BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048406
(114 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 4/93 (4%)
Query: 7 ADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMG 66
ADID + TI Y EFI AT+ +KLER E L AF +FDKD +GYIT+DE++ A K + +
Sbjct: 55 ADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL- 113
Query: 67 DDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
DD+ I +++ E+D+D DG+I Y EF AMM+
Sbjct: 114 DDIHI---DDMIKEIDQDNDGQIDYGEFAAMMR 143
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 26 QRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDK 85
+R E L + F+ D DN+G IT DEL+ K +G ++ + K++M D DK
Sbjct: 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK--RVGSELMESEIKDLMDAADIDK 59
Query: 86 DGRISYDEFRA 96
G I Y EF A
Sbjct: 60 SGTIDYGEFIA 70
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 84.3 bits (207), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 4/96 (4%)
Query: 7 ADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMG 66
AD+D + TI Y EFI AT+ +K+ER + L+ AF +FDKD +GYIT DEL+ A + + +
Sbjct: 72 ADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGV- 130
Query: 67 DDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGT 102
+DV I +E+ +VD+D DGRI Y+EF A + G+
Sbjct: 131 EDVRI---EELXRDVDQDNDGRIDYNEFVAXXQKGS 163
Score = 28.9 bits (63), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFK--GYNMGDDVTIAMKKEIMSEVDRDKDGR 88
E L + F D D +G IT +EL+ K G N+ + + ++ D D G
Sbjct: 24 EEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEIL----DLXQAADVDNSGT 79
Query: 89 ISYDEFRA 96
I Y EF A
Sbjct: 80 IDYKEFIA 87
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 71 IAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
IA KE + +D DK G+I+++E +A +K
Sbjct: 26 IAGLKEXFNXIDADKSGQITFEELKAGLK 54
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 7 ADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMG 66
D D N I Y EF+T M R L ERL +AF+ FD DN+G I+ EL T F G +
Sbjct: 415 VDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF-GVS-- 471
Query: 67 DDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
DV K ++SEVD++ DG + +DEF+ M+
Sbjct: 472 -DVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 7 ADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMG 66
D D N I Y EF+T M R L ERL +AF+ FD DN+G I+ EL T F G +
Sbjct: 414 VDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF-GVS-- 470
Query: 67 DDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
DV K ++SEVD++ DG + +DEF+ M+
Sbjct: 471 -DVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 7 ADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMG 66
D D N I Y EF+T M R L ERL +AF+ FD DN+G I+ EL T F G +
Sbjct: 391 VDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF-GVS-- 447
Query: 67 DDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
DV K ++SEVD++ DG + +DEF+ M+
Sbjct: 448 -DVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGD 67
D D N I Y EF+T R L ERL +AF+ FD DN+G I+ EL T F
Sbjct: 392 DFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFG----VS 447
Query: 68 DVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
DV K ++SEVD++ DG + +DEF+ +
Sbjct: 448 DVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 7 ADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMG 66
AD D N I Y EF+T M R L ++L AFQ FD+D G I+VDEL + F G
Sbjct: 116 ADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF-GL--- 171
Query: 67 DDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGTHLQANN 108
D + KE++S +D + DG + ++EF M++ L +NN
Sbjct: 172 DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ---KLCSNN 210
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYN--MGDDVTIAMKKEIMSEVDR----- 83
E + L F+H DK+ G + EL GY+ G++V + +I SEVD
Sbjct: 60 EETKELTDIFRHIDKNGDGQLDRQEL---IDGYSKLSGEEVAVFDLPQIESEVDAILGAA 116
Query: 84 --DKDGRISYDEF 94
D++G I Y EF
Sbjct: 117 DFDRNGYIDYSEF 129
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 7 ADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMG 66
AD D N I Y EF+T M R L ++L AFQ FD+D G I+VDEL + F G
Sbjct: 399 ADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF-GL--- 454
Query: 67 DDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGTHLQANN 108
D + KE++S +D + DG + ++EF M++ L +NN
Sbjct: 455 DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK---LCSNN 493
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MLTKTEADIDGNRTIVYIEFITATMQRHKLERFERLYKA---------------FQHFDK 45
M +K E+ I+ IE + KL + LY A F+H DK
Sbjct: 298 MCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDK 357
Query: 46 DNTGYITVDELETAFKGYN--MGDDVTIAMKKEIMSEVDR-------DKDGRISYDEF 94
+ G + EL GY+ G++V + +I SEVD D++G I Y EF
Sbjct: 358 NGDGQLDRQEL---IDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEF 412
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 7 ADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMG 66
D D N I Y EF+T M + L ERL AFQ FD D +G IT +EL F G
Sbjct: 96 VDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF-GVTEV 154
Query: 67 DDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
DD T +++ E D++ DG + ++EF MM+
Sbjct: 155 DDETW---HQVLQECDKNNDGEVDFEEFVEMMQ 184
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNM 65
E D DGN TI + EF+T M R + E + +AF+ FDKD G+I+ EL N+
Sbjct: 54 EVDADGNGTIDFPEFLT-MMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVM--TNL 110
Query: 66 GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ +T E++ E D D DG+++Y+EF MM S
Sbjct: 111 GEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 145
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 355 EVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 412
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 413 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 365
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 366 FPEFLTMM 373
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN D +T IA KE S D+D DG I+ E +M+S
Sbjct: 299 YNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 339
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 356 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 413
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 414 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 309 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 366
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 367 FPEFLTMM 374
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN D +T IA KE S D+D DG I+ E +M+S
Sbjct: 300 YNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 340
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 321 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 378
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 379 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 274 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 331
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 332 FPEFLTMM 339
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN D +T IA KE S D+D DG I+ E +M+S
Sbjct: 265 YNSRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 305
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 355 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 412
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 413 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 365
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 366 FPEFLTMM 373
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN D +T IA KE S D+D DG I+ E +M+S
Sbjct: 299 YNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 339
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 355 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 412
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 413 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 365
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 366 FPEFLTMM 373
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN D +T IA KE S D+D DG I+ E +M+S
Sbjct: 299 YNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 339
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 318 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 375
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 376 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 271 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 328
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 329 FPEFLTMM 336
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN D +T IA KE S D+D DG I+ E +M+S
Sbjct: 262 YNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 302
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 321 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 378
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 379 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 274 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 331
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 332 FPEFLTMM 339
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN D +T IA KE S D+D DG I+ E +M+S
Sbjct: 265 YNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 305
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGD 67
D+DG+ +I Y EFI + + R L ER+ +AF+ FDKD +G I+ EL FK ++ D
Sbjct: 391 DMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKEL---FKLFSQAD 447
Query: 68 DVTIAMK--KEIMSEVDRDKDGRISYDEFRAMMK 99
+I M+ + I+ +VD +KDG + ++EF M++
Sbjct: 448 S-SIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNM 65
E D DGN TI + EF+T ++ K E + +AF+ FDKD GYI+ EL N+
Sbjct: 50 EVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMT--NL 107
Query: 66 GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ +T E++ E + D DG+++Y+EF MM +
Sbjct: 108 GEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTA 142
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 60
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 61 FPEFLTMM 68
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGD 67
D D N I Y EF+T M + L ERL AFQ FD D +G IT +EL F G D
Sbjct: 371 DFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF-GVTEVD 429
Query: 68 DVTIAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
D T +++ E D++ DG + ++EF MM+
Sbjct: 430 DETW---HQVLQECDKNNDGEVDFEEFVEMMQ 458
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVDELETAFKGYNM--GDDVTIAMKKEIMSEVDR---- 83
LE + L + F+ D + G + EL ++ GD V+ +I +EVD
Sbjct: 310 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQS 369
Query: 84 ---DKDGRISYDEF 94
D++G I Y EF
Sbjct: 370 VDFDRNGYIEYSEF 383
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 5 TEADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGY 63
+E D DGN TI + EF++ ++ K + E L +AF+ FDKD GYI+ EL
Sbjct: 53 SEVDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVM--I 110
Query: 64 NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
N+G+ +T ++++ E D D DG+++Y+EF MM
Sbjct: 111 NLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 145
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAM 97
+AF FDKD G ITV+EL T + + + T ++++SEVD D +G I +DEF ++
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQ--NPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 98 M 98
M
Sbjct: 72 M 72
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 58 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 115
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 116 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 151
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 11 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 68
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 69 FPEFLTMM 76
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 52 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 109
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 110 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 62
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 63 FPEFLTMM 70
