|+++. +.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||||++
T Consensus 8 a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 87 (183)
T 3rz3_A 8 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYE 87 (183)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCC
Confidence 68999999999999999999999 66789999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCcc-------------cccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhH------CHHHHHHHHHHH
Q 048404 81 NGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS------DKAKYEATARSW 141 (148)
Q Consensus 81 ~G~icl~~l~-------------~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~------~~~~f~~~~~~~ 141 (148)
+|.||+++|. ++|+|+++|.+||.+|+++|.+||+++|+|.+||.+|++ ++++|.++|+++
T Consensus 88 ~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~ 167 (183)
T 3rz3_A 88 TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQ 167 (183)
T ss_dssp TSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHHHH
Confidence 9999999996 789999999999999999999999999999999999998 789999999999
Q ss_pred HHHhhC
Q 048404 142 TQKYAM 147 (148)
Q Consensus 142 ~~~~a~ 147 (148)
+++++.
T Consensus 168 v~~s~~ 173 (183)
T 3rz3_A 168 VLGTKV 173 (183)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998763
No 30
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.6e-49 Score=284.01 Aligned_cols=144 Identities=30% Similarity=0.636 Sum_probs=138.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC-
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS- 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~- 80 (148)
|.|||++|++++++. |+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~ 79 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEA 79 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCc
Confidence 679999999999873 7889999999999999999999999999999999999999999999999999999999994
Q ss_pred CCceeecCcccccCCCcCHHHHHHH-HHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~-l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 80 ~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 80 SGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp TCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred CCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999 6899999999999999999999999999999999999999974
No 31
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.9e-49 Score=284.42 Aligned_cols=142 Identities=33% Similarity=0.638 Sum_probs=137.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeecccccee-eC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNI-NS 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv-~~ 80 (148)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||||| +.
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~ 103 (169)
T 1yrv_A 24 AYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPH 103 (169)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999 68
Q ss_pred CCceeecCcc--cccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHH
Q 048404 81 NGSICLDILK--EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQK 144 (148)
Q Consensus 81 ~G~icl~~l~--~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~ 144 (148)
+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++ ++++++
T Consensus 104 ~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 104 TGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp TCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9999999998 89999999999999999999999999999999999999999999999 888764
No 32
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=2.1e-49 Score=284.05 Aligned_cols=147 Identities=37% Similarity=0.825 Sum_probs=137.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeee-cCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceee
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGP-VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~-~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~ 79 (148)
+|.+||++|+++|+++++.|+.+.+ .++|+++|+++|. |+||+|+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 4679999999999999999998654 5689999999997 9999999999999999999999999999999999999999
Q ss_pred CCCceeecCcc-cccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 80 SNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 80 ~~G~icl~~l~-~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
.+|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 99999999996 8999999999999999999999999999999999999999999999999999999974
No 33
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1.3e-48 Score=284.47 Aligned_cols=141 Identities=37% Similarity=0.842 Sum_probs=109.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecC-CCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceee
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVA-EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~-~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~ 79 (148)
.|.|||++|+++|+++++.|+++.+.+ +|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.|++|||||+
T Consensus 17 ~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~ 96 (172)
T 2awf_A 17 RGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVD 96 (172)
T ss_dssp TTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCC
Confidence 368999999999999999999999976 6999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeecCcc-------------cccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHH-HHHHHHHHH
Q 048404 80 SNGSICLDILK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKA-KYEATARSW 141 (148)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~-~f~~~~~~~ 141 (148)
.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|++ +|+++||+|
T Consensus 97 ~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 97 KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp TTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 99999999996 689999999999999999999999999999999999999999 999999875
No 34
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.7e-48 Score=284.90 Aligned_cols=142 Identities=32% Similarity=0.708 Sum_probs=136.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC-
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS- 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~- 80 (148)
|.|||++|+++|+. +|+++.+. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 26 a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~ 101 (179)
T 2z5d_A 26 GKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEA 101 (179)
T ss_dssp HHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCC
Confidence 57999999999985 57888887 67999999999999999999999999999999999999999999999999998
Q ss_pred CCceeecCcccccCCCcCHHHHHHH-HHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~-l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|++++.+||.+ |+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 102 ~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 102 SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp TCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred CCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999 999999999999999999999999999999999999999996
No 35
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.6e-48 Score=277.48 Aligned_cols=140 Identities=33% Similarity=0.721 Sum_probs=135.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeeee-ecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
|.+||++|+++| ++++|+++. +.++|+++|+++| ||++|+|+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 7 ~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (160)
T 1y8x_A 7 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 83 (160)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCC
Confidence 789999999999 567899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHH
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQK 144 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~ 144 (148)
+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|+++++.
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 84 EGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999874
No 36
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.3e-47 Score=277.86 Aligned_cols=146 Identities=33% Similarity=0.665 Sum_probs=137.0
Q ss_pred hHHHHHHHHHHhhc-C-C------CC---Ceeeee-cCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEE
Q 048404 2 ASKRILKELKDLQK-D-P------PT---SCSAGP-VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAF 69 (148)
Q Consensus 2 a~rRL~~E~~~l~~-~-~------~~---~~~~~~-~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f 69 (148)
|.+||++|+++|++ + + +. ++.+.+ .++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 57999999999998 4 3 32 456777 67899999999999999999999999999999999999999999
Q ss_pred ee-ccccceee-CCCceeecCcc-cccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhH-CHHHHHHHHHHHHHHh
Q 048404 70 RT-KVFHPNIN-SNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS-DKAKYEATARSWTQKY 145 (148)
Q Consensus 70 ~~-~i~Hpnv~-~~G~icl~~l~-~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~-~~~~f~~~~~~~~~~~ 145 (148)
.| ++|||||+ .+|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+|.+||++|++ |+++|.++||+|++++
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~~ 166 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAER 166 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99 99999996 79999999998 899999999999999999999999999999999999999 9999999999999998
Q ss_pred hC
Q 048404 146 AM 147 (148)
Q Consensus 146 a~ 147 (148)
+.
