Query 048410
Match_columns 151
No_of_seqs 112 out of 2353
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 16:03:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048410hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 4.3E-33 1.5E-37 171.8 12.8 140 2-147 5-148 (169)
2 4b93_B Ankyrin repeat domain-c 100.0 1.3E-31 4.5E-36 176.3 9.9 142 2-149 87-232 (269)
3 1awc_B Protein (GA binding pro 100.0 2.1E-30 7.3E-35 157.3 11.4 139 2-147 3-145 (153)
4 3v30_A DNA-binding protein rfx 100.0 7.6E-30 2.6E-34 157.6 12.5 140 3-147 4-147 (172)
5 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.2E-29 7.6E-34 155.2 13.7 140 2-147 15-158 (169)
6 3v31_A Ankyrin repeat family A 100.0 9.6E-30 3.3E-34 156.4 12.0 140 2-147 4-147 (167)
7 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.4E-30 1.9E-34 156.7 10.7 140 2-147 6-149 (162)
8 3twr_A Tankyrase-2; ankyrin re 100.0 3.5E-29 1.2E-33 153.6 12.9 138 2-144 9-150 (165)
9 2rfm_A Putative ankyrin repeat 100.0 1.3E-29 4.6E-34 159.0 11.1 140 2-147 36-179 (192)
10 3f6q_A Integrin-linked protein 100.0 6.5E-29 2.2E-33 154.4 13.1 139 2-145 6-148 (179)
11 1bd8_A P19INK4D CDK4/6 inhibit 100.0 7.9E-29 2.7E-33 150.7 12.2 139 2-147 3-145 (156)
12 2dzn_A Probable 26S proteasome 100.0 1.6E-28 5.5E-33 157.6 13.3 138 3-145 74-218 (228)
13 2rfa_A Transient receptor pote 100.0 1.6E-28 5.5E-33 158.1 12.9 141 2-147 4-166 (232)
14 4hbd_A KN motif and ankyrin re 100.0 5.4E-29 1.9E-33 164.4 10.4 142 2-147 112-262 (276)
15 3hra_A Ankyrin repeat family p 100.0 2.3E-28 7.9E-33 154.2 12.2 139 3-146 41-189 (201)
16 2f8y_A Notch homolog 1, transl 100.0 2.6E-28 9E-33 156.2 12.6 138 3-145 27-168 (223)
17 2dzn_A Probable 26S proteasome 100.0 4.8E-28 1.6E-32 155.4 13.7 139 3-145 4-150 (228)
18 4gpm_A Engineered protein OR26 100.0 5.6E-28 1.9E-32 148.9 12.8 124 2-131 38-165 (169)
19 3hra_A Ankyrin repeat family p 100.0 6.7E-28 2.3E-32 152.1 13.4 143 2-147 6-152 (201)
20 2xai_A ASB-9, ankyrin repeat a 100.0 2.7E-28 9.3E-33 159.8 11.9 138 3-148 71-212 (261)
21 1yyh_A HN1;, notch 1, ankyrin 100.0 1.9E-28 6.6E-33 159.8 11.1 137 3-144 59-199 (253)
22 1ikn_D Protein (I-kappa-B-alph 100.0 2.9E-28 1E-32 157.3 11.4 141 2-147 46-196 (236)
23 2vge_A RELA-associated inhibit 100.0 1.4E-27 4.7E-32 153.8 14.5 139 3-146 23-199 (229)
24 3aji_A 26S proteasome non-ATPa 100.0 7.2E-28 2.5E-32 154.9 12.8 136 3-144 42-181 (231)
25 1yyh_A HN1;, notch 1, ankyrin 100.0 2.9E-28 1E-32 158.9 11.1 141 2-147 91-235 (253)
26 3t8k_A Uncharacterized protein 100.0 1.9E-28 6.3E-33 153.2 9.7 139 3-147 8-166 (186)
27 2rfa_A Transient receptor pote 100.0 1.5E-27 5.1E-32 153.5 14.1 143 2-147 38-209 (232)
28 3aji_A 26S proteasome non-ATPa 100.0 1.2E-27 4.3E-32 153.8 13.3 141 2-147 7-151 (231)
29 1oy3_D Transcription factor in 100.0 5.1E-28 1.7E-32 159.5 11.7 78 67-146 154-236 (282)
30 2f8y_A Notch homolog 1, transl 100.0 1.3E-27 4.4E-32 153.0 13.1 141 2-147 59-203 (223)
31 3b7b_A Euchromatic histone-lys 100.0 1.2E-27 4.2E-32 154.3 12.8 140 3-147 79-222 (237)
32 2etb_A Transient receptor pote 100.0 1.8E-28 6.3E-33 160.0 8.8 143 2-147 44-233 (256)
33 1bi7_B P16INK4A, MTS1, multipl 100.0 3E-28 1E-32 148.4 8.9 136 2-144 13-153 (156)
34 2xai_A ASB-9, ankyrin repeat a 100.0 1.5E-27 5E-32 156.3 12.5 138 2-146 4-145 (261)
35 1sw6_A Regulatory protein SWI6 99.9 6.4E-28 2.2E-32 162.7 9.6 140 2-146 132-327 (327)
36 3d9h_A CDNA FLJ77766, highly s 99.9 1.5E-27 5.1E-32 158.1 11.1 137 3-147 127-267 (285)
37 3b7b_A Euchromatic histone-lys 99.9 4.4E-27 1.5E-31 151.7 12.6 137 4-145 47-187 (237)
38 1s70_B 130 kDa myosin-binding 99.9 5.7E-27 2E-31 155.8 13.4 90 3-96 42-131 (299)
39 1s70_B 130 kDa myosin-binding 99.9 6.7E-27 2.3E-31 155.5 13.5 138 2-144 74-274 (299)
40 1k1a_A B-cell lymphoma 3-encod 99.9 9.1E-27 3.1E-31 150.5 13.4 138 3-145 81-226 (241)
41 3d9h_A CDNA FLJ77766, highly s 99.9 6.5E-27 2.2E-31 155.1 12.7 138 2-146 60-201 (285)
42 1k1a_A B-cell lymphoma 3-encod 99.9 9.8E-27 3.3E-31 150.3 12.8 139 3-146 48-194 (241)
43 1oy3_D Transcription factor in 99.9 5.1E-27 1.7E-31 154.7 11.4 110 36-147 157-270 (282)
44 3kea_A K1L; tropism, ANK repea 99.9 3.8E-27 1.3E-31 156.2 10.4 136 2-146 32-172 (285)
45 3jxi_A Vanilloid receptor-rela 99.9 1.9E-27 6.4E-32 155.5 8.2 143 2-147 47-237 (260)
46 2etb_A Transient receptor pote 99.9 3.1E-27 1E-31 154.2 9.0 140 2-144 3-181 (256)
47 1wdy_A 2-5A-dependent ribonucl 99.9 2.8E-26 9.4E-31 151.2 13.3 138 3-145 41-192 (285)
48 2pnn_A Transient receptor pote 99.9 5.1E-27 1.7E-31 154.5 9.5 143 2-147 55-245 (273)
49 3ljn_A Hypothetical protein; a 99.9 2.9E-26 9.8E-31 156.4 13.5 141 3-147 86-256 (364)
50 3ljn_A Hypothetical protein; a 99.9 1.8E-26 6.1E-31 157.4 12.1 139 3-146 22-222 (364)
51 1n11_A Ankyrin; clathrin, BAND 99.9 1.8E-26 6.3E-31 160.6 12.4 138 3-146 247-388 (437)
52 1wdy_A 2-5A-dependent ribonucl 99.9 2.8E-26 9.7E-31 151.1 12.6 141 2-147 6-160 (285)
53 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.2E-27 1.4E-31 152.4 8.5 134 2-142 6-144 (239)
54 1n11_A Ankyrin; clathrin, BAND 99.9 2.4E-26 8.3E-31 160.0 12.6 140 2-147 15-158 (437)
55 3v30_A DNA-binding protein rfx 99.9 2E-26 6.8E-31 142.2 10.5 131 2-138 37-171 (172)
56 2jab_A H10-2-G3; HER2, darpin, 99.9 8.9E-26 3E-30 134.4 12.4 116 2-122 15-134 (136)
57 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-26 4.4E-31 150.1 8.9 143 2-150 38-196 (239)
58 4b93_B Ankyrin repeat domain-c 99.9 8.4E-27 2.9E-31 153.4 8.1 139 3-147 54-197 (269)
59 2fo1_E LIN-12 protein; beta-ba 99.9 2.3E-26 8E-31 157.5 10.4 108 37-146 235-357 (373)
60 3eu9_A Huntingtin-interacting 99.9 7.1E-26 2.4E-30 146.0 12.0 140 3-147 11-154 (240)
61 3kea_A K1L; tropism, ANK repea 99.9 6.5E-27 2.2E-31 155.1 6.9 138 2-147 63-207 (285)
62 1d9s_A Cyclin-dependent kinase 99.9 2.7E-26 9.1E-31 136.7 8.9 116 2-123 13-133 (136)
63 4g8k_A 2-5A-dependent ribonucl 99.9 1.2E-25 4E-30 152.0 13.0 137 2-141 26-208 (337)
64 3utm_A Tankyrase-1; tankyrase, 99.9 1.1E-25 3.7E-30 152.3 12.8 91 2-96 59-149 (351)
65 3twr_A Tankyrase-2; ankyrin re 99.9 5.2E-25 1.8E-29 135.0 13.9 116 2-122 43-161 (165)
66 3jxi_A Vanilloid receptor-rela 99.9 1.7E-26 5.7E-31 151.0 7.1 144 3-147 7-188 (260)
67 1ikn_D Protein (I-kappa-B-alph 99.9 9.9E-25 3.4E-29 140.8 15.3 141 2-147 79-231 (236)
68 2b0o_E UPLC1; arfgap, structur 99.9 1.2E-25 4.2E-30 149.9 10.9 134 3-147 153-298 (301)
69 3f6q_A Integrin-linked protein 99.9 8E-25 2.7E-29 135.9 13.8 127 2-134 40-170 (179)
70 3eu9_A Huntingtin-interacting 99.9 1.3E-25 4.6E-30 144.7 10.5 105 3-111 44-148 (240)
71 3aaa_C Myotrophin, protein V-1 99.9 6.3E-25 2.2E-29 128.6 11.9 111 2-117 8-119 (123)
72 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.2E-24 4E-29 127.6 12.7 117 2-123 3-123 (126)
73 2fo1_E LIN-12 protein; beta-ba 99.9 3E-25 1E-29 152.0 11.5 141 2-147 167-325 (373)
74 1awc_B Protein (GA binding pro 99.9 1E-24 3.6E-29 132.2 11.6 114 2-120 35-152 (153)
75 3utm_A Tankyrase-1; tankyrase, 99.9 1.3E-24 4.4E-29 147.0 12.5 138 2-144 25-166 (351)
76 2y1l_E Darpin-8.4; hydrolase-i 99.9 3E-24 1E-28 132.2 12.3 116 2-122 48-167 (169)
77 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.4E-24 4.7E-29 132.6 10.7 119 2-126 39-161 (162)
78 3c5r_A BARD-1, BRCA1-associate 99.9 7.6E-25 2.6E-29 130.5 9.2 105 2-111 11-115 (137)
79 2rfm_A Putative ankyrin repeat 99.9 1.9E-24 6.5E-29 135.5 11.2 117 2-123 69-189 (192)
80 2pnn_A Transient receptor pote 99.9 1.5E-24 5.1E-29 142.7 11.2 136 2-140 102-272 (273)
81 3v31_A Ankyrin repeat family A 99.9 5.6E-24 1.9E-28 130.6 12.7 117 2-123 37-157 (167)
82 4g8k_A 2-5A-dependent ribonucl 99.9 2.5E-24 8.6E-29 145.4 11.9 144 2-147 126-285 (337)
83 3ehr_A Osteoclast-stimulating 99.9 9.3E-25 3.2E-29 139.8 8.9 128 2-135 74-206 (222)
84 3jue_A Arfgap with coiled-coil 99.9 6.6E-24 2.3E-28 144.8 11.6 141 3-146 201-348 (368)
85 3c5r_A BARD-1, BRCA1-associate 99.9 6.5E-24 2.2E-28 126.4 10.0 107 36-145 9-119 (137)
86 1dcq_A PYK2-associated protein 99.9 4.6E-23 1.6E-27 136.1 13.9 133 3-146 132-274 (278)
87 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-23 5.5E-28 127.2 10.7 114 2-122 37-154 (156)
88 2vge_A RELA-associated inhibit 99.9 6.9E-24 2.4E-28 136.5 9.4 126 17-145 1-133 (229)
89 4hbd_A KN motif and ankyrin re 99.9 2.2E-24 7.5E-29 142.3 6.5 141 3-147 78-228 (276)
90 3lvq_E ARF-GAP with SH3 domain 99.9 2.8E-23 9.6E-28 146.9 12.5 129 3-134 134-272 (497)
91 3aaa_C Myotrophin, protein V-1 99.9 1.6E-23 5.6E-28 122.5 9.4 105 37-144 7-115 (123)
92 3deo_A Signal recognition part 99.9 3.6E-23 1.2E-27 128.9 10.6 104 2-111 45-149 (183)
93 2jab_A H10-2-G3; HER2, darpin, 99.9 1.6E-23 5.3E-28 124.7 8.4 108 37-147 14-125 (136)
94 1d9s_A Cyclin-dependent kinase 99.9 5.3E-24 1.8E-28 126.7 6.1 108 36-147 11-123 (136)
95 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.3E-22 4.6E-27 113.1 10.6 91 2-96 3-93 (93)
96 3ui2_A Signal recognition part 99.9 1E-22 3.5E-27 132.2 10.5 104 2-111 46-150 (244)
97 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.6E-22 5.5E-27 118.4 10.1 108 37-147 2-113 (126)
98 3t8k_A Uncharacterized protein 99.9 1.3E-23 4.5E-28 131.2 4.8 116 2-122 39-175 (186)
99 1bi7_B P16INK4A, MTS1, multipl 99.9 7.7E-23 2.6E-27 124.3 6.3 108 36-147 11-123 (156)
100 3deo_A Signal recognition part 99.9 1.2E-22 4E-27 126.6 7.1 105 37-145 44-153 (183)
101 2l6b_A NR1C; ankyrin, consensu 99.9 1.9E-22 6.4E-27 116.7 7.5 99 37-138 9-111 (115)
102 3ehr_A Osteoclast-stimulating 99.9 3.6E-22 1.2E-26 127.7 9.4 106 37-145 73-183 (222)
103 1sw6_A Regulatory protein SWI6 99.9 8.1E-23 2.8E-27 137.8 4.6 116 5-123 101-227 (327)
104 2aja_A Ankyrin repeat family p 99.9 8.5E-24 2.9E-28 144.7 -0.7 136 2-147 93-237 (376)
105 3ui2_A Signal recognition part 99.9 5.3E-22 1.8E-26 128.8 6.5 105 37-145 45-154 (244)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.5E-21 1.9E-25 106.5 9.8 87 37-126 2-92 (93)
107 2l6b_A NR1C; ankyrin, consensu 99.9 4.2E-21 1.4E-25 111.0 8.7 103 2-109 10-112 (115)
108 3jue_A Arfgap with coiled-coil 99.8 1.5E-19 5.3E-24 123.3 9.4 108 37-147 199-313 (368)
109 3lvq_E ARF-GAP with SH3 domain 99.8 4.3E-19 1.5E-23 125.6 11.2 107 38-147 133-252 (497)
110 2aja_A Ankyrin repeat family p 99.8 2E-21 6.9E-26 133.0 -0.7 128 3-146 130-265 (376)
111 2zgd_A 3 repeat synthetic anky 99.8 9.6E-19 3.3E-23 100.3 10.3 84 3-90 26-109 (110)
112 2b0o_E UPLC1; arfgap, structur 99.8 4.8E-19 1.6E-23 118.1 10.2 108 38-147 152-271 (301)
113 1dcq_A PYK2-associated protein 99.8 4.8E-19 1.6E-23 116.9 9.7 107 39-147 132-250 (278)
114 2zgd_A 3 repeat synthetic anky 99.8 5.4E-18 1.8E-22 97.2 7.9 83 36-120 23-109 (110)
115 1gp8_A Protein (scaffolding pr 80.8 1.6 5.4E-05 19.2 2.2 18 4-21 16-33 (40)
116 3zrh_A Ubiquitin thioesterase 44.9 80 0.0027 22.3 5.9 51 8-58 29-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.3e-33 Score=171.78 Aligned_cols=140 Identities=26% Similarity=0.324 Sum_probs=128.1
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.+.|+.|++.|+.++|+.|++.|+++ +.++. .|.|||++|+..++.+++++|++.++++ +.+|..|.||||+|+..
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~--~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADV-NASDS--DGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC--CCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHc
Confidence 46799999999999999999999987 55554 4999999999999999999999999988 67899999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
|+.+++++|++.|++ ++.++..|+|||++ ++.++++.|+. .|++++.+|..|.||||+|+++..
T Consensus 81 g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~g~ 148 (169)
T 4gpm_A 81 GHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLIS-KGADVNTSDSDGRTPLDLAREHGN 148 (169)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCC
Confidence 999999999999999 99999999999998 99999966665 689999999999999999998754
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.3e-31 Score=176.28 Aligned_cols=142 Identities=21% Similarity=0.229 Sum_probs=129.1
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||+|+..|+.++|++|++.++++ ...+. .|.||+++|+..++.++++.|++.++++ +..|..|.||||+|+..
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~--~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGANA-GARNA--DQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSG 162 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCT--TCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHT
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCc-CccCC--CCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHC
Confidence 48999999999999999999999886 44443 4899999999999999999999999988 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCCCc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSPIF 149 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 149 (151)
|+.+++++|++.|++ ++..+..|.||||+ ++.++++.|+. .|++++.+|..|.||||+|++++++.
T Consensus 163 g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~~~i~ 232 (269)
T 4b93_B 163 GHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLL-HGASVQVLNKRQRTAVDCAEQNSKIM 232 (269)
T ss_dssp TCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCSGGGSCTTCHHH
T ss_pred CCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHhCCcHH
Confidence 999999999999999 99999999999998 99999966665 68999999999999999999887643
No 3
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2.1e-30 Score=157.32 Aligned_cols=139 Identities=21% Similarity=0.286 Sum_probs=126.1
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
+++|+.|++.|+.+++++|++.++... .+ ..|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT--TD--WLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC--CC--TTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC--cC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 589999999999999999999998653 23 24899999999999999999999999887 67789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
++.+++++|++.|++ ++..+..|.|||++ ++.+++++|+. .|++++.++..|.||+|+|+++..