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 113 LGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 112 LGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 60 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 117
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 118 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 153
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 13 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 70
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 71 FPEFLTMM 78
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 112 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 52 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 109
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 110 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 62
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 63 FPEFLTMM 70
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD G+I+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM--TN 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM S
Sbjct: 112 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 147
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 51 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 108
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 109 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 144
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 4 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 61
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 62 FPEFLTMM 69
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 50 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 107
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 108 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 143
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 60
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 61 FPEFLTMM 68
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 112 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 56 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 113
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 114 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 149
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 9 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 66
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 67 FPEFLTMM 74
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD G+I+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM--TN 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM S
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM--TN 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 52 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 109
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
+G+ +T E++ E D D DG+++Y+EF MM
Sbjct: 110 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 62
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 63 FPEFLTMM 70
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 53 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 110
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
+G+ +T E++ E D D DG+++Y+EF MM
Sbjct: 111 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 144
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 6 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 63
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 64 FPEFLTMM 71
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T + K + E + +AF+ FDKD GYI+ EL N
Sbjct: 355 EVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 412
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 413 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 365
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 366 FPEFLTMM 373
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN D +T IA KE S D+D DG I+ E +M+S
Sbjct: 299 YNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 339
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD G+I+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM--TN 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM S
Sbjct: 113 LGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMTS 148
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DG+ TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 354 EVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 411
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 412 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D DG I
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGDGTID 364
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 365 FPEFLTMM 372
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN+ D +T IA KE S D+D DG I+ E +M+S
Sbjct: 298 YNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 338
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DG+ TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 354 EVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 411
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 412 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D DG I
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGDGTID 364
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 365 FPEFLTMM 372
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN+ D +T IA KE S D+D DG I+ E +M+S
Sbjct: 298 YNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 338
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DG+ TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 355 EVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 412
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 413 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D DG I
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGDGTID 365
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 366 FPEFLTMM 373
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN D +T IA KE S D+D DG I+ E +M+S
Sbjct: 299 YNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 339
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DG+ TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 354 EVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 411
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 412 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D DG I
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGDGTID 364
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 365 FPEFLTMM 372
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 63 YNMGDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
YN D +T IA KE S D+D DG I+ E +M+S
Sbjct: 298 YNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 338
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD G+I+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM--TN 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 112 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTA 147
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T +++ E D D DG+++Y+EF MM +
Sbjct: 113 LGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMMTA 148
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD G+I+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--N 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTT 148
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+ ++ K + E L +AF+ FDKD G+I+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM--TN 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
+G+ +T E++ E D D DG+I+YDEF +M
Sbjct: 113 LGEKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAM 97
+AF FDKD G IT EL T + ++G + T A +++++EVD D +G I + EF +
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 72
Query: 98 M 98
M
Sbjct: 73 M 73
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E + D DG+++Y+EF MM +
Sbjct: 112 LGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTA 147
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNM 65
E D D N I Y EFI+ M + L ERL +AF FD D +G IT +EL F ++
Sbjct: 407 EVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSI 466
Query: 66 GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
+ +++ E D++KD I +DEF +MM
Sbjct: 467 SEKTW----NDVLGEADQNKDNMIDFDEFVSMM 495
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN--------MGDDVTIAMKKE-IMSE 80
LE + L F+ DK+ G + EL +GYN +G+ + + + I+ E
Sbjct: 351 LEERKELTDIFKKLDKNGDGQLDKKEL---IEGYNVLRNFKNELGELKNVEEEVDNILKE 407
Query: 81 VDRDKDGRISYDEFRAMM 98
VD DK+G I Y EF ++
Sbjct: 408 VDFDKNGYIEYSEFISVC 425
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DG+ TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 54 EVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 112 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D DG I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGDGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+ ++ K + E+L +AF+ FDKD G+I+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVM--TN 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
+G+ +T E++ E D D DG+++Y+EF +M
Sbjct: 112 LGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF +M
Sbjct: 65 FPEFLNLM 72
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNM 65
+ D DG+ I Y EF+ A + R +L + + +Y AF+ FD DN G IT EL N
Sbjct: 98 QIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVDNDGEITTAELAHVLFNGNK 156
Query: 66 GDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
++T + K+++ EVD++ DG+I + EF MMK
Sbjct: 157 RGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFK--GYNMGDDVTIAMKKEIMSEVDRDKDGRISY 91
++L AF H D++ G IT +L + G + + + ++ ++D D G I Y
Sbjct: 55 QKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL-----LLDQIDSDGSGNIDY 109
Query: 92 DEFRA 96
EF A
Sbjct: 110 TEFLA 114
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DG+ TI + EF+ ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 346 EVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--N 403
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG+++Y+EF MM +
Sbjct: 404 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D DG I
Sbjct: 299 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGDGTID 356
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 357 FPEFLIMM 364
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNM 65
+ D DG+ I Y EFI A + R +L + + +Y AF+ FD DN G IT EL N
Sbjct: 95 QIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDNDGEITTAELAHILYNGNK 153
Query: 66 GDDVT---IAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
++T + K ++ +VD++ DG+I + EF MMK
Sbjct: 154 KGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E+L F D+D GYIT ++L+ + + + ++ ++D D G+I Y E
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL---LLDQIDSDGSGKIDYTE 108
Query: 94 FRA 96
F A
Sbjct: 109 FIA 111
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+ ++ K + E L +AF+ FDKD G+I+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM--TN 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
+G+ +T E++ E D D DG+I+Y+EF +M
Sbjct: 113 LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAM 97
+AF FDKD G IT EL T + ++G + T A +++++EVD D +G I + EF +
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 72
Query: 98 M 98
M
Sbjct: 73 M 73
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+ ++ K + E L +AF+ FDKD G+I+ EL N
Sbjct: 51 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM--TN 108
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
+G+ +T E++ E D D DG+++Y+EF +M
Sbjct: 109 LGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 142
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 4 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 61
Query: 91 YDEFRAMM 98
+ EF +M
Sbjct: 62 FPEFLNLM 69
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVX--TN 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
+G+ +T E + E D D DG+++Y+EF
Sbjct: 112 LGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A ++ ++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVXR--SLGQNPTEAELQDXINEVDADGNGTID 64