T Consensus 167 ~~ 168 (172)
T 2y9m_A 167 ER 168 (172)
T ss_dssp HC
T ss_pred Hh
Confidence 63
No 37
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.4e-47 Score=310.45 Aligned_cols=148 Identities=79% Similarity=1.371 Sum_probs=145.5
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
||.|||++|+++|++++++|+++.|.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||++
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
+|.||+++|.++|+|++|+.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred CCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999975
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.2e-47 Score=278.14 Aligned_cols=140 Identities=32% Similarity=0.695 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeeee-ecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
|.+||++|+++| ++++|+++. +.++|+++|+++| ||++|+|+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 27 ~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~ 103 (180)
T 2nvu_C 27 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 103 (180)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC
Confidence 679999999999 578899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHH
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQK 144 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~ 144 (148)
+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|+++++.
T Consensus 104 ~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 104 EGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp TSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999874
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-47 Score=276.38 Aligned_cols=142 Identities=27% Similarity=0.651 Sum_probs=134.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceee-C
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~-~ 80 (148)
|.+||++|+++|++++. + + +.++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.|++|||||+ .
T Consensus 13 ~~~RL~~El~~l~~~~~-~--v-~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~ 88 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTR-K--V-YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDER 88 (171)
T ss_dssp CCHHHHHHHHHHHSSSS-C--E-EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCC-C--C-CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCccc
Confidence 46999999999999874 3 3 3578999999999999999999999999999999999999999999999999999 4
Q ss_pred CCceeecCcccccCCCcCHHHHHHHH-HHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSI-CSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l-~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
+|.||+++|.++|+|++++.+||.+| +++|.+|++++|+|.+||++|++|+++|.++|++|+++||+
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 89 SGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp TCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999997 79999999999999999999999999999999999999996
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=3.5e-46 Score=275.35 Aligned_cols=141 Identities=30% Similarity=0.612 Sum_probs=135.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeee----ecCCCcc---eEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccc
Q 048404 2 ASKRILKELKDLQKDPPTSCSAG----PVAEDMF---HWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF 74 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~----~~~~n~~---~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~ 74 (148)
|.+||++|+++|+ +++++++. +.++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 30 a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 30 ARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp HHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 6899999999998 77899998 7889999 9999996 88899999999999999999999999999999999
Q ss_pred cceeeCCCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHh
Q 048404 75 HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKY 145 (148)
Q Consensus 75 Hpnv~~~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~ 145 (148)
||||+.+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++..
T Consensus 107 HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 107 HPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp CTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred cCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998654
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=8.4e-45 Score=263.28 Aligned_cols=138 Identities=28% Similarity=0.590 Sum_probs=130.4
Q ss_pred hHHHHHHHHHHhhcCC------------CCCeeeeecCCCcceEEEEEECCCCCCCC--CCEEEEEEEeCCCCCCCCCee
Q 048404 2 ASKRILKELKDLQKDP------------PTSCSAGPVAEDMFHWQATIMGPPDSPYA--GGVFLVTIHFPPDYPFKPPKV 67 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~------------~~~~~~~~~~~n~~~w~~~i~gp~~t~y~--g~~f~~~i~fp~~yP~~pP~v 67 (148)
|.|||++|+++|++++ ..++.+.+.++|+++|+++|.||+||+|+ ||.|+++|.||++||++||+|
T Consensus 9 a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v 88 (167)
T 4ds2_A 9 SNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTV 88 (167)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEE
Confidence 6799999999999976 78899999999999999999999999999 999999999999999999999
Q ss_pred EEeeccccceeeCCCceeecCcccccCCCcCHHHHHH-HHHHhhcC--CCCCCCccHHHHHHHhHCHHHHHHHHH
Q 048404 68 AFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLL-SICSLLTD--PNPDDPLVPEIAHMYKSDKAKYEATAR 139 (148)
Q Consensus 68 ~f~~~i~Hpnv~~~G~icl~~l~~~W~p~~~i~~il~-~l~~~l~~--p~~~~~~n~ea~~~~~~~~~~f~~~~~ 139 (148)
+|.+++|||||+.+|.||+++|.++|+|++++.++|. .|++++.. |++++|+|.|||++|++|+++|.++||
T Consensus 89 ~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 89 RFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp EESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred EEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 9999999999999999999999999999999999754 67777764 899999999999999999999999998
No 42
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=4.8e-43 Score=251.23 Aligned_cols=128 Identities=28% Similarity=0.507 Sum_probs=118.9
Q ss_pred hHHHHHHHHHHhhcC-CCCCeeeeecC-C--CcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccce
Q 048404 2 ASKRILKELKDLQKD-PPTSCSAGPVA-E--DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 77 (148)
Q Consensus 2 a~rRL~~E~~~l~~~-~~~~~~~~~~~-~--n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpn 77 (148)
+.+||++|+++++++ ++.++++.+.+ + |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||||
T Consensus 22 ~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 101 (156)
T 2q0v_A 22 RSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSC 101 (156)
T ss_dssp HHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCC
Confidence 679999999999998 88999998864 2 5999999999999999999999999999999999999999999999999
Q ss_pred eeCCCce---eecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHC
Q 048404 78 INSNGSI---CLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSD 130 (148)
Q Consensus 78 v~~~G~i---cl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~ 130 (148)
|+.+|.| |++++. +|+|++++.+||.+|+++|.+|++++|+|++||++|++|
T Consensus 102 V~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 102 VDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp BCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred CccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 9999999 888886 599999999999999999999999999999999998765
No 43
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.9e-42 Score=271.73 Aligned_cols=146 Identities=33% Similarity=0.586 Sum_probs=136.1
Q ss_pred hHHHHHHHHHHhhcCCCCC----eeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeec-----
Q 048404 2 ASKRILKELKDLQKDPPTS----CSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTK----- 72 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~----~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~----- 72 (148)
+.+||++|+++|+++++.+ +.+.+.++|+..|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 5799999999999987764 4567788999999999999999999999999999999999999999999998
Q ss_pred cccceeeCCCceeecCcc-------cccCCCc-CHHHHHHHHHHhhc--CCCCCCCccHHH--HHHHhHCHHHHHHHHHH
Q 048404 73 VFHPNINSNGSICLDILK-------EQWSPAL-TISKVLLSICSLLT--DPNPDDPLVPEI--AHMYKSDKAKYEATARS 140 (148)
Q Consensus 73 i~Hpnv~~~G~icl~~l~-------~~W~p~~-~i~~il~~l~~~l~--~p~~~~~~n~ea--~~~~~~~~~~f~~~~~~ 140 (148)
+|||||+.+|.||+++|. ++|+|++ +|.+||.+|+++|. +|++++|+|.++ +.++.+|+++|.++|+.