T Consensus 78 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 78 GHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIK-YGADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp TCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred ChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCC
Confidence 999999999999999 99999999999998 89999966666 589999999999999999998764
No 4
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=7.6e-30 Score=157.57 Aligned_cols=140 Identities=20% Similarity=0.174 Sum_probs=127.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
+|||.|+..|+.+.++++++.++...+..+. .|.||||+|+..|+.+++++|++.++++ +..+..|.||||+|+..+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDE--RGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGG 80 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCT--TSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCC
Confidence 6899999999999999999999886566664 4999999999999999999999999887 677899999999999999
Q ss_pred CHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 83 HTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
+.+++++|++.|++ ++..+..|.|||++ ++.+++++|+. .|++++.++..|.||+|+|+++..
T Consensus 81 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 81 YTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLA-RGADLTTEADSGYTPMDLAVALGY 147 (172)
T ss_dssp CHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHhCc
Confidence 99999999999999 99999999999998 99999966665 589999999999999999988653
No 5
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=2.2e-29 Score=155.17 Aligned_cols=140 Identities=24% Similarity=0.308 Sum_probs=126.7
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.++|+.|++.|+.++|++|++.|.++ +..+. .|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADV-NAEDA--SGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALF 90 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCC-CCCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 37899999999999999999999886 44443 4899999999999999999999999887 67789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
++.+++++|++.|++ ++..+..|.|||+. ++.+++++|+. .|++++.++..|.||+++|+++..
T Consensus 91 ~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~ 158 (169)
T 2y1l_E 91 GHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLK-NGADVNAQDKFGKTAFDISIDNGN 158 (169)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHhCC
Confidence 999999999999999 99999999999998 99999966666 588999999999999999998754
No 6
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=9.6e-30 Score=156.42 Aligned_cols=140 Identities=21% Similarity=0.122 Sum_probs=126.9
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
+||||.|+..|+.+++++|++.+..+ +..+. .|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVI-NHTDE--EGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSK 79 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCc-CCCCC--CCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHc
Confidence 47999999999999999999999775 44453 4899999999999999999999998887 66789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
++.+++++|++.|++ ++..+..|.|||+. ++.+++++|+. .|++++.++..|.||+|+|+++..
T Consensus 80 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 80 GYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAVALGY 147 (167)
T ss_dssp TCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCc
Confidence 999999999999999 99999999999998 89999977766 688999999999999999987653
No 7
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=5.4e-30 Score=156.71 Aligned_cols=140 Identities=16% Similarity=0.261 Sum_probs=126.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.++|+.|++.|+.+++++|++.+.++ +..+. .|.||||+|+. ++.+++++|++.+.++ +..+..|.||||+|+..
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~--~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNV-NAQNG--FGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARA 80 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCT--TSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCc-cccCc--cCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 58999999999999999999999876 44443 48999999999 9999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
|+.+++++|++.|++ ++..+..|.|||++ ++.+++++|+......++.++..|.||+|+|+++..
T Consensus 81 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 149 (162)
T 1ihb_A 81 GFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR 149 (162)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCC
Confidence 999999999999999 99999999999998 999999888887655578999999999999998764
No 8
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=3.5e-29 Score=153.63 Aligned_cols=138 Identities=22% Similarity=0.234 Sum_probs=124.2
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
+++|+.|++.|+.+++++|++.++......+. .|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEG--RQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSY 85 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTT--TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCCcccccc--CCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHc
Confidence 47999999999999999999977644344443 4889999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSK 144 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 144 (151)
++.+++++|++.|++ ++..+..|.|||++ ++.+++++|+. .|++.+.++..|.||+|+|.+
T Consensus 86 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 86 GHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQ-HGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTGGGSCT
T ss_pred CcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCChhHhHhc
Confidence 999999999999999 99999999999998 99999977665 589999999999999999876
No 9
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.3e-29 Score=159.02 Aligned_cols=140 Identities=19% Similarity=0.181 Sum_probs=127.1
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.++++ +..+..|.||||+|+..
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 111 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDKL-EDKDI--EGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIF 111 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcccc-ccccc--cCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHc
Confidence 48999999999999999999998876 44443 4899999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
++.+++++|++.|++ ++..+..|.|||++ ++.+++++|+. .|++++.++..|.||+|+|+++..
T Consensus 112 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 112 GYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLE-LGADISARDLTGLTAEASARIFGR 179 (192)
T ss_dssp TCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhCc
Confidence 999999999999999 99999999999998 99999977765 589999999999999999998754
No 10
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=6.5e-29 Score=154.36 Aligned_cols=139 Identities=20% Similarity=0.234 Sum_probs=124.9
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.++|+.|+..|+.+++++|++.++...+..+. .|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDD--HGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASH 82 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCC--CCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHc
Confidence 36799999999999999999997664455554 4999999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
++.+++++|++.|++ ++..+..|.|||++ ++.++++.|+. .|++++.++..|.||+++|++.
T Consensus 83 ~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 83 GHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVA-NGALVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSSBCCTTSCCGGGGSCHH
T ss_pred CCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcchhccCCCCcHHHHHHH
Confidence 999999999999999 99999999999998 89999966665 5899999999999999998764
No 11
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=7.9e-29 Score=150.72 Aligned_cols=139 Identities=22% Similarity=0.296 Sum_probs=123.7
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.++|+.|+..|+.+++++|++......+..+. .|.||||+ +..|+.+++++|++.|.++ +..+..|.||||+|+..
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~--~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNR--FGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCT--TSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCC--CCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHc
Confidence 47999999999999999999993222244443 49999999 9999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
|+.+++++|++.|++ ++..+..|.|||+. ++.+++++|+.. ++++.++..|.||+|+|+++..
T Consensus 79 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 79 GFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp TCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCC
T ss_pred CcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCc
Confidence 999999999999999 99999999999998 999999877776 7999999999999999998754
No 12
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1.6e-28 Score=157.59 Aligned_cols=138 Identities=19% Similarity=0.151 Sum_probs=90.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHhC--hhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHh
Q 048410 3 HYVILAAQAGNVDALYELIWED--AYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQ 80 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~--~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~ 80 (151)
||||.|+..|+.+++++|++.+ +++ ...+. .|.||||+|+..++.+++++|++.+.+. +..+..|.||||+|+.
T Consensus 74 t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~--~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 149 (228)
T 2dzn_A 74 TPFHIACSVGNLEVVKSLYDRPLKPDL-NKITN--QGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAAS 149 (228)
T ss_dssp CHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCT--TCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCc--CCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHH
Confidence 5666666666666666666665 332 22222 3667777777777777777777766665 4556667777777777
Q ss_pred cCCHHHHHHHHhhc-cccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 81 NSHTQMVLRLIDVD-RNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 81 ~~~~~~~~~ll~~~-~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
.|+.+++++|++.| ++ ++..+..|.|||++ ++.+++++|++..|++++.+|..|.||+++|++.
T Consensus 150 ~~~~~~v~~Ll~~g~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 150 VGSLKLIELLCGLGKSA-VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp TTCHHHHHHHHTTTCCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred cCCHHHHHHHHhcCccc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 77777777777776 44 66677777777776 6777776666556677777777777777776543
No 13
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=1.6e-28 Score=158.08 Aligned_cols=141 Identities=22% Similarity=0.278 Sum_probs=123.7
Q ss_pred CHHHHHHHHcCCHHHHHHHHHh-ChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCcc----ccCCCCCCcHHH
Q 048410 2 SHYVILAAQAGNVDALYELIWE-DAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFA----RKQNQYGFSPLH 76 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~----~~~~~~~~t~L~ 76 (151)
+||||.|++.|+.+++++|++. +.++ +..+. .|.||||+|+..|+.+++++|++.+++.. +..+..|.||||
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEV-HQRGA--MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCC--CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 5899999999999999999998 6665 55553 49999999999999999999999987753 345678999999
Q ss_pred HHHhcCCHHHHHHHHhhccccccccCC-------------CCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcc
Q 048410 77 LALQNSHTQMVLRLIDVDRNLVRVQGR-------------EGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILL 139 (151)
Q Consensus 77 ~a~~~~~~~~~~~ll~~~~~~~~~~~~-------------~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l 139 (151)
+|+..|+.+++++|++.|++ ++..+. .|.|||+. ++.+++++|+. .|++++.+|..|.|||
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~L 158 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE-HGADIRAQDSLGNTVL 158 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHH
Confidence 99999999999999999998 777765 79999998 99999977765 5899999999999999
Q ss_pred ccccccCC
Q 048410 140 PFSSKFSP 147 (151)
Q Consensus 140 ~~a~~~~~ 147 (151)
|+|+...+
T Consensus 159 ~~A~~~~~ 166 (232)
T 2rfa_A 159 HILILQPN 166 (232)
T ss_dssp HHHHTCSC
T ss_pred HHHHHcCC
Confidence 99998754
No 14
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=5.4e-29 Score=164.36 Aligned_cols=142 Identities=20% Similarity=0.223 Sum_probs=127.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHH-----hcCCHHHHHHHHHhCCCccccCCCCCCcHHH
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAA-----SMGHVNFALEIMRLKPSFARKQNQYGFSPLH 76 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~-----~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~ 76 (151)
.||||.|+..|+.+++++|++.|+...+..+. .|.|||++|+ ..++.++++.|++.+... ...+..|.||||
T Consensus 112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~--~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh 188 (276)
T 4hbd_A 112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNR--AGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQAGQTALM 188 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCT--TSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCC--CCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHH
Confidence 48999999999999999999999843355554 4999999999 567899999999999776 667888999999
Q ss_pred HHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 77 LALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 77 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
+|+..|+.+++++|++.|++ ++.+|..|.|||++ ++.++++.|+...|++++.+|..|.||||+|++++.
T Consensus 189 ~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 189 LAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC
Confidence 99999999999999999999 99999999999998 999999888876899999999999999999998753
No 15
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=2.3e-28 Score=154.20 Aligned_cols=139 Identities=16% Similarity=0.170 Sum_probs=80.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
||||.|++.|+.+++++|++.|+++ +..+. .|.||||+|+..|+.+++++|++.+....+..+..|.||||+|+..+
T Consensus 41 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 117 (201)
T 3hra_A 41 TPLNIAVHNNDIEIAKALIDRGADI-NLQNS--ISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKG 117 (201)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC--CCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcC
Confidence 5666666666666666666666554 22222 25666666666666666666664444333455566666666666666
Q ss_pred CHHHHHHHHhhc-cccccccCCCCCCcccc----cC-----HHHHHHHHHhCCCCcccccccCCCccccccccC
Q 048410 83 HTQMVLRLIDVD-RNLVRVQGREGVTPLHY----GN-----VDLLYKFLAACPESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 83 ~~~~~~~ll~~~-~~~~~~~~~~~~t~l~~----~~-----~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 146 (151)
+.+++++|++.+ ++ ++..+..|.|||+. +. .+++++|+. .|++++.++..|.||+|+|+++.
T Consensus 118 ~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~ 189 (201)
T 3hra_A 118 HIDNVKLLLEDGRED-IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLME-NGADQSIKDNSGRTAMDYANQKG 189 (201)
T ss_dssp CHHHHHHHHHHCCCC-TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCC-cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHH-CCCCCCccCCCCCCHHHHHHHcC
Confidence 666666666665 34 56666666666665 33 555544433 35666666666666666665543
No 16
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=2.6e-28 Score=156.18 Aligned_cols=138 Identities=23% Similarity=0.185 Sum_probs=82.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
||||.|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.++...+..+..|.||||+|+..+
T Consensus 27 t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 103 (223)
T 2f8y_A 27 TALHLAARYSRSDAAKRLLEASADA-NIQDN--MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 103 (223)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred chHHHHHHcCCHHHHHHHHHcCCCC-CCcCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhC
Confidence 5667777777777777777666654 33332 25666666666666666666666655333455556666666666666
Q ss_pred CHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 83 HTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
+.+++++|++.+++ ++..+..|.|||+. ++.+++++|+.. |++++.++..|.||+|+|+++
T Consensus 104 ~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 168 (223)
T 2f8y_A 104 VEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFLAARE 168 (223)
T ss_dssp CHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHH
T ss_pred cHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCcCHHHHHHHc
Confidence 66666666666655 55566666666665 556666444443 556666666666666665544
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=4.8e-28 Score=155.35 Aligned_cols=139 Identities=19% Similarity=0.177 Sum_probs=69.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhC--CCccccCCCCCCcHHHHHHh
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLK--PSFARKQNQYGFSPLHLALQ 80 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~t~L~~a~~ 80 (151)
||||.|++.|+.+++++|++.++......+. .|.||||+|+..|+.+++++|++.+ .+.....+..|.||||+|+.
T Consensus 4 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 4 YPLHQACMENEFFKVQELLHSKPSLLLQKDQ--DGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred cHHHHHHHhCCHHHHHHHHhcCccccccCCC--CCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 4555555555555555555555554333332 2555555555555555555555555 22211134455555555555
Q ss_pred cCCHHHHHHHHhhc--cccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 81 NSHTQMVLRLIDVD--RNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 81 ~~~~~~~~~ll~~~--~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
.|+.+++++|++.| ++ ++..+..|.|||+. ++.+++++|+. .|++++.++..|.||||+|+++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~ 150 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIE-NGASVRIKDKFNQIPLHRAASV 150 (228)
T ss_dssp HCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHH-cCCCccccCCCCCCHHHHHHHc
Confidence 55555555555554 33 44445555555554 44555533333 2445555555555555555443
No 18
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=5.6e-28 Score=148.90 Aligned_cols=124 Identities=27% Similarity=0.341 Sum_probs=107.0
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.|||+.|+..|+.++++.|++.|.++ +.++. .|.||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..
T Consensus 38 ~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~--~g~TpLh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~ 113 (169)
T 4gpm_A 38 RTPLHHAAENGHKEVVKLLISKGADV-NAKDS--DGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAEN 113 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccch-hhhcc--CCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHc
Confidence 48999999999999999999999987 45553 4999999999999999999999999988 77899999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQV 131 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~ 131 (151)
|+.+++++|++.|++ ++.+|..|.|||++ ++.+++ .+|...|++++..
T Consensus 114 g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv-~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 114 GHKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVV-KLLEKQGGWLEHH 165 (169)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHH-HHHHTC-------
T ss_pred CCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHH-HHHHHCCCCcCCC
Confidence 999999999999999 99999999999998 899999 5555678888763
No 19
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=6.7e-28 Score=152.08 Aligned_cols=143 Identities=19% Similarity=0.189 Sum_probs=127.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.++|+.|+..|+.+.+++++..++...+..+. .|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQVDEVDT--EGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 37999999999999999999998843355554 4899999999999999999999999887 67789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
|+.+++++|++.++..++..+..|.|||+. ++.+++++|+...+++++.++..|.||||+|+.+.+
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLRE 152 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSC
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhcc
Confidence 999999999966554389999999999998 999999999988779999999999999999997764
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=2.7e-28 Score=159.76 Aligned_cols=138 Identities=20% Similarity=0.221 Sum_probs=106.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
||||.|+..|+.+++++|++.|+++... . .|.||||+|+..|+.+++++|++.+++. +..+..|.||||+|+..+
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 145 (261)
T 2xai_A 71 TPLFNACVSGSWDCVNLLLQHGASVQPE-S---DLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQ 145 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCS-C---TTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCC-C---CCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhC
Confidence 5677777777777777777776654221 1 2678888888888888888888887776 566888888888888888
Q ss_pred CHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCCC
Q 048410 83 HTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSPI 148 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 148 (151)
+.+++++|++.|++ ++. +..|.||||. ++.++++.|+. .|++++.+|..|.||+|+|++..++
T Consensus 146 ~~~~v~~Ll~~g~~-~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpl~~A~~~~~~ 212 (261)
T 2xai_A 146 QRACVKKLLESGAD-VNQ-GKGQDSPLHAVARTASEELACLLMD-FGADTQAKNAEGKRPVELVPPESPL 212 (261)
T ss_dssp CHHHHHHHHHHTCC-TTC-CBTTBCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGSCTTCTH
T ss_pred CHHHHHHHHHcCCC-CCC-CCCCCChHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCChhhhccccccH
Confidence 88888888888888 664 7788899887 88888866655 5888999999999999998876654
No 21
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=1.9e-28 Score=159.78 Aligned_cols=137 Identities=23% Similarity=0.192 Sum_probs=71.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
||||.|+..|+.+++++|++.|.++ +..+. .|.||||+|+..++.+++++|++.++...+..+..|.||||+|+..+
T Consensus 59 t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 135 (253)
T 1yyh_A 59 TALHLAARYSRSDAAKRLLEASADA-NIQDN--MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 135 (253)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC
Confidence 5666666666666666666666554 22222 25566666666666666666555554322444444555555555555
Q ss_pred CHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccc
Q 048410 83 HTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSK 144 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 144 (151)
+.+++++|++.|++ ++..+..|.|||++ ++.+++++|+. .|++++.++..|.||||+|++
T Consensus 136 ~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 136 VEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp CSSHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred hHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHH
Confidence 55555555555444 44444455555544 44444433332 244444444455555554443
No 22
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=2.9e-28 Score=157.33 Aligned_cols=141 Identities=22% Similarity=0.183 Sum_probs=121.3
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCc-----cccCCCCCCcHHH
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSF-----ARKQNQYGFSPLH 76 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~-----~~~~~~~~~t~L~ 76 (151)
.||||.|+..|+.+++++|++.|+++ +..+. .|.||||+|+..|+.+++++|++.+... .+..+..|.||||
T Consensus 46 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~ 122 (236)
T 1ikn_D 46 QTPLHLAVITNQPEIAEALLGAGCDP-ELRDF--RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 122 (236)
T ss_dssp CCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCT--TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC--CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHH
Confidence 47999999999999999999998876 44443 4899999999999999999999988642 3566888999999
Q ss_pred HHHhcCCHHHHHHHHhhccccccccCC-CCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 77 LALQNSHTQMVLRLIDVDRNLVRVQGR-EGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 77 ~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
+|+..|+.+++++|++.|++ ++..+. .|.|||++ ++.+++++|+. .|++++.++..|.||+|+|+++..
