BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048409
(408 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q10469|MGAT2_HUMAN Alpha-1,6-mannosyl-glycoprotein
2-beta-N-acetylglucosaminyltransferase OS=Homo sapiens
GN=MGAT2 PE=1 SV=1
Length = 447
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 167/342 (48%), Gaps = 36/342 (10%)
Query: 88 RNVDLFPNLAKDHIVIVLYVHNRPQYLKVVVESLSSVVGIKETLLIVSHDGYFEEMNKIV 147
RNVD A +V+V+ VHNRP+YL+++++SL GI L+I SHD + E+N+++
Sbjct: 105 RNVDKAGTWAPRELVLVVQVHNRPEYLRLLLDSLRKAQGIDNVLVIFSHDFWSTEINQLI 164
Query: 148 DGIKFCQVKQIYAPYSPHLFSDGFPGVSSNDCK---DKDNATEKHCTGT--PDQYGNHRS 202
G+ FC V Q++ P+S L+ + FPG DC K+ A + C PD +G++R
Sbjct: 165 AGVNFCPVLQVFFPFSIQLYPNEFPGSDPRDCPRDLPKNAALKLGCINAEYPDSFGHYRE 224
Query: 203 SKIVSLKHHWWWMMNTVWDGLEETRGHTGHILFIEEDHFILPNAYRNLQILTELKPKKCP 262
+K KHHWWW ++ VW+ ++ R + G ILF+EEDH++ P+ Y + + +LK ++CP
Sbjct: 225 AKFSQTKHHWWWKLHFVWERVKILRDYAGLILFLEEDHYLAPDFYHVFKKMWKLKQQECP 284
Query: 263 DCYAANLAPSDVNSRGEGGSILIAERM-----GNVGYTFNRTVWRKIHRKARKFCFFDDY 317
+C +L + G + + + N+G R ++K+ FC +DDY
Sbjct: 285 ECDVLSLGTYSASRSFYGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDY 344
Query: 318 NWDITM-----------WATGQGDSGACIDNGVVGIR----VEDSDKVANIKSEWN---V 359
NWD T+ W G G+ S + A I+S N
Sbjct: 345 NWDWTLQYLTVSCLPKFWKVLVPQIPRIFHAGDCGMHHKKTCRPSTQSAQIESLLNNNKQ 404
Query: 360 RVFKHQQGYKAGF--------RGWGGWGDDRDRRLCLAFARM 393
+F F R GGWGD RD LC ++ R+
Sbjct: 405 YMFPETLTISEKFTVVAISPPRKNGGWGDIRDHELCKSYRRL 446
>sp|O19071|MGAT2_PIG Alpha-1,6-mannosyl-glycoprotein
2-beta-N-acetylglucosaminyltransferase OS=Sus scrofa
GN=MGAT2 PE=3 SV=1
Length = 446
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 168/343 (48%), Gaps = 39/343 (11%)
Query: 88 RNVDLFPNLAKDHIVIVLYVHNRPQYLKVVVESLSSVVGIKETLLIVSHDGYFEEMNKIV 147
RNVD + +V+V+ VHNR +YLK++++SL GI L+I SHD + E+N+++
Sbjct: 105 RNVDKVSSWVPRELVLVVQVHNRAEYLKLLLDSLRKAQGIDNVLVIFSHDFWSTEINQLI 164
Query: 148 DGIKFCQVKQIYAPYSPHLFSDGFPGVSSNDCK---DKDNATEKHCTGT--PDQYGNHRS 202
G+ FC V Q++ P+S L+ + FPG DC +K+ A + C PD +G++R
Sbjct: 165 AGVDFCPVLQVFFPFSIQLYPNEFPGTDPRDCPRDLEKNAALKMGCINAEYPDSFGHYRE 224
Query: 203 SKIVSLKHHWWWMMNTVWDGLEETRGHTGHILFIEEDHFILPNAYRNLQILTELKPKKCP 262
+K KHHWWW ++ VW+ ++ R + G ILF+EEDH++ P+ Y + + LK ++CP
Sbjct: 225 AKFSQTKHHWWWKLHFVWERVKVLRDYAGLILFLEEDHYVAPDFYHVFKKMWNLKQQECP 284
Query: 263 DC-------YAANLAPSDVNSRGEGGSILIAERMGNVGYTFNRTVWRKIHRKARKFCFFD 315
+C Y + DV + + + E N+G R ++K+ FC +D
Sbjct: 285 ECDVLSLGTYTTVRSFRDVADKVDVKTWKSTEH--NMGLALTRDAYQKLIECTDTFCTYD 342
Query: 316 DYNWDITM-----------WATGQGDSGACIDNGVVGIR----VEDSDKVANIKSEWN-- 358
DYNWD T+ W G G+ S + A I+S N
Sbjct: 343 DYNWDWTLQYLTVSCLPKFWKVLVPQVPRIFHAGDCGMHHKKTCRPSTQSAQIESLLNSN 402
Query: 359 --------VRVFKHQQGYKAGFRGWGGWGDDRDRRLCLAFARM 393
+ + + + R GGWGD RD LC ++ R+