T Consensus 157 ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~ 236 (323)
T 3ceg_A 157 RFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQ 236 (323)
T ss_dssp CCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHH
Confidence 999999999999999996 6899999 89999999999996 677899999987 57899999999999999
Q ss_pred HHHHhhC
Q 048404 141 WTQKYAM 147 (148)
Q Consensus 141 ~~~~~a~ 147 (148)
|+++|||
T Consensus 237 ~t~k~A~ 243 (323)
T 3ceg_A 237 ATVKWAM 243 (323)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9999997
No 44
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=4e-42 Score=238.46 Aligned_cols=115 Identities=37% Similarity=0.709 Sum_probs=106.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeecc-ccceeeC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINS 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i-~Hpnv~~ 80 (148)
|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 7 a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 86 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYS 86 (125)
T ss_dssp --CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCCC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 116 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~ 116 (148)
+|.||+++|.++|+|++|+.+||.+|+++|.+|+.+
T Consensus 87 ~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 87 NGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999864
No 45
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.9e-41 Score=237.20 Aligned_cols=114 Identities=38% Similarity=0.720 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeecc-ccceeeC
Q 048404 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINS 80 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i-~Hpnv~~ 80 (148)
|.+||++|+++++++++.|+.+.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 21 ~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 100 (136)
T 2h2y_A 21 ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYS 100 (136)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCceeecCcccccCCCcCHHHHHHHHHHhhcCCCC
Q 048404 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 115 (148)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~l~~~l~~p~~ 115 (148)
+|.||+++|.++|+|++++.+||.+|+++|.+|+.
T Consensus 101 ~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 101 NGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 99999999999999999999999999999999874
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.3e-41 Score=243.15 Aligned_cols=123 Identities=32% Similarity=0.516 Sum_probs=115.0
Q ss_pred hHHHHHHHHHHhhcCCCCC-eeeeec-CCC--cceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccce
Q 048404 2 ASKRILKELKDLQKDPPTS-CSAGPV-AED--MFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 77 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~-~~~~~~-~~n--~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpn 77 (148)
+.|||++|+++|++++++| +.+.+. ++| +++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 5789999999999998888 777774 444 999999999999999999999999999999999999999999999999
Q ss_pred ee-CCCceeecCcc--cccCCCcCHHHHHHHHHHhhc-CCCCCCCccHHHH
Q 048404 78 IN-SNGSICLDILK--EQWSPALTISKVLLSICSLLT-DPNPDDPLVPEIA 124 (148)
Q Consensus 78 v~-~~G~icl~~l~--~~W~p~~~i~~il~~l~~~l~-~p~~~~~~n~ea~ 124 (148)
|+ .+|.||+++|. ++|+|++++++||.+|+++|. +||+++|+|.|||
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred EECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 99 69999999997 899999999999999999995 7999999999987
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=4.2e-42 Score=242.07 Aligned_cols=125 Identities=31% Similarity=0.617 Sum_probs=114.1
Q ss_pred hHHHHHHHHHHhhcC-CCCCeeeeecC-C--CcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccce
Q 048404 2 ASKRILKELKDLQKD-PPTSCSAGPVA-E--DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 77 (148)
Q Consensus 2 a~rRL~~E~~~l~~~-~~~~~~~~~~~-~--n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpn 77 (148)
+.+||++|+++++++ ++.++++.+.+ + |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||||
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 86 (138)
T 1jat_B 7 RNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPC 86 (138)
T ss_dssp HHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCC
Confidence 468999999999998 78999998864 3 5999999999999999999999999999999999999999999999999
Q ss_pred eeCC-Cce--eecCcccccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHH
Q 048404 78 INSN-GSI--CLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 127 (148)
Q Consensus 78 v~~~-G~i--cl~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~ 127 (148)
|+.+ |.| |++++. +|+|++++.+||.+|+++|.+|++++|+|++||++|
T Consensus 87 v~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 87 VNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp BCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred EeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 9975 999 999885 899999999999999999999999999999988654
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=9.3e-41 Score=242.32 Aligned_cols=123 Identities=32% Similarity=0.516 Sum_probs=114.8
Q ss_pred hHHHHHHHHHHhhcCCCCC-eeeeec-CCC--cceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccce
Q 048404 2 ASKRILKELKDLQKDPPTS-CSAGPV-AED--MFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 77 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~~~~-~~~~~~-~~n--~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpn 77 (148)
+.+||++|+++|+++++.| +.+.+. ++| +++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 5799999999999998888 677764 444 999999999999999999999999999999999999999999999999
Q ss_pred ee-CCCceeecCcc--cccCCCcCHHHHHHHHHHhhc-CCCCCCCccHHHH
Q 048404 78 IN-SNGSICLDILK--EQWSPALTISKVLLSICSLLT-DPNPDDPLVPEIA 124 (148)
Q Consensus 78 v~-~~G~icl~~l~--~~W~p~~~i~~il~~l~~~l~-~p~~~~~~n~ea~ 124 (148)
|+ .+|.||+++|. ++|+|+++|.+||.+|+++|. .||+++|+|.|||
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 99 79999999997 899999999999999999997 5999999999986
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.6e-40 Score=230.12 Aligned_cols=109 Identities=42% Similarity=0.809 Sum_probs=105.0
Q ss_pred HHHHHHHHHHhhcCCCCCeeee--ecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccc--ccee
Q 048404 3 SKRILKELKDLQKDPPTSCSAG--PVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF--HPNI 78 (148)
Q Consensus 3 ~rRL~~E~~~l~~~~~~~~~~~--~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~--Hpnv 78 (148)
.|||++|++++++++++|+++. +.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.+++| ||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 4999999999999999999965 88899999999999999999999999999999999999999999999999 9999
Q ss_pred eCCCceeecCcccccCCCcCHHHHHHHHHHhhc
Q 048404 79 NSNGSICLDILKEQWSPALTISKVLLSICSLLT 111 (148)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~i~~il~~l~~~l~ 111 (148)
+.+|.||+++|.++|+|++++++||.+|+++|.