T Consensus 123 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 123 LASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLK-CGADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp HHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHT-TTCCSCCCCTTCCCGGGGCTTSSC
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcccCCCCCHHHHHHccCc
Confidence 99999999999999999999 888887 89999998 88999966665 588999999999999999987653
No 23
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.4e-27 Score=153.78 Aligned_cols=139 Identities=17% Similarity=0.131 Sum_probs=118.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
|+||.|+..|+.+++++|++.|+++ +..+. .|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~--~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~g 98 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEMNDP-SQPNE--EGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASCN 98 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSSCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHhcCCCC-CCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcC
Confidence 7899999999999999999999886 44443 4999999999999999999999999887 677999999999999999
Q ss_pred CHHHHHHHHhhccccccccC-CCCCCcccc------cCHHHHHHHHHh-----------------------------CCC
Q 048410 83 HTQMVLRLIDVDRNLVRVQG-REGVTPLHY------GNVDLLYKFLAA-----------------------------CPE 126 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~------~~~~~~~~ll~~-----------------------------~~~ 126 (151)
+.+++++|++.|++ ++..+ ..|.|||++ ++.+++++|+.. .|+
T Consensus 99 ~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga 177 (229)
T 2vge_A 99 DTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGE 177 (229)
T ss_dssp CHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTC
T ss_pred CHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccc
Confidence 99999999999999 88876 699999996 788999777663 122
Q ss_pred C--cccccccCCCccccccccC
Q 048410 127 S--ILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 127 ~--~~~~~~~g~t~l~~a~~~~ 146 (151)
+ ++.+|..|.||||+|++++
T Consensus 178 ~~~~~~~d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 178 SVTVLRRDGPEETDWWWAALHG 199 (229)
T ss_dssp EEEEEESSCTTCSSEEEEEETT
T ss_pred cccccccCCCcccHHHHHHHcC
Confidence 3 3445666788888877654
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=7.2e-28 Score=154.88 Aligned_cols=136 Identities=21% Similarity=0.229 Sum_probs=55.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
||||.|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.+.+. +..+..|.||||+|+..+
T Consensus 42 t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 117 (231)
T 3aji_A 42 TALHWACSAGHTEIVEFLLQLGVPV-NDKDD--AGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKN 117 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CHHHHHHHcCcHHHHHHHHHhCCCC-CCcCC--CCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcC
Confidence 3444444444444444444444332 22221 1344444444444444444444444333 233334444444444444
Q ss_pred CHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccc
Q 048410 83 HTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSK 144 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 144 (151)
+.+++++|++.|++ ++..+..|.|||+. ++.+++++|+. .|++++.++..|.||||+|++
T Consensus 118 ~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~ 181 (231)
T 3aji_A 118 RHEIAVMLLEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLF-YKASTNIQDTEGNTPLHLACD 181 (231)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCccccCCCCCCHHHHHHH
Confidence 44444444444443 33444444444443 44444433222 233444444444444444443
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=2.9e-28 Score=158.92 Aligned_cols=141 Identities=18% Similarity=0.106 Sum_probs=126.9
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.++......+. .|.||||+|+..++.+++++|++.++++ +..+..|.||||+|+..
T Consensus 91 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~ 167 (253)
T 1yyh_A 91 RTPLHAAVSADAQGVFQILIRNRATDLDARMH--DGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAV 167 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCT--TCCCHHHHHHHHTCSSHHHHHHHTTCCT-TCBCTTSCBHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccccCC--CCCcHHHHHHHcChHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHc
Confidence 48999999999999999999998844455553 4899999999999999999999999887 67789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
|+.+++++|++.|++ ++..+..|.|||++ ++.++++.|+. .|++++.+|..|.||+++|++...
T Consensus 168 ~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 168 NNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLD-HFANRDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCccccccCCCCHHHHHHHcCC
Confidence 999999999999999 99999999999998 99999966655 688999999999999999988653
No 26
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=1.9e-28 Score=153.22 Aligned_cols=139 Identities=10% Similarity=0.048 Sum_probs=119.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCH----HHHHHHHHhCCCccccCCCCCCcHHHHH
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHV----NFALEIMRLKPSFARKQNQYGFSPLHLA 78 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~t~L~~a 78 (151)
++|+.|++.|+.+.++.++..+........ |.||||+|+..++. +++++|++.|+++ +.++..|.||||+|
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~----g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a 82 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYEDKESVL----KSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPL 82 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSCHHHHH----TTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCcccccccC----CCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 568999999999999999998876433232 89999999999975 5899999999998 77799999999999
Q ss_pred HhcCC------HHHHHHHHhhccccccccCCCCC-Ccccc----c-----CHHHHHHHHHhCCCCcccccccCCCccccc
Q 048410 79 LQNSH------TQMVLRLIDVDRNLVRVQGREGV-TPLHY----G-----NVDLLYKFLAACPESILQVTIYFPILLPFS 142 (151)
Q Consensus 79 ~~~~~------~~~~~~ll~~~~~~~~~~~~~~~-t~l~~----~-----~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a 142 (151)
+..++ .+++++|++.|++ ++.+|..|. ||||+ + ..++++.|+...|++++.+|..|.||||+|
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 99886 6789999999999 999999999 99998 1 245775555548999999999999999999
Q ss_pred cccCC
Q 048410 143 SKFSP 147 (151)
Q Consensus 143 ~~~~~ 147 (151)
+++..
T Consensus 162 ~~~~~ 166 (186)
T 3t8k_A 162 KRCQK 166 (186)
T ss_dssp HTTTC
T ss_pred HHcCC
Confidence 98754
No 27
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1.5e-27 Score=153.54 Aligned_cols=143 Identities=22% Similarity=0.165 Sum_probs=121.0
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhh--cCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCC----------
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQI--DRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQ---------- 69 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~--~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~---------- 69 (151)
.||||.|+..|+.+++++|++.++++.... ..+..|.||||+|+..|+.+++++|++.+++. +..+.
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~ 116 (232)
T 2rfa_A 38 ETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHN 116 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccc
Confidence 489999999999999999999999864321 11134899999999999999999999999887 34333
Q ss_pred ---CCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHH----HHHHHhCCCCc------cccc
Q 048410 70 ---YGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLL----YKFLAACPESI------LQVT 132 (151)
Q Consensus 70 ---~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~----~~ll~~~~~~~------~~~~ 132 (151)
.|.||||+|+..|+.+++++|++.|++ ++.+|..|.|||++ ++.+++ +.|+. .|++. +.++
T Consensus 117 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~~~~~ 194 (232)
T 2rfa_A 117 LIYYGEHPLSFAACVGSEEIVRLLIEHGAD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLLS-YDGGDHLKSLELVPN 194 (232)
T ss_dssp SCCCCSSHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHH-TTCSCSSCCGGGCCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHh-cCCchhhhhhhccCC
Confidence 799999999999999999999999999 99999999999998 777776 55555 56666 5788
Q ss_pred ccCCCccccccccCC
Q 048410 133 IYFPILLPFSSKFSP 147 (151)
Q Consensus 133 ~~g~t~l~~a~~~~~ 147 (151)
..|.||||+|++...
T Consensus 195 ~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 195 NQGLTPFKLAGVEGN 209 (232)
T ss_dssp TTSCCHHHHHHHHTC
T ss_pred CCCCCHHHHHHHcCC
Confidence 999999999998653
No 28
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=1.2e-27 Score=153.76 Aligned_cols=141 Identities=24% Similarity=0.315 Sum_probs=127.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
+++|+.|++.|+.+.++++++.++......+. .|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 83 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQ--DSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASA 83 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHH
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCC--CCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHc
Confidence 57899999999999999999999876566554 4999999999999999999999999887 67789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
|+.+++++|++.|++ ++..+..|.|||+. ++.+++++|+. .|++.+.++..|.||||+|+++.+
T Consensus 84 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~ 151 (231)
T 3aji_A 84 GXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLE-GGANPDAKDHYDATAMHRAAAKGN 151 (231)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCC
Confidence 999999999999999 89999999999998 89999966665 688999999999999999987653
No 29
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=5.1e-28 Score=159.52 Aligned_cols=78 Identities=23% Similarity=0.194 Sum_probs=45.8
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCC-CCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcccc
Q 048410 67 QNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGR-EGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPF 141 (151)
Q Consensus 67 ~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~ 141 (151)
.+..|.||||+|+..|+.+++++|++.|++ ++..+. .|.||||+ ++.+++++|+. .|++++.++..|.||||+
T Consensus 154 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL~~ 231 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEAQAASVLELLLK-AGADPTARMYGGRTPLGS 231 (282)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHH
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCcccccCCCCHHHH
Confidence 344555666666666666666666666665 555553 36666665 66666644444 356666666666666666
Q ss_pred ccccC
Q 048410 142 SSKFS 146 (151)
Q Consensus 142 a~~~~ 146 (151)
|+++.
T Consensus 232 A~~~~ 236 (282)
T 1oy3_D 232 ALLRP 236 (282)
T ss_dssp HHTSS
T ss_pred HHHcC
Confidence 66543
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=1.3e-27 Score=152.96 Aligned_cols=141 Identities=18% Similarity=0.106 Sum_probs=126.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.++......+. .|.||||+|+..++.+++++|++.+++. +..+..|.||||+|+..
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 135 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRATDLDARMH--DGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAV 135 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCT--TCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC--CCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHc
Confidence 48999999999999999999998854455553 4899999999999999999999999887 66788999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
++.+++++|++.|++ ++..+..|.|||++ ++.+++++|+. .|++.+.++..|.||+++|+++..
T Consensus 136 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 136 NNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLD-HFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCccccccCCCHHHHHHHhcc
Confidence 999999999999999 99999999999998 99999966665 588999999999999999988653
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=1.2e-27 Score=154.34 Aligned_cols=140 Identities=18% Similarity=0.135 Sum_probs=95.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
||||.|+..|+.+++++|++.++......+. .|.||||+|+..++.+++++|++.+.++ +..+..|.||||+|+..|
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~--~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD--GGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSG 155 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHC
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCcccCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCC
Confidence 5666666666666666666666332233332 3667777777777777777777776665 555667777777777777
Q ss_pred CHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 83 HTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
+.+++++|++.|++ ++..+..|.|||++ ++.++++.|+. .|++++.+|..|.||+|+|+++++
T Consensus 156 ~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 156 CVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLS-RDSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp CHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred CHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHH-cCCCCCccCCCCCCHHHHHHHHHH
Confidence 77777777777777 77777777777776 67777744444 467777777777777777776653
No 32
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=1.8e-28 Score=160.00 Aligned_cols=143 Identities=16% Similarity=0.087 Sum_probs=122.6
Q ss_pred CHHHHHHHHc---CCHHHHHHHHHhChhhhhhh--------cCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCC
Q 048410 2 SHYVILAAQA---GNVDALYELIWEDAYLLDQI--------DRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQY 70 (151)
Q Consensus 2 ~~~l~~a~~~---g~~~~v~~ll~~~~~~~~~~--------~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 70 (151)
.||||.|+.. |+.+++++|++.|++..... +.+..|.||||+|+..|+.+++++|++.|+++ +..+..
T Consensus 44 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~ 122 (256)
T 2etb_A 44 KTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACG 122 (256)
T ss_dssp BCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCS
T ss_pred CCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Cccccc
Confidence 4899999999 99999999999998763221 11124899999999999999999999999887 555654
Q ss_pred -------------CCcHHHHHHhcCCHHHHHHHHh---hccccccccCCCCCCcccc------cCHH-------HHHHHH
Q 048410 71 -------------GFSPLHLALQNSHTQMVLRLID---VDRNLVRVQGREGVTPLHY------GNVD-------LLYKFL 121 (151)
Q Consensus 71 -------------~~t~L~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~t~l~~------~~~~-------~~~~ll 121 (151)
|.||||+|+..|+.+++++|++ .|++ ++.++..|.||||+ ++.+ +++.|+
T Consensus 123 ~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll 201 (256)
T 2etb_A 123 RFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLL 201 (256)
T ss_dssp GGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHH
Confidence 9999999999999999999999 8998 99999999999998 5666 886666
Q ss_pred HhCCCCc-------ccccccCCCccccccccCC
Q 048410 122 AACPESI-------LQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 122 ~~~~~~~-------~~~~~~g~t~l~~a~~~~~ 147 (151)
. .|+++ +.+|..|.||||+|++...
T Consensus 202 ~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 202 Q-MGARLCPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp H-HHHHHSTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred H-cCCCcccccccccccCCCCCCHHHHHHHhCC
Confidence 5 47888 8899999999999998764
No 33
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=3e-28 Score=148.35 Aligned_cols=136 Identities=15% Similarity=0.160 Sum_probs=105.0
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCc-HHHHHHh
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFS-PLHLALQ 80 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t-~L~~a~~ 80 (151)
.|+||.|++.|+.+++++|++.|.++ +..+. .|.||||+|+ .|+.+++++|++.+.++ +..+..|.| |||+|+.
T Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVRALLEAGANP-NAPNS--YGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAAR 87 (156)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCS--SSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHHH
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC--CCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHH
Confidence 58999999999999999999999876 44443 4999999985 89999999999999887 677999999 9999999
Q ss_pred cCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccc
Q 048410 81 NSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSK 144 (151)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 144 (151)
.|+.+++++|++.|++ ++.++..|.|||++ ++.+++++| ...|++++.++..|.|+.+.+..
T Consensus 88 ~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~L-l~~ga~~~~~~~~g~t~~~~~~~ 153 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYL-RAAAGGTRGSNHARIDAAEGPSD 153 (156)
T ss_dssp HTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHH-SSCC-------------------
T ss_pred CCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHH-HHcCCCCCccCcCcCcccccCCC
Confidence 9999999999999999 99999999999998 999999555 55699999999999999875543
No 34
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=156.29 Aligned_cols=138 Identities=19% Similarity=0.137 Sum_probs=96.3
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.|.++ +..+. .|.||||+|+..|+.+++++|++.++++ +..+..|.||||+|+..
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAV-NIITA--DHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVS 79 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCT--TCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHc
Confidence 46777888888888888887777665 33332 3777777777777777777777777666 55677777777777777
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 146 (151)
|+.+++++|++.|++ ++. +..|.|||+. ++.++++.|+. .|++++.++..|.||||+|+++.
T Consensus 80 ~~~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~ 145 (261)
T 2xai_A 80 GSWDCVNLLLQHGAS-VQP-ESDLASPIHEAARRGHVECVNSLIA-YGGNIDHKISHLGTPLYLACENQ 145 (261)
T ss_dssp TCHHHHHHHHHTTCC-SSC-SCTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTT
T ss_pred CCHHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHHhC
Confidence 777777777777766 443 3447777776 67777755444 46677777777777777776654
No 35
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=6.4e-28 Score=162.66 Aligned_cols=140 Identities=11% Similarity=0.042 Sum_probs=119.9
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCC---HHHHHHHHHhCCCccccCCCCCCcHHHHH
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGH---VNFALEIMRLKPSFARKQNQYGFSPLHLA 78 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~---~~~~~~ll~~~~~~~~~~~~~~~t~L~~a 78 (151)
.||||+|+..|+.++|++|++.|+++ +..+. .|.||||+|+..|+ .++++.|++.+....+..+..|.||||+|
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~--~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A 208 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKHGSNR-LYGDN--MGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHI 208 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCT--TCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC--CCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHH
Confidence 48999999999999999999999987 45553 49999999999998 67778888877444477899999999999
Q ss_pred Hh----cCCHHHHHHHHhhcc---------------------------------------------ccccccCCCCCCcc
Q 048410 79 LQ----NSHTQMVLRLIDVDR---------------------------------------------NLVRVQGREGVTPL 109 (151)
Q Consensus 79 ~~----~~~~~~~~~ll~~~~---------------------------------------------~~~~~~~~~~~t~l 109 (151)
+. .|+.+++++|++.++ . ++.++..|.|||
T Consensus 209 ~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~-~n~~d~~G~TpL 287 (327)
T 1sw6_A 209 IITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM-LNAQDSNGDTCL 287 (327)
T ss_dssp HHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHT-TTCCCTTSCCHH
T ss_pred HHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhC-CCCCCCCCCCHH
Confidence 99 899999999998753 3 677888999999
Q ss_pred cc----cCHHHHHHHHHhCCCCcccccccCCCccccccccC
Q 048410 110 HY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 110 ~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 146 (151)
|+ ++.++++.|+. .|++++.+|..|.||||+|++++
T Consensus 288 h~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 288 NIAARLGNISIVDALLD-YGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHHCCHHHHHHHHH-TTCCTTCCCTTSCCGGGGTCC--
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHhcC
Confidence 98 99999966664 68999999999999999998763
No 36
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=158.13 Aligned_cols=137 Identities=20% Similarity=0.216 Sum_probs=103.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
||||.|+..|+.+++++|++.++++... + .|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..|
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~---~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~ 201 (285)
T 3d9h_A 127 TPLFNACVSGSWDCVNLLLQHGASVQPE-S---DLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQ 201 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCS-C---TTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTT
T ss_pred CHHHHHHHcCHHHHHHHHHHCCCCCCCC-C---CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcC
Confidence 5666677767777777776666654221 1 2678888888888888888888877776 566788888888888888
Q ss_pred CHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 83 HTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
+.+++++|++.|++ ++. +..|.|||++ ++.+++++|+. .|++++.+|..|.||+|+|++..+
T Consensus 202 ~~~~v~~Ll~~ga~-~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~~~~~ 267 (285)
T 3d9h_A 202 QRACVKKLLESGAD-VNQ-GKGQDSPLHAVVRTASEELACLLMD-FGADTQAKNAEGKRPVELVPPESP 267 (285)
T ss_dssp CHHHHHHHHHTTCC-TTC-CBTTBCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGSCTTSH
T ss_pred cHHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHhcCccH
Confidence 88888888888887 664 7788888887 88888866655 578888888889999998886543
No 37
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=4.4e-27 Score=151.72 Aligned_cols=137 Identities=24% Similarity=0.271 Sum_probs=64.0
Q ss_pred HHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCC
Q 048410 4 YVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSH 83 (151)
Q Consensus 4 ~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~ 83 (151)
|||.|+..|+.+++++|++.|..+ ...+. .|.||||+|+..|+.+++++|++.++...+..+..|.||||+|+..++
T Consensus 47 ~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~ 123 (237)
T 3b7b_A 47 PLMEAAENNHLEAVKYLIKAGALV-DPKDA--EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH 123 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCC-CCCCT--TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHhCCHHHHHHHHhCCCCC-CCCCC--CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC
Confidence 444444444444444444444332 11111 244444444444444444444444422223344445555555555555
Q ss_pred HHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 84 TQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
.+++++|++.|++ ++..+..|.|||+. ++.+++++|+. .|++++.++..|.||||+|+++
T Consensus 124 ~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~ 187 (237)
T 3b7b_A 124 VDLVKLLLSKGSD-INIRDNEENICLHWAAFSGCVDIAEILLA-AKCDLHAVNIHGDSPLHIAARE 187 (237)
T ss_dssp HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHh
Confidence 5555555555554 45555555555554 55555533332 3455555555555555555544
No 38
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=5.7e-27 Score=155.84 Aligned_cols=90 Identities=18% Similarity=0.207 Sum_probs=42.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
++|+.|+..|+.++|++|++.|.++ +..+. .|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|
T Consensus 42 t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 42 AVFLAACSSGDTEEVLRLLERGADI-NYANV--DGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHCCCT-TCBCT--TCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCC-cccCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcC
Confidence 3455555555555555555554443 22221 2445555555555555555555444443 333444444444444444
Q ss_pred CHHHHHHHHhhccc
Q 048410 83 HTQMVLRLIDVDRN 96 (151)
Q Consensus 83 ~~~~~~~ll~~~~~ 96 (151)
+.+++++|++.|++
T Consensus 118 ~~~~v~~Ll~~g~~ 131 (299)
T 1s70_B 118 YLDIAEYLISQGAH 131 (299)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHhCCCC
Confidence 44444444444444
No 39
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=6.7e-27 Score=155.51 Aligned_cols=138 Identities=22% Similarity=0.215 Sum_probs=120.2
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCcccc---------------
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARK--------------- 66 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~--------------- 66 (151)
.||||.|+..|+.+++++|++.|+++ +..+. .|.||||+|+..|+.+++++|++.++++...
