BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048416
(495 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91W34|CP058_MOUSE UPF0420 protein C16orf58 homolog OS=Mus musculus PE=2 SV=1
Length = 466
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 188/386 (48%), Gaps = 24/386 (6%)
Query: 72 LVEDQFVDSSLRLICSEDIDG-------RRWNYVAERDRSGKFKRNSIRAISLQSPQAPA 124
L +QF + R CS DG RRW +++ + A P A A
Sbjct: 11 LCTEQFGSGAPR-GCSAAADGSLQWDGARRWGWLSR----APIAKPGQHAGGGGGPWA-A 64
Query: 125 EELMSFIRSYVVPDGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGVSRNRA 184
+S +RS ++P GFPDSV+P Y+PY W +++ F G TQ +L +GV +A
Sbjct: 65 LTALSGLRSVLLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKA 124
Query: 185 TPGAVAINWILKDGAGRVGKMIFA-RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVP 243
+ A W++KD G +G++I A +G K D + KQ R D+L ++ +E+ P
Sbjct: 125 SVSAATSTWLVKDSTGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYP 184
Query: 244 HLFLPLACAANVAKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKG---ECVGNIADLLGT 300
F +N+AK + V +TR + A+ N+ DV+AK E V N+A LL +
Sbjct: 185 IFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVS 244
Query: 301 GLSIMISKRNPSL-ITTFALLSCGYVFSSYQEVKSVVLHTLNRARFSVAVESFLKTGHVP 359
L + + PSL + F LL+ +++++Y+ V+++VL TLN +R + +E FL+ G V
Sbjct: 245 LLMLPLVSDCPSLSLGCFVLLTALHIYANYRAVRALVLETLNESRLQLVLEHFLQRGEVL 304
Query: 360 SLREGNLQENIFSFPWLRDKPVVLGSRFKDAFQDPDAYLAVEPFFE--KERYVVTYNPSK 417
N E +++ W P + S + ++ E E Y++ +N S+
Sbjct: 305 EPASANQMEPLWTGFW----PSLSLSLGVPLHHLVSSVSELKQLVEGHHEPYLLCWNKSR 360
Query: 418 GKVYALLKDQAKSDDILKAAFHAYVL 443
+V L +A + +L+AA H +L
Sbjct: 361 NQVQVALSQEAGPETVLRAATHGLIL 386
>sp|Q499P8|CP058_RAT UPF0420 protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 466
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 188/393 (47%), Gaps = 24/393 (6%)
Query: 66 ETTAFR--LVEDQFVDSSLRLICSEDIDGR-RWNYVAERDRSGKFKRNSIRAISLQS--- 119
+T + R L +QF + R CS DG +W+ R G F R SI
Sbjct: 3 DTASLRAPLCTEQFGSGAPR-SCSAAADGSLQWDRA---QRWGWFSRASITKPGQHEGGG 58
Query: 120 --PQAPAEELMSFIRSYVVPDGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLNSV 177
P A A +S +RS ++P GFPDSV+P Y+ Y W +++ F G TQ +L +
Sbjct: 59 RGPWA-ALTTLSGLRSVLLPQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGL 117
Query: 178 GVSRNRATPGAVAINWILKDGAGRVGKMIFA-RQGKKFDYDLKQLRFAGDLLMELGAGVE 236
GV +A+ A W++KD G +G++IFA +G K D + KQ R D+L + +E
Sbjct: 118 GVGNAKASVSAATSTWLVKDSTGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLE 177
Query: 237 LATAAVPHLFLPLACAANVAKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIAD 296