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 999999999999999999999999999999974
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-38 Score=233.99 Aligned_cols=116 Identities=28% Similarity=0.677 Sum_probs=104.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeC
Q 048404 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (148)
Q Consensus 1 ~a~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~ 80 (148)
.|.+||++|+++|++++++|+.+.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.++ ||+|+.
T Consensus 14 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~ 91 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC 91 (187)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc
Confidence 378999999999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred CCceeecCc---ccccCCCcCHHHHHHHHHHhhcCCCCCCC
Q 048404 81 NGSICLDIL---KEQWSPALTISKVLLSICSLLTDPNPDDP 118 (148)
Q Consensus 81 ~G~icl~~l---~~~W~p~~~i~~il~~l~~~l~~p~~~~~ 118 (148)
+|.||+++| .++|+|+++|.+||.+|+++|.+|+++..
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 999999999 68999999999999999999999988754
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=2.6e-39 Score=237.80 Aligned_cols=137 Identities=24% Similarity=0.530 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHhhcCC---CCCeeeeecCCCcceEEEEEECC-CCCCCCC-----------CEEEEEEEeCCCCCCCCCe
Q 048404 2 ASKRILKELKDLQKDP---PTSCSAGPVAEDMFHWQATIMGP-PDSPYAG-----------GVFLVTIHFPPDYPFKPPK 66 (148)
Q Consensus 2 a~rRL~~E~~~l~~~~---~~~~~~~~~~~n~~~w~~~i~gp-~~t~y~g-----------~~f~~~i~fp~~yP~~pP~ 66 (148)
|.+||++|+++|++++ +.++.+.+.++|+++|+++|.|| ++|+|+| |.|+++|.||++||++||+
T Consensus 28 a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~ 107 (186)
T 1zuo_A 28 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPF 107 (186)
T ss_dssp HHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCe
Confidence 6899999999999987 68899999999999999999997 9999998 8999999999999999999
Q ss_pred eEEeeccccc-eeeCCCceeecCcc-cccCCCcCHHHHHHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHH
Q 048404 67 VAFRTKVFHP-NINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQK 144 (148)
Q Consensus 67 v~f~~~i~Hp-nv~~~G~icl~~l~-~~W~p~~~i~~il~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~ 144 (148)
|+|.+++||| ||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|+... .+..++.+|.++++.++.+
T Consensus 108 V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~~~~ 179 (186)
T 1zuo_A 108 VRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQSYN 179 (186)
T ss_dssp EEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHHHHH
T ss_pred EEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHHHHH
Confidence 9999999999 69999999999996 789999999999999999999986532 3344566777777777666
Q ss_pred hh
Q 048404 145 YA 146 (148)
Q Consensus 145 ~a 146 (148)
.+
T Consensus 180 ~~ 181 (186)
T 1zuo_A 180 SI 181 (186)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=9.3e-29 Score=176.11 Aligned_cols=96 Identities=18% Similarity=0.304 Sum_probs=89.6
Q ss_pred HHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCC----------EEEEEEEeCCCCCCCCCeeEEeec
Q 048404 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGG----------VFLVTIHFPPDYPFKPPKVAFRTK 72 (148)
Q Consensus 3 ~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~----------~f~~~i~fp~~yP~~pP~v~f~~~ 72 (148)
.+||++|+++|++ ++.+.++|++.|...+.||+||+|+|| .|.+++.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 7999999999999 577888999999999999999999999 999999999999999999999998
Q ss_pred -cccceeeCCCceeecCc-cc---ccCCCcCHHHHHH
Q 048404 73 -VFHPNINSNGSICLDIL-KE---QWSPALTISKVLL 104 (148)
Q Consensus 73 -i~Hpnv~~~G~icl~~l-~~---~W~p~~~i~~il~ 104 (148)
++|||||.+|+||++++ .. .|+|.++|.++|.
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 99999999999999999 43 4669999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.83 E-value=2.1e-20 Score=133.93 Aligned_cols=113 Identities=25% Similarity=0.411 Sum_probs=92.5
Q ss_pred HHHHHHHHHhhcC-C--CCCeeeeecCCCcceEEEEEECCCCCCCCCCE---EEEEEEeCCCCCCCCCeeEEeec-----
Q 048404 4 KRILKELKDLQKD-P--PTSCSAGPVAEDMFHWQATIMGPPDSPYAGGV---FLVTIHFPPDYPFKPPKVAFRTK----- 72 (148)
Q Consensus 4 rRL~~E~~~l~~~-~--~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~---f~~~i~fp~~yP~~pP~v~f~~~----- 72 (148)
+|..+|..++.+. + .+...+...++...++-+.+.|.-.++|+|+. |.+.|-||++||++||.|.|..+
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 5677788877663 2 12223345556777788888887779999999 88999999999999999988541
Q ss_pred -----cc-cceeeCCCceeecCcccccCC-CcCHHHHHHHHHHhhcCCCCCC
Q 048404 73 -----VF-HPNINSNGSICLDILKEQWSP-ALTISKVLLSICSLLTDPNPDD 117 (148)
Q Consensus 73 -----i~-Hpnv~~~G~icl~~l~~~W~p-~~~i~~il~~l~~~l~~p~~~~ 117 (148)
|+ ||||+.+|++|+++| .+|+| +.++.++|.+|.++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL-~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPIL-HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGG-GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccccccCCCCCCCCCCcEeCccc-ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 999999999999999 57999 5799999999999999999874
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.78 E-value=2.1e-20 Score=130.48 Aligned_cols=95 Identities=24% Similarity=0.420 Sum_probs=80.7
Q ss_pred HHHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCC----------EEEEEEEeCCCCCCCCCeeEEeec
Q 048404 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGG----------VFLVTIHFPPDYPFKPPKVAFRTK 72 (148)
Q Consensus 3 ~rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~----------~f~~~i~fp~~yP~~pP~v~f~~~ 72 (148)
..||..||..|-+ +++.++++-..|...+.|+.||+|.|+ .|.+++.||.+||.+||+|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 4799999999987 666677777899999999999999999 899999999999999999999995
Q ss_pred -cccceeeCCCceeecCc-cccc---CCCcCHHHHH
Q 048404 73 -VFHPNINSNGSICLDIL-KEQW---SPALTISKVL 103 (148)
Q Consensus 73 -i~Hpnv~~~G~icl~~l-~~~W---~p~~~i~~il 103 (148)
.+||++|.+|+||++++ ..-| .|.++|...|
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 89999999999999987 1223 3445665554
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.56 E-value=1.4e-14 Score=101.93 Aligned_cols=101 Identities=19% Similarity=0.390 Sum_probs=78.8
Q ss_pred HHHHHHHhhcC-CCCCeeee---ecCCCcceEEEEEECCCCCCCCCCEEE--EEEEeCCCCCCCCCeeEEeec------c
Q 048404 6 ILKELKDLQKD-PPTSCSAG---PVAEDMFHWQATIMGPPDSPYAGGVFL--VTIHFPPDYPFKPPKVAFRTK------V 73 (148)
Q Consensus 6 L~~E~~~l~~~-~~~~~~~~---~~~~n~~~w~~~i~gp~~t~y~g~~f~--~~i~fp~~yP~~pP~v~f~~~------i 73 (148)
..+|..++.+. +....... -...++..|.++|. .+|+|+.|. +.|-||++||++||.| |.++ .