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~--~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 150 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENGANI-NQPDN--EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA 150 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC--CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcc
Confidence 48999999999999999999999886 44443 4899999999999999999999998765211
Q ss_pred --------------------------------------------CCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccC
Q 048410 67 --------------------------------------------QNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQG 102 (151)
Q Consensus 67 --------------------------------------------~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~ 102 (151)
.+..|.||||+|+..|+.+++++|++.|++ ++..+
T Consensus 151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d 229 (299)
T 1s70_B 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKD 229 (299)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCC
T ss_pred hHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcC
Confidence 224578999999999999999999999999 99999
Q ss_pred CCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccc
Q 048410 103 REGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSK 144 (151)
Q Consensus 103 ~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 144 (151)
..|.|||++ ++.++++.|+. .|++++.+|..|.||+|+|.+
T Consensus 230 ~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 230 YDGWTPLHAAAHWGKEEACRILVE-NLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTTTSCCS
T ss_pred CCCCcHHHHHHhcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHH
Confidence 999999998 99999966665 589999999999999999875
No 40
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=9.1e-27 Score=150.46 Aligned_cols=138 Identities=20% Similarity=0.126 Sum_probs=90.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhh---hhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCC-CCCCcHHHHH
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYL---LDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQN-QYGFSPLHLA 78 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~---~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~L~~a 78 (151)
||||.|+..|+.+++++|++.++.. ....+ ..|.||||+|+..++.+++++|++.+.+. +..+ ..|.||||+|
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDLEARN--YDGLTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIHA 157 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCC--TTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccccccC--cCCCcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHHH
Confidence 4566666666666666666655410 12222 23667777777777777777777776665 3334 6677777777
Q ss_pred HhcCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 79 LQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 79 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
+..|+.+++++|++.|++ ++..+..|.|||++ ++.+++++|+. .|++++.+|..|.||+|+|++.
T Consensus 158 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVR-SGADSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp HHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCTTTTCSSH
T ss_pred HHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCCcCCCCCCHHHHHHhc
Confidence 777777777777777777 77777777777776 77777755554 5677777777777777777654
No 41
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=6.5e-27 Score=155.06 Aligned_cols=138 Identities=19% Similarity=0.137 Sum_probs=92.7
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.|.++ +..+. .|.||||+|+..|+.+++++|++.+++. +..+..|.||||+|+..
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~ 135 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWAV-NIITA--DHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVS 135 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCS-CEECT--TCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC--CCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHc
Confidence 36777777777777777777777664 33332 3777777777777777777777777665 55567777777777777
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 146 (151)
|+.+++++|++.++. ++. +..|.|||+. ++.+++++|+. .|++++.++..|.||||+|+++.
T Consensus 136 ~~~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~ 201 (285)
T 3d9h_A 136 GSWDCVNLLLQHGAS-VQP-ESDLASPIHEAARRGHVECVNSLIA-YGGNIDHKISHLGTPLYLACENQ 201 (285)
T ss_dssp TCHHHHHHHHHTTCC-SSC-SCTTSCHHHHHHHHTCHHHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTT
T ss_pred CHHHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcC
Confidence 777777777777666 443 2346677666 66666644444 45666666667777777666554
No 42
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=9.8e-27 Score=150.31 Aligned_cols=139 Identities=16% Similarity=0.134 Sum_probs=89.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCC---ccccCCCCCCcHHHHHH
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPS---FARKQNQYGFSPLHLAL 79 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~---~~~~~~~~~~t~L~~a~ 79 (151)
||||.|+..|+.+++++|++.|.++ ...+. .|.||||+|+..++.+++++|++.++. ..+..+..|.||||+|+
T Consensus 48 t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~ 124 (241)
T 1k1a_A 48 TPLHLAVITTLPSVVRLLVTAGASP-MALDR--HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 124 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCc-cccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHH
Confidence 5666666666666666666666554 22232 366677777666666666666666651 12445666677777777
Q ss_pred hcCCHHHHHHHHhhccccccccC-CCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccC
Q 048410 80 QNSHTQMVLRLIDVDRNLVRVQG-REGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 80 ~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 146 (151)
..++.+++++|++.|++ ++..+ ..|.|||+. ++.+++++|+. .|++++.++..|.||||+|+++.
T Consensus 125 ~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 125 NTECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVENNSLSMVQLLLQ-HGANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCC-cccccccCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcC
Confidence 77777777777777666 56655 567777776 66777755554 46677777777777777776544
No 43
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=5.1e-27 Score=154.73 Aligned_cols=110 Identities=19% Similarity=0.096 Sum_probs=85.6
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----
Q 048410 36 FVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY---- 111 (151)
Q Consensus 36 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~---- 111 (151)
.|.||||+|+..|+.+++++|++.++++....+..|.||||+|+..|+.+++++|++.|++ ++.++..|.|||++
T Consensus 157 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLR 235 (282)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTS
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CcccccCCCCHHHHHHHc
Confidence 4899999999999999999999999988433334599999999999999999999999999 99999999999998
Q ss_pred cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 112 GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 112 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
++.+++++|+ ..|++++.++..|.||+++|....+
T Consensus 236 ~~~~~v~~Ll-~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 236 PNPILARLLR-AHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp SCHHHHHHHH-HTTCCCCCCC---------------
T ss_pred CCcHHHHHHH-HcCCCcCcCCCcccccccccCCccc
Confidence 9999995555 5689999999999999999876543
No 44
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=3.8e-27 Score=156.19 Aligned_cols=136 Identities=17% Similarity=0.189 Sum_probs=103.5
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.|+++ +..+ |.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~----g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~ 105 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALK-NLLE----NEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDS 105 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGG-SCCT----TCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCC-CCCC----CCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHc
Confidence 47888999989999999998888876 3333 788888888888888888888888876 56688888888888888
Q ss_pred CCHHHHHHHHhhccccccccCCCC-CCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREG-VTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~-~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 146 (151)
|+.+++++|++.|++ ++..+..| .|||+. ++.+++++|+.. |++... ...|.||||+|+++.
T Consensus 106 g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~g~t~L~~A~~~g 172 (285)
T 3kea_A 106 GNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPSTFD-LAILLSCIHITIKNG 172 (285)
T ss_dssp TCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT-SCTTCC-CSTHHHHHHHHHHTT
T ss_pred CCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCcccc-ccCCccHHHHHHHcC
Confidence 888888888888888 88888888 688877 777777555554 333311 126677777766654
No 45
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=1.9e-27 Score=155.49 Aligned_cols=143 Identities=20% Similarity=0.123 Sum_probs=120.3
Q ss_pred CHHHHHHH---HcCCHHHHHHHHHhChhhhhh--------hcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCC--
Q 048410 2 SHYVILAA---QAGNVDALYELIWEDAYLLDQ--------IDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQN-- 68 (151)
Q Consensus 2 ~~~l~~a~---~~g~~~~v~~ll~~~~~~~~~--------~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-- 68 (151)
.||||.|+ +.|+.+++++|++.+.+.... ...+..|.||||+|+..|+.+++++|++.|+++ +..+
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~ 125 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARG 125 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEE
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-Cccccc
Confidence 48999999 779999999999998763211 111114899999999999999999999999887 5556
Q ss_pred ------------CCCCcHHHHHHhcCCHHHHHHHHh---hccccccccCCCCCCcccc----cC---------HHHHHHH
Q 048410 69 ------------QYGFSPLHLALQNSHTQMVLRLID---VDRNLVRVQGREGVTPLHY----GN---------VDLLYKF 120 (151)
Q Consensus 69 ------------~~~~t~L~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~t~l~~----~~---------~~~~~~l 120 (151)
..|.||||+|+..|+.+++++|++ .|++ ++.++..|.||||+ ++ .++++.|
T Consensus 126 ~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~L 204 (260)
T 3jxi_A 126 RFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLL 204 (260)
T ss_dssp CCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHH
T ss_pred cccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 579999999999999999999999 8898 99999999999998 44 5788666
Q ss_pred HHhCCCCc-------ccccccCCCccccccccCC
Q 048410 121 LAACPESI-------LQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 121 l~~~~~~~-------~~~~~~g~t~l~~a~~~~~ 147 (151)
+. .|+++ +.++..|.||||+|++++.
T Consensus 205 l~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 205 LI-KCAKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp HH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HH-hCcccccccchhhcccCCCCCHHHHHHHcCC
Confidence 55 57777 6789999999999998764
No 46
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=3.1e-27 Score=154.21 Aligned_cols=140 Identities=20% Similarity=0.221 Sum_probs=120.1
Q ss_pred CHHHHHHHHcCCHH----HHHHHHHhChhhhh---hhcCCCCCCchHHHHHhc---CCHHHHHHHHHhCCCccc------
Q 048410 2 SHYVILAAQAGNVD----ALYELIWEDAYLLD---QIDRVPFVDTPLHIAASM---GHVNFALEIMRLKPSFAR------ 65 (151)
Q Consensus 2 ~~~l~~a~~~g~~~----~v~~ll~~~~~~~~---~~~~~~~~~t~l~~a~~~---~~~~~~~~ll~~~~~~~~------ 65 (151)
.||||.|++.|+.+ +++++++.+.++.. ..+. .|.||||+|+.. |+.+++++|++.+++...
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~--~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGS--TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTT--TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCC--CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 48999999999997 55677778887643 1343 499999999999 999999999998866521
Q ss_pred ----cCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCC-------------CCCcccc----cCHHHHHHHHHh-
Q 048410 66 ----KQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGRE-------------GVTPLHY----GNVDLLYKFLAA- 123 (151)
Q Consensus 66 ----~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-------------~~t~l~~----~~~~~~~~ll~~- 123 (151)
..|..|.||||+|+..|+.+++++|++.|++ ++..+.. |.|||+. ++.+++++|+..
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 1246799999999999999999999999999 8888876 9999998 999999777775
Q ss_pred -CCCCcccccccCCCccccccc
Q 048410 124 -CPESILQVTIYFPILLPFSSK 144 (151)
Q Consensus 124 -~~~~~~~~~~~g~t~l~~a~~ 144 (151)
.|++++.+|..|.||||+|++
T Consensus 160 ~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 160 HQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHH
T ss_pred ccCCCcCccCCCCCCHHHHHHH
Confidence 799999999999999999997
No 47
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=2.8e-26 Score=151.17 Aligned_cols=138 Identities=19% Similarity=0.129 Sum_probs=60.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
||||.|+..|+.+++++|++.|.++ ...+. .|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..|
T Consensus 41 t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 116 (285)
T 1wdy_A 41 TPLHNAVQMSREDIVELLLRHGADP-VLRKK--NGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYG 116 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTT
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCC-cccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhC
Confidence 3444444444444444444444333 11121 1444444444444444444444444433 233444444444444444
Q ss_pred CHHHHHHHHhhcccccccc----------CCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 83 HTQMVLRLIDVDRNLVRVQ----------GREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~----------~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
+.+++++|++.|++ ++.. +..|.|||+. ++.+++++|+...|.+++..+..|.||+|.|+..
T Consensus 117 ~~~~~~~Ll~~g~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 192 (285)
T 1wdy_A 117 KVKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 192 (285)
T ss_dssp CHHHHHHHHHTTCC-TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHC
T ss_pred CHHHHHHHHHhCCC-cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 44444444444444 3333 3334444444 4444444444444444444445555555544443
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=5.1e-27 Score=154.52 Aligned_cols=143 Identities=16% Similarity=0.139 Sum_probs=120.4
Q ss_pred CHHHHHHHHc---CCHHHHHHHHHhChhhh------hh--hcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCC-
Q 048410 2 SHYVILAAQA---GNVDALYELIWEDAYLL------DQ--IDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQ- 69 (151)
Q Consensus 2 ~~~l~~a~~~---g~~~~v~~ll~~~~~~~------~~--~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~- 69 (151)
.||||.|+.. |+.+++++|++.|++.. +. .+.+..|.||||+|+..|+.+++++|++.|+++ +..+.
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~ 133 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANG 133 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCS
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-Cccccc
Confidence 4899999987 99999999999987631 11 111235899999999999999999999999887 55565
Q ss_pred -------------CCCcHHHHHHhcCCHHHHHHHHh---hccccccccCCCCCCcccc----cC---------HHHHHHH
Q 048410 70 -------------YGFSPLHLALQNSHTQMVLRLID---VDRNLVRVQGREGVTPLHY----GN---------VDLLYKF 120 (151)
Q Consensus 70 -------------~~~t~L~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~t~l~~----~~---------~~~~~~l 120 (151)
.|.||||+|+..|+.+++++|++ .|++ ++.++..|.||||+ ++ .++++.|
T Consensus 134 ~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~L 212 (273)
T 2pnn_A 134 DFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEI 212 (273)
T ss_dssp GGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHH
Confidence 79999999999999999999999 8898 99999999999998 45 6788666
Q ss_pred HHhCCCCcc-------cccccCCCccccccccCC
Q 048410 121 LAACPESIL-------QVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 121 l~~~~~~~~-------~~~~~g~t~l~~a~~~~~ 147 (151)
+. .|++++ .+|..|.||||+|+++..
T Consensus 213 l~-~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 213 LI-LGAKLHPTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp HH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HH-hhhhcccccccccccCCCCCCHHHHHHHhCh
Confidence 65 477775 479999999999998764
No 49
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=2.9e-26 Score=156.40 Aligned_cols=141 Identities=16% Similarity=0.153 Sum_probs=117.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHh----Chhhhhh----------------hcCCCCCCchHHHHHhcC--CHHHHHHHHHhC
Q 048410 3 HYVILAAQAGNVDALYELIWE----DAYLLDQ----------------IDRVPFVDTPLHIAASMG--HVNFALEIMRLK 60 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~----~~~~~~~----------------~~~~~~~~t~l~~a~~~~--~~~~~~~ll~~~ 60 (151)
||||.|+..|+.+++++|++. +..+... .+. .|.||||+|+..| +.+++++|++.+
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~t~L~~A~~~g~~~~~~v~~Ll~~g 163 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHC--KGQTALHWCVGLGPEYLEMIKILVQLG 163 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEE--SCCCHHHHHHHSCGGGHHHHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCC--CCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 567777777777777777776 4433210 332 3899999999999 999999999999
Q ss_pred CCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhcccc----ccccCCCCCCcccc----cCHHHHHHHHHhCCCCccccc
Q 048410 61 PSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNL----VRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVT 132 (151)
Q Consensus 61 ~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~----~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~ 132 (151)
+++ +..|..|.||||+|+..|+.+++++|++.|++. ++..+..|.|||++ ++.+++++|+. .|++++.+|
T Consensus 164 a~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~~~~d 241 (364)
T 3ljn_A 164 ASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE-MGIDVNMED 241 (364)
T ss_dssp CCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT-TTCCTTCCC
T ss_pred CCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCC
Confidence 887 677999999999999999999999999987763 67788899999998 99999966665 689999999
Q ss_pred ccCCCccccccccCC
Q 048410 133 IYFPILLPFSSKFSP 147 (151)
Q Consensus 133 ~~g~t~l~~a~~~~~ 147 (151)
..|.||||+|+++..
T Consensus 242 ~~g~tpL~~A~~~g~ 256 (364)
T 3ljn_A 242 NEHTVPLYLSVRAAM 256 (364)
T ss_dssp TTSCCHHHHHHHTCC
T ss_pred CCCCCHHHHHHHhCh
Confidence 999999999998753
No 50
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=1.8e-26 Score=157.43 Aligned_cols=139 Identities=19% Similarity=0.193 Sum_probs=98.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccc-----------------
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFAR----------------- 65 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~----------------- 65 (151)
||||.|+..|+.++|++|++.|.++ +..+. .|.||||+|+..|+.+++++|++.+++...