Sbjct: 403 KQYMFPETLTISEKLTAALSPPRKNGGWGDIRDHELCKSYRRL 445
>sp|Q09326|MGAT2_RAT Alpha-1,6-mannosyl-glycoprotein
2-beta-N-acetylglucosaminyltransferase OS=Rattus
norvegicus GN=Mgat2 PE=1 SV=1
Length = 442
Score = 178 bits (452), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 171/350 (48%), Gaps = 52/350 (14%)
Query: 88 RNVDLFPNLAKDHIVIVLYVHNRPQYLKVVVESLSSVVGIKETLLIVSHDGYFEEMNKIV 147
RNVD + +V+V+ VHNRP+YL+++++SL GI+E L+I SHD + E+N ++
Sbjct: 100 RNVDKDGTWSPGELVLVVQVHNRPEYLRLLIDSLRKAQGIREVLVIFSHDFWSAEINSLI 159
Query: 148 DGIKFCQVKQIYAPYSPHLFSDGFPGVSSNDCK---DKDNATEKHCTGT--PDQYGNHRS 202
+ FC V Q++ P+S L+ FPG DC K+ A + C PD +G++R
Sbjct: 160 SSVDFCPVLQVFFPFSIQLYPSEFPGSDPRDCPRDLKKNAALKLGCINAEYPDSFGHYRE 219
Query: 203 SKIVSLKHHWWWMMNTVWDGLEETRGHTGHILFIEEDHFILPNAYRNLQILTELKPKKCP 262
+K KHHWWW ++ VW+ ++ + +TG ILF+EEDH++ P+ Y + + +LK ++CP
Sbjct: 220 AKFSQTKHHWWWKLHFVWERVKVLQDYTGLILFLEEDHYLAPDFYHVFKKMWKLKQQECP 279
Query: 263 DCYAANLAPSDVNSRGEGGSIL----IAERMG---------NVGYTFNRTVWRKIHRKAR 309
C DV S G +I IA+++ N+G R ++K+
Sbjct: 280 GC--------DVLSLGTYTTIRSFYGIADKVDVKTWKSTEHNMGLALTRDAYQKLIECTD 331
Query: 310 KFCFFDDYNWDITM-----------WATGQGDSGACIDNGVVGIR----VEDSDKVANIK 354
FC +DDYNWD T+ W + G G+ S + A I+
Sbjct: 332 TFCTYDDYNWDWTLQYLTLACLPKVWKVLVPQAPRIFHAGDCGMHHKKTCRPSTQSAQIE 391
Query: 355 SEWN-----------VRVFKHQQGYKAGFRGWGGWGDDRDRRLCLAFARM 393
S N V K + R GGWGD RD LC ++ R+
Sbjct: 392 SLLNNNKQYLFPETLVIGEKFPMAAISPPRKNGGWGDIRDHELCKSYRRL 441
>sp|Q921V5|MGAT2_MOUSE Alpha-1,6-mannosyl-glycoprotein
2-beta-N-acetylglucosaminyltransferase OS=Mus musculus
GN=Mgat2 PE=2 SV=1
Length = 442
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 171/350 (48%), Gaps = 52/350 (14%)
Query: 88 RNVDLFPNLAKDHIVIVLYVHNRPQYLKVVVESLSSVVGIKETLLIVSHDGYFEEMNKIV 147
RNV + +V+V+ VHNRP+YL+++++SL GI+E L+I SHD + E+N ++
Sbjct: 100 RNVGNDGTWSPGELVLVVQVHNRPEYLRLLIDSLRKAQGIQEVLVIFSHDFWSAEINSLI 159
Query: 148 DGIKFCQVKQIYAPYSPHLFSDGFPGVSSNDCK---DKDNATEKHCTGT--PDQYGNHRS 202
+ FC V Q++ P+S L+ + FPG DC K+ A + C PD +G++R
Sbjct: 160 SRVDFCPVLQVFFPFSIQLYPNEFPGSDPRDCPRDLKKNAALKLGCINAEYPDSFGHYRE 219
Query: 203 SKIVSLKHHWWWMMNTVWDGLEETRGHTGHILFIEEDHFILPNAYRNLQILTELKPKKCP 262
+K KHHWWW ++ VW+ ++ + +TG ILF+EEDH++ P+ Y + + +LK ++CP
Sbjct: 220 AKFSQTKHHWWWKLHFVWERVKVLQDYTGLILFLEEDHYLAPDFYHVFKKMWKLKQQECP 279
Query: 263 DCYAANLAPSDVNSRGEGGSIL----IAERMG---------NVGYTFNRTVWRKIHRKAR 309
C DV S G +I IA+++ N+G R ++K+
Sbjct: 280 GC--------DVLSLGTYTTIRSFYGIADKVDVKTWKSTEHNMGLALTRDAYQKLIECTD 331
Query: 310 KFCFFDDYNWDITM-----------WATGQGDSGACIDNGVVGIR----VEDSDKVANIK 354
FC +DDYNWD T+ W + G G+ S + A I+
Sbjct: 332 TFCTYDDYNWDWTLQYLTLACLPKIWKVLVPQAPRIFHAGDCGMHHKKTCRPSTQSAQIE 391
Query: 355 SEWN-----------VRVFKHQQGYKAGFRGWGGWGDDRDRRLCLAFARM 393
S N V K + R GGWGD RD LC ++ R+