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~ 99 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIK 99 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEEC
T ss_pred hHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEEC
Confidence 45666666553 22111111 23368999999997 579999988 5999999999999999 6655 4
Q ss_pred ccceeeCCCceeecCcccccCC-CcCHHHHHHHHHHhhcC
Q 048404 74 FHPNINSNGSICLDILKEQWSP-ALTISKVLLSICSLLTD 112 (148)
Q Consensus 74 ~Hpnv~~~G~icl~~l~~~W~p-~~~i~~il~~l~~~l~~ 112 (148)
.||||+.+|++|++.|.+ |++ ..++.+++..|++.|.+
T Consensus 100 ~~~~Vd~~G~i~lpyL~~-W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 100 TGKHVDANGKIYLPYLHE-WKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CBTTBCTTCBBCCHHHHT-CCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCEecccccc-cCCCCCCHHHHHHHHHHHHhh
Confidence 899999999999999954 987 78999999999999863
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.07 E-value=0.0071 Score=40.66 Aligned_cols=66 Identities=15% Similarity=0.194 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEee
Q 048404 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRT 71 (148)
Q Consensus 4 rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~ 71 (148)
.+...|+..|...-+..+.+ .++....+.+.+....+..-+.-.+.+.+.+|++||.+||.|...+
T Consensus 13 e~q~~EleaL~sIy~d~~~~--~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 13 EEQRNELEALESIYPDSFTV--LSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHCSSSEEE--CCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHccCceEE--ccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 45677888888754444443 2223455666665322222234578999999999999999998654
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.68 E-value=0.016 Score=38.82 Aligned_cols=68 Identities=13% Similarity=0.172 Sum_probs=41.7
Q ss_pred HHHHHHHHhhcCCCCCeeeeecCC--CcceEEEEEECCCCCCC--CCCEEEEEEEeCCCCCCCCCeeEEeec
Q 048404 5 RILKELKDLQKDPPTSCSAGPVAE--DMFHWQATIMGPPDSPY--AGGVFLVTIHFPPDYPFKPPKVAFRTK 72 (148)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~~--n~~~w~~~i~gp~~t~y--~g~~f~~~i~fp~~yP~~pP~v~f~~~ 72 (148)
+...|+..|+..-+..+.+..... +...+.+.+..+.+..- ..-.+.+.+.+|.+||..+|.|...+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 467788888875544454432211 23344444432222111 124788999999999999999987763
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.053 Score=36.75 Aligned_cols=66 Identities=12% Similarity=0.224 Sum_probs=41.3
Q ss_pred HHHHHHHHhhcCCCCCeeeeecC------CCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEee
Q 048404 5 RILKELKDLQKDPPTSCSAGPVA------EDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRT 71 (148)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~------~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~ 71 (148)
+-..|+..|...-+..+.+.... .....+.+.+....+ .-..-.+.+.+.+|.+||..+|.|.+.+
T Consensus 14 ~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 35667777777543333322110 124567777763222 1123578899999999999999998764
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.79 E-value=0.13 Score=37.12 Aligned_cols=85 Identities=15% Similarity=0.282 Sum_probs=60.9
Q ss_pred HHHHHHHHHhhcCCCCCeeeeecCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCCCc
Q 048404 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGS 83 (148)
Q Consensus 4 rRL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~G~ 83 (148)
++|.+|+.+|==+ .+.-.+.++....+.+.. =.|..+.++|.++.+||.++|.+...-|. |
T Consensus 4 ~~li~Ei~~iGW~-----~l~~id~~~~~i~l~~~D-----~~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~------- 64 (186)
T 3zqs_A 4 SSLIEEIGTLGWD-----KLVYADTCFSTIKLKAED-----ASGREHLITLKLKAKYPAESPDYFVDFPV--P------- 64 (186)
T ss_dssp CSHHHHHHHHCGG-----GEEEECTTSSEEEEEEEC-----TTSCEEEEEEECCTTTTTSCCEEECCCSS--C-------
T ss_pred HHHHHHHHHhCCc-----eeeeecCCccEEEEEEEe-----CCCCeEEEEEEECCCCCCCCCeeEEcCCC--C-------
Confidence 3677788876111 133345678888888873 24688999999999999999988655442 1
Q ss_pred eeecCcccccCCCcCHHHHHHHHHHhhcC
Q 048404 84 ICLDILKEQWSPALTISKVLLSICSLLTD 112 (148)
Q Consensus 84 icl~~l~~~W~p~~~i~~il~~l~~~l~~ 112 (148)
+.-.|++..++.+++.+.+..+..