T Consensus 22 t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~ 98 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRRLIETGVSP-TIQNR--FGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTD 98 (364)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT--TCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCc-cccCC--CCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHH
Confidence 6777777777777777777777665 33332 367777777777777777777776653311
Q ss_pred -----------------c-----------------CCCCCCcHHHHHHhcC--CHHHHHHHHhhccccccccCCCCCCcc
Q 048410 66 -----------------K-----------------QNQYGFSPLHLALQNS--HTQMVLRLIDVDRNLVRVQGREGVTPL 109 (151)
Q Consensus 66 -----------------~-----------------~~~~~~t~L~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~t~l 109 (151)
. .+..|.||||+|+..| +.+++++|++.|++ ++..+..|.|||
T Consensus 99 ~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L 177 (364)
T 3ljn_A 99 LVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPL 177 (364)
T ss_dssp HHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHH
T ss_pred HHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHH
Confidence 1 4556778888888887 77888888888777 777777888888
Q ss_pred cc----cCHHHHHHHHHhCCCC-----cccccccCCCccccccccC
Q 048410 110 HY----GNVDLLYKFLAACPES-----ILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 110 ~~----~~~~~~~~ll~~~~~~-----~~~~~~~g~t~l~~a~~~~ 146 (151)
++ ++.+++++|+.. |++ ++..+..|.||||+|+++.
T Consensus 178 ~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~~g 222 (364)
T 3ljn_A 178 MRAMEFRNREALDLMMDT-VPSKSSLRLDYANKQGNSHLHWAILIN 222 (364)
T ss_dssp HHHHHTTCHHHHHHHHHH-CSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred HHHHHcCCHHHHHHHHhc-ccccccccccccCCCCCcHHHHHHHcC
Confidence 77 777888666654 445 7777778888888877654
No 51
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=1.8e-26 Score=160.63 Aligned_cols=138 Identities=25% Similarity=0.327 Sum_probs=108.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
||||.|+..|+.+++++|++.++++ +..+. .|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..|
T Consensus 247 t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~--~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g 322 (437)
T 1n11_A 247 TPLHLAAQEGHAEMVALLLSKQANG-NLGNK--SGLTPLHLVAQEGHVPVADVLIKHGVMV-DATTRMGYTPLHVASHYG 322 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCT-TCCCT--TCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCSSCCCHHHHHHHSS
T ss_pred CHHHHHHHCCCHHHHHHHHhcCCCC-CCCCC--CCCCHHHHHHHcCCHHHHHHHHhCCccC-CCCCCCCCCHHHHHHHcC
Confidence 6777777777777777777777665 33332 3778888888888888888888887776 566788888888888888
Q ss_pred CHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccC
Q 048410 83 HTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 146 (151)
+.+++++|++.|++ ++.++..|.|||++ ++.+++++|+. .|++.+.++..|.||+++|.+++
T Consensus 323 ~~~~v~~Ll~~gad-~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~-~ga~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 323 NIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLK-NGASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp CSHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSCCCCSSSCCHHHHHHHTT
T ss_pred cHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHCChHHHHHHHHH-CcCCCCCCCCCCCCHHHHHHHcC
Confidence 88888888888888 88888888888887 88888866555 57888888888888888887764
No 52
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=2.8e-26 Score=151.12 Aligned_cols=141 Identities=19% Similarity=0.116 Sum_probs=124.9
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
+++|+.|++.|+.+++++|++.++++....+. .|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEE--GGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCC--CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHc
Confidence 47999999999999999999999887444343 4899999999999999999999999887 66789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccc----------cccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQV----------TIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~----------~~~g~t~l~~a~~~~~ 147 (151)
|+.+++++|++.|++ ++..+..|.|||+. ++.+++++|+. .|++.+.. +..|.||||+|++..+
T Consensus 83 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 160 (285)
T 1wdy_A 83 GSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYK-RGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 160 (285)
T ss_dssp TCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTC
T ss_pred CCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHH-hCCCcccccccHHHHHhhccCCCcHHHHHHHcCC
Confidence 999999999999999 89999999999998 99999966666 46777776 7789999999987653
No 53
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=4.2e-27 Score=152.36 Aligned_cols=134 Identities=18% Similarity=0.116 Sum_probs=93.8
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.|||+.|++.|+.+.++.|+++|.++... . .+.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~---~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKFN-P---LPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHH
T ss_pred cccCchhhhhhhHHHHHHHhccCCCcccC-c---hhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHc
Confidence 48999999999999999999999887433 2 3789999999999999999999999876 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCC-Cccccc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFP-ILLPFS 142 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~-t~l~~a 142 (151)
|+.+++++|++.|++ ++.+|..|.||||+ ++.++++.|+. .|++++.++..|. ||+|+|
T Consensus 81 g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVE-SGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp TCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCSSSCCCHHHHC
T ss_pred CCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcceecCCCCcchHHHH
Confidence 999999999999999 99999999999998 89999966665 5889999988877 999998
No 54
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=2.4e-26 Score=160.03 Aligned_cols=140 Identities=26% Similarity=0.324 Sum_probs=108.3
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.++|++|++.|.++ +..+. .|.||||+|+..|+.+++++|++.+++. +..+..|.||||+|+..
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~--~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 90 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASP-NVSNV--KVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARI 90 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCSSS--CCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCC--CCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHC
Confidence 47888888888888888888888765 33332 3788888888888888888888888776 56678888888888888
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
|+.+++++|++.|++ ++..+..|.|||+. ++.++++.|+.. +++.+..+..|.||||+|+++++
T Consensus 91 g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~g~ 158 (437)
T 1n11_A 91 GHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEK-EASQACMTKKGFTPLHVAAKYGK 158 (437)
T ss_dssp TCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCcCCCCCCCCHHHHHHHcCC
Confidence 888888888888888 77888888888887 777777666553 55666666777777777776543
No 55
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=2e-26 Score=142.21 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=111.4
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.|.++ +..+. .|.||||+|+..++.+++++|++.+.+. +..+..|.||||+|+..
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 112 (172)
T 3v30_A 37 FTPLIWASAFGEIETVRFLLEWGADP-HILAK--ERESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRG 112 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCT--TCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcc--cCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 47999999999999999999999886 44443 4899999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPIL 138 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~ 138 (151)
++.+++++|++.|++ ++.++..|.||+++ ++.++++.|+. .+++...++..|.||
T Consensus 113 ~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~-~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 113 NHVKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIEN-HILKLFQSNLVPADP 171 (172)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-HHHHHSCC-------
T ss_pred CCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHhCcHHHHHHHHH-HHHHHhcccCCCCCC
Confidence 999999999999999 99999999999998 99999966665 466777777777776
No 56
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=8.9e-26 Score=134.44 Aligned_cols=116 Identities=27% Similarity=0.369 Sum_probs=104.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.|+||.|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.+++. +..|..|.||||+|+..
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADV-NAKDE--YGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHc
Confidence 47999999999999999999999886 44443 4899999999999999999999999887 67788999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHH
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLA 122 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~ 122 (151)
++.+++++|++.|++ ++..+..|.||+++ ++.+++++|+.
T Consensus 91 ~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 91 GHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 999999999999999 89999999999998 89999976665
No 57
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.3e-26 Score=150.07 Aligned_cols=143 Identities=15% Similarity=0.115 Sum_probs=122.5
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.|+||.|+..|+.+++++|++.++++ +..+. .|.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 38 LALLLDSSLEGEFDLVQRIIYEVDDP-SLPND--EGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASC 113 (239)
T ss_dssp HHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCT--TSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHT
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 37999999999999999999999876 44453 4999999999999999999999999887 77899999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCC-Ccccc------cCHHHHHHHHHhCCCCcccc---------cccCCCcccccccc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGV-TPLHY------GNVDLLYKFLAACPESILQV---------TIYFPILLPFSSKF 145 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~-t~l~~------~~~~~~~~ll~~~~~~~~~~---------~~~g~t~l~~a~~~ 145 (151)
|+.+++++|++.|++ ++..+..+. ||++. ++.++++.|+.. |++.+.. +..+.++.+++.+.
T Consensus 114 ~~~~~v~~Ll~~ga~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~-~a~~~~~~~~~~~al~d~~~~~~~eLa~~~ 191 (239)
T 1ycs_B 114 NNVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV-QEKMGIMNKGVIYALWDYEPQNDDELPMKE 191 (239)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH-HHHTTTTGGGEEEESSCBCCSSTTBCCBCS
T ss_pred CCHHHHHHHHHcCCC-cceecCCCCcchHHHHHHhhhccHHHHHHHHHh-hhcccccccceEEEEeccCCCCCCcccccC
Confidence 999999999999999 888888876 99987 778999666664 5666554 45578888888877
Q ss_pred CCCcc
Q 048410 146 SPIFS 150 (151)
Q Consensus 146 ~~~~~ 150 (151)
+++.+
T Consensus 192 G~~i~ 196 (239)
T 1ycs_B 192 GDCMT 196 (239)
T ss_dssp SCEEE
T ss_pred CCEEE
Confidence 76543
No 58
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=8.4e-27 Score=153.38 Aligned_cols=139 Identities=22% Similarity=0.210 Sum_probs=107.7
Q ss_pred HHHHHHHHcCCHH-HHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 3 HYVILAAQAGNVD-ALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 3 ~~l~~a~~~g~~~-~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
+||+.|+..++.+ +++.|++.|.++ +..+. .|.||||+|+..|+.+++++|++.++++ +..+..|.||+++|+..
T Consensus 54 t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~--~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~ 129 (269)
T 4b93_B 54 HPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQ--DGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQ 129 (269)
T ss_dssp ---------------------CCCCT-TCCCT--TSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred CHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCC--CCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCcccccccc
Confidence 6889999887764 789999999887 55553 4999999999999999999999999887 67789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
++.+++++|++.|++ ++.++..|.|||++ ++.++++.|+. .|++++..+..|.||||+|++++.
T Consensus 130 ~~~~~~~~Ll~~g~~-~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~-~gadvn~~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 130 GHFQVVKCLLDSNAK-PNKKDLSGNTPLIYACSGGHHELVALLLQ-HGASINASNNKGNTALHEAVIEKH 197 (269)
T ss_dssp TCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCGGGHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred ChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCccccCCCcHHHHHHHcCC
Confidence 999999999999999 99999999999998 99999966665 689999999999999999998764
No 59
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.94 E-value=2.3e-26 Score=157.50 Aligned_cols=108 Identities=20% Similarity=0.182 Sum_probs=66.2
Q ss_pred CCchHHHHHhcC---CHHHHHHHHHhCCCccc-------cCCCCCCcHHHHHHhcCCHHHHHHHHhhc-cccccccCCCC
Q 048410 37 VDTPLHIAASMG---HVNFALEIMRLKPSFAR-------KQNQYGFSPLHLALQNSHTQMVLRLIDVD-RNLVRVQGREG 105 (151)
Q Consensus 37 ~~t~l~~a~~~~---~~~~~~~ll~~~~~~~~-------~~~~~~~t~L~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~ 105 (151)
|.||||+|+..+ +.+++++|++.+.+... ..+..|.||||+|+..|+.+++++|++.+ ++ ++..+..|
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~n~~d~~g 313 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN-KDKQDEDG 313 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC-TTCCCTTC
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC-ccCcCCCC
Confidence 556666655555 55566666666555421 13445666666666666666666666665 44 66666666
Q ss_pred CCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccC
Q 048410 106 VTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 106 ~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 146 (151)
.|||++ ++.+++++|+. .|++++.+|..|.||+|+|+++.
T Consensus 314 ~TpL~~A~~~g~~~iv~~Ll~-~gad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 314 KTPIMLAAQEGRIEVVMYLIQ-QGASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCSSSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHH-cCCCccCCCCCCCCHHHHHHHcC
Confidence 777666 66666644444 46666666666777777666654
No 60
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=7.1e-26 Score=145.97 Aligned_cols=140 Identities=19% Similarity=0.182 Sum_probs=108.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
++|+.|+..|+.+++++|++.|.++ ...+. .|.||||+|+..|+.+++++|++.++......+..|.||||+|+..+
T Consensus 11 ~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 11 WDIVKATQYGIYERCRELVEAGYDV-RQPDK--ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp CCHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred hHHHHHHHcCChHHHHHHHHcCCCc-CCCCC--CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC
Confidence 5688888888888888888888765 33332 37888888888888888888888887775555556888888888888
Q ss_pred CHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 83 HTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
+.+++++|++.|++ ++..+..|.|||+. ++.+++++|+. .|++++..+..|.||+|.|+....
T Consensus 88 ~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 88 HLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIA-KGQDVDMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred CHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHh-cCCCccccCCCCCcHHHHHHHhCC
Confidence 88888888888887 77788888888887 77888866655 467788888888888888875443
No 61
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=6.5e-27 Score=155.07 Aligned_cols=138 Identities=14% Similarity=0.061 Sum_probs=121.0
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCC-CcHHHHHHh
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYG-FSPLHLALQ 80 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~t~L~~a~~ 80 (151)
.||||.|+..|+.+++++|++.|+++ +..+. .|.||||+|+..|+.+++++|++.|+++ +..+..| .||||+|+.
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~ 138 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLDD-SQFDD--KGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVM 138 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC--CCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHH
Confidence 47999999999999999999999986 44443 4899999999999999999999999887 6778888 799999999
Q ss_pred cCCHHHHHHHHhhccccccccCC-CCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCc-cccccccCC
Q 048410 81 NSHTQMVLRLIDVDRNLVRVQGR-EGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPIL-LPFSSKFSP 147 (151)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~~~-~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~-l~~a~~~~~ 147 (151)
.|+.+++++|++.|+. . .+. .|.|||+. ++.+++++|+.. |++++.++..|.|| ||+|+++..
T Consensus 139 ~~~~~~v~~Ll~~g~~-~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~~L~~A~~~~~ 207 (285)
T 3kea_A 139 LNDVSIVSYFLSEIPS-T--FDLAILLSCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFIPDIKLAIDNKD 207 (285)
T ss_dssp TTCHHHHHHHHTTSCT-T--CCCSTHHHHHHHHHHTTCHHHHHHHHHH-HHHTCTTCCCBCCTTHHHHHHHTC
T ss_pred cCCHHHHHHHHhCCCc-c--ccccCCccHHHHHHHcChHHHHHHHHHc-CCCCCcccCCCCChHHHHHHHcCC
Confidence 9999999999999887 3 233 88999998 999999777765 88999999999998 999987653
No 62
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=2.7e-26 Score=136.72 Aligned_cols=116 Identities=19% Similarity=0.216 Sum_probs=104.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCC-CCcHHHHHHh
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQY-GFSPLHLALQ 80 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~t~L~~a~~ 80 (151)
.||||.|++.|+.+++++|++.+.++ +..+. .|.||||+|+. ++.+++++|++.++++ +..+.. |.||||+|+.
T Consensus 13 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~ 87 (136)
T 1d9s_A 13 DAGLATAAARGQVETVRQLLEAGADP-NALNR--FGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVHDAAR 87 (136)
T ss_dssp SCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCC--CCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHHHHHH
Confidence 58999999999999999999999876 44443 48999999999 9999999999999887 677888 9999999999
Q ss_pred cCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHh
Q 048410 81 NSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAA 123 (151)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~ 123 (151)
.++.+++++|++.|++ ++.++..|.|||++ ++.+++++|+..
T Consensus 88 ~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 88 EGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp HTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999 99999999999998 899999777764
No 63
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=1.2e-25 Score=152.00 Aligned_cols=137 Identities=23% Similarity=0.205 Sum_probs=88.3
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCcc-----------------
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFA----------------- 64 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~----------------- 64 (151)
+|+|+.|++.|+.++|++|++.|++++...+. .|.||||+|+..|+.+++++|++.|+++.
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~--~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEE--GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT--TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCC--CCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 47899999999999999999999887433222 37899999999999999999988876531
Q ss_pred ---------------ccCCCCCCcHHHHHHhcCCHHHHHHHHhhcccccccc----------CCCCCCcccc----cCHH
Q 048410 65 ---------------RKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQ----------GREGVTPLHY----GNVD 115 (151)
Q Consensus 65 ---------------~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~----------~~~~~t~l~~----~~~~ 115 (151)
+..|..|.||+++|+..|+.++++++++.|++ ++.. +..|.|||+. ++.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~-~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCC-cchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 22345556666666666666666666655554 3322 2235555555 5555
Q ss_pred HHHHHHHhCCCCcccccccCCCcccc
Q 048410 116 LLYKFLAACPESILQVTIYFPILLPF 141 (151)
Q Consensus 116 ~~~~ll~~~~~~~~~~~~~g~t~l~~ 141 (151)
+++.||...|++++.++..|.|+++.
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~~ 208 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALIH 208 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHHH
T ss_pred HHHHHHhccCCCcCccCCCCCcHHHH
Confidence 55555554555555555555555544
No 64
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=1.1e-25 Score=152.30 Aligned_cols=91 Identities=23% Similarity=0.265 Sum_probs=68.7
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.|.++ +..+. .|.||||+|+..|+.+++++|++.++++ +..+..|.||||+|+..
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 134 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGADV-HAKDK--GGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASK 134 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CccCC--CCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHc
Confidence 46888888888888888888887765 44442 3778888888888888888888887776 55677788888888888
Q ss_pred CCHHHHHHHHhhccc
Q 048410 82 SHTQMVLRLIDVDRN 96 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~ 96 (151)
|+.+++++|++.|++
T Consensus 135 ~~~~~v~~Ll~~g~~ 149 (351)
T 3utm_A 135 NRVEVCSLLLSHGAD 149 (351)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 877777777776655
No 65
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=5.2e-25 Score=134.98 Aligned_cols=116 Identities=24% Similarity=0.297 Sum_probs=105.4
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.+.++ +..|..|.||||+|+..
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 118 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQHGADV-HAKDK--GGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAK 118 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHT
T ss_pred CCHHHHHHHcChHHHHHHHHhcCCCC-CccCC--CCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHc
Confidence 38999999999999999999999886 44443 4899999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc---cCHHHHHHHHH
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY---GNVDLLYKFLA 122 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~---~~~~~~~~ll~ 122 (151)
++.+++++|++.|++ ++.++..|.||+++ ++.+++++|+.