Query: 91 YDEF 94
+ EF
Sbjct: 65 FPEF 68
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+ ++ K + E L +AF+ FDKD G+I+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM--TN 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
+G+ +T E++ E D D DG+++Y+EF +M
Sbjct: 112 LGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF +M
Sbjct: 65 FPEFLNLM 72
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF++ ++ K + E L +AF+ FD+D G I+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM--TN 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG I+Y+EF MM S
Sbjct: 112 LGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFALFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF ++M
Sbjct: 65 FPEFLSLM 72
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF++ ++ K + E L +AF+ FD+D G I+ EL N
Sbjct: 54 EVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM--TN 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D D DG I+Y+EF MM S
Sbjct: 112 LGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFALFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF ++M
Sbjct: 65 FPEFLSLM 72
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T + K + E + +AF+ FDKD GYI+ EL N
Sbjct: 54 EVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXT--N 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
+G+ +T E + E D D DG+++Y+EF
Sbjct: 112 LGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A ++ ++EVD D +G I+
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVXR--SLGCNPTEAELQDXINEVDADGNGTIN 64
Query: 91 YDEF 94
+ EF
Sbjct: 65 FPEF 68
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL N
Sbjct: 55 EVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVX--TN 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
+G+ +T + + E D D DG+++Y+EF
Sbjct: 113 LGEKLTDEEVDQXIREADIDGDGQVNYEEF 142
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A ++ ++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVXR--SLGQNPTEAELQDXINEVDADGNGTID 65
Query: 91 YDEF 94
+ EF
Sbjct: 66 FPEF 69
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 5 TEADIDGNRTIVYIEFITA-TMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGY 63
+E D DG+ TI + EF+T T + + + E + KAF+ FD DN+G IT+ +L K
Sbjct: 71 SEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAK-- 128
Query: 64 NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
+G+++T +E+++E DR+ D I DEF +MK
Sbjct: 129 ELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 164
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ + + +AF FD D +G I EL+ A + +G + K+++SE+D+D G I
Sbjct: 25 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRA--LGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 91 YDEFRAMM 98
++EF MM
Sbjct: 83 FEEFLTMM 90
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLE----RFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ TI + EF+ +++ K + E L + F+ FD++ GYI +EL F+
Sbjct: 61 EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFR 120
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ VT + +M + D++ DGRI +DEF MM+
Sbjct: 121 AS--GEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 157
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
AF FD D G I+V EL T + +G T I+ EVD D G I ++EF MM
Sbjct: 22 AFDMFDADGGGDISVKELGTVMR--MLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E DGN TI + +F+T ++ K + E + +AF+ F KD GYI+ +L N
Sbjct: 355 EVGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMT--N 412
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ +T E++ E D DG+++Y++F MM +
Sbjct: 413 LGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMMTA 448
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT +L T + ++G + T A +++++EV D +G I
Sbjct: 308 EQIAEFKEAFSLFDKDGDGGITTKQLGTVMR--SLGQNPTEAELQDMINEVGADGNGTID 365
Query: 91 YDEFRAMM 98
+ +F MM
Sbjct: 366 FPQFLTMM 373
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 33 FERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYD 92
E L AF+ FD+D G+ITVDEL A G +G + ++ E D D+DGR++Y+
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAG--LGQPLPQEELDAMIREADVDQDGRVNYE 62
Query: 93 EFRAMM 98
EF M+
Sbjct: 63 EFARML 68
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQR----HKLERFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ T+ + EF+ ++ K + E L F+ +DK+ GYI +DEL+ +
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQ 122
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ +T +E+M + D++ DGRI YDEF MK
Sbjct: 123 AT--GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GSISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQR----HKLERFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ T+ + EF+ ++ K + E L F+ FDK+ GYI +DEL+ +
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQ 122
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ +T +E+M + D++ DGRI YDE+ MK
Sbjct: 123 AT--GETITEDDIEELMKDGDKNNDGRIDYDEWLEFMKG 159
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GSISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQR----HKLERFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ T+ + EF+ ++ K + E L F+ FDK+ GYI ++EL+ +
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQ 122
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ +T +E+M + D++ DGRI YDEF MK
Sbjct: 123 AT--GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GSISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLE----RFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ TI + EF+ +++ K + E L + F+ FD++ GYI +EL F+
Sbjct: 61 EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFR 120
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ VT + +M + D++ DGRI +DEF MM+
Sbjct: 121 AS--GEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 157
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
AF FD D G I+V EL T + +G T I+ EVD D G I ++EF MM
Sbjct: 22 AFDMFDADGGGDISVKELGTVMR--MLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQR----HKLERFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ T+ + EF+ ++ K + E L F+ FDK+ GYI ++EL+ +
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQ 122
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ +T +E+M + D++ DGRI YDEF MK
Sbjct: 123 AT--GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GSISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLE----RFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ TI + EF+ +++ K + E L F+ FDK+ G+I ++EL +
Sbjct: 61 EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR 120
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ VT +++M + D++ DGRI +DEF MM+
Sbjct: 121 AT--GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 157
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
AF FD D G I+ EL T + +G + T I+ EVD D G I ++EF MM
Sbjct: 22 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLE----RFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ TI + EF+ +++ K + E L F+ FDK+ G+I ++EL +
Sbjct: 64 EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR 123
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ VT +++M + D++ DGRI +DEF MM+
Sbjct: 124 AT--GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
AF FD D G I+ EL T + +G + T I+ EVD D G I ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++MSE+DRD +G +
Sbjct: 7 EQVTEFKEAFSLFDKDGDGCITTRELGTVMR--SLGQNPTEAELRDMMSEIDRDGNGTVD 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLGMM 72
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 5 TEADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDELETAFKGY 63
+E D DGN T+ + EF+ ++ K + E + +AF+ FDKD G+++ EL
Sbjct: 53 SEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVM--T 110
Query: 64 NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
+G+ ++ E++ D D DG+++Y+EF ++ S
Sbjct: 111 RLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVS 147
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLER----FERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ T+ + EF+ ++ K + E L F+ FDK+ GYI ++EL+ +
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQ 122
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ +T +E+M + D++ DGRI YDEF MK
Sbjct: 123 AT--GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GCISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E L +AF+ FDKD GYI+ EL N+G+ +T ++++ E D D DG+++Y+E
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 94 FRAMM 98
F MM
Sbjct: 62 FVKMM 66
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E L +AF+ FDKD GYI+ EL N+G+ +T ++++ E D D DG+++Y+E
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 94 FRAMM 98
F MM
Sbjct: 67 FVKMM 71
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLE----RFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ TI + EF+ +++ K + E L F+ FDK+ G+I ++EL +
Sbjct: 64 EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILR 123
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ VT +++M + D++ DGRI +DEF MM+
Sbjct: 124 AT--GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
AF FD D G I+ EL T + +G + T I+ EVD D G I ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLE----RFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ TI + EF+ +++ K + E L F+ FDK+ G+I ++EL +
Sbjct: 64 EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILR 123
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ VT +++M + D++ DGRI +DEF MM+
Sbjct: 124 AT--GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
AF FD D G I+ EL T + +G + T I+ EVD D G I ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQR----HKLERFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ T+ + EF+ ++ K + E L F+ DK+ GYI +DEL+ +
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQ 122
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ +T +E+M + D++ DGRI YDEF MK
Sbjct: 123 AT--GETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GSISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQR----HKLERFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ T+ + EF+ ++ K + E L F+ FDK+ GYI +DEL+ +
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQ 122
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ +T +E+M + D++ DGRI YDE MK
Sbjct: 123 AT--GETITEDDIEELMKDGDKNNDGRIDYDEXLEFMKG 159
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GSISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 8 DIDGNRT--IVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNM 65
DID N + I Y +F+ AT+ + + E F+ FD D G I+V+EL+ F ++
Sbjct: 101 DIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDI 160
Query: 66 GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
+ + ++ EVD + DG I + EF MM
Sbjct: 161 ENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 5 TEADIDGNRTIVYIEFITATMQR-HKLERFERLYKAFQHFDKDNTGYITVDELETAFKGY 63
+E D +G + + +F+T Q+ + + E + KAF+ FD D TG I+ L+ K
Sbjct: 49 SEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAK-- 106
Query: 64 NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
+G+++T +E++ E DRD DG +S EF +MK
Sbjct: 107 ELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ + + +AF FD D TG I V EL+ A + +G + K+++SE+D++ G+++
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRA--LGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 91 YDEFRAMM 98
+ +F +M
Sbjct: 61 FGDFLTVM 68
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 8 DIDGNRTIVYIEFITA-TMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMG 66
D DG+ TI + EF+ T + + + E + KAF+ FD D TG I+ L+ K +G
Sbjct: 54 DKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAK--ELG 111
Query: 67 DDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
+++T +E++ E DRD DG ++ +EF +MK
Sbjct: 112 ENMTDEELQEMIDEADRDGDGEVNEEEFFRIMK 144
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ + + +AF FD D +G I EL+ A + +G + K++++++D+D G I
Sbjct: 5 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRA--LGFEPKKEEIKKMIADIDKDGSGTID 62
Query: 91 YDEFRAMM 98
++EF MM
Sbjct: 63 FEEFLQMM 70