T Consensus 65 -----~~~~w~~~ssL~~v~~qF~~~Le~ 88 (186)
T 3zqs_A 65 -----FCASWTPQSSLISIYSQFLAAIES 88 (186)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred -----cccccCCCccHHHHHHHHHHHHHH
Confidence 124799999999988877776643
No 60
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=95.60 E-value=0.24 Score=34.35 Aligned_cols=24 Identities=17% Similarity=0.376 Sum_probs=21.4
Q ss_pred EEEEEEEeCCCCCCCCCeeEEeec
Q 048404 49 VFLVTIHFPPDYPFKPPKVAFRTK 72 (148)
Q Consensus 49 ~f~~~i~fp~~yP~~pP~v~f~~~ 72 (148)
.+.++|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999986643
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.70 E-value=0.12 Score=34.46 Aligned_cols=65 Identities=15% Similarity=0.096 Sum_probs=39.9
Q ss_pred HHHHHHHHhhcCCCC--Ceeeee-cCCCcceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEe
Q 048404 5 RILKELKDLQKDPPT--SCSAGP-VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFR 70 (148)
Q Consensus 5 RL~~E~~~l~~~~~~--~~~~~~-~~~n~~~w~~~i~gp~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~ 70 (148)
+...|+..|...-+. .+.+.. ...+...+.+.+.. .+..-..-.+.+.+.+|.+||..+|.|...
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 356688777764221 333211 11234577777763 221112347899999999999999998754
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.68 E-value=0.2 Score=33.74 Aligned_cols=67 Identities=15% Similarity=0.162 Sum_probs=40.1
Q ss_pred HHHHHHHHHhhcCCCCCeeeeecCC-----CcceEEEEEECCCCC--CCCCCEEEEEEEeCCCCCCCCCeeEEee
Q 048404 4 KRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDS--PYAGGVFLVTIHFPPDYPFKPPKVAFRT 71 (148)
Q Consensus 4 rRL~~E~~~l~~~~~~~~~~~~~~~-----n~~~w~~~i~gp~~t--~y~g~~f~~~i~fp~~yP~~pP~v~f~~ 71 (148)
.+...|+..|...-+..+....... ......+.+. +.+. .-..-.+.+.+.||.+||..+|.|...+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 13 QRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 3456788888775444343321111 1345556664 2221 0112468999999999999999998753
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.02 E-value=0.18 Score=34.70 Aligned_cols=25 Identities=24% Similarity=0.515 Sum_probs=21.7
Q ss_pred CEEEEEEEeCCCCCCCCCeeEEeec
Q 048404 48 GVFLVTIHFPPDYPFKPPKVAFRTK 72 (148)
Q Consensus 48 ~~f~~~i~fp~~yP~~pP~v~f~~~ 72 (148)
-.+.+.+.+|.+||..||.|.....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987654
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=76.26 E-value=2 Score=20.01 Aligned_cols=19 Identities=37% Similarity=0.704 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhhcCCCCCe
Q 048404 3 SKRILKELKDLQKDPPTSC 21 (148)
Q Consensus 3 ~rRL~~E~~~l~~~~~~~~ 21 (148)
+.||+-|+..++.++++|.
T Consensus 7 ldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 7 LDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHhhhccCCCCCC
Confidence 5689999999999998874
No 65
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=74.76 E-value=0.61 Score=30.59 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=0.0
Q ss_pred CCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 114 NPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 114 ~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
....|.+.+.|+.|.++.+.|.+.++.|+.-+|+
T Consensus 22 ~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~ 55 (108)
T 2cwb_A 22 TTTEAVDAATAEKVFKQYANDNGVDGEWTYDDAT 55 (108)
T ss_dssp ----------------------------------
T ss_pred ccCCchhHHHHHHHHhchhccccccccccccCcC
Confidence 3557888999999999999999999999966653
No 66
>1zoq_C CREB-binding protein, interferon regulatory factor 3; transcription regulation, transferase, transcription/transferase complex; 2.37A {Homo sapiens} SCOP: a.153.1.1 PDB: 1jjs_A
Probab=39.34 E-value=15 Score=19.93 Aligned_cols=43 Identities=23% Similarity=0.356 Sum_probs=30.8
Q ss_pred HHHHHHhhcCCCCCCC-ccHHHHHHHhHCHHHHHHHHHHHHHHhhC
Q 048404 103 LLSICSLLTDPNPDDP-LVPEIAHMYKSDKAKYEATARSWTQKYAM 147 (148)
Q Consensus 103 l~~l~~~l~~p~~~~~-~n~ea~~~~~~~~~~f~~~~~~~~~~~a~ 147 (148)
|..|-.-+.+|. +| .+..+-.+.+.|+..-...++.-+.+|++
T Consensus 3 LqqLl~tlksp~--sp~qqqqvl~ILksnPqLMAAfIkQR~~~y~~ 46 (47)
T 1zoq_C 3 LQDLLRTLKSPS--SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 46 (47)
T ss_dssp HHHHHHTCCSCC--CHHHHHHHHHHHHTCHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHhcCCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcc
Confidence 334444455555 34 56677888999999999888888888775
No 67
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=31.91 E-value=44 Score=24.07 Aligned_cols=26 Identities=15% Similarity=0.360 Sum_probs=21.9
Q ss_pred CCCCEEEEEEEeCCCCCC-----CCCeeEEe
Q 048404 45 YAGGVFLVTIHFPPDYPF-----KPPKVAFR 70 (148)
Q Consensus 45 y~g~~f~~~i~fp~~yP~-----~pP~v~f~ 70 (148)
-+.|.|.|+-.+|..||. .||-|.|.
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 356889999999999998 78888765
No 68
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=31.03 E-value=50 Score=19.01 Aligned_cols=20 Identities=5% Similarity=0.145 Sum_probs=17.5
Q ss_pred ccHHHHHHHhHCHHHHHHHH
Q 048404 119 LVPEIAHMYKSDKAKYEATA 138 (148)
Q Consensus 119 ~n~ea~~~~~~~~~~f~~~~ 138 (148)
.|++.+.+..+|+++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 68889999999999998865
No 69
>1kbh_B CREB-binding protein, nuclear receptor coactivator; nuclear hormone receptors, ACTR, CBP, transcription; NMR {Mus musculus} SCOP: a.153.1.1 PDB: 2c52_A 2kkj_A 2l14_A
Probab=30.61 E-value=77 Score=17.97 Aligned_cols=45 Identities=20% Similarity=0.281 Sum_probs=32.1
Q ss_pred HHHHHHhhcCCCCCCCccHHHHHHHhHCHHHHHHHHHHHHHHhhCC
Q 048404 103 LLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 148 (148)
Q Consensus 103 l~~l~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~~a~~ 148 (148)
|..|-.-+.+|. ..-.+..+..+.+.|+..-...+|.-+.+|.++
T Consensus 10 LqqLl~tlksp~-speqqqqvl~ILksNPqLMAAfIKQR~~~~~~~ 54 (59)
T 1kbh_B 10 LQDLLRTLKSPS-SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVAN 54 (59)
T ss_dssp HHHHHHHHHSCT-TTTCSTHHHHHHTTSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCC-CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcc
Confidence 334444445554 223678889999999999998888888887763
No 70
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=28.76 E-value=50 Score=19.71 Aligned_cols=22 Identities=5% Similarity=0.123 Sum_probs=19.1
Q ss_pred CccHHHHHHHhHCHHHHHHHHH
Q 048404 118 PLVPEIAHMYKSDKAKYEATAR 139 (148)
Q Consensus 118 ~~n~ea~~~~~~~~~~f~~~~~ 139 (148)
..|++++++..+|+++|.+...