T Consensus 119 ~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~a~~~~~~i~~~L~~ 161 (165)
T 3twr_A 119 GKYEICKLLLQHGAD-PTKKNRDGNTPLDLVKDGDTDIQDLLRG 161 (165)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCTGGGSCTTCHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCC-CcccCCCCCChhHhHhcCChHHHHHHhh
Confidence 999999999999999 99999999999998 88899955554
No 66
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=1.7e-26 Score=150.98 Aligned_cols=144 Identities=17% Similarity=0.112 Sum_probs=118.8
Q ss_pred HHHHHHHHcCCHHHHHHHHH----hChhhhhhhc-CCCCCCchHHHHH---hcCCHHHHHHHHHhCCCc----------c
Q 048410 3 HYVILAAQAGNVDALYELIW----EDAYLLDQID-RVPFVDTPLHIAA---SMGHVNFALEIMRLKPSF----------A 64 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~----~~~~~~~~~~-~~~~~~t~l~~a~---~~~~~~~~~~ll~~~~~~----------~ 64 (151)
++||.|++.|+.+.++.|++ .+..+..... ....|.||||+|+ ..|+.+++++|++.+.+. .
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 86 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPF 86 (260)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCB
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccc
Confidence 78999999999996655555 7777643321 1124999999999 679999999999987432 1
Q ss_pred ccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccC--------------CCCCCcccc----cCHHHHHHHHHh--C
Q 048410 65 RKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQG--------------REGVTPLHY----GNVDLLYKFLAA--C 124 (151)
Q Consensus 65 ~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~--------------~~~~t~l~~----~~~~~~~~ll~~--~ 124 (151)
...|..|.||||+|+..|+.+++++|++.|++ ++..+ ..|.||||. ++.+++++|+.. .
T Consensus 87 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 165 (260)
T 3jxi_A 87 RDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK 165 (260)
T ss_dssp CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 33455899999999999999999999999999 88888 689999998 999999777774 7
Q ss_pred CCCcccccccCCCccccccccCC
Q 048410 125 PESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 125 ~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
|++++.+|..|.||||+|+++.+
T Consensus 166 ga~~~~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 166 QADLRRQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCC
T ss_pred CCCCcccCCCCCcHHHHHHHhcc
Confidence 89999999999999999996543
No 67
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=9.9e-25 Score=140.78 Aligned_cols=141 Identities=18% Similarity=0.142 Sum_probs=118.1
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhh-----hhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCC-CCCcHH
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYL-----LDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQ-YGFSPL 75 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~-----~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~t~L 75 (151)
.||||.|+..|+.+++++|++.++.. ....+ ..|.||||+|+..|+.+++++|++.|+++ +..+. .|.|||
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL 155 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN--YNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTAL 155 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCC--TTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHH
Confidence 47999999999999999999998642 23333 24899999999999999999999999988 55565 899999
Q ss_pred HHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcc--cccccCCCccccccccCC
Q 048410 76 HLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESIL--QVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 76 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~--~~~~~g~t~l~~a~~~~~ 147 (151)
|+|+..|+.+++++|++.|++ ++.++..|.||+++ ++.+++++|+. .|++.. ..+..|.|+.+.+.....
T Consensus 156 ~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~~ 231 (236)
T 1ikn_D 156 HLAVDLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQ-LTLENLQMLPESEDEESYDTESEFTE 231 (236)
T ss_dssp HHHHHTTCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHT-TSCGGGSSCCCCCTTTCCCCC-----
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCcccCCCCCHHHHHHccCchHHHHHHHH-cchhhhhcCCccchHHHHhhhccccc
Confidence 999999999999999999999 99999999999998 89999966665 566555 567889999988776543
No 68
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=1.2e-25 Score=149.94 Aligned_cols=134 Identities=13% Similarity=0.073 Sum_probs=112.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhh-----hcCCCCCCchHHHHHhc---CCHHHHHHHHHhCCCccccCCCCCCcH
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQ-----IDRVPFVDTPLHIAASM---GHVNFALEIMRLKPSFARKQNQYGFSP 74 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~-----~~~~~~~~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~t~ 74 (151)
++|+.|++.|+.+.++.+++.++++... .+ ..|.||||+|+.. ++.+++++|++.|+++ +..|..|.||
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~--~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~Tp 229 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQ--APEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTA 229 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSC--SCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccC--CCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCH
Confidence 5799999999999999999999887442 23 2489999999997 8999999999999887 6779999999
Q ss_pred HHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 75 LHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 75 L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
||+|+..|+.+++++|++.|++ ++.+|..|.|||++ ++.+++++|+.. |++ .|.||||+|++++-
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~-ga~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQA-QAG------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHH-HHH------TTSSCCC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-cCC------CCCChhHHHHhcCC
Confidence 9999999999999999999999 99999999999998 999999777664 332 68999999998753
No 69
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=8e-25 Score=135.86 Aligned_cols=127 Identities=23% Similarity=0.260 Sum_probs=111.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.|.++ +..+. .|.||||+|+..++.+++++|++.+++. +..|..|.||||+|+..
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~ 115 (179)
T 3f6q_A 40 FSPLHWACREGRSAVVEMLIMRGARI-NVMNR--GDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFW 115 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 47999999999999999999999886 44443 4899999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCccccccc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIY 134 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~ 134 (151)
++.+++++|++.|++ ++..+..|.||+++ ++.+++ .+|...|++.+..+..
T Consensus 116 ~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~-~~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 116 GQDQVAEDLVANGAL-VSICNKYGEMPVDKAKAPLRELLR-ERAEKMGQNLNRIPYK 170 (179)
T ss_dssp TCHHHHHHHHHTTCC-SSBCCTTSCCGGGGSCHHHHHHHH-HHHHHTTCCCSCBCCC
T ss_pred CCHHHHHHHHHCCCC-cchhccCCCCcHHHHHHHHHHHHH-HHHHHhhcCcccCCcc
Confidence 999999999999999 99999999999998 667777 5555567888765543
No 70
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=1.3e-25 Score=144.67 Aligned_cols=105 Identities=28% Similarity=0.363 Sum_probs=71.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
||||.|+..|+.+++++|++.++......+. .|.|||++|+..++.+++++|++.+.+. +..+..|.||||+|+..+
T Consensus 44 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~ 120 (240)
T 3eu9_A 44 TLLHWAAINNRIDLVKYYISKGAIVDQLGGD--LNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFG 120 (240)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCBTT--TTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CHHHHHHHhCCHHHHHHHHHcCCcchhhcCC--cCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcC
Confidence 5777777777777777777777765433332 2667777777777777777777776665 455667777777777777
Q ss_pred CHHHHHHHHhhccccccccCCCCCCcccc
Q 048410 83 HTQMVLRLIDVDRNLVRVQGREGVTPLHY 111 (151)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~~~~t~l~~ 111 (151)
+.+++++|++.|++ ++..+..|.||++.
T Consensus 121 ~~~~~~~Ll~~~~~-~~~~~~~g~t~l~~ 148 (240)
T 3eu9_A 121 HTSIVAYLIAKGQD-VDMMDQNGMTPLMW 148 (240)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred HHHHHHHHHhcCCC-ccccCCCCCcHHHH
Confidence 77777777777666 55555555555544
No 71
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=6.3e-25 Score=128.60 Aligned_cols=111 Identities=18% Similarity=0.269 Sum_probs=92.2
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
+++||.|+..|+.+++++|++.++++ +..+. .|.||||+|+..++.+++++|++.++++ +..|..|.||||+|+..
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGEDV-NRTLE--GGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYE 83 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCT--TSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCc-CccCC--CCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHc
Confidence 47889999999999999999888875 44443 3889999999999999999999888876 66788889999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc-cCHHHH
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY-GNVDLL 117 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~-~~~~~~ 117 (151)
++.+++++|++.|++ ++.++..|.||+++ ...++.
T Consensus 84 ~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~ 119 (123)
T 3aaa_C 84 GHVSCVKLLLSKGAD-KTVKGPDGLTAFEATDNQAIK 119 (123)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCCHHHH
T ss_pred CCHHHHHHHHHcCCC-CCCcCCCCCCHHHHhCCHHHH
Confidence 999999999988888 88888889999888 555544
No 72
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=1.2e-24 Score=127.59 Aligned_cols=117 Identities=29% Similarity=0.484 Sum_probs=106.4
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|++.|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.+.+. +..+..|.||||+|+..
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~--~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDK--NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCC--CCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHc
Confidence 58999999999999999999999876 44443 4899999999999999999999999887 67789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHh
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAA 123 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~ 123 (151)
++.+++++|++.|++ ++.++..|.||+++ ++.+++++|+..
T Consensus 79 ~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 79 GHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 999999999999999 89999999999998 899999777765
No 73
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=3e-25 Score=152.02 Aligned_cols=141 Identities=14% Similarity=0.138 Sum_probs=125.5
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhC---CCccccCCCCCCcHHHHH
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLK---PSFARKQNQYGFSPLHLA 78 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~---~~~~~~~~~~~~t~L~~a 78 (151)
.||||.|+..|+.++|++|++.|+++ ...+. .|.||||+|+..|+.+++++|++.+ .+. +..+..|.||||+|
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L~~A 242 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADP-TIYNK--SERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTALMIV 242 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT--TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCC-cccCC--CCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHHHHH
Confidence 58999999999999999999999987 44443 4899999999999999999999977 454 66789999999999
Q ss_pred HhcC---CHHHHHHHHhhccccccc--------cCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcccccc
Q 048410 79 LQNS---HTQMVLRLIDVDRNLVRV--------QGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSS 143 (151)
Q Consensus 79 ~~~~---~~~~~~~ll~~~~~~~~~--------~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~ 143 (151)
+..+ +.+++++|++.|++ ++. .+..|.|||+. ++.+++++|+...+++++.+|..|.||||+|+
T Consensus 243 ~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~ 321 (373)
T 2fo1_E 243 AHNEGRDQVASAKLLVEKGAK-VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAA 321 (373)
T ss_dssp HHSCSTTHHHHHHHHHHHTCC-SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHH
T ss_pred HHhCCcchHHHHHHHHHCCCC-cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHH
Confidence 9988 89999999999988 665 56789999998 99999999998888999999999999999999
Q ss_pred ccCC
Q 048410 144 KFSP 147 (151)
Q Consensus 144 ~~~~ 147 (151)
++..
T Consensus 322 ~~g~ 325 (373)
T 2fo1_E 322 QEGR 325 (373)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 7653
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=1e-24 Score=132.16 Aligned_cols=114 Identities=27% Similarity=0.340 Sum_probs=103.9
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.|.++ +..+. .|.||||+|+..++.+++++|++.++++ +..+..|.||||+|+..
T Consensus 35 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 110 (153)
T 1awc_B 35 TSPLHLAAQYGHFSTTEVLLRAGVSR-DARTK--VDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEH 110 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCT--TCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC--CCCCHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 48999999999999999999999886 44443 4899999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHH
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKF 120 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~l 120 (151)
++.+++++|++.|++ ++.++..|.||+++ ++.+++++|
T Consensus 111 ~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 111 NHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999 99999999999998 889988554
No 75
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=1.3e-24 Score=147.04 Aligned_cols=138 Identities=21% Similarity=0.212 Sum_probs=122.5
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.++|+.|++.|+.+.|+.++.......+..+. .|.||||+|+..|+.+++++|++.|.++ +..+..|.||||+|+..
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDG--RKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCSST--TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHT
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCcccCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHC
Confidence 37899999999999999999875443345553 4899999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSK 144 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 144 (151)
|+.+++++|++.|++ ++..+..|.|||++ ++.+++++|+. .|++.+..+..|.+|++.++.
T Consensus 102 g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~~~l~~a~~ 166 (351)
T 3utm_A 102 GHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLS-HGADPTLVNCHGKSAVDMAPT 166 (351)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCSS
T ss_pred CCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCccccCCCCcchHHHhh
Confidence 999999999999999 99999999999998 99999966665 588999999999999998764
No 76
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=3e-24 Score=132.16 Aligned_cols=116 Identities=27% Similarity=0.346 Sum_probs=105.5
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.|.++ +..+. .|.||||+|+..++.+++++|++.+++. +..+..|.||||+|+..
T Consensus 48 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 123 (169)
T 2y1l_E 48 WTPLHLAAFNGHLEIVEVLLKNGADV-NAVDH--AGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMF 123 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 47999999999999999999999876 44443 4899999999999999999999999887 67789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHH
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLA 122 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~ 122 (151)
++.+++++|++.|++ ++.++..|.||+++ ++.+++++|++
T Consensus 124 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 124 GHLEIVEVLLKNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999 99999999999998 89999966664
No 77
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1.4e-24 Score=132.61 Aligned_cols=119 Identities=21% Similarity=0.241 Sum_probs=105.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+. |+.+++++|++.|.++ +..+. .|.||||+|+..++.+++++|++.+.++ +..+..|.||||+|+..
T Consensus 39 ~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 113 (162)
T 1ihb_A 39 RTALQVMKL-GNPEIARRLLLRGANP-DLKDR--TGFAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKE 113 (162)
T ss_dssp CCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred ccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHc
Confidence 479999999 9999999999999886 44443 4899999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPE 126 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~ 126 (151)
|+.+++++|++.|+..++..+..|.||+++ ++.+++++|+.. |+
T Consensus 114 ~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-GA 161 (162)
T 1ihb_A 114 GHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN-GA 161 (162)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-C-
T ss_pred CCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh-CC
Confidence 999999999999998568999999999998 899999666654 54
No 78
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=7.6e-25 Score=130.48 Aligned_cols=105 Identities=23% Similarity=0.289 Sum_probs=77.0
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.+.+. +..+..|.||||+|+..
T Consensus 11 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 86 (137)
T 3c5r_A 11 ETLLHIASIKGDIPSVEYLLQNGSDP-NVKDH--AGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDAAKN 86 (137)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHHHHc
Confidence 46777777777777777777777665 33332 3777777777777777777777777665 55677777777777777
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY 111 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~ 111 (151)
++.+++++|++.|++ ++.+|..|.||+++
T Consensus 87 ~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~ 115 (137)
T 3c5r_A 87 GHVDIVKLLLSYGAS-RNAVNIFGLRPVDY 115 (137)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCGGGG
T ss_pred CCHHHHHHHHHcCCC-CCCCCCCCCCHHHH
Confidence 777777777777777 77777777777777
No 79
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.92 E-value=1.9e-24 Score=135.51 Aligned_cols=117 Identities=17% Similarity=0.264 Sum_probs=107.2
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.++++ +..+. .|.||||+|+..++.+++++|++.++++ +..+..|.||||+|+..
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 144 (192)
T 2rfm_A 69 STALIWAVKNNRLGIAEKLLSKGSNV-NTKDF--SGKTPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKY 144 (192)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC--CCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHc
Confidence 47999999999999999999999886 44443 4899999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHh
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAA 123 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~ 123 (151)
++.+++++|++.|++ ++.++..|.||+++ ++.+++++|+..
T Consensus 145 ~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 145 GRSEIVKKLLELGAD-ISARDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp TCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 999999999999999 99999999999998 999999888764
No 80
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=1.5e-24 Score=142.71 Aligned_cols=136 Identities=16% Similarity=0.193 Sum_probs=106.4
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcC------------CCCCCchHHHHHhcCCHHHHHHHHH---hCCCcccc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDR------------VPFVDTPLHIAASMGHVNFALEIMR---LKPSFARK 66 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~------------~~~~~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~ 66 (151)
.||||.|+..|+.+++++|++.|+++ +..+. ...|.||||+|+..|+.+++++|++ .+.++ +.
T Consensus 102 ~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~ 179 (273)
T 2pnn_A 102 QTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI-SA 179 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc-ee
Confidence 48999999999999999999999887 33332 0138999999999999999999999 78877 67
Q ss_pred CCCCCCcHHHHHHhcCC---------HHHHHHHHhhcccccc-------ccCCCCCCcccc----cCHHHHHHHHHhCCC
Q 048410 67 QNQYGFSPLHLALQNSH---------TQMVLRLIDVDRNLVR-------VQGREGVTPLHY----GNVDLLYKFLAACPE 126 (151)
Q Consensus 67 ~~~~~~t~L~~a~~~~~---------~~~~~~ll~~~~~~~~-------~~~~~~~t~l~~----~~~~~~~~ll~~~~~ 126 (151)
.|..|.||||+|+..++ .+++++|++.|++ ++ .++..|.|||++ ++.+++++|+.....
T Consensus 180 ~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~-~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 180 RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK-LHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH-HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh-cccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 89999999999999888 7999999999998 75 589999999998 999999888876544
Q ss_pred CcccccccCCCccc
Q 048410 127 SILQVTIYFPILLP 140 (151)
Q Consensus 127 ~~~~~~~~g~t~l~ 140 (151)
+.......+.+|.+
T Consensus 259 dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 259 EPECRHAAAHHHHH 272 (273)
T ss_dssp --------------
T ss_pred CchhhhhhhhhccC
Confidence 66666566665543
No 81
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=5.6e-24 Score=130.59 Aligned_cols=117 Identities=15% Similarity=0.202 Sum_probs=106.7
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.++++ +..+..|.||||+|+..
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 112 (167)
T 3v31_A 37 FTPLMWAAAHGQIAVVEFLLQNGADP-QLLGK--GRESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHG 112 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT--TCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCC--CCCcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHc
Confidence 47999999999999999999999876 44443 4899999999999999999999999888 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHh
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAA 123 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~ 123 (151)
++.+++++|++.|++ ++..+..|.||+++ ++.+++++|+..
T Consensus 113 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 113 NHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 999999999999999 89999999999998 999999777764
No 82
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=2.5e-24 Score=145.45 Aligned_cols=144 Identities=23% Similarity=0.154 Sum_probs=120.1
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhc-------CCCCCCchHHHHHhcCCHHHHHHHHHh-CCCccccCCCCCCc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQID-------RVPFVDTPLHIAASMGHVNFALEIMRL-KPSFARKQNQYGFS 73 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~-------~~~~~~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t 73 (151)
.||++.|+..|+.++++++++.|+++..... ....|.||||+|+..|+.+++++|+++ |.++ +..+..|.+
T Consensus 126 ~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d~~g~t 204 (337)
T 4g8k_A 126 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRN 204 (337)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCCTTSCC
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccCCCCCc
Confidence 4799999999999999999999887532111 112478999999999999999999976 5665 777889999
Q ss_pred HHHHHHhcCC----HHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 74 PLHLALQNSH----TQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 74 ~L~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
++++++..+. ..++++|++.|++ ++.++..|.||||. ++.++++.|+...|++++.+|..|.||||+|+++
T Consensus 205 ~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 205 ALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL 283 (337)
T ss_dssp HHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHT
T ss_pred HHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHc
Confidence 9998776543 3578899999999 89999999999998 8899998888888999999999999999999987
Q ss_pred CC
Q 048410 146 SP 147 (151)
Q Consensus 146 ~~ 147 (151)
+.