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLE----RFERLYKAFQHFDKDNTGYITVDELETAFK 61
E D DG+ TI + EF+ +++ K + E L F+ FDK+ G+I ++EL +
Sbjct: 64 EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILR 123
Query: 62 GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKS 100
G+ V +++M + D++ DGRI +DEF MM+
Sbjct: 124 AT--GEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
AF FD D G I+ EL T + +G + T I+ EVD D G I ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D DG I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGDGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E + +AF+ FDKD GYI+ EL N+G+ +T E++ E D D DG+++Y+E
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 94 FRAMMKS 100
F MM +
Sbjct: 63 FVQMMTA 69
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E + +AF+ FDKD GYI+ EL N+G+ +T E++ E D D DG+++Y+E
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 59
Query: 94 FRAMMKS 100
F MM +
Sbjct: 60 FVQMMTA 66
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 8 DIDGNRTIVYIEFITATMQ-RHKLERFERLYKAFQHFDKDNTGYITVDELETAFK---GY 63
D DGN + + EFI Q K ++ ++L AF+ +D D GYI+ EL K G
Sbjct: 62 DTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 121
Query: 64 NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
N+ D + + + D+D DGRIS++EF A++
Sbjct: 122 NLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
+ +RL K F+ D DN+G ++V+E ++ + + + ++ D D +G +
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEEF------MSLPELQQNPLVQRVIDIFDTDGNGEVD 70
Query: 91 YDEF 94
+ EF
Sbjct: 71 FKEF 74
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 8 DIDGNRTIVYIEFITATMQ-RHKLERFERLYKAFQHFDKDNTGYITVDELETAFK---GY 63
D DGN + + EFI Q K ++ ++L AF+ +D D GYI+ EL K G
Sbjct: 63 DTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 122
Query: 64 NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
N+ D + + + D+D DGRIS++EF A++
Sbjct: 123 NLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
+ +RL K F+ D DN+G ++V+E ++ + + + ++ D D +G +
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEEF------MSLPELQQNPLVQRVIDIFDTDGNGEVD 71
Query: 91 YDEF 94
+ EF
Sbjct: 72 FKEF 75
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E + +AF+ FDKD GYI+ EL N+G+ +T E++ E D D DG+++Y+E
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 94 FRAMM 98
F MM
Sbjct: 63 FVQMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E + +AF+ FDKD GYI+ EL N+G+ +T E++ E D D DG+++Y+E
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 94 FRAMMKS 100
F MM +
Sbjct: 64 FVQMMTA 70
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E + +AF+ FDKD GYI+ EL N+G+ +T E++ E D D DG+++Y+E
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 94 FRAMMKS 100
F MM +
Sbjct: 66 FVQMMTA 72
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E + +AF+ FDKD GYI+ EL N+G+ +T E++ E D D DG+++Y+E
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 94 FRAMMKS 100
F MM +
Sbjct: 67 FVQMMTA 73
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 8 DIDGNRTIVYIEFITATMQ-RHKLERFERLYKAFQHFDKDNTGYITVDELETAFK---GY 63
D DGN + + EFI Q K ++ ++L AF+ +D D GYI+ EL K G
Sbjct: 49 DTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 108
Query: 64 NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
N+ D + + + D+D DGRIS++EF A++
Sbjct: 109 NLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 143
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
+ +RL K F+ D DN+G ++V+E ++ + + + ++ D D +G +
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEF------MSLPELQQNPLVQRVIDIFDTDGNGEVD 57
Query: 91 YDEF 94
+ EF
Sbjct: 58 FKEF 61
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 8 DIDGNRTIVYIEFITATMQ-RHKLERFERLYKAFQHFDKDNTGYITVDELETAFK---GY 63
D DGN + + EFI Q K ++ ++L AF+ +D D GYI+ EL K G
Sbjct: 48 DTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 107
Query: 64 NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
N+ D + + + D+D DGRIS++EF A++
Sbjct: 108 NLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 142
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
+ +RL K F+ D DN+G ++V+E ++ + + + ++ D D +G +
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEF------MSLPELQQNPLVQRVIDIFDTDGNGEVD 56
Query: 91 YDEF 94
+ EF
Sbjct: 57 FKEF 60
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E L F+ FDK+ GYI +DEL+ + G+ +T +E+M + D++ DGRI YDE
Sbjct: 6 EELSDLFRMFDKNADGYIDLDELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 94 FRAMMKS 100
F MK
Sbjct: 64 FLEFMKG 70
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 5 TEADIDGNRTIVYIEFIT--ATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKG 62
T D D N I + EFIT +T R LE E+L AF+ +D ++ GYIT DE+ T
Sbjct: 70 TVFDKDNNGFIHFEEFITVLSTTSRGTLE--EKLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 63 -YNM--------GDDVTIAMK-KEIMSEVDRDKDGRISYDEFR 95
Y M D+ T M+ K+I +D+++DG I+ DEFR
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 40 FQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEV-DRDKDGRISYDEFRAMM 98
F FDKDN G+I +E T + G T+ K E+ D + DG I++DE ++
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRG---TLEEKLSWAFELYDLNHDGYITFDEMLTIV 125
Query: 99 KS 100
S
Sbjct: 126 AS 127
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E + KAF+ FD DN+G IT+ +L K +G+++T +E+++E DR+ D I DE
Sbjct: 9 EEILKAFRLFDDDNSGTITIKDLRRVAK--ELGENLTEEELQEMIAEADRNDDNEIDEDE 66
Query: 94 FRAMMK 99
F +MK
Sbjct: 67 FIRIMK 72
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLERFER-LYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D+DGN I + EF+ ++ K E+ L +AF+ FDK+ G I+ EL+ +
Sbjct: 55 EIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL--TS 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGT 102
+G+ +T A +++ EV D G I+ +F A++ G+
Sbjct: 113 IGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGS 149
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKDN G I+ EL T + ++G + A ++M+E+D D + +I
Sbjct: 8 EQIAEFKEAFALFDKDNNGSISSSELATVMR--SLGLSPSEAEVNDLMNEIDVDGNHQIE 65
Query: 91 YDEFRAMMKSGTHLQANNNNNRLY 114
+ EF A+M L++N++ L
Sbjct: 66 FSEFLALMS--RQLKSNDSEQELL 87
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKDN+G I+ EL T + ++G + A ++M+E+D D + I
Sbjct: 8 EQIAEFKEAFALFDKDNSGSISASELATVMR--SLGLSPSEAEVADLMNEIDVDGNHAIE 65
Query: 91 YDEFRAMMKSGTHLQANNNNNRLY 114
+ EF A+M L+ N++ L
Sbjct: 66 FSEFLALMS--RQLKCNDSEQELL 87
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLERFER-LYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D+DGN I + EF+ ++ K E+ L +AF+ FDK+ G I+ EL+ +
Sbjct: 55 EIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVL--TS 112
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
+G+ +T A E++ EV D G I+ +F A++
Sbjct: 113 IGEKLTDAEVDEMLREV-SDGSGEINIKQFAALL 145
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 65
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAM 97
+AF FDKD G ITV+EL T + + + T ++++SEVD D +G I +DEF ++
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQ--NPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 98 M 98
M
Sbjct: 72 M 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAM 97
+AF FDKD G ITV+EL T + + + T ++++SEVD D +G I +DEF ++
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQ--NPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 98 M 98
M
Sbjct: 72 M 72
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E L +AF+ FDKD G+I+ EL N+G+ +T E++ E D D DG+I+Y+E
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMT--NLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 94 FRAMM 98
F +M
Sbjct: 62 FVKVM 66
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 5 TEADIDGNRTIVYIEFI-TATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGY 63
EA+ + N + + EF Q + + E + +AF+ FD+D G+I+ EL F
Sbjct: 53 AEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELR--FVMI 110
Query: 64 NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
N+G+ VT E++ E D D DG I+Y+EF M+
Sbjct: 111 NLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMI 145
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ AF FDK+ TG I EL T + +G + T A +++++E + + +G+++
Sbjct: 7 EQIAEFKDAFVQFDKEGTGKIATRELGTLMR--TLGQNPTEAELQDLIAEAENNNNGQLN 64
Query: 91 YDEFRAMM 98
+ EF +M
Sbjct: 65 FTEFCGIM 72
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKDN G I+ EL T + ++G + A ++M+E+D D + +I
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMR--SLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 91 YDEFRAMMKSGTHLQANNNNNRLY 114
+ EF A+M L++N++ L
Sbjct: 65 FSEFLALMS--RQLKSNDSEQELL 86
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLERFER-LYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D+DGN I + EF+ ++ K E+ L +AF+ FDK+ G I+ EL+ +
Sbjct: 54 EIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL--TS 111
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
+G+ +T A +++ EV D G I+ +F A++
Sbjct: 112 IGEKLTDAEVDDMLREV-SDGSGEINIQQFAALLS 145
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKDN G I+ EL T + ++G + A ++M+E+D D + +I
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMR--SLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 91 YDEFRAMMKSGTHLQANNNNNRLY 114
+ EF A+M L++N++ L
Sbjct: 65 FSEFLALM--SRQLKSNDSEQELL 86
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLERFER-LYKAFQHFDKDNTGYITVDEL 56
E D+DGN I + EF+ ++ K E+ L +AF+ FDK+ G I+ EL
Sbjct: 54 EIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAEL 105
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E + KAF+ FD D TG I+ L+ K +G+++T +E++ E DRD DG +S E
Sbjct: 11 EEILKAFKLFDDDETGKISFKNLKRVAK--ELGENLTDEELQEMIDEADRDGDGEVSEQE 68
Query: 94 FRAMMK 99
F +MK
Sbjct: 69 FLRIMK 74
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E L F+ FDK+ GYI ++EL+ + G+ +T +E+M + D++ DGRI YDE
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 94 FRAMMKS 100
F MK
Sbjct: 63 FLEFMKG 69
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 17 YIEFITATMQR-HKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKK 75
+ +F+T Q+ + + E + KAF+ FD D TG I+ L+ K +G+++T +
Sbjct: 3 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAK--ELGENLTDEELQ 60
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E++ E DRD DG +S EF +MK
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIMK 84
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQISEFKEAFSLFDKDGDGCITTKELGTVMR--SLGQNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF +M
Sbjct: 65 FPEFLNLM 72
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E L +AF+ FD+D G I+ EL N+G+ +T E++ E D D DG I+Y+E
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMT--NLGEKLTDDEVDEMIREADIDGDGHINYEE 65
Query: 94 FRAMMKS 100
F MM S
Sbjct: 66 FVRMMVS 72
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF FDKDN G I+ EL T + ++G + A ++M+E+D D + +I
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMR--SLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 91 YDEFRAMMK 99
+ EF A+M
Sbjct: 65 FSEFLALMS 73
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E L F+ FDK+ GYI ++EL+ + G+ +T +E+M + D++ DGRI YDE
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 94 FRAMMKS 100
F MK
Sbjct: 65 FLEFMKG 71
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E L F+ FDK+ GYI ++EL+ + G+ +T +E+M + D++ DGRI YDE
Sbjct: 15 EELSDLFRMFDKNADGYIDLEELKIMLQAT--GETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 94 FRAMMKS 100
F MK
Sbjct: 73 FLEFMKG 79
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E L F+ FDK+ GYI ++EL+ + G+ +T +E+M + D++ DGRI YDE
Sbjct: 10 EELSDLFRMFDKNADGYIDLEELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 94 FRAMMKS 100
F MK
Sbjct: 68 FLEFMKG 74
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E + +AF+ FDKD GYI+ +L N+G+ +T E++ E D D DG+++Y++
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 94 FRAMMKS 100
F MM +
Sbjct: 65 FVQMMTA 71
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E + +AF+ DKD GYI+ EL N+G+ +T E++ E D D DG+++Y+E
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEE 86
Query: 94 FRAMMKS 100