T Consensus 38 ~~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 38 RENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TTCHHHHHHHHTTHHHHHHHHH
T ss_pred hHCHHHHHHHHHCHHHHHHHHc
Confidence 3688999999999999998774
No 71
>3s7v_A Major capsid protein VP1; jelly-roll, antiparallel beta sandwich, major capsid protein protein; 2.55A {Ki polyomavirus} PDB: 3s7x_A
Probab=27.24 E-value=1.4e+02 Score=22.42 Aligned_cols=44 Identities=23% Similarity=0.417 Sum_probs=31.4
Q ss_pred CCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCCCc--eee
Q 048404 40 PPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (148)
Q Consensus 40 p~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~G~--icl 86 (148)
|+-+.=|..+|..++.=... .||.+.|....-.+..|++|. +|.
T Consensus 194 pDPskNENtRYFG~~tGG~~---TPPVl~ftNt~TTvLLDENGVGpLCk 239 (277)
T 3s7v_A 194 PDPSRNDNCRYFGRVVGGAA---TPPVVSYGNNSTIPLLDENGIGILCL 239 (277)
T ss_dssp ECTTSCCSEEEEEEEECCSS---CCCEEEEESSCCEECCCTTSCCEECT
T ss_pred CCCCcCcCceeeEEecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 34444555666666665544 799999999888899998765 775
No 72
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=24.02 E-value=1.5e+02 Score=20.56 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=27.4
Q ss_pred cceEEEEEECCCCC-------------CCCCCEEEEEEEeCCCCCCCCCe
Q 048404 30 MFHWQATIMGPPDS-------------PYAGGVFLVTIHFPPDYPFKPPK 66 (148)
Q Consensus 30 ~~~w~~~i~gp~~t-------------~y~g~~f~~~i~fp~~yP~~pP~ 66 (148)
-.+|.++..|..++ |..-|.++|.+.-+.--|..-|.
T Consensus 37 dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 37 DLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp CEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 34888888874443 66788899998887777777666
No 73
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=23.23 E-value=20 Score=16.53 Aligned_cols=16 Identities=31% Similarity=0.785 Sum_probs=8.9
Q ss_pred CCCCCeeEEeeccccc
Q 048404 61 PFKPPKVAFRTKVFHP 76 (148)
Q Consensus 61 P~~pP~v~f~~~i~Hp 76 (148)
|...|+-.|....|||
T Consensus 4 pmtlpenyfserpyhp 19 (26)
T 2jrw_A 4 PMTLPENYFSERPYHP 19 (26)
T ss_dssp CCCCSSSSCCSSSCCS
T ss_pred ccccchhhcccCCCCC
Confidence 3444555566556665
No 74
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=21.88 E-value=60 Score=16.96 Aligned_cols=12 Identities=42% Similarity=0.603 Sum_probs=10.1
Q ss_pred HHHHHHHHHHhh
Q 048404 3 SKRILKELKDLQ 14 (148)
Q Consensus 3 ~rRL~~E~~~l~ 14 (148)
.+|+.+|++++.
T Consensus 30 ~~~~~~~~~~~~ 41 (42)
T 3g9r_A 30 IKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 589999999875
No 75
>1sid_A Polyomavirus coat protein VP1; icosahedral virus; HET: SIA GAL BGC; 3.65A {Mouse polyomavirus} SCOP: b.121.6.1 PDB: 1sie_A*
Probab=21.51 E-value=1.7e+02 Score=22.87 Aligned_cols=39 Identities=15% Similarity=0.313 Sum_probs=26.1
Q ss_pred CCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCCCc--eee
Q 048404 45 YAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (148)
Q Consensus 45 y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~G~--icl 86 (148)
=|..+|..++.=... .||.+.|....-.+..|+||. +|.
T Consensus 234 NENtRYFG~~tGG~~---TPPVlqftNt~TTvLLDENGVGpLCk 274 (383)
T 1sid_A 234 NENTRYFGNYTGGTT---TPPVLQFTNTLTTVLLDENGVGPLCK 274 (383)
T ss_dssp SCSEEEEEEEECCSS---CCCEEEEESSCEEECCCTTSCCCBCS
T ss_pred CcCceeeEEecCCCC---CCCeEEeccceeEEEEcCCCcccccc
Confidence 344444444444333 699999998888888998765 554
No 76
>1vps_A Polyomavirus VP1 pentamer; virus coat protein, oligosaccharide binding, virus assembly, acid, viral protein; HET: SIA GAL NAG; 1.90A {Murine polyomavirus} SCOP: b.121.6.1 PDB: 1vpn_A* 1cn3_A
Probab=21.44 E-value=2.2e+02 Score=21.46 Aligned_cols=44 Identities=16% Similarity=0.328 Sum_probs=30.7
Q ss_pred CCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceeeCCCc--eee
Q 048404 40 PPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (148)
Q Consensus 40 p~~t~y~g~~f~~~i~fp~~yP~~pP~v~f~~~i~Hpnv~~~G~--icl 86 (148)
|+-+.=|..+|..++.=... .||.+.|....-.+..+++|. +|.