T Consensus 284 g~ 285 (337)
T 4g8k_A 284 KL 285 (337)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 83
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=9.3e-25 Score=139.80 Aligned_cols=128 Identities=19% Similarity=0.134 Sum_probs=101.0
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHh-CCCccccCCCCCCcHHHHHHh
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRL-KPSFARKQNQYGFSPLHLALQ 80 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t~L~~a~~ 80 (151)
.|+||.|+..|+.+++++|++.+.++ +..+. .|.||||+|+..|+.+++++|++. +.+. +..|..|.||||+|+.
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVGV-NGLDK--AGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAAAW 149 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHHHH
T ss_pred ccccccccccCcHHHHHHHHhCCCCc-cccCC--CCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHHHH
Confidence 57999999999999999999999886 44443 499999999999999999999998 6666 7789999999999999
Q ss_pred cCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccC
Q 048410 81 NSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYF 135 (151)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g 135 (151)
.|+.+++++|++.|++ ++.++..|.||+++ +..++++.++ ..++.....+..+
T Consensus 150 ~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~-~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 150 KGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQ-GTDAVRTLSNAED 206 (222)
T ss_dssp HTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred cCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHh-ccchhhhccchhh
Confidence 9999999999999999 99999999999998 6777775444 4566666655443
No 84
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=6.6e-24 Score=144.79 Aligned_cols=141 Identities=17% Similarity=0.135 Sum_probs=107.6
Q ss_pred HHHHHHHHc-CCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 3 HYVILAAQA-GNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 3 ~~l~~a~~~-g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
++||.|+.. |+.++++.|++.|.++. ..+....|.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~Gadvn-~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAHGADVN-WVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHTTCCTT-CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred cHHHHHHHccCCHHHHHHHHHcCCCCC-ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 689999999 99999999999999874 3432234899999999999999999999999888 67899999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCC--CCcccccccCCCccccccccC
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACP--ESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~--~~~~~~~~~g~t~l~~a~~~~ 146 (151)
|+.+++++|++.|++ ++..|..|.|||++ ++.+++++|+.... .+....+..+.|+++++..+.
T Consensus 279 g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 279 GHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred CcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 999999999999999 99999999999998 99999987776532 233344567889998877664
No 85
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=6.5e-24 Score=126.43 Aligned_cols=107 Identities=24% Similarity=0.310 Sum_probs=99.1
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----
Q 048410 36 FVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY---- 111 (151)
Q Consensus 36 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~---- 111 (151)
.|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..++.+++++|++.|++ ++..+..|.|||++
T Consensus 9 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~ 86 (137)
T 3c5r_A 9 RGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLHDAAKN 86 (137)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHHHHHHc
Confidence 4899999999999999999999999887 67799999999999999999999999999999 99999999999998
Q ss_pred cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 112 GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 112 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
++.+++++|+. .|++++.+|..|.||+++|+..
T Consensus 87 ~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 87 GHVDIVKLLLS-YGASRNAVNIFGLRPVDYTDDE 119 (137)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCGGGGCCCH
T ss_pred CCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhc
Confidence 99999977665 5899999999999999998864
No 86
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=4.6e-23 Score=136.14 Aligned_cols=133 Identities=15% Similarity=0.155 Sum_probs=113.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhh---cCCCCCCchHHHHHhc---CCHHHHHHHHHhCCCccccCCCCCCcHHH
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQI---DRVPFVDTPLHIAASM---GHVNFALEIMRLKPSFARKQNQYGFSPLH 76 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~---~~~~~~~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~t~L~ 76 (151)
++|+.|+..|+.+.++.+++.|.++.... .....|.||||+|+.. ++.+++++|++.|+++ +.+|..|.||||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh 210 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHH
Confidence 57899999999999999999998864332 1113489999999999 8999999999999987 677999999999
Q ss_pred HHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccC
Q 048410 77 LALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 77 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 146 (151)
+|+..|+.+++++|++.|++ ++.+|..|.|||++ ++.++++.|+.... +.+++|.++.|.
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga---------~~~~~~~~v~~~ 274 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALS---------GRFNSHVHVEYE 274 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT---------TCCCSSCCCCCC
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC---------CCCCcceeeecc
Confidence 99999999999999999999 99999999999998 89999977776532 356667766654
No 87
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=1.6e-23 Score=127.18 Aligned_cols=114 Identities=24% Similarity=0.303 Sum_probs=103.5
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||. +..|+.+++++|++.|.++ +..+. .|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..
T Consensus 37 ~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 111 (156)
T 1bd8_A 37 KTALQV-MMFGSTAIALELLKQGASP-NVQDT--SGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQE 111 (156)
T ss_dssp CCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHH
T ss_pred CcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCC--CCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHh
Confidence 489999 9999999999999999886 44443 4999999999999999999999999887 67799999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHH
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLA 122 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~ 122 (151)
|+.+++++|++. ++ ++..+..|.||+++ ++.++++.|+.
T Consensus 112 ~~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 112 GHTAVVSFLAAE-SD-LHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp TCHHHHHHHHTT-SC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred ChHHHHHHHHhc-cC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 999999999998 77 89999999999998 99999977765
No 88
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=6.9e-24 Score=136.52 Aligned_cols=126 Identities=17% Similarity=0.111 Sum_probs=101.6
Q ss_pred HHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccc
Q 048410 17 LYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRN 96 (151)
Q Consensus 17 v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~ 96 (151)
++.|++.+..+.........+.|+|++|+..|+.+++++|++.++++ +..|..|.||||+|+..|+.+++++|++.|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 46788888876433333234778999999999999999999999887 67899999999999999999999999999999
Q ss_pred cccccCCCCCCcccc----cCHHHHHHHHHhCCCCccccc-ccCCCccccc--ccc
Q 048410 97 LVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVT-IYFPILLPFS--SKF 145 (151)
Q Consensus 97 ~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~-~~g~t~l~~a--~~~ 145 (151)
++..+..|.|||++ ++.+++++|+. .|++++..+ ..|.||||+| +..
T Consensus 80 -~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~g~tpL~~A~a~~~ 133 (229)
T 2vge_A 80 -VNSPDSHGWTPLHCAASCNDTVICMALVQ-HGAAIFATTLSDGATAFEKCDPYRE 133 (229)
T ss_dssp -TTCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCSSTTCCTGGGCCTTST
T ss_pred -CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCCCHHHHHHHHhc
Confidence 99999999999998 99999966665 688999886 6999999998 554
No 89
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=2.2e-24 Score=142.34 Aligned_cols=141 Identities=18% Similarity=0.176 Sum_probs=121.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhh-hhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHH--
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYL-LDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLAL-- 79 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~-- 79 (151)
+++|.|+..|+.+.++.+++.+.+. ++..+. .|.||||+|+..|+.+++++|++.++...+..+..|.||||+|+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~--~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADS--NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCC--CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 4567888889999999999887763 244443 49999999999999999999999998444788999999999999
Q ss_pred ---hcCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 80 ---QNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 80 ---~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
..++.+++++|++.|.. ....+..|.|||+. ++.++++.|+. .|++++.+|..|.||||+|++++.
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~-~gad~n~~d~~G~TpLh~A~~~g~ 228 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLA-CEADVNVQDDDGSTALMCACEHGH 228 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHCCC
Confidence 56889999999999988 88888999999998 99999966665 589999999999999999988653
No 90
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=2.8e-23 Score=146.95 Aligned_cols=129 Identities=12% Similarity=0.055 Sum_probs=106.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhh---hcCCCCCCchHHHHHh---cCCHHHHHHHHHhCCCccccCCCCCCcHHH
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQ---IDRVPFVDTPLHIAAS---MGHVNFALEIMRLKPSFARKQNQYGFSPLH 76 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~---~~~~~~~~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~ 76 (151)
+.|+.|+..|+.+.|+.|++.|++++.. .+....|.||||+|+. .|+.+++++|++.|+++ +..|..|.||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHH
Confidence 4699999999999999999999886433 1112349999999966 89999999999999988 778999999999
Q ss_pred HHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCccccccc
Q 048410 77 LALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIY 134 (151)
Q Consensus 77 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~ 134 (151)
+|+..|+.+++++|++.|++ ++.+|..|.|||++ ++.++++.|+ ..|++.+....+
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll-~~ga~~~~~~~h 272 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLE-QAQAGTFAFPLH 272 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHH-HTCC--------
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHH-HhCCCCCCCcce
Confidence 99999999999999999999 99999999999998 9999995555 467777764333
No 91
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=1.6e-23 Score=122.55 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=97.5
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----c
Q 048410 37 VDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----G 112 (151)
Q Consensus 37 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~ 112 (151)
|.|+|++|+..|+.+++++|++.+.+. +..+..|.||||+|+..++.+++++|++.|++ ++.++..|.|||++ +
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcC
Confidence 789999999999999999999999887 67799999999999999999999999999999 99999999999998 9
Q ss_pred CHHHHHHHHHhCCCCcccccccCCCccccccc
Q 048410 113 NVDLLYKFLAACPESILQVTIYFPILLPFSSK 144 (151)
Q Consensus 113 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~ 144 (151)
+.++++.|+. .|++++.++..|.||+|+|..
T Consensus 85 ~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 85 HVSCVKLLLS-KGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp CHHHHHHHHH-TTCCTTCCCTTSCCHHHHCCC
T ss_pred CHHHHHHHHH-cCCCCCCcCCCCCCHHHHhCC
Confidence 9999976666 588999999999999999854
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=3.6e-23 Score=128.88 Aligned_cols=104 Identities=21% Similarity=0.305 Sum_probs=89.2
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCC-CCCCcHHHHHHh
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQN-QYGFSPLHLALQ 80 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~L~~a~~ 80 (151)
.||||.|++.|+.++++.|++ +.++ +..+. .|.||||+|+..|+.+++++|++.++++ +..+ ..|.||||+|+.
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~--~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE-DRDV-DAVDE--NGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHh
Confidence 478999999999999999998 6665 44443 4899999999999999999999998887 4445 889999999999
Q ss_pred cCCHHHHHHHHhhccccccccCCCCCCcccc
Q 048410 81 NSHTQMVLRLIDVDRNLVRVQGREGVTPLHY 111 (151)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~ 111 (151)
.|+.+++++|++.|++ ++.++..|.||+++
T Consensus 120 ~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~ 149 (183)
T 3deo_A 120 YVRPEVVEALVELGAD-IEVEDERGLTALEL 149 (183)
T ss_dssp TTCHHHHHHHHHHTCC-TTCCCTTSCCHHHH
T ss_pred cCcHHHHHHHHHcCCC-CcCCCCCCCCHHHH
Confidence 9999999999999988 88999999999886
No 93
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.6e-23 Score=124.70 Aligned_cols=108 Identities=21% Similarity=0.280 Sum_probs=99.9
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----c
Q 048410 37 VDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----G 112 (151)
Q Consensus 37 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~ 112 (151)
+.||||+|+..|+.+++++|++.+.+. +..|..|.||||+|+..++.+++++|++.|++ ++..+..|.|||+. +
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcC
Confidence 689999999999999999999999887 67789999999999999999999999999999 99999999999998 9
Q ss_pred CHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 113 NVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 113 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
+.+++++|+. .|++++.+|..|.||+|+|+++.+
T Consensus 92 ~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~ 125 (136)
T 2jab_A 92 HLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGN 125 (136)
T ss_dssp CHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCC
Confidence 9999976666 588999999999999999998754
No 94
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=5.3e-24 Score=126.74 Aligned_cols=108 Identities=15% Similarity=0.174 Sum_probs=99.3
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCC-CCCcccc---
Q 048410 36 FVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGRE-GVTPLHY--- 111 (151)
Q Consensus 36 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~t~l~~--- 111 (151)
.|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+. ++.+++++|++.|++ ++.++.. |.|||++
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~t~L~~A~~ 87 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLTRPVHDAAR 87 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTBCHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCCCHHHHHHH
Confidence 4899999999999999999999999887 6778999999999999 999999999999999 9999999 9999998
Q ss_pred -cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 112 -GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 112 -~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
++.+++++|+. .|++++.++..|.||+|+|+++..
T Consensus 88 ~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~ 123 (136)
T 1d9s_A 88 EGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGH 123 (136)
T ss_dssp HTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTC
T ss_pred cCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCC
Confidence 99999966665 688999999999999999997653
No 95
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.3e-22 Score=113.15 Aligned_cols=91 Identities=27% Similarity=0.413 Sum_probs=79.5
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.||||.|+..|+.+++++|++.|.++ +.++. .|.||||+|+..++.+++++|++.++++ +.+|..|.||||+|+..
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~--~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDK--NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC-cccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 47999999999999999999999876 44453 4899999999999999999999998887 67788999999999999
Q ss_pred CCHHHHHHHHhhccc
Q 048410 82 SHTQMVLRLIDVDRN 96 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~ 96 (151)
|+.+++++|++.|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999988763
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=1e-22 Score=132.19 Aligned_cols=104 Identities=21% Similarity=0.305 Sum_probs=93.4
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCC-CCCCcHHHHHHh
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQN-QYGFSPLHLALQ 80 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~L~~a~~ 80 (151)
.||||.|++.|+.++++.|++ +.++ +..+. .|.||||+|+..|+.+++++|++.++++ +..+ ..|.||||+|+.
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE-DRDV-DAVDE--NGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCT--TSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCC--CCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHH
Confidence 489999999999999999999 7665 44553 4999999999999999999999999988 4445 889999999999
Q ss_pred cCCHHHHHHHHhhccccccccCCCCCCcccc
Q 048410 81 NSHTQMVLRLIDVDRNLVRVQGREGVTPLHY 111 (151)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~ 111 (151)
.|+.+++++|++.|++ ++.++..|.|||++
T Consensus 121 ~g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~ 150 (244)
T 3ui2_A 121 YVRPEVVEALVELGAD-IEVEDERGLTALEL 150 (244)
T ss_dssp TTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred cCCHHHHHHHHHCCCC-CCCCCCCCCcHHHH
Confidence 9999999999999999 99999999999886
No 97
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.6e-22 Score=118.38 Aligned_cols=108 Identities=25% Similarity=0.417 Sum_probs=99.5
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----c
Q 048410 37 VDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----G 112 (151)
Q Consensus 37 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~ 112 (151)
|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..++.+++++|++.|++ ++..+..|.|||+. +
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHcC
Confidence 889999999999999999999999887 66788999999999999999999999999999 89999999999998 8
Q ss_pred CHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 113 NVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 113 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
+.+++++|+. .|++++.++..|.||+++|+++..
T Consensus 80 ~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~ 113 (126)
T 1n0r_A 80 HLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGH 113 (126)
T ss_dssp CHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred hHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCc
Confidence 9999976666 588999999999999999998654
No 98
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=1.3e-23 Score=131.24 Aligned_cols=116 Identities=9% Similarity=-0.025 Sum_probs=100.4
Q ss_pred CHHHHHHHHcCCH----HHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCC------HHHHHHHHHhCCCccccCCCCC
Q 048410 2 SHYVILAAQAGNV----DALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGH------VNFALEIMRLKPSFARKQNQYG 71 (151)
Q Consensus 2 ~~~l~~a~~~g~~----~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~~~ 71 (151)
.||||.|+..|+. +++++|++.|+++ +.++. .|.||||+|+..++ .+++++|++.|+++ +.+|..|
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~--~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g 114 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINKGADI-KSRTK--EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYKPY 114 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCT--TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGG
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCC--CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCc
Confidence 4899999999985 4899999999987 55553 49999999999986 57899999999998 7789999
Q ss_pred C-cHHHHHHhcC-----CHHHHHHHHh-hccccccccCCCCCCcccc----cCHHHHHHHHH
Q 048410 72 F-SPLHLALQNS-----HTQMVLRLID-VDRNLVRVQGREGVTPLHY----GNVDLLYKFLA 122 (151)
Q Consensus 72 ~-t~L~~a~~~~-----~~~~~~~ll~-~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~ 122 (151)
. ||||+|+..+ +.+++++|++ .|++ ++.+|..|.|||++ ++.++++.|+.
T Consensus 115 ~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad-~~~~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-LLIKDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp TBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-TTCCCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred CchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9 9999999854 3568999999 8999 99999999999998 88888865554
No 99
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=7.7e-23 Score=124.34 Aligned_cols=108 Identities=16% Similarity=0.171 Sum_probs=98.6
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCC-cccc---
Q 048410 36 FVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVT-PLHY--- 111 (151)
Q Consensus 36 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t-~l~~--- 111 (151)
.|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+ .|+.+++++|++.|++ ++.++..|.| |||+
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPVHDAAR 87 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHHHHHHH
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHH
Confidence 3899999999999999999999998887 677899999999985 8999999999999999 9999999999 9998
Q ss_pred -cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 112 -GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 112 -~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
++.+++++|+.. |++++.++..|.||||+|+++..