+ P F +N+AK + V +TR + A+ N+ DV+AK + +
Sbjct: 178 IMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVN 237
Query: 297 LLGTGLSIMISKRNPSLIT----TFALLSCGYVFSSYQEVKSVVLHTLNRARFSVAVESF 352
L G +S+++ ++ F LL+ +++++Y+ V+++VL TLN +R + ++ F
Sbjct: 238 LAGLLVSLLMLPLVSDCLSLSLGCFILLTALHIYANYRAVRALVLETLNESRLQLVLKHF 297
Query: 353 LKTGHVPSLREGNLQENIFSFPWLRDKPVVLGSRFKDAFQDPDAYLAVEPFFE--KERYV 410
L+ G V N E +++ W P + S + ++ E +E Y+
Sbjct: 298 LQRGEVLEPASANQMEPLWTGFW----PSLSLSLGVPLHHLVSSVSELKQLVEGHQEPYL 353
Query: 411 VTYNPSKGKVYALLKDQAKSDDILKAAFHAYVL 443
+ +N S+ +V L A + +L+AA H +L
Sbjct: 354 LCWNQSQNQVQVALSQVAGPETVLRAATHGLIL 386
>sp|Q5R8F6|CP058_PONAB UPF0420 protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1
Length = 468
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 181/362 (50%), Gaps = 15/362 (4%)
Query: 89 DIDGRRWNYVAERDRSGKFKRNSIRAISLQSPQAPAEELMSFIRSYVVPDGFPDSVTPSY 148
++ G RW ++ R+ K + + +P AP+ L S +++ +P GFPDSV+P Y
Sbjct: 35 EVGGWRWWGLS---RAFTVKPEGRDSGEVGAPGAPSPPL-SGLQAVFLPQGFPDSVSPDY 90
Query: 149 VPYMTWRALKHFFGGAMGVFTTQTLLNSVGVSRNRATPGAVAINWILKDGAGRVGKMIFA 208
+PY W +++ F G G TQ +L +GV +AT A W++KD G +G+++FA
Sbjct: 91 LPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGRIVFA 150
Query: 209 -RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVAKNVAAVTSTST 267
+G K D + KQ R D+L ++ +E+ P F +N+AK + +V +T
Sbjct: 151 WWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGAT 210
Query: 268 RTPIYKAFAKGENIGDVTAKGECVGNIADLLG----TGLSIMISKRNPSLITTFALLSCG 323
R + A+ N+ DV+AK + +L+G + ++S + F L+
Sbjct: 211 RAALTVHQARRNNMADVSAKDSSQETLVNLVGLLVSLLMLPLVSGCPGFSLGCFFFLTAL 270
Query: 324 YVFSSYQEVKSVVLHTLNRARFSVAVESFLKTGHVPSLREGNLQENIFSFPWLRDKPVVL 383
+++++Y+ V+++V+ TLN R + ++ +L+ G V + N E +++ W P
Sbjct: 271 HIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVLNPTAANRMEPLWTGFW----PAPS 326
Query: 384 GSRFKDAFQDPDAYLAVEPFFE--KERYVVTYNPSKGKVYALLKDQAKSDDILKAAFHAY 441
S + + ++ E +E Y++ ++ S+ +V +L +A IL+AA H
Sbjct: 327 LSLGVPLHRLVSSVFELQQLVEGHQEPYLLCWDQSRNQVQVVLNQKAGPKTILRAATHGL 386
Query: 442 VL 443
+L
Sbjct: 387 ML 388
>sp|Q86K80|U420_DICDI UPF0420 protein OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3
SV=1
Length = 527
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 149/298 (50%), Gaps = 26/298 (8%)
Query: 96 NYVAERDRSGKFKRNSIRAISLQSPQAPAEELMSFIRS-------------YVVPDGFPD 142
N + E+++S I + SP ++ ++F+ + +P+G+PD
Sbjct: 15 NCIIEKNQSNSI----INKFQVASPYDDYDDRLNFLETIEKNSGFYNVLCELFLPNGYPD 70
Query: 143 SVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGVSRNRATPGAVAINWILKDGAGRV 202