F MM +
Sbjct: 87 FVQMMTA 93
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
K F DKD +G+I DEL + KG++ D++ K +M+ D+D DG+I +EF
Sbjct: 45 KVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFST 104
Query: 97 MM 98
++
Sbjct: 105 LV 106
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ +AF +DKD G IT EL T + ++G + T A +++++EVD D +G I
Sbjct: 7 EQIAEFKEAFSLYDKDGDGTITTKELGTVMR--SLGLNPTEAELQDMINEVDADGNGTID 64
Query: 91 YDEFRAMM 98
+ EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
+ K F DKD +G+I DEL + KG++ D++ K +M+ D+D DG+I +EF
Sbjct: 7 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
Query: 95 RAMM 98
++
Sbjct: 67 STLV 70
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
K F DKD +G+I DEL + KG++ D++ K +M+ D+D DG+I +EF
Sbjct: 45 KVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
Query: 97 MM 98
++
Sbjct: 105 LV 106
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
K F DKD +G+I DEL KG++ D++ K +M+ D+D DG+I DEF
Sbjct: 46 KVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFST 105
Query: 97 MM 98
++
Sbjct: 106 LV 107
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 8 DIDGNRTIVYIEFITATMQR-HKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMG 66
D +G + +F+T Q+ + + E + KAF+ FD D TG I+ L+ K +G
Sbjct: 77 DKEGTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAK--ELG 134
Query: 67 DDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
+++T +E + E DRD DG +S EF + K
Sbjct: 135 ENLTDEELQEXIDEADRDGDGEVSEQEFLRIXK 167
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETA 59
E+ + + +AF FD D TG I V EL+ A
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVA 56
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAM 97
+AF+ FD + TG+IT + L+T K + G V A E+ +E D +G+I + EF +M
Sbjct: 10 EAFELFDSERTGFITKEGLQTVLKQF--GVRVEPAAFNEMFNEADATGNGKIQFPEFLSM 67
Query: 98 M 98
M
Sbjct: 68 M 68
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 6 EADIDGNRTIVYIEFITATMQRHKLERFER-LYKAFQHFDKDNTGYITVDELETAFKGYN 64
EAD GN I + EF++ +R K E L +AF+ FD + TGYI L+ A N
Sbjct: 50 EADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDAL--LN 107
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
+GD + E + + +K G+I YD F
Sbjct: 108 LGDRLKPHEFAEFLGITETEK-GQIRYDNF 136
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ + + AF+ DK+ G I EL N+GD +T + +E+M EV DG I+
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLL--LNLGDALTSSEVEELMKEVSVSGDGAIN 130
Query: 91 YDEFRAMMKSGTHL 104
Y+ F M+ +G L
Sbjct: 131 YESFVDMLVTGYPL 144
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIA 72
+++ + FQ FDKDN G ++++EL +A + ++G + T A
Sbjct: 5 DQIQECFQIFDKDNDGKVSIEELGSALR--SLGKNPTNA 41
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 35 RLYKAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDE 93
++ + F+ DKD +G+I +EL+ KG++ G D+ K +++ D D DG+I DE
Sbjct: 42 QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE 101
Query: 94 FRAMM 98
F M+
Sbjct: 102 FAKMV 106
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 6 EADIDGNRTIVYIEFITATMQRHK-LERFERLYKAFQHFDKDNTGYITVDEL 56
E D DGN TI + EF+T ++ K + E + +AF+ FDKD GYI+ EL
Sbjct: 9 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 25 MQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRD 84
M+ K + E L F+ FDK+ G+I ++EL + G+ V +++M + D++
Sbjct: 1 MEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT--GEHVIEEDIEDLMKDSDKN 58
Query: 85 KDGRISYDEFRAMMKS 100
DGRI +DEF MM+
Sbjct: 59 NDGRIDFDEFLKMMEG 74
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
K F+ D D +G+I +EL+ K + G D+T A K + D+D DG+I DEF
Sbjct: 46 KVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFET 105
Query: 97 MM 98
++
Sbjct: 106 LV 107
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 7 ADIDGNRTIVYIEFITATMQ--RHKLERFERLYKAFQH-----FDKDNTGYITVDELETA 59
AD DG++ I EF+T ++ R K +RF + + F H D D G +TV + A
Sbjct: 64 ADRDGDQRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADTARA 123
Query: 60 FKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
+ + +D + ++ + +D D DG++ E
Sbjct: 124 LTAFGVPED----LARQAAAALDTDGDGKVGETE 153
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 7 ADIDGNRTIVYIEFITATMQ--RHKLERFERLYKAFQH-----FDKDNTGYITVDELETA 59
AD DG++ I EF+T ++ R K +RF + + F H D D G +TV + A
Sbjct: 64 ADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARA 123
Query: 60 FKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
+ + +D + ++ + +D D DG++ E
Sbjct: 124 LTAFGVPED----LARQAAAALDTDGDGKVGETE 153
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 33 FERLYKAFQHFDKDNTGYITVDELETAFK--GYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E + +AF+ FD+D G+I+ EL TA + GY M ++V + + I+ +D D DG++
Sbjct: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGY-MPNEVELEV---IIQRLDMDGDGQVD 90
Query: 91 YDEFRAMMKS 100
++EF ++
Sbjct: 91 FEEFVTLLGP 100
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
K F DKD G+I DEL + KG++ D++ K +M+ D+D DG+I +EF
Sbjct: 45 KVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
Query: 97 MM 98
++
Sbjct: 105 LV 106
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFR 95
L +AF+ DK+ G I VD L K ++GD++T + +++E D D G + Y+EF+
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILK--SLGDELTEDEIENMIAETDTDGSGTVDYEEFK 66
Query: 96 AMMKS 100
+M S
Sbjct: 67 CLMMS 71
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGD-DVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
KAF D+D +G+I DEL+ + ++ +T A K +++ D+D DG I DEF A
Sbjct: 45 KAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAA 104
Query: 97 MMKS 100
M+K+
Sbjct: 105 MIKA 108
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 32 RFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISY 91
+ E KAFQ FDK++TG ++V +L G +G+ +T A E++ V+ D +G I Y
Sbjct: 81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTG--LGEKLTDAEVDELLKGVEVDSNGEIDY 138
Query: 92 DEF 94
+F
Sbjct: 139 KKF 141
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
K F DKD +G+I DEL + KG++ D++ K +M+ D+D G+I +EF
Sbjct: 45 KVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEFST 104
Query: 97 MM 98
++
Sbjct: 105 LV 106
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 26 QRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDK 85
+R E L + F+ D DN+G IT DEL+ K +G ++ + K++M D DK
Sbjct: 15 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK--RVGSELMESEIKDLMDAADIDK 72
Query: 86 DGRISYDEFRA 96
G I Y EF A
Sbjct: 73 SGTIDYGEFIA 83
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 29 KLERFERLYKAFQHFDKDNTGYITVDELETA-FKGYNMGDDVTIAMKKEIMSEVDRDKDG 87
L+++ R+Y+ F D+D +G + ++EL F G G ++ +M D D +G
Sbjct: 46 PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPG---GIRLSPQTALRMMRIFDTDFNG 102
Query: 88 RISYDEFRAM---MKSGTHLQANNNNNR 112
IS+ EF AM M+ +L N+ NR
Sbjct: 103 HISFYEFMAMYKFMELAYNLFVMNDRNR 130
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ + + +AF FD D +G I EL+ A + +G + K+++SE+D+D G I
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRA--LGFEPKKEEIKKMISEIDKDGSGTID 84
Query: 91 YDEFRAMM 98
++EF MM
Sbjct: 85 FEEFLTMM 92
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDV-TIAMKKEIMSEVDRDKDGRISYD 92
+++ K F D+D +G+I +EL+ K ++ V T A K ++ D D DG+I +
Sbjct: 41 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 100
Query: 93 EFRAMMKS 100
EF++++K+
Sbjct: 101 EFQSLVKA 108
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E KAFQ FDK++TG ++V +L G +G+ +T A E++ V+ D +G I Y +
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTG--LGEKLTDAEVDELLKGVEVDSNGEIDYKK 62
Query: 94 F 94
F
Sbjct: 63 F 63
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDV-TIAMKKEIMSEVDRDKDGRISYD 92
+++ K F D+D +G+I +EL+ K ++ V T A K ++ D D DG+I +
Sbjct: 42 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 101
Query: 93 EFRAMMKS 100
EF++++K+
Sbjct: 102 EFQSLVKA 109
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 20/102 (19%)
Query: 8 DIDGNRTIVYIEFITA--TMQRHKLERFERLYKAFQHFDKDNTGYITVDE-LETAFKGYN 64
D +G+ TI + EFI A R KLE ++L AF +D D GYI+ E LE Y
Sbjct: 73 DANGDGTIDFREFIIALSVTSRGKLE--QKLKWAFSMYDLDGNGYISKAEMLEIVQAIYK 130
Query: 65 MGDDVTIAMK------------KEIMSEVDRDKDGRISYDEF 94
M V+ MK ++I ++D ++DG++S +EF
Sbjct: 131 M---VSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 29 KLERFERLYKAFQHFDKDNTGYITVDELETA-FKGYNMGDDVTIAMKKEIMSEVDRDKDG 87
L+++ R+Y+ F D+D +G + ++EL F G G ++ +M D D +G
Sbjct: 46 PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPG---GIRLSPQTALRMMRIFDTDFNG 102
Query: 88 RISYDEFRAMMK 99
IS+ EF AM K
Sbjct: 103 HISFYEFMAMYK 114
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 35 RLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMK-KEIMSEVDRDKDGRISYDE 93
+L + F+ D D +G+I DEL+ + + G V A + K ++ D D DG+I +E
Sbjct: 42 QLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEE 101
Query: 94 FRAMMKS 100
F+ M++S
Sbjct: 102 FQEMVQS 108
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFR 95
L AF+ FD + G I+ EL A + +G V +EI+ +VD + DGR+ ++EF
Sbjct: 90 LRDAFREFDTNGDGEISTSELREAMRAL-LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Query: 96 AMMK 99
MM
Sbjct: 149 RMMS 152
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 29 KLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGR 88
+ E E L +AF+ FDKD GYI +L + MG T E+ +++ + G
Sbjct: 6 RPEEIEELREAFREFDKDKDGYINCRDLGNCMR--TMGYMPTEMELIELSQQINMNLGGH 63
Query: 89 ISYDEFRAMMKSGTHLQA 106
+ +D+F +M G L A
Sbjct: 64 VDFDDFVELM--GPKLLA 79
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 6 EADIDGNRTIVYIEF-ITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYN 64
E D +G + Y +F I + K + + + +AFQ FD D+TG I++ L K
Sbjct: 67 EYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAK--E 124
Query: 65 MGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAM 97
+G+ +T + ++ E D D DG I+ +EF A+
Sbjct: 125 LGETLTDEELRAMIEEFDLDGDGEINENEFIAI 157
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDR-DKDGR- 88
E+ + +Y+AF FD +N G++ EL+ A K +G ++ K+EI+ +D D +GR
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA--LGFELP---KREILDLIDEYDSEGRH 74
Query: 89 -ISYDEFRAMM 98
+ YD+F +M
Sbjct: 75 LMKYDDFYIVM 85
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ + + +AF FD + TG I EL+ A + +G DV E+M+E DR+ +G I
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRA--LGFDVKKPEILELMNEYDREGNGYIG 61
Query: 91 YDEFRAMM 98
+D+F +M
Sbjct: 62 FDDFLDIM 69
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFR 95
L AF+ FD + G I+ EL A + +G V +EI+ +VD + DGR+ ++EF
Sbjct: 104 LRDAFREFDTNGDGEISTSELREAMRKL-LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 162
Query: 96 AMM 98
MM
Sbjct: 163 RMM 165
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 29 KLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGR 88
+ E E L +AF+ FDKD GYI +L + MG T E+ +++ + G
Sbjct: 20 RPEEIEELREAFREFDKDKDGYINCRDLGNCMR--TMGYMPTEMELIELSQQINMNLGGH 77
Query: 89 ISYDEFRAMMKSGTHLQA 106
+ +D+F +M G L A
Sbjct: 78 VDFDDFVELM--GPKLLA 93
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E AF FD D G I+ EL T + +G + T I+ EVD D G I
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMR--MLGQNPTKCELDAIICEVDEDGSGTID 74
Query: 91 YDEFRAMM 98
++EF MM
Sbjct: 75 FEEFLVMM 82
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGD-DVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
KAF D+D +G+I DEL+ + ++ G +T A K + D D DG I DE+ A
Sbjct: 46 KAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAA 105
Query: 97 MMKS 100
++K+
Sbjct: 106 LVKA 109
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFR 95
L AF+ FD + G I+ EL A + +G V +EI+ +VD + DGR+ ++EF
Sbjct: 90 LRDAFREFDTNGDGEISTSELREAMRKL-LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Query: 96 AMM 98
MM
Sbjct: 149 RMM 151
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 29 KLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGR 88
+ E E L +AF+ FDKD GYI +L + MG T E+ +++ + G
Sbjct: 6 RPEEIEELREAFREFDKDKDGYINCRDLGNCMR--TMGYMPTEMELIELSQQINMNLGGH 63
Query: 89 ISYDEFRAMMKSGTHLQA 106