T Consensus 88 ~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~ 123 (156)
T 1bi7_B 88 EGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGH 123 (156)
T ss_dssp HTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTC
T ss_pred CCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCH
Confidence 999999777765 88999999999999999987653
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=1.2e-22 Score=126.58 Aligned_cols=105 Identities=14% Similarity=0.146 Sum_probs=96.8
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccC-CCCCCcccc----
Q 048410 37 VDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQG-REGVTPLHY---- 111 (151)
Q Consensus 37 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~---- 111 (151)
|.||||+|+..|+.++++.|++ +.++ +..|..|.||||+|+..|+.+++++|++.|++ ++..+ ..|.||||+
T Consensus 44 g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 44 YETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHhc
Confidence 7899999999999999999999 7766 67899999999999999999999999999999 88888 889999998
Q ss_pred cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 112 GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 112 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
++.++++.|+.. |++++.+|..|.||+|+|+++
T Consensus 121 ~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 121 VRPEVVEALVEL-GADIEVEDERGLTALELAREI 153 (183)
T ss_dssp TCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHH
T ss_pred CcHHHHHHHHHc-CCCCcCCCCCCCCHHHHHHHh
Confidence 999999777765 789999999999999999875
No 101
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=1.9e-22 Score=116.68 Aligned_cols=99 Identities=25% Similarity=0.349 Sum_probs=51.2
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----c
Q 048410 37 VDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----G 112 (151)
Q Consensus 37 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~ 112 (151)
|.||||+|+..++.+++++|++.+.+. +..|..|.||||+|+..++.+++++|++.|++ ++.++..|.|||++ +
T Consensus 9 g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~~A~~~~ 86 (115)
T 2l6b_A 9 GNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEHLAKKNG 86 (115)
T ss_dssp SCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTHHHHTTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHCC
Confidence 555555555555555555555555444 34455555555555555555555555555555 55555555555554 4
Q ss_pred CHHHHHHHHHhCCCCcccccccCCCc
Q 048410 113 NVDLLYKFLAACPESILQVTIYFPIL 138 (151)
Q Consensus 113 ~~~~~~~ll~~~~~~~~~~~~~g~t~ 138 (151)
+.+++++|+ ..|++++.++..|.+|
T Consensus 87 ~~~~~~~Ll-~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 87 HHEIVKLLD-AKGADVNARSWGSSHH 111 (115)
T ss_dssp CHHHHHHHH-TTSSSHHHHSCCCC--
T ss_pred CHHHHHHHH-HcCCCCCcCCcccccc
Confidence 555553333 3355555555555544
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=3.6e-22 Score=127.74 Aligned_cols=106 Identities=23% Similarity=0.291 Sum_probs=98.5
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhh-ccccccccCCCCCCcccc----
Q 048410 37 VDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDV-DRNLVRVQGREGVTPLHY---- 111 (151)
Q Consensus 37 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t~l~~---- 111 (151)
|.||||+|+..|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++. |++ ++.++..|.|||++
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL~~A~~~ 150 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTALHAAAWK 150 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHHHHHHHH
T ss_pred cccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHHHHHHHc
Confidence 789999999999999999999999887 67799999999999999999999999998 788 99999999999998
Q ss_pred cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 112 GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 112 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
++.++++.|+.. |++++.++..|.||+++|+..
T Consensus 151 ~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 151 GYADIVQLLLAK-GARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp TCHHHHHHHHHH-TCCSCCCCTTSCCHHHHCCSH
T ss_pred CCHHHHHHHHHc-CCCCccccCCCCCHHHHhcch
Confidence 999999777775 899999999999999998864
No 103
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=8.1e-23 Score=137.78 Aligned_cols=116 Identities=16% Similarity=0.091 Sum_probs=95.6
Q ss_pred HHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCC-
Q 048410 5 VILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSH- 83 (151)
Q Consensus 5 l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~- 83 (151)
.|.|+..+..++++.|++.|.++....+. .|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~--~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~ 177 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDE--HGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNN 177 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCST--TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHH
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCC--CCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhccc
Confidence 35666667778888888888887442453 4999999999999999999999999988 6789999999999999998
Q ss_pred --HHHHHHHHhhccccccccCCCCCCcccc--------cCHHHHHHHHHh
Q 048410 84 --TQMVLRLIDVDRNLVRVQGREGVTPLHY--------GNVDLLYKFLAA 123 (151)
Q Consensus 84 --~~~~~~ll~~~~~~~~~~~~~~~t~l~~--------~~~~~~~~ll~~ 123 (151)
.++++.|++.+...++..+..|.||||+ ++.++++.|+..
T Consensus 178 ~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 178 YDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp HHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 6778888888633489999999999997 488999887765
No 104
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=8.5e-24 Score=144.67 Aligned_cols=136 Identities=18% Similarity=0.182 Sum_probs=102.3
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCcc--ccCCCCCCcHHHHHH
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFA--RKQNQYGFSPLHLAL 79 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~--~~~~~~~~t~L~~a~ 79 (151)
+||||.|++.|+.++|++|++.+............+.||||+|+..|+.+++++|++.+++.. +..+.. .||||+|+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa 171 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHH
Confidence 389999999999999999999987211100000125689999999999999999999986421 222223 89999999
Q ss_pred hcCCHHHHHHHHhhccccccc--cCCCCCCcccc-----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 80 QNSHTQMVLRLIDVDRNLVRV--QGREGVTPLHY-----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 80 ~~~~~~~~~~ll~~~~~~~~~--~~~~~~t~l~~-----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
..|+.+++++|++.|++ ++. .+..|.|||+. |+.+++++|+. .|+ .|.||+++|++++.
T Consensus 172 ~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~-~ga-------~~~taL~~Aa~~g~ 237 (376)
T 2aja_A 172 ENGHLHVLNRLCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLD-CPV-------MLAYAEIHEFEYGE 237 (376)
T ss_dssp HTTCHHHHHHHHHSCGG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT-SHH-------HHHHHHHCTTTTTT
T ss_pred HCCCHHHHHHHHHcCCc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHh-CCC-------ccchHHHHHHHCCC
Confidence 99999999999999988 666 77888999986 78999977776 442 37889999887754
No 105
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=5.3e-22 Score=128.81 Aligned_cols=105 Identities=14% Similarity=0.145 Sum_probs=96.0
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccC-CCCCCcccc----
Q 048410 37 VDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQG-REGVTPLHY---- 111 (151)
Q Consensus 37 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~---- 111 (151)
|.||||+|+..|+.++++.|++ +.++ +..|..|.||||+|+..|+.+++++|++.|++ ++..+ ..|.||||+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHHc
Confidence 7899999999999999999999 7766 67799999999999999999999999999999 88888 789999998
Q ss_pred cCHHHHHHHHHhCCCCcccccccCCCcccccccc
Q 048410 112 GNVDLLYKFLAACPESILQVTIYFPILLPFSSKF 145 (151)
Q Consensus 112 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~ 145 (151)
++.++++.|+. .|++++.++..|.||+|+|++.
T Consensus 122 g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 122 VRPEVVEALVE-LGADIEVEDERGLTALELAREI 154 (244)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHH
Confidence 99999966665 5899999999999999999864
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=5.5e-21 Score=106.51 Aligned_cols=87 Identities=31% Similarity=0.555 Sum_probs=79.7
Q ss_pred CCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----c
Q 048410 37 VDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----G 112 (151)
Q Consensus 37 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~ 112 (151)
|.||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..++.+++++|++.|++ ++.++..|.|||++ +
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcC
Confidence 789999999999999999999999887 67799999999999999999999999999999 99999999999998 8
Q ss_pred CHHHHHHHHHhCCC
Q 048410 113 NVDLLYKFLAACPE 126 (151)
Q Consensus 113 ~~~~~~~ll~~~~~ 126 (151)
+.+++++|+.. |+
T Consensus 80 ~~~~~~~Ll~~-ga 92 (93)
T 1n0q_A 80 HLEVVKLLLEA-GA 92 (93)
T ss_dssp CHHHHHHHHHT-TC
T ss_pred CHHHHHHHHHc-CC
Confidence 99999777654 44
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=4.2e-21 Score=110.96 Aligned_cols=103 Identities=22% Similarity=0.287 Sum_probs=92.0
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhc
Q 048410 2 SHYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQN 81 (151)
Q Consensus 2 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~ 81 (151)
.|+||.|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.+++. +..+..|.|||++|+..
T Consensus 10 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~--~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A~~~ 85 (115)
T 2l6b_A 10 NTPLHNAAKNGHAEEVKKLLSKGADV-NARSK--DGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLAKKN 85 (115)
T ss_dssp CCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCS--SSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC--CCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHC
Confidence 47999999999999999999999886 44453 4899999999999999999999999887 67789999999999999
Q ss_pred CCHHHHHHHHhhccccccccCCCCCCcc
Q 048410 82 SHTQMVLRLIDVDRNLVRVQGREGVTPL 109 (151)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~~~~~t~l 109 (151)
++.+++++|++.|++ ++..+..+.+|-
T Consensus 86 ~~~~~~~~Ll~~ga~-~n~~~~~~~~~~ 112 (115)
T 2l6b_A 86 GHHEIVKLLDAKGAD-VNARSWGSSHHH 112 (115)
T ss_dssp TCHHHHHHHHTTSSS-HHHHSCCCC---
T ss_pred CCHHHHHHHHHcCCC-CCcCCccccccc
Confidence 999999999999999 999999998874
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=1.5e-19 Score=123.32 Aligned_cols=108 Identities=18% Similarity=0.077 Sum_probs=97.7
Q ss_pred CCchHHHHHhc-CCHHHHHHHHHhCCCccccCC--CCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc--
Q 048410 37 VDTPLHIAASM-GHVNFALEIMRLKPSFARKQN--QYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY-- 111 (151)
Q Consensus 37 ~~t~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~--~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~-- 111 (151)
+.++||.|+.. ++.++++.|++.|+++ +..+ ..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLHHAT 276 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH
Confidence 35799999999 9999999999999888 5556 7899999999999999999999999999 99999999999998
Q ss_pred --cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 112 --GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 112 --~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
++.+++++|+. .|++++.+|..|.||||+|+....
T Consensus 277 ~~g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~ 313 (368)
T 3jue_A 277 ILGHTGLACLFLK-RGADLGARDSEGRDPLTIAMETAN 313 (368)
T ss_dssp HHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HcCcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCC
Confidence 99999966665 589999999999999999987653
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=4.3e-19 Score=125.60 Aligned_cols=107 Identities=21% Similarity=0.152 Sum_probs=96.1
Q ss_pred CchHHHHHhcCCHHHHHHHHHhCCCccccC------CCCCCcHHHHHHh---cCCHHHHHHHHhhccccccccCCCCCCc
Q 048410 38 DTPLHIAASMGHVNFALEIMRLKPSFARKQ------NQYGFSPLHLALQ---NSHTQMVLRLIDVDRNLVRVQGREGVTP 108 (151)
Q Consensus 38 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~------~~~~~t~L~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~t~ 108 (151)
.+.|+.|+..|+.+.++.|++.|+++ +.. +..|.||||+|+. .|+.+++++|++.|++ ++.+|..|.||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~Tp 210 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTA 210 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSCCH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCCcH
Confidence 46799999999999999999999887 444 7789999999976 8999999999999999 99999999999
Q ss_pred ccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 109 LHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 109 l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
||+ ++.++++.|+. .|++++.+|..|.||||+|+++..
T Consensus 211 Lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~ 252 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHH 252 (497)
T ss_dssp HHHHTTTTCHHHHHHHHH-TCCCCSCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCC
Confidence 998 99999966655 689999999999999999987653
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.80 E-value=2e-21 Score=132.98 Aligned_cols=128 Identities=15% Similarity=0.075 Sum_probs=100.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhh--hhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccc-cCCCCCCcHHHHHH
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLL--DQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFAR-KQNQYGFSPLHLAL 79 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~--~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~-~~~~~~~t~L~~a~ 79 (151)
||||.|+..|+.++|++|++.|++.. ..... +.||||+|+..|+.+++++|++.|++... ..+..|.||||+|+
T Consensus 130 tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~---~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa 206 (376)
T 2aja_A 130 QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE---NYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA 206 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHH---HHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccccCCC---CCCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHH
Confidence 69999999999999999999997421 11111 26999999999999999999999987622 15778999999999
Q ss_pred -hcCCHHHHHHHHhhccccccccCCCCCCcccc----cCHHHHHHHHHhCCCCcccccccCCCccccccccC
Q 048410 80 -QNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFS 146 (151)
Q Consensus 80 -~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 146 (151)
..|+.+++++|++.|+. +.||++. ++.+++++|+. .|++++.++ ++++.|++++
T Consensus 207 ~~~G~~eiv~~Ll~~ga~--------~~taL~~Aa~~g~~evv~lL~~-~ga~~~~~~----~~l~~A~~~g 265 (376)
T 2aja_A 207 VGRGHHNVINFLLDCPVM--------LAYAEIHEFEYGEKYVNPFIAR-HVNRLKEMH----DAFKLSNPDG 265 (376)
T ss_dssp STTCCHHHHHHHTTSHHH--------HHHHHHCTTTTTTTTHHHHHHH-HHHHHHHHH----TTTTTTSSSS
T ss_pred HHCCCHHHHHHHHhCCCc--------cchHHHHHHHCCCHHHHHHHHh-cCccccccc----HHHHHHHHCC
Confidence 99999999999996643 7899988 88898866655 466665544 3556655543
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=9.6e-19 Score=100.33 Aligned_cols=84 Identities=24% Similarity=0.374 Sum_probs=51.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHhChhhhhhhcCCCCCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcC
Q 048410 3 HYVILAAQAGNVDALYELIWEDAYLLDQIDRVPFVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNS 82 (151)
Q Consensus 3 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~ 82 (151)
++||.|+..|+.+++++|++.+.++ +..+. .|.||||+|+..++.+++++|++.+++. +..|..|.||||+|+..+
T Consensus 26 t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~--~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~ 101 (110)
T 2zgd_A 26 KKLLEAARAGQDDEVRILMANGADV-AAKDK--NGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDISIDNG 101 (110)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT--TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCCC-CccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHHHHHcC
Confidence 5666666666666666666666554 33332 2666666666666666666666666554 445666666666666666
Q ss_pred CHHHHHHH
Q 048410 83 HTQMVLRL 90 (151)
Q Consensus 83 ~~~~~~~l 90 (151)
+.+++++|
T Consensus 102 ~~~~~~~L 109 (110)
T 2zgd_A 102 NEDLAEIL 109 (110)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 66666554
No 112
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.80 E-value=4.8e-19 Score=118.14 Aligned_cols=108 Identities=20% Similarity=0.145 Sum_probs=96.2
Q ss_pred CchHHHHHhcCCHHHHHHHHHhCCCcccc-----CCCCCCcHHHHHHhc---CCHHHHHHHHhhccccccccCCCCCCcc
Q 048410 38 DTPLHIAASMGHVNFALEIMRLKPSFARK-----QNQYGFSPLHLALQN---SHTQMVLRLIDVDRNLVRVQGREGVTPL 109 (151)
Q Consensus 38 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~-----~~~~~~t~L~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~t~l 109 (151)
.++|+.|+..++.+.++.++..+.++... .+..|.||||+|+.. ++.+++++|++.|++ ++.++..|.|||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~TpL 230 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTAL 230 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCCCHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCCCHH
Confidence 35699999999999999999999887332 588899999999997 899999999999999 999999999999
Q ss_pred cc----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 110 HY----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 110 ~~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
|+ ++.++++.|+. .|++++.+|..|.||||+|+++..
T Consensus 231 h~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~ 271 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHH 271 (301)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCCSCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCC
Confidence 98 99999966665 689999999999999999997653
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=4.8e-19 Score=116.94 Aligned_cols=107 Identities=21% Similarity=0.175 Sum_probs=95.9
Q ss_pred chHHHHHhcCCHHHHHHHHHhCCCcc-----ccCCCCCCcHHHHHHhc---CCHHHHHHHHhhccccccccCCCCCCccc
Q 048410 39 TPLHIAASMGHVNFALEIMRLKPSFA-----RKQNQYGFSPLHLALQN---SHTQMVLRLIDVDRNLVRVQGREGVTPLH 110 (151)
Q Consensus 39 t~l~~a~~~~~~~~~~~ll~~~~~~~-----~~~~~~~~t~L~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~t~l~ 110 (151)
++|+.|+..+..+.++.++..+.+.. +..+..|.||||+|+.. ++.+++++|++.|++ ++.+|..|.||||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpLh 210 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHHH
Confidence 58899999999999999999998752 33478899999999999 899999999999999 9999999999999
Q ss_pred c----cCHHHHHHHHHhCCCCcccccccCCCccccccccCC
Q 048410 111 Y----GNVDLLYKFLAACPESILQVTIYFPILLPFSSKFSP 147 (151)
Q Consensus 111 ~----~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 147 (151)
+ ++.++++.|+. .|++++.+|..|.||||+|+++..
T Consensus 211 ~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~ 250 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKH 250 (278)
T ss_dssp HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCC
Confidence 8 99999966665 789999999999999999998653
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=5.4e-18 Score=97.18 Aligned_cols=83 Identities=28% Similarity=0.340 Sum_probs=76.3
Q ss_pred CCCchHHHHHhcCCHHHHHHHHHhCCCccccCCCCCCcHHHHHHhcCCHHHHHHHHhhccccccccCCCCCCcccc----
Q 048410 36 FVDTPLHIAASMGHVNFALEIMRLKPSFARKQNQYGFSPLHLALQNSHTQMVLRLIDVDRNLVRVQGREGVTPLHY---- 111 (151)
Q Consensus 36 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~---- 111 (151)
.|.|+||+|+..|+.+++++|++.+++. +..|..|.||||+|+..|+.+++++|++.|++ ++.++..|.|||++
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~ 100 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFDISIDN 100 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcHHHHHHHc
Confidence 3889999999999999999999998887 67789999999999999999999999999999 99999999999998
Q ss_pred cCHHHHHHH
Q 048410 112 GNVDLLYKF 120 (151)
Q Consensus 112 ~~~~~~~~l 120 (151)
++.++++.|
T Consensus 101 ~~~~~~~~L 109 (110)
T 2zgd_A 101 GNEDLAEIL 109 (110)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 888888543
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=80.77 E-value=1.6 Score=19.19 Aligned_cols=18 Identities=28% Similarity=0.303 Sum_probs=13.6
Q ss_pred HHHHHHHcCCHHHHHHHH
Q 048410 4 YVILAAQAGNVDALYELI 21 (151)
Q Consensus 4 ~l~~a~~~g~~~~v~~ll 21 (151)
-+..||..|+++.++.|-
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 357788888888887764
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=44.89 E-value=80 Score=22.33 Aligned_cols=51 Identities=10% Similarity=0.110 Sum_probs=36.0
Q ss_pred HHHcCCHHHHHHHHHhChhhh-----------hhhcCCCCCCchHHHHHhcCCHHHHHHHHH
Q 048410 8 AAQAGNVDALYELIWEDAYLL-----------DQIDRVPFVDTPLHIAASMGHVNFALEIMR 58 (151)
Q Consensus 8 a~~~g~~~~v~~ll~~~~~~~-----------~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~ 58 (151)
.+..|+...|+..+..|.++. +..+....|.|.+|+|.+..+.+++..|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 345689999999998887652 111112247888888888888888877776
Done!