SVT Y Y W +++ G T+ +L GV + AT + W+++DG G +
Sbjct: 71 SVTTDYFGYQFWDSIQALCSTITGTLATRAILKGYGVGDSSATVASATTQWLIRDGMGMI 130
Query: 203 GKMIFA-RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAV-PHLFLPLACAANVAKNVA 260
G+++FA R+G D + K+ R+ D+L +G E+ + LFLPL+C +AK++
Sbjct: 131 GRIVFAWRKGTDLDCNSKKWRYTADILNNIGMAFEMISPLFSSQLFLPLSCIGLIAKSIC 190
Query: 261 AVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMIS---KRNPSLITT- 316
V T+ + + FAK +N+ DV+AK +L+G LS+++S N SLI T
Sbjct: 191 GVAGGCTKASLTQHFAKRDNLADVSAKDGSQETAVNLVGMLLSVIVSSFINDNTSLIVTW 250
Query: 317 --FALLSCGYVFSSYQEVKSVVLHTLNRARFSVAVESFLKT-GHVPSLREGNLQENIF 371
F + ++F +Y+ V +V L ++NR R + + F+ G +PS E + ENI
Sbjct: 251 LVFLFFTSLHLFCNYRAVSAVQLKSINRYRAYLIYDYFIHNQGSIPSPSEISKLENIL 308
>sp|Q96GQ5|CP058_HUMAN UPF0420 protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2
Length = 468
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 181/362 (50%), Gaps = 15/362 (4%)
Query: 89 DIDGRRWNYVAERDRSGKFKRNSIRAISLQSPQAPAEELMSFIRSYVVPDGFPDSVTPSY 148
++ G RW ++ R+ K A + + AP+ L S +++ +P GFPDSV+P Y
Sbjct: 35 EVGGWRWWGLS---RAFTVKPEGRDAGEVGASGAPSPPL-SGLQAVFLPQGFPDSVSPDY 90
Query: 149 VPYMTWRALKHFFGGAMGVFTTQTLLNSVGVSRNRATPGAVAINWILKDGAGRVGKMIFA 208
+PY W +++ F G TQ +L +GV +AT A W++KD G +G+++FA
Sbjct: 91 LPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGRIVFA 150
Query: 209 -RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVAKNVAAVTSTST 267
+G K D + KQ R D+L ++ +E+ P F +N+AK + +V +T
Sbjct: 151 WWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGAT 210
Query: 268 RTPIYKAFAKGENIGDVTAKG---ECVGNIADLLGTGLSIMISKRNPSL-ITTFALLSCG 323
R + A+ N+ DV+AK E + N+A LL + L + + P + F L+
Sbjct: 211 RAALTVHQARRNNMADVSAKDSSQETLVNLAGLLVSLLMLPLVSGCPGFSLGCFFFLTAL 270
Query: 324 YVFSSYQEVKSVVLHTLNRARFSVAVESFLKTGHVPSLREGNLQENIFSFPWLRDKPVVL 383
+++++Y+ V+++V+ TLN R + ++ +L+ G V N E +++ W P
Sbjct: 271 HIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVLDPTAANRMEPLWTGFW----PAPS 326
Query: 384 GSRFKDAFQDPDAYLAVEPFFE--KERYVVTYNPSKGKVYALLKDQAKSDDILKAAFHAY 441
S + + ++ E +E Y++ ++ S+ +V +L +A IL+AA H
Sbjct: 327 LSLGVPLHRLVSSVFELQQLVEGHQESYLLCWDQSQNQVQVVLNQKAGPKTILRAATHGL 386
Query: 442 VL 443
+L
Sbjct: 387 ML 388
>sp|Q7Z4Q2|HEAT3_HUMAN HEAT repeat-containing protein 3 OS=Homo sapiens GN=HEATR3 PE=1
SV=2
Length = 680
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 108/266 (40%), Gaps = 33/266 (12%)
Query: 63 ESDETTAFRLVEDQFVDSSLRLICSEDIDGRRWNYVAERDRSGKFKRNSIRAISLQ--SP 120
E ET A + ++ + + C+ED W ++ D S F NS Q SP
Sbjct: 352 ELRETIALLTAQQTALEIIVNMCCNEDPSDDEWEELSSSDESDAFMENSFSECGGQLFSP 411