+ +D+F +M G L A
Sbjct: 64 VDFDDFVELM--GPKLLA 79
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFR 95
L AF+ FD + G I+ EL A + +G V +EI+ +VD + DGR+ ++EF
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKL-LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 67
Query: 96 AMM 98
MM
Sbjct: 68 RMM 70
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDEL----ETAFKGY 63
D D N I + EFI A + E ++L AFQ +D DN G I+ DE+ + +K
Sbjct: 73 DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMV 132
Query: 64 N----MGDDVTIAMKK--EIMSEVDRDKDGRISYDEF 94
+ +D K+ +I + +D++KDG+++ +EF
Sbjct: 133 GSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
Score = 25.0 bits (53), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 8/58 (13%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMG---DDVTIAMKKEIMSEVDRDKDGRISYDE 93
F FD D GYI E A + G D + A + D D +G ISYDE
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQL-----YDLDNNGLISYDE 120
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 40 FQHFDKDNTGYITVDELETAFKGYNMGD-DVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
F+ D D +GY+ +EL+ + + G ++T + K +M+ D D DG+I +EF+ M+
Sbjct: 48 FRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMV 107
Query: 99 KS 100
S
Sbjct: 108 HS 109
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E+ + + +AF FD D TG I V EL+ A + +G + K+++SE+D++ G+++
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRA--LGFEPKKEEIKKMISEIDKEGTGKMN 85
Query: 91 YDEFRAMM 98
+ +F +M
Sbjct: 86 FGDFLTVM 93
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 40 FQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
F+ D D +GY+ DEL+ + + ++T + K +M D D DG+I DEF+ M+
Sbjct: 47 FRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMV 106
Query: 99 KS 100
S
Sbjct: 107 HS 108
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 17 YIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKE 76
YI ++R L+ +R AFQ FD D+TG I++ L K +G+ +T +
Sbjct: 82 YIVXGEKILKRDPLDEIKR---AFQLFDDDHTGKISIKNLRRVAK--ELGETLTDEELRA 136
Query: 77 IMSEVDRDKDGRISYDEFRAMM 98
+ E D D DG I+ +EF A+
Sbjct: 137 XIEEFDLDGDGEINENEFIAIC 158
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDR-DKDGR- 88
E+ + +Y+AF FD +N G++ EL+ A K +G ++ K+EI+ +D D +GR
Sbjct: 20 EQKQEIYEAFSLFDXNNDGFLDYHELKVAXKA--LGFELP---KREILDLIDEYDSEGRH 74
Query: 89 -ISYDEF 94
YD+F
Sbjct: 75 LXKYDDF 81
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
KAF D+D +G+I DEL+ + + +T K + D D DG+I DEF A
Sbjct: 46 KAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEFTA 105
Query: 97 MMKS 100
++K+
Sbjct: 106 LVKA 109
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
+ F+ FD + G I+ EL A K VT + +M+E+D D DG IS+DEF
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLGS---VTPDEVRRMMAEIDTDGDGFISFDEF 68
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 28 HKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDG 87
H ++ ER + F+ FD + G I+ EL A K +G +T K +M+E+D D DG
Sbjct: 4 HPQDKAER-ERIFKRFDANGDGKISAAELGEALK--TLGS-ITPDEVKHMMAEIDTDGDG 59
Query: 88 RISYDEF 94
IS+ EF
Sbjct: 60 FISFQEF 66
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAM 97
+AFQ FDKDN +T +EL T + +G + T EI+ + D+D G+ + F +
Sbjct: 18 EAFQLFDKDNDNKLTAEELGTVMRA--LGANPTKQKISEIVKDYDKDNSGKFDQETFLTI 75
Query: 98 M 98
M
Sbjct: 76 M 76
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKG--YNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
L+ FQ DKD +G I+ +EL+ A + + VT+ + I+S DR+ +++ E
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTV---RSIISMFDRENKAGVNFSE 84
Query: 94 FRAMMKSGTHLQ 105
F + K T Q
Sbjct: 85 FTGVWKYITDWQ 96
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
F+ +D+DN+G I +EL+ A G+ G ++ ++ + DR G+I++D+F
Sbjct: 98 VFRTYDRDNSGMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
AF FD D G I+ EL T + +G + T I+ EVD D G I ++EF MM
Sbjct: 14 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 71
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
F+ +D+DN+G I +EL+ A GY + D ++ + DR G+I++D+F
Sbjct: 76 VFRTYDRDNSGMIDKNELKQALSGYRLSD----QFHDILIRKFDRQGRGQIAFDDF 127
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKG--YNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
L+ FQ DKD +G I+ EL+ A + + VT+ + I+S DR+ +++ E
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTV---RSIISMFDRENKAGVNFSE 62
Query: 94 FRAMMKSGTHLQ 105
F + K T Q
Sbjct: 63 FTGVWKYITDWQ 74
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGD-DVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
KAF D+D +G+I DEL+ + + G +T A K + D D DG I +E+ A
Sbjct: 46 KAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEWVA 105
Query: 97 MMKS 100
++K+
Sbjct: 106 LVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGD-DVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
KAF D+D +G+I DEL+ + + G +T A K + D D DG I +E+ A
Sbjct: 45 KAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEWVA 104
Query: 97 MMKS 100
++K+
Sbjct: 105 LVKA 108
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
AF FD D G I+ EL T + +G + T I+ EVD D G I ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKG--YNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
L+ FQ DKD +G I+ EL+ A + + VT+ + I+S DR+ +++ E
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTV---RSIISMFDRENKAGVNFSE 65
Query: 94 FRAMMKSGTHLQ 105
F + K T Q
Sbjct: 66 FTGVWKYITDWQ 77
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 39 AFQHFDKDNTGYITVDELETAFK--GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
F+ +D+DN+G I +EL+ A GY + D ++ + DR G+I++D+F
Sbjct: 79 VFRTYDRDNSGMIDKNELKQALSGAGYRLSD----QFHDILIRKFDRQGRGQIAFDDF 132
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKG--YNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
L+ FQ DKD +G I+ EL+ A + + VT+ + I+S DR+ +++ E
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTV---RSIISMFDRENKAGVNFSE 65
Query: 94 FRAMMKSGTHLQ 105
F + K T Q
Sbjct: 66 FTGVWKYITDWQ 77
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
F+ +D+DN+G I +EL+ A G+ G ++ ++ + DR G+I++D+F
Sbjct: 79 VFRTYDRDNSGMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKG--YNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
L+ FQ DKD +G I+ EL+ A + + VT+ + I+S DR+ +++ E
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTV---RSIISMFDRENKAGVNFSE 62
Query: 94 FRAMMKSGTHLQ 105
F + K T Q
Sbjct: 63 FTGVWKYITDWQ 74
Score = 32.3 bits (72), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
F+ +D+DN+G I +EL+ A G+ G ++ ++ + DR G+I++D+F
Sbjct: 76 VFRTYDRDNSGMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
KAF D+D +G+I DEL+ + + +T K + D D DG+I DE+ A
Sbjct: 45 KAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEWTA 104
Query: 97 MMKS 100
++K+
Sbjct: 105 LVKA 108
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKG--YNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
L+ FQ DKD +G I+ EL+ A + + VT+ + I+S DR+ +++ E
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTV---RSIISMFDRENKAGVNFSE 83
Query: 94 FRAMMKSGTHLQ 105
F + K T Q
Sbjct: 84 FTGVWKYITDWQ 95
Score = 32.3 bits (72), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
F+ +D+DN+G I +EL+ A G+ G ++ ++ + DR G+I++D+F
Sbjct: 97 VFRTYDRDNSGMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
E K FQ FDKD TG I V EL ++G+ ++ E++ V KDG ++Y +
Sbjct: 76 EEFVKGFQVFDKDATGMIGVGELRYVLT--SLGEKLSNEEMDELLKGVPV-KDGMVNYHD 132
Query: 94 FRAMM 98
F M+
Sbjct: 133 FVQMI 137
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKG--YNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
L+ FQ DKD +G I+ EL+ A + + VT+ + I+S DR+ +++ E
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTV---RSIISMFDRENKAGVNFSE 61
Query: 94 FRAMMKSGTHLQ 105
F + K T Q
Sbjct: 62 FTGVWKYITDWQ 73
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
F+ +D+DN+G I +EL+ A G+ G ++ ++ + DR G+I++D+F
Sbjct: 75 VFRTYDRDNSGMIDKNELKQALSGF--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 11 GNRTIVYIEFITATMQRHKLER--FERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDD 68
G +++ + EF+ A E+ F +AF+ FD++ G+I+ EL G +G+
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSG--LGER 116
Query: 69 VTIAMKKEI--MSEVDRDKDGRISYDEFRAMMKSGTH 103
++ EI ++++ D +G + Y+EF + +G +
Sbjct: 117 LSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMAGPY 153
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFK--GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
+ + F+ FD + G I++ EL A + G D+V + +M+E+D D DG I ++E
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLGSTSADEV-----QRMMAEIDTDGDGFIDFNE 59
Query: 94 FRAMMKSGTHL 104
F + + L
Sbjct: 60 FISFCNANPGL 70
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFK--GYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
+ + F+ FD + G I++ EL A + G D+V + +M+E+D D DG I ++E
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLGSTSADEV-----QRMMAEIDTDGDGFIDFNE 58
Query: 94 FRAMMKSGTHL 104
F + + L
Sbjct: 59 FISFCNANPGL 69
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 29 KLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGR 88
+ E E L +AF+ FDKD GYI +L + MG T E+ +++ + G
Sbjct: 5 RPEEIEELREAFREFDKDKDGYINCRDLGNCMR--TMGYMPTEMELIELSQQINMNLGGH 62
Query: 89 ISYDEFRAMM 98
+ +D+F +M
Sbjct: 63 VDFDDFVELM 72
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAF--KGYNMGDDVTIAMKKEIMSEVDRDKDGR 88
E+ +F HFD+ TG + ++ GYNMG+ A IMS VD ++ G
Sbjct: 722 EQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGE----AEFARIMSIVDPNRMGV 777
Query: 89 ISYDEF 94
+++ F
Sbjct: 778 VTFQAF 783
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 8 DIDGNRTIVYIEFI--TATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKG-YN 64
D D N + + +FI + + R ++ E+L AF +D + GYIT +E+ K Y+
Sbjct: 112 DTDHNGAVSFEDFIKGLSILLRGTVQ--EKLNWAFNLYDINKDGYITKEEMLDIMKAIYD 169
Query: 65 MGDDVTIAMKKE---------IMSEVDRDKDGRISYDEF 94
M T + KE ++D++KDG ++ DEF
Sbjct: 170 MMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKG-YNM- 65
D DGN I + +F+ + E+L AF +D + G IT +E+ K Y+M
Sbjct: 139 DADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMM 198
Query: 66 --------GDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
+D + + ++DR++DG ++ DEF
Sbjct: 199 GRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 11 GNRTIVYIEFITATMQRHKLER--FERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDD 68
G +++ + EF+ A E+ + +AF+ FD++ G+I+ EL G +G+
Sbjct: 60 GEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSG--LGER 117
Query: 69 VTIAMKKEI--MSEVDRDKDGRISYDEFRAMMKSGTH 103
++ EI ++++ D +G + Y+EF + +G +
Sbjct: 118 LSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMTGPY 154
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 11 GNRTIVYIEFITATMQRHKLER--FERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDD 68
G +++ + EF+ A E+ + +AF+ FD++ G+I+ EL G +G+
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSG--LGER 116
Query: 69 VTIAMKKEI--MSEVDRDKDGRISYDEFRAMMKSGTH 103
++ EI ++++ D +G + Y+EF + +G +
Sbjct: 117 LSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMTGPY 153
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 39 AFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
AF FD D G I+ L T + +G + T I+ EVD D G I ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKALGTVMR--MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 32 RFERLYKAFQHFDKDNTGYITVDELETAFK---GYNMGDDVTIAMKKEIMSEVDRDKDGR 88
R +L+ AF+ +D D I+ DEL + G N+ D+ ++ + E D+D D
Sbjct: 111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSA 170
Query: 89 ISYDEFRAMMK 99
IS+ EF +++
Sbjct: 171 ISFTEFVKVLE 181
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 36 LYKAFQHFDKDNTGYITVDELET------AFKGYNMGDDVTIAMKKEIMSEVDRDKDGRI 89
L AF+ D + GY+T EL+T A+K + D V A K ++ D++ DG+I
Sbjct: 9 LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALS-KDKVKEASAK-LIKMADKNSDGKI 66
Query: 90 SYDEF 94
S +EF
Sbjct: 67 SKEEF 71
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 17 YIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVT 70