T Consensus 198 PDPskNENtRYFG~~tGG~~---TPpvl~ftNt~TtvLldEnGvGpLCk 243 (289)
T 1vps_A 198 PDPAKNENTRYFGNYTGGTT---TPPVLQFTNTLTTVLLDENGVGPLCK 243 (289)
T ss_dssp ECTTSCTTEEEEEEEECCSS---CCCEEEEESSCCEECCCTTSCCCEES
T ss_pred CCCCcCcCceeeeeecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 34444555566666655444 799999998888889998755 775
No 77
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=21.28 E-value=1.1e+02 Score=21.71 Aligned_cols=54 Identities=20% Similarity=0.259 Sum_probs=34.3
Q ss_pred CEEEEEEEeCCCCCCCCCeeEEeecc--ccceeeCCCceeecCcccccCCCcCHHHHHHHH
Q 048404 48 GVFLVTIHFPPDYPFKPPKVAFRTKV--FHPNINSNGSICLDILKEQWSPALTISKVLLSI 106 (148)
Q Consensus 48 ~~f~~~i~fp~~yP~~pP~v~f~~~i--~Hpnv~~~G~icl~~l~~~W~p~~~i~~il~~l 106 (148)
....+.|.+....|...|.++|..+- .+|.= -+++--...|.+..++.+=|..|
T Consensus 124 ~~vsl~i~vdP~~P~~lPe~~FlG~~~~v~~lr-----~~~~~nl~~Wd~~~~i~~NL~~i 179 (186)
T 3zqs_A 124 NNVSINIEVDPRHPTMLPECFFLGADHVVKPLG-----IKLSRNIHLWDPENSVLQNLKDV 179 (186)
T ss_dssp TTEEEEEECCTTSTTSCCEEEEEECHHHHHHHH-----HHHHHHGGGCCTTSCHHHHHHHH
T ss_pred CCcEEEEEECCCCCCcCCceEEECChHHHHHHH-----HHHhhhHhhcCCCCCHHHHHHHH
Confidence 44578888999999999999998651 11110 01110115799999876655544
No 78
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=20.50 E-value=1.1e+02 Score=25.36 Aligned_cols=26 Identities=15% Similarity=0.139 Sum_probs=22.2
Q ss_pred HHHHHHHhHCHHHHHHHHHHHHHHhh
Q 048404 121 PEIAHMYKSDKAKYEATARSWTQKYA 146 (148)
Q Consensus 121 ~ea~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
.|+.++..+|+++|.+.+++..+++.
T Consensus 278 ee~~~l~~~dp~~~~~~~~~Sm~rhv 303 (552)
T 2fkn_A 278 DEADRLRQDTPELYVRLAKQSMKKHV 303 (552)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 47777889999999999999988764
No 79
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=20.43 E-value=51 Score=15.60 Aligned_cols=12 Identities=25% Similarity=0.617 Sum_probs=7.7
Q ss_pred HHHHHHHHHhhc
Q 048404 4 KRILKELKDLQK 15 (148)
Q Consensus 4 rRL~~E~~~l~~ 15 (148)
|++++||-.|+.
T Consensus 13 R~lLkeyY~L~~ 24 (26)
T 2c5k_P 13 RLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhhhc
Confidence 558888887765
No 80
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=20.35 E-value=1.1e+02 Score=19.78 Aligned_cols=27 Identities=15% Similarity=0.224 Sum_probs=23.4
Q ss_pred eEEEEEECCCCCCCCCCEEEEEEEeCC
Q 048404 32 HWQATIMGPPDSPYAGGVFLVTIHFPP 58 (148)
Q Consensus 32 ~w~~~i~gp~~t~y~g~~f~~~i~fp~ 58 (148)
-+|+.+.|.+..+=+|..+.++|.|-+
T Consensus 81 G~HvML~gl~~~l~~G~~v~ltL~Fe~ 107 (120)
T 2k6w_A 81 GYHFMLLGLKRPLKAGEEVELDLLFAG 107 (120)
T ss_dssp TEEEEEEEESSCBCTTCEEEEEEEETT
T ss_pred ceEEEEeCCCCCCCCCCEEEEEEEECC
Confidence 378999998888889999999999964
No 81
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=20.31 E-value=1.1e+02 Score=25.32 Aligned_cols=26 Identities=23% Similarity=0.213 Sum_probs=22.2
Q ss_pred HHHHHHHhHCHHHHHHHHHHHHHHhh
Q 048404 121 PEIAHMYKSDKAKYEATARSWTQKYA 146 (148)
Q Consensus 121 ~ea~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
.|+.++..+|+++|.+.+++..+++.
T Consensus 277 ee~~~l~~~dp~~~~~~~~~Sm~rhv 302 (551)
T 1x87_A 277 DEAAELRARDPKQYIARAKQSIAAHV 302 (551)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 47777889999999999999988764
No 82
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=20.28 E-value=1.5e+02 Score=18.56 Aligned_cols=23 Identities=26% Similarity=0.368 Sum_probs=18.8
Q ss_pred CCEEEEEEEeCCCCCCCCCeeEEe
Q 048404 47 GGVFLVTIHFPPDYPFKPPKVAFR 70 (148)
Q Consensus 47 g~~f~~~i~fp~~yP~~pP~v~f~ 70 (148)
+..+...|.|+..|+. +|+|.+.
T Consensus 28 ~R~~~~~V~F~~~F~~-~P~V~v~ 50 (101)
T 2ccv_A 28 TRELAKNITFASPYCR-PPVVLLS 50 (101)
T ss_dssp CEEEEEEEECSSCCSS-CCEEEEE
T ss_pred ceEEEEEeEeCcccCC-CCEEEEE
Confidence 3458888999999996 8999875
No 83
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=20.06 E-value=1.1e+02 Score=25.31 Aligned_cols=26 Identities=8% Similarity=-0.022 Sum_probs=22.2
Q ss_pred HHHHHHHhHCHHHHHHHHHHHHHHhh
Q 048404 121 PEIAHMYKSDKAKYEATARSWTQKYA 146 (148)
Q Consensus 121 ~ea~~~~~~~~~~f~~~~~~~~~~~a 146 (148)
.|+.++..+|+++|.+.+++..+++.
T Consensus 282 ee~~~l~~~dp~~~~~~~~~Sm~rhv 307 (557)
T 1uwk_A 282 EQYRDRAQTEPAAVVKAAKQSMAVHV 307 (557)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 47777889999999999999988764
Done!