Query: 121 QAPAEELMSFIRSYVVPD------GFPDSVTPSYVPYM-TWRAL--KHFFGGAMGVFTTQ 171
+ E+ + + +Y++P FP+S+ TW+ L K +F Q
Sbjct: 412 LCLSHEVHTALTNYLIPKKIFEKTAFPNSIAVDLCSRNPTWKPLIRKMNTIQCRALFCLQ 471
Query: 172 TLLNSVGVSRNRATPGAVAINWILKDGAGRVGKMIFARQ--GKKFDYDLKQLRFAGDLLM 229
+L++ + V GA A+ + A + +++F++ K D+ L+ + A L+
Sbjct: 472 SLVSLLDVEH---LGGAAALQTL----AQHLSQLLFSQPDFAKHVDF-LEAISSALRALL 523
Query: 230 ELGAGVELATAAVPHLFLPLACAANVAKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGE 289
+ A ++ P + L A + NV + + I G V AK +
Sbjct: 524 QTMASKNISQCMTPDQLMTLCKAGIHSSNVGVRVNVVSILGIT---------GSVLAKED 574
Query: 290 CVGNIADLLGTGLSIM-ISKRNPSLI 314
G + L G ++ ++ ++PSL+
Sbjct: 575 --GTLETLKNIGCFLLEVTTKDPSLV 598
>sp|O94284|HMT2_SCHPO Sulfide:quinone oxidoreductase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=hmt2 PE=3 SV=1
Length = 459
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 14 NSTAAAASSAAQDARLLVRETMRISANLATSSSPIGVGGGGAAATLLQSESDETTAFRLV 73
NST + + + Q A +L R +T + VGGG A ++ ++ + +R
Sbjct: 5 NSTIKSVTGSFQSASMLARFA-------STHHKVLVVGGGSAGISVAHQIYNKFSKYRFA 57
Query: 74 EDQFVDSSLRLICSEDIDGRRWNY 97
DQ D+SL+ +DG +++Y
Sbjct: 58 NDQGKDTSLKPGEIGIVDGAKYHY 81
>sp|Q8DT90|RNZ_STRMU Ribonuclease Z OS=Streptococcus mutans serotype c (strain ATCC
700610 / UA159) GN=rnz PE=3 SV=1
Length = 309
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 415 PSKGKVYALLKDQAKSDDILKAAFHAYVLLHCINSSNGHRSLALKQHEYDNSN 467
P KGKV +L D K+D ++ A A VL+H S G +LA + N+
Sbjct: 205 PKKGKVITILGDTRKTDASIRLALGADVLVHESTYSKGDENLARRHGHSTNTE 257
>sp|A4XQ48|URED_PSEMY Urease accessory protein UreD OS=Pseudomonas mendocina (strain ymp)
GN=ureD PE=3 SV=1
Length = 278
Score = 32.7 bits (73), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 33/77 (42%), Gaps = 14/77 (18%)
Query: 19 AASSAAQDARLLVRETMRISANLATSSSPIGVGGGGAAATLLQSESDETTAFRLVEDQFV 78
AA +D RLL E R+S SPIG+ G ATLL S V
Sbjct: 165 AALDVRRDGRLLWHERQRVSGGDGLLDSPIGLNGQPVFATLLVSGE-------------V 211
Query: 79 DSSLRLICSE-DIDGRR 94
D+ L C E +IDG R
Sbjct: 212 DNELLERCREVNIDGVR 228
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,012,466
Number of Sequences: 539616
Number of extensions: 7307611
Number of successful extensions: 19751
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 19731
Number of HSP's gapped (non-prelim): 16
length of query: 495
length of database: 191,569,459
effective HSP length: 122
effective length of query: 373
effective length of database: 125,736,307
effective search space: 46899642511
effective search space used: 46899642511
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)