Y+E+++ + H + E L K F HFD + TGY+T +++ + GD +T
Sbjct: 69 YLEYLSICV--HDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTW--GDALT 118
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 32 RFERLYKAFQHFDKDNTGYITVDELETAFK---GYNMGDDVTIAMKKEIMSEVDRDKDGR 88
R +L+ AF+ +D D I+ DEL + G N+ D+ ++ + E D+D D
Sbjct: 111 RSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSA 170
Query: 89 ISYDEFRAMMK 99
IS+ EF +++
Sbjct: 171 ISFTEFVKVLE 181
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 15 IVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDE-LETAFKGYNMGDDVTIAM 73
I + EFI A + E+L AF+ +D DN GYIT +E L+ Y M + T+ +
Sbjct: 80 IEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGN-TVEL 138
Query: 74 KKE----------IMSEVDRDKDGRISYDEFRAMMKSGTHL 104
+E I + +D++ DG+++ EF+ K+ +
Sbjct: 139 PEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSI 179
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
KAF +D +G+I DEL+ + + +T K + D D DG+I DE+ A
Sbjct: 45 KAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEWTA 104
Query: 97 MMKS 100
++K+
Sbjct: 105 LVKA 108
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 34 ERLYKAFQHF--DKDNTGYITVDELETAFKGYNMGDDVTIAMKK--EIMSEVDRDKDGRI 89
E + AF+ F + + I+ +EL+ + +G + M E++ EVD++ DG +
Sbjct: 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQ--TLGPSLLKGMSTLDEMIEEVDKNGDGEV 62
Query: 90 SYDEFRAMMK 99
S++EF MMK
Sbjct: 63 SFEEFLVMMK 72
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 15 IVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMK 74
I+ F+ + ++++ L +AF+ +DK+ GYI+ D + D T++ +
Sbjct: 74 IIGARFLGEEVNPEQMQQ--ELREAFRLYDKEGNGYISTDVMREILAEL----DETLSSE 127
Query: 75 --KEIMSEVDRDKDGRISYDEFRAMMKSG 101
++ E+D D G + ++EF +M G
Sbjct: 128 DLDAMIDEIDADGSGTVDFEEFMGVMTGG 156
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 17 YIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVT 70
Y+E++T + H + E L K F HFD +++G++T ++ + + GD +T
Sbjct: 50 YLEYLTXCV--HDRDNXEELIKXFSHFDNNSSGFLTKNQXKNILTTW--GDALT 99
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMK--KEIMSEVDRDKDGRISY 91
+ L +AF+ +DK+ GYI+ D + D T++ + ++ E+D D G + +
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAEL----DETLSSEDLDAMIDEIDADGSGTVDF 58
Query: 92 DEFRAMMKSG 101
+EF +M G
Sbjct: 59 EEFMGVMTGG 68
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 32.0 bits (71), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDD-VTIAMKKEIMSEVDRDKDGRISYD 92
E + +AF+ FD + G I DE + F +G++ +T A +E M E D D +G I
Sbjct: 8 EEILRAFKVFDANGDGVIDFDEFK--FIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIP 65
Query: 93 EFRAMMKSGTH 103
EF ++K +
Sbjct: 66 EFMDLIKKSKN 76
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 38 KAFQHFDKDNTGYITVD---ELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
+ F+ FDK+ G +++D E+ AF Y +D+ + E+D D +G ++ DEF
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIV-----KFFEEIDVDGNGELNADEF 59
Query: 95 RAMMK 99
+ ++
Sbjct: 60 TSCIE 64
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 75 KEIMSEVDRDKDGRISYDEFRAM 97
K + + D++KDG++S DEFR +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREV 26
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNM-GDDVTIAMKKEIMSEVDRDKDGRISYDEFRA 96
KAF +D +G+I DEL+ + + +T K + D D DG+I D++ A
Sbjct: 45 KAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDDWTA 104
Query: 97 MMKS 100
++K+
Sbjct: 105 LVKA 108
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 23 ATMQRHKLERFERLYKAFQHFDKD-NTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEV 81
A +++ E+ AF F +D G I+ EL + +G + T +E++ EV
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMR--MLGQNPTPEELQEMIDEV 64
Query: 82 DRDKDGRISYDEFRAMM 98
D D G + +DEF MM
Sbjct: 65 DEDGSGTVDFDEFLVMM 81
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 11 GNRTIVYIEFITATMQRHKLER--FERLYKAFQHFDKDNTGYITVDELE---TAFKGYNM 65
G +++ + EF+ A E+ F +AF+ FD++ G+I+ EL TA
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 66 GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGTH 103
+DV +K ++++ D +G + Y++F + +G +
Sbjct: 119 DEDVDEIIK---LTDLQEDLEGNVKYEDFVKKVMAGPY 153
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 11 GNRTIVYIEFITATMQRHKLER--FERLYKAFQHFDKDNTGYITVDELE---TAFKGYNM 65
G +++ + EF+ A E+ F +AF+ FD++ G+I+ EL TA
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 66 GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGTH 103
+DV +K ++++ D +G + Y++F + +G +
Sbjct: 119 DEDVDEIIK---LTDLQEDLEGNVKYEDFVKKVMAGPY 153
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An
Ef-Hand Protein From Danio Rerio Dr.36843
Length = 272
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 40 FQHFDKDNTGYITVDELETAFKGY--------NMGDDVTIAMKKEIMSEVDRDKDGRISY 91
+QHFD D+ GYI EL+ F+ + D+ +KK S D DGR+
Sbjct: 17 WQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRLQI 76
Query: 92 DEF 94
+E
Sbjct: 77 EEL 79
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 18/73 (24%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSE------------VDRDK 85
K ++ +D D++GYI+ EL+ K D+ + KK+I D++K
Sbjct: 108 KIWRKYDADSSGYISAAELKNFLK------DLFLQHKKKIPPNKLDEYTDAXXKIFDKNK 161
Query: 86 DGRISYDEFRAMM 98
DGR+ ++ ++
Sbjct: 162 DGRLDLNDLARIL 174
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 11 GNRTIVYIEFITATMQRHKLER--FERLYKAFQHFDKDNTGYITVDELE---TAFKGYNM 65
G +++ + EF+ A E+ F +AF+ FD++ G+I+ EL TA
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 66 GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGTH 103
+DV +K ++++ D +G + Y++F + +G +
Sbjct: 119 DEDVDEIIK---LTDLQEDLEGNVKYEDFVKKVMAGPY 153
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERF-ERLYKAFQHFDKDNTGYITVDELETAFKGY--- 63
D+ N I + EF+ + H E++ AF+ +D TG+I +EL+
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 64 ---NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGTHLQAN 107
+ +D+ M + + DR DG+I DE++ + L N
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKN 190
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 11 GNRTIVYIEFITATMQRHKLER--FERLYKAFQHFDKDNTGYITVDELE---TAFKGYNM 65
G +++ + EF+ A E+ F +AF+ FD++ G+I+ EL TA
Sbjct: 57 GEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 116
Query: 66 GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGTH 103
+DV +K ++++ D +G + Y++F + +G +
Sbjct: 117 DEDVDEIIK---LTDLQEDLEGNVKYEDFVKKVMAGPY 151
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 11 GNRTIVYIEFITATMQRHKLER--FERLYKAFQHFDKDNTGYITVDELE---TAFKGYNM 65
G +++ + EF+ A E+ F +AF+ FD++ G+I+ EL TA
Sbjct: 56 GEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 115
Query: 66 GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGTH 103
+DV +K ++++ D +G + Y++F + +G +
Sbjct: 116 DEDVDEIIK---LTDLQEDLEGNVKYEDFVKKVMAGPY 150
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERF-ERLYKAFQHFDKDNTGYITVDELETAFKGY--- 63
D+ N I + EF+ + H E++ AF+ +D TG+I +EL+
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 64 ---NMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGTHLQAN 107
+ +D+ M + + DR DG+I DE++ + L N
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKN 190
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 39 AFQHFDKD-NTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAM 97
AF F +D G I+ EL + +G + T +E++ EVD D G + +DEF M
Sbjct: 23 AFDIFIQDAEDGCISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 98 M 98
M
Sbjct: 81 M 81
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 11 GNRTIVYIEFITATMQRHKLER--FERLYKAFQHFDKDNTGYITVDELE---TAFKGYNM 65
G +++ + EF+ A E+ F +AF+ FD++ G+I+ EL TA
Sbjct: 56 GEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 115
Query: 66 GDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMKSGT 102
+DV +K ++++ D +G + Y++F + +G
Sbjct: 116 DEDVDEIIK---LTDLQEDLEGNVKYEDFVKKVMAGP 149
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKG 62
D +G+ T+ EF+ A R + AF D+ G +TVD+L + G
Sbjct: 83 DRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSG 137
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GCISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GCISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 16/74 (21%)
Query: 34 ERLYKAFQHFDKDNTGYITVD--------ELETAFKGYNMGDDVTIAMKKEIMSEVDRDK 85
E L F+ +DK+ G ++ + E + KG + D E+ E+D++
Sbjct: 5 EELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLD--------ELFEELDKNG 56
Query: 86 DGRISYDEFRAMMK 99
DG +S++EF+ ++K
Sbjct: 57 DGEVSFEEFQVLVK 70
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 32 RFERLYKAFQHFDKDNTGYITVDELETAFK---GYNMGDDVTIAMKKEIMSEVDRDKDGR 88
R +L+ AFQ +D D G I+ E+ + G + ++ + + E D D DG
Sbjct: 112 RRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGA 171
Query: 89 ISYDEF 94
+S+ EF
Sbjct: 172 VSFVEF 177
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E+ E+D++ DG +S++EF+ ++K
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVK 71
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E+ E+D++ DG +S++EF+ ++K
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVK 71
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 14 TIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKG-YNMGDDVTIA 72
++ + +F+TA + E+L F +D + GYI +E+ K Y+M T
Sbjct: 69 SVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYP 128
Query: 73 MKKE---------IMSEVDRDKDGRISYDEF 94
+ KE ++D++KDG ++ DEF
Sbjct: 129 VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E+ E+D++ DG +S++EF+ ++K
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVK 72
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GSISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E+ E+D++ DG +S++EF+ ++K
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVK 72
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E+ E+D++ DG +S++EF+ ++K
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVK 71
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELETAFKG-YNMGDDVTIAMKKE---------IMSEVDR 83
E+L AF +D + GYIT +E+ K Y+M T + +E ++DR
Sbjct: 9 EKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDR 68
Query: 84 DKDGRISYDEF 94
++DG ++ +EF
Sbjct: 69 NQDGVVTIEEF 79
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 14 TIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKG-YNMGDDVTIA 72
++ + +F+TA + E+L F +D + GYI +E+ K Y+M T
Sbjct: 105 SVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYP 164
Query: 73 MKKE---------IMSEVDRDKDGRISYDEF 94
+ KE ++D++KDG ++ DEF
Sbjct: 165 VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGY 63
D DG+ TI E+ E K FQH D DN+G + VDE+ G+
Sbjct: 123 DKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTRQHLGF 178
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 40 FQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMK--KEIMSEVDRDKDGRISYDE 93
F FDKD +G IT+DE +K Y ++ + + ++ D D G + DE
Sbjct: 119 FDIFDKDGSGTITLDE----WKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E+ E+D++ DG +S++EF+ ++K
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVK 71
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E+ E+D++ DG +S++EF+ ++K
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVK 72
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GSISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 14 TIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKG-YNMGDDVTIA 72
++ + +F+TA + E+L F +D + GYI +E+ K Y+M T
Sbjct: 72 SVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYP 131
Query: 73 MKKE---------IMSEVDRDKDGRISYDEF 94
+ KE ++D++KDG ++ DEF
Sbjct: 132 VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELE------TAFKGYNMGDDVTIAMKKEIMSEVDRDKDG 87
++++ +FQ +D G+I E++ A G N+ D V + + E D DG
Sbjct: 91 DKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDG 150
Query: 88 RISYDEFRAMMKSGTHLQAN 107
+I +E+R+++ L N
Sbjct: 151 KIDKEEWRSLVLRHPSLLKN 170
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DEF MM
Sbjct: 34 GSISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E+ E+D++ DG +S++EF+ ++K
Sbjct: 52 ELFEELDKNGDGEVSFEEFQVLVK 75