Sbjct: 392 SLLNSNKQYLFPETLVIGEKFPMAAISPPRKNGGWGDIRDHELCKSYRRL 441
>sp|Q5RCB9|PMGT1_PONAB Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
OS=Pongo abelii GN=POMGNT1 PE=2 SV=1
Length = 660
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 87 PRNVDLFPNLAKDHIV----IVLYVHNRPQYLKVVVESLSSVVGIKETLLIVSHDGYFEE 142
P ++ P+ D+ V + + NRP YL ++ SL S G+ ++ V DGY+EE
Sbjct: 284 PTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEE 343
Query: 143 MNKIVD------------GIKFCQVKQIY 159
+V GIK +V Q Y
Sbjct: 344 PMDVVALFGLRGIQHTPIGIKNARVSQHY 372
>sp|Q5EAB6|PMGT1_BOVIN Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
OS=Bos taurus GN=POMGNT1 PE=2 SV=1
Length = 660
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 87 PRNVDLFPNLAKDHIV----IVLYVHNRPQYLKVVVESLSSVVGIKETLLIVSHDGYFEE 142
P ++ P+ D+ V + + NRP YL ++ SL S G+ ++ V DGY+EE
Sbjct: 284 PTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEE 343
Query: 143 MNKIV 147
+V
Sbjct: 344 PMDVV 348
>sp|Q5XIN7|PMGT1_RAT Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
OS=Rattus norvegicus GN=Pomgnt1 PE=2 SV=1
Length = 660
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 87 PRNVDLFPNLAKDHIV----IVLYVHNRPQYLKVVVESLSSVVGIKETLLIVSHDGYFEE 142
P ++ P+ D+ V + + NRP YL ++ SL S G+ ++ V DGY+EE
Sbjct: 284 PTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEE 343
Query: 143 MNKIV 147
+V
Sbjct: 344 PMDVV 348
>sp|Q8WZA1|PMGT1_HUMAN Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
OS=Homo sapiens GN=POMGNT1 PE=1 SV=2
Length = 660
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 87 PRNVDLFPNLAKDHIV----IVLYVHNRPQYLKVVVESLSSVVGIKETLLIVSHDGYFEE 142
P ++ P+ D+ V + + NRP YL ++ SL S G+ ++ V DGY+EE
Sbjct: 284 PTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEE 343
Query: 143 MNKIV 147
+V
Sbjct: 344 PMDVV 348
>sp|Q91X88|PMGT1_MOUSE Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
OS=Mus musculus GN=Pomgnt1 PE=2 SV=1
Length = 660
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 87 PRNVDLFPNLAKDHIV----IVLYVHNRPQYLKVVVESLSSVVGIKETLLIVSHDGYFEE 142
P ++ P+ D+ V + + NRP YL ++ SL S G+ ++ V DGY+EE
Sbjct: 284 PTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEE 343
Query: 143 MNKIV 147
+V
Sbjct: 344 PMDVV 348
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 157,849,312
Number of Sequences: 539616
Number of extensions: 6837852
Number of successful extensions: 14413
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 14392
Number of HSP's gapped (non-prelim): 15
length of query: 408
length of database: 191,569,459
effective HSP length: 120
effective length of query: 288
effective length of database: 126,815,539
effective search space: 36522875232
effective search space used: 36522875232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)