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E+ E+D++ DG +S++EF+ ++K
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVK 72
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 34 ERLYKAFQHFDKDNTGYITVDELE------TAFKGYNMGDDVTIAMKKEIMSEVDRDKDG 87
++++ +FQ +D G+I E++ A G N+ D V + + E D DG
Sbjct: 122 DKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDG 181
Query: 88 RISYDEFRAMMKSGTHLQAN 107
+I +E+R+++ L N
Sbjct: 182 KIDKEEWRSLVLRHPSLLKN 201
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 28.9 bits (63), Expect = 0.76, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R E L+K F+ D +NTG I +D
Sbjct: 665 LVRLETLFKIFKQLDPENTGTIELD 689
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.9 bits (63), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 10 DGNRTIVYIEFITAT-------MQRHKLERFERLYKAFQHFDKDNTGYITVDELETAF-- 60
DG IV + + T + +L+ E K ++ +D D++G+I +EL+
Sbjct: 72 DGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKD 131
Query: 61 ---KGYNMGDDVTIAMKKEIMSEV-DRDKDGRISYDEFRAMMK 99
K DD +A ++M ++ D + DG++ E ++
Sbjct: 132 LLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLP 174
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 38 KAFQHFDKDNTGYITVDELETAFK 61
KAF+ +D+D GYI +EL+ K
Sbjct: 195 KAFELYDQDGNGYIDENELDALLK 218
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 28.9 bits (63), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 75 KEIMSEVDRDKDGRISYDEFRAMMKS 100
+++M + D++ DGRI +DEF MM+
Sbjct: 8 EDLMKDSDKNNDGRIDFDEFLKMMEG 33
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 81 VDRDKDGRISYDEFRAMMKSGTHLQANNN 109
+D+D++G IS DE++A KS +Q++ +
Sbjct: 118 IDKDQNGAISLDEWKAYTKSAGIIQSSED 146
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Query: 42 HFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMMK 99
K+ + E + KG DD + E+D++ DG +S++EF+ ++K
Sbjct: 25 QLSKEELKQLIQAEFPSLLKGPRTLDD--------LFQELDKNGDGEVSFEEFQVLVK 74
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R E L+K F+ D +NTG I +D
Sbjct: 668 LVRLEILFKIFKQLDPENTGTIQLD 692
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R + +++AF+ DK+ TG I V+
Sbjct: 865 LVRLDAMFRAFRSLDKNGTGQIQVN 889
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R E L+K F+ D +NTG I +D
Sbjct: 666 LVRLEILFKIFKQLDPENTGTIQLD 690
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R E L+K F+ D +NTG I +D
Sbjct: 666 LVRLEILFKIFKQLDPENTGTIQLD 690
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R E L+K F+ D +NTG I +D
Sbjct: 666 LVRLEILFKIFKQLDPENTGTIQLD 690
>pdb|3BIO|A Chain A, Crystal Structure Of Oxidoreductase (gfo/idh/moca Family
Member) From Porphyromonas Gingivalis W83
pdb|3BIO|B Chain B, Crystal Structure Of Oxidoreductase (gfo/idh/moca Family
Member) From Porphyromonas Gingivalis W83
Length = 304
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 12 NRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELET 58
+R VY+E + H LE KA ++F D T I VDE++
Sbjct: 184 HRRXVYVELLPG----HNLEEVSAAIKADEYFVHDETHVIQVDEVDA 226
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 40 FQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
+ D D GY+++ E + + +G D+T + +D +K+G+IS DEF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQA--VGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 81 VDRDKDGRISYDEFRAMMKS 100
+D DKDG +S EF+A +++
Sbjct: 111 IDTDKDGYVSLPEFKAFLQA 130
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 40 FQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
+ D D GY+++ E + + +G D+T + +D +K+G+IS DEF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQA--VGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 81 VDRDKDGRISYDEFRAMMKS 100
+D DKDG +S EF+A +++
Sbjct: 111 IDTDKDGYVSLPEFKAFLQA 130
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 76 EIMSEVDRDKDGRISYDEFRAMMK 99
E+ E+D+ DG +S++EF+ ++K
Sbjct: 48 ELFEELDKAGDGEVSFEEFQVLVK 71
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DE+ MM
Sbjct: 34 GCISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMM 81
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
G I+ EL + +G + T +E++ EVD D G + +DE+ MM
Sbjct: 34 GCISTKELGKVMR--MLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMM 81
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 60 FKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAMM 98
F+G + GD +A + + + D ++ GR+ +EFRA+
Sbjct: 16 FQGAD-GDGEELARLRSVFAACDANRSGRLEREEFRALC 53
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 31 ERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRIS 90
E RL F D + +G + +E F+ V A + + +D D+DG I+
Sbjct: 24 EELARLRSVFAACDANRSGRLEREE----FRALCTELRVRPADAEAVFQRLDADRDGAIT 79
Query: 91 YDEF 94
+ EF
Sbjct: 80 FQEF 83
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R + +++AF+ DKD TG I V+
Sbjct: 138 LVRLDAMFRAFKSLDKDGTGQIQVN 162
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R + +++AF+ DKD TG I V+
Sbjct: 149 LVRLDAMFRAFKSLDKDGTGQIQVN 173
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVDELETAFKG 62
++R++ +YK FD D +G I EL AF+
Sbjct: 87 IKRWQAIYK---QFDTDRSGTICSSELPGAFEA 116
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGY 63
D DG+ +I E+ T E K F+H D DN+G + VDE+ G+
Sbjct: 126 DKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTRQHLGF 181
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Query: 9 IDGNRTIVYIEFITAT--MQRHKLERFERLYKA---------FQHFDKDNTGYITVDELE 57
+D + + + F+ + +H L+ + + K+ F FDKD +G I++DE +
Sbjct: 80 LDYGKEVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWK 139
Query: 58 T--AFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDE 93
T G D+ ++ D D G++ DE
Sbjct: 140 TYGGISGICPSDEDA----EKTFKHCDLDNSGKLDVDE 173
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 34 ERLYKAFQHFDKDNTGYITVDEL 56
E L AF+ FDK+ GYI ++EL
Sbjct: 5 EELANAFRIFDKNADGYIDIEEL 27
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 14 TIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKG-YNMGDDVTIA 72
++ + +F+TA + E+L F +D + GYI +E+ K Y+M T
Sbjct: 69 SVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYP 128
Query: 73 MKKE---------IMSEVDRDKDGRISYDEF 94
+ E ++D++KDG ++ DEF
Sbjct: 129 VLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 81 VDRDKDGRISYDEFRAMMKSGTHLQANNN 109
VD+D++G I+ DE++A K+ +Q++ +
Sbjct: 118 VDKDQNGAITLDEWKAYTKAAGIIQSSED 146
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 81 VDRDKDGRISYDEFRAMMKSGTHLQANNN 109
VD+D++G I+ DE++A K+ +Q++ +
Sbjct: 118 VDKDQNGAITLDEWKAYTKAAGIIQSSED 146
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 17 YIEFITAT--MQRHKLERFERLYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMK 74
++EFI A + + K+E+ + Y F+ +D D G I +EL F +
Sbjct: 76 FLEFIAAVNLIMQEKMEQKLKWY--FKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSP 133
Query: 75 KE----IMSEVDRDKDGRISYDEF 94
+E + ++D + DG ++ +EF
Sbjct: 134 EEFINLVFHKIDINNDGELTLEEF 157
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 36 LYKAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEI 77
L AF FD+D G+I D L+ + NMGD+ + K+EI
Sbjct: 87 LRNAFSMFDEDGQGFIPEDYLKDLLE--NMGDNFS---KEEI 123
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 32 RFERLYKAFQHFDKDNTGYITVDELETAFK--GYNMGDDVTIAMKKEIMSEV 81
+ + L +AF D+D G+I +++L+ F G DD AM KE ++
Sbjct: 14 QMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQL 65
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 8 DIDGNRTIVYIEFITATMQRHKLERFERLYKAFQHFDKDNTGYIT 52
DI+ I Y EF+ + +E L AF DKD GYI+
Sbjct: 83 DINDRGNITYTEFMAGCYRWKNIES-TFLKAAFNKIDKDEDGYIS 126
>pdb|1A4P|A Chain A, P11 (s100a10), Ligand Of Annexin Ii
pdb|1A4P|B Chain B, P11 (s100a10), Ligand Of Annexin Ii
pdb|1BT6|A Chain A, P11 (S100a10), Ligand Of Annexin Ii In Complex With
Annexin Ii N-Terminus
pdb|1BT6|B Chain B, P11 (S100a10), Ligand Of Annexin Ii In Complex With
Annexin Ii N-Terminus
pdb|4FTG|A Chain A, The Crystal Structure Of An Ahnak Peptide In Complex With
The S100a10/anxa2 Heterotetramer
pdb|4FTG|B Chain B, The Crystal Structure Of An Ahnak Peptide In Complex With
The S100a10/anxa2 Heterotetramer
Length = 96
Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 17/64 (26%)
Query: 61 KGYNMGDDVTIAMKKE----------------IMSEVDRDKDGRISYDEFRAMMKSGTHL 104
KGY +D+ + M+KE IM ++D+ +DG++ + F +++ +G +
Sbjct: 22 KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLI-AGLTI 80
Query: 105 QANN 108
N+
Sbjct: 81 ACND 84
>pdb|4DRW|A Chain A, Crystal Structure Of The Ternary Complex Between S100a10,
An Annexin A2 N-Terminal Peptide And An Ahnak Peptide
pdb|4DRW|B Chain B, Crystal Structure Of The Ternary Complex Between S100a10,
An Annexin A2 N-Terminal Peptide And An Ahnak Peptide
pdb|4DRW|C Chain C, Crystal Structure Of The Ternary Complex Between S100a10,
An Annexin A2 N-Terminal Peptide And An Ahnak Peptide
pdb|4DRW|D Chain D, Crystal Structure Of The Ternary Complex Between S100a10,
An Annexin A2 N-Terminal Peptide And An Ahnak Peptide
Length = 121
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 17/64 (26%)
Query: 61 KGYNMGDDVTIAMKKE----------------IMSEVDRDKDGRISYDEFRAMMKSGTHL 104
KGY +D+ + M+KE IM ++D+ +DG++ + F +++ +G +
Sbjct: 28 KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLI-AGLTI 86
Query: 105 QANN 108
N+
Sbjct: 87 ACND 90
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R + +++AF+ DK+ TG I V+
Sbjct: 138 LVRLDAMFRAFRSLDKNGTGQIQVN 162
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R + +++AF+ DK+ TG I V+
Sbjct: 149 LVRLDAMFRAFRSLDKNGTGQIQVN 173
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 30 LERFERLYKAFQHFDKDNTGYITVD 54
L R + +++AF+ DK+ TG I V+
Sbjct: 149 LVRLDAMFRAFRSLDKNGTGQIQVN 173
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 40 FQHFDKDNTGYITVDELETAF-KGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEFRAM 97
F DKD + + + E + A K G D+T A + +E+D + G +++DEF
Sbjct: 139 FDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATT--VFNEIDTNGSGVVTFDEFSCW 195
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 38 KAFQHFDKDNTGYITVDELETAFKGYNMGDDVTIAMKKEIMSEVD--RDKDGRISYDEFR 95
+AF+ FD++ G I+ E+ K +G+ +T +I + D D DG I Y++
Sbjct: 89 EAFKTFDREGQGLISSAEIRNVLK--MLGERITEDQCNDIFTFCDIREDIDGNIKYEDLM 146
Query: 96 AMMKSGT 102
+ +G
Sbjct: 147 KKVMAGP 153
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 49 GYITVDELETAFKGYNMGDDVTIAMKKEIMSEVDRDKDGRISYDEF 94
G I+ EL + +G + T +E + EVD D G + +DEF
Sbjct: 34 GCISTKELGKVXR--XLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 73 MKKEIMSEVDRDKDGRISYDEFRAMMKS 100
M + + ++D + DG +SY+E +A + S
Sbjct: 1 MAEALFKQLDANGDGSVSYEEVKAFVSS 28
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 73 MKKEIMSEVDRDKDGRISYDEFRAMM 98
M + + E+D + DG +SY+E +A +
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEVKAFV 26
>pdb|1KQF|A Chain A, Formate Dehydrogenase N From E. Coli
pdb|1KQG|A Chain A, Formate Dehydrogenase N From E. Coli
Length = 1015
Score = 25.4 bits (54), Expect = 9.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 50 YITVDELETAFKGYNMGDDVTIAMKKEIMSEV 81
++ + E A KG N GD VT++ K+ + V
Sbjct: 919 FVEISETLAAAKGINNGDRVTVSSKRGFIRAV 950
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 25.0 bits (53), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 21 ITATMQRHKLERFERLYKAFQHFDKDNTGYITVDELETAF 60
+ A +H+++ F+ +AFQ D+D G+I+ +++ F
Sbjct: 47 VFAMFTQHQVQEFK---EAFQLIDQDKDGFISKNDIRATF 83
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,425,925
Number of Sequences: 62578
Number of extensions: 136814
Number of successful extensions: 1341
Number of sequences better than 100.0: 302
Number of HSP's better than 100.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 459
Number of HSP's gapped (non-prelim): 611
length of query: 114
length of database: 14,973,337
effective HSP length: 77
effective length of query: 37
effective length of database: 10,154,831
effective search space: 375728747
effective search space used: 375728747
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)